Query 001561
Match_columns 1052
No_of_seqs 1044 out of 6882
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 03:52:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001561.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001561hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 5E-116 1E-120 1131.1 72.4 942 5-1049 1-953 (968)
2 PLN00113 leucine-rich repeat r 100.0 5.3E-59 1.1E-63 600.8 36.3 514 110-666 69-585 (968)
3 KOG1187 Serine/threonine prote 100.0 1.4E-50 3E-55 452.5 27.5 291 757-1049 61-354 (361)
4 KOG0581 Mitogen-activated prot 100.0 1.1E-44 2.4E-49 378.9 20.2 249 773-1042 81-334 (364)
5 KOG0192 Tyrosine kinase specif 100.0 1.3E-43 2.8E-48 392.8 24.3 254 775-1049 45-305 (362)
6 KOG0575 Polo-like serine/threo 100.0 1.3E-43 2.9E-48 391.6 21.5 247 771-1042 18-268 (592)
7 KOG0615 Serine/threonine prote 100.0 2.4E-44 5.1E-49 377.6 14.6 256 770-1046 171-442 (475)
8 KOG0595 Serine/threonine-prote 100.0 5.5E-43 1.2E-47 368.5 20.9 199 770-977 9-216 (429)
9 KOG0197 Tyrosine kinases [Sign 100.0 1.4E-43 3E-48 388.6 14.0 256 772-1049 207-463 (468)
10 KOG0591 NIMA (never in mitosis 100.0 1.5E-43 3.2E-48 353.0 9.7 256 771-1043 19-281 (375)
11 KOG0598 Ribosomal protein S6 k 100.0 2.7E-42 5.9E-47 361.0 16.7 242 770-1035 24-269 (357)
12 KOG0593 Predicted protein kina 100.0 9.7E-42 2.1E-46 343.5 16.6 261 771-1042 2-283 (396)
13 KOG0472 Leucine-rich repeat pr 100.0 3.2E-45 6.8E-50 381.0 -14.5 480 108-642 43-541 (565)
14 KOG0592 3-phosphoinositide-dep 100.0 1.6E-40 3.4E-45 360.3 18.6 252 767-1042 69-337 (604)
15 KOG1026 Nerve growth factor re 100.0 9.4E-41 2E-45 383.5 17.3 262 771-1051 486-766 (774)
16 KOG0659 Cdk activating kinase 100.0 4.1E-40 9E-45 326.8 19.3 261 771-1042 2-280 (318)
17 KOG0582 Ste20-like serine/thre 100.0 9.1E-40 2E-44 346.3 22.0 266 770-1047 25-299 (516)
18 KOG0578 p21-activated serine/t 100.0 1.5E-40 3.2E-45 364.6 14.8 249 771-1042 273-522 (550)
19 KOG0661 MAPK related serine/th 100.0 9.2E-41 2E-45 356.6 12.4 261 770-1042 9-290 (538)
20 KOG0198 MEKK and related serin 100.0 6.1E-40 1.3E-44 351.6 18.4 252 771-1042 17-275 (313)
21 KOG0616 cAMP-dependent protein 100.0 7.2E-40 1.6E-44 329.9 17.6 236 771-1034 44-283 (355)
22 KOG0600 Cdc2-related protein k 100.0 6.7E-40 1.5E-44 352.6 18.4 262 771-1042 117-399 (560)
23 KOG0472 Leucine-rich repeat pr 100.0 1.2E-43 2.7E-48 369.1 -10.5 480 88-624 47-545 (565)
24 KOG4194 Membrane glycoprotein 100.0 1.5E-40 3.2E-45 360.4 9.5 366 138-507 82-451 (873)
25 KOG0597 Serine-threonine prote 100.0 1.8E-39 3.9E-44 351.0 16.3 246 771-1042 2-250 (808)
26 KOG0196 Tyrosine kinase, EPH ( 100.0 1.5E-40 3.2E-45 372.3 7.8 257 772-1050 630-894 (996)
27 KOG0583 Serine/threonine prote 100.0 2.7E-38 5.9E-43 354.3 23.6 250 769-1042 15-274 (370)
28 KOG0605 NDR and related serine 100.0 9.2E-39 2E-43 347.4 18.8 252 769-1042 139-444 (550)
29 KOG2345 Serine/threonine prote 100.0 5.9E-39 1.3E-43 315.4 14.6 265 769-1047 19-300 (302)
30 KOG0588 Serine/threonine prote 100.0 7.5E-39 1.6E-43 354.0 16.8 250 771-1046 12-268 (786)
31 cd05102 PTKc_VEGFR3 Catalytic 100.0 8.1E-38 1.8E-42 355.1 23.6 263 770-1050 6-337 (338)
32 KOG0201 Serine/threonine prote 100.0 2.7E-39 5.8E-44 343.2 10.2 247 772-1042 14-262 (467)
33 KOG4194 Membrane glycoprotein 100.0 2.5E-39 5.4E-44 351.0 8.6 388 209-638 55-448 (873)
34 KOG4721 Serine/threonine prote 100.0 1E-38 2.2E-43 344.6 12.6 240 776-1047 129-368 (904)
35 KOG1095 Protein tyrosine kinas 100.0 8.7E-39 1.9E-43 380.9 13.2 262 770-1050 691-964 (1025)
36 KOG0694 Serine/threonine prote 100.0 9.5E-38 2.1E-42 348.9 19.7 242 770-1037 367-613 (694)
37 KOG0193 Serine/threonine prote 100.0 4.1E-38 8.9E-43 345.6 15.6 260 769-1049 390-655 (678)
38 KOG0580 Serine/threonine prote 100.0 2.8E-38 6E-43 309.6 12.0 247 771-1042 22-272 (281)
39 PHA02988 hypothetical protein; 100.0 2.4E-37 5.2E-42 341.2 20.8 247 776-1048 25-280 (283)
40 KOG0585 Ca2+/calmodulin-depend 100.0 7.7E-38 1.7E-42 333.5 15.7 252 768-1042 94-371 (576)
41 KOG0033 Ca2+/calmodulin-depend 100.0 8.6E-39 1.9E-43 312.5 6.5 250 771-1042 11-266 (355)
42 KOG0194 Protein tyrosine kinas 100.0 9E-38 2E-42 349.3 14.9 255 773-1049 159-422 (474)
43 cd07848 STKc_CDKL5 Catalytic d 100.0 7.2E-37 1.6E-41 339.0 21.4 262 771-1042 1-283 (287)
44 cd05631 STKc_GRK4 Catalytic do 100.0 1.5E-36 3.2E-41 335.8 23.5 255 773-1047 2-267 (285)
45 cd05096 PTKc_DDR1 Catalytic do 100.0 2.8E-36 6.1E-41 337.1 25.9 264 771-1046 5-304 (304)
46 KOG1989 ARK protein kinase fam 100.0 3.9E-37 8.5E-42 356.0 19.4 257 771-1049 37-313 (738)
47 KOG0660 Mitogen-activated prot 100.0 1.3E-37 2.9E-42 324.4 13.6 262 770-1042 21-309 (359)
48 KOG0663 Protein kinase PITSLRE 100.0 2.7E-37 5.9E-42 315.7 15.4 261 771-1042 76-360 (419)
49 cd05064 PTKc_EphR_A10 Catalyti 100.0 7.3E-37 1.6E-41 334.8 20.0 255 771-1047 5-265 (266)
50 KOG0611 Predicted serine/threo 100.0 2.1E-37 4.5E-42 322.0 14.6 245 771-1042 53-302 (668)
51 KOG3653 Transforming growth fa 100.0 1.2E-36 2.7E-41 324.8 20.8 259 773-1047 212-503 (534)
52 cd05104 PTKc_Kit Catalytic dom 100.0 7E-37 1.5E-41 351.0 19.6 260 770-1047 34-374 (375)
53 cd05106 PTKc_CSF-1R Catalytic 100.0 7.3E-37 1.6E-41 350.5 19.6 261 770-1048 37-373 (374)
54 KOG0658 Glycogen synthase kina 100.0 1.7E-37 3.7E-42 324.1 12.5 258 772-1042 25-305 (364)
55 cd05072 PTKc_Lyn Catalytic dom 100.0 3E-36 6.6E-41 329.0 23.0 256 770-1047 5-261 (261)
56 cd06649 PKc_MEK2 Catalytic dom 100.0 2.3E-36 4.9E-41 341.6 22.7 198 771-977 5-204 (331)
57 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.7E-36 8.1E-41 327.3 23.2 252 771-1045 4-256 (256)
58 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.3E-36 2.8E-41 344.1 20.3 252 771-1042 1-256 (333)
59 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.4E-36 3.1E-41 336.4 20.1 261 771-1042 5-284 (288)
60 cd05612 STKc_PRKX_like Catalyt 100.0 1.6E-36 3.4E-41 336.6 19.6 244 771-1042 1-253 (291)
61 KOG0599 Phosphorylase kinase g 100.0 2.3E-37 4.9E-42 306.9 10.7 257 771-1049 17-291 (411)
62 PTZ00267 NIMA-related protein 100.0 5.9E-36 1.3E-40 353.6 24.7 252 772-1042 68-322 (478)
63 cd05068 PTKc_Frk_like Catalyti 100.0 3.7E-36 8.1E-41 328.3 20.9 256 770-1047 5-261 (261)
64 KOG0594 Protein kinase PCTAIRE 100.0 1.8E-36 3.9E-41 317.9 17.3 269 771-1047 11-308 (323)
65 cd05052 PTKc_Abl Catalytic dom 100.0 3.7E-36 7.9E-41 328.7 20.2 255 771-1047 6-262 (263)
66 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.8E-36 3.8E-41 330.9 17.6 257 769-1047 4-261 (261)
67 cd05571 STKc_PKB Catalytic dom 100.0 2.7E-36 5.9E-41 339.7 19.6 241 777-1042 1-250 (323)
68 PTZ00263 protein kinase A cata 100.0 4E-36 8.8E-41 339.1 20.9 244 771-1042 18-270 (329)
69 KOG0589 Serine/threonine prote 100.0 1.1E-36 2.3E-41 333.9 15.0 251 771-1043 4-258 (426)
70 KOG2052 Activin A type IB rece 100.0 5.1E-36 1.1E-40 317.7 19.6 266 769-1049 209-505 (513)
71 cd05094 PTKc_TrkC Catalytic do 100.0 5.6E-36 1.2E-40 332.4 20.7 262 771-1051 5-286 (291)
72 cd08228 STKc_Nek6 Catalytic do 100.0 2.1E-35 4.5E-40 323.6 24.5 261 771-1048 2-266 (267)
73 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.9E-36 1.1E-40 340.7 20.1 267 772-1049 1-298 (338)
74 cd05048 PTKc_Ror Catalytic Dom 100.0 6.6E-36 1.4E-40 330.6 20.6 258 771-1047 5-283 (283)
75 KOG1094 Discoidin domain recep 100.0 9.6E-37 2.1E-41 331.2 13.3 264 771-1048 538-805 (807)
76 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.4E-35 3.1E-40 331.1 23.3 269 770-1048 4-295 (303)
77 cd05093 PTKc_TrkB Catalytic do 100.0 6.2E-36 1.4E-40 331.5 20.1 261 770-1049 4-281 (288)
78 cd06650 PKc_MEK1 Catalytic dom 100.0 1.9E-35 4.1E-40 334.0 24.3 199 770-977 4-204 (333)
79 cd05033 PTKc_EphR Catalytic do 100.0 1.1E-35 2.4E-40 325.5 21.7 255 771-1047 4-265 (266)
80 cd05105 PTKc_PDGFR_alpha Catal 100.0 7.7E-36 1.7E-40 343.0 21.0 262 770-1049 36-399 (400)
81 KOG0610 Putative serine/threon 100.0 4.1E-36 8.8E-41 316.4 16.9 252 771-1042 77-391 (459)
82 cd07862 STKc_CDK6 Catalytic do 100.0 1.6E-35 3.4E-40 328.8 22.7 261 771-1042 1-286 (290)
83 cd05049 PTKc_Trk Catalytic dom 100.0 6.4E-36 1.4E-40 330.1 19.5 257 771-1046 5-280 (280)
84 PHA03212 serine/threonine kina 100.0 1.8E-35 4E-40 339.9 23.8 264 770-1047 91-382 (391)
85 PLN00034 mitogen-activated pro 100.0 1.6E-35 3.5E-40 337.9 23.0 246 772-1042 75-327 (353)
86 KOG0574 STE20-like serine/thre 100.0 7.3E-38 1.6E-42 313.7 3.1 246 773-1042 35-282 (502)
87 cd05614 STKc_MSK2_N N-terminal 100.0 1.3E-35 2.8E-40 336.0 21.9 251 772-1042 1-266 (332)
88 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7.7E-36 1.7E-40 324.7 19.2 252 771-1045 4-256 (256)
89 cd05585 STKc_YPK1_like Catalyt 100.0 6E-36 1.3E-40 335.3 18.8 239 779-1042 1-246 (312)
90 PTZ00426 cAMP-dependent protei 100.0 1.1E-35 2.3E-40 336.3 20.7 244 771-1042 30-283 (340)
91 KOG0618 Serine/threonine phosp 100.0 1.2E-38 2.5E-43 364.4 -3.9 480 93-640 5-487 (1081)
92 cd05059 PTKc_Tec_like Catalyti 100.0 9.1E-36 2E-40 324.2 18.9 251 771-1044 4-255 (256)
93 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.5E-35 3.3E-40 323.3 20.6 253 771-1046 6-259 (260)
94 PF07714 Pkinase_Tyr: Protein 100.0 1.3E-35 2.8E-40 323.3 19.9 249 775-1044 3-259 (259)
95 KOG0032 Ca2+/calmodulin-depend 100.0 2.2E-35 4.7E-40 330.2 22.2 255 770-1047 34-299 (382)
96 cd05595 STKc_PKB_beta Catalyti 100.0 2.3E-35 4.9E-40 332.0 22.4 241 777-1042 1-250 (323)
97 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.2E-35 6.9E-40 322.1 22.9 262 771-1049 2-267 (267)
98 cd05071 PTKc_Src Catalytic dom 100.0 1.7E-35 3.8E-40 323.1 20.8 255 770-1047 5-260 (262)
99 cd05108 PTKc_EGFR Catalytic do 100.0 1.3E-35 2.7E-40 333.6 19.9 257 771-1050 7-271 (316)
100 KOG4257 Focal adhesion tyrosin 100.0 2.7E-36 5.8E-41 329.2 13.8 258 769-1049 387-651 (974)
101 PTZ00283 serine/threonine prot 100.0 8.1E-36 1.8E-40 352.3 19.0 255 769-1042 30-296 (496)
102 cd08229 STKc_Nek7 Catalytic do 100.0 2.2E-35 4.8E-40 323.4 21.1 261 771-1048 2-266 (267)
103 PTZ00036 glycogen synthase kin 100.0 1.6E-35 3.4E-40 345.9 21.0 266 770-1048 65-358 (440)
104 cd05601 STKc_CRIK Catalytic do 100.0 1.1E-35 2.3E-40 336.4 19.0 252 771-1042 1-262 (330)
105 cd05593 STKc_PKB_gamma Catalyt 100.0 1.6E-35 3.4E-40 334.0 20.1 241 777-1042 1-250 (328)
106 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.4E-35 5.2E-40 326.0 21.2 267 773-1048 6-282 (283)
107 KOG4278 Protein tyrosine kinas 100.0 3.6E-36 7.7E-41 327.1 13.7 257 769-1047 265-523 (1157)
108 cd05599 STKc_NDR_like Catalyti 100.0 2E-35 4.4E-40 339.0 20.8 251 771-1042 1-295 (364)
109 cd05608 STKc_GRK1 Catalytic do 100.0 3.8E-35 8.3E-40 323.6 22.2 251 779-1046 1-262 (280)
110 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.3E-35 5E-40 321.8 20.2 254 770-1046 5-259 (260)
111 cd05054 PTKc_VEGFR Catalytic d 100.0 1.4E-35 3E-40 335.4 18.9 262 770-1049 6-335 (337)
112 cd05596 STKc_ROCK Catalytic do 100.0 1.9E-35 4.2E-40 338.4 20.4 253 769-1042 41-303 (370)
113 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.4E-35 5.1E-40 326.3 20.4 263 771-1048 4-284 (284)
114 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.1E-35 2.4E-40 339.5 18.1 251 771-1042 1-284 (350)
115 cd05628 STKc_NDR1 Catalytic do 100.0 4.3E-35 9.2E-40 335.5 23.0 252 771-1042 1-292 (363)
116 cd05062 PTKc_IGF-1R Catalytic 100.0 2.2E-35 4.8E-40 325.2 19.8 259 769-1046 4-277 (277)
117 KOG4717 Serine/threonine prote 100.0 1.2E-35 2.6E-40 317.2 17.0 252 771-1047 18-276 (864)
118 cd05605 STKc_GRK4_like Catalyt 100.0 4.6E-35 1E-39 323.8 22.1 251 772-1042 1-260 (285)
119 cd05626 STKc_LATS2 Catalytic d 100.0 4.4E-35 9.5E-40 337.6 22.6 251 772-1042 2-304 (381)
120 cd05084 PTKc_Fes Catalytic dom 100.0 3.1E-35 6.7E-40 319.2 20.1 248 777-1046 1-252 (252)
121 cd05621 STKc_ROCK2 Catalytic d 100.0 3.3E-35 7.2E-40 336.0 21.3 255 767-1042 39-303 (370)
122 cd05607 STKc_GRK7 Catalytic do 100.0 8.9E-35 1.9E-39 320.1 23.3 245 779-1042 1-249 (277)
123 cd05584 STKc_p70S6K Catalytic 100.0 6.3E-35 1.4E-39 328.6 22.5 241 777-1042 2-255 (323)
124 cd07853 STKc_NLK Catalytic dom 100.0 3.9E-35 8.5E-40 337.2 21.2 264 772-1046 1-293 (372)
125 cd05069 PTKc_Yes Catalytic dom 100.0 6.4E-35 1.4E-39 318.3 21.7 253 771-1046 6-259 (260)
126 cd05085 PTKc_Fer Catalytic dom 100.0 5.6E-35 1.2E-39 316.8 21.1 247 777-1045 1-249 (250)
127 cd05053 PTKc_FGFR Catalytic do 100.0 2.3E-35 5.1E-40 327.9 18.6 260 770-1048 11-292 (293)
128 cd05090 PTKc_Ror1 Catalytic do 100.0 3.9E-35 8.4E-40 324.4 20.2 257 771-1046 5-282 (283)
129 cd05618 STKc_aPKC_iota Catalyt 100.0 4.5E-35 9.7E-40 330.4 21.0 243 777-1037 1-250 (329)
130 cd05588 STKc_aPKC Catalytic do 100.0 4.2E-35 9.1E-40 330.8 20.7 248 777-1042 1-261 (329)
131 PRK13184 pknD serine/threonine 100.0 4.4E-35 9.5E-40 352.8 21.7 260 771-1047 2-290 (932)
132 cd05589 STKc_PKN Catalytic dom 100.0 4.5E-35 9.8E-40 330.1 20.5 244 773-1042 1-256 (324)
133 cd05043 PTK_Ryk Pseudokinase d 100.0 1E-34 2.2E-39 320.5 22.9 262 770-1050 5-279 (280)
134 cd05045 PTKc_RET Catalytic dom 100.0 5.4E-35 1.2E-39 324.4 20.5 259 772-1049 1-288 (290)
135 cd05590 STKc_nPKC_eta Catalyti 100.0 4.1E-35 8.9E-40 329.5 19.6 236 777-1037 1-241 (320)
136 cd05629 STKc_NDR_like_fungal C 100.0 5.5E-35 1.2E-39 336.6 21.1 251 771-1042 1-304 (377)
137 cd05592 STKc_nPKC_theta_delta 100.0 5.7E-35 1.2E-39 327.7 20.6 240 777-1041 1-246 (316)
138 cd06619 PKc_MKK5 Catalytic dom 100.0 2.1E-34 4.6E-39 317.7 24.8 250 771-1042 1-252 (279)
139 cd05111 PTK_HER3 Pseudokinase 100.0 1.9E-34 4E-39 318.0 24.3 257 771-1050 7-271 (279)
140 cd05587 STKc_cPKC Catalytic do 100.0 6E-35 1.3E-39 329.1 20.7 241 772-1037 1-246 (324)
141 cd05035 PTKc_Axl_like Catalyti 100.0 8.8E-35 1.9E-39 319.7 21.3 256 773-1047 1-272 (273)
142 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.8E-35 1.2E-39 327.2 20.2 267 771-1048 6-293 (309)
143 cd05594 STKc_PKB_alpha Catalyt 100.0 4.6E-35 1E-39 330.1 19.5 242 777-1042 1-251 (325)
144 cd05116 PTKc_Syk Catalytic dom 100.0 7.9E-35 1.7E-39 317.0 20.5 246 778-1047 2-255 (257)
145 cd06646 STKc_MAP4K5 Catalytic 100.0 8.4E-35 1.8E-39 318.8 20.8 253 771-1043 9-265 (267)
146 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.3E-35 9.4E-40 336.6 19.3 260 770-1047 36-399 (401)
147 cd05616 STKc_cPKC_beta Catalyt 100.0 7E-35 1.5E-39 328.4 20.5 241 772-1037 1-246 (323)
148 cd05109 PTKc_HER2 Catalytic do 100.0 9.4E-35 2E-39 320.6 21.1 259 770-1051 6-272 (279)
149 cd05034 PTKc_Src_like Catalyti 100.0 2.1E-34 4.6E-39 314.5 23.6 255 770-1046 5-260 (261)
150 cd05598 STKc_LATS Catalytic do 100.0 5.1E-35 1.1E-39 336.9 19.7 250 772-1042 2-300 (376)
151 PF00069 Pkinase: Protein kina 100.0 9.1E-35 2E-39 317.1 20.6 252 773-1042 1-256 (260)
152 cd05622 STKc_ROCK1 Catalytic d 100.0 9.9E-35 2.1E-39 332.5 21.8 259 763-1042 35-303 (371)
153 cd05039 PTKc_Csk_like Catalyti 100.0 1.1E-34 2.4E-39 315.7 21.0 251 770-1047 5-256 (256)
154 cd06625 STKc_MEKK3_like Cataly 100.0 3E-34 6.4E-39 313.7 24.5 250 771-1042 2-259 (263)
155 cd05591 STKc_nPKC_epsilon Cata 100.0 1E-34 2.2E-39 326.7 21.4 241 777-1042 1-253 (321)
156 cd05095 PTKc_DDR2 Catalytic do 100.0 2.1E-34 4.6E-39 320.6 23.6 264 771-1046 5-296 (296)
157 cd05098 PTKc_FGFR1 Catalytic d 100.0 6.9E-35 1.5E-39 326.3 19.9 260 771-1049 18-301 (307)
158 cd05097 PTKc_DDR_like Catalyti 100.0 1.3E-34 2.9E-39 322.0 22.1 264 771-1046 5-295 (295)
159 cd05092 PTKc_TrkA Catalytic do 100.0 6.7E-35 1.5E-39 321.8 19.5 257 771-1046 5-280 (280)
160 cd05115 PTKc_Zap-70 Catalytic 100.0 1.1E-34 2.5E-39 315.6 21.0 246 779-1047 3-255 (257)
161 KOG0607 MAP kinase-interacting 100.0 4.1E-35 8.8E-40 297.1 16.1 271 762-1050 74-370 (463)
162 cd05075 PTKc_Axl Catalytic dom 100.0 3.2E-34 6.8E-39 315.2 24.6 256 773-1047 1-271 (272)
163 cd05101 PTKc_FGFR2 Catalytic d 100.0 8.9E-35 1.9E-39 325.0 20.5 260 770-1048 14-297 (304)
164 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.1E-34 2.4E-39 318.0 20.9 255 771-1047 5-267 (268)
165 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.1E-34 2.3E-39 327.2 21.2 243 777-1037 1-248 (327)
166 cd05088 PTKc_Tie2 Catalytic do 100.0 5.7E-35 1.2E-39 326.1 18.7 257 771-1048 7-281 (303)
167 cd05066 PTKc_EphR_A Catalytic 100.0 1.1E-34 2.3E-39 317.9 20.6 255 771-1047 4-266 (267)
168 cd05055 PTKc_PDGFR Catalytic d 100.0 9.2E-35 2E-39 324.1 20.4 257 771-1047 35-301 (302)
169 cd05625 STKc_LATS1 Catalytic d 100.0 9.9E-35 2.1E-39 335.1 21.3 250 772-1042 2-304 (382)
170 cd08529 STKc_FA2-like Catalyti 100.0 1.4E-34 3E-39 314.9 21.2 249 772-1042 1-252 (256)
171 cd05089 PTKc_Tie1 Catalytic do 100.0 8.7E-35 1.9E-39 323.8 20.0 257 771-1048 2-276 (297)
172 cd05036 PTKc_ALK_LTK Catalytic 100.0 9.5E-35 2.1E-39 320.1 20.0 257 770-1045 5-276 (277)
173 cd05619 STKc_nPKC_theta Cataly 100.0 1.3E-34 2.9E-39 324.6 21.4 241 777-1042 1-247 (316)
174 cd06654 STKc_PAK1 Catalytic do 100.0 1.1E-34 2.4E-39 322.6 20.6 249 771-1042 20-269 (296)
175 cd05051 PTKc_DDR Catalytic dom 100.0 3.6E-34 7.9E-39 318.9 24.8 265 770-1046 4-296 (296)
176 cd05032 PTKc_InsR_like Catalyt 100.0 7.3E-35 1.6E-39 321.1 18.7 258 770-1046 5-277 (277)
177 cd05073 PTKc_Hck Catalytic dom 100.0 1.4E-34 3.1E-39 315.6 20.8 254 770-1046 5-259 (260)
178 KOG4279 Serine/threonine prote 100.0 1.9E-35 4.1E-40 325.4 13.6 245 777-1042 581-831 (1226)
179 cd05091 PTKc_Ror2 Catalytic do 100.0 6.1E-35 1.3E-39 322.8 17.8 256 772-1046 6-282 (283)
180 cd05620 STKc_nPKC_delta Cataly 100.0 2.2E-34 4.8E-39 323.0 22.3 240 777-1041 1-246 (316)
181 cd05582 STKc_RSK_N N-terminal 100.0 2.9E-35 6.3E-40 330.8 15.1 238 777-1039 2-245 (318)
182 cd05597 STKc_DMPK_like Catalyt 100.0 2.1E-34 4.5E-39 325.4 22.1 254 771-1042 1-265 (331)
183 cd05112 PTKc_Itk Catalytic dom 100.0 3.8E-34 8.3E-39 311.4 23.3 252 771-1045 4-256 (256)
184 cd05082 PTKc_Csk Catalytic dom 100.0 1.6E-34 3.5E-39 314.4 20.2 249 771-1047 6-256 (256)
185 cd05570 STKc_PKC Catalytic dom 100.0 1.3E-34 2.8E-39 325.3 19.9 241 777-1042 1-251 (318)
186 PTZ00266 NIMA-related protein 100.0 1.9E-34 4.1E-39 348.4 22.6 263 769-1049 11-303 (1021)
187 cd05056 PTKc_FAK Catalytic dom 100.0 2.4E-34 5.2E-39 315.7 21.5 258 771-1051 6-269 (270)
188 cd06615 PKc_MEK Catalytic doma 100.0 2.8E-34 6.1E-39 321.3 22.4 264 771-1046 1-292 (308)
189 cd08219 STKc_Nek3 Catalytic do 100.0 1.7E-34 3.7E-39 314.0 19.8 250 772-1043 1-252 (255)
190 KOG0618 Serine/threonine phosp 100.0 2.6E-37 5.7E-42 353.3 -2.5 486 87-639 22-510 (1081)
191 cd05061 PTKc_InsR Catalytic do 100.0 1.7E-34 3.8E-39 319.9 20.1 260 769-1047 4-278 (288)
192 cd05630 STKc_GRK6 Catalytic do 100.0 4.2E-34 9E-39 316.1 23.0 255 772-1046 1-266 (285)
193 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.4E-34 3E-39 320.1 19.0 262 771-1047 4-283 (284)
194 cd05575 STKc_SGK Catalytic dom 100.0 1E-34 2.3E-39 327.0 18.1 237 777-1038 1-242 (323)
195 cd05602 STKc_SGK1 Catalytic do 100.0 1.2E-34 2.6E-39 326.8 18.3 241 777-1042 1-246 (325)
196 cd05060 PTKc_Syk_like Catalyti 100.0 3.3E-34 7E-39 312.2 21.0 248 777-1048 1-256 (257)
197 cd05065 PTKc_EphR_B Catalytic 100.0 2.2E-34 4.7E-39 315.9 19.7 255 771-1047 4-268 (269)
198 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.5E-34 7.6E-39 312.6 21.2 239 777-1044 1-261 (262)
199 cd05050 PTKc_Musk Catalytic do 100.0 2E-34 4.3E-39 319.6 19.5 258 770-1046 4-288 (288)
200 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.6E-34 1.2E-38 323.6 23.6 262 771-1050 7-342 (343)
201 cd05615 STKc_cPKC_alpha Cataly 100.0 2.7E-34 5.8E-39 323.4 20.7 241 772-1037 1-246 (323)
202 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 8.5E-34 1.9E-38 311.1 24.2 254 777-1045 1-268 (269)
203 cd05040 PTKc_Ack_like Catalyti 100.0 7.1E-34 1.5E-38 309.6 23.3 248 777-1045 1-256 (257)
204 cd05047 PTKc_Tie Catalytic dom 100.0 3.2E-34 6.8E-39 314.7 20.6 251 777-1048 1-269 (270)
205 cd05632 STKc_GRK5 Catalytic do 100.0 6.6E-34 1.4E-38 314.6 23.2 250 773-1042 2-260 (285)
206 cd05041 PTKc_Fes_like Catalyti 100.0 3.8E-34 8.3E-39 310.5 20.8 248 777-1046 1-251 (251)
207 cd07863 STKc_CDK4 Catalytic do 100.0 5.2E-34 1.1E-38 316.3 22.2 260 772-1042 1-284 (288)
208 cd06638 STKc_myosinIIIA Cataly 100.0 4.9E-34 1.1E-38 316.1 21.9 262 763-1043 10-283 (286)
209 cd07876 STKc_JNK2 Catalytic do 100.0 5.9E-34 1.3E-38 325.9 23.2 258 770-1042 20-314 (359)
210 cd05604 STKc_SGK3 Catalytic do 100.0 1.1E-34 2.4E-39 327.1 16.8 239 777-1040 1-244 (325)
211 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.5E-34 7.7E-39 321.5 20.8 260 771-1049 12-295 (314)
212 cd07861 STKc_CDK1_euk Catalyti 100.0 4.4E-34 9.5E-39 316.3 21.2 262 772-1042 1-281 (285)
213 cd06637 STKc_TNIK Catalytic do 100.0 2.1E-34 4.6E-39 316.5 18.5 252 769-1042 4-268 (272)
214 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.6E-34 5.7E-39 320.7 19.5 267 771-1048 6-293 (301)
215 cd06643 STKc_SLK Catalytic dom 100.0 9.8E-34 2.1E-38 313.0 23.8 249 773-1042 7-261 (282)
216 cd06624 STKc_ASK Catalytic dom 100.0 4.9E-34 1.1E-38 312.9 21.3 254 768-1042 5-264 (268)
217 cd05046 PTK_CCK4 Pseudokinase 100.0 9.7E-34 2.1E-38 311.8 23.5 257 771-1045 5-274 (275)
218 cd06612 STKc_MST1_2 Catalytic 100.0 4.9E-34 1.1E-38 310.6 20.9 249 771-1042 3-252 (256)
219 PHA03207 serine/threonine kina 100.0 6.1E-34 1.3E-38 329.0 22.8 260 770-1042 91-374 (392)
220 cd08528 STKc_Nek10 Catalytic d 100.0 4E-34 8.6E-39 313.8 20.3 256 772-1046 1-269 (269)
221 cd00192 PTKc Catalytic domain 100.0 1.1E-33 2.5E-38 308.5 23.5 250 777-1045 1-262 (262)
222 cd05627 STKc_NDR2 Catalytic do 100.0 3.1E-34 6.8E-39 328.1 19.9 251 771-1042 1-292 (360)
223 cd05623 STKc_MRCK_alpha Cataly 100.0 4.8E-34 1E-38 322.7 21.2 254 771-1042 1-265 (332)
224 cd07868 STKc_CDK8 Catalytic do 100.0 1.1E-33 2.4E-38 318.3 23.9 261 776-1042 6-313 (317)
225 PHA03209 serine/threonine kina 100.0 8.4E-34 1.8E-38 323.7 23.2 192 769-975 64-256 (357)
226 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.3E-34 7.1E-39 317.1 19.3 263 771-1048 4-284 (284)
227 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.7E-34 1E-38 313.7 20.4 239 778-1045 2-274 (274)
228 cd05624 STKc_MRCK_beta Catalyt 100.0 4.7E-34 1E-38 322.5 20.9 254 771-1042 1-265 (331)
229 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 6.5E-34 1.4E-38 314.7 21.4 255 771-1043 5-266 (284)
230 cd06655 STKc_PAK2 Catalytic do 100.0 8.9E-34 1.9E-38 315.2 22.6 249 771-1042 19-268 (296)
231 cd08227 PK_STRAD_alpha Pseudok 100.0 1E-33 2.2E-38 319.6 23.3 268 775-1049 2-315 (327)
232 cd06656 STKc_PAK3 Catalytic do 100.0 5.1E-34 1.1E-38 317.5 20.5 254 771-1047 19-275 (297)
233 cd06645 STKc_MAP4K3 Catalytic 100.0 5E-34 1.1E-38 312.7 20.1 252 771-1042 9-264 (267)
234 cd06644 STKc_STK10_LOK Catalyt 100.0 2.2E-33 4.8E-38 311.8 25.5 251 771-1042 12-268 (292)
235 cd05603 STKc_SGK2 Catalytic do 100.0 2.7E-34 5.8E-39 323.5 18.2 237 777-1038 1-242 (321)
236 KOG0444 Cytoskeletal regulator 100.0 5.6E-37 1.2E-41 333.7 -3.5 363 87-482 8-373 (1255)
237 cd05057 PTKc_EGFR_like Catalyt 100.0 7.6E-34 1.6E-38 313.3 21.3 257 771-1050 7-271 (279)
238 cd05100 PTKc_FGFR3 Catalytic d 100.0 5.3E-34 1.2E-38 323.0 20.4 260 771-1049 12-295 (334)
239 PTZ00284 protein kinase; Provi 100.0 3E-34 6.5E-39 339.3 19.1 266 766-1046 124-443 (467)
240 cd06613 STKc_MAP4K3_like Catal 100.0 1.4E-33 3E-38 308.1 22.9 253 771-1042 3-259 (262)
241 cd05058 PTKc_Met_Ron Catalytic 100.0 1.6E-33 3.4E-38 307.8 23.1 251 777-1049 1-261 (262)
242 cd07874 STKc_JNK3 Catalytic do 100.0 8.6E-34 1.9E-38 324.1 21.8 259 769-1042 15-310 (355)
243 cd07832 STKc_CCRK Catalytic do 100.0 1.4E-33 3.1E-38 312.4 22.8 261 772-1042 1-281 (286)
244 KOG0667 Dual-specificity tyros 100.0 6.4E-34 1.4E-38 319.0 20.0 257 772-1042 187-501 (586)
245 KOG1025 Epidermal growth facto 100.0 7.1E-35 1.5E-39 327.4 12.3 254 774-1050 699-960 (1177)
246 cd06611 STKc_SLK_like Catalyti 100.0 9.4E-34 2E-38 312.8 21.1 255 771-1046 5-267 (280)
247 KOG0199 ACK and related non-re 100.0 8.7E-35 1.9E-39 321.4 12.6 249 772-1042 111-367 (1039)
248 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.6E-33 3.4E-38 312.0 22.9 257 772-1047 2-268 (286)
249 cd06631 STKc_YSK4 Catalytic do 100.0 2.3E-33 4.9E-38 307.1 23.9 250 772-1042 1-261 (265)
250 cd06639 STKc_myosinIIIB Cataly 100.0 1.4E-33 3E-38 313.4 22.3 263 761-1042 12-286 (291)
251 cd07875 STKc_JNK1 Catalytic do 100.0 1.3E-33 2.7E-38 323.8 22.6 258 770-1042 23-317 (364)
252 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.8E-33 3.9E-38 308.3 22.5 253 778-1045 2-267 (268)
253 cd06609 STKc_MST3_like Catalyt 100.0 2.1E-33 4.6E-38 308.9 23.1 247 772-1042 2-250 (274)
254 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.5E-33 3.2E-38 312.3 22.0 261 771-1042 1-282 (286)
255 KOG0584 Serine/threonine prote 100.0 1.3E-34 2.9E-39 320.7 13.4 245 774-1042 43-295 (632)
256 cd08221 STKc_Nek9 Catalytic do 100.0 1.6E-33 3.4E-38 306.6 21.6 250 772-1043 1-253 (256)
257 PHA03211 serine/threonine kina 100.0 2.2E-33 4.9E-38 325.9 23.9 259 770-1042 168-454 (461)
258 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.2E-33 6.9E-38 309.6 24.2 264 772-1048 2-273 (287)
259 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.1E-33 2.4E-38 308.3 20.1 238 777-1045 1-259 (259)
260 cd08217 STKc_Nek2 Catalytic do 100.0 1.3E-33 2.8E-38 308.7 20.6 254 772-1042 1-261 (265)
261 cd07833 STKc_CDKL Catalytic do 100.0 9.2E-34 2E-38 314.3 19.5 262 771-1042 1-284 (288)
262 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.3E-33 2.7E-38 321.3 21.1 263 768-1047 12-304 (343)
263 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.4E-33 2.9E-38 309.2 20.5 248 772-1042 1-263 (267)
264 cd05042 PTKc_Aatyk Catalytic d 100.0 3.5E-33 7.6E-38 306.3 23.7 253 778-1045 2-268 (269)
265 cd07839 STKc_CDK5 Catalytic do 100.0 1E-33 2.3E-38 313.2 19.7 261 772-1042 1-280 (284)
266 KOG0577 Serine/threonine prote 100.0 5E-35 1.1E-39 317.3 8.7 243 773-1042 28-277 (948)
267 cd08223 STKc_Nek4 Catalytic do 100.0 1.7E-33 3.7E-38 306.5 20.9 249 772-1042 1-253 (257)
268 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.3E-33 2.7E-38 312.2 20.1 260 761-1042 6-278 (282)
269 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 9.7E-34 2.1E-38 308.6 18.9 240 777-1045 1-258 (258)
270 KOG0604 MAP kinase-activated p 100.0 1.5E-34 3.2E-39 291.2 11.2 251 771-1042 61-321 (400)
271 cd06651 STKc_MEKK3 Catalytic d 100.0 2.3E-33 5E-38 307.1 21.8 249 771-1042 2-260 (266)
272 cd06630 STKc_MEKK1 Catalytic d 100.0 3.7E-33 8E-38 305.9 23.3 252 772-1042 1-263 (268)
273 cd06642 STKc_STK25-YSK1 Cataly 100.0 8.9E-34 1.9E-38 312.5 18.3 250 772-1046 5-258 (277)
274 cd05044 PTKc_c-ros Catalytic d 100.0 9.9E-34 2.2E-38 310.7 18.5 251 777-1046 1-269 (269)
275 KOG0690 Serine/threonine prote 100.0 2.3E-34 4.9E-39 291.9 12.2 241 770-1035 167-411 (516)
276 cd05110 PTKc_HER4 Catalytic do 100.0 8.9E-34 1.9E-38 316.5 18.4 257 771-1050 7-271 (303)
277 KOG0986 G protein-coupled rece 100.0 1.6E-34 3.4E-39 305.9 11.5 249 769-1037 183-435 (591)
278 cd06640 STKc_MST4 Catalytic do 100.0 3.2E-33 6.9E-38 308.0 22.5 246 772-1042 5-252 (277)
279 KOG0596 Dual specificity; seri 100.0 8.8E-34 1.9E-38 307.5 17.5 252 770-1042 360-626 (677)
280 KOG0444 Cytoskeletal regulator 100.0 4.1E-36 9E-41 327.0 -0.6 370 228-646 6-379 (1255)
281 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.6E-33 3.5E-38 312.0 20.0 261 771-1042 1-282 (286)
282 cd06632 STKc_MEKK1_plant Catal 100.0 4.9E-33 1.1E-37 303.0 23.5 247 772-1042 1-254 (258)
283 smart00219 TyrKc Tyrosine kina 100.0 4.2E-33 9.1E-38 303.5 22.9 251 773-1044 1-258 (258)
284 cd06623 PKc_MAPKK_plant_like C 100.0 7.2E-33 1.6E-37 302.8 24.7 255 772-1047 2-262 (264)
285 cd05083 PTKc_Chk Catalytic dom 100.0 1.4E-33 3E-38 306.6 18.5 247 771-1046 6-253 (254)
286 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.9E-33 1.1E-37 307.6 23.1 253 771-1042 1-260 (283)
287 cd06608 STKc_myosinIII_like Ca 100.0 1.5E-33 3.3E-38 310.2 18.8 256 768-1042 3-271 (275)
288 cd06658 STKc_PAK5 Catalytic do 100.0 2.7E-33 5.8E-38 310.7 20.7 247 773-1042 24-271 (292)
289 cd07867 STKc_CDC2L6 Catalytic 100.0 6.8E-33 1.5E-37 311.9 24.2 196 776-977 6-218 (317)
290 cd06652 STKc_MEKK2 Catalytic d 100.0 4.3E-33 9.3E-38 304.9 21.8 249 771-1042 2-260 (265)
291 cd08218 STKc_Nek1 Catalytic do 100.0 2.5E-33 5.4E-38 305.1 19.7 249 772-1042 1-252 (256)
292 cd06610 STKc_OSR1_SPAK Catalyt 100.0 9.6E-33 2.1E-37 302.4 24.3 257 771-1042 1-263 (267)
293 cd06605 PKc_MAPKK Catalytic do 100.0 3.4E-33 7.4E-38 305.6 20.2 252 772-1042 2-256 (265)
294 cd05574 STKc_phototropin_like 100.0 3E-33 6.5E-38 314.5 20.3 256 771-1046 1-294 (316)
295 cd05586 STKc_Sck1_like Catalyt 100.0 1.3E-33 2.8E-38 319.3 17.2 240 779-1042 1-252 (330)
296 cd06629 STKc_MAPKKK_Bck1_like 100.0 5.7E-33 1.2E-37 305.2 21.8 253 772-1042 2-268 (272)
297 cd05074 PTKc_Tyro3 Catalytic d 100.0 8.3E-33 1.8E-37 304.0 22.8 256 773-1047 1-272 (273)
298 cd07841 STKc_CDK7 Catalytic do 100.0 7.9E-33 1.7E-37 308.4 22.8 264 772-1046 1-287 (298)
299 cd06626 STKc_MEKK4 Catalytic d 100.0 1.5E-32 3.4E-37 300.2 24.7 251 772-1042 1-260 (264)
300 cd06647 STKc_PAK_I Catalytic d 100.0 4.9E-33 1.1E-37 308.9 21.0 254 771-1047 19-275 (293)
301 cd07844 STKc_PCTAIRE_like Cata 100.0 4.7E-33 1E-37 309.1 20.8 262 771-1042 5-287 (291)
302 KOG4250 TANK binding protein k 100.0 1.3E-33 2.8E-38 316.5 15.7 270 772-1047 14-310 (732)
303 cd06917 STKc_NAK1_like Catalyt 100.0 7.3E-33 1.6E-37 305.2 21.5 252 772-1047 2-261 (277)
304 cd07842 STKc_CDK8_like Catalyt 100.0 5.9E-33 1.3E-37 312.3 21.1 267 772-1042 1-312 (316)
305 cd07870 STKc_PFTAIRE2 Catalyti 100.0 9.8E-33 2.1E-37 306.5 22.6 264 769-1042 3-287 (291)
306 cd08220 STKc_Nek8 Catalytic do 100.0 1.4E-32 3.1E-37 299.0 23.5 248 772-1042 1-252 (256)
307 PHA03210 serine/threonine kina 100.0 2.9E-33 6.3E-38 331.7 19.4 267 770-1042 147-453 (501)
308 KOG0579 Ste20-like serine/thre 100.0 3.3E-34 7.2E-39 312.4 10.4 250 772-1042 33-288 (1187)
309 cd06659 STKc_PAK6 Catalytic do 100.0 7.8E-33 1.7E-37 307.8 21.4 247 773-1042 23-270 (297)
310 cd05609 STKc_MAST Catalytic do 100.0 1.2E-32 2.5E-37 308.0 22.8 253 772-1045 2-272 (305)
311 cd07860 STKc_CDK2_3 Catalytic 100.0 8.3E-33 1.8E-37 305.9 21.0 260 772-1042 1-280 (284)
312 cd06607 STKc_TAO Catalytic dom 100.0 1.5E-32 3.3E-37 307.3 22.5 245 771-1042 15-266 (307)
313 cd05580 STKc_PKA Catalytic dom 100.0 2E-32 4.4E-37 303.7 23.2 244 771-1042 1-253 (290)
314 cd05122 PKc_STE Catalytic doma 100.0 4.2E-32 9.1E-37 294.3 24.9 249 772-1042 1-250 (253)
315 cd06641 STKc_MST3 Catalytic do 100.0 1.6E-32 3.5E-37 302.4 21.7 246 772-1042 5-252 (277)
316 cd06648 STKc_PAK_II Catalytic 100.0 2.2E-32 4.7E-37 302.5 22.8 248 772-1042 20-268 (285)
317 cd07837 STKc_CdkB_plant Cataly 100.0 1.1E-32 2.3E-37 306.9 20.3 264 771-1042 1-290 (295)
318 cd07836 STKc_Pho85 Catalytic d 100.0 1.9E-32 4.1E-37 303.1 22.1 262 772-1042 1-280 (284)
319 cd05578 STKc_Yank1 Catalytic d 100.0 9.8E-33 2.1E-37 300.8 19.1 247 772-1041 1-253 (258)
320 cd07843 STKc_CDC2L1 Catalytic 100.0 2E-32 4.3E-37 304.4 21.9 261 771-1042 5-289 (293)
321 cd07845 STKc_CDK10 Catalytic d 100.0 1.1E-32 2.4E-37 308.8 19.6 262 770-1042 6-289 (309)
322 cd06614 STKc_PAK Catalytic dom 100.0 3.4E-32 7.3E-37 301.4 23.1 256 769-1046 17-275 (286)
323 cd08215 STKc_Nek Catalytic dom 100.0 1.8E-32 4E-37 298.3 20.4 251 772-1042 1-254 (258)
324 cd07831 STKc_MOK Catalytic dom 100.0 3E-32 6.5E-37 301.1 22.3 257 773-1042 1-278 (282)
325 cd07835 STKc_CDK1_like Catalyt 100.0 1.9E-32 4E-37 303.0 20.6 260 773-1042 1-279 (283)
326 cd07864 STKc_CDK12 Catalytic d 100.0 1.8E-32 3.8E-37 306.3 20.5 264 769-1042 5-298 (302)
327 cd08225 STKc_Nek5 Catalytic do 100.0 9.5E-33 2.1E-37 300.6 17.8 249 772-1042 1-253 (257)
328 cd07840 STKc_CDK9_like Catalyt 100.0 2.1E-32 4.6E-37 303.1 20.9 260 773-1042 1-283 (287)
329 KOG0612 Rho-associated, coiled 100.0 1.4E-33 3.1E-38 328.6 11.8 259 763-1042 67-337 (1317)
330 cd08530 STKc_CNK2-like Catalyt 100.0 1.4E-32 3E-37 299.0 18.8 249 772-1042 1-252 (256)
331 cd07849 STKc_ERK1_2_like Catal 100.0 9E-33 2E-37 313.2 17.9 266 770-1047 4-298 (336)
332 cd06616 PKc_MKK4 Catalytic dom 100.0 1.6E-32 3.4E-37 304.4 19.4 255 772-1042 5-266 (288)
333 KOG0983 Mitogen-activated prot 100.0 5.1E-33 1.1E-37 276.4 13.2 249 773-1042 94-348 (391)
334 KOG0586 Serine/threonine prote 100.0 8.2E-33 1.8E-37 306.5 16.3 248 769-1042 54-305 (596)
335 cd07850 STKc_JNK Catalytic dom 100.0 5.5E-32 1.2E-36 308.9 23.6 259 769-1042 14-310 (353)
336 KOG0666 Cyclin C-dependent kin 100.0 7E-33 1.5E-37 280.1 14.1 268 771-1042 24-336 (438)
337 KOG4645 MAPKKK (MAP kinase kin 100.0 2.9E-34 6.3E-39 338.6 4.6 251 770-1042 1234-1493(1509)
338 cd07855 STKc_ERK5 Catalytic do 100.0 1.5E-32 3.2E-37 311.1 18.4 269 770-1049 4-302 (334)
339 cd06635 STKc_TAO1 Catalytic do 100.0 5E-32 1.1E-36 304.4 22.5 245 773-1044 27-278 (317)
340 PHA03390 pk1 serine/threonine- 100.0 1E-31 2.2E-36 294.0 24.0 251 762-1042 5-261 (267)
341 PLN00009 cyclin-dependent kina 100.0 6.5E-32 1.4E-36 300.4 22.6 267 771-1047 2-290 (294)
342 cd05118 STKc_CMGC Catalytic do 100.0 4.2E-32 9.1E-37 300.1 20.7 259 773-1042 1-279 (283)
343 cd05633 STKc_GRK3 Catalytic do 100.0 5.8E-32 1.3E-36 298.0 21.7 241 778-1042 1-254 (279)
344 KOG1035 eIF-2alpha kinase GCN2 100.0 5.4E-33 1.2E-37 326.6 14.1 252 770-1042 478-870 (1351)
345 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2E-32 4.4E-37 310.3 18.3 265 770-1047 4-297 (337)
346 cd06606 STKc_MAPKKK Catalytic 100.0 1.6E-31 3.4E-36 291.1 24.5 250 772-1042 1-256 (260)
347 cd06657 STKc_PAK4 Catalytic do 100.0 6.4E-32 1.4E-36 299.5 21.5 248 776-1046 25-275 (292)
348 cd07834 STKc_MAPK Catalytic do 100.0 2.6E-32 5.7E-37 308.9 18.7 268 772-1050 1-298 (330)
349 cd05572 STKc_cGK_PKG Catalytic 100.0 1E-31 2.2E-36 293.5 22.6 247 779-1047 1-258 (262)
350 cd07865 STKc_CDK9 Catalytic do 100.0 4.1E-32 8.9E-37 304.5 19.7 266 770-1042 11-306 (310)
351 cd07852 STKc_MAPK15 Catalytic 100.0 3.5E-32 7.5E-37 308.7 19.2 268 769-1048 5-302 (337)
352 cd06653 STKc_MEKK3_like_1 Cata 100.0 7.9E-32 1.7E-36 294.7 21.1 249 771-1042 2-260 (264)
353 cd05577 STKc_GRK Catalytic dom 100.0 8.4E-32 1.8E-36 296.7 21.4 244 779-1042 1-253 (277)
354 cd06627 STKc_Cdc7_like Catalyt 100.0 2.2E-31 4.8E-36 289.2 24.0 247 772-1042 1-250 (254)
355 cd08226 PK_STRAD_beta Pseudoki 100.0 1.7E-31 3.8E-36 301.6 24.1 264 778-1048 5-315 (328)
356 PHA02882 putative serine/threo 100.0 1.7E-31 3.6E-36 296.7 22.8 256 770-1045 11-294 (294)
357 cd05579 STKc_MAST_like Catalyt 100.0 9.7E-32 2.1E-36 293.9 20.4 244 779-1044 1-255 (265)
358 cd05583 STKc_MSK_N N-terminal 100.0 1.3E-31 2.8E-36 297.1 21.5 255 772-1046 1-266 (288)
359 cd08216 PK_STRAD Pseudokinase 100.0 2.1E-31 4.6E-36 299.2 23.5 265 776-1048 7-302 (314)
360 cd05613 STKc_MSK1_N N-terminal 100.0 1.9E-31 4E-36 296.1 22.6 251 772-1042 1-267 (290)
361 cd07838 STKc_CDK4_6_like Catal 100.0 3.2E-31 7E-36 293.7 24.4 259 773-1042 1-283 (287)
362 cd07879 STKc_p38delta_MAPK13 C 100.0 8.9E-32 1.9E-36 305.6 19.2 263 770-1049 14-305 (342)
363 cd07830 STKc_MAK_like Catalyti 100.0 1.9E-31 4.2E-36 294.9 21.4 259 773-1042 1-279 (283)
364 cd06618 PKc_MKK7 Catalytic dom 100.0 2E-31 4.4E-36 296.6 21.5 251 771-1042 15-272 (296)
365 cd07866 STKc_BUR1 Catalytic do 100.0 1.5E-31 3.3E-36 300.0 20.2 263 770-1042 7-307 (311)
366 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.5E-31 3.2E-36 304.1 20.0 270 761-1046 7-305 (345)
367 cd05611 STKc_Rim15_like Cataly 100.0 4.2E-31 9E-36 288.3 22.7 241 777-1042 2-247 (260)
368 cd06634 STKc_TAO2 Catalytic do 100.0 1.8E-31 3.8E-36 298.7 20.2 244 772-1042 16-266 (308)
369 cd06633 STKc_TAO3 Catalytic do 100.0 8.2E-31 1.8E-35 293.9 25.6 243 773-1042 23-272 (313)
370 cd05606 STKc_beta_ARK Catalyti 100.0 3.4E-31 7.3E-36 291.9 21.7 241 778-1042 1-254 (278)
371 cd05581 STKc_PDK1 Catalytic do 100.0 2.3E-31 5E-36 293.7 20.2 248 771-1042 1-276 (280)
372 PTZ00024 cyclin-dependent prot 100.0 3.1E-31 6.6E-36 300.7 21.5 261 771-1042 8-312 (335)
373 cd08222 STKc_Nek11 Catalytic d 100.0 1.4E-31 3.1E-36 291.9 17.8 250 772-1042 1-256 (260)
374 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.6E-31 3.5E-36 301.3 18.3 265 765-1042 4-287 (328)
375 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.6E-31 5.7E-36 301.7 19.4 266 770-1047 4-306 (342)
376 KOG4236 Serine/threonine prote 100.0 1.8E-32 3.9E-37 293.7 9.2 244 776-1042 569-818 (888)
377 KOG0200 Fibroblast/platelet-de 100.0 1.7E-31 3.7E-36 320.9 18.7 259 771-1047 296-579 (609)
378 cd07829 STKc_CDK_like Catalyti 100.0 4.1E-31 8.8E-36 292.1 20.2 259 773-1042 1-278 (282)
379 KOG1024 Receptor-like protein 100.0 7.6E-32 1.6E-36 280.3 12.5 268 762-1048 275-556 (563)
380 cd07851 STKc_p38 Catalytic dom 100.0 3.2E-31 7E-36 301.1 18.8 263 769-1047 13-304 (343)
381 KOG0696 Serine/threonine prote 100.0 4.9E-32 1.1E-36 282.7 10.7 240 771-1035 349-593 (683)
382 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.1E-31 8.8E-36 300.2 18.4 263 769-1047 13-304 (343)
383 cd07857 STKc_MPK1 Catalytic do 100.0 1E-30 2.2E-35 295.9 21.6 265 772-1047 1-298 (332)
384 KOG0662 Cyclin-dependent kinas 100.0 4.3E-31 9.3E-36 246.5 14.7 260 772-1042 3-282 (292)
385 KOG0603 Ribosomal protein S6 k 100.0 1E-31 2.2E-36 299.5 12.5 239 770-1042 321-562 (612)
386 KOG1006 Mitogen-activated prot 100.0 2.4E-32 5.1E-37 270.9 6.6 252 776-1042 69-326 (361)
387 KOG0587 Traf2- and Nck-interac 100.0 8.3E-31 1.8E-35 299.3 16.8 255 767-1042 15-281 (953)
388 cd05610 STKc_MASTL Catalytic d 100.0 2.1E-30 4.5E-35 316.7 21.5 145 771-922 4-152 (669)
389 cd05123 STKc_AGC Catalytic dom 100.0 5.1E-30 1.1E-34 277.9 21.5 236 779-1039 1-240 (250)
390 KOG0671 LAMMER dual specificit 100.0 1.9E-31 4E-36 278.8 9.5 259 770-1042 88-405 (415)
391 KOG0614 cGMP-dependent protein 100.0 8.5E-32 1.8E-36 288.2 6.3 241 772-1036 421-665 (732)
392 KOG0669 Cyclin T-dependent kin 100.0 5.7E-32 1.2E-36 265.7 3.1 265 771-1042 17-314 (376)
393 cd05576 STKc_RPK118_like Catal 100.0 4.9E-30 1.1E-34 275.5 17.9 221 782-1039 4-225 (237)
394 KOG0984 Mitogen-activated prot 100.0 6.8E-30 1.5E-34 244.5 14.5 201 773-978 48-255 (282)
395 PLN03224 probable serine/threo 100.0 2.6E-29 5.6E-34 290.8 21.6 261 769-1042 143-499 (507)
396 PLN03225 Serine/threonine-prot 100.0 1.6E-29 3.4E-34 300.9 19.9 261 769-1042 130-449 (566)
397 KOG0695 Serine/threonine prote 100.0 6.9E-30 1.5E-34 260.0 14.1 248 770-1035 249-502 (593)
398 KOG1151 Tousled-like protein k 100.0 2.2E-30 4.8E-35 272.4 8.8 257 770-1042 462-740 (775)
399 KOG0608 Warts/lats-like serine 100.0 1.4E-29 3.1E-34 277.0 14.9 203 771-980 629-876 (1034)
400 smart00220 S_TKc Serine/Threon 100.0 1.6E-28 3.4E-33 264.4 21.5 238 783-1042 1-240 (244)
401 KOG0664 Nemo-like MAPK-related 100.0 1E-30 2.2E-35 259.4 3.1 260 775-1042 57-342 (449)
402 KOG1027 Serine/threonine prote 100.0 2.6E-29 5.6E-34 285.8 10.2 245 774-1042 512-766 (903)
403 KOG0668 Casein kinase II, alph 100.0 1.2E-28 2.5E-33 239.2 11.9 257 770-1042 37-321 (338)
404 KOG1290 Serine/threonine prote 99.9 1.9E-26 4.1E-31 247.4 19.3 283 754-1047 62-556 (590)
405 KOG1152 Signal transduction se 99.9 1.5E-27 3.3E-32 259.8 8.2 197 770-976 560-770 (772)
406 KOG0576 Mitogen-activated prot 99.9 8.5E-28 1.9E-32 266.2 6.3 252 770-1042 14-270 (829)
407 cd00180 PKc Catalytic domain o 99.9 8.3E-26 1.8E-30 237.2 21.2 210 779-1043 1-214 (215)
408 KOG0665 Jun-N-terminal kinase 99.9 2.9E-27 6.3E-32 241.7 9.3 259 771-1042 17-309 (369)
409 smart00221 STYKc Protein kinas 99.9 2.7E-25 5.8E-30 236.4 19.3 198 773-976 1-201 (225)
410 KOG0670 U4/U6-associated splic 99.9 3.1E-26 6.8E-31 246.3 10.7 270 759-1042 422-745 (752)
411 KOG4237 Extracellular matrix p 99.9 2.3E-27 5E-32 248.1 1.0 417 210-639 50-498 (498)
412 KOG4237 Extracellular matrix p 99.9 4.7E-27 1E-31 245.8 -1.4 288 74-362 51-359 (498)
413 KOG1345 Serine/threonine kinas 99.9 2.5E-25 5.3E-30 221.7 10.7 251 771-1043 24-284 (378)
414 KOG1167 Serine/threonine prote 99.9 2.3E-25 4.9E-30 237.0 10.1 203 764-978 29-281 (418)
415 PLN03210 Resistant to P. syrin 99.9 1.6E-23 3.6E-28 270.6 23.5 272 199-507 551-837 (1153)
416 PLN03210 Resistant to P. syrin 99.9 5.5E-23 1.2E-27 265.7 26.3 337 152-506 552-904 (1153)
417 PLN00181 protein SPA1-RELATED; 99.9 1.5E-24 3.2E-29 272.4 8.7 194 824-1042 29-264 (793)
418 PRK15387 E3 ubiquitin-protein 99.9 1.8E-23 4E-28 249.8 14.9 61 582-647 403-463 (788)
419 KOG0195 Integrin-linked kinase 99.9 1.5E-24 3.3E-29 215.6 4.5 250 774-1048 193-447 (448)
420 PRK15387 E3 ubiquitin-protein 99.9 4.5E-23 9.7E-28 246.5 16.9 268 209-521 204-471 (788)
421 smart00750 KIND kinase non-cat 99.9 4.9E-23 1.1E-27 210.1 13.5 168 852-1048 1-170 (176)
422 PRK15370 E3 ubiquitin-protein 99.9 2.7E-22 5.9E-27 241.8 17.0 319 34-415 56-406 (754)
423 PRK09188 serine/threonine prot 99.9 4.6E-22 9.9E-27 221.0 16.1 165 769-950 16-195 (365)
424 KOG1164 Casein kinase (serine/ 99.9 1.8E-21 3.8E-26 218.0 19.9 258 772-1047 19-297 (322)
425 KOG1165 Casein kinase (serine/ 99.9 1.3E-21 2.8E-26 200.8 16.7 258 771-1046 28-298 (449)
426 KOG1163 Casein kinase (serine/ 99.9 5.6E-22 1.2E-26 194.6 13.0 258 770-1045 14-282 (341)
427 KOG0590 Checkpoint kinase and 99.9 5.8E-22 1.3E-26 234.9 8.5 259 774-1048 321-592 (601)
428 PRK15370 E3 ubiquitin-protein 99.8 7E-21 1.5E-25 229.7 14.4 245 208-508 180-428 (754)
429 COG0515 SPS1 Serine/threonine 99.8 1.7E-19 3.7E-24 204.0 23.8 259 773-1042 2-274 (384)
430 PRK10359 lipopolysaccharide co 99.8 3E-20 6.5E-25 191.4 9.3 170 770-969 30-216 (232)
431 cd05147 RIO1_euk RIO kinase fa 99.8 2E-19 4.4E-24 184.1 12.2 140 776-925 2-168 (190)
432 PF14531 Kinase-like: Kinase-l 99.8 3.3E-19 7.2E-24 189.3 12.5 234 772-1034 13-288 (288)
433 KOG1240 Protein kinase contain 99.8 9.6E-20 2.1E-24 213.1 6.1 250 772-1048 24-296 (1431)
434 PRK12274 serine/threonine prot 99.8 2E-18 4.4E-23 173.6 14.5 184 774-976 5-208 (218)
435 cd05145 RIO1_like RIO kinase f 99.8 2.1E-18 4.6E-23 177.5 15.1 140 776-926 2-169 (190)
436 cd00116 LRR_RI Leucine-rich re 99.8 5.6E-20 1.2E-24 207.0 -1.2 276 187-483 4-319 (319)
437 cd00116 LRR_RI Leucine-rich re 99.8 9.4E-20 2E-24 205.2 0.4 273 234-506 3-318 (319)
438 KOG0603 Ribosomal protein S6 k 99.7 2.9E-19 6.3E-24 200.4 3.0 225 778-1037 1-232 (612)
439 KOG1166 Mitotic checkpoint ser 99.7 1E-17 2.2E-22 201.6 13.2 251 765-1047 692-953 (974)
440 KOG1023 Natriuretic peptide re 99.7 1.2E-17 2.5E-22 188.5 12.5 216 822-1049 2-226 (484)
441 KOG0617 Ras suppressor protein 99.7 1.4E-19 3E-24 168.7 -3.5 162 421-649 31-193 (264)
442 KOG0617 Ras suppressor protein 99.7 7.7E-20 1.7E-24 170.4 -5.7 179 250-433 30-209 (264)
443 PRK10345 hypothetical protein; 99.7 1E-16 2.2E-21 165.3 14.3 137 773-921 4-156 (210)
444 smart00090 RIO RIO-like kinase 99.7 1.9E-16 4.1E-21 167.8 14.1 148 766-925 23-199 (237)
445 PRK14879 serine/threonine prot 99.7 6.5E-16 1.4E-20 162.6 13.8 134 777-923 2-143 (211)
446 cd05144 RIO2_C RIO kinase fami 99.7 7.1E-16 1.5E-20 160.2 13.8 145 765-926 9-177 (198)
447 KOG0606 Microtubule-associated 99.7 6.9E-17 1.5E-21 189.6 6.1 208 771-1036 83-305 (1205)
448 KOG4158 BRPK/PTEN-induced prot 99.6 6E-16 1.3E-20 162.8 11.5 195 825-1043 274-510 (598)
449 KOG1033 eIF-2alpha kinase PEK/ 99.6 6.4E-17 1.4E-21 178.3 3.5 174 841-1040 330-509 (516)
450 TIGR03724 arch_bud32 Kae1-asso 99.6 8.7E-16 1.9E-20 160.0 11.8 131 778-924 1-139 (199)
451 PRK09605 bifunctional UGMP fam 99.6 1.5E-15 3.2E-20 181.9 13.8 139 770-924 332-477 (535)
452 PLN03150 hypothetical protein; 99.6 9.8E-16 2.1E-20 185.1 9.5 116 559-674 420-538 (623)
453 cd05120 APH_ChoK_like Aminogly 99.6 3.2E-14 7E-19 140.8 13.3 134 776-923 3-138 (155)
454 PLN03150 hypothetical protein; 99.6 2.1E-14 4.5E-19 173.6 13.7 134 36-172 367-504 (623)
455 cd05119 RIO RIO kinase family, 99.5 3.7E-14 8E-19 146.1 11.9 137 776-925 2-165 (187)
456 KOG0590 Checkpoint kinase and 99.5 2.4E-15 5.1E-20 178.8 -0.4 254 771-1042 20-285 (601)
457 PRK01723 3-deoxy-D-manno-octul 99.5 2E-13 4.4E-18 145.0 13.9 136 776-924 36-192 (239)
458 KOG0532 Leucine-rich repeat (L 99.4 5.6E-15 1.2E-19 162.6 -2.9 160 439-644 90-249 (722)
459 TIGR01982 UbiB 2-polyprenylphe 99.4 3.2E-12 6.9E-17 147.8 13.1 142 776-926 122-309 (437)
460 KOG0532 Leucine-rich repeat (L 99.3 5.9E-14 1.3E-18 154.6 -4.1 192 233-433 79-270 (722)
461 COG4886 Leucine-rich repeat (L 99.3 2E-12 4.3E-17 149.9 8.4 193 211-437 98-291 (394)
462 KOG1266 Protein kinase [Signal 99.3 2.2E-12 4.8E-17 133.4 6.8 204 818-1042 118-330 (458)
463 COG4886 Leucine-rich repeat (L 99.3 2.2E-12 4.9E-17 149.5 7.4 200 184-392 96-296 (394)
464 KOG0601 Cyclin-dependent kinas 99.2 5.5E-12 1.2E-16 142.8 5.9 247 772-1042 115-378 (524)
465 cd05151 ChoK Choline Kinase (C 99.2 3.8E-11 8.1E-16 121.5 10.3 131 776-923 3-136 (170)
466 PRK04750 ubiB putative ubiquin 99.2 2E-11 4.3E-16 142.3 9.1 145 771-926 120-316 (537)
467 KOG1243 Protein kinase [Genera 99.2 7E-10 1.5E-14 126.6 18.6 168 791-972 33-200 (690)
468 KOG1909 Ran GTPase-activating 99.2 3.5E-12 7.7E-17 133.6 -1.1 138 371-508 155-311 (382)
469 cd05146 RIO3_euk RIO kinase fa 99.1 6.2E-10 1.4E-14 112.7 14.7 138 776-926 2-176 (197)
470 KOG1909 Ran GTPase-activating 99.1 3.1E-12 6.7E-17 134.0 -2.6 85 86-170 30-132 (382)
471 KOG1259 Nischarin, modulator o 99.1 1.7E-11 3.7E-16 124.9 1.3 128 350-485 285-413 (490)
472 KOG3207 Beta-tubulin folding c 99.1 1.6E-11 3.5E-16 131.9 0.7 207 227-435 119-338 (505)
473 KOG3207 Beta-tubulin folding c 99.1 2.6E-11 5.7E-16 130.4 1.6 208 133-340 120-341 (505)
474 COG3642 Mn2+-dependent serine/ 99.1 1.1E-09 2.4E-14 106.2 12.0 131 777-923 2-140 (204)
475 KOG0601 Cyclin-dependent kinas 99.1 1.2E-10 2.7E-15 131.9 5.8 245 769-1044 263-515 (524)
476 KOG1259 Nischarin, modulator o 99.0 4.2E-11 9.1E-16 122.1 0.9 128 206-338 284-412 (490)
477 KOG0531 Protein phosphatase 1, 99.0 3.3E-11 7.1E-16 139.9 -0.2 127 276-410 161-290 (414)
478 cd05154 ACAD10_11_like Acyl-Co 99.0 1.7E-09 3.6E-14 114.7 13.0 142 777-923 4-206 (223)
479 PF14580 LRR_9: Leucine-rich r 99.0 1.3E-10 2.8E-15 115.2 4.0 83 108-194 17-101 (175)
480 KOG0531 Protein phosphatase 1, 99.0 6.9E-11 1.5E-15 137.2 0.0 198 204-412 70-270 (414)
481 KOG3087 Serine/threonine prote 99.0 4.8E-09 1E-13 101.0 12.4 143 775-923 11-165 (229)
482 PF14580 LRR_9: Leucine-rich r 99.0 4.1E-10 9E-15 111.7 5.5 124 86-213 19-147 (175)
483 KOG0606 Microtubule-associated 99.0 2.4E-10 5.3E-15 135.5 2.5 249 769-1038 802-1084(1205)
484 KOG3741 Poly(A) ribonuclease s 98.9 3.5E-08 7.6E-13 109.1 16.6 171 783-974 288-475 (655)
485 COG4248 Uncharacterized protei 98.9 7.5E-08 1.6E-12 103.7 17.2 262 775-1048 15-301 (637)
486 KOG4658 Apoptotic ATPase [Sign 98.8 3.4E-09 7.4E-14 131.0 6.2 178 326-509 546-731 (889)
487 KOG4658 Apoptotic ATPase [Sign 98.8 5.4E-09 1.2E-13 129.3 5.7 250 254-510 546-809 (889)
488 PRK15123 lipopolysaccharide co 98.8 1.1E-07 2.4E-12 102.2 14.7 141 777-923 28-194 (268)
489 PF01163 RIO1: RIO1 family; I 98.8 6.7E-08 1.5E-12 97.7 12.0 126 786-925 1-157 (188)
490 PF13855 LRR_8: Leucine rich r 98.7 5.2E-09 1.1E-13 85.3 3.0 61 581-641 1-61 (61)
491 PF13855 LRR_8: Leucine rich r 98.7 9.2E-09 2E-13 83.9 3.5 61 110-170 1-61 (61)
492 COG0478 RIO-like serine/threon 98.7 1.5E-07 3.2E-12 97.2 12.3 149 761-925 81-253 (304)
493 PF08263 LRRNT_2: Leucine rich 98.7 1.9E-08 4.1E-13 75.0 3.8 38 40-77 2-43 (43)
494 KOG1859 Leucine-rich repeat pr 98.5 5.6E-09 1.2E-13 118.7 -3.9 127 182-314 165-292 (1096)
495 KOG2982 Uncharacterized conser 98.5 2.8E-08 6.1E-13 102.0 0.8 116 102-217 37-157 (418)
496 KOG2137 Protein kinase [Signal 98.5 3.2E-08 6.9E-13 113.8 0.9 150 878-1042 106-264 (700)
497 PRK09902 hypothetical protein; 98.5 2.2E-06 4.8E-11 87.0 13.0 138 779-923 26-179 (216)
498 KOG2982 Uncharacterized conser 98.4 4.4E-08 9.5E-13 100.6 0.7 181 396-621 70-265 (418)
499 KOG1859 Leucine-rich repeat pr 98.4 7.8E-09 1.7E-13 117.5 -6.6 179 224-411 104-293 (1096)
500 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 3.4E-06 7.4E-11 88.9 13.6 132 777-922 7-181 (226)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.8e-116 Score=1131.07 Aligned_cols=942 Identities=30% Similarity=0.511 Sum_probs=785.4
Q ss_pred chhcccchhHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcCCC-CCCCCCcCCCCCCceeeeeeeCCCCCCC
Q 001561 5 MVVLGFVPMTCLKWLFLAFFVCSCLGLQTPFQSCDPSDLLALKEFAGNLTN-GSIITSWSNESMCCQWDGVVCGHGSTGS 83 (1052)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aLl~~k~~~~~-~~~l~sw~~~~~~c~w~gv~C~~~~~~~ 83 (1052)
|+.-|-.-++|..+.+++++++.+. -.++|+.||++||+++.+ .+.+.+|+..++||.|.||+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~----- 67 (968)
T PLN00113 1 MAKKGPQHCPYLIFMLFFLFLNFSM--------LHAEELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCNN----- 67 (968)
T ss_pred CCCCCCCCCChHHHHHHHHHHHccC--------CCHHHHHHHHHHHHhCCCCcccCCCCCCCCCCCcCcceecCC-----
Confidence 5666766777744333433333321 156899999999999964 45789999888999999999963
Q ss_pred CCCcEEEEEecCCCCcccCCccccCCcCCCeEecCCCCCCCCCccccc-CCCCccEEeccCCcccCcccccccccCCccE
Q 001561 84 NAGRVTMLILPRKGLKGIIPRSLGHLNQLKLLDLSCNHLEGVVPVELS-NLKQLEVLDLSHNMLSGPVSGMLAGLNLIQS 162 (1052)
Q Consensus 84 ~~~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~Ls~n~i~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 162 (1052)
.++|+.|+|++++++|.+++++..+++|+.|+|++|++++.+|..+. .+++|++|+|++|.+++.+|. +.+++|++
T Consensus 68 -~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~ 144 (968)
T PLN00113 68 -SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLET 144 (968)
T ss_pred -CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCE
Confidence 46899999999999999999999999999999999999998887754 999999999999999987774 56899999
Q ss_pred EEccCcccCCc-ccccccCCcccEEEecCCccCCccchhhhhcccccceeeccCccccc-ccccCCCCCCCCEEEccccc
Q 001561 163 LNVSSNSFNGS-LFELGEFSNLAVFNISNNSFTGKLNSRIWSASKEIQILDLSMNHFMG-SLQGLDHSPSLKQLHVDNNL 240 (1052)
Q Consensus 163 L~Ls~N~l~~~-~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~-~~~~l~~~~~L~~L~L~~N~ 240 (1052)
|+|++|.+++. +..++.+++|++|++++|.+.+.+|.. +..+++|++|+|++|++.+ .|..+..+++|++|+|++|.
T Consensus 145 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 223 (968)
T PLN00113 145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNS-LTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNN 223 (968)
T ss_pred EECcCCcccccCChHHhcCCCCCEEECccCcccccCChh-hhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCc
Confidence 99999999864 456999999999999999999888775 5678999999999999975 46778999999999999999
Q ss_pred CCCCCCccccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEccCCcCCCCCcccccCccccccccccCCcccCCCCcc
Q 001561 241 LGGDLPDSLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFGNQFSGKLPNVLGNLTQLEFFVAHSNSFSGPLPLS 320 (1052)
Q Consensus 241 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 320 (1052)
+++.+|..++++++|++|+|++|++++.+|..+.++++|++|+|++|++++.+|..+.++++|+.|++++|.+.+.+|..
T Consensus 224 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~ 303 (968)
T PLN00113 224 LSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPEL 303 (968)
T ss_pred cCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEEecCccccCcCCcccccCCccceeecccccccCCCCccccCCCccceeecccccccccCchhhccCCcCc
Q 001561 321 LSLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPLPNSLSDCHDLKILSLAKNELSGQVPESFGKLTSLL 400 (1052)
Q Consensus 321 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 400 (1052)
+..+++|+.|++++|.+++..|..+..+++|+.|+|++|.+++.+|..++.+++|+.|++++|++++.+|..+..+++|+
T Consensus 304 ~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~ 383 (968)
T PLN00113 304 VIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLF 383 (968)
T ss_pred HcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCcCCCCcccchhhccCcccceEeccccccCccCCccccCCCcccEEEccCCccccCcchhhhcCCCCcEEeCcC
Q 001561 401 FLSLSNNSFNHLSGTLSVLQQCKNLTTLILTKNFVGEEIPENVGGFESLMVLALGNCGLKGHIPVWLLRCKKLQVLDLSW 480 (1052)
Q Consensus 401 ~L~L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 480 (1052)
.|++++|++.... ...+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++++.+|..+..+++|+.|+|++
T Consensus 384 ~L~l~~n~l~~~~--p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 461 (968)
T PLN00113 384 KLILFSNSLEGEI--PKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLAR 461 (968)
T ss_pred EEECcCCEecccC--CHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcC
Confidence 9999999987532 24577899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCChhhccCCCCCeEeccCCcccccCCcchhhhhhhcccCCCCCCCCCCCCccceeeccccCCCcCCCCCCCCCC
Q 001561 481 NHFDGNIPPWIGQMENLFYLDFSNNTLTGEIPKSLTELKSLISSNCTSSNPTASAGIPLYVKHNRSTNGLPYNQASSFPP 560 (1052)
Q Consensus 481 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 560 (1052)
|++.+.+|..+ .+++|+.||+++|++++.+|..+.++++| .
T Consensus 462 n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L--------------------------------------~ 502 (968)
T PLN00113 462 NKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSEL--------------------------------------M 502 (968)
T ss_pred ceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhcc--------------------------------------C
Confidence 99999998866 46899999999999999999999888777 4
Q ss_pred eeeeecCcccccCCcccccccccceecccCceeeecCCCCcccccCcCeeeCCCCcCCCCCCccccCccccCeeeecccc
Q 001561 561 SVFLSNNRINGTIPPEIGQLKHLHVLDLSRNNITGTIPSSISEIRNLEVLDLSSNDLHGSIPGSFEKLTFLSKFSVANNH 640 (1052)
Q Consensus 561 ~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~l~l~~N~ 640 (1052)
.|+|++|++.+.+|..++++++|++|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..+++|+.|++++|+
T Consensus 503 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~ 582 (968)
T PLN00113 503 QLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNH 582 (968)
T ss_pred EEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCccCCCCCCcccCCCCCcCCC----CCCCCCcCCCCCCcCCCCCCCCCCCCcEEEEeeehhHHHHHHHHhhh
Q 001561 641 LQGTIPTGGQFYSFPNSSFEGNPGLCGEI----DSPCDSMHAKLKPVIPSGSNSKFGPGSIIAITFSIGVGIALLLAVTL 716 (1052)
Q Consensus 641 l~g~~p~~~~~~~~~~~~~~gn~~lcg~~----~~~~~~~~~~~~p~~~~~~~~~~~~~~ii~~~~~~~v~i~~l~~~~~ 716 (1052)
++|.+|..++|.++...+|.||+++||+. .++|... . +... ..+.+++++++++++++++++
T Consensus 583 l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~-----------~--~~~~-~~~~~~~~~~~~~~~~~~~~~ 648 (968)
T PLN00113 583 LHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV-----------R--KTPS-WWFYITCTLGAFLVLALVAFG 648 (968)
T ss_pred ceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccc-----------c--ccce-eeeehhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999962 1234210 0 1111 111122222222222222222
Q ss_pred hhhcccCCCCCCCCCccccCCcchhhHHhhccceeeecCCCCccccHHHHHHhhcCCcccCeEcccCceEEEEEEE-CCC
Q 001561 717 LKMSRRDSGCPIDDLDEDMGRPQRLSEALASSKLVLFQNSDCKDLTVSDLLKSTNNFNQANIIGCGGFGLVYKATL-TNG 795 (1052)
Q Consensus 717 ~~~~rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g 795 (1052)
++++||++...........+. .+...+.......++++++. +.|+..++||+|+||.||+|+. .++
T Consensus 649 ~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~ 715 (968)
T PLN00113 649 FVFIRGRNNLELKRVENEDGT----------WELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKSIKNG 715 (968)
T ss_pred HHHHHhhhccccccccccccc----------ccccccccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCC
Confidence 222333222111111000000 00111111112234455544 4577788999999999999987 478
Q ss_pred cEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHH
Q 001561 796 TKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLK 875 (1052)
Q Consensus 796 ~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~ 875 (1052)
..||||++...... ..+|++.+++++|||||+++++|.+++..++||||+++|+|.++++. ++|.++.+
T Consensus 716 ~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-------l~~~~~~~ 784 (968)
T PLN00113 716 MQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-------LSWERRRK 784 (968)
T ss_pred cEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc-------CCHHHHHH
Confidence 99999998644322 23468899999999999999999999999999999999999999863 78999999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeeeecccccccccCccccCCcCCCcc
Q 001561 876 IAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCR 955 (1052)
Q Consensus 876 i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 955 (1052)
++.|+++|++|||..+.++|+||||||+||+++.++.+++. ||.+...... ....||+.|+|||++.+..++.+
T Consensus 785 i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~ 858 (968)
T PLN00113 785 IAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-----TKCFISSAYVAPETRETKDITEK 858 (968)
T ss_pred HHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC-----CCccccccccCcccccCCCCCcc
Confidence 99999999999997767899999999999999999988875 6655433211 22368899999999999999999
Q ss_pred cchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc--hhhHHHHHHHHHHHHHcccCCCCC
Q 001561 956 GDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH--KDREKQLLEMLEIACKCIDQDPRR 1033 (1052)
Q Consensus 956 ~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~ 1033 (1052)
+|||||||++|||+||+.||+...+ ......+|..............++.... .....+..++.+++.+|++.||++
T Consensus 859 sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~ 937 (968)
T PLN00113 859 SDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTA 937 (968)
T ss_pred cchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchh
Confidence 9999999999999999999964322 2345566665444333333444444422 223455668899999999999999
Q ss_pred CCCHHHHHHHHhhcCc
Q 001561 1034 RPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 1034 RPs~~evl~~L~~i~~ 1049 (1052)
||+|+||+++|+++.+
T Consensus 938 RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 938 RPCANDVLKTLESASR 953 (968)
T ss_pred CcCHHHHHHHHHHhhc
Confidence 9999999999998865
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.3e-59 Score=600.81 Aligned_cols=514 Identities=33% Similarity=0.516 Sum_probs=472.6
Q ss_pred cCCCeEecCCCCCCCCCcccccCCCCccEEeccCCcccCccccc-ccccCCccEEEccCcccCCcccccccCCcccEEEe
Q 001561 110 NQLKLLDLSCNHLEGVVPVELSNLKQLEVLDLSHNMLSGPVSGM-LAGLNLIQSLNVSSNSFNGSLFELGEFSNLAVFNI 188 (1052)
Q Consensus 110 ~~L~~L~Ls~n~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~L 188 (1052)
.+++.|||++|++++.+|..|..+++|++|+|++|.+++.+|.. +..+.+|++|+|++|.+++... .+.+++|++|+|
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p-~~~l~~L~~L~L 147 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIP-RGSIPNLETLDL 147 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccC-ccccCCCCEEEC
Confidence 47999999999999999999999999999999999999876655 4599999999999999987543 367899999999
Q ss_pred cCCccCCccchhhhhcccccceeeccCccccc-ccccCCCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCCc
Q 001561 189 SNNSFTGKLNSRIWSASKEIQILDLSMNHFMG-SLQGLDHSPSLKQLHVDNNLLGGDLPDSLYSMSSLQHVSLSVNNFSG 267 (1052)
Q Consensus 189 s~n~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~-~~~~l~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 267 (1052)
++|.+++.+|.. +..+++|++|+|++|.+.+ .|..+.++++|++|+|++|.+.+.+|..++++++|++|+|++|++++
T Consensus 148 s~n~~~~~~p~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 226 (968)
T PLN00113 148 SNNMLSGEIPND-IGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSG 226 (968)
T ss_pred cCCcccccCChH-HhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCC
Confidence 999999888765 5678999999999999874 56678999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCcEEEccCCcCCCCCcccccCccccccccccCCcccCCCCcccccCCCCcEEEecCccccCcCCccccc
Q 001561 268 QLSEKISNLTSLRHLIIFGNQFSGKLPNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSG 347 (1052)
Q Consensus 268 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 347 (1052)
.+|..++++++|++|+|++|++++.+|..++++++|+.|++++|++.+.+|..+.++++|++|++++|.+.+.+|..+.+
T Consensus 227 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~ 306 (968)
T PLN00113 227 EIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQ 306 (968)
T ss_pred cCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccceeecccccccCCCCccccCCCccceeecccccccccCchhhccCCcCcEEeccCCcCCCCcccchhhccCcccce
Q 001561 348 LSSLCTLDLATNHFSGPLPNSLSDCHDLKILSLAKNELSGQVPESFGKLTSLLFLSLSNNSFNHLSGTLSVLQQCKNLTT 427 (1052)
Q Consensus 348 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~l~~L~~ 427 (1052)
+++|+.|++++|.+++.+|..+..+++|+.|++++|.+++.+|..++.+++|+.|++++|++++.. ...+..+++|+.
T Consensus 307 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~--p~~~~~~~~L~~ 384 (968)
T PLN00113 307 LQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEI--PEGLCSSGNLFK 384 (968)
T ss_pred CCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeC--ChhHhCcCCCCE
Confidence 999999999999999999999999999999999999999999999999999999999999987532 134667889999
Q ss_pred EeccccccCccCCccccCCCcccEEEccCCccccCcchhhhcCCCCcEEeCcCccCCCCCChhhccCCCCCeEeccCCcc
Q 001561 428 LILTKNFVGEEIPENVGGFESLMVLALGNCGLKGHIPVWLLRCKKLQVLDLSWNHFDGNIPPWIGQMENLFYLDFSNNTL 507 (1052)
Q Consensus 428 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 507 (1052)
|++++|.+.+.+|..+..+++|+.|++++|++++.+|..+..+++|+.|++++|.+++.+|..+..+++|++|+|++|++
T Consensus 385 L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~ 464 (968)
T PLN00113 385 LILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKF 464 (968)
T ss_pred EECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcchhhhhhhcccCCCCCCCCCCCCccceeeccccCCCcCCCCCCCCCCeeeeecCcccccCCcccccccccceec
Q 001561 508 TGEIPKSLTELKSLISSNCTSSNPTASAGIPLYVKHNRSTNGLPYNQASSFPPSVFLSNNRINGTIPPEIGQLKHLHVLD 587 (1052)
Q Consensus 508 ~~~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~Ls~N~l~g~ip~~~~~l~~L~~L~ 587 (1052)
.+.+|..+. ..+| +.|++++|++++.+|..++++++|+.|+
T Consensus 465 ~~~~p~~~~-~~~L--------------------------------------~~L~ls~n~l~~~~~~~~~~l~~L~~L~ 505 (968)
T PLN00113 465 FGGLPDSFG-SKRL--------------------------------------ENLDLSRNQFSGAVPRKLGSLSELMQLK 505 (968)
T ss_pred eeecCcccc-cccc--------------------------------------eEEECcCCccCCccChhhhhhhccCEEE
Confidence 998887542 1222 5789999999999999999999999999
Q ss_pred ccCceeeecCCCCcccccCcCeeeCCCCcCCCCCCccccCccccCeeeecccccccCCCCCC-ccCCCCCCcccCCCCCc
Q 001561 588 LSRNNITGTIPSSISEIRNLEVLDLSSNDLHGSIPGSFEKLTFLSKFSVANNHLQGTIPTGG-QFYSFPNSSFEGNPGLC 666 (1052)
Q Consensus 588 Ls~N~l~g~ip~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~-~~~~~~~~~~~gn~~lc 666 (1052)
|++|+++|.+|..++++++|++|+|++|+++|.+|..+..+++|+.|+|++|+++|.+|..- .+..+....+.+|+..+
T Consensus 506 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 506 LSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred CcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 99999999999999999999999999999999999999999999999999999999999752 34455556677887544
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-50 Score=452.54 Aligned_cols=291 Identities=51% Similarity=0.831 Sum_probs=255.1
Q ss_pred CCccccHHHHHHhhcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceE
Q 001561 757 DCKDLTVSDLLKSTNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYC 836 (1052)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 836 (1052)
....|+++++..++++|...++||+|+||.||+|...+|..||||++........++|..|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45678999999999999999999999999999999999999999988765432156699999999999999999999999
Q ss_pred eeCC-eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEE
Q 001561 837 RHGN-DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHL 915 (1052)
Q Consensus 837 ~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl 915 (1052)
.+.+ +.++|||||++|+|+++++..... +++|..|++||.++|+||+|||+.+.++|+||||||+|||+|+++++||
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence 9998 599999999999999999975432 8899999999999999999999998889999999999999999999999
Q ss_pred eecccccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhh
Q 001561 916 ADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKS 995 (1052)
Q Consensus 916 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 995 (1052)
+|||+|+..............||.+|+|||+...+..+.|+|||||||++.|++||+.|.+.........++.|......
T Consensus 219 sDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 219 SDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE 298 (361)
T ss_pred cCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence 99999976543122211111899999999999999999999999999999999999999876554455568999988888
Q ss_pred ccccccccccccc-chhhH-HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 996 EKREVEIIDASIW-HKDRE-KQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 996 ~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
.....+++|+.+. ..+.. .+..++..++.+|++.+|++||+|.||+++|+.+..
T Consensus 299 ~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 299 EGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred CcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 8889999999987 55554 678889999999999999999999999999977653
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-44 Score=378.93 Aligned_cols=249 Identities=28% Similarity=0.443 Sum_probs=208.6
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCC-chhhHHHHHHHHHHHHhcCCCceeeeeceEeeCC-eEEEEEEec
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGD-CGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGN-DRLLIYSYM 849 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~ 849 (1052)
++..+.||+|..|+|||++++ +++.+|+|++... .....+++.+|++++++.+||+||.++|.|.... ...++||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 344778999999999999877 7889999999644 3566789999999999999999999999999988 599999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++|+|++++.. .+.+++....+|+.++++||.|||+. .+||||||||+|||++..|++||||||.++.+...
T Consensus 161 DgGSLd~~~k~----~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-- 232 (364)
T KOG0581|consen 161 DGGSLDDILKR----VGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-- 232 (364)
T ss_pred CCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--
Confidence 99999998875 35689999999999999999999973 59999999999999999999999999999886432
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccC--CCCchhHHHHHHHhhhcccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCK--GKNCRDLVSWVFQMKSEKREVEIIDASI 1007 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
....++||..|||||.+.+..|+.++||||||++++|+.+|+.||.... .....++..++.... .....+.
T Consensus 233 -~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~p----pP~lP~~-- 305 (364)
T KOG0581|consen 233 -IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEP----PPRLPEG-- 305 (364)
T ss_pred -hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCC----CCCCCcc--
Confidence 4567899999999999999999999999999999999999999997531 112223333322211 1111111
Q ss_pred cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1008 WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..+.++..++..|+++||.+||++.|+++
T Consensus 306 ------~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 306 ------EFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred ------cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 34558999999999999999999999987
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=392.77 Aligned_cols=254 Identities=36% Similarity=0.508 Sum_probs=208.3
Q ss_pred ccCeEcccCceEEEEEEECCCcEEEEEEecCCch--hhHHHHHHHHHHHHhcCCCceeeeeceEeeCC-eEEEEEEeccC
Q 001561 775 QANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCG--QMEREFQAEVEALSRAQHKNLVSLQGYCRHGN-DRLLIYSYMEN 851 (1052)
Q Consensus 775 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~~ 851 (1052)
..+.||.|+||+||+|.|.....||||++..... ...++|.+|+.++++++|||||+++|+|.++. ...+|||||++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 3455999999999999998444599999986532 22568999999999999999999999999887 79999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC-eEEcCCCCCceEECCCC-CeEEeecccccccCCCCC
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPH-IVHRDVKSSNILLDEKF-EAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-i~HrDlkp~Nill~~~~-~~kl~DfG~a~~~~~~~~ 929 (1052)
|+|.++++.. ....+++..+.+||.|||+|+.|||+. + ||||||||+|||++.++ ++||+|||+++......
T Consensus 125 GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 125 GSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred CcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 9999999874 466799999999999999999999997 6 99999999999999997 99999999998764321
Q ss_pred eeeecccccccccCccccC--CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQ--TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASI 1007 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
...+...||+.|||||++. ...++.|+||||||+++|||+||+.||..... ......+..... ...+
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~---~~~~~~v~~~~~---Rp~~----- 267 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP---VQVASAVVVGGL---RPPI----- 267 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhcCC---CCCC-----
Confidence 2334478999999999999 66999999999999999999999999975432 122222111111 1111
Q ss_pred cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 1008 WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
+..+...+..++.+||+.||++||++.|++..|+.+..
T Consensus 268 ----p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 268 ----PKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred ----CccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 11144578899999999999999999999999987643
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-43 Score=391.57 Aligned_cols=247 Identities=26% Similarity=0.412 Sum_probs=210.7
Q ss_pred cCCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
.+|+..+.||+|||++||.++. .+|+.||+|++.+.. ....+.+.+|+++.+.++|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5799999999999999999987 789999999998632 334556889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
|+|++++|.++++ ...++++.+++.++.||+.|+.|||+. +|+|||||..|++++++.++||+|||+|..+..
T Consensus 98 ELC~~~sL~el~K----rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLK----RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHH----hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999887 356799999999999999999999997 999999999999999999999999999999875
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
+ .+...+.+|||.|.|||++....++..+||||+|||+|.|+.|++||+... -.+....+. . .+..
T Consensus 171 ~-~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~---vkety~~Ik----~---~~Y~--- 236 (592)
T KOG0575|consen 171 D-GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT---VKETYNKIK----L---NEYS--- 236 (592)
T ss_pred c-ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch---HHHHHHHHH----h---cCcc---
Confidence 4 334556899999999999999999999999999999999999999997421 111111111 1 1111
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+...+.++.+||.++++++|.+|||+++|+.
T Consensus 237 ----~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 237 ----MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ----cccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11133447899999999999999999999986
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-44 Score=377.55 Aligned_cols=256 Identities=25% Similarity=0.428 Sum_probs=207.9
Q ss_pred hcCCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCch-------hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCe
Q 001561 770 TNNFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDCG-------QMEREFQAEVEALSRAQHKNLVSLQGYCRHGND 841 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 841 (1052)
.+.|.+.+.||+|+||.|-+|.. ++|+.||||++.+... .....+++|+++|++++|||||+++++|..++.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 35688899999999999999974 5899999999975421 123346799999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCC---CCeEEeec
Q 001561 842 RLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEK---FEAHLADF 918 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~---~~~kl~Df 918 (1052)
.|+|||||+||+|.+++-. ...+.+.....+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+||
T Consensus 251 ~YmVlE~v~GGeLfd~vv~----nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVA----NKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred eEEEEEEecCccHHHHHHh----ccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEeccc
Confidence 9999999999999998874 45577788899999999999999997 99999999999999755 88999999
Q ss_pred ccccccCCCCCeeeecccccccccCccccCCcCCC---cccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhh
Q 001561 919 GLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTAT---CRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKS 995 (1052)
Q Consensus 919 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 995 (1052)
|+|+..+ ....+.+.+|||.|.|||++.+..++ .++|+||+||++|-+++|.+||....+.. .+.+.+.
T Consensus 324 GlAK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl~eQI~---- 395 (475)
T KOG0615|consen 324 GLAKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SLKEQIL---- 395 (475)
T ss_pred chhhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cHHHHHh----
Confidence 9999876 45667789999999999998765433 37899999999999999999997543322 1111111
Q ss_pred cccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhh
Q 001561 996 EKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDG 1046 (1052)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 1046 (1052)
.+. -.+.+ .......++..++|.+|+..||++||+++|+++ |++.
T Consensus 396 ~G~--y~f~p----~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~ 442 (475)
T KOG0615|consen 396 KGR--YAFGP----LQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKD 442 (475)
T ss_pred cCc--ccccC----hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhc
Confidence 111 01111 223455678999999999999999999999997 6653
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-43 Score=368.50 Aligned_cols=199 Identities=28% Similarity=0.506 Sum_probs=180.4
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCC--chhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGD--CGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
.++|...+.||.|+||+||+|+++ ++..||||.+.+. ..+..+-...|+++++.++|||||++++++.+++..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 457888888999999999999876 6899999999876 4566677899999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCC------CCeEEeeccc
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEK------FEAHLADFGL 920 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~------~~~kl~DfG~ 920 (1052)
|||+||+|.+|++. .+.+++..++.++.|+|.|+++||+. +||||||||+|||++.. -.+||+|||+
T Consensus 89 EyC~gGDLs~yi~~----~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRR----RGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999999999985 34689999999999999999999985 99999999999999864 4689999999
Q ss_pred ccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcc
Q 001561 921 SRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEV 977 (1052)
Q Consensus 921 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~ 977 (1052)
|+.+.+ .......+|+|-|||||+++..+|+.|+|+||+|+|+|||++|++||+.
T Consensus 162 AR~L~~--~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 162 ARFLQP--GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hhhCCc--hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 999863 3344567999999999999999999999999999999999999999974
No 9
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=388.59 Aligned_cols=256 Identities=28% Similarity=0.447 Sum_probs=215.3
Q ss_pred CCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 772 NFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
.++..+.||+|.||.||.|.+....+||+|.++.. ....+.|.+|+++|++++|++||+++++|..++..|||||||+.
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence 34557789999999999999997789999999755 33456789999999999999999999999998899999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|.+||+. ..+..+...+.+.++.|||+|++||+++ ++|||||.++|||++++..+||+|||+|+...++....
T Consensus 286 GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~ 360 (468)
T KOG0197|consen 286 GSLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA 360 (468)
T ss_pred CcHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCceee
Confidence 999999987 3566788999999999999999999996 99999999999999999999999999999655443333
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccch
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHK 1010 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
.....-...|.|||.+....++.|||||||||+||||+| |+.||..+...+ .++. ++.....+
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e---v~~~-------------le~GyRlp 424 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE---VLEL-------------LERGYRLP 424 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH---HHHH-------------HhccCcCC
Confidence 333344558999999999999999999999999999999 999987654222 2221 12222233
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 1011 DREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 1011 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
.+..++.++.++|..||+.+|++|||++.+...|+++..
T Consensus 425 ~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 425 RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 344566789999999999999999999999999998754
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-43 Score=353.03 Aligned_cols=256 Identities=25% Similarity=0.348 Sum_probs=209.3
Q ss_pred cCCcccCeEcccCceEEEEEE-ECCCcEEEEEEecCC--chhhHHHHHHHHHHHHhcCCCceeeeec-eEeeCCe-EEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKAT-LTNGTKAAVKRLSGD--CGQMEREFQAEVEALSRAQHKNLVSLQG-YCRHGND-RLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~lv 845 (1052)
.+|++.++||+|.||+|||+. ..+|..||.|.+.-+ ..+...+...|+.++++++|||||++++ .+.++.+ .++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 357788899999999999997 458999999988732 2445567889999999999999999999 4444444 8999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCceEECCCCCeEEeecccccc
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPH--IVHRDVKSSNILLDEKFEAHLADFGLSRL 923 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--i~HrDlkp~Nill~~~~~~kl~DfG~a~~ 923 (1052)
|||+++|+|...++......+.+++..+|+++.|+++||.++|+. .+. |+||||||.||+++.+|.||++|||+++.
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 999999999999998888888999999999999999999999984 234 89999999999999999999999999999
Q ss_pred cCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccc
Q 001561 924 LRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEII 1003 (1052)
Q Consensus 924 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
+... .......+|||.||+||.+.+.+|+.++||||+||++|||+.-++||.+. +-..+...+.+. ...
T Consensus 178 l~s~-~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~---n~~~L~~KI~qg----d~~--- 246 (375)
T KOG0591|consen 178 LSSK-TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD---NLLSLCKKIEQG----DYP--- 246 (375)
T ss_pred hcch-hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc---cHHHHHHHHHcC----CCC---
Confidence 8653 33345679999999999999999999999999999999999999999742 222222222111 111
Q ss_pred cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001561 1004 DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTW 1043 (1052)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1043 (1052)
.-.....+..+..+|..|+.+||+.||+.-.+++.
T Consensus 247 -----~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 247 -----PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred -----CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence 11124567789999999999999999985444443
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-42 Score=361.01 Aligned_cols=242 Identities=28% Similarity=0.365 Sum_probs=201.5
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
.++|++.++||+|+||+||.++.. +++.+|+|++++... ...+...+|..++.+++||+||+++..|++++..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 456999999999999999999755 688999999986542 2345678999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
+||+.||.|..+|++ .+.+++..++.++.+|+.||.|||+. +|||||+||+|||+|++|+++|+|||+++..-
T Consensus 104 ld~~~GGeLf~hL~~----eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQR----EGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EeccCCccHHHHHHh----cCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 999999999999984 56799999999999999999999986 99999999999999999999999999998643
Q ss_pred CCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
. ....+..++||+.|||||++.+..|+.++|+||+|+++|||++|.+||.... ...+........ .
T Consensus 177 ~-~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~------~~~~~~~I~~~k----~--- 242 (357)
T KOG0598|consen 177 K-DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED------VKKMYDKILKGK----L--- 242 (357)
T ss_pred c-CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc------HHHHHHHHhcCc----C---
Confidence 3 2334455899999999999999999999999999999999999999997422 111211111111 0
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCC
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRP 1035 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1035 (1052)
...+.....++.+++.+++..||++|-
T Consensus 243 ---~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 243 ---PLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ---CCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 001111234788999999999999995
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=9.7e-42 Score=343.53 Aligned_cols=261 Identities=24% Similarity=0.321 Sum_probs=207.2
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecC--CchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSG--DCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
++|+...++|+|+||+|||++.+ +|+.||||++.. +++...+-..+|++++++++|||+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46888899999999999999976 799999999863 334555667899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|++.--|++ ++. ....++.+.+.+++.|++.|+.|+|++ +++||||||+|||++..|.+|+||||+|+.+..
T Consensus 82 ~~dhTvL~e-Le~---~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~- 153 (396)
T KOG0593|consen 82 YCDHTVLHE-LER---YPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA- 153 (396)
T ss_pred ecchHHHHH-HHh---ccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC-
Confidence 998765544 333 234578899999999999999999997 999999999999999999999999999998864
Q ss_pred CCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhc----------
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSE---------- 996 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~---------- 996 (1052)
.....++++.|..|+|||.+.+ .+|..++||||+||++.||++|.+-|.+. .+.|....+....+.
T Consensus 154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~---SDiDQLy~I~ktLG~L~prhq~iF~ 230 (396)
T KOG0593|consen 154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR---SDIDQLYLIRKTLGNLIPRHQSIFS 230 (396)
T ss_pred CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc---chHHHHHHHHHHHcccCHHHHHHhc
Confidence 4556678899999999997665 78999999999999999999999998643 222322222211110
Q ss_pred -cc------ccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 997 -KR------EVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 997 -~~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+ ..+.-+++......+....-+.+++.+|++.||.+|++.+|++.
T Consensus 231 ~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 231 SNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 00 11111111112222334457889999999999999999999986
No 13
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.2e-45 Score=380.96 Aligned_cols=480 Identities=28% Similarity=0.342 Sum_probs=303.1
Q ss_pred CCcCCCeEecCCCCCCCCCcccccCCCCccEEeccCCcccCcccccccccCCccEEEccCcccCCcccccccCCcccEEE
Q 001561 108 HLNQLKLLDLSCNHLEGVVPVELSNLKQLEVLDLSHNMLSGPVSGMLAGLNLIQSLNVSSNSFNGSLFELGEFSNLAVFN 187 (1052)
Q Consensus 108 ~l~~L~~L~Ls~n~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~ 187 (1052)
.-..|+.|++++|.++ .+-..+.++..|++|++++|+++.. |++++.+..++.|+.++|+++..+.+++.+.+|+.++
T Consensus 43 ~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~~l-p~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~ 120 (565)
T KOG0472|consen 43 EQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLSQL-PAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLD 120 (565)
T ss_pred hhcchhhhhhccCchh-hccHhhhcccceeEEEeccchhhhC-CHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhh
Confidence 3345677777777777 3444677777888888888877744 4466777777888888888877777777777777777
Q ss_pred ecCCccCCccchhhhhcccccceeeccCcccccccccCCCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCCc
Q 001561 188 ISNNSFTGKLNSRIWSASKEIQILDLSMNHFMGSLQGLDHSPSLKQLHVDNNLLGGDLPDSLYSMSSLQHVSLSVNNFSG 267 (1052)
Q Consensus 188 Ls~n~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 267 (1052)
+++|.+. .++.+++ .+-.|+.++..+|++.+.|.++..+.+|..|++.+|++....|..+. ++.|++||..+|-++
T Consensus 121 ~s~n~~~-el~~~i~-~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~- 196 (565)
T KOG0472|consen 121 CSSNELK-ELPDSIG-RLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE- 196 (565)
T ss_pred cccccee-ecCchHH-HHhhhhhhhccccccccCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-
Confidence 7777776 4444443 34556777777777777777777777777778888877754444444 777788887777776
Q ss_pred hhhhhhcCCCCCcEEEccCCcCCCCCcccccCccccccccccCCcccCCCCcccccCCCCcEEEecCccccCcCCccccc
Q 001561 268 QLSEKISNLTSLRHLIIFGNQFSGKLPNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSG 347 (1052)
Q Consensus 268 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 347 (1052)
.+|+.++.+.+|..|+|..|+|. ..| .|..++.|.+|+++.|+|+-.......++++|.+|||..|+++ ..|..+.-
T Consensus 197 tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl 273 (565)
T KOG0472|consen 197 TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL 273 (565)
T ss_pred cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHH
Confidence 67777777777777788888777 555 6777777777777777777443344457777777777777777 44556666
Q ss_pred CCccceeecccccccCCCCccccCCCccceeecccccccccCchhhccCC---cCcEEe-------ccCCcC------CC
Q 001561 348 LSSLCTLDLATNHFSGPLPNSLSDCHDLKILSLAKNELSGQVPESFGKLT---SLLFLS-------LSNNSF------NH 411 (1052)
Q Consensus 348 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~---~L~~L~-------L~~N~l------~~ 411 (1052)
+.+|.+||+|+|.|+ .+|.+++++ .|+.|-+.+|.+.. +-..+-+.. -|++|. ++.-.= +.
T Consensus 274 LrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrT-iRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~ 350 (565)
T KOG0472|consen 274 LRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRT-IRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTL 350 (565)
T ss_pred hhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHH-HHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCC
Confidence 777777777777777 466777777 77777777777652 111111100 011110 000000 00
Q ss_pred CcccchhhccCcccceEeccccccCccCCccccC--CCcccEEEccCCccccCcchhhhcCCCCcE-EeCcCccCCCCCC
Q 001561 412 LSGTLSVLQQCKNLTTLILTKNFVGEEIPENVGG--FESLMVLALGNCGLKGHIPVWLLRCKKLQV-LDLSWNHFDGNIP 488 (1052)
Q Consensus 412 l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~-L~Ls~N~l~~~~p 488 (1052)
.+..+.......+.+.|+++.-+++....+.|.. -.-...++++.|++. ++|..+..++.+.+ +++++|.+ +-+|
T Consensus 351 ~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~ 428 (565)
T KOG0472|consen 351 PSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVP 428 (565)
T ss_pred CCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccch
Confidence 0111122334445566666665554322222211 112556666666665 56666655555443 33333333 3566
Q ss_pred hhhccCCCCCeEeccCCcccccCCcchhhhhhhcccCCCCCCCCCCCCccceeeccccCCCcCCCCCCCCCCeeeeecCc
Q 001561 489 PWIGQMENLFYLDFSNNTLTGEIPKSLTELKSLISSNCTSSNPTASAGIPLYVKHNRSTNGLPYNQASSFPPSVFLSNNR 568 (1052)
Q Consensus 489 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~Ls~N~ 568 (1052)
..++.+++|..|+|++|-+. .+|..++.+..| +.+++|.|+
T Consensus 429 ~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~L--------------------------------------q~LnlS~Nr 469 (565)
T KOG0472|consen 429 LELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRL--------------------------------------QTLNLSFNR 469 (565)
T ss_pred HHHHhhhcceeeecccchhh-hcchhhhhhhhh--------------------------------------heecccccc
Confidence 66666666666666666655 456555555444 345666666
Q ss_pred ccccCCcccccccccceecccCceeeecCCCCcccccCcCeeeCCCCcCCCCCCccccCccccCeeeecccccc
Q 001561 569 INGTIPPEIGQLKHLHVLDLSRNNITGTIPSSISEIRNLEVLDLSSNDLHGSIPGSFEKLTFLSKFSVANNHLQ 642 (1052)
Q Consensus 569 l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~l~l~~N~l~ 642 (1052)
|. .+|..+-.+..|+.+-.++|++....|+.+++|.+|.+|||.+|.+. .||+.++++++|++|++++|++.
T Consensus 470 Fr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 470 FR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 65 56666666666666666667776544555777777777777777776 67777777777777777777776
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=360.29 Aligned_cols=252 Identities=25% Similarity=0.358 Sum_probs=210.7
Q ss_pred HHhhcCCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCc---hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCe
Q 001561 767 LKSTNNFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDC---GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGND 841 (1052)
Q Consensus 767 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 841 (1052)
.+...+|...+.||+|+|++||+|+. .+++.||||++.+.. ....+.+.+|-++|.++ .||.|++++..|.+...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 45567899999999999999999974 478999999987653 23345678899999999 89999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccc
Q 001561 842 RLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLS 921 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a 921 (1052)
.|+|+||+++|+|.++|+. -+.+++..++.+|.+|+.|++|||+. |||||||||+|||+|+|+++||+|||.|
T Consensus 149 LYFvLe~A~nGdll~~i~K----~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsA 221 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKK----YGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSA 221 (604)
T ss_pred eEEEEEecCCCcHHHHHHH----hCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeecccc
Confidence 9999999999999999985 46799999999999999999999997 9999999999999999999999999999
Q ss_pred cccCCCCCe----------e--eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHH
Q 001561 922 RLLRPYDTH----------V--TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSW 989 (1052)
Q Consensus 922 ~~~~~~~~~----------~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~ 989 (1052)
+.+.+.... . ...++||..|.+||++.....++++|+|+||||+|+|+.|++||.. .+..-..+.
T Consensus 222 K~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra---~NeyliFqk 298 (604)
T KOG0592|consen 222 KILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA---ANEYLIFQK 298 (604)
T ss_pred ccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc---ccHHHHHHH
Confidence 987653221 1 1347999999999999999999999999999999999999999963 232223322
Q ss_pred HHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 990 VFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+.... ..+++..++.+.+|+.+.+..||.+|++..|+.+
T Consensus 299 I~~l~--------------y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 299 IQALD--------------YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHhc--------------ccCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 22111 1111222247889999999999999999988876
No 15
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.4e-41 Score=383.46 Aligned_cols=262 Identities=29% Similarity=0.477 Sum_probs=216.0
Q ss_pred cCCcccCeEcccCceEEEEEEECC------CcEEEEEEecCCchh-hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTN------GTKAAVKRLSGDCGQ-MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRL 843 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 843 (1052)
.+.+..+.||+|+||+||+|+... ..-||||.++.+... ...+|++|++++..++|||||+++|+|.+++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 344557889999999999997542 356999999877655 7789999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhcccC------C----ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCe
Q 001561 844 LIYSYMENGSLDYWLHESVD------K----DSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEA 913 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~------~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~ 913 (1052)
+|+|||..|+|.+||+.... . ..+++..+.+.||.|||.|+.||-++ ++|||||..+|+||.++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEE
Confidence 99999999999999985431 1 23488999999999999999999997 99999999999999999999
Q ss_pred EEeecccccccCCCCCeeee-cccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHH
Q 001561 914 HLADFGLSRLLRPYDTHVTT-DLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVF 991 (1052)
Q Consensus 914 kl~DfG~a~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~ 991 (1052)
||+|||+++.+-..+.+... ...-..+|||||.+..+++|+++|||||||+|||+++ |+.||.+....+. +
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV---I---- 715 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV---I---- 715 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH---H----
Confidence 99999999975433322221 2234569999999999999999999999999999999 9999976443322 2
Q ss_pred HhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCccc
Q 001561 992 QMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGIDA 1051 (1052)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1051 (1052)
.....+. + -+.++.++.+++.||..||+..|++||+++||-..|+...+++
T Consensus 716 e~i~~g~--------l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 716 ECIRAGQ--------L-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred HHHHcCC--------c-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 1122221 1 2335566778999999999999999999999999998876543
No 16
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.1e-40 Score=326.85 Aligned_cols=261 Identities=23% Similarity=0.342 Sum_probs=213.6
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
.+|...+++|+|.||.||+|+.. +|+.||||+++... ........+|++.++.++|+||+.++++|.+.+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 35777889999999999999854 89999999997542 2234557899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
||+. +|+..+++ ....++..++..++.++++|++|||+. .|+|||+||.|+|++++|.+||+|||+|+.+.+.
T Consensus 82 fm~t-dLe~vIkd---~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 82 FMPT-DLEVVIKD---KNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred eccc-cHHHHhcc---cccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 9976 78888876 566799999999999999999999986 9999999999999999999999999999998765
Q ss_pred CCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
...... .+-|..|+|||.+.+ +.|+..+|+||.|||+.||+-|.+-|. +.++-+....+++..+......+.+-.
T Consensus 155 ~~~~~~-~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fp---G~sDidQL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 155 NRIQTH-QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFP---GDSDIDQLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred Cccccc-ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCC---CCchHHHHHHHHHHcCCCCcccCcccc
Confidence 443333 377999999997655 579999999999999999999988875 445556666677665543333322211
Q ss_pred ccch--------------hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1007 IWHK--------------DREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1007 ~~~~--------------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...+ ....+...+.+++.+|+..+|.+|++++|+++
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~ 280 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK 280 (318)
T ss_pred ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence 1111 12334557799999999999999999999987
No 17
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-40 Score=346.30 Aligned_cols=266 Identities=23% Similarity=0.354 Sum_probs=213.4
Q ss_pred hcCCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCchhh-HHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDCGQM-EREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
.++|++.++||.|..++||+|+. ..++.||||++.-+.... .+.+.+|+..|+.++||||++++..|..+...|+||+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 45799999999999999999974 478999999998665433 4789999999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
||.+|++.+.+......+ +.+..+..|.+++++||.|||++ |.||||||+.|||++.+|.|||+|||.+..+...
T Consensus 105 fMa~GS~ldIik~~~~~G--l~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDG--LEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred hhcCCcHHHHHHHHcccc--ccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 999999999998876444 89999999999999999999997 9999999999999999999999999998765443
Q ss_pred CCeee---ecccccccccCccccC--CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccc
Q 001561 928 DTHVT---TDLVGTLGYIPPEYSQ--TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI 1002 (1052)
Q Consensus 928 ~~~~~---~~~~gt~~y~aPE~~~--~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
..... ..++||+.|||||+++ ...|+.|+||||||++..||.+|+.||....+-. .........+ ...
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk------vLl~tLqn~p-p~~ 252 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK------VLLLTLQNDP-PTL 252 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH------HHHHHhcCCC-CCc
Confidence 32211 4569999999999844 3478999999999999999999999997543211 1111111111 111
Q ss_pred ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 1003 IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
.......+........+.+++..|++.||++|||++++++ +++..
T Consensus 253 ~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 253 LTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred ccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence 1112222233344558899999999999999999999987 55544
No 18
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=364.57 Aligned_cols=249 Identities=24% Similarity=0.379 Sum_probs=211.7
Q ss_pred cCCcccCeEcccCceEEEEEE-ECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKAT-LTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
..|+....||+|+.|.||.|. ..+++.||||++........+-+..|+.+|+..+|+|||.+++.|...++.|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 467778889999999999997 4578999999998777777777899999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
+||+|.+.+.. ..+++.++..|..++++||+|||.. +|+|||||.+|||++.+|.+||+|||++..+.....
T Consensus 353 ~ggsLTDvVt~-----~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 353 EGGSLTDVVTK-----TRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred CCCchhhhhhc-----ccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 99999998864 3489999999999999999999986 999999999999999999999999999998875443
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
.....+|||.|||||++....|.+++||||||++++||+.|++||-.. + -++.++.....+ ..+ .
T Consensus 425 -KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE---~---PlrAlyLIa~ng-~P~-------l 489 (550)
T KOG0578|consen 425 -KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE---N---PLRALYLIATNG-TPK-------L 489 (550)
T ss_pred -ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC---C---hHHHHHHHhhcC-CCC-------c
Confidence 345679999999999999999999999999999999999999999521 1 111122222211 111 2
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..++..+..+.+++.+|++.||++||++.|+++
T Consensus 490 k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 490 KNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred CCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 233445568999999999999999999999998
No 19
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-41 Score=356.59 Aligned_cols=261 Identities=22% Similarity=0.306 Sum_probs=211.6
Q ss_pred hcCCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCchhhHHHH-HHHHHHHHhcC-CCceeeeeceEeeCC-eEEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDCGQMEREF-QAEVEALSRAQ-HKNLVSLQGYCRHGN-DRLLI 845 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~-~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~lv 845 (1052)
.++|.+.+.||.|+||.||+|+- .+|+.||||+++.....+++.. .||++.+++++ |||||++.+++.+.+ ..|+|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 45788899999999999999974 4799999999987655544433 78999999998 999999999999988 89999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
||||+. +|.+.+++. ++.+++..++.|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+|+.+.
T Consensus 89 fE~Md~-NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred HHhhhh-hHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccc
Confidence 999965 899998873 77899999999999999999999997 99999999999999998899999999999876
Q ss_pred CCCCeeeecccccccccCccc-cCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 926 PYDTHVTTDLVGTLGYIPPEY-SQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
.. ...+.++.|..|+|||+ +....|+.+.|+||+|||++|+.+=++-|.+ .+..|.+..+.+..+.........
T Consensus 162 Sk--pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG---~sE~Dqi~KIc~VLGtP~~~~~~e 236 (538)
T KOG0661|consen 162 SK--PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPG---ASEIDQIYKICEVLGTPDKDSWPE 236 (538)
T ss_pred cC--CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCC---CcHHHHHHHHHHHhCCCccccchh
Confidence 43 34567899999999996 5677899999999999999999999998864 333344444444433322211111
Q ss_pred ----------------ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1005 ----------------ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1005 ----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+.-....-..+..++.+++.+|+.+||.+|||+.|+++
T Consensus 237 g~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 237 GYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred HHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 00000111235668899999999999999999999987
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-40 Score=351.58 Aligned_cols=252 Identities=30% Similarity=0.457 Sum_probs=203.8
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCC--eEEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGN--DRLLIYS 847 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e 847 (1052)
.++...+.||+|+||+||++... +|+..|||.+........+.+.+|+.++++++|||||+++|.....+ .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 34667889999999999999866 48999999987654333566899999999999999999999855444 5889999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC-CCCeEEeecccccccCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE-KFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~-~~~~kl~DfG~a~~~~~ 926 (1052)
|+++|+|.+++.... + .+++..+..++.||++||+|||++ +|+||||||+|||++. ++.+||+|||.++....
T Consensus 97 y~~~GsL~~~~~~~g--~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYG--G-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred ccCCCcHHHHHHHcC--C-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 999999999998642 2 699999999999999999999986 9999999999999999 79999999999987763
Q ss_pred --CCCeeeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccc
Q 001561 927 --YDTHVTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEII 1003 (1052)
Q Consensus 927 --~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
..........||+.|||||++..+ ....++||||+||++.||+||++||... .+..++++..........+
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~~~~P~i- 244 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGREDSLPEI- 244 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhccCCCCCC-
Confidence 122233457899999999999853 3445999999999999999999999642 2223333433333222211
Q ss_pred cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1004 DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+...+.+..+++.+|+..+|++|||++++++
T Consensus 245 --------p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~ 275 (313)
T KOG0198|consen 245 --------PDSLSDEAKDFLRKCFKRDPEKRPTAEELLE 275 (313)
T ss_pred --------CcccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 2223447899999999999999999999987
No 21
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-40 Score=329.86 Aligned_cols=236 Identities=23% Similarity=0.315 Sum_probs=199.1
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhH---HHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQME---REFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
.+|+..+.||.|+||+|..++.+ +|..+|+|++.+...... +....|..+++.+.||+++++++.+.+.+..|+||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 35788999999999999999865 688999999987653333 34577999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||++||.|.++++. .+.+++..++.+|.||+.|++|||+. +|++||+||+|||+|++|++||+|||+|+.+..
T Consensus 124 eyv~GGElFS~Lrk----~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRK----SGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred eccCCccHHHHHHh----cCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999999985 55689999999999999999999996 999999999999999999999999999998743
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.+.+.+|||.|+|||++....+..++|+|||||++|||+.|++||.... .....+.+... ++.
T Consensus 197 ----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~---~~~iY~KI~~~-------~v~--- 259 (355)
T KOG0616|consen 197 ----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN---PIQIYEKILEG-------KVK--- 259 (355)
T ss_pred ----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC---hHHHHHHHHhC-------ccc---
Confidence 2566899999999999999999999999999999999999999997432 22222222211 111
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCC
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRR 1034 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~R 1034 (1052)
++.....++.+|+.+.++.|-.+|
T Consensus 260 ----fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 260 ----FPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred ----CCcccCHHHHHHHHHHHhhhhHhh
Confidence 112223368899999999999988
No 22
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-40 Score=352.64 Aligned_cols=262 Identities=26% Similarity=0.344 Sum_probs=209.5
Q ss_pred cCCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC--CeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG--NDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 845 (1052)
..|+..+.||+|+||.||+|+. .+|+.||+|+++-+. .....-..+|+.+|+++.||||+++.+...+. ...|+|
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 3477788899999999999975 489999999987554 34445578999999999999999999998876 689999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
+|||+. +|.-++.. .+..+++.++..++.|+++||+|+|+. +|+|||||.+|||+|.+|.+||+|||+|+++.
T Consensus 197 FeYMdh-DL~GLl~~---p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSS---PGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred Eecccc-hhhhhhcC---CCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeecc
Confidence 999987 56666653 456799999999999999999999996 99999999999999999999999999999988
Q ss_pred CCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccc-
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEII- 1003 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1003 (1052)
.......+..+-|..|+|||++.+ ..|+.++|+||.|||+.||++|++.|.+ .+..+.+..++..........+.
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G---~tEveQl~kIfklcGSP~e~~W~~ 346 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQG---RTEVEQLHKIFKLCGSPTEDYWPV 346 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCC---ccHHHHHHHHHHHhCCCChhcccc
Confidence 777666777889999999997655 5799999999999999999999999974 33444444455443322211111
Q ss_pred ---------cccccchh-----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1004 ---------DASIWHKD-----REKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1004 ---------~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+...... .........+|+..++..||.+|.|+.++++
T Consensus 347 ~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 347 SKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 11000000 1112346789999999999999999999986
No 23
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.2e-43 Score=369.10 Aligned_cols=480 Identities=25% Similarity=0.359 Sum_probs=397.6
Q ss_pred EEEEEecCCCCcccCCccccCCcCCCeEecCCCCCCCCCcccccCCCCccEEeccCCcccCcccccccccCCccEEEccC
Q 001561 88 VTMLILPRKGLKGIIPRSLGHLNQLKLLDLSCNHLEGVVPVELSNLKQLEVLDLSHNMLSGPVSGMLAGLNLIQSLNVSS 167 (1052)
Q Consensus 88 v~~l~L~~~~l~g~~~~~l~~l~~L~~L~Ls~n~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~ 167 (1052)
...+.+++|.+... .+.+.++..|..|++++|++. ..|.+++.+..++.|+.|+|+++ .+|.....+.+|+.|++++
T Consensus 47 l~~lils~N~l~~l-~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLEVL-REDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchhhc-cHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 45678889988864 456899999999999999998 67889999999999999999998 5667889999999999999
Q ss_pred cccCCcccccccCCcccEEEecCCccCCccchhhhhcccccceeeccCcccccccccCCCCCCCCEEEcccccCCCCCCc
Q 001561 168 NSFNGSLFELGEFSNLAVFNISNNSFTGKLNSRIWSASKEIQILDLSMNHFMGSLQGLDHSPSLKQLHVDNNLLGGDLPD 247 (1052)
Q Consensus 168 N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~l~~~~~L~~L~L~~N~l~~~~p~ 247 (1052)
|.+...+.+++.+..|..++..+|+++ .+|..++ .+.+|..+++.+|+++..++..-.++.|++||+..|.++ .+|.
T Consensus 124 n~~~el~~~i~~~~~l~dl~~~~N~i~-slp~~~~-~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~ 200 (565)
T KOG0472|consen 124 NELKELPDSIGRLLDLEDLDATNNQIS-SLPEDMV-NLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPP 200 (565)
T ss_pred cceeecCchHHHHhhhhhhhccccccc-cCchHHH-HHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCCh
Confidence 999999999999999999999999999 5555543 467899999999999999988777999999999999998 7899
Q ss_pred cccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEccCCcCCCCCcccc-cCccccccccccCCcccCCCCcccccCCC
Q 001561 248 SLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFGNQFSGKLPNVL-GNLTQLEFFVAHSNSFSGPLPLSLSLCSK 326 (1052)
Q Consensus 248 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~~~~l~~l~~ 326 (1052)
.++.+.+|+-|+|.+|++. ..| .|.+++.|++|+++.|+|+ .+|... .+++++..||+.+|+++ ..|+.+..+.+
T Consensus 201 ~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrs 276 (565)
T KOG0472|consen 201 ELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRS 276 (565)
T ss_pred hhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhh
Confidence 9999999999999999998 666 8999999999999999999 666665 49999999999999999 77999999999
Q ss_pred CcEEEecCccccCcCCcccccCCccceeecccccccCCCCccccCCC---ccceeec-------cccc----cccc-Cch
Q 001561 327 LHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPLPNSLSDCH---DLKILSL-------AKNE----LSGQ-VPE 391 (1052)
Q Consensus 327 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~---~L~~L~L-------~~N~----l~~~-~p~ 391 (1052)
|+.||+++|.+++ .|..++++ .|+.|.+.+|.+.. +-..+-+.. -|++|.= +.-. -++. .+.
T Consensus 277 L~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrT-iRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~ 353 (565)
T KOG0472|consen 277 LERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRT-IRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSE 353 (565)
T ss_pred hhhhcccCCcccc-CCcccccc-eeeehhhcCCchHH-HHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCC
Confidence 9999999999995 56688999 99999999999873 222222211 1222211 1110 0011 111
Q ss_pred ---hhccCCcCcEEeccCCcCCCCcccchhhccCcccceEeccccccCccCCccccCCCcccEEEccCCccccCcchhhh
Q 001561 392 ---SFGKLTSLLFLSLSNNSFNHLSGTLSVLQQCKNLTTLILTKNFVGEEIPENVGGFESLMVLALGNCGLKGHIPVWLL 468 (1052)
Q Consensus 392 ---~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 468 (1052)
....+.+.+.|++++-+++.+|..+....+-.-.+..+++.|++ .++|..+..+..+.+.-+.+|+..+.+|..++
T Consensus 354 ~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL-~elPk~L~~lkelvT~l~lsnn~isfv~~~l~ 432 (565)
T KOG0472|consen 354 SFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQL-CELPKRLVELKELVTDLVLSNNKISFVPLELS 432 (565)
T ss_pred cccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchH-hhhhhhhHHHHHHHHHHHhhcCccccchHHHH
Confidence 12345678899999999999988766555556688899999998 57888888877776554444444559999999
Q ss_pred cCCCCcEEeCcCccCCCCCChhhccCCCCCeEeccCCcccccCCcchhhhhhhcccCCCCCCCCCCCCccceeeccccCC
Q 001561 469 RCKKLQVLDLSWNHFDGNIPPWIGQMENLFYLDFSNNTLTGEIPKSLTELKSLISSNCTSSNPTASAGIPLYVKHNRSTN 548 (1052)
Q Consensus 469 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (1052)
.+++|..|+|++|.+. .+|..++.+..|+.||+|.|+|. .+|+.+..+..+.
T Consensus 433 ~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lE-------------------------- 484 (565)
T KOG0472|consen 433 QLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLE-------------------------- 484 (565)
T ss_pred hhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHH--------------------------
Confidence 9999999999999998 89999999999999999999997 6888777666552
Q ss_pred CcCCCCCCCCCCeeeeecCcccccCCcccccccccceecccCceeeecCCCCcccccCcCeeeCCCCcCCCCCCcc
Q 001561 549 GLPYNQASSFPPSVFLSNNRINGTIPPEIGQLKHLHVLDLSRNNITGTIPSSISEIRNLEVLDLSSNDLHGSIPGS 624 (1052)
Q Consensus 549 ~l~~~~~~~~~~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~LdLs~N~l~g~~p~~ 624 (1052)
.+..++|++...-|..+++|.+|..|||.+|.|. .||..+++|++|++|+|++|+|. .|+.
T Consensus 485 ------------tllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr--~Pr~ 545 (565)
T KOG0472|consen 485 ------------TLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR--QPRH 545 (565)
T ss_pred ------------HHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC--CCHH
Confidence 2334668887655656999999999999999999 89999999999999999999998 5543
No 24
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=360.41 Aligned_cols=366 Identities=25% Similarity=0.200 Sum_probs=304.4
Q ss_pred EEeccCCcccCcccccccccCCccEEEccCcccCCcccccccCCcccEEEecCCccCCccchhhhhcccccceeeccCcc
Q 001561 138 VLDLSHNMLSGPVSGMLAGLNLIQSLNVSSNSFNGSLFELGEFSNLAVFNISNNSFTGKLNSRIWSASKEIQILDLSMNH 217 (1052)
Q Consensus 138 ~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~Ls~n~ 217 (1052)
.||+|+|.++...+..|.++++|+++++.+|.++.+|.-.....+|+.|+|.+|.|+ .+..+-...++.|+.||||.|.
T Consensus 82 ~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~~~sghl~~L~L~~N~I~-sv~se~L~~l~alrslDLSrN~ 160 (873)
T KOG4194|consen 82 TLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRFGHESGHLEKLDLRHNLIS-SVTSEELSALPALRSLDLSRNL 160 (873)
T ss_pred eeeccccccccCcHHHHhcCCcceeeeeccchhhhcccccccccceeEEeeeccccc-cccHHHHHhHhhhhhhhhhhch
Confidence 344444444444444444444444444444444444443444445666666666666 5566667777888888888888
Q ss_pred cccccc-cCCCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEccCCcCCCCCccc
Q 001561 218 FMGSLQ-GLDHSPSLKQLHVDNNLLGGDLPDSLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFGNQFSGKLPNV 296 (1052)
Q Consensus 218 l~~~~~-~l~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 296 (1052)
|+.++. .+..-.++++|+|++|.|+....+.|.++.+|..|.|++|+++...+..|.+|++|+.|+|..|+|.-.---.
T Consensus 161 is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~lt 240 (873)
T KOG4194|consen 161 ISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLT 240 (873)
T ss_pred hhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhh
Confidence 888874 5666689999999999999988999999999999999999999888889999999999999999998544667
Q ss_pred ccCccccccccccCCcccCCCCcccccCCCCcEEEecCccccCcCCcccccCCccceeecccccccCCCCccccCCCccc
Q 001561 297 LGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPLPNSLSDCHDLK 376 (1052)
Q Consensus 297 ~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 376 (1052)
|.++++|+.|.|..|.++......|..+.++++|+|..|++...-...+.+++.|+.|+||+|.|...-++....+++|+
T Consensus 241 FqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~ 320 (873)
T KOG4194|consen 241 FQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLK 320 (873)
T ss_pred hcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccce
Confidence 89999999999999999988888999999999999999999988888889999999999999999988899999999999
Q ss_pred eeecccccccccCchhhccCCcCcEEeccCCcCCCCcccchhhccCcccceEeccccccCccCC---ccccCCCcccEEE
Q 001561 377 ILSLAKNELSGQVPESFGKLTSLLFLSLSNNSFNHLSGTLSVLQQCKNLTTLILTKNFVGEEIP---ENVGGFESLMVLA 453 (1052)
Q Consensus 377 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~ 453 (1052)
+|+|++|+|+...+..|..|+.|++|+|++|++..+.. ..|..+++|++|||++|.+...+- ..|.++++|+.|+
T Consensus 321 ~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e--~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~ 398 (873)
T KOG4194|consen 321 ELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAE--GAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLR 398 (873)
T ss_pred eEeccccccccCChhHHHHHHHhhhhcccccchHHHHh--hHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhee
Confidence 99999999998889999999999999999999998865 467889999999999999876544 4678899999999
Q ss_pred ccCCccccCcchhhhcCCCCcEEeCcCccCCCCCChhhccCCCCCeEeccCCcc
Q 001561 454 LGNCGLKGHIPVWLLRCKKLQVLDLSWNHFDGNIPPWIGQMENLFYLDFSNNTL 507 (1052)
Q Consensus 454 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 507 (1052)
|.+|+|+...-.+|.+++.|+.|||.+|.|...-|.+|..| +|+.|-+..-.+
T Consensus 399 l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssf 451 (873)
T KOG4194|consen 399 LTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSF 451 (873)
T ss_pred ecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccce
Confidence 99999997777889999999999999999988889999998 899888865443
No 25
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.8e-39 Score=351.01 Aligned_cols=246 Identities=26% Similarity=0.380 Sum_probs=208.6
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
++|.+.+.||+|.||+||||+.+ +.+.||+|.+.+.. .+..+.+.+|++++++++|||||.++++|+...+.|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 56888899999999999999855 68899999987553 3344668999999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+.| +|..++.. ++.++++.+..++.+++.||.|||+. +|.|||+||+|||++..|.+|+||||+|+.+..
T Consensus 82 ~a~g-~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~- 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ----DGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST- 152 (808)
T ss_pred hhhh-hHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc-
Confidence 9987 99999874 66799999999999999999999997 999999999999999999999999999998765
Q ss_pred CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASI 1007 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
...+.+...|||-|||||++.++.|+..+|.||+||++||+++|++||.. ..+.+-+.....+. .
T Consensus 153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a------~si~~Lv~~I~~d~--------v- 217 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA------RSITQLVKSILKDP--------V- 217 (808)
T ss_pred CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH------HHHHHHHHHHhcCC--------C-
Confidence 45556678899999999999999999999999999999999999999952 12222222222111 0
Q ss_pred cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1008 WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.++......+..++...+.+||.+|.+..+++.
T Consensus 218 --~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 218 --KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred --CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 112244457889999999999999999999875
No 26
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=372.27 Aligned_cols=257 Identities=28% Similarity=0.480 Sum_probs=215.4
Q ss_pred CCcccCeEcccCceEEEEEEEC-C---CcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-N---GTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~---g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
...+.++||.|.||.||+|+++ . ...||||.++... .+...+|..|+.+|.++.||||+++.|+.......+||.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 3466889999999999999876 2 3579999998554 445578999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
|||++|+|+.||+.. ++.+++.+...|..+||.|++||-++ ++|||||.++|||++.+..+||+|||+++.+.+
T Consensus 710 EyMENGsLDsFLR~~---DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQN---DGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred hhhhCCcHHHHHhhc---CCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeeccc
Confidence 999999999999874 56699999999999999999999987 999999999999999999999999999998765
Q ss_pred CCCeeeecccc--cccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccc
Q 001561 927 YDTHVTTDLVG--TLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEII 1003 (1052)
Q Consensus 927 ~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
+.....+..-| ..+|.|||.+..++++.++||||||++|||.++ |++||-.+.. ++.+.. +
T Consensus 784 d~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN---QdVIka-------------I 847 (996)
T KOG0196|consen 784 DPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVIKA-------------I 847 (996)
T ss_pred CCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch---HHHHHH-------------H
Confidence 54333333323 358999999999999999999999999999887 9999865432 222221 2
Q ss_pred cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCcc
Q 001561 1004 DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGID 1050 (1052)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1050 (1052)
......+.+.+++..+.+||..||++|-.+||.+.|++..|..+-.+
T Consensus 848 e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 848 EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 22233344566777999999999999999999999999999887544
No 27
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-38 Score=354.27 Aligned_cols=250 Identities=28% Similarity=0.382 Sum_probs=205.5
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCC----ch-hhHHHHHHHHHHHHhcC-CCceeeeeceEeeCCe
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGD----CG-QMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGND 841 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 841 (1052)
..++|.+.+.||+|+||+|+.|... ++..||+|++... .. ...+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 4568999999999999999999754 7899999977653 12 34556779999999998 9999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCC-CCeEEeeccc
Q 001561 842 RLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEK-FEAHLADFGL 920 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~-~~~kl~DfG~ 920 (1052)
.|+||||+.||+|.+++.. ..++.+.++.+++.|++.|++|+|+. +|+||||||+||++|.+ +.+||+|||+
T Consensus 95 ~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred EEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccc
Confidence 9999999999999999975 45688899999999999999999996 99999999999999999 9999999999
Q ss_pred ccccCCCCCeeeecccccccccCccccCCcC-CC-cccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc
Q 001561 921 SRLLRPYDTHVTTDLVGTLGYIPPEYSQTLT-AT-CRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 921 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
+.... .......+.+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||+. .+...+...+. ...-.
T Consensus 168 s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d---~~~~~l~~ki~--~~~~~ 241 (370)
T KOG0583|consen 168 SAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD---SNVPNLYRKIR--KGEFK 241 (370)
T ss_pred ccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC---ccHHHHHHHHh--cCCcc
Confidence 99874 2233445679999999999999877 76 689999999999999999999974 22222221110 00000
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 999 EVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
....+. +.++..++.+|+.++|.+|+++.|+++
T Consensus 242 ~p~~~~-----------S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 242 IPSYLL-----------SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred CCCCcC-----------CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 111110 447899999999999999999999985
No 28
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=9.2e-39 Score=347.44 Aligned_cols=252 Identities=26% Similarity=0.319 Sum_probs=204.9
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchh---hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQ---MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
..++|+..++||+|+||.||.|+.+ +|+.+|+|++++..-. ..+.+..|-.+|....+|.||+++..|.+.+..||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4578999999999999999999754 7999999999866422 23457789999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
||||++||++..+|.. .+.++++.++.++.+++-|+..+|+. |+|||||||+|+|||..|++||+|||++.-+
T Consensus 219 iMEylPGGD~mTLL~~----~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMR----KDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEecCCccHHHHHHh----cCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchh
Confidence 9999999999998874 56799999999999999999999997 9999999999999999999999999998643
Q ss_pred CCC----------------------C-C----ee-------------------eecccccccccCccccCCcCCCcccch
Q 001561 925 RPY----------------------D-T----HV-------------------TTDLVGTLGYIPPEYSQTLTATCRGDV 958 (1052)
Q Consensus 925 ~~~----------------------~-~----~~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv 958 (1052)
... + . .. ....+|||.|||||++.+..|+..+|+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 210 0 0 00 012389999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcccCCC-CchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCC-
Q 001561 959 YSFGVVLLELLTGRRPVEVCKGK-NCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPF- 1036 (1052)
Q Consensus 959 wslGvil~elltG~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs- 1036 (1052)
||+|||+|||+.|.+||...... ..+.++.|........ ......++.++|.+|+. ||++|-.
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~--------------~~~~s~eA~DLI~rll~-d~~~RLG~ 436 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE--------------EVDLSDEAKDLITRLLC-DPENRLGS 436 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC--------------cCcccHHHHHHHHHHhc-CHHHhcCc
Confidence 99999999999999999754432 2345555543322111 11122478999999999 9999975
Q ss_pred --HHHHHH
Q 001561 1037 --IEEVVT 1042 (1052)
Q Consensus 1037 --~~evl~ 1042 (1052)
+.||.+
T Consensus 437 ~G~~EIK~ 444 (550)
T KOG0605|consen 437 KGAEEIKK 444 (550)
T ss_pred ccHHHHhc
Confidence 555543
No 29
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-39 Score=315.42 Aligned_cols=265 Identities=25% Similarity=0.324 Sum_probs=217.1
Q ss_pred hhcCCcccCeEcccCceEEEEEE-ECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCC-----eE
Q 001561 769 STNNFNQANIIGCGGFGLVYKAT-LTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGN-----DR 842 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 842 (1052)
..++|++.+.+|+|||+.||.++ ..++..+|+|++.....+..+...+|++..++++|||+++++++...+. ..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 34689999999999999999997 5678999999998777777788999999999999999999999875443 48
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
|++++|...|+|.+.++....++..+++.+.++|+.++++||++||+. +++++||||||.||++.+++.+++.|||.++
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 999999999999999998887888999999999999999999999986 5679999999999999999999999999998
Q ss_pred ccCCCCCee--------eecccccccccCccccC---CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHH
Q 001561 923 LLRPYDTHV--------TTDLVGTLGYIPPEYSQ---TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVF 991 (1052)
Q Consensus 923 ~~~~~~~~~--------~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~ 991 (1052)
...-..... .....-|..|+|||.+. +...++++|||||||++|+|+.|..||+...
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~------------ 245 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY------------ 245 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh------------
Confidence 754221110 11235688999999765 4466889999999999999999999997321
Q ss_pred HhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 992 QMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
+ .+......+..+.+..+.....++.+.+++.+|+++||.+||++.+++..++++
T Consensus 246 ~-~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 246 Q-QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred h-cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1 111122233333333333333667899999999999999999999999988765
No 30
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-39 Score=353.96 Aligned_cols=250 Identities=26% Similarity=0.370 Sum_probs=211.6
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
+-|+..+.||+|+.|.|..|++. +|+.+|||++.+.. ......+.+|+-+|+.+.||||+++++++++..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 45788999999999999999865 89999999997653 122345789999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|.|++++-. .+++++.++.+++.||+.|+.|+|.. +|+|||+||+|+|+|..+++||+|||+|..-.
T Consensus 92 Eyv~gGELFdylv~----kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~- 163 (786)
T KOG0588|consen 92 EYVPGGELFDYLVR----KGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV- 163 (786)
T ss_pred EecCCchhHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc-
Confidence 99999999999974 56789999999999999999999998 99999999999999999999999999997643
Q ss_pred CCCeeeecccccccccCccccCCcCCC-cccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTAT-CRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
....-.+.||+|.|.|||++.+.+|. .++||||.|||+|.|+||+.||+ +++.+.+...+.+..-
T Consensus 164 -~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd---DdNir~LLlKV~~G~f---------- 229 (786)
T KOG0588|consen 164 -PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD---DDNIRVLLLKVQRGVF---------- 229 (786)
T ss_pred -CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC---CccHHHHHHHHHcCcc----------
Confidence 23344567999999999999999885 68999999999999999999997 4555555544432211
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhh
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDG 1046 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 1046 (1052)
..+...+.++++|+++|+..||++|.|+.||++ +|..
T Consensus 230 ----~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 230 ----EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSG 268 (786)
T ss_pred ----cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence 111233447899999999999999999999987 5543
No 31
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=8.1e-38 Score=355.06 Aligned_cols=263 Identities=26% Similarity=0.420 Sum_probs=205.1
Q ss_pred hcCCcccCeEcccCceEEEEEEE------CCCcEEEEEEecCCc-hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCC-
Q 001561 770 TNNFNQANIIGCGGFGLVYKATL------TNGTKAAVKRLSGDC-GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGN- 840 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~- 840 (1052)
.++|++.+.||+|+||.||+|.+ .+++.||+|++.... ....+.+.+|++++.++ +||||++++++|.+.+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 45789999999999999999974 235689999987543 23345688999999999 8999999999887654
Q ss_pred eEEEEEEeccCCChhhhhhcccCC--------------------------------------------------------
Q 001561 841 DRLLIYSYMENGSLDYWLHESVDK-------------------------------------------------------- 864 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~~-------------------------------------------------------- 864 (1052)
..++||||+++|+|.+++......
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 578999999999999998753210
Q ss_pred --ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee-eecccccccc
Q 001561 865 --DSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV-TTDLVGTLGY 941 (1052)
Q Consensus 865 --~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y 941 (1052)
..++++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++......... .....+++.|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 13578899999999999999999986 99999999999999999999999999998654322211 1233566789
Q ss_pred cCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHH
Q 001561 942 IPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEML 1020 (1052)
Q Consensus 942 ~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1020 (1052)
+|||++.+..++.++|||||||++|||++ |+.||...... ......+ . ...... .+......+.
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~--~~~~~~~---~-~~~~~~---------~~~~~~~~l~ 307 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN--EEFCQRL---K-DGTRMR---------APENATPEIY 307 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHHHH---h-cCCCCC---------CCCCCCHHHH
Confidence 99999988899999999999999999997 99999643211 1111111 1 111000 0112234688
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHhhcCcc
Q 001561 1021 EIACKCIDQDPRRRPFIEEVVTWLDGIGID 1050 (1052)
Q Consensus 1021 ~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1050 (1052)
+++.+|++.||++||++.|+++.|+++..+
T Consensus 308 ~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 308 RIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999999987653
No 32
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-39 Score=343.16 Aligned_cols=247 Identities=27% Similarity=0.395 Sum_probs=207.8
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchh-hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQ-MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.|+..+.||+|.||.||+|... +++.||+|++..+..+ ..+++++|+.++..++++||.++++.+..+...+++|||+
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 4677789999999999999754 7899999999866543 3467899999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
.||++.+.++. +..+.+.....++.++..|+.|+|++ +.+|||||+.||++..+|.||++|||.+.++.....
T Consensus 94 ~gGsv~~lL~~----~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 94 GGGSVLDLLKS----GNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred cCcchhhhhcc----CCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhh
Confidence 99999988863 44457788888999999999999997 999999999999999999999999999988765433
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
. ..+++|||.|||||++....|+.|+||||||++.+||.+|.+|+....+ ....-.+.+....
T Consensus 167 r-r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP----------------mrvlflIpk~~PP 229 (467)
T KOG0201|consen 167 R-RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP----------------MRVLFLIPKSAPP 229 (467)
T ss_pred c-cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc----------------ceEEEeccCCCCC
Confidence 3 3678999999999999988999999999999999999999999864321 1111222222222
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.........+.+++..|++++|+.||++.++++
T Consensus 230 ~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 230 RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred ccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 223355568999999999999999999999987
No 33
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=350.97 Aligned_cols=388 Identities=23% Similarity=0.220 Sum_probs=328.0
Q ss_pred ceeeccCcccccccc-cCCC--CCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEcc
Q 001561 209 QILDLSMNHFMGSLQ-GLDH--SPSLKQLHVDNNLLGGDLPDSLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIF 285 (1052)
Q Consensus 209 ~~L~Ls~n~l~~~~~-~l~~--~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 285 (1052)
..||++++++..+.. .+.. ++.-+.|++++|+++.+.+..|.++++|++++|.+|.++ .+|.......+|+.|+|.
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLR 133 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeee
Confidence 445666666654321 1211 245667999999999888888999999999999999998 778777777789999999
Q ss_pred CCcCCCCCcccccCccccccccccCCcccCCCCcccccCCCCcEEEecCccccCcCCcccccCCccceeecccccccCCC
Q 001561 286 GNQFSGKLPNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPL 365 (1052)
Q Consensus 286 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 365 (1052)
+|.|+.+-.+.+.-++.|+.|||+.|.|+...-.+|..-.++++|+|++|+|+......|.++.+|.+|.|+.|+++...
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp 213 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLP 213 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccC
Confidence 99999888888899999999999999999776677888788999999999999998999999999999999999999777
Q ss_pred CccccCCCccceeecccccccccCchhhccCCcCcEEeccCCcCCCCcccchhhccCcccceEeccccccCccCCccccC
Q 001561 366 PNSLSDCHDLKILSLAKNELSGQVPESFGKLTSLLFLSLSNNSFNHLSGTLSVLQQCKNLTTLILTKNFVGEEIPENVGG 445 (1052)
Q Consensus 366 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 445 (1052)
+..|.++++|+.|+|..|+|.-.---.|..|++|+.|.|..|.+..+.++ .|..|.++++|+|+.|++...-..++.+
T Consensus 214 ~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG--~Fy~l~kme~l~L~~N~l~~vn~g~lfg 291 (873)
T KOG4194|consen 214 QRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDG--AFYGLEKMEHLNLETNRLQAVNEGWLFG 291 (873)
T ss_pred HHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCc--ceeeecccceeecccchhhhhhcccccc
Confidence 78898899999999999999844356789999999999999999988764 5788999999999999998888888999
Q ss_pred CCcccEEEccCCccccCcchhhhcCCCCcEEeCcCccCCCCCChhhccCCCCCeEeccCCcccccCCcchhhhhhhcccC
Q 001561 446 FESLMVLALGNCGLKGHIPVWLLRCKKLQVLDLSWNHFDGNIPPWIGQMENLFYLDFSNNTLTGEIPKSLTELKSLISSN 525 (1052)
Q Consensus 446 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~ 525 (1052)
+.+|+.|+|++|.|...-++...-.++|++|+|++|+++..-+..|..|..|+.|+|++|.++..-...|..+++|
T Consensus 292 Lt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL---- 367 (873)
T KOG4194|consen 292 LTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSL---- 367 (873)
T ss_pred cchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhh----
Confidence 9999999999999998888888889999999999999997778889999999999999999887666677777777
Q ss_pred CCCCCCCCCCCccceeeccccCCCcCCCCCCCCCCeeeeecCcccccCCc---ccccccccceecccCceeeecCCCCcc
Q 001561 526 CTSSNPTASAGIPLYVKHNRSTNGLPYNQASSFPPSVFLSNNRINGTIPP---EIGQLKHLHVLDLSRNNITGTIPSSIS 602 (1052)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~Ls~N~l~g~ip~---~~~~l~~L~~L~Ls~N~l~g~ip~~~~ 602 (1052)
++|||++|.+++.|-+ .|.+|++|+.|+|.+|+|....-..|.
T Consensus 368 ----------------------------------~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfs 413 (873)
T KOG4194|consen 368 ----------------------------------HKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFS 413 (873)
T ss_pred ----------------------------------hhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhc
Confidence 4578889998877654 467899999999999999955557899
Q ss_pred cccCcCeeeCCCCcCCCCCCccccCccccCeeeecc
Q 001561 603 EIRNLEVLDLSSNDLHGSIPGSFEKLTFLSKFSVAN 638 (1052)
Q Consensus 603 ~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~l~l~~ 638 (1052)
.+.+|+.|||.+|.|...-|..|..+ .|+.|-+..
T Consensus 414 gl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 414 GLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred cCcccceecCCCCcceeecccccccc-hhhhhhhcc
Confidence 99999999999999988888889888 888876643
No 34
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=344.55 Aligned_cols=240 Identities=26% Similarity=0.445 Sum_probs=202.5
Q ss_pred cCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCChh
Q 001561 776 ANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSLD 855 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 855 (1052)
.+-||.|+.|.||.|+++ ++.||||+++. .-+.+++-+++++||||+.+.|+|.+...++||||||..|.|.
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~e-------lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVRE-------LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhh-------hhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 567999999999999987 88999998752 2245788899999999999999999999999999999999999
Q ss_pred hhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeeeecc
Q 001561 856 YWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTDL 935 (1052)
Q Consensus 856 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 935 (1052)
..|+ .+..++......|..+||.|+.|||.+ .|||||||.-||||..+..|||+|||-++..... .....+
T Consensus 201 ~VLk----a~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSF 271 (904)
T KOG4721|consen 201 EVLK----AGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSF 271 (904)
T ss_pred HHHh----ccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhh
Confidence 9997 467789999999999999999999998 9999999999999999999999999999887543 223457
Q ss_pred cccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHH
Q 001561 936 VGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQ 1015 (1052)
Q Consensus 936 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1015 (1052)
+||..|||||++...+.+.|+||||||||||||+||..||.... ...+-| -+-...+....+..+
T Consensus 272 aGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd----ssAIIw-----------GVGsNsL~LpvPstc 336 (904)
T KOG4721|consen 272 AGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD----SSAIIW-----------GVGSNSLHLPVPSTC 336 (904)
T ss_pred hhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc----hheeEE-----------eccCCcccccCcccC
Confidence 99999999999999999999999999999999999999985211 000101 111122233445567
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1016 LLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1016 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
+..+.-|+++||+-.|..||++++++.-|+-.
T Consensus 337 P~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 337 PDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred chHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 77899999999999999999999999877543
No 35
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-39 Score=380.87 Aligned_cols=262 Identities=30% Similarity=0.450 Sum_probs=212.5
Q ss_pred hcCCcccCeEcccCceEEEEEEEC--CCc----EEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT--NGT----KAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDR 842 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~--~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 842 (1052)
....+..+.||+|+||.||+|... +|. .||+|.+.+.. .+.+.+|.+|..+|++++|||||+++|+|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 345667889999999999999865 343 48999887654 55667899999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhcccC---CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecc
Q 001561 843 LLIYSYMENGSLDYWLHESVD---KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFG 919 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG 919 (1052)
++++|||++|+|..||++.+. ....++..+.+.++.|||+|+.||++. ++|||||.++|+|+++...|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccc
Confidence 999999999999999997532 245689999999999999999999985 99999999999999999999999999
Q ss_pred cccccCCCCCeeeecc-cccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcc
Q 001561 920 LSRLLRPYDTHVTTDL-VGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEK 997 (1052)
Q Consensus 920 ~a~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
+|+.+-..+....... .-...|||||.+..+.++.|+|||||||++||++| |..||..... .+... ......
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n---~~v~~---~~~~gg 921 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN---FEVLL---DVLEGG 921 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch---HHHHH---HHHhCC
Confidence 9996543332222222 23358999999999999999999999999999999 9999964321 11111 111111
Q ss_pred cccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCcc
Q 001561 998 REVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGID 1050 (1052)
Q Consensus 998 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1050 (1052)
..+.+..++..++++|..||+.+|++||++..+++.++.|..+
T Consensus 922 ----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 922 ----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred ----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 1223345566899999999999999999999999998887554
No 36
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-38 Score=348.89 Aligned_cols=242 Identities=24% Similarity=0.325 Sum_probs=202.0
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 844 (1052)
.++|...++||+|.||+|++|..+ +++.+|||+++++.. ...+..+.|.+++... +||.++.++..|...++.|.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 457999999999999999999866 688999999987752 3345677888888888 59999999999999999999
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
||||+.||++..+.+ .+.+++..+..+|..|+.||+|||++ +|||||||.+|||+|.+|++||+|||+++..
T Consensus 447 vmey~~Ggdm~~~~~-----~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIH-----TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEecCCCcEEEEEe-----cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccccccccc
Confidence 999999999555443 45689999999999999999999986 9999999999999999999999999999874
Q ss_pred CCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 925 RPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 925 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
.- ....+.+++|||.|||||++.+..|+.++|+|||||+||||+.|..||.+ ++.+++.+.+....
T Consensus 519 m~-~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g---ddEee~FdsI~~d~---------- 584 (694)
T KOG0694|consen 519 MG-QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG---DDEEEVFDSIVNDE---------- 584 (694)
T ss_pred CC-CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC---CCHHHHHHHHhcCC----------
Confidence 42 23356779999999999999999999999999999999999999999974 33333333222111
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCH
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFI 1037 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1037 (1052)
..++...+.+...++++++.++|++|--+
T Consensus 585 ----~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 585 ----VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ----CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 11222334578899999999999999866
No 37
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-38 Score=345.59 Aligned_cols=260 Identities=29% Similarity=0.480 Sum_probs=207.3
Q ss_pred hhcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
..+.+.+.+.||+|.||+||+|+|. -.||||++..+. .+..+.|+.|+.++++-+|.||+-+.|||..+.. .||+
T Consensus 390 p~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiT 466 (678)
T KOG0193|consen 390 PPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIIT 466 (678)
T ss_pred CHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeee
Confidence 3445667889999999999999986 368999987654 4455789999999999999999999999998877 9999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
.+++|.+|+.++|.. +..++..+.+.||.|||+|+.|||. ++|||||+|..||++.+++.|||+|||++..-..
T Consensus 467 qwCeGsSLY~hlHv~---etkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~ 540 (678)
T KOG0193|consen 467 QWCEGSSLYTHLHVQ---ETKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTR 540 (678)
T ss_pred hhccCchhhhhccch---hhhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeeeee
Confidence 999999999999973 4678999999999999999999998 5999999999999999999999999999976432
Q ss_pred C-CCeeeecccccccccCccccCC---cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccc
Q 001561 927 Y-DTHVTTDLVGTLGYIPPEYSQT---LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI 1002 (1052)
Q Consensus 927 ~-~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
- .........|...|||||++.. .+|++.+||||||+++|||+||..||.. +..+.+-| +...+.. .
T Consensus 541 w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi----~~~dqIif---mVGrG~l--~ 611 (678)
T KOG0193|consen 541 WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI----QNRDQIIF---MVGRGYL--M 611 (678)
T ss_pred eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC----CChhheEE---Eeccccc--C
Confidence 2 1122223457789999998754 4789999999999999999999999962 22222211 1111100 0
Q ss_pred ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 1003 IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
.|. ......+..++.+|+..||..++++||.+.+++..|+.+..
T Consensus 612 pd~---s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 612 PDL---SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ccc---hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 111 11123445689999999999999999999999998887754
No 38
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-38 Score=309.55 Aligned_cols=247 Identities=27% Similarity=0.375 Sum_probs=208.7
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|.||.||.|+.+ ++-.||+|++.+.. ...++++.+|+++.+.++||||++++++|.+....|+++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 46899999999999999999865 67899999987543 345678999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||..+|++...|++. ....+++.....++.|+|.|+.|+|. ++|+||||||+|+|++.++..|++|||.+..-.
T Consensus 102 Eya~~gel~k~L~~~--~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEG--RMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EecCCchHHHHHHhc--ccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 999999999999854 34568888899999999999999997 599999999999999999999999999997543
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.......+||..|.|||...+..++..+|+|++|+..||++.|.+||+... ..+..+.+.. .++.++
T Consensus 176 --~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~---~~etYkrI~k-------~~~~~p- 242 (281)
T KOG0580|consen 176 --SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS---HSETYKRIRK-------VDLKFP- 242 (281)
T ss_pred --CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh---hHHHHHHHHH-------ccccCC-
Confidence 333456799999999999999999999999999999999999999997533 1122221111 112222
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.....++.++|.+|+..+|.+|.+..|+++
T Consensus 243 ------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 243 ------STISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred ------cccChhHHHHHHHHhccCccccccHHHHhh
Confidence 233447899999999999999999999987
No 39
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-37 Score=341.20 Aligned_cols=247 Identities=21% Similarity=0.326 Sum_probs=199.4
Q ss_pred cCeEcccCceEEEEEEECCCcEEEEEEecCCchh---hHHHHHHHHHHHHhcCCCceeeeeceEee----CCeEEEEEEe
Q 001561 776 ANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQ---MEREFQAEVEALSRAQHKNLVSLQGYCRH----GNDRLLIYSY 848 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~ 848 (1052)
...||+|++|.||+|.+ +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 46799999999999998 5899999998754322 24667899999999999999999999876 3467899999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++|+|.+++.. ...+++..+..++.+++.|++|||+. .+++||||||+||++++++.+||+|||+++......
T Consensus 104 ~~~g~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~ 177 (283)
T PHA02988 104 CTRGYLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP 177 (283)
T ss_pred CCCCcHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc
Confidence 999999999874 34688999999999999999999973 378899999999999999999999999998654321
Q ss_pred CeeeecccccccccCccccCC--cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQT--LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
....|++.|+|||++.+ ..++.++|||||||++|||++|+.||... +..+....+.. ......
T Consensus 178 ----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~---~~~~~~~~i~~---~~~~~~----- 242 (283)
T PHA02988 178 ----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL---TTKEIYDLIIN---KNNSLK----- 242 (283)
T ss_pred ----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCC---CHHHHHHHHHh---cCCCCC-----
Confidence 23468899999999876 67899999999999999999999999742 22222222111 111000
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
.+...+..+.+++.+||+.||++|||++|+++.|+.++
T Consensus 243 ----~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 243 ----LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred ----CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 11123447899999999999999999999999998875
No 40
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-38 Score=333.48 Aligned_cols=252 Identities=24% Similarity=0.343 Sum_probs=198.2
Q ss_pred HhhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch--------------hhHHHHHHHHHHHHhcCCCceeee
Q 001561 768 KSTNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG--------------QMEREFQAEVEALSRAQHKNLVSL 832 (1052)
Q Consensus 768 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~l 832 (1052)
+..++|++.+.||+|.||.|-+|+.. +++.||||++.+... ...+.+.+|+.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34578999999999999999999865 789999999964320 112468899999999999999999
Q ss_pred eceEeeC--CeEEEEEEeccCCChhhhhhcccCCccc-cCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC
Q 001561 833 QGYCRHG--NDRLLIYSYMENGSLDYWLHESVDKDSV-LKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE 909 (1052)
Q Consensus 833 ~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~ 909 (1052)
+++..++ +..|||+|||..|.+...= ...+ +++.++++|+.+++.||+|||.+ +|+||||||+|+|+++
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p-----~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~ 245 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCP-----PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSS 245 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCC-----CCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcC
Confidence 9999875 5789999999999865432 3344 89999999999999999999997 9999999999999999
Q ss_pred CCCeEEeecccccccCCCCCe----eeecccccccccCccccCCcC----CCcccchHHHHHHHHHHHcCCCCCcccCCC
Q 001561 910 KFEAHLADFGLSRLLRPYDTH----VTTDLVGTLGYIPPEYSQTLT----ATCRGDVYSFGVVLLELLTGRRPVEVCKGK 981 (1052)
Q Consensus 910 ~~~~kl~DfG~a~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslGvil~elltG~~pf~~~~~~ 981 (1052)
+|+|||+|||.+......... .....+|||.|+|||...++. .+.+.||||+||+||+|+.|+.||-. +
T Consensus 246 ~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~---~ 322 (576)
T KOG0585|consen 246 DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD---D 322 (576)
T ss_pred CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc---c
Confidence 999999999999866322111 112358999999999766522 34678999999999999999999953 2
Q ss_pred CchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 982 NCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...++... ++...+..+..++..+.+.++|.+|+.+||++|.+..+|..
T Consensus 323 ~~~~l~~K------------Ivn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 323 FELELFDK------------IVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred hHHHHHHH------------HhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 22222221 12222222333345567899999999999999999999865
No 41
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-39 Score=312.47 Aligned_cols=250 Identities=23% Similarity=0.327 Sum_probs=203.7
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCC--chhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGD--CGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
+.|++.++||+|.|+.||++... +|+.+|+|++... .....+++.+|+++-+.++|||||++.+.+.+....|+|+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 46788889999999999999654 7999999877522 23456778999999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC---CCCCeEEeeccccccc
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD---EKFEAHLADFGLSRLL 924 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~---~~~~~kl~DfG~a~~~ 924 (1052)
+|+|++|..-+-. ....++..+-.++.||++|++|+|.. +|||||+||+|+++- ...-+|++|||+|..+
T Consensus 91 ~m~G~dl~~eIV~----R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 91 LVTGGELFEDIVA----REFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred cccchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 9999998654432 24578899999999999999999986 999999999999995 3445899999999988
Q ss_pred CCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 925 RPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 925 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
. ........+|||+|||||++...+|+..+|||+.|||+|-++.|++||.+ ++..++.+.+....- -++
T Consensus 164 ~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~---~~~~rlye~I~~g~y------d~~ 232 (355)
T KOG0033|consen 164 N--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD---EDQHRLYEQIKAGAY------DYP 232 (355)
T ss_pred C--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC---ccHHHHHHHHhcccc------CCC
Confidence 7 44555678999999999999999999999999999999999999999963 222233333222111 122
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+..|.. ..++..+++++|+..||.+|.|+.|++.
T Consensus 233 ~~~w~~----is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 233 SPEWDT----VTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred CcccCc----CCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 222332 3347889999999999999999999986
No 42
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-38 Score=349.25 Aligned_cols=255 Identities=27% Similarity=0.413 Sum_probs=205.1
Q ss_pred CcccCeEcccCceEEEEEEECC--C--cE-EEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 773 FNQANIIGCGGFGLVYKATLTN--G--TK-AAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~~--g--~~-vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
....++||+|+||.||+|.+.. + .. ||||..+.+. .....+|.+|+++|+.++|||||+++|++......|+
T Consensus 159 v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~i 238 (474)
T KOG0194|consen 159 IELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLML 238 (474)
T ss_pred ccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEE
Confidence 3445889999999999998652 2 23 8999988632 5566789999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
|||+|+||+|.++|+.. ...++..++..++.++|+||+|||+. +++||||.++|+|++.++.+||+|||+++.-
T Consensus 239 vmEl~~gGsL~~~L~k~---~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 239 VMELCNGGSLDDYLKKN---KKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred EEEecCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 99999999999999874 33689999999999999999999985 9999999999999999999999999998764
Q ss_pred CCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccc
Q 001561 925 RPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEII 1003 (1052)
Q Consensus 925 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
..+..... ...-...|+|||.+....++.++|||||||++||+++ |..||.+... .+...++.... .
T Consensus 313 ~~~~~~~~-~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~---~~v~~kI~~~~---~----- 380 (474)
T KOG0194|consen 313 SQYVMKKF-LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN---YEVKAKIVKNG---Y----- 380 (474)
T ss_pred cceeeccc-cccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH---HHHHHHHHhcC---c-----
Confidence 32211110 1123459999999999999999999999999999999 8999975432 23333331111 0
Q ss_pred cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 1004 DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
....+...+..+..++.+|+..+|++||+|.++.++++.+..
T Consensus 381 ----r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 381 ----RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK 422 (474)
T ss_pred ----cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence 011111334468888999999999999999999999988754
No 43
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=7.2e-37 Score=339.01 Aligned_cols=262 Identities=21% Similarity=0.266 Sum_probs=202.0
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
++|++.+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36889999999999999999876 67899999987542 2334567889999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|++++.+..+.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 81 YVEKNMLELLEE----MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred cCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 999987765443 234588999999999999999999986 9999999999999999999999999999876543
Q ss_pred CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhh------------
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKS------------ 995 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~------------ 995 (1052)
.........|++.|+|||++.+..++.++||||+||++|||++|++||..... .+....+.....
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESE---IDQLFTIQKVLGPLPAEQMKLFYS 230 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHhhCCCCHHHHHhhhc
Confidence 33333446789999999999888899999999999999999999999974321 111111111000
Q ss_pred ccccccccccccc------chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 996 EKREVEIIDASIW------HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 996 ~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.........+... .......+..+.+++.+|+++||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000000 0011123457899999999999999999999875
No 44
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.5e-36 Score=335.83 Aligned_cols=255 Identities=24% Similarity=0.339 Sum_probs=202.7
Q ss_pred CcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 773 FNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
|+..+.||+|+||.||+|.. .+|+.||+|.+.... ......+.+|++++++++|++|+++++++.+++..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67788999999999999986 478999999986443 22334578899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++|+|.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~g~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 82 MNGGDLKFHIYNM--GNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred cCCCcHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999998887643 234588999999999999999999986 99999999999999999999999999998754322
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.........+.. ....... .
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~---~~~~~~~-~--------- 221 (285)
T cd05631 157 --TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEV---DRRVKED-Q--------- 221 (285)
T ss_pred --eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHH---HHHhhcc-c---------
Confidence 223457999999999999999999999999999999999999999743221111111 1111000 0
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH--HHhhc
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPF-----IEEVVT--WLDGI 1047 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~--~L~~i 1047 (1052)
..........+.+++.+|++.||++||+ ++|+++ +++++
T Consensus 222 ~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 222 EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 0111123347889999999999999997 788887 55544
No 45
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.8e-36 Score=337.05 Aligned_cols=264 Identities=26% Similarity=0.374 Sum_probs=204.4
Q ss_pred cCCcccCeEcccCceEEEEEEECC-----------------CcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeee
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTN-----------------GTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSL 832 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l 832 (1052)
++|++.+.||+|+||.||+|.+.+ +..||+|.+.... .....++.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578889999999999999997532 3369999987643 3345678999999999999999999
Q ss_pred eceEeeCCeEEEEEEeccCCChhhhhhcccC---------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 001561 833 QGYCRHGNDRLLIYSYMENGSLDYWLHESVD---------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVH 897 (1052)
Q Consensus 833 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H 897 (1052)
++++.+.+..++||||+++|+|.+++..... ....+++..+++++.|++.|++|||+. +|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 9999999999999999999999998865321 123478899999999999999999986 9999
Q ss_pred cCCCCCceEECCCCCeEEeecccccccCCCCCe-eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc--CCCC
Q 001561 898 RDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH-VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT--GRRP 974 (1052)
Q Consensus 898 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--G~~p 974 (1052)
|||||+||++++++.+||+|||+++........ ......++..|+|||++....++.++||||||+++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999875433222 1223456789999999888889999999999999999986 5677
Q ss_pred CcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 975 VEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 975 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
|.... ..+....+............. ..+..++..+.+++.+|++.||++||++.||.+.|++
T Consensus 242 ~~~~~---~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 242 YGELT---DEQVIENAGEFFRDQGRQVYL------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCcCC---HHHHHHHHHHHhhhccccccc------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 75432 222222222211111000000 0011223478999999999999999999999999864
No 46
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-37 Score=355.97 Aligned_cols=257 Identities=23% Similarity=0.318 Sum_probs=214.8
Q ss_pred cCCcccCeEcccCceEEEEEEECCC-cEEEEEEecCCchhhHHHHHHHHHHHHhcC-CCceeeeece-Eee------CCe
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTNG-TKAAVKRLSGDCGQMEREFQAEVEALSRAQ-HKNLVSLQGY-CRH------GND 841 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~g-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~------~~~ 841 (1052)
.++++.++|.+|||+.||.|....+ .+||+|++-.......+.+.+|+++|++++ |+|||.+++. ... .-+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 4577789999999999999987755 999999988777777888999999999996 9999999993 221 235
Q ss_pred EEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccc
Q 001561 842 RLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLS 921 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a 921 (1052)
++|.||||+||.|-+++...... .|++.++++|+.|+++|+++||.. .++|||||||-+|||+..++..||||||.|
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~--~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQT--RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhc--cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 78999999999999999876533 399999999999999999999986 788999999999999999999999999999
Q ss_pred cccCCCC-Ceee-------ecccccccccCcccc---CCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHH
Q 001561 922 RLLRPYD-THVT-------TDLVGTLGYIPPEYS---QTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWV 990 (1052)
Q Consensus 922 ~~~~~~~-~~~~-------~~~~gt~~y~aPE~~---~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~ 990 (1052)
...-... .... -...-|+.|+|||++ .+...++|+|||++||+||-|+....||+..
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s------------ 261 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES------------ 261 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC------------
Confidence 7643322 1100 012568999999964 5778999999999999999999999999732
Q ss_pred HHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 991 FQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
....+++.....+..+.+...+.+||+.||+++|.+||++.||++.+.+++.
T Consensus 262 -------g~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 262 -------GKLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred -------cceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 1234555555555556778899999999999999999999999999887754
No 47
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=324.36 Aligned_cols=262 Identities=25% Similarity=0.361 Sum_probs=202.2
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCC--chhhHHHHHHHHHHHHhcCCCceeeeeceEee-----CCe
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGD--CGQMEREFQAEVEALSRAQHKNLVSLQGYCRH-----GND 841 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~ 841 (1052)
.+.|...+.||+|+||.|+.|..+ +|+.||||++... .....++..+|++.++.++|+||+.+.+.+.. -..
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 456666889999999999999865 7899999998733 34455778899999999999999999998865 357
Q ss_pred EEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccc
Q 001561 842 RLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLS 921 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a 921 (1052)
.|+|+|+| +-+|...++ .+..++.+.+..+++|+++|++|+|+. +|+|||+||+|++++.+..+||+|||+|
T Consensus 101 vYiV~elM-etDL~~iik----~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIK----SQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eEEehhHH-hhHHHHHHH----cCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccce
Confidence 89999999 557887776 355599999999999999999999997 9999999999999999999999999999
Q ss_pred cccCCC-CCeeeecccccccccCcccc-CCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccc
Q 001561 922 RLLRPY-DTHVTTDLVGTLGYIPPEYS-QTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKRE 999 (1052)
Q Consensus 922 ~~~~~~-~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
+..... ....++.++-|..|+|||++ ....|+.+.||||.|||+.||++|++-|.+.. ..+.++.+....+....
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d---~v~Ql~lI~~~lGtP~~ 249 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD---YVHQLQLILELLGTPSE 249 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc---hHHHHHHHHHhcCCCCH
Confidence 987543 22344678899999999965 45689999999999999999999999996421 11111111111111000
Q ss_pred ---------------c--ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1000 ---------------V--EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1000 ---------------~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
. ....+..+....+.....+.+++.+|+..||.+|+|++|+++
T Consensus 250 e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 250 EDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0 000011111111233457889999999999999999999987
No 48
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.7e-37 Score=315.71 Aligned_cols=261 Identities=26% Similarity=0.301 Sum_probs=206.8
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchh--hHHHHHHHHHHHHhcCCCceeeeeceEee--CCeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQ--MEREFQAEVEALSRAQHKNLVSLQGYCRH--GNDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv 845 (1052)
++|+..+.|++|+||.||+|+.+ +++.||+|+++.+... ..-.-.+|+.++.+++|||||.+-++... -+..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 45788899999999999999865 7889999999754321 11234789999999999999999998764 3679999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
||||+. +|...++.. .+++...++..++.|+++|++|||.. .|+|||+|++|+|+...|.+||+|||+|+.++
T Consensus 156 Me~~Eh-DLksl~d~m---~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred HHHHHh-hHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 999987 788888753 46789999999999999999999996 99999999999999999999999999999987
Q ss_pred CCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccc-
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEII- 1003 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1003 (1052)
.. ....+..+-|..|+|||.+.+ ..|++++|+||+|||+.||+++++-|.+ ....+.+..++..........+.
T Consensus 229 sp-~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G---~sE~dQl~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 229 SP-LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPG---KSEIDQLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred CC-cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCC---CchHHHHHHHHHHhCCCccccCCC
Confidence 64 334556788999999997654 6799999999999999999999999863 44455666666655433222111
Q ss_pred --ccccc--------------chhhHH-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1004 --DASIW--------------HKDREK-QLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1004 --~~~~~--------------~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
....+ ..+... ..+.-.+++..++..||++|.|+.|.++
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 11111 001111 2356789999999999999999999986
No 49
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=7.3e-37 Score=334.76 Aligned_cols=255 Identities=23% Similarity=0.399 Sum_probs=204.1
Q ss_pred cCCcccCeEcccCceEEEEEEEC----CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT----NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
++|++.+.||+|+||.||+|.+. .+..||+|.++... ......+.+|+.++++++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46888999999999999999753 35689999988653 33346789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+++|+|.+++... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.++++|||.+....
T Consensus 85 ~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 85 TEYMSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEeCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999998753 34689999999999999999999986 99999999999999999999999999876543
Q ss_pred CCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
...........++..|+|||.+.+..++.++||||||+++||+++ |+.||.... ..+....+. .... .
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~---~~~~~~~~~----~~~~--~-- 227 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS---GQDVIKAVE----DGFR--L-- 227 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC---HHHHHHHHH----CCCC--C--
Confidence 221111122345678999999988899999999999999999775 999996432 222222211 1100 0
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
..+...+..+.+++.+|++.+|++||+++|+.+.|+++
T Consensus 228 -----~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 -----PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 01112344688999999999999999999999998764
No 50
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.1e-37 Score=322.03 Aligned_cols=245 Identities=24% Similarity=0.376 Sum_probs=205.2
Q ss_pred cCCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCchhhHH---HHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDCGQMER---EFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
.+|++.+.||+|.||+|-+|.. ..|+.||||.++++..+.+. .+.+|+++|+.++||||++++++|+..+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 4688888999999999999974 68999999999877654443 4689999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||..+|.|.+|+.+ .+.+++.++++++.||+.|+.|+|.+ +++|||+|.+|||+|+++.+||+|||++-.+..
T Consensus 133 EYaS~GeLYDYiSe----r~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 133 EYASGGELYDYISE----RGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EecCCccHHHHHHH----hccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 99999999999985 55699999999999999999999997 999999999999999999999999999987753
Q ss_pred CCCeeeecccccccccCccccCCcCCC-cccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTAT-CRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
.....+++|+|-|.+||++.+.+|. +.+|-||+||++|.++.|..||++. ....++. +.. .+.. ..+
T Consensus 206 --~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~---Dhk~lvr---QIs-~GaY---rEP 273 (668)
T KOG0611|consen 206 --KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR---DHKRLVR---QIS-RGAY---REP 273 (668)
T ss_pred --ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc---hHHHHHH---Hhh-cccc---cCC
Confidence 3345678999999999999998885 6899999999999999999999742 1112222 111 1111 111
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
. .+..+.-+|++|+..+|++|.|+.+|..
T Consensus 274 ~--------~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 274 E--------TPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred C--------CCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 1 1114567999999999999999999875
No 51
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=324.80 Aligned_cols=259 Identities=31% Similarity=0.451 Sum_probs=197.6
Q ss_pred CcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHh--cCCCceeeeeceEeeCC----eEEEEE
Q 001561 773 FNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSR--AQHKNLVSLQGYCRHGN----DRLLIY 846 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~lv~ 846 (1052)
.+..++||+|.||.||||.+. ++.||||++.. +....|+.|-++++. ++|+||++++++-...+ +++||+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt 287 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT 287 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence 445678999999999999987 69999999973 344567777777665 58999999999876655 789999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcC------CCCeEEcCCCCCceEECCCCCeEEeeccc
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVC------EPHIVHRDVKSSNILLDEKFEAHLADFGL 920 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~i~HrDlkp~Nill~~~~~~kl~DfG~ 920 (1052)
||.+.|+|.+||.. ..++|....+|+..+++||+|||+.. .++|+|||||++|||+..|+++.|+|||+
T Consensus 288 ~fh~kGsL~dyL~~-----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 288 EFHPKGSLCDYLKA-----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred eeccCCcHHHHHHh-----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 99999999999964 45899999999999999999999753 56899999999999999999999999999
Q ss_pred ccccCCCCCe-eeecccccccccCccccCCcCC------CcccchHHHHHHHHHHHcCCCCC------------ccc--C
Q 001561 921 SRLLRPYDTH-VTTDLVGTLGYIPPEYSQTLTA------TCRGDVYSFGVVLLELLTGRRPV------------EVC--K 979 (1052)
Q Consensus 921 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~------~~~~DvwslGvil~elltG~~pf------------~~~--~ 979 (1052)
|..+.+.... .....+||.+|||||++.+... -.+.||||+|.++|||++...-+ +.. .
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 9998754332 2234699999999999876422 23689999999999999854332 211 1
Q ss_pred CCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 980 GKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
.+..++....+.+.+... .+.+..... ..+.-+.+.+..||+.||+.|-|+.=|-+.+.++
T Consensus 443 hPt~e~mq~~VV~kK~RP---~~p~~W~~h----~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l 503 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRP---KIPDAWRKH----AGMAVLCETIEECWDHDAEARLTAGCVEERMAEL 503 (534)
T ss_pred CCCHHHHHHHHHhhccCC---CChhhhhcC----ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHH
Confidence 122223333333322221 222221111 2344678999999999999999999888877665
No 52
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=7e-37 Score=351.03 Aligned_cols=260 Identities=27% Similarity=0.407 Sum_probs=204.2
Q ss_pred hcCCcccCeEcccCceEEEEEEE------CCCcEEEEEEecCCc-hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCe
Q 001561 770 TNNFNQANIIGCGGFGLVYKATL------TNGTKAAVKRLSGDC-GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGND 841 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 841 (1052)
.++|++.+.||+|+||.||+|.+ .++..||||+++... ....+.+.+|+++++.+ +||||++++++|.+++.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 34688899999999999999964 235689999987543 33445688999999999 89999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcccC----------------------------------------------------------
Q 001561 842 RLLIYSYMENGSLDYWLHESVD---------------------------------------------------------- 863 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------------------- 863 (1052)
.++||||+++|+|.++++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999999865321
Q ss_pred -------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 864 -------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 864 -------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
....+++..+..++.|+++|++|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 122578899999999999999999986 9999999999999999999999999999876433221
Q ss_pred e-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 931 V-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 931 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
. .....++..|+|||++.+..++.++|||||||++|||++ |..||..... .......+..... .. .+
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~--~~~~~~~~~~~~~----~~--~~--- 339 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV--DSKFYKMIKEGYR----ML--SP--- 339 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc--hHHHHHHHHhCcc----CC--CC---
Confidence 1 122345668999999999999999999999999999998 8999864321 1122222111100 00 00
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
.....++.+++.+|++.||++||+++|+++.|++.
T Consensus 340 ----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 ----ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ----CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 11123688999999999999999999999999863
No 53
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=7.3e-37 Score=350.50 Aligned_cols=261 Identities=27% Similarity=0.425 Sum_probs=204.3
Q ss_pred hcCCcccCeEcccCceEEEEEEEC------CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCe
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT------NGTKAAVKRLSGDC-GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGND 841 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 841 (1052)
.++|++.+.||+|+||.||+|++. ++..||+|+++... ......+.+|+++++.+ +|+|||+++++|.+...
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 346889999999999999999742 23579999997543 33345688999999999 89999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcccC----------------------------------------------------------
Q 001561 842 RLLIYSYMENGSLDYWLHESVD---------------------------------------------------------- 863 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------------------- 863 (1052)
.++||||+++|+|.++++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999999999999998864210
Q ss_pred --------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee-eec
Q 001561 864 --------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV-TTD 934 (1052)
Q Consensus 864 --------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~-~~~ 934 (1052)
...++++.++++++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++......... ...
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 113478899999999999999999986 99999999999999999999999999998754332211 122
Q ss_pred ccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhH
Q 001561 935 LVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDRE 1013 (1052)
Q Consensus 935 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1052)
..+++.|+|||++....++.++|||||||++|||++ |+.||...... ..... ......... .+ .
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~--~~~~~----~~~~~~~~~--~~-------~ 338 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN--SKFYK----MVKRGYQMS--RP-------D 338 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc--HHHHH----HHHcccCcc--CC-------C
Confidence 345668999999988899999999999999999997 99999643211 11111 111110000 00 0
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 1014 KQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 1014 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
..+.++.+++.+|++.||++||++.+++++|+++-
T Consensus 339 ~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 339 FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 11347899999999999999999999999998863
No 54
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-37 Score=324.13 Aligned_cols=258 Identities=25% Similarity=0.367 Sum_probs=200.3
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCC---e--EEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGN---D--RLLI 845 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---~--~~lv 845 (1052)
.|+..+++|.|+||.||+|... +++.||||+.-.+.. .-.+|+++|++++|||||++..+|.... + ..+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4666889999999999999865 578999999865533 2357999999999999999999886532 2 2489
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCC-CCeEEeeccccccc
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEK-FEAHLADFGLSRLL 924 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~-~~~kl~DfG~a~~~ 924 (1052)
||||+. +|.+.++.....+..++.-.+.-++.|+++|++|||+. +|+||||||+|+|+|.+ |.+||||||.|+.+
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999976 89998887666677788888999999999999999996 99999999999999965 99999999999998
Q ss_pred CCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccc-
Q 001561 925 RPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI- 1002 (1052)
Q Consensus 925 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1002 (1052)
.+.+... .+.-|..|+|||.+.+ ..|+.+.||||.||++.||+-|++-|.+. +..+....+....+.....++
T Consensus 177 ~~~epni--SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~---s~~dQL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 177 VKGEPNI--SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD---SSVDQLVEIIKVLGTPTREDIK 251 (364)
T ss_pred ccCCCce--eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC---CHHHHHHHHHHHhCCCCHHHHh
Confidence 7665543 3567889999997655 57999999999999999999999999753 222322222222211111111
Q ss_pred -------------ccccccch-hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1003 -------------IDASIWHK-DREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1003 -------------~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+.+..+.. .......+..+++.++++.+|.+|.++.|++.
T Consensus 252 ~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 252 SMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred hcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 11111111 23344557899999999999999999999986
No 55
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3e-36 Score=329.02 Aligned_cols=256 Identities=25% Similarity=0.405 Sum_probs=208.2
Q ss_pred hcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.++|++.+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+||+++++++.+++..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 356889999999999999999988888999998875432 3467899999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++|+|.++++.. ....+++..++.++.|+++|++|||+. +++||||||+||++++++.++++|||.++.......
T Consensus 84 ~~~~L~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 84 AKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 158 (261)
T ss_pred CCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence 999999998753 344678899999999999999999986 999999999999999999999999999987653322
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.......++..|+|||+.....++.++||||||+++|||++ |+.||... ...+...++.... ..
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~---~~~~~~~~~~~~~----~~-------- 223 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGM---SNSDVMSALQRGY----RM-------- 223 (261)
T ss_pred eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCC---CHHHHHHHHHcCC----CC--------
Confidence 22223346678999999988889999999999999999998 99999632 1222222221110 00
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
+.....+.++.+++.+|++.+|++||+++++.++|+++
T Consensus 224 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 224 -PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred -CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 00111234688999999999999999999999999864
No 56
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.3e-36 Score=341.58 Aligned_cols=198 Identities=30% Similarity=0.462 Sum_probs=175.1
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
++|++.+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 57999999999999999999876 68899999987543 33456789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++|+|.+++.. ...+++..+..++.|++.|++|||+. .+|+||||||+||+++.++.+||+|||++......
T Consensus 85 ~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 157 (331)
T cd06649 85 MDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 157 (331)
T ss_pred CCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCccccccccc-
Confidence 999999999874 34588999999999999999999974 36999999999999999999999999999765332
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEV 977 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~ 977 (1052)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred --ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 22345799999999999988999999999999999999999999963
No 57
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.7e-36 Score=327.27 Aligned_cols=252 Identities=24% Similarity=0.443 Sum_probs=204.0
Q ss_pred cCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEecc
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
++|++.+.||+|+||.||+|.+.++..+|+|.+.... ...+++..|++++++++||||+++++++.+++..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 4588889999999999999998888899999876442 334678899999999999999999999999999999999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+|+|.++++.. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|||.++........
T Consensus 83 ~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05114 83 NGCLLNYLRQR---QGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156 (256)
T ss_pred CCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence 99999988753 23588999999999999999999986 9999999999999999999999999999865432222
Q ss_pred eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 931 VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......++..|+|||++.+..++.++||||||+++|||++ |+.||... ...+....+.... . ...+.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~---~~~~~~~~i~~~~---~---~~~~~--- 224 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKK---SNYEVVEMISRGF---R---LYRPK--- 224 (256)
T ss_pred ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCC---CHHHHHHHHHCCC---C---CCCCC---
Confidence 2223345668999999988889999999999999999999 99998632 2222222221110 0 00111
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
....++.+++.+|++.+|++||+++|+++.|.
T Consensus 225 ----~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 225 ----LASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ----CCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 12246899999999999999999999999873
No 58
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.3e-36 Score=344.15 Aligned_cols=252 Identities=24% Similarity=0.323 Sum_probs=203.7
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46889999999999999999876 68899999987542 223456788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 81 EYVPGGDFRTLLNN----LGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 99999999999864 34688999999999999999999986 999999999999999999999999999986543
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+...... ....
T Consensus 154 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~---~~~~~~~i~~~~~~------~~~~ 220 (333)
T cd05600 154 ----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST---PNETWENLKYWKET------LQRP 220 (333)
T ss_pred ----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC---HHHHHHHHHhcccc------ccCC
Confidence 2234579999999999998899999999999999999999999996422 22222211111100 0000
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...........++.+++.+|+..+|.+||++.|+++
T Consensus 221 ~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 221 VYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred CCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 001001123457889999999999999999999986
No 59
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.4e-36 Score=336.45 Aligned_cols=261 Identities=22% Similarity=0.329 Sum_probs=199.5
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
++|++.+.||+|+||+||+|... ++..||+|+++... ......+.+|++++++++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46899999999999999999865 68899999987443 22344678899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 85 ~~~-~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 85 LDS-DLKQYLDNC---GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred CCc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 975 888887642 34578899999999999999999986 99999999999999999999999999997643222
Q ss_pred CeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccc---ccc--
Q 001561 929 THVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKRE---VEI-- 1002 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~-- 1002 (1052)
.......|++.|+|||++.+ ..++.++||||+||++|||++|++||... +..+....+......... ..+
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07871 158 -KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGS---TVKEELHLIFRLLGTPTEETWPGITS 233 (288)
T ss_pred -ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHHHHhCCCChHHhhcccc
Confidence 12234578999999998764 56899999999999999999999999642 222222222221111000 000
Q ss_pred -------ccccccc----hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1003 -------IDASIWH----KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1003 -------~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..+.... ........++.+++.+|++.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 234 NEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred chhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 001112346789999999999999999999975
No 60
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.6e-36 Score=336.56 Aligned_cols=244 Identities=25% Similarity=0.296 Sum_probs=200.4
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999876 68999999986432 223456789999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 81 EYVPGGELFSYLRN----SGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 99999999999874 34688999999999999999999986 999999999999999999999999999987543
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+..+.+.. .. ..
T Consensus 154 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~---~~~~~~~~i~~---~~--~~----- 216 (291)
T cd05612 154 R----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD---NPFGIYEKILA---GK--LE----- 216 (291)
T ss_pred C----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHHh---CC--cC-----
Confidence 2 22357999999999999888999999999999999999999999642 22222221111 10 00
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPF-----IEEVVT 1042 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1042 (1052)
.+......+.+++.+|++.||.+||+ ++|+++
T Consensus 217 ----~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 217 ----FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred ----CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 01112346889999999999999995 888876
No 61
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-37 Score=306.87 Aligned_cols=257 Identities=25% Similarity=0.392 Sum_probs=204.7
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--------hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCC
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--------GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGN 840 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 840 (1052)
.+|.-.+++|+|..++|.++.++ +|..+|+|++.... .+..++-.+|+++++++ .||+|+++.++|+.+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 45677788999999999998755 78899999886322 12223456799999998 6999999999999999
Q ss_pred eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccc
Q 001561 841 DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGL 920 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~ 920 (1052)
..++|+|.|+.|.|.+++.. ...+++.+.++|+.|+.+|++|||.. .|||||+||+|||+|++.++||+|||+
T Consensus 97 F~FlVFdl~prGELFDyLts----~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTS----KVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred hhhhhhhhcccchHHHHhhh----heeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccce
Confidence 99999999999999999974 45689999999999999999999986 999999999999999999999999999
Q ss_pred ccccCCCCCeeeecccccccccCccccC------CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhh
Q 001561 921 SRLLRPYDTHVTTDLVGTLGYIPPEYSQ------TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMK 994 (1052)
Q Consensus 921 a~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~ 994 (1052)
|..+.+. ......+|||+|+|||.+. ...|+..+|+|+.|||+|.++.|.+||.... . . .+.++.
T Consensus 170 a~~l~~G--ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk-----Q-m-lMLR~I 240 (411)
T KOG0599|consen 170 ACQLEPG--EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK-----Q-M-LMLRMI 240 (411)
T ss_pred eeccCCc--hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH-----H-H-HHHHHH
Confidence 9988654 3345679999999999754 3567889999999999999999999995311 0 0 011111
Q ss_pred hcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcCc
Q 001561 995 SEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIGI 1049 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~~ 1049 (1052)
..+. .+ + ..+...+.+....++|.+|++.||.+|.|++|+++ ++..+..
T Consensus 241 meGk-yq-F----~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~ 291 (411)
T KOG0599|consen 241 MEGK-YQ-F----RSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQ 291 (411)
T ss_pred Hhcc-cc-c----CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHH
Confidence 1111 01 1 11222344557899999999999999999999987 5554443
No 62
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.9e-36 Score=353.65 Aligned_cols=252 Identities=21% Similarity=0.258 Sum_probs=206.1
Q ss_pred CCcccCeEcccCceEEEEEEEC-C-CcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-N-GTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.|.+.+.||+|++|.||+|... + +..||+|.+..........+.+|++++++++|||||++++++.+++..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888999999999999999754 4 6788888876555555567888999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++|+|.++++.......++++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 99999998876554556789999999999999999999986 999999999999999999999999999987653322
Q ss_pred -eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 930 -HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 930 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+....... ... .
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~---~~~~~~~~~~~---~~~-~-------- 289 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP---SQREIMQQVLY---GKY-D-------- 289 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHHh---CCC-C--------
Confidence 1233457999999999999999999999999999999999999999632 22222222111 100 0
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..+.....++.+++.+|++.+|++||++.++++
T Consensus 290 -~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 -PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 001112346899999999999999999999875
No 63
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.7e-36 Score=328.29 Aligned_cols=256 Identities=26% Similarity=0.401 Sum_probs=207.0
Q ss_pred hcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.++|++.+.||+|++|.||+|...+++.||+|.++... ...+++.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 45688899999999999999998778889999987543 23567899999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++.... +..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 84 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 84 KYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred cCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 9999999987532 45689999999999999999999986 999999999999999999999999999987653222
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
........+..|+|||+..+..++.++||||||+++|||++ |+.||.... .......+. . ....
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~---~~~~~~~~~---~-~~~~-------- 223 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT---NAEVLQQVD---Q-GYRM-------- 223 (261)
T ss_pred cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC---HHHHHHHHH---c-CCCC--------
Confidence 11112223458999999998899999999999999999999 999986321 112221111 1 1000
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
.........+.+++.+|++.+|++||++.++++.|++.
T Consensus 224 -~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 224 -PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred -CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 01112234789999999999999999999999999863
No 64
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.8e-36 Score=317.88 Aligned_cols=269 Identities=25% Similarity=0.345 Sum_probs=208.6
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch--hhHHHHHHHHHHHHhcCCCc-eeeeeceEeeCC------
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG--QMEREFQAEVEALSRAQHKN-LVSLQGYCRHGN------ 840 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~------ 840 (1052)
..|+..+.||+|+||+||+|+.. +|+.||+|++.-+.. .......+|+.++++++|+| ||++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 34666778999999999999854 789999999875533 23345689999999999999 999999998877
Q ss_pred eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccc
Q 001561 841 DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGL 920 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~ 920 (1052)
..++||||++. +|..++.........++...+..++.|+++|++|||++ +|+||||||+||+++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence 78999999965 89999887553334577789999999999999999997 999999999999999999999999999
Q ss_pred ccccCCCCCeeeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccc
Q 001561 921 SRLLRPYDTHVTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKRE 999 (1052)
Q Consensus 921 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
|+.+.-. ....+..++|..|+|||++.+. .|+...||||+|||++||+++++-|.+. ...+....++...+....
T Consensus 167 Ara~~ip-~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~---se~~ql~~If~~lGtP~e 242 (323)
T KOG0594|consen 167 ARAFSIP-MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGD---SEIDQLFRIFRLLGTPNE 242 (323)
T ss_pred HHHhcCC-cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCC---cHHHHHHHHHHHcCCCCc
Confidence 9976532 2224556889999999987765 7899999999999999999999998643 334455555555443221
Q ss_pred cccc------ccc-ccchh------hH---HHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hhhc
Q 001561 1000 VEII------DAS-IWHKD------RE---KQLLEMLEIACKCIDQDPRRRPFIEEVVTW--LDGI 1047 (1052)
Q Consensus 1000 ~~~~------~~~-~~~~~------~~---~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i 1047 (1052)
.... +-. ..... .. .......+++.+|++.+|++|.+++.+++. +..+
T Consensus 243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 1111 111 00000 11 111367899999999999999999999883 5444
No 65
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.7e-36 Score=328.75 Aligned_cols=255 Identities=25% Similarity=0.389 Sum_probs=205.9
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.+|++.+.||+|+||.||+|.+. +++.||+|++..+. ...+++.+|++++++++||||+++++++..++..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 35778899999999999999865 58899999987543 33467889999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++... ....+++..++.++.|+++|++|||+. +++||||||+||++++++.+||+|||.+........
T Consensus 85 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 85 TYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred CCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 999999998653 234589999999999999999999986 999999999999999999999999999987653322
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.......+++.|+|||...+..++.++||||||+++|||++ |..||... ...+...... .....
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~---~~~~~~~~~~----~~~~~-------- 224 (263)
T cd05052 160 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYELLE----KGYRM-------- 224 (263)
T ss_pred eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---CHHHHHHHHH----CCCCC--------
Confidence 22222234668999999988899999999999999999998 99998632 2222221111 11000
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
..+...+.++.+++.+|++.+|++||++.|++++|+++
T Consensus 225 -~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 -ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11112234789999999999999999999999999875
No 66
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.8e-36 Score=330.86 Aligned_cols=257 Identities=30% Similarity=0.475 Sum_probs=211.8
Q ss_pred hhcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
...+|++.+.||.|+||.||+|...++..+|+|.+.........++.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 34568889999999999999999888999999999876665567789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++++|.++++.. ....+++..++.++.|++.|++|||+. +|+||||||+||++++++.+|++|||.+.......
T Consensus 84 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 84 MEKGSLLAFLRSP--EGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred cccCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 9999999999764 245689999999999999999999986 99999999999999999999999999998764322
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASI 1007 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
. ......++..|+|||......++.++||||||+++|+|++ |+.||.... ..+......... . .
T Consensus 159 ~-~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~---~~~~~~~~~~~~--~----~----- 223 (261)
T cd05148 159 Y-LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN---NHEVYDQITAGY--R----M----- 223 (261)
T ss_pred c-cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC---HHHHHHHHHhCC--c----C-----
Confidence 1 1223346778999999988889999999999999999998 899996432 222222221100 0 0
Q ss_pred cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1008 WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
......+..+.+++.+|++.+|.+||+++++++.|+++
T Consensus 224 --~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 224 --PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 01112234688999999999999999999999999874
No 67
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.7e-36 Score=339.69 Aligned_cols=241 Identities=23% Similarity=0.326 Sum_probs=195.8
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENG 852 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 852 (1052)
++||+|+||.||+|... +|+.||+|+++... ......+.+|++++++++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 78999999987542 223345778999999999999999999999999999999999999
Q ss_pred ChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeee
Q 001561 853 SLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVT 932 (1052)
Q Consensus 853 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 932 (1052)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~ 152 (323)
T cd05571 81 ELFFHLSR----ERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GATM 152 (323)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCcc
Confidence 99988864 34689999999999999999999986 9999999999999999999999999999764322 1223
Q ss_pred ecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhh
Q 001561 933 TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDR 1012 (1052)
Q Consensus 933 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1052)
...+||+.|+|||++.+..++.++||||+||++|||++|+.||... +.......+.. .. .. .+
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~---~~~~~~~~~~~---~~--~~---------~p 215 (323)
T cd05571 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---DHEKLFELILM---EE--IR---------FP 215 (323)
T ss_pred cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCC---CHHHHHHHHHc---CC--CC---------CC
Confidence 3457999999999999999999999999999999999999999632 21122211111 00 00 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001561 1013 EKQLLEMLEIACKCIDQDPRRRP-----FIEEVVT 1042 (1052)
Q Consensus 1013 ~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1042 (1052)
.....++.+++.+|++.||++|| ++.|+++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 12234688999999999999999 7888875
No 68
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4e-36 Score=339.07 Aligned_cols=244 Identities=22% Similarity=0.289 Sum_probs=199.3
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46888999999999999999876 68899999987432 123356889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 98 EFVVGGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred cCCCCChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999998874 34578899999999999999999986 999999999999999999999999999987643
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||... ........+. ... ..+ +
T Consensus 171 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~---~~~~~~~~i~---~~~--~~~--p- 235 (329)
T PTZ00263 171 R----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD---TPFRIYEKIL---AGR--LKF--P- 235 (329)
T ss_pred C----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC---CHHHHHHHHh---cCC--cCC--C-
Confidence 2 12357999999999999989999999999999999999999999632 1111111111 110 000 0
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPF-----IEEVVT 1042 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1042 (1052)
.....++.+++.+|++.||++||+ +++++.
T Consensus 236 ------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 236 ------NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 112236789999999999999997 677764
No 69
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=333.86 Aligned_cols=251 Identities=23% Similarity=0.367 Sum_probs=213.3
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCe-EEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGND-RLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 846 (1052)
++|...+++|+|+||.++.++++ ++..+|+|.+.... ....+....|+.++++++|||||.+.+.|.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 56888999999999999999866 67899999887543 3334467899999999999999999999999888 89999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
+|++||++.+.+.+.. +..++++.+..|+.|++.|+.|||+. +|+|||||++||+++.++.||++|||+|+.+.+
T Consensus 84 ~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred eecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 9999999999998753 67799999999999999999999975 999999999999999999999999999999876
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.. .....++|||.||.||++.+.+|..|+||||+||++|||++-+++|.. .+...++..+....
T Consensus 159 ~~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a---~~m~~Li~ki~~~~------------ 222 (426)
T KOG0589|consen 159 ED-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKA---SNMSELILKINRGL------------ 222 (426)
T ss_pred ch-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCc---cchHHHHHHHhhcc------------
Confidence 54 234557999999999999999999999999999999999999999963 23333333332222
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTW 1043 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1043 (1052)
..+.+..++.++..++..|++.+|+.||++.+++..
T Consensus 223 -~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 -YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 122334455689999999999999999999999874
No 70
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-36 Score=317.69 Aligned_cols=266 Identities=27% Similarity=0.370 Sum_probs=205.2
Q ss_pred hhcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhc--CCCceeeeeceEeeC----CeE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRA--QHKNLVSLQGYCRHG----NDR 842 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----~~~ 842 (1052)
..++..+.+.||+|.||.||+|+|+ |+.||||++.. ..++.+.+|.++++.. +|+||+.+++.-..+ .+.
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred hhheeEEEEEecCccccceeecccc-CCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 3467888999999999999999998 99999999974 3456788888888765 999999999986544 367
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEEcCCCCCceEECCCCCeEEee
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKV-----CEPHIVHRDVKSSNILLDEKFEAHLAD 917 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~i~HrDlkp~Nill~~~~~~kl~D 917 (1052)
|+|++|.+.|+|.|||.+ ..++.+..++++..+|.||+|||-. ..|.|+|||||+.|||+.+++.+.|+|
T Consensus 285 wLvTdYHe~GSL~DyL~r-----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNR-----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEeeecccCCcHHHHHhh-----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 999999999999999974 4688999999999999999999964 367899999999999999999999999
Q ss_pred cccccccCCCCCee---eecccccccccCccccCCc------CCCcccchHHHHHHHHHHHcC----------CCCCccc
Q 001561 918 FGLSRLLRPYDTHV---TTDLVGTLGYIPPEYSQTL------TATCRGDVYSFGVVLLELLTG----------RRPVEVC 978 (1052)
Q Consensus 918 fG~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslGvil~elltG----------~~pf~~~ 978 (1052)
+|+|.......... ....+||.+|||||++... ..-..+||||||.|+||+.-. ++||...
T Consensus 360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 99998876553322 2346999999999987543 223479999999999998862 4677654
Q ss_pred CCCC-chhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 979 KGKN-CRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 979 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
.+.. ..+....+.-..+.++ . -+..| ...+.+..+.++|+.||..+|..|-|+-.+-+.|.++..
T Consensus 440 Vp~DPs~eeMrkVVCv~~~RP---~-ipnrW--~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 440 VPSDPSFEEMRKVVCVQKLRP---N-IPNRW--KSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCCHHHHhcceeecccCC---C-CCccc--ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 3221 1111111111111111 0 11111 233567789999999999999999999999998887763
No 71
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=5.6e-36 Score=332.43 Aligned_cols=262 Identities=28% Similarity=0.470 Sum_probs=210.6
Q ss_pred cCCcccCeEcccCceEEEEEEEC------CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT------NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
++|.+.+.||+|+||.||+|... ++..+|+|.+........+.+.+|++++++++||||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45888899999999999999743 345689999887666666789999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcccC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCC
Q 001561 845 IYSYMENGSLDYWLHESVD------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFE 912 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~ 912 (1052)
||||+++++|.+++..... ....+++..++.++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 9999999999999975321 224589999999999999999999986 9999999999999999999
Q ss_pred eEEeecccccccCCCCCe-eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHH
Q 001561 913 AHLADFGLSRLLRPYDTH-VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWV 990 (1052)
Q Consensus 913 ~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~ 990 (1052)
++|+|||++......... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ..+..+.+
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~---~~~~~~~~ 238 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS---NTEVIECI 238 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHH
Confidence 999999999765432211 1223456789999999998899999999999999999999 999986422 11222211
Q ss_pred HHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCccc
Q 001561 991 FQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGIDA 1051 (1052)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1051 (1052)
. ...... .....+..+.+++.+|++.+|++||++.+|+++|+++....
T Consensus 239 ~----~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 239 T----QGRVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred h----CCCCCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 1 111110 01112346889999999999999999999999999986543
No 72
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.1e-35 Score=323.57 Aligned_cols=261 Identities=22% Similarity=0.311 Sum_probs=210.2
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCC---chhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGD---CGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||.||+|+.. +++.||+|.+... .......+.+|++++++++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 47889999999999999999865 7899999987532 2334456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++.........+++..+..++.|+++|++|||+. +++||||||+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999998875544455688999999999999999999986 999999999999999999999999999987643
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
... ......|++.|+|||...+..++.++||||||+++|||++|+.||.... .+..+.. ....... ...
T Consensus 159 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~-~~~~~~~---~~~~~~~-~~~----- 227 (267)
T cd08228 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-MNLFSLC---QKIEQCD-YPP----- 227 (267)
T ss_pred hhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc-ccHHHHH---HHHhcCC-CCC-----
Confidence 221 1223468889999999988889999999999999999999999985321 1111111 1111100 000
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
.........+.+++.+|++.+|++||++.+|++.|++++
T Consensus 228 ---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 228 ---LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ---CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 011223457899999999999999999999999999875
No 73
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=4.9e-36 Score=340.70 Aligned_cols=267 Identities=22% Similarity=0.325 Sum_probs=199.2
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC-----CeEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG-----NDRL 843 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 843 (1052)
+|++.+.||+|+||.||+|+.. ++..||+|++.... .....++.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4888999999999999999865 78999999987432 23345688999999999999999999988543 2479
Q ss_pred EEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccc
Q 001561 844 LIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRL 923 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~ 923 (1052)
+||||++ ++|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 81 VVFELME-SDLHQVIKA----NDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEecCC-CCHHHHHHh----cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 9999995 688887764 34589999999999999999999996 999999999999999999999999999986
Q ss_pred cCCCCC--eeeecccccccccCccccCC--cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccc
Q 001561 924 LRPYDT--HVTTDLVGTLGYIPPEYSQT--LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKRE 999 (1052)
Q Consensus 924 ~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|++||.... .......+.........
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~---~~~~~~~~~~~~~~~~~ 229 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN---VVHQLDLITDLLGTPSP 229 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCC---hHHHHHHHHHHhCCCCH
Confidence 432211 12234579999999998765 678999999999999999999999996422 11111111111100000
Q ss_pred -----------ccc---cccccc---chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcCc
Q 001561 1000 -----------VEI---IDASIW---HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIGI 1049 (1052)
Q Consensus 1000 -----------~~~---~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~~ 1049 (1052)
... ...... ..........+.+++.+|++.||++||+++|+++ +++++..
T Consensus 230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 230 ETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 000 000000 0000112346789999999999999999999997 6665543
No 74
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6.6e-36 Score=330.58 Aligned_cols=258 Identities=29% Similarity=0.487 Sum_probs=206.9
Q ss_pred cCCcccCeEcccCceEEEEEEECC-C-----cEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTN-G-----TKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRL 843 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~-g-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 843 (1052)
++|++.+.||+|+||.||+|.... + ..||+|.+.... .....++.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 368889999999999999997642 2 579999887543 334567899999999999999999999999989999
Q ss_pred EEEEeccCCChhhhhhcccCC------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCC
Q 001561 844 LIYSYMENGSLDYWLHESVDK------------DSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKF 911 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~ 911 (1052)
++|||+++|+|.+++...... ...+++.+++.++.|++.|++|||+. +++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 999999999999998754211 14588999999999999999999986 999999999999999999
Q ss_pred CeEEeecccccccCCCCC-eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHH
Q 001561 912 EAHLADFGLSRLLRPYDT-HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSW 989 (1052)
Q Consensus 912 ~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~ 989 (1052)
.++|+|||+++....... .......+++.|+|||.+....++.++|||||||++|||++ |..||.... ..+....
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~---~~~~~~~ 238 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS---NQEVIEM 238 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHH
Confidence 999999999986543222 12233467889999999888889999999999999999998 999986432 2222222
Q ss_pred HHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 990 VFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
+. ..... ..+...+.++.+++.+|++.+|++||+++|+++.|+++
T Consensus 239 i~----~~~~~---------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 239 IR----SRQLL---------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HH----cCCcC---------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11 11110 11223345799999999999999999999999999763
No 75
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-37 Score=331.16 Aligned_cols=264 Identities=27% Similarity=0.392 Sum_probs=214.4
Q ss_pred cCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhH-HHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQME-REFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
....+.+.||+|.||.|..+....+.+||||.++.+..... ++|.+|+++|.+++|||||+++|+|..++..++|+|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 34667889999999999999988789999999998765544 88999999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++|+|..|+..+.... +.-+...+|+.|||.|++||.+. ++||||+.++|+|+|.++++||+|||+++-+-..+.
T Consensus 618 EnGDLnqFl~aheapt--~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPT--AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred hcCcHHHHHHhccCcc--cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCc
Confidence 9999999998764322 34456678999999999999997 999999999999999999999999999996544433
Q ss_pred e-eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc--CCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 930 H-VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT--GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 930 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
+ .....+-..+|||||.+.-++++.++|||+|||++||+++ ...||+...++ +.++..-...+.... .
T Consensus 693 y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e---~vven~~~~~~~~~~------~ 763 (807)
T KOG1094|consen 693 YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE---QVVENAGEFFRDQGR------Q 763 (807)
T ss_pred eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH---HHHHhhhhhcCCCCc------c
Confidence 3 3344566779999999988999999999999999999776 88898754332 222222222221111 1
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
.....+..++.++++++.+||+.+-++||+++++...|++.+
T Consensus 764 ~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 764 VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 122234455668999999999999999999999999887654
No 76
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.4e-35 Score=331.12 Aligned_cols=269 Identities=22% Similarity=0.328 Sum_probs=202.7
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch-hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG-QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999876 788999999875432 223457789999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|++ +++.+++.. ....++++.+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 84 YVH-TDLCQYMDK---HPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred CCC-cCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 996 577777754 234588899999999999999999996 9999999999999999999999999999754322
Q ss_pred CCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccc-----
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVE----- 1001 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----- 1001 (1052)
........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ...+....+...........
T Consensus 157 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
T cd07869 157 -SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMK--DIQDQLERIFLVLGTPNEDTWPGVH 233 (303)
T ss_pred -CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCc--cHHHHHHHHHHHhCCCChhhccchh
Confidence 122234578999999998764 467889999999999999999999997432 11222222222111100000
Q ss_pred ---ccccccc---ch--hhH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcC
Q 001561 1002 ---IIDASIW---HK--DRE-----KQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIG 1048 (1052)
Q Consensus 1002 ---~~~~~~~---~~--~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~ 1048 (1052)
..++... .. ... .....+.+++.+|++.||++|||+.|+++ ++.++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 234 SLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred hccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 0000000 00 000 11246789999999999999999999987 665554
No 77
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6.2e-36 Score=331.50 Aligned_cols=261 Identities=28% Similarity=0.476 Sum_probs=209.1
Q ss_pred hcCCcccCeEcccCceEEEEEEEC------CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT------NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRL 843 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 843 (1052)
..+|.+.+.||+|+||+||++... ++..+|+|.+........+.+.+|++++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 356888999999999999999742 34568999987666566678999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhccc---------CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeE
Q 001561 844 LIYSYMENGSLDYWLHESV---------DKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAH 914 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~k 914 (1052)
+||||+++++|.+++.... .....+++..++.++.|++.||+|||+. +++||||||+||++++++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 9999999999999987532 1223589999999999999999999986 999999999999999999999
Q ss_pred EeecccccccCCCCCe-eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHH
Q 001561 915 LADFGLSRLLRPYDTH-VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQ 992 (1052)
Q Consensus 915 l~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~ 992 (1052)
++|||.++........ ......+++.|+|||++.+..++.++||||||+++|||++ |++||.... ..+....+..
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~---~~~~~~~i~~ 237 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS---NNEVIECITQ 237 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHHc
Confidence 9999999865432221 1122345778999999998899999999999999999998 999986322 1222221111
Q ss_pred hhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 993 MKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
...... ....+.++.+++.+|++.+|.+||++.|+.+.|+++..
T Consensus 238 ----~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 238 ----GRVLQR---------PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred ----CCcCCC---------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 110000 01123468999999999999999999999999998864
No 78
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.9e-35 Score=334.03 Aligned_cols=199 Identities=28% Similarity=0.459 Sum_probs=174.6
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
.++|++.+.||+|+||.||+|... ++..+|+|.+.... ......+.+|++++++++||||++++++|.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367999999999999999999876 68889999887543 3344678999999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+++|+|.+++.. ...+++..+..++.+++.|++|||+. .+|+||||||+||++++++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 84 HMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 9999999999864 34578899999999999999999973 37999999999999999999999999999765322
Q ss_pred CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEV 977 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~ 977 (1052)
......|++.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred ---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 22335789999999999888899999999999999999999999963
No 79
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.1e-35 Score=325.50 Aligned_cols=255 Identities=27% Similarity=0.460 Sum_probs=205.8
Q ss_pred cCCcccCeEcccCceEEEEEEECC----CcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTN----GTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
++|++.+.||+|+||+||+|.+.. ...||+|.++... .....++.+|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568899999999999999998752 3579999887543 33456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+++++|.+++... ...+++..++.++.|++.|++|||+. +|+||||||+||++++++.++++|||+++...
T Consensus 84 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 84 TEYMENGSLDKFLREN---DGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEcCCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 9999999999998753 33689999999999999999999986 99999999999999999999999999998875
Q ss_pred CCCCe-eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccc
Q 001561 926 PYDTH-VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEII 1003 (1052)
Q Consensus 926 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
..... ......+++.|+|||...+..++.++||||||+++|||++ |..||.... ..+....+.. ....
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~---~~~~~~~~~~----~~~~--- 227 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS---NQDVIKAVED----GYRL--- 227 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC---HHHHHHHHHc----CCCC---
Confidence 22222 2222345678999999988899999999999999999998 999985322 1122221111 0000
Q ss_pred cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1004 DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
+.....+..+.+++.+|++.+|++||++.|+++.|+++
T Consensus 228 ------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 ------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00112234688999999999999999999999999875
No 80
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=7.7e-36 Score=343.03 Aligned_cols=262 Identities=24% Similarity=0.360 Sum_probs=206.2
Q ss_pred hcCCcccCeEcccCceEEEEEEEC------CCcEEEEEEecCCch-hhHHHHHHHHHHHHhcC-CCceeeeeceEeeCCe
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT------NGTKAAVKRLSGDCG-QMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGND 841 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 841 (1052)
.++|++.+.||+|+||.||+|... .+..||||++..... ...+.+.+|+++++++. ||||++++++|.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 567889999999999999999753 134799999975433 33457899999999996 9999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcccC----------------------------------------------------------
Q 001561 842 RLLIYSYMENGSLDYWLHESVD---------------------------------------------------------- 863 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------------------- 863 (1052)
.++||||+++|+|.++++....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 9999999999999998865311
Q ss_pred ----------------------------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC
Q 001561 864 ----------------------------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE 909 (1052)
Q Consensus 864 ----------------------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~ 909 (1052)
....+++..+..++.|+++|++|||+. +|+||||||+||++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeC
Confidence 013478889999999999999999986 9999999999999999
Q ss_pred CCCeEEeecccccccCCCCCe-eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHH
Q 001561 910 KFEAHLADFGLSRLLRPYDTH-VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLV 987 (1052)
Q Consensus 910 ~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~ 987 (1052)
++.+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |..||...... ....
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~--~~~~ 350 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD--STFY 350 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh--HHHH
Confidence 999999999999875432221 1223457788999999988889999999999999999997 99998643211 1111
Q ss_pred HHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 988 SWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
..+ ...... ........++.+++.+|++.+|++||++.++.++|+++-+
T Consensus 351 ~~~----~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 351 NKI----KSGYRM---------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHH----hcCCCC---------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 111 111000 0111234578999999999999999999999999998753
No 81
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.1e-36 Score=316.44 Aligned_cols=252 Identities=25% Similarity=0.318 Sum_probs=205.0
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|+..+.||+|.-|+||+++.+ ++..+|+|++.+... +...+.+.|-++|+.+.||.++.+++.++.+...++||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 34677889999999999999977 458899999987653 33456788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
|||+||+|....+.. .+..+++..++.+|.+++-||+|||-. |||+|||||+|||+.++|++.++||.++.....
T Consensus 157 eyCpGGdL~~LrqkQ--p~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQ--PGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred ecCCCccHHHHHhhC--CCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 999999999988754 567799999999999999999999997 999999999999999999999999998754311
Q ss_pred C----------------------------------C---------------------CeeeecccccccccCccccCCcC
Q 001561 927 Y----------------------------------D---------------------THVTTDLVGTLGYIPPEYSQTLT 951 (1052)
Q Consensus 927 ~----------------------------------~---------------------~~~~~~~~gt~~y~aPE~~~~~~ 951 (1052)
. . ......++||-.|+|||++.+..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 0 00112358999999999999999
Q ss_pred CCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCC
Q 001561 952 ATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDP 1031 (1052)
Q Consensus 952 ~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 1031 (1052)
++.++|+|+|||++|||+.|+.||-+....+ ... .++......+..+..+..+.+||++.+.+||
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~---Tl~------------NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP 376 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE---TLR------------NIVGQPLKFPEEPEVSSAAKDLIRKLLVKDP 376 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchh---hHH------------HHhcCCCcCCCCCcchhHHHHHHHHHhccCh
Confidence 9999999999999999999999996533222 111 1122222222223455689999999999999
Q ss_pred CCCCC----HHHHHH
Q 001561 1032 RRRPF----IEEVVT 1042 (1052)
Q Consensus 1032 ~~RPs----~~evl~ 1042 (1052)
.+|-. +.||-+
T Consensus 377 ~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 377 SKRLGSKRGAAEIKR 391 (459)
T ss_pred hhhhccccchHHhhc
Confidence 99987 777755
No 82
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.6e-35 Score=328.84 Aligned_cols=261 Identities=24% Similarity=0.316 Sum_probs=196.1
Q ss_pred cCCcccCeEcccCceEEEEEEEC--CCcEEEEEEecCCch--hhHHHHHHHHHHHHhc---CCCceeeeeceEe-----e
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT--NGTKAAVKRLSGDCG--QMEREFQAEVEALSRA---QHKNLVSLQGYCR-----H 838 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~-----~ 838 (1052)
++|++.+.||+|+||+||+|+.. ++..||+|+++.... .....+.+|+.+++.+ +||||++++++|. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36889999999999999999863 467899998864332 2234456777777766 6999999999885 2
Q ss_pred CCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeec
Q 001561 839 GNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADF 918 (1052)
Q Consensus 839 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~Df 918 (1052)
....++||||++ ++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 356899999996 5888888653 234588999999999999999999986 9999999999999999999999999
Q ss_pred ccccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc
Q 001561 919 GLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 919 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
|+++..... .......||+.|+|||++.+..++.++|||||||++|||++|++||.... ..+....+........
T Consensus 155 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~---~~~~~~~i~~~~~~~~ 229 (290)
T cd07862 155 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS---DVDQLGKILDVIGLPG 229 (290)
T ss_pred cceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCC---HHHHHHHHHHHhCCCC
Confidence 999875432 22334578999999999988889999999999999999999999997432 2233333322211100
Q ss_pred cccc----------cccccc---chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 999 EVEI----------IDASIW---HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 999 ~~~~----------~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..+. ...... ..........+.+++.+|++.||++||++.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000 000000 0011123346789999999999999999999985
No 83
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=6.4e-36 Score=330.13 Aligned_cols=257 Identities=28% Similarity=0.476 Sum_probs=206.5
Q ss_pred cCCcccCeEcccCceEEEEEEECC------CcEEEEEEecCCchh-hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTN------GTKAAVKRLSGDCGQ-MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRL 843 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 843 (1052)
++|.+.+.||+|+||.||+|...+ +..||+|.+...... ..+.+.+|++++++++||||+++++++..+...+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 468888999999999999998643 478999998765433 4578999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhccc----------CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCe
Q 001561 844 LIYSYMENGSLDYWLHESV----------DKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEA 913 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~ 913 (1052)
+||||+++++|.++++... .....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 9999999999999997542 1234578999999999999999999986 99999999999999999999
Q ss_pred EEeecccccccCCCCC-eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHH
Q 001561 914 HLADFGLSRLLRPYDT-HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVF 991 (1052)
Q Consensus 914 kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~ 991 (1052)
|++|||.++....... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ..+....+.
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~---~~~~~~~~~ 238 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS---NEEVIECIT 238 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC---HHHHHHHHH
Confidence 9999999976533221 11223356789999999999999999999999999999998 999986422 222222221
Q ss_pred HhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 992 QMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
...... .....+..+.+++.+|++.+|++||++.|+++.|++
T Consensus 239 ----~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 239 ----QGRLLQ---------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred ----cCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 111000 011223478999999999999999999999999863
No 84
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-35 Score=339.86 Aligned_cols=264 Identities=19% Similarity=0.253 Sum_probs=201.0
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
..+|++.+.||+|+||.||+|... +++.||+|... ...+.+|++++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 357999999999999999999865 78899999753 23467899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+. ++|..++.. ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+......
T Consensus 165 ~~-~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 165 YK-TDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred CC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 95 678777754 34578999999999999999999986 99999999999999999999999999997643332
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCC----chhHHHHHHHhhhcccccc---
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKN----CRDLVSWVFQMKSEKREVE--- 1001 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~--- 1001 (1052)
........||+.|+|||++.+..++.++||||+||++|||++|+.||....+.. .......+.......+...
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 233345689999999999998899999999999999999999998874322110 1111111111110000000
Q ss_pred ----------------ccccccc--chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 1002 ----------------IIDASIW--HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 1002 ----------------~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
...+... .........++.+++.+|++.||++|||++|+++ ++.++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence 0000000 0011123457889999999999999999999986 66554
No 85
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.6e-35 Score=337.86 Aligned_cols=246 Identities=28% Similarity=0.468 Sum_probs=192.7
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
+|+..+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 4566788999999999999865 68999999986543 334567899999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++|+|.+.. ...+..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 155 ~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~- 222 (353)
T PLN00034 155 DGGSLEGTH--------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM- 222 (353)
T ss_pred CCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc-
Confidence 999986532 245677889999999999999986 99999999999999999999999999998764321
Q ss_pred eeeecccccccccCccccCC-----cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQT-----LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
......+||..|+|||++.. ...+.++|||||||++|||++|+.||......+........ . .....
T Consensus 223 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~---~-~~~~~---- 294 (353)
T PLN00034 223 DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI---C-MSQPP---- 294 (353)
T ss_pred ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH---h-ccCCC----
Confidence 12234579999999998643 23456899999999999999999999732222111111111 0 00000
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
........++.+++.+|++.||++||++.|+++
T Consensus 295 -----~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 295 -----EAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred -----CCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011123347899999999999999999999987
No 86
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-38 Score=313.74 Aligned_cols=246 Identities=24% Similarity=0.374 Sum_probs=208.2
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
|.+.++||+|+||.||||.++ +|..+|+|.+..+ ....++..|+.+|++++.|++|+++|.|......|+|||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 566788999999999999865 7999999998654 3456789999999999999999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+..+.++- ...++++.++..+....++||+|||.. .-+|||||+.|||++.+|.+|++|||.|..+.+. -..
T Consensus 113 GSiSDI~R~---R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT-MAK 185 (502)
T KOG0574|consen 113 GSISDIMRA---RRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT-MAK 185 (502)
T ss_pred CcHHHHHHH---hcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhh-HHh
Confidence 999999875 456799999999999999999999997 7899999999999999999999999999876432 223
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccc-ccccccch
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI-IDASIWHK 1010 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1010 (1052)
...+.|||.|||||++..-.|+.++||||+|++..||..|++||..-.+ -+...-+ ..+.....
T Consensus 186 RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP---------------MRAIFMIPT~PPPTF~ 250 (502)
T KOG0574|consen 186 RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP---------------MRAIFMIPTKPPPTFK 250 (502)
T ss_pred hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc---------------cceeEeccCCCCCCCC
Confidence 3457999999999999999999999999999999999999999963110 0011111 11222234
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1011 DREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1011 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.++.++.++.+++++|+.+.|++|.|+.++++
T Consensus 251 KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 251 KPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 46677889999999999999999999999876
No 87
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.3e-35 Score=336.00 Aligned_cols=251 Identities=27% Similarity=0.340 Sum_probs=198.7
Q ss_pred CCcccCeEcccCceEEEEEEEC----CCcEEEEEEecCCc----hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT----NGTKAAVKRLSGDC----GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDR 842 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 842 (1052)
+|++.+.||+|+||+||+|+.. +++.||+|++.+.. ....+.+..|+.+++++ +||+|+++++++.+++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4788999999999999999753 57899999986432 22335578899999999 599999999999999999
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ----RDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 999999999999998864 34588999999999999999999986 99999999999999999999999999998
Q ss_pred ccCCCCCeeeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccc
Q 001561 923 LLRPYDTHVTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVE 1001 (1052)
Q Consensus 923 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1052)
.+............||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+. ......
T Consensus 154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~--~~~~~~----- 226 (332)
T cd05614 154 EFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVS--RRILKC----- 226 (332)
T ss_pred cccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHH--HHHhcC-----
Confidence 7644333334456899999999988765 47889999999999999999999996432222211111 111110
Q ss_pred cccccccchhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001561 1002 IIDASIWHKDREKQLLEMLEIACKCIDQDPRRRP-----FIEEVVT 1042 (1052)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1042 (1052)
++.. +......+.+++.+|++.||++|| +++++++
T Consensus 227 --~~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 227 --DPPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred --CCCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 0111 111234678999999999999999 6778775
No 88
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=7.7e-36 Score=324.69 Aligned_cols=252 Identities=24% Similarity=0.406 Sum_probs=203.0
Q ss_pred cCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEecc
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
++|++.+.||+|+||+||+|.+.++..+|+|.+.... ...+++.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4688889999999999999998777789999887543 334678999999999999999999999998889999999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+|+|.+++... ...+++..++.++.|++.|++|||+. +++|+||||+||++++++.+||+|||.++........
T Consensus 83 ~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05113 83 NGCLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT 156 (256)
T ss_pred CCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence 99999998753 23689999999999999999999986 9999999999999999999999999999865433222
Q ss_pred eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 931 VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......++..|+|||...+..++.++||||||+++|||++ |+.||.... ..+....+... ... . .+
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~---~~~~~~~~~~~---~~~-~--~~---- 223 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN---NSETVEKVSQG---LRL-Y--RP---- 223 (256)
T ss_pred ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC---HHHHHHHHhcC---CCC-C--CC----
Confidence 2222345678999999988889999999999999999999 999986322 11222221111 000 0 00
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
......+.+++.+|++.+|.+||++.++++.|+
T Consensus 224 ---~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 224 ---HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 012347899999999999999999999998764
No 89
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=6e-36 Score=335.29 Aligned_cols=239 Identities=24% Similarity=0.291 Sum_probs=192.3
Q ss_pred EcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCCh
Q 001561 779 IGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSL 854 (1052)
Q Consensus 779 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 854 (1052)
||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999875 67899999986432 23345678899999999999999999999999999999999999999
Q ss_pred hhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeeeec
Q 001561 855 DYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTD 934 (1052)
Q Consensus 855 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 934 (1052)
.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..... ......
T Consensus 81 ~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~ 152 (312)
T cd05585 81 FHHLQR----EGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD-DDKTNT 152 (312)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC-CCcccc
Confidence 998874 34588999999999999999999986 9999999999999999999999999999764322 222334
Q ss_pred ccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHH
Q 001561 935 LVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREK 1014 (1052)
Q Consensus 935 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1052)
.+||+.|+|||++.+..++.++||||+||++|||++|+.||... +........ .... . ..+..
T Consensus 153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~---~~~~~~~~~---~~~~--~---------~~~~~ 215 (312)
T cd05585 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE---NVNEMYRKI---LQEP--L---------RFPDG 215 (312)
T ss_pred ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC---CHHHHHHHH---HcCC--C---------CCCCc
Confidence 57999999999999999999999999999999999999999632 111211111 1110 0 01112
Q ss_pred HHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 001561 1015 QLLEMLEIACKCIDQDPRRRPF---IEEVVT 1042 (1052)
Q Consensus 1015 ~~~~l~~li~~cl~~dP~~RPs---~~evl~ 1042 (1052)
...++.+++.+|++.||++||+ +.|++.
T Consensus 216 ~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 216 FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 2346889999999999999985 555554
No 90
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=336.26 Aligned_cols=244 Identities=23% Similarity=0.289 Sum_probs=198.3
Q ss_pred cCCcccCeEcccCceEEEEEEECC--CcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTN--GTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~--g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
++|++.+.||+|+||.||+|.+.. +..||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468889999999999999997543 3689999986432 22345678899999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 110 ~Ey~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 110 LEFVIGGEFFTFLRR----NKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 999999999999874 34588999999999999999999986 99999999999999999999999999998754
Q ss_pred CCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||... +.......+. ... ..
T Consensus 183 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~---~~~~~~~~i~---~~~--~~---- 246 (340)
T PTZ00426 183 TR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYAN---EPLLIYQKIL---EGI--IY---- 246 (340)
T ss_pred CC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCC---CHHHHHHHHh---cCC--CC----
Confidence 32 23457999999999998888999999999999999999999999632 1111111111 110 00
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRP-----FIEEVVT 1042 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1042 (1052)
.+......+.+++.+|++.||++|+ +++|+++
T Consensus 247 -----~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 247 -----FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred -----CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 0111223678999999999999995 8888876
No 91
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=364.40 Aligned_cols=480 Identities=27% Similarity=0.311 Sum_probs=296.0
Q ss_pred ecCCCCcccCCccccCCcCCCeEecCCCCCCCCCcccccCCCCccEEeccCCcccCcccccccccCCccEEEccCcccCC
Q 001561 93 LPRKGLKGIIPRSLGHLNQLKLLDLSCNHLEGVVPVELSNLKQLEVLDLSHNMLSGPVSGMLAGLNLIQSLNVSSNSFNG 172 (1052)
Q Consensus 93 L~~~~l~g~~~~~l~~l~~L~~L~Ls~n~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 172 (1052)
++..+++- ||.-+..-..++.|+++.|.+-...-+.....-+|+.||||+|.++. .|-.+..+..|+.|+++.|.|..
T Consensus 5 ~s~~~l~~-ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~~-fp~~it~l~~L~~ln~s~n~i~~ 82 (1081)
T KOG0618|consen 5 ASDEQLEL-IPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQISS-FPIQITLLSHLRQLNLSRNYIRS 82 (1081)
T ss_pred cccccCcc-cchhhccHHHHHhhhccccccccCchHHhhheeeeEEeecccccccc-CCchhhhHHHHhhcccchhhHhh
Confidence 33444433 45555555557777777777653322333344448888888887764 44566777778888888888877
Q ss_pred cccccccCCcccEEEecCCccCCccchhhhhcccccceeeccCcccccccccCCCCCCCCEEEcccccCCCCCCccccCC
Q 001561 173 SLFELGEFSNLAVFNISNNSFTGKLNSRIWSASKEIQILDLSMNHFMGSLQGLDHSPSLKQLHVDNNLLGGDLPDSLYSM 252 (1052)
Q Consensus 173 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~l~~l 252 (1052)
++...+++.+|++|+|.+|++. .+|. -+..+++|++||+|.|++...|..+..++.++++..++|.-. ..++..
T Consensus 83 vp~s~~~~~~l~~lnL~~n~l~-~lP~-~~~~lknl~~LdlS~N~f~~~Pl~i~~lt~~~~~~~s~N~~~----~~lg~~ 156 (1081)
T KOG0618|consen 83 VPSSCSNMRNLQYLNLKNNRLQ-SLPA-SISELKNLQYLDLSFNHFGPIPLVIEVLTAEEELAASNNEKI----QRLGQT 156 (1081)
T ss_pred Cchhhhhhhcchhheeccchhh-cCch-hHHhhhcccccccchhccCCCchhHHhhhHHHHHhhhcchhh----hhhccc
Confidence 7777778888888888888776 3343 345677788888888888888777777777778888777222 122222
Q ss_pred CCCcEEEcccCcCCchhhhhhcCCCCCcEEEccCCcCCCCCcccccCccccccccccCCcccCCCCcccccCCCCcEEEe
Q 001561 253 SSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFGNQFSGKLPNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLDL 332 (1052)
Q Consensus 253 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L 332 (1052)
. .+.++|..|.+.+.++..+..++. .|+|.+|.+. -..+.++.+|+.+....|+++... -..++|+.|+.
T Consensus 157 ~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a 226 (1081)
T KOG0618|consen 157 S-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELE----ISGPSLTALYA 226 (1081)
T ss_pred c-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEE----ecCcchheeee
Confidence 2 777777777777777777776666 6778887776 234566777777777777776321 12356777777
Q ss_pred cCccccCcCCcccccCCccceeecccccccCCCCccccCCCccceeecccccccccCchhhccCCcCcEEeccCCcCCCC
Q 001561 333 RNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPLPNSLSDCHDLKILSLAKNELSGQVPESFGKLTSLLFLSLSNNSFNHL 412 (1052)
Q Consensus 333 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l 412 (1052)
+.|.++...+ .+ --.+|+++++++|+++ .+|++++.+.+|+.|+..+|+++ .+|..+....+|+.|++.+|.+..+
T Consensus 227 ~~n~l~~~~~-~p-~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yi 302 (1081)
T KOG0618|consen 227 DHNPLTTLDV-HP-VPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYI 302 (1081)
T ss_pred ccCcceeecc-cc-ccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhC
Confidence 7777773222 22 2356777777777777 45677777777777777777775 6677777777777777777777776
Q ss_pred cccchhhccCcccceEeccccccCccCCccccCCCc-ccEEEccCCccccCcch-hhhcCCCCcEEeCcCccCCCCCChh
Q 001561 413 SGTLSVLQQCKNLTTLILTKNFVGEEIPENVGGFES-LMVLALGNCGLKGHIPV-WLLRCKKLQVLDLSWNHFDGNIPPW 490 (1052)
Q Consensus 413 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~ 490 (1052)
|.. +.+.+.|++|+|..|.+....+..+.-+.. |..|+.+.|++. ..|. .=..++.|+.|++.+|+++...-+.
T Consensus 303 p~~---le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~ 378 (1081)
T KOG0618|consen 303 PPF---LEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPV 378 (1081)
T ss_pred CCc---ccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhh
Confidence 643 345677777777777774333322322222 555555555554 2221 1112445566666666666555555
Q ss_pred hccCCCCCeEeccCCcccccCCcchhhhhhhcccCCCCCCCCCCCCccceeeccccCCCcCCCCCCCCCCeeeeecCccc
Q 001561 491 IGQMENLFYLDFSNNTLTGEIPKSLTELKSLISSNCTSSNPTASAGIPLYVKHNRSTNGLPYNQASSFPPSVFLSNNRIN 570 (1052)
Q Consensus 491 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~Ls~N~l~ 570 (1052)
+.++++|+.|+|++|++.......+.++..| ++|+||+|+++
T Consensus 379 l~~~~hLKVLhLsyNrL~~fpas~~~kle~L--------------------------------------eeL~LSGNkL~ 420 (1081)
T KOG0618|consen 379 LVNFKHLKVLHLSYNRLNSFPASKLRKLEEL--------------------------------------EELNLSGNKLT 420 (1081)
T ss_pred hccccceeeeeecccccccCCHHHHhchHHh--------------------------------------HHHhcccchhh
Confidence 5566666666666666553333334444444 23556666665
Q ss_pred ccCCcccccccccceecccCceeeecCCCCcccccCcCeeeCCCCcCCCC-CCccccCccccCeeeecccc
Q 001561 571 GTIPPEIGQLKHLHVLDLSRNNITGTIPSSISEIRNLEVLDLSSNDLHGS-IPGSFEKLTFLSKFSVANNH 640 (1052)
Q Consensus 571 g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~LdLs~N~l~g~-~p~~~~~l~~L~~l~l~~N~ 640 (1052)
.+|.++.++..|++|...+|+|. ..| .+..+++|+.+|||.|+|+-. +|...- -++|++|||++|.
T Consensus 421 -~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 421 -TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALP-SPNLKYLDLSGNT 487 (1081)
T ss_pred -hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCC-CcccceeeccCCc
Confidence 45566666666666666666665 445 556666666666666665532 222221 1556666666654
No 92
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.1e-36 Score=324.21 Aligned_cols=251 Identities=24% Similarity=0.419 Sum_probs=201.4
Q ss_pred cCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEecc
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
.+|++.+.||+|+||.||+|.+.++..+|+|.+..... ...++.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 35778899999999999999988778899999864432 34568889999999999999999999999999999999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+++|.+++... ...+++..++.++.|++.|++|||+. +|+||||||+||++++++.+|++|||.++........
T Consensus 83 ~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~ 156 (256)
T cd05059 83 NGCLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156 (256)
T ss_pred CCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence 99999998753 33689999999999999999999986 9999999999999999999999999999865432221
Q ss_pred eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 931 VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......++..|+|||...+..++.++||||||+++|||++ |+.||..... .+....+. .. . ....
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~---~~-~--~~~~----- 222 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN---SEVVESVS---AG-Y--RLYR----- 222 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH---HHHHHHHH---cC-C--cCCC-----
Confidence 1122234457999999988899999999999999999999 8999864221 12211111 10 0 0000
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWL 1044 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1044 (1052)
+...+.++.+++.+|+..+|++||++.|+++.|
T Consensus 223 --~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 --PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred --CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 111344789999999999999999999999986
No 93
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.5e-35 Score=323.32 Aligned_cols=253 Identities=28% Similarity=0.465 Sum_probs=204.1
Q ss_pred cCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEecc
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
++|++.+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|++++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 46888999999999999999988888999999875433 3456899999999999999999999875 456889999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+++|.++++.. ....+++..++.++.+++.|++|||+. +|+||||||+||++++++.++++|||.+..+......
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05070 84 KGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence 99999998753 234589999999999999999999986 9999999999999999999999999999876443222
Q ss_pred eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 931 VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......++..|+|||...+..++.++||||||+++|||++ |+.||... ...+....... ....
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~---~~~~~~~~~~~----~~~~--------- 222 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM---NNREVLEQVER----GYRM--------- 222 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCC---CHHHHHHHHHc----CCCC---------
Confidence 2222345668999999888889999999999999999999 89999642 22222222111 1000
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
+.+...+..+.+++.+|+..+|++|||++++.++|++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111223478999999999999999999999999975
No 94
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.3e-35 Score=323.31 Aligned_cols=249 Identities=33% Similarity=0.538 Sum_probs=194.1
Q ss_pred ccCeEcccCceEEEEEEEC-----CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 775 QANIIGCGGFGLVYKATLT-----NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 775 ~~~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+.+.||.|.||.||+|.+. .+..|+||.+.... ....+++.+|++.+++++||||++++|++.+.+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4578999999999999876 25679999996543 33467899999999999999999999999988889999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++|+|.++++.. ....+++..+..|+.|+++||+|||+. +++|+||+++||++++++.+||+|||++.......
T Consensus 83 ~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 83 CPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp -TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred ccccccccccccc--ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 9999999999874 345689999999999999999999996 99999999999999999999999999998763222
Q ss_pred Ce-eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 929 TH-VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 929 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.. ......+...|+|||.+....++.++||||||+++||+++ |+.||... ...+....+ ..... ...
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~---~~~~~~~~~---~~~~~-~~~---- 226 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY---DNEEIIEKL---KQGQR-LPI---- 226 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS---CHHHHHHHH---HTTEE-TTS----
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccc---ccccc-cee----
Confidence 22 2233456779999999988889999999999999999999 78998532 222222222 11111 111
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWL 1044 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1044 (1052)
+......+.+++.+||+.+|++||++.++++.|
T Consensus 227 -----~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 227 -----PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -----BTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -----ccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 111233688999999999999999999999986
No 95
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=330.22 Aligned_cols=255 Identities=24% Similarity=0.362 Sum_probs=212.4
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchh---hHHHHHHHHHHHHhcC-CCceeeeeceEeeCCeEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQ---MEREFQAEVEALSRAQ-HKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 844 (1052)
...|++.+.||+|.||.||+++.. +|+.+|+|.+.+.... ..+.+.+|+.+|+++. |||||.+.++|++....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 456888899999999999999876 5999999999866543 3457899999999998 9999999999999999999
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCC----CCeEEeeccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEK----FEAHLADFGL 920 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~----~~~kl~DfG~ 920 (1052)
|||+++||.|.+.+... .+++.++..++.|++.|++|||+. +|+|||+||+|+|+... +.+|++|||+
T Consensus 114 vmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 99999999999998764 389999999999999999999996 99999999999999633 5799999999
Q ss_pred ccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 921 SRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 921 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
|..... .......+||+.|+|||++....|+.++||||+||++|.|++|.+||...... .... .......
T Consensus 186 a~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~---~~~~---~i~~~~~-- 255 (382)
T KOG0032|consen 186 AKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF---EIFL---AILRGDF-- 255 (382)
T ss_pred ceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh---HHHH---HHHcCCC--
Confidence 998875 44566789999999999999999999999999999999999999999743211 1111 1111111
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
.++ .++.......+.++++.|+..||.+|+++.++++ |+.+.
T Consensus 256 -~f~----~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 256 -DFT----SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred -CCC----CCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 122 2223344558899999999999999999999998 55544
No 96
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.3e-35 Score=332.04 Aligned_cols=241 Identities=23% Similarity=0.319 Sum_probs=194.5
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENG 852 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 852 (1052)
+.||+|+||.||+|... +|..||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999865 78999999987542 223345678999999999999999999999999999999999999
Q ss_pred ChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeee
Q 001561 853 SLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVT 932 (1052)
Q Consensus 853 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 932 (1052)
+|..++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~ 152 (323)
T cd05595 81 ELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATM 152 (323)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Ccc
Confidence 99888864 34689999999999999999999986 99999999999999999999999999987542221 222
Q ss_pred ecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhh
Q 001561 933 TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDR 1012 (1052)
Q Consensus 933 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1052)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+. ... .. .+
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~---~~~~~~~~~---~~~--~~---------~p 215 (323)
T cd05595 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HERLFELIL---MEE--IR---------FP 215 (323)
T ss_pred ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC---HHHHHHHHh---cCC--CC---------CC
Confidence 34579999999999998899999999999999999999999996321 111111111 000 00 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001561 1013 EKQLLEMLEIACKCIDQDPRRRP-----FIEEVVT 1042 (1052)
Q Consensus 1013 ~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1042 (1052)
.....++.+++.+|++.||++|| ++.++++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 12234688999999999999998 8888875
No 97
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.2e-35 Score=322.08 Aligned_cols=262 Identities=23% Similarity=0.351 Sum_probs=211.9
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|++++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999876 78999999886322 233567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++.........+++..+..++.+++.|++|||+. +|+||||||+||++++++.++++|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999999876554566789999999999999999999986 999999999999999999999999999876543
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
... ......+++.|+|||...+..++.++|||||||++|+|++|+.||.... .+..+...... ......
T Consensus 159 ~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~-~~~~~~----- 227 (267)
T cd08224 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSLCKKIE-KCDYPP----- 227 (267)
T ss_pred CCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC----ccHHHHHhhhh-cCCCCC-----
Confidence 221 1233468889999999988889999999999999999999999985321 11111111111 000000
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
.........+.+++.+|+..+|++||++.+++++|+++.+
T Consensus 228 ---~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~~ 267 (267)
T cd08224 228 ---LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMHA 267 (267)
T ss_pred ---CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhcC
Confidence 0011334478899999999999999999999999998753
No 98
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.7e-35 Score=323.09 Aligned_cols=255 Identities=26% Similarity=0.433 Sum_probs=204.1
Q ss_pred hcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.++|++.+.||+|+||.||+|.+.++..||+|++..... ..+++.+|++++++++||||+++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence 356899999999999999999887777899999875432 3457899999999999999999999875 45679999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++|+|.+++... ....+++..+..++.|+++||+|+|+. +++||||||+||++++++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 83 SKGSLLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred CCCcHHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 999999999753 234578999999999999999999986 999999999999999999999999999987654332
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.......++..|+|||+..+..++.++||||||+++|||++ |+.||.... ....... ... ...
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~---~~~~~~~---~~~-~~~--------- 221 (262)
T cd05071 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV---NREVLDQ---VER-GYR--------- 221 (262)
T ss_pred ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC---hHHHHHH---Hhc-CCC---------
Confidence 22223356678999999988889999999999999999999 888986322 1111111 110 000
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
.......+..+.+++.+|++++|++||++.++++.|++.
T Consensus 222 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 222 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 011123345788999999999999999999999999863
No 99
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.3e-35 Score=333.61 Aligned_cols=257 Identities=24% Similarity=0.401 Sum_probs=203.7
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCc----EEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGT----KAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
.+|+..+.||+|+||.||+|.+. +++ .||+|++.... ....+++.+|+.+++.++||||++++++|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46899999999999999999864 343 48999987543 34556788999999999999999999999764 5679
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
|+||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 86 ITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred eeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccc
Confidence 99999999999998753 34578899999999999999999986 9999999999999999999999999999876
Q ss_pred CCCCCeee-ecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccc
Q 001561 925 RPYDTHVT-TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI 1002 (1052)
Q Consensus 925 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
........ ....++..|+|||++.+..++.++||||||+++|||++ |+.||+... ..+..+.. .... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~---~~~~~~~~----~~~~--~~ 230 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP---ASEISSIL----EKGE--RL 230 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHH----hCCC--CC
Confidence 54333222 22234678999999999999999999999999999998 999986421 11211111 1110 00
Q ss_pred ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCcc
Q 001561 1003 IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGID 1050 (1052)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1050 (1052)
.. +..+...+.+++.+|++.+|.+||++.++++.+..+..+
T Consensus 231 ~~-------~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 231 PQ-------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred CC-------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 00 111223688999999999999999999999999877654
No 100
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=329.16 Aligned_cols=258 Identities=26% Similarity=0.384 Sum_probs=213.6
Q ss_pred hhcCCcccCeEcccCceEEEEEEECC---Cc--EEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLTN---GT--KAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDR 842 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~~---g~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 842 (1052)
.++.....+.||+|.||.||+|.+.+ |+ .||||..+.++ ....+.|..|..+|+.++|||||+++|+|.+. ..
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~ 465 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PM 465 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ce
Confidence 34455667889999999999998653 33 58999988754 45567799999999999999999999999864 68
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
|+|||.++.|.|.+|++.. ...++......++.||..||+|||+- .+|||||.++|||+.....||++|||+++
T Consensus 466 WivmEL~~~GELr~yLq~n---k~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR 539 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQN---KDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSR 539 (974)
T ss_pred eEEEecccchhHHHHHHhc---cccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhh
Confidence 9999999999999999873 45688899999999999999999995 99999999999999999999999999999
Q ss_pred ccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccc
Q 001561 923 LLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVE 1001 (1052)
Q Consensus 923 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1052)
.+........+...-...|||||.+.-++++.++|||.|||++||++. |..||.+....+ ..-
T Consensus 540 ~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD----------------VI~ 603 (974)
T KOG4257|consen 540 YLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD----------------VIG 603 (974)
T ss_pred hccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc----------------eEE
Confidence 887655444443344568999999999999999999999999999988 999997533221 111
Q ss_pred cccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 1002 IIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
.+...-..+.++.++..++.++.+||..+|.+||.+.|+...|+++.+
T Consensus 604 ~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 604 HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 122222334456677789999999999999999999999999988755
No 101
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=8.1e-36 Score=352.29 Aligned_cols=255 Identities=24% Similarity=0.320 Sum_probs=205.1
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCC-----
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGN----- 840 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 840 (1052)
..++|++.+.||+|+||+||+|+.. +|+.||||++.... ......+.+|+..+..++|+|++++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 3468999999999999999999754 78999999986542 334456789999999999999999988775432
Q ss_pred ---eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEee
Q 001561 841 ---DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLAD 917 (1052)
Q Consensus 841 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~D 917 (1052)
..++||||+++|+|.+++.........+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEe
Confidence 36799999999999999987655566799999999999999999999986 999999999999999999999999
Q ss_pred cccccccCCCC-CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhc
Q 001561 918 FGLSRLLRPYD-THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSE 996 (1052)
Q Consensus 918 fG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 996 (1052)
||+++.+.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+..... ...
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~---~~~~~~~~~---~~~ 260 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE---NMEEVMHKT---LAG 260 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC---CHHHHHHHH---hcC
Confidence 99998764322 22233467999999999999999999999999999999999999999632 212222111 111
Q ss_pred ccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 997 KREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
. .. ..+.....++.+++.+|++.+|++||++.++++
T Consensus 261 ~-~~---------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 261 R-YD---------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred C-CC---------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 0 00 011123347889999999999999999999976
No 102
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.2e-35 Score=323.39 Aligned_cols=261 Identities=23% Similarity=0.339 Sum_probs=209.9
Q ss_pred cCCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||.||+|.. .++..||||.+.... .....++.+|+++++.++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3678889999999999999985 478999999876432 233457889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++++|.+++.........+++..++.++.|++.|++|||+. +++|+||||+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999999875444456789999999999999999999986 999999999999999999999999999887643
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
... ......|++.|+|||...+..++.++||||||+++|+|++|..||.... .+..+....... . ..+.
T Consensus 159 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~-~-----~~~~ 227 (267)
T cd08229 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSLCKKIEQ-C-----DYPP 227 (267)
T ss_pred CCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCccccc----chHHHHhhhhhc-C-----CCCC
Confidence 322 2233568899999999988889999999999999999999999985321 111111111110 0 0000
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
. .......++.+++.+|++.+|.+||||.+|++.++++.
T Consensus 228 ~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 228 L---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred C---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0 11123457899999999999999999999999998874
No 103
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.6e-35 Score=345.91 Aligned_cols=266 Identities=20% Similarity=0.312 Sum_probs=198.4
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeC--------C
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHG--------N 840 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------~ 840 (1052)
.++|++.+.||+|+||+||+|... +++.||||++.... ....+|+.++++++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 467999999999999999999865 68899999886432 2245799999999999999999876432 2
Q ss_pred eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCC-CeEEeecc
Q 001561 841 DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKF-EAHLADFG 919 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~-~~kl~DfG 919 (1052)
..++||||+++ ++.+++.........+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccc
Confidence 35689999975 67777765544566789999999999999999999986 999999999999999664 69999999
Q ss_pred cccccCCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc
Q 001561 920 LSRLLRPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 920 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
+|+.+.... ......||+.|+|||++.+ ..++.++||||+||++|||++|++||.... ..+....+........
T Consensus 217 la~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~---~~~~~~~i~~~~~~p~ 291 (440)
T PTZ00036 217 SAKNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS---SVDQLVRIIQVLGTPT 291 (440)
T ss_pred cchhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHhCCCC
Confidence 998764322 2234578999999998765 468999999999999999999999996432 1122211111111000
Q ss_pred c----------cc-----cccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcC
Q 001561 999 E----------VE-----IIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIG 1048 (1052)
Q Consensus 999 ~----------~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~ 1048 (1052)
. .. +....+....+...+.++.+++.+|++.||.+|||+.|+++ +++++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 0 00 00000001111123457899999999999999999999986 665543
No 104
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.1e-35 Score=336.35 Aligned_cols=252 Identities=23% Similarity=0.289 Sum_probs=201.9
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||+||+|... +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36889999999999999999865 78999999987543 234456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 999999999998753 34689999999999999999999986 999999999999999999999999999987654
Q ss_pred CCCeeeecccccccccCccccC------CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQ------TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
..........||+.|+|||++. ...++.++|||||||++|||++|+.||.... .......+. ......
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~---~~~~~~~i~---~~~~~~ 228 (330)
T cd05601 155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT---SAKTYNNIM---NFQRFL 228 (330)
T ss_pred CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC---HHHHHHHHH---cCCCcc
Confidence 4333334457999999999876 4567889999999999999999999996322 111111111 111111
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
... ........+.+++.+|++ +|++||++.++++
T Consensus 229 ~~~-------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 229 KFP-------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCC-------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 111 011223468899999998 9999999999985
No 105
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.6e-35 Score=333.95 Aligned_cols=241 Identities=23% Similarity=0.314 Sum_probs=195.0
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENG 852 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 852 (1052)
++||+|+||.||+|... +|+.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 68999999987542 223456788999999999999999999999999999999999999
Q ss_pred ChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeee
Q 001561 853 SLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVT 932 (1052)
Q Consensus 853 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 932 (1052)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 ~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~ 152 (328)
T cd05593 81 ELFFHLSR----ERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATM 152 (328)
T ss_pred CHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCc-cccc
Confidence 99888864 34689999999999999999999986 9999999999999999999999999998764322 1222
Q ss_pred ecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhh
Q 001561 933 TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDR 1012 (1052)
Q Consensus 933 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1052)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+ .... .. .+
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~---~~~~~~~~---~~~~--~~---------~p 215 (328)
T cd05593 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HEKLFELI---LMED--IK---------FP 215 (328)
T ss_pred ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC---HHHHHHHh---ccCC--cc---------CC
Confidence 34579999999999998899999999999999999999999996321 11111111 1000 00 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001561 1013 EKQLLEMLEIACKCIDQDPRRRP-----FIEEVVT 1042 (1052)
Q Consensus 1013 ~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1042 (1052)
.....++.+++.+|+++||++|| ++.|+++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 12234688999999999999997 8898875
No 106
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.4e-35 Score=326.03 Aligned_cols=267 Identities=25% Similarity=0.379 Sum_probs=201.5
Q ss_pred CcccCeEcccCceEEEEEEE-----CCCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC--CeEEE
Q 001561 773 FNQANIIGCGGFGLVYKATL-----TNGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG--NDRLL 844 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 844 (1052)
|+..+.||+|+||+||++.. .++..||+|.+.... ......+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 48889999999999988653 357789999987553 23456788999999999999999999988654 35789
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
||||+++++|.+++.. ..+++..++.++.|++.|++|||+. +|+||||||+||++++++.++++|||+++..
T Consensus 86 v~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 86 IMEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccccc
Confidence 9999999999999864 2489999999999999999999986 9999999999999999999999999999876
Q ss_pred CCCCCee--eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccc
Q 001561 925 RPYDTHV--TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI 1002 (1052)
Q Consensus 925 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
....... .....++..|+|||......++.++||||||+++|||++|+.||..... ...+...+...........+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPK-KFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcc-hhhhhhcccccccchhhhhhh
Confidence 5322211 1223456679999999888899999999999999999999999853211 101111000000000000001
Q ss_pred ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 1003 IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
.+.......+...+.++.+++.+|++.+|++||++++++++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1111111111223457899999999999999999999999999874
No 107
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-36 Score=327.09 Aligned_cols=257 Identities=27% Similarity=0.404 Sum_probs=213.3
Q ss_pred hhcCCcccCeEcccCceEEEEEEECC-CcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLTN-GTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
.+.+..+.++||.|.||.||.|.|+. .-.||||.++.+.. ..++|..|..+|+.++|||+|+++|+|..+..+|||+|
T Consensus 265 eRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTE 343 (1157)
T KOG4278|consen 265 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITE 343 (1157)
T ss_pred cchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEe
Confidence 34456678899999999999999874 56899999986644 45679999999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
||.+|+|.+||++. ....++.-..+.||.||+.|+.||... ++||||+.++|.|+.++-.|||+|||+++.+..+
T Consensus 344 fM~yGNLLdYLRec--nr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 344 FMCYGNLLDYLREC--NRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD 418 (1157)
T ss_pred cccCccHHHHHHHh--chhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCC
Confidence 99999999999976 344567778899999999999999984 9999999999999999999999999999998654
Q ss_pred CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
...-....--...|.|||-+....++.|+|||+|||+|||+.| |-.||.+..-.+ ++. ++...
T Consensus 419 TYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq-------VY~---------LLEkg 482 (1157)
T KOG4278|consen 419 TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYG---------LLEKG 482 (1157)
T ss_pred ceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH-------HHH---------HHhcc
Confidence 3322222333558999999988899999999999999999999 888886422111 111 12222
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
...+.++.++..+++||+.||++.|.+||+++|+-+.+|.+
T Consensus 483 yRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 483 YRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred ccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 33344556777899999999999999999999999999876
No 108
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2e-35 Score=338.96 Aligned_cols=251 Identities=24% Similarity=0.315 Sum_probs=199.2
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36889999999999999999875 68999999987432 223355788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||+++.+..
T Consensus 81 E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 81 EYLPGGDMMTLLMK----KDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCCcHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999999874 34589999999999999999999986 999999999999999999999999999876432
Q ss_pred CCCe-------------------------------------eeecccccccccCccccCCcCCCcccchHHHHHHHHHHH
Q 001561 927 YDTH-------------------------------------VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELL 969 (1052)
Q Consensus 927 ~~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell 969 (1052)
.... .....+||+.|+|||++....++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 1100 011246999999999999989999999999999999999
Q ss_pred cCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 001561 970 TGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPF---IEEVVT 1042 (1052)
Q Consensus 970 tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 1042 (1052)
+|+.||.... ..+....+. ........... ......+.+++.+|+. +|.+|++ +.|+++
T Consensus 234 ~G~~Pf~~~~---~~~~~~~i~---~~~~~~~~~~~-------~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 234 VGYPPFCSDN---PQETYRKII---NWKETLQFPDE-------VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred cCCCCCCCCC---HHHHHHHHH---cCCCccCCCCC-------CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9999996422 112111111 11111111110 0123467889999996 9999998 888876
No 109
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.8e-35 Score=323.61 Aligned_cols=251 Identities=23% Similarity=0.295 Sum_probs=198.1
Q ss_pred EcccCceEEEEEEEC-CCcEEEEEEecCCchh---hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCCh
Q 001561 779 IGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQ---MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSL 854 (1052)
Q Consensus 779 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 854 (1052)
||+|+||+||+|... +++.||+|.+...... ..+.+..|++++++++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999865 7889999998654322 234567899999999999999999999999999999999999999
Q ss_pred hhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeeeec
Q 001561 855 DYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTD 934 (1052)
Q Consensus 855 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 934 (1052)
.+++.........+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++........ ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence 988865444456789999999999999999999986 999999999999999999999999999987643322 2234
Q ss_pred ccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHH
Q 001561 935 LVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREK 1014 (1052)
Q Consensus 935 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1052)
..||+.|+|||++.+..++.++||||||+++|||++|+.||........ ........... . ...+..
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~---------~--~~~~~~ 223 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRILND---------S--VTYPDK 223 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh--HHHHHHhhccc---------C--CCCccc
Confidence 5789999999999999999999999999999999999999964221111 00000000000 0 011122
Q ss_pred HHHHHHHHHHHcccCCCCCCC-----CHHHHHH--HHhh
Q 001561 1015 QLLEMLEIACKCIDQDPRRRP-----FIEEVVT--WLDG 1046 (1052)
Q Consensus 1015 ~~~~l~~li~~cl~~dP~~RP-----s~~evl~--~L~~ 1046 (1052)
.+..+.+++.+|++.||++|| +++++++ ++++
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~ 262 (280)
T cd05608 224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD 262 (280)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence 344788999999999999999 7788876 4443
No 110
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.3e-35 Score=321.82 Aligned_cols=254 Identities=28% Similarity=0.430 Sum_probs=205.8
Q ss_pred hcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.++|++.++||+|+||.||+|...+++.||+|.+..... ...++.+|+.++++++|+||+++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 356888999999999999999988899999999875543 3457889999999999999999999874 45689999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++... .+..+++.++..++.|++.|++|||+. +++||||||+||++++++.++++|||.+........
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 83 ENGSLVDFLKTP--EGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 999999988653 345689999999999999999999986 999999999999999999999999999987653322
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.......++..|+|||+.....++.++||||||+++||+++ |+.||.... ..+....+.... . ..
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~---~~~~~~~~~~~~---~-~~------- 223 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT---NPEVIQNLERGY---R-MP------- 223 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC---hHHHHHHHHcCC---C-CC-------
Confidence 22223456678999999988889999999999999999999 999996432 222222211110 0 00
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
.....+.++.+++.+|++.+|++||+++++..+|++
T Consensus 224 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 224 --RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred --CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 011123478999999999999999999999999986
No 111
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.4e-35 Score=335.38 Aligned_cols=262 Identities=26% Similarity=0.397 Sum_probs=204.0
Q ss_pred hcCCcccCeEcccCceEEEEEEEC------CCcEEEEEEecCCch-hhHHHHHHHHHHHHhc-CCCceeeeeceEeeC-C
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT------NGTKAAVKRLSGDCG-QMEREFQAEVEALSRA-QHKNLVSLQGYCRHG-N 840 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~ 840 (1052)
.++|++.++||+|+||.||+|... +++.||+|+++.... ...+.+.+|+.++.++ +|+||++++++|... .
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 357899999999999999999642 347899999875432 2345678899999999 899999999988654 5
Q ss_pred eEEEEEEeccCCChhhhhhcccCC--------------------------------------------------------
Q 001561 841 DRLLIYSYMENGSLDYWLHESVDK-------------------------------------------------------- 864 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~~-------------------------------------------------------- 864 (1052)
..+++|||+++|+|.+++......
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 678999999999999988642210
Q ss_pred -ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee-eeccccccccc
Q 001561 865 -DSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV-TTDLVGTLGYI 942 (1052)
Q Consensus 865 -~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~ 942 (1052)
...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++.+....... .....++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 13689999999999999999999986 99999999999999999999999999998764332221 22345667899
Q ss_pred CccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHH
Q 001561 943 PPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLE 1021 (1052)
Q Consensus 943 aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1021 (1052)
|||++.+..++.++|||||||++|||++ |+.||...... +.....+ ....... .+.....++.+
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~--~~~~~~~----~~~~~~~---------~~~~~~~~~~~ 307 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID--EEFCRRL----KEGTRMR---------APEYATPEIYS 307 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc--HHHHHHH----hccCCCC---------CCccCCHHHHH
Confidence 9999999999999999999999999998 99999642211 1111111 1110000 01122346899
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 1022 IACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 1022 li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
++.+|++.+|++||++.|+++.|+++-+
T Consensus 308 l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 308 IMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999998754
No 112
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.9e-35 Score=338.45 Aligned_cols=253 Identities=23% Similarity=0.285 Sum_probs=200.3
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++||||+++++++.+++..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3567999999999999999999865 68899999986432 2233457789999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++...
T Consensus 121 v~Ey~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 121 VMEYMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 9999999999998864 2478888999999999999999986 9999999999999999999999999999876
Q ss_pred CCCCCeeeecccccccccCccccCCc----CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 925 RPYDTHVTTDLVGTLGYIPPEYSQTL----TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 925 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
...........+||+.|+|||++.+. .++.++|||||||++|||++|+.||.... .......+. ......
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~---~~~~~~~i~---~~~~~~ 266 (370)
T cd05596 193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS---LVGTYSKIM---DHKNSL 266 (370)
T ss_pred cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC---HHHHHHHHH---cCCCcC
Confidence 43322223346799999999987643 47889999999999999999999996422 111111111 111111
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRR--RPFIEEVVT 1042 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 1042 (1052)
...+ ....+.++.+++.+|++.+|++ ||++.|+++
T Consensus 267 ~~~~-------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 267 TFPD-------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCC-------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 1111 1122347889999999999988 999999976
No 113
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.4e-35 Score=326.32 Aligned_cols=263 Identities=26% Similarity=0.391 Sum_probs=202.8
Q ss_pred cCCcccCeEcccCceEEEEEEEC-----CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEee--CCeEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-----NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRH--GNDRL 843 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 843 (1052)
.+|++.+.||+|+||+||+|... ++..||+|++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46888999999999999999742 578999999886665566788999999999999999999998754 34678
Q ss_pred EEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccc
Q 001561 844 LIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRL 923 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~ 923 (1052)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 84 lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccc
Confidence 999999999999998653 34589999999999999999999986 999999999999999999999999999987
Q ss_pred cCCCCCeee--ecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCC-------Cc--hhHHHHHHH
Q 001561 924 LRPYDTHVT--TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGK-------NC--RDLVSWVFQ 992 (1052)
Q Consensus 924 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~-------~~--~~~~~~~~~ 992 (1052)
......... ....++..|+|||+..+..++.++||||||+++|||++|..|+...... .. .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence 644322111 1223445699999998888999999999999999999988775321100 00 000000000
Q ss_pred hhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 993 MKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
.... ............++.+++.+|++.+|++|||+.|+++.|+.++
T Consensus 238 ~~~~---------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 238 LLKN---------NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred HHhc---------CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 0000 0000111223347899999999999999999999999999874
No 114
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.1e-35 Score=339.49 Aligned_cols=251 Identities=26% Similarity=0.347 Sum_probs=202.7
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||+||+|+.. +++.||+|++.... ......+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36889999999999999999876 78999999987542 133456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 81 EYMPGGDLMNLLIRK----DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred cCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 999999999998753 5689999999999999999999986 999999999999999999999999999987654
Q ss_pred CC----------------------------CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCccc
Q 001561 927 YD----------------------------THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVC 978 (1052)
Q Consensus 927 ~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~ 978 (1052)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 32 01223457999999999999999999999999999999999999999643
Q ss_pred CCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 001561 979 KGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPF-IEEVVT 1042 (1052)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 1042 (1052)
. .......+. .......... ......++.+++.+|+. +|.+||+ +.|+++
T Consensus 234 ~---~~~~~~~i~---~~~~~~~~p~-------~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 234 T---LQETYNKII---NWKESLRFPP-------DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred C---HHHHHHHHh---ccCCcccCCC-------CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 2 111111111 1000000000 00133478899999997 9999999 999987
No 115
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4.3e-35 Score=335.54 Aligned_cols=252 Identities=23% Similarity=0.292 Sum_probs=195.3
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||+||+|... +++.||+|++.... ......+.+|++++.+++||+|+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46889999999999999999865 68899999987542 223346788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 81 E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 81 EFLPGGDMMTLLMK----KDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred cCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 99999999999874 34689999999999999999999986 999999999999999999999999999976432
Q ss_pred CCC----------------------------------eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCC
Q 001561 927 YDT----------------------------------HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGR 972 (1052)
Q Consensus 927 ~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~ 972 (1052)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 110 0012357999999999999889999999999999999999999
Q ss_pred CCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHccc--CCCCCCCCHHHHHH
Q 001561 973 RPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCID--QDPRRRPFIEEVVT 1042 (1052)
Q Consensus 973 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~--~dP~~RPs~~evl~ 1042 (1052)
.||.... ..+....+... .....+ .+.. ....++.+++.+|+. .++..||+++|+++
T Consensus 234 ~Pf~~~~---~~~~~~~i~~~---~~~~~~-p~~~------~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 234 PPFCSET---PQETYKKVMNW---KETLIF-PPEV------PISEKAKDLILRFCCEWEHRIGAPGVEEIKT 292 (363)
T ss_pred CCCCCCC---HHHHHHHHHcC---cCcccC-CCcC------CCCHHHHHHHHHHcCChhhcCCCCCHHHHhC
Confidence 9996422 12222211110 000011 1100 112356677777543 23345689999987
No 116
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.2e-35 Score=325.23 Aligned_cols=259 Identities=24% Similarity=0.398 Sum_probs=203.7
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC------CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCe
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT------NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGND 841 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 841 (1052)
..++|++.+.||+|+||.||+|.+. ++..||+|++.... .....++.+|+.+++.++||||+++++++.++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567999999999999999999753 24679999886432 2344568899999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcccCC------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEE
Q 001561 842 RLLIYSYMENGSLDYWLHESVDK------DSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHL 915 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl 915 (1052)
.++||||+++|+|.+++...... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 99999999999999998753221 23467889999999999999999986 9999999999999999999999
Q ss_pred eecccccccCCCCCee-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHh
Q 001561 916 ADFGLSRLLRPYDTHV-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQM 993 (1052)
Q Consensus 916 ~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 993 (1052)
+|||+++......... .....+++.|+|||++.+..++.++|||||||++|||++ |..||.... ..+....+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~---~~~~~~~~~~- 236 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS---NEQVLRFVME- 236 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHHHc-
Confidence 9999997654322211 112345778999999988889999999999999999999 788986321 1222221111
Q ss_pred hhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 994 KSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
...... +......+.+++.+|++.+|++||++.|+++.|++
T Consensus 237 ---~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 237 ---GGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred ---CCcCCC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 110000 11123468999999999999999999999998864
No 117
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=317.20 Aligned_cols=252 Identities=25% Similarity=0.381 Sum_probs=211.6
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
+-|...+.||+|.|+.|-.|++- +|++||||++.+.. ......+..|++.|+.++|||||++|++.......|+|.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 45777888999999999999744 89999999998653 3345578899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC-CCCCeEEeecccccccCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD-EKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~-~~~~~kl~DfG~a~~~~~ 926 (1052)
.-++|+|++|+-.+ +..+.++.+.+++.||+.|+.|+|+. ++||||+||+||.+- +-|-||++|||++-.+.+
T Consensus 98 LGD~GDl~DyImKH---e~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKH---EEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred ecCCchHHHHHHhh---hccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 99999999999763 55689999999999999999999998 999999999999765 668999999999988765
Q ss_pred CCCeeeecccccccccCccccCCcCCC-cccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTAT-CRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
. ......+|+..|-|||++.+..|+ +++||||+|||+|-+++|++||+...+.+. +.. ++|.
T Consensus 172 G--~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET---LTm------------ImDC 234 (864)
T KOG4717|consen 172 G--KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET---LTM------------IMDC 234 (864)
T ss_pred c--chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh---hhh------------hhcc
Confidence 4 334567999999999999888876 678999999999999999999986544332 111 2222
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
. ...+...+.+..++|..|+..||++|.+.+|++. ||+.+
T Consensus 235 K--YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~ 276 (864)
T KOG4717|consen 235 K--YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAG 276 (864)
T ss_pred c--ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCC
Confidence 1 1223455668899999999999999999999986 77665
No 118
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=4.6e-35 Score=323.85 Aligned_cols=251 Identities=26% Similarity=0.330 Sum_probs=200.5
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
.|++.++||+|+||+||+|... +++.||+|++..... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4788899999999999999865 689999999865332 223456789999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+++|+|.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNM--GNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 99999999888643 234689999999999999999999986 9999999999999999999999999999875432
Q ss_pred CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASI 1007 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
. ......|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+........
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~---~~~~~~~~~~~~~~--------- 221 (285)
T cd05605 156 E--TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK---VKREEVERRVKEDQ--------- 221 (285)
T ss_pred C--ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh---hHHHHHHHHhhhcc---------
Confidence 2 123347899999999998888999999999999999999999999742211 11111111110000
Q ss_pred cchhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001561 1008 WHKDREKQLLEMLEIACKCIDQDPRRRP-----FIEEVVT 1042 (1052)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1042 (1052)
...+......+.+++.+|++.||++|| +++++++
T Consensus 222 -~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 222 -EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred -cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 011122344788999999999999999 8888865
No 119
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.4e-35 Score=337.57 Aligned_cols=251 Identities=24% Similarity=0.301 Sum_probs=195.6
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
.|+..+.||+|+||+||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5888999999999999999865 68899999987542 2234568899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 82 ~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 82 YIPGGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999874 34578899999999999999999986 9999999999999999999999999998643210
Q ss_pred CC----------------------------------------------eeeecccccccccCccccCCcCCCcccchHHH
Q 001561 928 DT----------------------------------------------HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSF 961 (1052)
Q Consensus 928 ~~----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvwsl 961 (1052)
.. ......+||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 00 00123579999999999988889999999999
Q ss_pred HHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHH--cccCCCCCCCCHHH
Q 001561 962 GVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACK--CIDQDPRRRPFIEE 1039 (1052)
Q Consensus 962 Gvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~~e 1039 (1052)
||++|||++|+.||..... .+....+.. ......+ +.......++.+++.+ |...+|..||++.|
T Consensus 235 G~il~elltG~~Pf~~~~~---~~~~~~i~~---~~~~~~~-------~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTP---TETQLKVIN---WENTLHI-------PPQVKLSPEAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred hhHHHHHHhCCCCCcCCCH---HHHHHHHHc---cccccCC-------CCCCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence 9999999999999964221 111111110 0000000 0011123467788887 55666677999999
Q ss_pred HHH
Q 001561 1040 VVT 1042 (1052)
Q Consensus 1040 vl~ 1042 (1052)
+++
T Consensus 302 ~l~ 304 (381)
T cd05626 302 IKA 304 (381)
T ss_pred Hhc
Confidence 987
No 120
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.1e-35 Score=319.25 Aligned_cols=248 Identities=25% Similarity=0.359 Sum_probs=196.6
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCCh
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSL 854 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 854 (1052)
+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36999999999999865 78999999876543 34456789999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeee-e
Q 001561 855 DYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVT-T 933 (1052)
Q Consensus 855 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~-~ 933 (1052)
.+++.. ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+|++|||.+........... .
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 81 LTFLRT---EGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred HHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 999864 234588999999999999999999986 999999999999999999999999999976442211111 1
Q ss_pred cccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhh
Q 001561 934 DLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDR 1012 (1052)
Q Consensus 934 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1052)
...++..|+|||.+.+..++.++||||||+++|||++ |..||..... ........ .... ...+
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~---~~~~~~~~----~~~~---------~~~~ 218 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN---QQTREAIE----QGVR---------LPCP 218 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH---HHHHHHHH----cCCC---------CCCc
Confidence 1123457999999988889999999999999999998 9999863221 11111110 0000 0111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 1013 EKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 1013 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
...+..+.+++.+|++.+|++||++.|+.++|+.
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 219 ELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 1224478999999999999999999999999863
No 121
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=3.3e-35 Score=336.00 Aligned_cols=255 Identities=23% Similarity=0.268 Sum_probs=199.4
Q ss_pred HHhhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeE
Q 001561 767 LKSTNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDR 842 (1052)
Q Consensus 767 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 842 (1052)
....++|++.+.||+|+||.||+|... +++.||+|++.+.. ......+.+|+++++.++||||+++++++.+++..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 334578999999999999999999876 67899999986422 22344578899999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|.
T Consensus 119 ~lv~Ey~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~ 190 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCM 190 (370)
T ss_pred EEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccce
Confidence 999999999999998864 2478889999999999999999986 99999999999999999999999999998
Q ss_pred ccCCCCCeeeecccccccccCccccCCc----CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc
Q 001561 923 LLRPYDTHVTTDLVGTLGYIPPEYSQTL----TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 923 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
.............+||+.|+|||++... .++.++||||+||++|||++|+.||... ........+. ....
T Consensus 191 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~---~~~~~~~~i~---~~~~ 264 (370)
T cd05621 191 KMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD---SLVGTYSKIM---DHKN 264 (370)
T ss_pred ecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC---CHHHHHHHHH---hCCc
Confidence 7654333233456799999999987653 3778999999999999999999999632 1111111111 1111
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 001561 999 EVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRR--RPFIEEVVT 1042 (1052)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 1042 (1052)
...+ +........+.+++.+|+..++.+ ||++.|+++
T Consensus 265 ~~~~-------p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 265 SLNF-------PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred ccCC-------CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 1111 111122346788999999755543 889999987
No 122
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=8.9e-35 Score=320.13 Aligned_cols=245 Identities=25% Similarity=0.338 Sum_probs=192.6
Q ss_pred EcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCCh
Q 001561 779 IGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSL 854 (1052)
Q Consensus 779 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 854 (1052)
||+|+||.||+++.. +|+.||+|++.... ...++.+..|++++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999865 68999999986432 12234556799999999999999999999999999999999999999
Q ss_pred hhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeeeec
Q 001561 855 DYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTD 934 (1052)
Q Consensus 855 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 934 (1052)
.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~ 153 (277)
T cd05607 81 KYHIYNV--GERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQ 153 (277)
T ss_pred HHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeec
Confidence 9888643 234588999999999999999999986 99999999999999999999999999998764322 2234
Q ss_pred ccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHH
Q 001561 935 LVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREK 1014 (1052)
Q Consensus 935 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1052)
..|++.|+|||++.+..++.++||||+||++|||++|+.||......... ........... .... ...
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~--~~~~~~~~~~~--~~~~--------~~~ 221 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK--EELKRRTLEDE--VKFE--------HQN 221 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhH--HHHHHHhhccc--cccc--------ccc
Confidence 57899999999998888999999999999999999999999643211111 11111111000 0000 011
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1015 QLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1015 ~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...++.+++.+|+++||++||++.|+++
T Consensus 222 ~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 222 FTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred CCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 2346899999999999999999977653
No 123
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.3e-35 Score=328.59 Aligned_cols=241 Identities=25% Similarity=0.351 Sum_probs=193.2
Q ss_pred CeEcccCceEEEEEEEC----CCcEEEEEEecCCc----hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 777 NIIGCGGFGLVYKATLT----NGTKAAVKRLSGDC----GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+.||+|+||.||+++.. +++.||+|+++... ......+..|++++++++||||+++++++.+++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 57999999999999753 57889999987532 12234567899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++|+|.+++.. ...+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLER----EGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 999999998864 34578889999999999999999986 99999999999999999999999999987543222
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+ .... ..+
T Consensus 155 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~---~~~~~~~~---~~~~--~~~------ 219 (323)
T cd05584 155 -TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN---RKKTIDKI---LKGK--LNL------ 219 (323)
T ss_pred -CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC---HHHHHHHH---HcCC--CCC------
Confidence 22234579999999999988889999999999999999999999996421 11111111 1111 000
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRP-----FIEEVVT 1042 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1042 (1052)
+......+.+++.+|++++|++|| ++.++++
T Consensus 220 ---~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 220 ---PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred ---CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 111234688999999999999999 7888766
No 124
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.9e-35 Score=337.20 Aligned_cols=264 Identities=23% Similarity=0.328 Sum_probs=200.0
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCC-----eEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGN-----DRL 843 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 843 (1052)
+|+..+.||+|+||.||+|... +|+.||+|++.... ....+++.+|+++++.++||||+++++++...+ ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788899999999999999864 78999999986432 234467889999999999999999999998776 789
Q ss_pred EEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccc
Q 001561 844 LIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRL 923 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~ 923 (1052)
+|+||+. ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEeeccc-cCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 9999996 567776643 45689999999999999999999986 999999999999999999999999999987
Q ss_pred cCCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccc-
Q 001561 924 LRPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVE- 1001 (1052)
Q Consensus 924 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~- 1001 (1052)
.............+++.|+|||++.+ ..++.++||||+||++|||++|+.||..... .+....+...........
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i~~~~g~~~~~~~ 229 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP---IQQLDLITDLLGTPSLEAM 229 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH---HHHHHHHHHHcCCCCHHHH
Confidence 54433333344578999999998776 4578999999999999999999999964321 111111111110000000
Q ss_pred ----------c----ccc-cc--cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhh
Q 001561 1002 ----------I----IDA-SI--WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDG 1046 (1052)
Q Consensus 1002 ----------~----~~~-~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 1046 (1052)
+ ..+ .. ..........++.+++.+|++.||++|||+.|+++ ++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 230 RSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293 (372)
T ss_pred HHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence 0 000 00 00001112457889999999999999999999987 4544
No 125
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=6.4e-35 Score=318.33 Aligned_cols=253 Identities=27% Similarity=0.441 Sum_probs=202.9
Q ss_pred cCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEecc
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
++|++.+.||+|++|.||+|...++..+|+|++.... ...+.+.+|++++++++|||++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 4588889999999999999998877789999876543 23456889999999999999999998875 456789999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+|+|.++++.. ....+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||.++........
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05069 84 KGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence 99999999753 234578999999999999999999986 9999999999999999999999999999876433222
Q ss_pred eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 931 VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......++..|+|||...+..++.++||||||+++|||++ |+.||.... ..+...+... ....
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~---~~~~~~~~~~----~~~~--------- 222 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV---NREVLEQVER----GYRM--------- 222 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHHc----CCCC---------
Confidence 2222346678999999988889999999999999999999 999986422 2222222111 1000
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
..+...+..+.+++.+|++++|++||+++++++.|++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0111233578999999999999999999999999986
No 126
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=5.6e-35 Score=316.81 Aligned_cols=247 Identities=26% Similarity=0.375 Sum_probs=198.4
Q ss_pred CeEcccCceEEEEEEECCCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCChh
Q 001561 777 NIIGCGGFGLVYKATLTNGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSLD 855 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 855 (1052)
++||+|+||.||+|...++..||+|.+.... ......+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 3699999999999998888999999987654 333456889999999999999999999999999999999999999999
Q ss_pred hhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeeeecc
Q 001561 856 YWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTDL 935 (1052)
Q Consensus 856 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 935 (1052)
+++... ...+++..+..++.|++.|+.|+|+. +++||||||+||++++++.+|++|||++..............
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (250)
T cd05085 81 SFLRKK---KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154 (250)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCC
Confidence 988653 34578999999999999999999986 999999999999999999999999999976433222112223
Q ss_pred cccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHH
Q 001561 936 VGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREK 1014 (1052)
Q Consensus 936 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1052)
.+++.|+|||+..+..++.++||||||+++||+++ |..||.... .......+. ...... ....
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~---~~~~~~~~~----~~~~~~---------~~~~ 218 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMT---NQQAREQVE----KGYRMS---------CPQK 218 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCC---HHHHHHHHH----cCCCCC---------CCCC
Confidence 44668999999988889999999999999999998 999996432 111111111 110000 0111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 1015 QLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 1015 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
.+..+.+++.+|++.+|++||++.|++++|.
T Consensus 219 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 219 CPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 2347899999999999999999999999875
No 127
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.3e-35 Score=327.92 Aligned_cols=260 Identities=27% Similarity=0.425 Sum_probs=206.6
Q ss_pred hcCCcccCeEcccCceEEEEEEECC------CcEEEEEEecCCc-hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCe
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTN------GTKAAVKRLSGDC-GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGND 841 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 841 (1052)
.++|+..+.||+|+||.||+|.... ...+|+|.+.... .....++.+|+++++++ +|+||+++++++.+++.
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 4568889999999999999998642 3679999987543 33445688999999999 89999999999999999
Q ss_pred EEEEEEeccCCChhhhhhccc------------CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC
Q 001561 842 RLLIYSYMENGSLDYWLHESV------------DKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE 909 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~ 909 (1052)
.++||||+++|+|.++++... .....+++..++.++.|++.|++|||+. +|+||||||+||++++
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcC
Confidence 999999999999999987532 2345689999999999999999999986 9999999999999999
Q ss_pred CCCeEEeecccccccCCCCCee-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHH
Q 001561 910 KFEAHLADFGLSRLLRPYDTHV-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLV 987 (1052)
Q Consensus 910 ~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~ 987 (1052)
++.+|++|||.++.+....... .....++..|+|||+..+..++.++|||||||++||+++ |..||.... ..+..
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~---~~~~~ 244 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP---VEELF 244 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC---HHHHH
Confidence 9999999999998765432211 122345678999999988899999999999999999998 999986322 11222
Q ss_pred HHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 988 SWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
... ....... .+......+.+++.+|++.+|++|||+.|+++.|+++.
T Consensus 245 ~~~----~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 245 KLL----KEGYRME---------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHH----HcCCcCC---------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111 1111000 11122346889999999999999999999999999874
No 128
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.9e-35 Score=324.36 Aligned_cols=257 Identities=27% Similarity=0.426 Sum_probs=203.1
Q ss_pred cCCcccCeEcccCceEEEEEEE-----CCCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATL-----TNGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
.+|++.+.||+|+||+||+|.+ .++..||+|.+.... .....++.+|++++++++||||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 3577889999999999999974 245789999987533 3344678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcccC-------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCC
Q 001561 845 IYSYMENGSLDYWLHESVD-------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKF 911 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~ 911 (1052)
||||+++++|.+++..... ....+++.++..++.|++.|++|||+. +|+||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 9999999999999853211 123578899999999999999999986 999999999999999999
Q ss_pred CeEEeecccccccCCCCC-eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHH
Q 001561 912 EAHLADFGLSRLLRPYDT-HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSW 989 (1052)
Q Consensus 912 ~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~ 989 (1052)
.+|++|||+++....... .......++..|+|||+..+..++.++||||||+++|||++ |..||.... ..+..+.
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~---~~~~~~~ 238 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS---NQEVIEM 238 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC---HHHHHHH
Confidence 999999999987543221 12233456778999999988889999999999999999998 999986321 1122221
Q ss_pred HHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 990 VFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
+. ...... .+.....++.+++.+|++.+|++||++.++.+.|..
T Consensus 239 ~~----~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 239 VR----KRQLLP---------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HH----cCCcCC---------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11 111100 111123468899999999999999999999998864
No 129
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.5e-35 Score=330.40 Aligned_cols=243 Identities=22% Similarity=0.354 Sum_probs=191.1
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
++||+|+||.||+|... +++.||+|++.... ....+.+..|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 67899999987542 23345577888888877 799999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|..++.. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~ 152 (329)
T cd05618 81 GDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DT 152 (329)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-Cc
Confidence 999888764 34689999999999999999999986 99999999999999999999999999997543221 22
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCC--chhHHHHHHHhhhcccccccccccccc
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKN--CRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......+......... ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~-------- 223 (329)
T cd05618 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IR-------- 223 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC-CC--------
Confidence 234579999999999999999999999999999999999999996322111 1111222222111111 01
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFI 1037 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1037 (1052)
.+.....++.+++.+|++.||++||++
T Consensus 224 -~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 224 -IPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred -CCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 111223467899999999999999984
No 130
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=4.2e-35 Score=330.78 Aligned_cols=248 Identities=21% Similarity=0.341 Sum_probs=195.2
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
++||+|+||.||+|... +++.||+|+++... ....+.+.+|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999865 68899999997542 22334578899999998 799999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~ 152 (329)
T cd05588 81 GDLMFHMQR----QRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDT 152 (329)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccC-CCc
Confidence 999888764 34689999999999999999999986 9999999999999999999999999999753221 122
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCC--chhHHHHHHHhhhcccccccccccccc
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKN--CRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||+.....+ ......+.......... .+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------- 224 (329)
T cd05588 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI-RI------- 224 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC-CC-------
Confidence 334679999999999999999999999999999999999999996432111 11111222221111110 00
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCC------HHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPF------IEEVVT 1042 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl~ 1042 (1052)
+.....++.+++.+|++.||.+||+ +.|+++
T Consensus 225 --p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 225 --PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred --CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 1112346889999999999999997 667764
No 131
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=4.4e-35 Score=352.83 Aligned_cols=260 Identities=24% Similarity=0.341 Sum_probs=203.5
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||.||+|... +|+.||+|++.... ....+++.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999865 68999999987542 234567899999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccC-------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecc
Q 001561 847 SYMENGSLDYWLHESVD-------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFG 919 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG 919 (1052)
||++||+|.+++..... .....++..++.++.|+++||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 99999999998865321 123456788899999999999999986 99999999999999999999999999
Q ss_pred cccccCCCCC-----------------eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCC
Q 001561 920 LSRLLRPYDT-----------------HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKN 982 (1052)
Q Consensus 920 ~a~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~ 982 (1052)
+++....... ......+||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~-- 236 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG-- 236 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch--
Confidence 9987621110 011234799999999999999999999999999999999999999964221
Q ss_pred chhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhhc
Q 001561 983 CRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRP-FIEEVVTWLDGI 1047 (1052)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i 1047 (1052)
...... ... .++... ......+..+.+++.+|++.||++|| +++++.+.|+..
T Consensus 237 -~ki~~~-~~i---------~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 237 -RKISYR-DVI---------LSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred -hhhhhh-hhc---------cChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111100 000 000000 00112334688999999999999996 667777777665
No 132
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.5e-35 Score=330.08 Aligned_cols=244 Identities=25% Similarity=0.349 Sum_probs=192.7
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHH---HhcCCCceeeeeceEeeCCeEEEE
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEAL---SRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
|++.+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++ ++++||||+++++++.+++..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 667889999999999999865 68999999987542 12234466666554 566899999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+++|+|..+++. ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 81 ~E~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIHT-----DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 999999999887753 3589999999999999999999986 99999999999999999999999999987543
Q ss_pred CCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
... ......+|++.|+|||++.+..++.++|||||||++|||++|+.||... +..+....+. .... .
T Consensus 153 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~---~~~~~~~~i~---~~~~--~---- 219 (324)
T cd05589 153 GFG-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD---DEEEVFDSIV---NDEV--R---- 219 (324)
T ss_pred CCC-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC---CHHHHHHHHH---hCCC--C----
Confidence 222 2233467999999999999889999999999999999999999999632 2222221111 1100 0
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRP-----FIEEVVT 1042 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1042 (1052)
.+......+.+++.+|++.||.+|| ++.++++
T Consensus 220 -----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 220 -----YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -----CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 0111234678999999999999999 4666655
No 133
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1e-34 Score=320.45 Aligned_cols=262 Identities=23% Similarity=0.389 Sum_probs=209.3
Q ss_pred hcCCcccCeEcccCceEEEEEEECC-----CcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEee-CCeE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTN-----GTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRH-GNDR 842 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 842 (1052)
.++|++.++||+|+||.||+|.+.+ +..||+|++.... ....+.+.+|+.++++++||||+++++++.+ +...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678899999999999999998765 6789999887543 3345668899999999999999999998776 4678
Q ss_pred EEEEEeccCCChhhhhhcccCC----ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeec
Q 001561 843 LLIYSYMENGSLDYWLHESVDK----DSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADF 918 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~Df 918 (1052)
++++||+++|+|.+++...... ...+++..++.++.|++.|++|||+. +++||||||+||++++++.+|++||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999998764322 25689999999999999999999986 9999999999999999999999999
Q ss_pred ccccccCCCCCeee-ecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhc
Q 001561 919 GLSRLLRPYDTHVT-TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSE 996 (1052)
Q Consensus 919 G~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~ 996 (1052)
|+++.+........ ....++..|+|||+..+..++.++||||||+++||+++ |+.||... ...+...+... .
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~---~~~~~~~~~~~---~ 235 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI---DPFEMAAYLKD---G 235 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC---CHHHHHHHHHc---C
Confidence 99987644332222 22345678999999988889999999999999999999 99999632 22222222211 1
Q ss_pred ccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCcc
Q 001561 997 KREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGID 1050 (1052)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1050 (1052)
.... .....+.++.+++.+|++.+|++||++.|+++.|+++..+
T Consensus 236 ~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 236 YRLA----------QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred CCCC----------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 0000 0111234688999999999999999999999999988654
No 134
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=5.4e-35 Score=324.42 Aligned_cols=259 Identities=29% Similarity=0.425 Sum_probs=204.7
Q ss_pred CCcccCeEcccCceEEEEEEEC------CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT------NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
+|++.+.||+|+||.||+|... ....+|+|.+.... .....++.+|+.++++++||||+++++.+.+.+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999753 23578888887544 2334678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcccC--------------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCc
Q 001561 845 IYSYMENGSLDYWLHESVD--------------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSN 904 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~N 904 (1052)
|+||+++|+|.+++..... ....+++..++.++.|++.|++|||+. +|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 9999999999998865321 224588999999999999999999986 99999999999
Q ss_pred eEECCCCCeEEeecccccccCCCCCee-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCC
Q 001561 905 ILLDEKFEAHLADFGLSRLLRPYDTHV-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKN 982 (1052)
Q Consensus 905 ill~~~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~ 982 (1052)
|++++++.+||+|||+++......... .....++..|+|||...+..++.++||||||+++|||++ |+.||... .
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~---~ 234 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI---A 234 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC---C
Confidence 999999999999999998654332211 122345678999999888889999999999999999998 99998632 2
Q ss_pred chhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 983 CRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
.....+... ..... ........++.+++.+|++.+|++||+++|+++.|+++-.
T Consensus 235 ~~~~~~~~~----~~~~~---------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 235 PERLFNLLK----TGYRM---------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHHHHHHh----CCCCC---------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 222222211 11000 0011223478899999999999999999999999998743
No 135
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.1e-35 Score=329.50 Aligned_cols=236 Identities=26% Similarity=0.349 Sum_probs=190.1
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
++||+|+||+||+|... +++.||+|++.... ....+.+..|.+++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 68899999987542 22334567788888877 699999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~-~~~ 152 (320)
T cd05590 81 GDLMFHIQK----SRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN-GKT 152 (320)
T ss_pred chHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC-CCc
Confidence 999988864 34588999999999999999999986 9999999999999999999999999998764322 222
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+....+. ... ...+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~---~~~~~~~~i~---~~~----~~~~------ 216 (320)
T cd05590 153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE---NEDDLFEAIL---NDE----VVYP------ 216 (320)
T ss_pred ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC---CHHHHHHHHh---cCC----CCCC------
Confidence 33457999999999999889999999999999999999999999642 2222222221 110 0001
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCH
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRPFI 1037 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RPs~ 1037 (1052)
.....++.+++.+|++.||++||++
T Consensus 217 -~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 217 -TWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred -CCCCHHHHHHHHHHcccCHHHCCCC
Confidence 1123468899999999999999998
No 136
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.5e-35 Score=336.59 Aligned_cols=251 Identities=24% Similarity=0.293 Sum_probs=196.5
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36889999999999999999865 78999999986432 223356788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 81 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 81 EFLPGGDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999998864 34588999999999999999999986 999999999999999999999999999964321
Q ss_pred CCCe----------------------------------------------eeecccccccccCccccCCcCCCcccchHH
Q 001561 927 YDTH----------------------------------------------VTTDLVGTLGYIPPEYSQTLTATCRGDVYS 960 (1052)
Q Consensus 927 ~~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws 960 (1052)
.... .....+||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 1000 001246999999999999889999999999
Q ss_pred HHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCC---CCH
Q 001561 961 FGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRR---PFI 1037 (1052)
Q Consensus 961 lGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~ 1037 (1052)
|||++|||++|++||.... ..+....+.. ........+ ......++.+++.+|+. +|.+| +++
T Consensus 234 lGvil~elltG~~Pf~~~~---~~~~~~~i~~---~~~~~~~p~-------~~~~s~~~~dli~~lL~-~~~~r~~r~~~ 299 (377)
T cd05629 234 LGAIMFECLIGWPPFCSEN---SHETYRKIIN---WRETLYFPD-------DIHLSVEAEDLIRRLIT-NAENRLGRGGA 299 (377)
T ss_pred cchhhhhhhcCCCCCCCCC---HHHHHHHHHc---cCCccCCCC-------CCCCCHHHHHHHHHHhc-CHhhcCCCCCH
Confidence 9999999999999996422 1121111111 000111111 01123468899999997 67765 599
Q ss_pred HHHHH
Q 001561 1038 EEVVT 1042 (1052)
Q Consensus 1038 ~evl~ 1042 (1052)
.|+++
T Consensus 300 ~~~l~ 304 (377)
T cd05629 300 HEIKS 304 (377)
T ss_pred HHHhc
Confidence 99887
No 137
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=5.7e-35 Score=327.72 Aligned_cols=240 Identities=25% Similarity=0.338 Sum_probs=189.4
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
++||+|+||.||+|... +++.||+|+++... ....+.+..|.+++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 67889999987542 12233455666776654 899999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~ 152 (316)
T cd05592 81 GDLMFHIQS----SGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GK 152 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Cc
Confidence 999988864 34588999999999999999999986 99999999999999999999999999997643222 22
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+ ..... ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~---~~~~~~~i---~~~~~-----------~~ 215 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED---EDELFDSI---LNDRP-----------HF 215 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC---HHHHHHHH---HcCCC-----------CC
Confidence 334579999999999998889999999999999999999999996422 12222111 11100 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRPFIE-EVV 1041 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 1041 (1052)
+.....++.+++.+|++.+|++||++. +++
T Consensus 216 ~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 216 PRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 111234678999999999999999876 443
No 138
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.1e-34 Score=317.68 Aligned_cols=250 Identities=26% Similarity=0.400 Sum_probs=197.8
Q ss_pred cCCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 771 NNFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
++|+..++||+|+||.||+|.. .++..||+|++.... ....+++.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3678889999999999999985 478899999986543 34456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
++++++..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~- 148 (279)
T cd06619 81 MDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS- 148 (279)
T ss_pred CCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-
Confidence 9999986542 367888999999999999999986 9999999999999999999999999999765432
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
......|++.|+|||++.+..++.++||||||+++|+|++|+.||.......................... .
T Consensus 149 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----~- 220 (279)
T cd06619 149 --IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV-----L- 220 (279)
T ss_pred --cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCC-----C-
Confidence 22335789999999999988899999999999999999999999964322211110000011110000000 0
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.......++.+++.+|++.+|++||+++|+++
T Consensus 221 --~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 221 --PVGQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred --CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 01112336889999999999999999999986
No 139
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.9e-34 Score=318.04 Aligned_cols=257 Identities=23% Similarity=0.374 Sum_probs=201.0
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCc----EEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGT----KAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
++|++.+.||+|+||+||+|.+. +++ +|++|.+.... .....++..|+.+++++.||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 46888899999999999999864 444 47788775433 2334567888889999999999999998764 45788
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
++||+++|+|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||.++..
T Consensus 86 i~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 86 VTQLSPLGSLLDHVRQH---RDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEEeCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 99999999999999752 34689999999999999999999986 9999999999999999999999999999876
Q ss_pred CCCCCee-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccc
Q 001561 925 RPYDTHV-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI 1002 (1052)
Q Consensus 925 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
....... .....++..|+|||...+..++.++||||||+++||+++ |+.||..... ....+. .. ... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---~~~~~~-~~---~~~--~~ 230 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP---HEVPDL-LE---KGE--RL 230 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHH-HH---CCC--cC
Confidence 4332221 223456779999999988889999999999999999998 9999964321 111111 11 111 00
Q ss_pred ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCcc
Q 001561 1003 IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGID 1050 (1052)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1050 (1052)
..+.. +...+.+++.+|+..+|++||++.|+++.|+.+..+
T Consensus 231 ~~~~~-------~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 231 AQPQI-------CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred CCCCC-------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 11111 123578899999999999999999999999887654
No 140
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6e-35 Score=329.09 Aligned_cols=241 Identities=25% Similarity=0.319 Sum_probs=193.0
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCC-ceeeeeceEeeCCeEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHK-NLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ 846 (1052)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+..|.+++..++|+ +|+++++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788999999999999999866 57899999987542 22345677899999999764 6888999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 81 EYVNGGDLMYHIQQ----VGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 99999999988864 34578999999999999999999986 999999999999999999999999999875322
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||... ...+....+.. .. ..
T Consensus 154 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~---~~~~~~~~i~~---~~--~~----- 219 (324)
T cd05587 154 G-GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE---DEDELFQSIME---HN--VS----- 219 (324)
T ss_pred C-CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC---CHHHHHHHHHc---CC--CC-----
Confidence 1 12233457999999999999989999999999999999999999999632 22222222111 10 00
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFI 1037 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1037 (1052)
.+.....++.+++.+|++++|.+|++.
T Consensus 220 ----~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 220 ----YPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ----CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 011123468899999999999999976
No 141
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=8.8e-35 Score=319.73 Aligned_cols=256 Identities=27% Similarity=0.420 Sum_probs=201.9
Q ss_pred CcccCeEcccCceEEEEEEEC-C---CcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCe-----
Q 001561 773 FNQANIIGCGGFGLVYKATLT-N---GTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGND----- 841 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~---g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 841 (1052)
|++.+.||+|+||.||+|... + +..||+|+++.+. .....++.+|++.++.++||||+++++++.+.+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567889999999999999864 2 3679999987543 2334678999999999999999999998876554
Q ss_pred -EEEEEEeccCCChhhhhhcccC--CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeec
Q 001561 842 -RLLIYSYMENGSLDYWLHESVD--KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADF 918 (1052)
Q Consensus 842 -~~lv~e~~~~g~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~Df 918 (1052)
.++|+||+++|+|..++..... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 7899999999999998865431 234689999999999999999999986 9999999999999999999999999
Q ss_pred ccccccCCCCCeee-ecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhc
Q 001561 919 GLSRLLRPYDTHVT-TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSE 996 (1052)
Q Consensus 919 G~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~ 996 (1052)
|.++.+........ ....++..|+|||+..+..++.++||||||+++|||++ |..||.... ..+...+...
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~---~~~~~~~~~~---- 230 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE---NHEIYDYLRH---- 230 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHHc----
Confidence 99987643322211 11235678999999988889999999999999999999 999986422 2222222211
Q ss_pred ccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 997 KREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
..... .+.....++.+++.+|++.||++||++.|+++.|+++
T Consensus 231 ~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 GNRLK---------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCC---------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11000 1112344789999999999999999999999999876
No 142
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.8e-35 Score=327.22 Aligned_cols=267 Identities=22% Similarity=0.367 Sum_probs=202.0
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
++|++.+.||+|+||.||+|+.. +++.||+|+++... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56889999999999999999865 67889999987443 22334577899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++ ++.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 86 LDK-DLKQYMDDC---GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 975 777777542 34578899999999999999999986 99999999999999999999999999997643322
Q ss_pred CeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccc---ccc--
Q 001561 929 THVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKRE---VEI-- 1002 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~-- 1002 (1052)
.......+|+.|+|||++.+ ..++.++||||+|+++|||++|++||..... .+....+......... ..+
T Consensus 159 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07872 159 -KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTV---EDELHLIFRLLGTPTEETWPGISS 234 (309)
T ss_pred -cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHhCCCCHHHHhhhcc
Confidence 12233468899999997754 5688999999999999999999999964321 2222211111110000 000
Q ss_pred ----cc---ccc----cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcC
Q 001561 1003 ----ID---ASI----WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIG 1048 (1052)
Q Consensus 1003 ----~~---~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~ 1048 (1052)
.+ +.. ..........++.+++.+|++.||++|||+.|+++ +++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 235 NDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 00 000 00001123446789999999999999999999998 666654
No 143
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.6e-35 Score=330.14 Aligned_cols=242 Identities=23% Similarity=0.317 Sum_probs=194.4
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENG 852 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 852 (1052)
+.||+|+||.||+|... +|..||+|++.... ......+..|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 78999999987542 223355678999999999999999999999999999999999999
Q ss_pred ChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeee
Q 001561 853 SLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVT 932 (1052)
Q Consensus 853 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 932 (1052)
+|.+++.. ...+++..+..++.|++.||+|||+. ++|+||||||+||++++++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~ 153 (325)
T cd05594 81 ELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-ATM 153 (325)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-ccc
Confidence 99888864 34689999999999999999999972 499999999999999999999999999987543222 222
Q ss_pred ecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhh
Q 001561 933 TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDR 1012 (1052)
Q Consensus 933 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1012 (1052)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+. ... .. .+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~---~~~~~~~i~---~~~--~~---------~p 216 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HEKLFELIL---MEE--IR---------FP 216 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC---HHHHHHHHh---cCC--CC---------CC
Confidence 34579999999999998899999999999999999999999996322 111111111 000 00 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001561 1013 EKQLLEMLEIACKCIDQDPRRRP-----FIEEVVT 1042 (1052)
Q Consensus 1013 ~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1042 (1052)
.....++.+++.+|++.||++|+ ++.++++
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 217 RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 11234688999999999999996 8999875
No 144
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=7.9e-35 Score=317.03 Aligned_cols=246 Identities=24% Similarity=0.396 Sum_probs=196.1
Q ss_pred eEcccCceEEEEEEEC---CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCC
Q 001561 778 IIGCGGFGLVYKATLT---NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENG 852 (1052)
Q Consensus 778 ~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 852 (1052)
.||+|+||.||+|.++ ++..+|+|+++... ....+++..|+.++++++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999753 57889999986443 334567899999999999999999999885 45678999999999
Q ss_pred ChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeee
Q 001561 853 SLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVT 932 (1052)
Q Consensus 853 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 932 (1052)
+|.+++.. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||.++..........
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQK----NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999864 34588999999999999999999986 999999999999999999999999999987654433221
Q ss_pred --ecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 933 --TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 933 --~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
....+++.|+|||......++.++||||||+++|||++ |+.||.... ..+....+. .......
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~---~~~~~~~i~----~~~~~~~------- 219 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK---GNEVTQMIE----SGERMEC------- 219 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHH----CCCCCCC-------
Confidence 12234578999999888889999999999999999998 999996422 122222111 1111111
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
+...+.++.+++.+|++.||++||++++|++.|++.
T Consensus 220 --~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 220 --PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred --CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 112334788999999999999999999999999864
No 145
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8.4e-35 Score=318.78 Aligned_cols=253 Identities=25% Similarity=0.358 Sum_probs=200.8
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
++|++.+.||+|+||.||+|... +++.||+|++..........+.+|+.++++++||||+++++++..++..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 47899999999999999999864 78899999987655445566889999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.++++. ...+++..+..++.|++.|++|||+. +|+|||+||+||+++.++.++|+|||++........
T Consensus 89 ~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06646 89 GGGSLQDIYHV----TGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA 161 (267)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence 99999998864 34678999999999999999999986 999999999999999999999999999987643221
Q ss_pred eeeecccccccccCccccC---CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQ---TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
......|++.|+|||.+. ...++.++|||||||++|||++|+.||....... .. ...... ....+.
T Consensus 162 -~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~--~~----~~~~~~----~~~~~~ 230 (267)
T cd06646 162 -KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR--AL----FLMSKS----NFQPPK 230 (267)
T ss_pred -ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh--hh----eeeecC----CCCCCC
Confidence 123356889999999874 4457889999999999999999999985322110 00 000000 000000
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTW 1043 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1043 (1052)
. ......+..+.+++.+|++.+|++||+++++++.
T Consensus 231 ~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 231 L--KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred C--ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 0 0011234578999999999999999999999864
No 146
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.3e-35 Score=336.55 Aligned_cols=260 Identities=25% Similarity=0.375 Sum_probs=203.6
Q ss_pred hcCCcccCeEcccCceEEEEEEEC------CCcEEEEEEecCCch-hhHHHHHHHHHHHHhcC-CCceeeeeceEeeCCe
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT------NGTKAAVKRLSGDCG-QMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGND 841 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 841 (1052)
.++|.+.+.||+|+||.||+|++. .+..||+|++..... ...+.+.+|++++.++. ||||++++++|...+.
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 345778899999999999999864 245799999975532 22346889999999997 9999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcccC----------------------------------------------------------
Q 001561 842 RLLIYSYMENGSLDYWLHESVD---------------------------------------------------------- 863 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------------------- 863 (1052)
.++||||+++|+|.++++....
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 9999999999999999975321
Q ss_pred ------------------------------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEE
Q 001561 864 ------------------------------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILL 907 (1052)
Q Consensus 864 ------------------------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill 907 (1052)
....+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEE
Confidence 112467888999999999999999985 99999999999999
Q ss_pred CCCCCeEEeecccccccCCCCC-eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchh
Q 001561 908 DEKFEAHLADFGLSRLLRPYDT-HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRD 985 (1052)
Q Consensus 908 ~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~ 985 (1052)
++++.+|++|||+++....... .......+++.|+|||.+....++.++||||||+++|||++ |..||.... ..+
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~---~~~ 349 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP---MNE 349 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC---chH
Confidence 9999999999999986533221 11223457789999999988889999999999999999998 899986322 111
Q ss_pred HHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 986 LVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
..... ....... . .+.....++.+++.+|++.+|.+||+++|+++.|+++
T Consensus 350 ~~~~~---~~~~~~~--~-------~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 350 QFYNA---IKRGYRM--A-------KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HHHHH---HHcCCCC--C-------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11111 1111000 0 0111234789999999999999999999999999875
No 147
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=7e-35 Score=328.39 Aligned_cols=241 Identities=25% Similarity=0.305 Sum_probs=193.3
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
+|++.+.||+|+||+||+|... +++.||+|++.+... ...+.+..|..++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788999999999999999866 578999999875432 2234466788888777 5899999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 81 EYVNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred cCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 99999999988864 34588999999999999999999986 999999999999999999999999999975432
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+....+.. ... .
T Consensus 154 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~---~~~~~~~~i~~---~~~--~----- 219 (323)
T cd05616 154 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE---DEDELFQSIME---HNV--A----- 219 (323)
T ss_pred C-CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCC---CHHHHHHHHHh---CCC--C-----
Confidence 2 12233457999999999999999999999999999999999999999642 22222222211 100 0
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFI 1037 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1037 (1052)
.+.....++.+++.+|++.+|.+|++.
T Consensus 220 ----~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 220 ----YPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ----CCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 011223468899999999999999985
No 148
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=9.4e-35 Score=320.57 Aligned_cols=259 Identities=25% Similarity=0.403 Sum_probs=204.8
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCc----EEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGT----KAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRL 843 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 843 (1052)
..+|+..+.||+|+||+||+|.+. +|+ +||+|++.... ....+++.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 356888999999999999999854 444 48999987543 34456788999999999999999999998754 578
Q ss_pred EEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccc
Q 001561 844 LIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRL 923 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~ 923 (1052)
+++||+++|+|.++++.. ...+++..++.++.|+++|++|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 85 l~~~~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 85 LVTQLMPYGCLLDYVREN---KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEcCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceee
Confidence 999999999999998752 34689999999999999999999986 999999999999999999999999999987
Q ss_pred cCCCCCeee-ecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccc
Q 001561 924 LRPYDTHVT-TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVE 1001 (1052)
Q Consensus 924 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1052)
......... ....+++.|+|||...+..++.++||||||+++|||++ |..||... .......++.... . ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~---~~~~~~~~~~~~~---~-~~ 231 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGI---PAREIPDLLEKGE---R-LP 231 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---CHHHHHHHHHCCC---c-CC
Confidence 654332211 12245678999999988889999999999999999998 99998632 1222222211100 0 00
Q ss_pred cccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCccc
Q 001561 1002 IIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGIDA 1051 (1052)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1051 (1052)
........+.+++.+|++.||++||++.|+++.|+++..++
T Consensus 232 ---------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 232 ---------QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ---------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 01122346889999999999999999999999999886653
No 149
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.1e-34 Score=314.48 Aligned_cols=255 Identities=28% Similarity=0.464 Sum_probs=207.1
Q ss_pred hcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.++|++.+.||+|+||.||+|...++..||+|.+.... ...+++.+|+.++++++|+||+++++++.+....++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 46789999999999999999998878899999987543 23467899999999999999999999999888999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++... ....+++..+..++.+++.|++|||+. +++|+||||+||++++++.+|++|||.++.......
T Consensus 84 ~~~~L~~~i~~~--~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 84 SKGSLLDFLKSG--EGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred CCCCHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 999999999763 234689999999999999999999986 999999999999999999999999999987653221
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.......++..|+|||...+..++.++||||+|+++||+++ |+.||... +.......+..... .
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~---~~~~~~~~~~~~~~------~------ 223 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM---TNREVLEQVERGYR------M------ 223 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC---CHHHHHHHHHcCCC------C------
Confidence 11122234568999999988889999999999999999998 99999532 22222222211100 0
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
..+...+.++.+++.+|++.+|++||+++++.+.|++
T Consensus 224 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 224 -PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 0001113468999999999999999999999999986
No 150
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.1e-35 Score=336.93 Aligned_cols=250 Identities=24% Similarity=0.291 Sum_probs=195.6
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
+|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6899999999999999999865 68899999986432 1223557889999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|..+...
T Consensus 82 ~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 82 YIPGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 9999999999874 34578899999999999999999986 9999999999999999999999999998533110
Q ss_pred C------------------------------------------CeeeecccccccccCccccCCcCCCcccchHHHHHHH
Q 001561 928 D------------------------------------------THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVL 965 (1052)
Q Consensus 928 ~------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil 965 (1052)
. .......+||+.|+|||++.+..++.++|||||||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 0 0001234799999999999999999999999999999
Q ss_pred HHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCC---CHHHHHH
Q 001561 966 LELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRP---FIEEVVT 1042 (1052)
Q Consensus 966 ~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~evl~ 1042 (1052)
|||++|+.||..... .+... ............. ......++.+++.+|+ .+|.+|+ ++.|+++
T Consensus 235 yell~G~~Pf~~~~~---~~~~~---~i~~~~~~~~~~~-------~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 235 YEMLVGQPPFLADTP---AETQL---KVINWETTLHIPS-------QAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred eehhhCCCCCCCCCH---HHHHH---HHhccCccccCCC-------CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 999999999964321 11111 1111000011100 1112335678888876 5999999 8899876
No 151
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=9.1e-35 Score=317.05 Aligned_cols=252 Identities=35% Similarity=0.497 Sum_probs=201.4
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHH--HHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMER--EFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
|++.+.||+|+||+||+|+.. +++.||+|++......... ...+|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 677899999999999999876 5678999999876543332 3456999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++. ....+++..+..++.|+++||+|||+. +|+||||||+||++++++.++|+|||.+.... ...
T Consensus 81 ~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~ 152 (260)
T PF00069_consen 81 PGGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENN 152 (260)
T ss_dssp TTEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST-STT
T ss_pred cccccccccc----ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc-ccc
Confidence 9999999997 345689999999999999999999996 99999999999999999999999999997642 223
Q ss_pred eeeecccccccccCccccC-CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQ-TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.......+++.|+|||+.. +..++.++||||+|+++|+|++|+.||.... ..+..................
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~----- 224 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESN---SDDQLEIIEKILKRPLPSSSQ----- 224 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS---HHHHHHHHHHHHHTHHHHHTT-----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc---chhhhhhhhhccccccccccc-----
Confidence 3445568899999999988 8889999999999999999999999997431 111111111111110000000
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
. ......++.+++.+|++.||++||++.++++
T Consensus 225 ~--~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 225 Q--SREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp S--HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred c--cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 0000157999999999999999999999975
No 152
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=9.9e-35 Score=332.49 Aligned_cols=259 Identities=24% Similarity=0.268 Sum_probs=201.0
Q ss_pred HHHHHHhhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEee
Q 001561 763 VSDLLKSTNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRH 838 (1052)
Q Consensus 763 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 838 (1052)
+.++....++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4445555688999999999999999999876 67899999986422 2233457889999999999999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeec
Q 001561 839 GNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADF 918 (1052)
Q Consensus 839 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~Df 918 (1052)
++..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~Df 186 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 186 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeC
Confidence 9999999999999999998864 2478888999999999999999986 9999999999999999999999999
Q ss_pred ccccccCCCCCeeeecccccccccCccccCCc----CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhh
Q 001561 919 GLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTL----TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMK 994 (1052)
Q Consensus 919 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~ 994 (1052)
|+++.............+||+.|+|||++... .++.++|||||||++|||++|+.||... +.......+ .
T Consensus 187 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~---~~~~~~~~i---~ 260 (371)
T cd05622 187 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD---SLVGTYSKI---M 260 (371)
T ss_pred CceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC---CHHHHHHHH---H
Confidence 99987654332233456799999999987653 3788999999999999999999999632 111111111 1
Q ss_pred hcccccccccccccchhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 001561 995 SEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRR--RPFIEEVVT 1042 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 1042 (1052)
.......+.+ .......+.+++.+|+..++.+ ||++.|+++
T Consensus 261 ~~~~~~~~~~-------~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 261 NHKNSLTFPD-------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 303 (371)
T ss_pred cCCCcccCCC-------cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhc
Confidence 1111111111 1123346789999999844433 779998887
No 153
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.1e-34 Score=315.74 Aligned_cols=251 Identities=29% Similarity=0.458 Sum_probs=205.6
Q ss_pred hcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.++|++.+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 356888999999999999999875 88999999986644 4567899999999999999999999999889999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++... ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~ 157 (256)
T cd05039 83 AKGSLVDYLRSR--GRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD 157 (256)
T ss_pred CCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc
Confidence 999999998753 223689999999999999999999986 999999999999999999999999999987632211
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
...++..|+|||.+....++.++||||||+++||+++ |+.||... ...+...... ......
T Consensus 158 ----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~---~~~~~~~~~~----~~~~~~------- 219 (256)
T cd05039 158 ----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI---PLKDVVPHVE----KGYRME------- 219 (256)
T ss_pred ----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC---CHHHHHHHHh----cCCCCC-------
Confidence 2344568999999988889999999999999999997 99998632 2222221111 110000
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
.+...+.++.+++.+|+..+|++||++.|++++|+++
T Consensus 220 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 220 --APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred --CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0112235788999999999999999999999999864
No 154
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3e-34 Score=313.67 Aligned_cols=250 Identities=26% Similarity=0.375 Sum_probs=200.7
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-----hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-----GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
++|++.+.||+|++|.||+|... ++.+||+|.+.... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46889999999999999999864 68999999886432 1123467889999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
|+||+++++|.+++.. ...+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++|+|||.++..
T Consensus 82 v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 82 FMEYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 9999999999998864 34578899999999999999999986 9999999999999999999999999999865
Q ss_pred CCCCCeee--ecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccc
Q 001561 925 RPYDTHVT--TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI 1002 (1052)
Q Consensus 925 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
........ ....|+..|+|||+..+..++.++||||+|+++|||++|+.||... +......+ ........
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~---~~~~~~~~---~~~~~~~~-- 226 (263)
T cd06625 155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEF---EAMAAIFK---IATQPTNP-- 226 (263)
T ss_pred cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcccc---chHHHHHH---HhccCCCC--
Confidence 43221111 2346788999999999888999999999999999999999998532 11111111 11111100
Q ss_pred ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1003 IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..+......+.+++.+|++.+|.+||++.|+++
T Consensus 227 -------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 227 -------QLPSHVSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred -------CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 111223346889999999999999999999986
No 155
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1e-34 Score=326.74 Aligned_cols=241 Identities=25% Similarity=0.348 Sum_probs=193.1
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
++||+|+||.||+|+.. +++.||+|++.... ....+.+..|.+++..+ +||||+++++++.+++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999875 57899999987542 22334567788888876 799999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|..++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~ 152 (321)
T cd05591 81 GDLMFQIQR----SRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VT 152 (321)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC-cc
Confidence 999988864 34588999999999999999999986 99999999999999999999999999997643222 22
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||... +..+....+.. .. ...+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~---~~~~~~~~i~~---~~----~~~p------ 216 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEAD---NEDDLFESILH---DD----VLYP------ 216 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCC---CHHHHHHHHHc---CC----CCCC------
Confidence 33457999999999999889999999999999999999999999642 22222222211 10 0000
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC-------CHHHHHH
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRP-------FIEEVVT 1042 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RP-------s~~evl~ 1042 (1052)
.....++.+++.+|++.||++|| ++.++++
T Consensus 217 -~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 217 -VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred -CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 11224688999999999999999 7777764
No 156
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.1e-34 Score=320.64 Aligned_cols=264 Identities=23% Similarity=0.354 Sum_probs=203.0
Q ss_pred cCCcccCeEcccCceEEEEEEEC-----------------CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeee
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-----------------NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSL 832 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-----------------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l 832 (1052)
++|++.+.||+|+||.||+|... ++..||+|++.... .....++.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56899999999999999998533 23468999987543 3345678999999999999999999
Q ss_pred eceEeeCCeEEEEEEeccCCChhhhhhcccCC-------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCce
Q 001561 833 QGYCRHGNDRLLIYSYMENGSLDYWLHESVDK-------DSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNI 905 (1052)
Q Consensus 833 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Ni 905 (1052)
++++..++..++||||+++|+|.+++...... ...+++..++.++.|++.|++|||+. +++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence 99999999999999999999999998764321 23478889999999999999999986 999999999999
Q ss_pred EECCCCCeEEeecccccccCCCCCee-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc--CCCCCcccCCCC
Q 001561 906 LLDEKFEAHLADFGLSRLLRPYDTHV-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT--GRRPVEVCKGKN 982 (1052)
Q Consensus 906 ll~~~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--G~~pf~~~~~~~ 982 (1052)
++++++.++++|||+++.+....... .....+++.|+|||......++.++|||||||++|||++ |..||.....
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~-- 239 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD-- 239 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh--
Confidence 99999999999999998654332211 122344678999998888889999999999999999998 7788853221
Q ss_pred chhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 983 CRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
.+.................. +.+..++..+.+++.+|++.||++||++.|+++.|++
T Consensus 240 -~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 -EQVIENTGEFFRDQGRQVYL------PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred -HHHHHHHHHHHhhccccccC------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 12221111111110000000 0011123478899999999999999999999999864
No 157
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.9e-35 Score=326.26 Aligned_cols=260 Identities=28% Similarity=0.404 Sum_probs=205.2
Q ss_pred cCCcccCeEcccCceEEEEEEEC--------CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCC
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT--------NGTKAAVKRLSGDC-GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGN 840 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 840 (1052)
++|.+.+.||+|+||.||+|... ++..+|+|.+.... .....++.+|+++++++ +||||+++++++.+.+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 46889999999999999999753 23469999987543 33445688899999999 7999999999999999
Q ss_pred eEEEEEEeccCCChhhhhhcccC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC
Q 001561 841 DRLLIYSYMENGSLDYWLHESVD------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD 908 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~ 908 (1052)
..++||||+++|+|.+++..... ....+++.+++.++.|++.||+|||+. +++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEc
Confidence 99999999999999999976432 124589999999999999999999986 999999999999999
Q ss_pred CCCCeEEeecccccccCCCCCee-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhH
Q 001561 909 EKFEAHLADFGLSRLLRPYDTHV-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDL 986 (1052)
Q Consensus 909 ~~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~ 986 (1052)
+++.+||+|||.++......... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||... ...+.
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~---~~~~~ 251 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV---PVEEL 251 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC---CHHHH
Confidence 99999999999997654322111 112234568999999988889999999999999999998 88998532 11122
Q ss_pred HHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 987 VSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
... ....... ..+.....++.+++.+|++.+|++||++.|+++.|+++.+
T Consensus 252 ~~~----~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 252 FKL----LKEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred HHH----HHcCCCC---------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 211 1111110 1111223478899999999999999999999999988754
No 158
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.3e-34 Score=322.03 Aligned_cols=264 Identities=24% Similarity=0.366 Sum_probs=202.2
Q ss_pred cCCcccCeEcccCceEEEEEEECC---------------CcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeec
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTN---------------GTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQG 834 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~---------------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~ 834 (1052)
++|++.+.||+|+||.||+|.... ...||+|.+.... ......+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578999999999999999987532 2358999987553 334457899999999999999999999
Q ss_pred eEeeCCeEEEEEEeccCCChhhhhhcccC--------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceE
Q 001561 835 YCRHGNDRLLIYSYMENGSLDYWLHESVD--------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNIL 906 (1052)
Q Consensus 835 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nil 906 (1052)
++...+..++||||+++++|.+++..... ....+++..++.++.|+++|++|||+. +++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEE
Confidence 99999999999999999999999864321 112468899999999999999999986 9999999999999
Q ss_pred ECCCCCeEEeecccccccCCCCCe-eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc--CCCCCcccCCCCc
Q 001561 907 LDEKFEAHLADFGLSRLLRPYDTH-VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT--GRRPVEVCKGKNC 983 (1052)
Q Consensus 907 l~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--G~~pf~~~~~~~~ 983 (1052)
+++++.+|++|||++......... ......+++.|+|||+.....++.++||||||+++|||++ |..||.... .
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~---~ 238 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS---D 238 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC---h
Confidence 999999999999999765432221 1222345678999999888889999999999999999998 667875322 1
Q ss_pred hhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 984 RDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
.+................... .....+..+.+++.+|++.+|++||++++|++.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 239 EQVIENTGEFFRNQGRQIYLS------QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHHHHhhhhccccccCC------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 222222111111100000000 011123478999999999999999999999999864
No 159
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=6.7e-35 Score=321.81 Aligned_cols=257 Identities=29% Similarity=0.474 Sum_probs=204.7
Q ss_pred cCCcccCeEcccCceEEEEEEEC------CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT------NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
++|+..+.||+|+||.||+|... ++..+|+|.+..........+.+|++++++++|+||+++++++.+++..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 46778899999999999999642 356899999886666666789999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcccC-----------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCe
Q 001561 845 IYSYMENGSLDYWLHESVD-----------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEA 913 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~ 913 (1052)
||||+++|+|.+++..... ....+++..++.++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 9999999999999875421 113588999999999999999999986 99999999999999999999
Q ss_pred EEeecccccccCCCCCe-eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHH
Q 001561 914 HLADFGLSRLLRPYDTH-VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVF 991 (1052)
Q Consensus 914 kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~ 991 (1052)
||+|||+++........ ......+++.|+|||...+..++.++|||||||++|||++ |++||.... ..+......
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~---~~~~~~~~~ 238 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS---NTEAIECIT 238 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCC---HHHHHHHHH
Confidence 99999999765432211 1122345778999999988899999999999999999998 999985322 112221111
Q ss_pred HhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 992 QMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
....... +...+..+.+++.+|++.||.+||++.|+.+.|++
T Consensus 239 ----~~~~~~~---------~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 239 ----QGRELER---------PRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred ----cCccCCC---------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1100000 01123468899999999999999999999999864
No 160
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.1e-34 Score=315.57 Aligned_cols=246 Identities=23% Similarity=0.403 Sum_probs=194.9
Q ss_pred EcccCceEEEEEEEC---CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCCh
Q 001561 779 IGCGGFGLVYKATLT---NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSL 854 (1052)
Q Consensus 779 lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 854 (1052)
||+|+||.||+|.+. ++..||+|++.... ....+++.+|+.++++++||||+++++++. .+..++||||+++|+|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence 899999999999764 35579999987553 334467899999999999999999999885 4578999999999999
Q ss_pred hhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeee--
Q 001561 855 DYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVT-- 932 (1052)
Q Consensus 855 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~-- 932 (1052)
.+++... ...+++..+++++.|++.|++|||+. +++||||||+||+++.++.+|++|||++...........
T Consensus 82 ~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 82 NKFLSGK---KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred HHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 9998742 34689999999999999999999986 999999999999999999999999999986543322211
Q ss_pred ecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 933 TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 933 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
....+++.|+|||......++.++||||||+++||+++ |+.||..... .+....+. ..... ..
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~----~~~~~---------~~ 219 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG---PEVMSFIE----QGKRL---------DC 219 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH---HHHHHHHH----CCCCC---------CC
Confidence 11233578999999888889999999999999999996 9999964322 12211111 11100 01
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
+.....++.+++.+|++.+|++||++.+|.+.|+.+
T Consensus 220 ~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 220 PAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 112345788999999999999999999999999865
No 161
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-35 Score=297.06 Aligned_cols=271 Identities=24% Similarity=0.390 Sum_probs=217.9
Q ss_pred cHHHHHHhhcCCcccCeEcccCceEEEEEE-ECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcC-CCceeeeeceEeeC
Q 001561 762 TVSDLLKSTNNFNQANIIGCGGFGLVYKAT-LTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQ-HKNLVSLQGYCRHG 839 (1052)
Q Consensus 762 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~ 839 (1052)
+++|+.+-+ .++||+|+|+.|..+. ..+|..||||++.+..+....++.+|++++...+ |+||++++++|+++
T Consensus 74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 466776666 4579999999999986 6689999999999988888899999999999995 99999999999999
Q ss_pred CeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCC---CeEEe
Q 001561 840 NDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKF---EAHLA 916 (1052)
Q Consensus 840 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~---~~kl~ 916 (1052)
+..|+|||-|.||.|-.++++ ...+++.++.++..+|+.||.|||. +||+|||+||+|||..+-. -+|||
T Consensus 149 ~~FYLVfEKm~GGplLshI~~----~~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiC 221 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQK----RKHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKIC 221 (463)
T ss_pred ceEEEEEecccCchHHHHHHH----hhhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeee
Confidence 999999999999999999885 4568999999999999999999998 5999999999999997554 47999
Q ss_pred ecccccccCCCC------CeeeecccccccccCccccC-----CcCCCcccchHHHHHHHHHHHcCCCCCccc-------
Q 001561 917 DFGLSRLLRPYD------THVTTDLVGTLGYIPPEYSQ-----TLTATCRGDVYSFGVVLLELLTGRRPVEVC------- 978 (1052)
Q Consensus 917 DfG~a~~~~~~~------~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltG~~pf~~~------- 978 (1052)
||.++..+.-.. +......+|+..|||||++. ...|+.++|.||+|||+|-|++|.+||.+.
T Consensus 222 DfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGW 301 (463)
T KOG0607|consen 222 DFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGW 301 (463)
T ss_pred ccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCc
Confidence 999886543211 11223458999999999643 346889999999999999999999999753
Q ss_pred -CCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcCcc
Q 001561 979 -KGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIGID 1050 (1052)
Q Consensus 979 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~~~ 1050 (1052)
.++.++...+..+....++. .++.|+ .....+.+..+++...+..||.+|-++.+++. +..++.++
T Consensus 302 drGe~Cr~CQ~~LFesIQEGk-YeFPdk-----dWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 302 DRGEVCRVCQNKLFESIQEGK-YEFPDK-----DWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred cCCCccHHHHHHHHHHHhccC-CcCChh-----hhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 23445555666665554432 222222 22345567889999999999999999999987 55555443
No 162
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.2e-34 Score=315.16 Aligned_cols=256 Identities=25% Similarity=0.386 Sum_probs=198.0
Q ss_pred CcccCeEcccCceEEEEEEECC-Cc--EEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC------Ce
Q 001561 773 FNQANIIGCGGFGLVYKATLTN-GT--KAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG------ND 841 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~~-g~--~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 841 (1052)
|.+.+.||+|+||.||+|.+.+ +. .||+|.++... ....+.+.+|++++++++||||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3457889999999999998763 33 68999886542 33456788999999999999999999987532 24
Q ss_pred EEEEEEeccCCChhhhhhccc--CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecc
Q 001561 842 RLLIYSYMENGSLDYWLHESV--DKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFG 919 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG 919 (1052)
.++||||+++|+|.+++.... .....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 689999999999998875322 2234589999999999999999999986 99999999999999999999999999
Q ss_pred cccccCCCCCeee-ecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcc
Q 001561 920 LSRLLRPYDTHVT-TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEK 997 (1052)
Q Consensus 920 ~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
+++.+........ ....+++.|+|||...+..++.++||||||+++|||++ |+.||... ...+....+. ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~---~~~~~~~~~~----~~ 230 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV---ENSEIYDYLR----QG 230 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC---CHHHHHHHHH----cC
Confidence 9987643322111 12245678999999998899999999999999999999 89998632 1122221111 11
Q ss_pred cccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 998 REVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 998 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
.... ........+.+++.+|++.+|++||++.|+++.|+++
T Consensus 231 ~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 231 NRLK---------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1100 0112234688999999999999999999999999875
No 163
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.9e-35 Score=324.97 Aligned_cols=260 Identities=27% Similarity=0.408 Sum_probs=206.3
Q ss_pred hcCCcccCeEcccCceEEEEEEEC--------CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeC
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT--------NGTKAAVKRLSGDC-GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHG 839 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 839 (1052)
..+|++.+.||+|+||.||+|++. ++..||+|.+.... ....+++.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456888999999999999999742 24579999887543 33456789999999999 899999999999999
Q ss_pred CeEEEEEEeccCCChhhhhhcccC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEE
Q 001561 840 NDRLLIYSYMENGSLDYWLHESVD------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILL 907 (1052)
Q Consensus 840 ~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill 907 (1052)
...++||||+++|+|.+++..... ....+++.++..++.|+++|++|||+. +|+||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEE
Confidence 999999999999999999976421 124578899999999999999999986 99999999999999
Q ss_pred CCCCCeEEeecccccccCCCCCee-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchh
Q 001561 908 DEKFEAHLADFGLSRLLRPYDTHV-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRD 985 (1052)
Q Consensus 908 ~~~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~ 985 (1052)
++++.+||+|||.++......... .....+++.|+|||+..+..++.++||||||+++|||++ |..||... +..+
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~---~~~~ 247 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI---PVEE 247 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC---CHHH
Confidence 999999999999998765432221 222345678999999988889999999999999999998 88888532 2222
Q ss_pred HHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 986 LVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
....+ ....... .+......+.+++.+|++.+|.+||++.|+++.|+++.
T Consensus 248 ~~~~~----~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 248 LFKLL----KEGHRMD---------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred HHHHH----HcCCcCC---------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 22211 1111100 01123347889999999999999999999999998874
No 164
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.1e-34 Score=317.97 Aligned_cols=255 Identities=28% Similarity=0.479 Sum_probs=203.4
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CC---cEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NG---TKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
.+|+..+.||+|+||.||+|... ++ ..+|+|.+.... ....+++..|++++++++|||++++++++.+.+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46788899999999999999865 33 379999887543 33456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+++++|.+++.. ....+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||++....
T Consensus 85 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 85 TEYMENGALDKYLRD---HDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 999999999999875 235689999999999999999999986 99999999999999999999999999998764
Q ss_pred CCCCeeee--cccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccc
Q 001561 926 PYDTHVTT--DLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI 1002 (1052)
Q Consensus 926 ~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
........ ....++.|+|||++....++.++||||||+++|||++ |+.||.... ..+....+. .....
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~---~~~~~~~i~---~~~~~--- 229 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS---NHEVMKAIN---DGFRL--- 229 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC---HHHHHHHHh---cCCCC---
Confidence 33222111 1223457999999988889999999999999999997 999986322 112221111 11000
Q ss_pred ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1003 IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
+.......++.+++.+|++.+|++||++.+|++.|+++
T Consensus 230 -------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 230 -------PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00112234689999999999999999999999999876
No 165
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.1e-34 Score=327.16 Aligned_cols=243 Identities=23% Similarity=0.327 Sum_probs=192.4
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
+.||+|+||+||+|... +++.||+|+++.... ...+.+.+|+.++.++ +||+|+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 678999999975432 2334578899999888 699999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|..++.. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~ 152 (327)
T cd05617 81 GDLMFHMQR----QRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP-GDT 152 (327)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCC-CCc
Confidence 999888764 34689999999999999999999986 9999999999999999999999999999753221 122
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||.............+.......... .+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~--------- 222 (327)
T cd05617 153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI-RI--------- 222 (327)
T ss_pred eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC-CC---------
Confidence 33467999999999999999999999999999999999999999643322222222222222211110 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCH
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRPFI 1037 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RPs~ 1037 (1052)
+...+..+.+++.+|++.||++||++
T Consensus 223 p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 223 PRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 11122367899999999999999985
No 166
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=5.7e-35 Score=326.09 Aligned_cols=257 Identities=30% Similarity=0.471 Sum_probs=201.1
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCc--EEEEEEecCCc-hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGT--KAAVKRLSGDC-GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 845 (1052)
++|++.+.||+|+||.||+|.+. ++. .+|+|.+.... .....++.+|++++.++ +||||+++++++.+++..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46888899999999999999865 454 45777776432 33456788999999999 899999999999999999999
Q ss_pred EEeccCCChhhhhhcccC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCe
Q 001561 846 YSYMENGSLDYWLHESVD------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEA 913 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~ 913 (1052)
|||+++|+|.++++.... ....+++.+++.++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcE
Confidence 999999999999975421 123588999999999999999999986 99999999999999999999
Q ss_pred EEeecccccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHH
Q 001561 914 HLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQ 992 (1052)
Q Consensus 914 kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~ 992 (1052)
||+|||++........ .....++..|+|||+.....++.++|||||||++|||+| |..||.... ..+.....
T Consensus 164 kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~---~~~~~~~~-- 236 (303)
T cd05088 164 KIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT---CAELYEKL-- 236 (303)
T ss_pred EeCccccCcccchhhh--cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCC---hHHHHHHH--
Confidence 9999999864321111 111234668999999888889999999999999999998 999996322 12222111
Q ss_pred hhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 993 MKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
. ...... ........+.+++.+|++.+|++||++.++++.|+++.
T Consensus 237 -~-~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 237 -P-QGYRLE---------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred -h-cCCcCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 100000 01112336889999999999999999999999988764
No 167
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.1e-34 Score=317.89 Aligned_cols=255 Identities=27% Similarity=0.459 Sum_probs=204.4
Q ss_pred cCCcccCeEcccCceEEEEEEEC-C---CcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-N---GTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~---g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
.+|++.+.||+|+||.||+|... + +..+|+|.++... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46888999999999999999764 2 3379999887543 33456789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+++++|.+++... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++|||.+..+.
T Consensus 84 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 84 TEYMENGSLDAFLRKH---DGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 9999999999999753 34589999999999999999999986 99999999999999999999999999998765
Q ss_pred CCCCeeee--cccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccc
Q 001561 926 PYDTHVTT--DLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI 1002 (1052)
Q Consensus 926 ~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
........ ...++..|+|||.+.+..++.++||||||+++||+++ |+.||.... ..+....+.... . .
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~---~~~~~~~~~~~~---~---~ 228 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS---NQDVIKAIEEGY---R---L 228 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC---HHHHHHHHhCCC---c---C
Confidence 43322222 1233568999999998889999999999999999886 999986422 122222221110 0 0
Q ss_pred ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1003 IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
+.....+..+.+++.+|++.+|.+||++.++++.|+++
T Consensus 229 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 -------PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -------CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 00112234688999999999999999999999999875
No 168
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=9.2e-35 Score=324.12 Aligned_cols=257 Identities=27% Similarity=0.429 Sum_probs=204.3
Q ss_pred cCCcccCeEcccCceEEEEEEEC------CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT------NGTKAAVKRLSGDC-GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDR 842 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 842 (1052)
++|++.+.||+|+||.||+|... ++..||+|+++... ....+.+.+|+++++++ +||||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 46888999999999999999742 34579999887543 33345788999999999 799999999999999999
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
++||||+++|+|.++++... ...+++.++..++.|++.|++|||+. +|+|+||||+||+++.++.++++|||.++
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKR--ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcccc
Confidence 99999999999999987532 23489999999999999999999986 99999999999999999999999999998
Q ss_pred ccCCCCCe-eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 923 LLRPYDTH-VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 923 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
........ ......+++.|+|||.+.+..++.++||||+||++|||++ |+.||...... ........ .....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~--~~~~~~~~----~~~~~ 263 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD--SKFYKLIK----EGYRM 263 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch--HHHHHHHH----cCCcC
Confidence 76433221 1222356778999999988889999999999999999998 99998643211 11111111 11000
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
. .......++.+++.+|++++|++||++.|+++.|++.
T Consensus 264 ~---------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 264 A---------QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred C---------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0 0111234789999999999999999999999999864
No 169
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=9.9e-35 Score=335.13 Aligned_cols=250 Identities=24% Similarity=0.304 Sum_probs=194.3
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
+|+..+.||+|+||+||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999865 68899999987532 2234567899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 82 ~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 82 YIPGGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 9999999998864 24578899999999999999999986 9999999999999999999999999997543210
Q ss_pred C----------------------------------------------CeeeecccccccccCccccCCcCCCcccchHHH
Q 001561 928 D----------------------------------------------THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSF 961 (1052)
Q Consensus 928 ~----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvwsl 961 (1052)
. .......+||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 0 000123479999999999999899999999999
Q ss_pred HHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCC---HH
Q 001561 962 GVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPF---IE 1038 (1052)
Q Consensus 962 Gvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~ 1038 (1052)
||++|||++|++||..... .+... ........... +.......++.+++.+|+ .+|++|++ +.
T Consensus 235 Gvil~elltG~~Pf~~~~~---~~~~~---~i~~~~~~~~~-------p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ 300 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTP---LETQM---KVINWQTSLHI-------PPQAKLSPEASDLIIKLC-RGPEDRLGKNGAD 300 (382)
T ss_pred hHHHHHHHhCCCCCCCCCH---HHHHH---HHHccCCCcCC-------CCcccCCHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence 9999999999999964221 11111 11110000000 001112345778887776 59999997 88
Q ss_pred HHHH
Q 001561 1039 EVVT 1042 (1052)
Q Consensus 1039 evl~ 1042 (1052)
|+++
T Consensus 301 ei~~ 304 (382)
T cd05625 301 EIKA 304 (382)
T ss_pred HHhc
Confidence 8765
No 170
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.4e-34 Score=314.92 Aligned_cols=249 Identities=25% Similarity=0.373 Sum_probs=203.7
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCC--chhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGD--CGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|+..+.||+|++|.||+|... +++.||+|.+... .....+++.+|++++++++|||++++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777889999999999999865 6899999988643 234556788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++++|.++++.. ....+++..++.++.+++.|++|||+. +++||||||+||++++++.++++|||.++......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 81 AENGDLHKLLKMQ--RGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 9999999999764 245688999999999999999999986 99999999999999999999999999998765432
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
. ......|++.|+|||+..+..++.++||||||+++|||++|+.||.... .......... ....
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~----~~~~-------- 219 (256)
T cd08529 156 N-FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN---QGALILKIIR----GVFP-------- 219 (256)
T ss_pred c-hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHc----CCCC--------
Confidence 2 2233468899999999998889999999999999999999999996322 1122211111 1000
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.........+.+++.+|++.+|++||++.++++
T Consensus 220 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 220 -PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred -CCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 011123347899999999999999999999986
No 171
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=8.7e-35 Score=323.81 Aligned_cols=257 Identities=28% Similarity=0.432 Sum_probs=201.1
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCc--EEEEEEecCC-chhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGT--KAAVKRLSGD-CGQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 845 (1052)
++|++.++||+|+||.||+|... ++. .+|+|.++.. .....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 46888999999999999999865 343 4788887743 233456789999999999 799999999999999999999
Q ss_pred EEeccCCChhhhhhcccC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCe
Q 001561 846 YSYMENGSLDYWLHESVD------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEA 913 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~ 913 (1052)
+||+++|+|.++++.... ....+++..++.++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 999999999999875321 123588999999999999999999986 99999999999999999999
Q ss_pred EEeecccccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHH
Q 001561 914 HLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQ 992 (1052)
Q Consensus 914 kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~ 992 (1052)
||+|||++....... .......+..|+|||+.....++.++|||||||++|||++ |+.||.... ..+.....
T Consensus 159 kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~---~~~~~~~~-- 231 (297)
T cd05089 159 KIADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT---CAELYEKL-- 231 (297)
T ss_pred EECCcCCCcccccee--ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHH--
Confidence 999999986432111 1111223457999999988889999999999999999997 999996422 22222111
Q ss_pred hhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 993 MKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
...... ..+......+.+++.+|++.+|.+||+++++++.|+++.
T Consensus 232 --~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 232 --PQGYRM---------EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred --hcCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111000 011122346889999999999999999999999988764
No 172
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=9.5e-35 Score=320.14 Aligned_cols=257 Identities=27% Similarity=0.424 Sum_probs=202.1
Q ss_pred hcCCcccCeEcccCceEEEEEEECC------CcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTN------GTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDR 842 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 842 (1052)
.++|++.+.||+|++|.||+|.+.+ +..||+|.+.... ...+..+..|+.++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4678899999999999999998753 5678999886443 33456789999999999999999999999998899
Q ss_pred EEEEEeccCCChhhhhhcccC---CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCC---CeEEe
Q 001561 843 LLIYSYMENGSLDYWLHESVD---KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKF---EAHLA 916 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~---~~kl~ 916 (1052)
++||||+++++|.+++..... ....+++..+.+++.|++.|++|||+. +++||||||+||+++.++ .+|++
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEec
Confidence 999999999999999876432 123589999999999999999999986 999999999999998654 59999
Q ss_pred ecccccccCCCCCee-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhh
Q 001561 917 DFGLSRLLRPYDTHV-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMK 994 (1052)
Q Consensus 917 DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~ 994 (1052)
|||+++......... ......+..|+|||++.+..++.++|||||||++|||++ |+.||..... .+....+.
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~---~~~~~~~~--- 235 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN---QEVMEFVT--- 235 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHH---
Confidence 999998763222111 112234568999999988889999999999999999997 9999964221 12221111
Q ss_pred hcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 995 SEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
.... . ..+...+..+.+++.+|++.+|++||++.+|++.|+
T Consensus 236 ~~~~-~---------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 236 GGGR-L---------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred cCCc-C---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1100 0 011122347889999999999999999999999876
No 173
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.3e-34 Score=324.62 Aligned_cols=241 Identities=27% Similarity=0.346 Sum_probs=191.3
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
+.||+|+||+||+|... +++.||+|+++... ......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999876 57899999987542 12234456777888764 899999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|.+++.. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++...... ..
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (316)
T cd05619 81 GDLMFHIQS----CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AK 152 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-Cc
Confidence 999998864 34578999999999999999999986 99999999999999999999999999987532221 12
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||... +..+..+.+.. ... ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~---~~~~~~~~i~~---~~~---~~-------- 215 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGH---DEEELFQSIRM---DNP---CY-------- 215 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCC---CHHHHHHHHHh---CCC---CC--------
Confidence 33457999999999999889999999999999999999999999642 22222222111 000 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRPFIE-EVVT 1042 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 1042 (1052)
+.....++.+++.+|++.+|++||++. ++.+
T Consensus 216 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 216 PRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 111234678999999999999999997 5543
No 174
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.1e-34 Score=322.57 Aligned_cols=249 Identities=22% Similarity=0.383 Sum_probs=203.0
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
++|++.+.||+|+||.||+|... ++..||+|.+........+.+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 57888999999999999999854 68899999987665555677889999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++.. ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+........
T Consensus 100 ~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 100 AGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred CCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 99999998853 3478899999999999999999986 999999999999999999999999999886543221
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......|++.|+|||...+..++.++|||||||++|+|++|+.||..... .. +........ ....
T Consensus 172 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~---~~---~~~~~~~~~-~~~~------- 236 (296)
T cd06654 172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP---LR---ALYLIATNG-TPEL------- 236 (296)
T ss_pred -ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH---HH---hHHHHhcCC-CCCC-------
Confidence 12334788999999999888899999999999999999999999963221 11 111111100 0000
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..+......+.+++.+|+.++|++||++.|+++
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 011223346889999999999999999999987
No 175
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3.6e-34 Score=318.87 Aligned_cols=265 Identities=27% Similarity=0.407 Sum_probs=206.5
Q ss_pred hcCCcccCeEcccCceEEEEEEECC-----------------CcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceee
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTN-----------------GTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVS 831 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 831 (1052)
.++|++.+.||+|+||.||+|...+ +..||+|.+.... ....+++.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578999999999999999997542 2458999987554 334567899999999999999999
Q ss_pred eeceEeeCCeEEEEEEeccCCChhhhhhcccC-------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCc
Q 001561 832 LQGYCRHGNDRLLIYSYMENGSLDYWLHESVD-------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSN 904 (1052)
Q Consensus 832 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~N 904 (1052)
+++++..++..++||||+++++|.+++..... ....+++..++.++.|++.|++|||+. +|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 99999999999999999999999999876431 123689999999999999999999986 99999999999
Q ss_pred eEECCCCCeEEeecccccccCCCCC-eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc--CCCCCcccCCC
Q 001561 905 ILLDEKFEAHLADFGLSRLLRPYDT-HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT--GRRPVEVCKGK 981 (1052)
Q Consensus 905 ill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt--G~~pf~~~~~~ 981 (1052)
|+++.++.++++|||.++....... .......+++.|+|||+.....++.++||||||+++|||++ |..||....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-- 238 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT-- 238 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--
Confidence 9999999999999999986543221 12233456789999999888889999999999999999998 777875322
Q ss_pred CchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 982 NCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
..+.................. ......+.++.+++.+|++.+|++||++.|++++|++
T Consensus 239 -~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 239 -DQQVIENAGHFFRDDGRQIYL------PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred -hHHHHHHHHhccccccccccC------CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 222222222211111100000 0111223478999999999999999999999999863
No 176
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=7.3e-35 Score=321.12 Aligned_cols=258 Identities=24% Similarity=0.416 Sum_probs=205.7
Q ss_pred hcCCcccCeEcccCceEEEEEEECC------CcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTN------GTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDR 842 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 842 (1052)
.++|++.+.||+|+||.||+|...+ +..||+|.+.... ......+.+|+.+++.++||||+++++++..+...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 3578889999999999999997642 3689999986543 33445788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhcccCC------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEe
Q 001561 843 LLIYSYMENGSLDYWLHESVDK------DSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLA 916 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~ 916 (1052)
++||||+++|+|.+++...... ...+++..++.++.|++.|++|||+. +|+||||||+||++++++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 9999999999999998754321 23478899999999999999999986 99999999999999999999999
Q ss_pred ecccccccCCCCC-eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhh
Q 001561 917 DFGLSRLLRPYDT-HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMK 994 (1052)
Q Consensus 917 DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~ 994 (1052)
|||+++....... .......++..|+|||...+..++.++||||||+++||+++ |+.||... ..........
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~---~~~~~~~~~~--- 235 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL---SNEEVLKFVI--- 235 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC---CHHHHHHHHh---
Confidence 9999986543321 12223456789999999888889999999999999999998 99998632 2222222221
Q ss_pred hcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 995 SEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
........ ...+.++.+++.+|++.+|++|||+.|+++.|++
T Consensus 236 -~~~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 236 -DGGHLDLP---------ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred -cCCCCCCC---------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 11111111 1123478999999999999999999999999864
No 177
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.4e-34 Score=315.58 Aligned_cols=254 Identities=26% Similarity=0.428 Sum_probs=205.2
Q ss_pred hcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.++|++.+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++|+||+++++++.+ ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 46789999999999999999998778889999887543 234578899999999999999999999887 7789999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++... ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+........
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 157 (260)
T cd05073 83 AKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 157 (260)
T ss_pred CCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence 999999998753 244578899999999999999999986 999999999999999999999999999976543222
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.......++..|+|||++....++.++|+||||+++|++++ |+.||... ...+...+... .....
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~---~~~~~~~~~~~----~~~~~------- 223 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM---SNPEVIRALER----GYRMP------- 223 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCC---CHHHHHHHHhC----CCCCC-------
Confidence 22223345678999999988889999999999999999998 99998632 22222222111 10000
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
.......++.+++.+|++++|++||++.++.+.|++
T Consensus 224 --~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 --RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred --CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 011223478899999999999999999999999976
No 178
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=325.42 Aligned_cols=245 Identities=26% Similarity=0.379 Sum_probs=202.5
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCChh
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSLD 855 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 855 (1052)
-++|+|.||+||-|+.. +...+|||.+.....+....+.+|+..-++++|.|||+++|.|.+++..-+.||-++||+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 37999999999999865 45679999998766666667899999999999999999999999999999999999999999
Q ss_pred hhhhcccCCcccc--CHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC-CCCCeEEeecccccccCCCCCeee
Q 001561 856 YWLHESVDKDSVL--KWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD-EKFEAHLADFGLSRLLRPYDTHVT 932 (1052)
Q Consensus 856 ~~l~~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~-~~~~~kl~DfG~a~~~~~~~~~~~ 932 (1052)
+.++... +++ .+.+.-.+.+||++||.|||.. .|||||||-+|||++ -.|.+||+|||-++++.. -+..+
T Consensus 661 sLLrskW---GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-inP~T 733 (1226)
T KOG4279|consen 661 SLLRSKW---GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-INPCT 733 (1226)
T ss_pred HHHHhcc---CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc-CCccc
Confidence 9998754 334 6677888999999999999986 999999999999996 679999999999998754 34556
Q ss_pred ecccccccccCccccCCc--CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccch
Q 001561 933 TDLVGTLGYIPPEYSQTL--TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHK 1010 (1052)
Q Consensus 933 ~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
.++.||..|||||++..+ .|..++|||||||++.||.||++||....... ..++...-.+ . ..+
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq-----AAMFkVGmyK-----v----HP~ 799 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ-----AAMFKVGMYK-----V----HPP 799 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh-----Hhhhhhccee-----c----CCC
Confidence 678999999999988654 58889999999999999999999996433221 1122111111 1 123
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1011 DREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1011 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+++...+...+|.+|+.+||.+||++.++++
T Consensus 800 iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 800 IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 34556678899999999999999999999986
No 179
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.1e-35 Score=322.83 Aligned_cols=256 Identities=24% Similarity=0.385 Sum_probs=202.4
Q ss_pred CCcccCeEcccCceEEEEEEECC------CcEEEEEEecCCch-hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLTN------GTKAAVKRLSGDCG-QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
+|++.+.||+|+||.||+|...+ +..||+|++..... ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 46678889999999999998642 46899999875542 334668899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhccc------------CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCC
Q 001561 845 IYSYMENGSLDYWLHESV------------DKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFE 912 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~ 912 (1052)
++||+++++|.+++.... .....+++..+.+++.|++.|++|+|+. +|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 999999999999985321 1123578899999999999999999986 9999999999999999999
Q ss_pred eEEeecccccccCCCCC-eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHH
Q 001561 913 AHLADFGLSRLLRPYDT-HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWV 990 (1052)
Q Consensus 913 ~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~ 990 (1052)
+||+|||+++....... .......+++.|+|||.+....++.++||||||+++|||++ |..||... ...+..+.+
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~---~~~~~~~~i 239 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY---SNQDVIEMI 239 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC---CHHHHHHHH
Confidence 99999999887543322 12233456789999999888889999999999999999998 88888632 222222221
Q ss_pred HHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 991 FQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
.. .... ..+......+.+++.+|++.+|++||+++|+++.|+.
T Consensus 240 ~~----~~~~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 240 RN----RQVL---------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred Hc----CCcC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11 1110 0111233468899999999999999999999999874
No 180
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.2e-34 Score=322.99 Aligned_cols=240 Identities=26% Similarity=0.345 Sum_probs=190.9
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
++||+|+||.||+|+.. +|+.||+|.++... ......+..|.+++... +||+|+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999876 68899999987542 12334566777787765 899999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 152 (316)
T cd05620 81 GDLMFHIQD----KGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-DNR 152 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccC-CCc
Confidence 999988864 34588999999999999999999986 9999999999999999999999999998753221 222
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||... +.....+.+.. .. .. .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~---~~~~~~~~~~~---~~--~~-----~---- 215 (316)
T cd05620 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD---DEDELFESIRV---DT--PH-----Y---- 215 (316)
T ss_pred eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC---CHHHHHHHHHh---CC--CC-----C----
Confidence 34467999999999999989999999999999999999999999632 22222221111 00 00 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRPFIE-EVV 1041 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 1041 (1052)
+.....++.+++.+|++.||++||++. ++.
T Consensus 216 ~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 216 PRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 011234688999999999999999985 554
No 181
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.9e-35 Score=330.82 Aligned_cols=238 Identities=25% Similarity=0.321 Sum_probs=192.1
Q ss_pred CeEcccCceEEEEEEE----CCCcEEEEEEecCCch--hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEecc
Q 001561 777 NIIGCGGFGLVYKATL----TNGTKAAVKRLSGDCG--QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
+.||+|+||.||+++. .+|+.||+|++..... .....+..|++++++++||||+++++++.+++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999974 3578999999875432 223456789999999999999999999999999999999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...... .
T Consensus 82 ~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~ 153 (318)
T cd05582 82 GGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-K 153 (318)
T ss_pred CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-C
Confidence 9999998864 34689999999999999999999986 99999999999999999999999999998654322 2
Q ss_pred eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccch
Q 001561 931 VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHK 1010 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
......||+.|+|||++.+..++.++||||||+++|||++|+.||... +..+....+. .... .
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~---~~~~~~~~i~---~~~~--~--------- 216 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGK---DRKETMTMIL---KAKL--G--------- 216 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCC---CHHHHHHHHH---cCCC--C---------
Confidence 233467999999999998888999999999999999999999999632 2122221111 1100 0
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 001561 1011 DREKQLLEMLEIACKCIDQDPRRRPFIEE 1039 (1052)
Q Consensus 1011 ~~~~~~~~l~~li~~cl~~dP~~RPs~~e 1039 (1052)
.+......+.+++.+|++.||++||++.+
T Consensus 217 ~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 217 MPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 01112346789999999999999999554
No 182
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.1e-34 Score=325.44 Aligned_cols=254 Identities=24% Similarity=0.278 Sum_probs=195.9
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||+||+|+.. +++.||+|++.+.. ....+.+.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46889999999999999999865 68899999986421 223355788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred ecCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 999999999998652 34588999999999999999999986 999999999999999999999999999977654
Q ss_pred CCCeeeecccccccccCccccCC-----cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQT-----LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVE 1001 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1052)
..........||+.|+|||++.. ..++.++||||+||++|||++|+.||... ...+....+ ........
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~---~~~~~~~~i---~~~~~~~~ 228 (331)
T cd05597 155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE---SLVETYGKI---MNHKEHFQ 228 (331)
T ss_pred CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC---CHHHHHHHH---HcCCCccc
Confidence 33322333579999999998763 45788999999999999999999999632 111111111 11111111
Q ss_pred cccccccchhhHHHHHHHHHHHHHcccCCC--CCCCCHHHHHH
Q 001561 1002 IIDASIWHKDREKQLLEMLEIACKCIDQDP--RRRPFIEEVVT 1042 (1052)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP--~~RPs~~evl~ 1042 (1052)
+.. .....+..+.+++.+|+..++ ..||++.++++
T Consensus 229 ~~~------~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 229 FPP------DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred CCC------ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 100 011133467888888775533 34789999887
No 183
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.8e-34 Score=311.44 Aligned_cols=252 Identities=24% Similarity=0.440 Sum_probs=202.7
Q ss_pred cCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEecc
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
.+|++.+.||+|+||.||+|.+.++..+|+|.+..... ...++.+|++++++++||+++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 35788899999999999999887788999998875432 34568899999999999999999999999999999999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+++|.+++... ...++++.+..++.+++.|++|||+. +++||||||+||+++.++.++|+|||.++........
T Consensus 83 ~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 156 (256)
T cd05112 83 HGCLSDYLRAQ---RGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156 (256)
T ss_pred CCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence 99999988752 34578999999999999999999986 9999999999999999999999999999865432222
Q ss_pred eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 931 VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......++.+|+|||...+..++.++||||||+++|||++ |+.||... ...+..+... .. .....+..
T Consensus 157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~---~~~~~~~~~~----~~--~~~~~~~~-- 225 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENR---SNSEVVETIN----AG--FRLYKPRL-- 225 (256)
T ss_pred ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcC---CHHHHHHHHh----CC--CCCCCCCC--
Confidence 2222345678999999988889999999999999999998 99998632 1122222111 10 01111111
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
...++.+++.+|++.+|++||++.|++++|.
T Consensus 226 -----~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 226 -----ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred -----CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1247899999999999999999999999873
No 184
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.6e-34 Score=314.44 Aligned_cols=249 Identities=27% Similarity=0.417 Sum_probs=200.6
Q ss_pred cCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEe-eCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCR-HGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~ 849 (1052)
++|++.+.||+|+||.||+|... |..||+|.++.+. ..+.+.+|+.++++++|+|++++++++. +++..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46888999999999999999775 8889999986543 2456889999999999999999999764 456789999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++... ....+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||+++......
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 156 (256)
T cd05082 83 AKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 156 (256)
T ss_pred CCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC-
Confidence 999999998753 234578999999999999999999986 99999999999999999999999999987653322
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
....++..|+|||+..+..++.++||||||+++|||++ |+.||... ...+...++.. .....
T Consensus 157 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~---~~~~~~~~~~~----~~~~~------- 219 (256)
T cd05082 157 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI---PLKDVVPRVEK----GYKMD------- 219 (256)
T ss_pred ---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC---CHHHHHHHHhc----CCCCC-------
Confidence 12344568999999988889999999999999999997 99998632 11222222111 11111
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
.....+..+.+++.+|++.+|++||++.++++.|+++
T Consensus 220 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 220 --APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred --CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 1112234788999999999999999999999999875
No 185
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.3e-34 Score=325.28 Aligned_cols=241 Identities=24% Similarity=0.322 Sum_probs=193.5
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
+.||+|+||+||+|... ++..||+|+++... ......+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999876 57899999987542 22334567888888888 699999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (318)
T cd05570 81 GDLMFHIQR----SGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VT 152 (318)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Cc
Confidence 999988864 34689999999999999999999986 99999999999999999999999999987532221 22
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||... +.......+. .... . .
T Consensus 153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~---~~~~~~~~i~---~~~~--~---------~ 215 (318)
T cd05570 153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGD---DEDELFQSIL---EDEV--R---------Y 215 (318)
T ss_pred ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCC---CHHHHHHHHH---cCCC--C---------C
Confidence 23457999999999999999999999999999999999999999632 2222221111 1100 0 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRPFI-----EEVVT 1042 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 1042 (1052)
+.....++.+++.+|++.||++||++ .++++
T Consensus 216 ~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 216 PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 11123468899999999999999999 88765
No 186
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.9e-34 Score=348.40 Aligned_cols=263 Identities=21% Similarity=0.326 Sum_probs=203.8
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEee--CCeEE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRH--GNDRL 843 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 843 (1052)
..++|++.+.||+|+||+||+|... ++..||+|.+.... ......+..|+.++++++|||||+++++|.+ ....|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 3467999999999999999999865 57789999886432 3345678899999999999999999998854 35689
Q ss_pred EEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcC----CCCeEEcCCCCCceEECC----------
Q 001561 844 LIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVC----EPHIVHRDVKSSNILLDE---------- 909 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----~~~i~HrDlkp~Nill~~---------- 909 (1052)
+||||+++|+|.+++.........+++..++.|+.||+.||+|||+.. .++|+||||||+|||++.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 999999999999999865545567999999999999999999999852 136999999999999964
Q ss_pred -------CCCeEEeecccccccCCCCCeeeecccccccccCccccCC--cCCCcccchHHHHHHHHHHHcCCCCCcccCC
Q 001561 910 -------KFEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQT--LTATCRGDVYSFGVVLLELLTGRRPVEVCKG 980 (1052)
Q Consensus 910 -------~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltG~~pf~~~~~ 980 (1052)
.+.+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~- 247 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN- 247 (1021)
T ss_pred cccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC-
Confidence 3458999999998764321 2234579999999998753 458899999999999999999999996321
Q ss_pred CCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcCc
Q 001561 981 KNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIGI 1049 (1052)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~~ 1049 (1052)
....+ ............ .....++.++|..||+.+|.+||++.|+++ ++..+.+
T Consensus 248 -~~~ql----i~~lk~~p~lpi----------~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~ 303 (1021)
T PTZ00266 248 -NFSQL----ISELKRGPDLPI----------KGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGP 303 (1021)
T ss_pred -cHHHH----HHHHhcCCCCCc----------CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCC
Confidence 11111 111111111000 012346889999999999999999999984 7765543
No 187
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.4e-34 Score=315.72 Aligned_cols=258 Identities=24% Similarity=0.348 Sum_probs=205.2
Q ss_pred cCCcccCeEcccCceEEEEEEECC----CcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTN----GTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
++|++.+.||+|+||.||+|.+.+ ...||+|...... ....+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 458888999999999999998643 2468999887654 4455678999999999999999999998875 457899
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+++|+|.+++... ...+++..++.++.+++.|++|||+. +++||||||+||+++.++.++++|||+++...
T Consensus 85 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 85 MELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEcCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecc
Confidence 9999999999999753 33589999999999999999999986 99999999999999999999999999998764
Q ss_pred CCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
...........+++.|+|||.+....++.++||||||+++||+++ |+.||.... ..+...+... .... .
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~---~~~~~~~~~~---~~~~-~--- 228 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK---NNDVIGRIEN---GERL-P--- 228 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHc---CCcC-C---
Confidence 432222223345568999999888889999999999999999986 999996432 1122222111 1000 0
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCccc
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGIDA 1051 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1051 (1052)
.+...+..+.+++.+|+..+|.+||++.++++.|+++..++
T Consensus 229 ------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~ 269 (270)
T cd05056 229 ------MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE 269 (270)
T ss_pred ------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 01122347889999999999999999999999999987653
No 188
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.8e-34 Score=321.26 Aligned_cols=264 Identities=26% Similarity=0.392 Sum_probs=202.9
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
++|++.+.||+|+||.||+|... ++..+|+|.+.... .....++.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36889999999999999999865 67889999887543 33445688999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++++|.++++.. ..+++..+..++.|+++|++|||+. .+++||||||+||+++.++.+|++|||.+......
T Consensus 81 ~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 153 (308)
T cd06615 81 MDGGSLDQVLKKA----GRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 153 (308)
T ss_pred cCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCccccccc-
Confidence 9999999998742 4588999999999999999999973 38999999999999999999999999998765322
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc--------
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV-------- 1000 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-------- 1000 (1052)
......|++.|+|||...+..++.++||||||+++|||++|+.||.... ......+...........
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD---AKELEAMFGRPVSEGEAKESHRPVSG 228 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc---hhhHHHhhcCccccccccCCcccccC
Confidence 2234578999999999888889999999999999999999999985322 111111110000000000
Q ss_pred ----------------ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhh
Q 001561 1001 ----------------EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDG 1046 (1052)
Q Consensus 1001 ----------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 1046 (1052)
.................++.+++.+|++.+|++||++.|+++ ++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 292 (308)
T cd06615 229 HPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR 292 (308)
T ss_pred CCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence 000000000000013346889999999999999999999988 4544
No 189
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.7e-34 Score=313.99 Aligned_cols=250 Identities=22% Similarity=0.378 Sum_probs=202.3
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
+|++.+.||+|+||.||++... ++..||+|.++... ....+.+..|+.++++++||||+++++++.+++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4788899999999999999865 68899999886432 334567888999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++|++.+++... ....+++..+..++.|++.|++|||+. +|+|+||||+||++++++.++++|||.+.......
T Consensus 81 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 154 (255)
T cd08219 81 DGGDLMQKIKLQ--RGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG- 154 (255)
T ss_pred CCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc-
Confidence 999999888643 344578999999999999999999986 99999999999999999999999999997654322
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
.......|++.|+|||+..+..++.++||||||+++|+|++|+.||... +..... ..... .....
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~---~~~~~~---~~~~~-~~~~~-------- 219 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN---SWKNLI---LKVCQ-GSYKP-------- 219 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC---CHHHHH---HHHhc-CCCCC--------
Confidence 2223457889999999998888999999999999999999999999632 111111 11111 11000
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTW 1043 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1043 (1052)
.+......+.+++.+|++.||++||++.|++..
T Consensus 220 -~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 -LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 111233468899999999999999999999864
No 190
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-37 Score=353.33 Aligned_cols=486 Identities=27% Similarity=0.340 Sum_probs=396.9
Q ss_pred cEEEEEecCCCCcccCCccccCCcCCCeEecCCCCCCCCCcccccCCCCccEEeccCCcccCcccccccccCCccEEEcc
Q 001561 87 RVTMLILPRKGLKGIIPRSLGHLNQLKLLDLSCNHLEGVVPVELSNLKQLEVLDLSHNMLSGPVSGMLAGLNLIQSLNVS 166 (1052)
Q Consensus 87 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~Ls~n~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls 166 (1052)
+++.|++.+|-+-...-+.+..--+|+.||||+|++. ..|..+..+.+|+.|+++.|.|...+ .....+.+|++|+|.
T Consensus 22 ~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~~vp-~s~~~~~~l~~lnL~ 99 (1081)
T KOG0618|consen 22 ALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIRSVP-SSCSNMRNLQYLNLK 99 (1081)
T ss_pred HHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHhhCc-hhhhhhhcchhheec
Confidence 4778888887655432344444555999999999998 67888999999999999999998654 778899999999999
Q ss_pred CcccCCcccccccCCcccEEEecCCccCCccchhhhhcccccceeeccCcccccccccCCCCCCCCEEEcccccCCCCCC
Q 001561 167 SNSFNGSLFELGEFSNLAVFNISNNSFTGKLNSRIWSASKEIQILDLSMNHFMGSLQGLDHSPSLKQLHVDNNLLGGDLP 246 (1052)
Q Consensus 167 ~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~l~~~~~L~~L~L~~N~l~~~~p 246 (1052)
+|.+...|..+..+.+|++|++|+|++. .+|. ....++.++.++.++|..... ++.. .++.+++..|.+.+.++
T Consensus 100 ~n~l~~lP~~~~~lknl~~LdlS~N~f~-~~Pl-~i~~lt~~~~~~~s~N~~~~~---lg~~-~ik~~~l~~n~l~~~~~ 173 (1081)
T KOG0618|consen 100 NNRLQSLPASISELKNLQYLDLSFNHFG-PIPL-VIEVLTAEEELAASNNEKIQR---LGQT-SIKKLDLRLNVLGGSFL 173 (1081)
T ss_pred cchhhcCchhHHhhhcccccccchhccC-CCch-hHHhhhHHHHHhhhcchhhhh---hccc-cchhhhhhhhhcccchh
Confidence 9999999999999999999999999998 4443 345677888999999932222 2222 28999999999999988
Q ss_pred ccccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEccCCcCCCCCcccccCccccccccccCCcccCCCCcccccCCC
Q 001561 247 DSLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFGNQFSGKLPNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSK 326 (1052)
Q Consensus 247 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~ 326 (1052)
..+..+.. .|+|++|.+. --.+.++.+|+.|....|+++.. --..++|+.|+.++|.+....+. ..-.+
T Consensus 174 ~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~~~~~~--p~p~n 242 (1081)
T KOG0618|consen 174 IDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSEL----EISGPSLTALYADHNPLTTLDVH--PVPLN 242 (1081)
T ss_pred cchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceE----EecCcchheeeeccCcceeeccc--ccccc
Confidence 88887777 7999999987 23577889999999999998832 23457899999999999833322 22368
Q ss_pred CcEEEecCccccCcCCcccccCCccceeecccccccCCCCccccCCCccceeecccccccccCchhhccCCcCcEEeccC
Q 001561 327 LHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPLPNSLSDCHDLKILSLAKNELSGQVPESFGKLTSLLFLSLSN 406 (1052)
Q Consensus 327 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 406 (1052)
|++++++.|++++.+ ..+..+.+|+.|+..+|+++ .+|..+...++|+.|++.+|.++ .+|.....++.|+.|+|..
T Consensus 243 l~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~ 319 (1081)
T KOG0618|consen 243 LQYLDISHNNLSNLP-EWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQS 319 (1081)
T ss_pred ceeeecchhhhhcch-HHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehh
Confidence 999999999999765 88899999999999999997 78999999999999999999999 7888888999999999999
Q ss_pred CcCCCCcccchhhccCc-ccceEeccccccCccCCccccCCCcccEEEccCCccccCcchhhhcCCCCcEEeCcCccCCC
Q 001561 407 NSFNHLSGTLSVLQQCK-NLTTLILTKNFVGEEIPENVGGFESLMVLALGNCGLKGHIPVWLLRCKKLQVLDLSWNHFDG 485 (1052)
Q Consensus 407 N~l~~l~~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 485 (1052)
|+|..+|..+ +.-.. +|+.|+.+.|++....-..=..++.|+.|++.+|.++...-..+.+.+.|++|+|++|++.
T Consensus 320 N~L~~lp~~~--l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~- 396 (1081)
T KOG0618|consen 320 NNLPSLPDNF--LAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN- 396 (1081)
T ss_pred ccccccchHH--HhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-
Confidence 9999998732 33333 3788888888885443223345678999999999999888888999999999999999998
Q ss_pred CCCh-hhccCCCCCeEeccCCcccccCCcchhhhhhhcccCCCCCCCCCCCCccceeeccccCCCcCCCCCCCCCCeeee
Q 001561 486 NIPP-WIGQMENLFYLDFSNNTLTGEIPKSLTELKSLISSNCTSSNPTASAGIPLYVKHNRSTNGLPYNQASSFPPSVFL 564 (1052)
Q Consensus 486 ~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~L 564 (1052)
.+|. .+.++..|+.|+||+|+++ .+|..+.++..|. +|..
T Consensus 397 ~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~--------------------------------------tL~a 437 (1081)
T KOG0618|consen 397 SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLH--------------------------------------TLRA 437 (1081)
T ss_pred cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhH--------------------------------------HHhh
Confidence 5554 6779999999999999999 6789988888883 4556
Q ss_pred ecCcccccCCcccccccccceecccCceeeec-CCCCcccccCcCeeeCCCCcCCCCCCccccCccccCeeeeccc
Q 001561 565 SNNRINGTIPPEIGQLKHLHVLDLSRNNITGT-IPSSISEIRNLEVLDLSSNDLHGSIPGSFEKLTFLSKFSVANN 639 (1052)
Q Consensus 565 s~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~-ip~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~l~l~~N 639 (1052)
.+|++. ..| ++.+++.|+.+|+|.|+|+-. +|..... ++|++|||++|.=.-..-+.|..++++..+++.-|
T Consensus 438 hsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 438 HSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred cCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCC-cccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 778887 667 899999999999999999843 3443333 89999999999843345567788888888888877
No 191
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.7e-34 Score=319.95 Aligned_cols=260 Identities=23% Similarity=0.385 Sum_probs=203.6
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC------CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCe
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT------NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGND 841 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 841 (1052)
..++|++.+.||+|+||.||+|..+ .+..||+|.+.... ......+.+|+.++++++||||+++++++.+++.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567999999999999999999653 24579999876443 2334567889999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcccC------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEE
Q 001561 842 RLLIYSYMENGSLDYWLHESVD------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHL 915 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl 915 (1052)
.++||||+++|+|.+++..... .....++..+..++.|++.|++|||+. +|+||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEE
Confidence 9999999999999999975321 123457788999999999999999986 9999999999999999999999
Q ss_pred eecccccccCCCCCee-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHh
Q 001561 916 ADFGLSRLLRPYDTHV-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQM 993 (1052)
Q Consensus 916 ~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 993 (1052)
+|||+++......... .....++..|+|||...+..++.++|||||||++|||++ |+.||... ...+....+..
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~---~~~~~~~~~~~- 236 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL---SNEQVLKFVMD- 236 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCC---CHHHHHHHHHc-
Confidence 9999998654322111 112345678999999988889999999999999999998 78898532 22222221111
Q ss_pred hhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 994 KSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
. .... .+......+.+++.+|++.+|++||++.|+++.|++.
T Consensus 237 --~-~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 237 --G-GYLD---------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred --C-CCCC---------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 0 0000 0111234789999999999999999999999998864
No 192
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4.2e-34 Score=316.12 Aligned_cols=255 Identities=26% Similarity=0.348 Sum_probs=201.4
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
.|+..++||+|+||.||+|... +++.||+|.+.... ......+..|+.++++++|++++++++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677889999999999999865 68899999886432 2223457789999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+++++|.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.++++|||++......
T Consensus 81 ~~~g~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 81 LMNGGDLKFHIYHM--GEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred ecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence 99999999988643 234588999999999999999999986 9999999999999999999999999999765432
Q ss_pred CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASI 1007 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
. ......|+..|+|||++.+..++.++||||+|+++|||++|+.||.........+.......... .
T Consensus 156 ~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~-----~------ 222 (285)
T cd05630 156 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ-----E------ 222 (285)
T ss_pred c--cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh-----h------
Confidence 2 12234789999999999988999999999999999999999999974322111111111110000 0
Q ss_pred cchhhHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH--HHhh
Q 001561 1008 WHKDREKQLLEMLEIACKCIDQDPRRRPF-----IEEVVT--WLDG 1046 (1052)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~--~L~~ 1046 (1052)
........++.+++.+|++.||++||+ +.|+++ ++++
T Consensus 223 --~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 223 --EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred --hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 011112346889999999999999999 888887 5443
No 193
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.4e-34 Score=320.10 Aligned_cols=262 Identities=25% Similarity=0.407 Sum_probs=202.8
Q ss_pred cCCcccCeEcccCceEEEEEEE-----CCCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC--CeE
Q 001561 771 NNFNQANIIGCGGFGLVYKATL-----TNGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG--NDR 842 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 842 (1052)
+.|++.+.||+|+||.||+|.+ .++..||+|.+.... ......+.+|++++++++|||++++++++.+. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 4578899999999999999974 257889999987553 34456789999999999999999999998775 568
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
++||||+++++|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++
T Consensus 84 ~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred EEEEEccCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccc
Confidence 8999999999999998653 23589999999999999999999986 99999999999999999999999999998
Q ss_pred ccCCCCCe--eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCC--------CCchhHHHHHHH
Q 001561 923 LLRPYDTH--VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKG--------KNCRDLVSWVFQ 992 (1052)
Q Consensus 923 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~--------~~~~~~~~~~~~ 992 (1052)
........ ......++..|+|||+..+..++.++||||||+++|||++++.|+..... ............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 76543221 12234567789999998888899999999999999999998776432100 000000111111
Q ss_pred hhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 993 MKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
....... .+.....+.++.+++.+|++.+|++||++.++++.|+++
T Consensus 238 ~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 VLEEGKR---------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHcCcc---------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1111000 001112345789999999999999999999999999876
No 194
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1e-34 Score=326.96 Aligned_cols=237 Identities=25% Similarity=0.352 Sum_probs=187.6
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHH-HHHhcCCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVE-ALSRAQHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
+.||+|+||+||+|... +|+.||+|++..... ....++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999875 789999999875321 22234445544 56788999999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~ 152 (323)
T cd05575 81 GELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKT 152 (323)
T ss_pred CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCc
Confidence 999988864 34688999999999999999999986 9999999999999999999999999998754222 222
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+....+. ... .. .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~---~~~~~~~~i~---~~~--~~-----~---- 215 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR---DTAEMYDNIL---NKP--LR-----L---- 215 (323)
T ss_pred cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC---CHHHHHHHHH---cCC--CC-----C----
Confidence 33457999999999999989999999999999999999999999632 1112211111 110 00 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHH
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRPFIE 1038 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RPs~~ 1038 (1052)
.......+.+++.+|++.||++||++.
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 216 KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 111234688999999999999999885
No 195
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.2e-34 Score=326.78 Aligned_cols=241 Identities=25% Similarity=0.314 Sum_probs=188.8
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHH-HHHHhcCCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEV-EALSRAQHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
+.||+|+||+||+|+.. +++.||+|++.... ......+..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999876 67889999987532 12223344444 456778999999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~ 152 (325)
T cd05602 81 GELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GT 152 (325)
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CC
Confidence 999998864 34577888899999999999999986 99999999999999999999999999997643222 22
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||... +..+....+... .. . .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~---~~~~~~~~i~~~----~~-~---------~ 215 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR---NTAEMYDNILNK----PL-Q---------L 215 (325)
T ss_pred cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCC---CHHHHHHHHHhC----Cc-C---------C
Confidence 33467999999999999999999999999999999999999999632 222222222111 00 0 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.......+.+++.+|++.+|.+||++.+.+.
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 216 KPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 1122346889999999999999998875443
No 196
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.3e-34 Score=312.21 Aligned_cols=248 Identities=27% Similarity=0.407 Sum_probs=197.8
Q ss_pred CeEcccCceEEEEEEEC-C---CcEEEEEEecCCch-hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-N---GTKAAVKRLSGDCG-QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~---g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
+.||+|+||.||+|.+. . +..||+|.+..... ...+++.+|+++++++.||||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46999999999999754 2 26899999875543 34567899999999999999999999876 4568999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++.........
T Consensus 80 ~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 80 GPLLKYLKKR----REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 9999999753 3689999999999999999999986 99999999999999999999999999998765433222
Q ss_pred eec--ccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 932 TTD--LVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 932 ~~~--~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
... ..++..|+|||...+..++.++||||||+++|||++ |+.||.... ..+...++.... . .
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~---~~~~~~~~~~~~---~-~-------- 217 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK---GAEVIAMLESGE---R-L-------- 217 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC---HHHHHHHHHcCC---c-C--------
Confidence 211 123467999999988899999999999999999998 999996432 222322221111 0 0
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
..+...+..+.+++.+|+..+|++||++.++++.|+++.
T Consensus 218 -~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 -PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred -CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 011122347889999999999999999999999999874
No 197
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.2e-34 Score=315.91 Aligned_cols=255 Identities=27% Similarity=0.471 Sum_probs=202.8
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CC---cEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NG---TKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
.+|++.+.||+|+||.||+|... ++ ..||+|.+.... .....+|..|+.++++++||||+++++++.++...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 35788999999999999999865 33 369999987542 34456799999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+++|+|.+++... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+....
T Consensus 84 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 84 TEFMENGALDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EecCCCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccc
Confidence 9999999999998753 34589999999999999999999986 99999999999999999999999999987654
Q ss_pred CCCCee--eeccc--ccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 926 PYDTHV--TTDLV--GTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 926 ~~~~~~--~~~~~--gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
...... ..... .+..|+|||+..+..++.++||||||+++||+++ |..||.... ..+...++....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~---~~~~~~~i~~~~------ 228 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS---NQDVINAIEQDY------ 228 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC---HHHHHHHHHcCC------
Confidence 322211 11111 2457999999998899999999999999999886 999986322 222333221110
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
.. +.....+..+.+++.+|++.+|.+||++.+++..|+++
T Consensus 229 ~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 RL-------PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cC-------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 00112234688999999999999999999999999865
No 198
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.5e-34 Score=312.64 Aligned_cols=239 Identities=24% Similarity=0.420 Sum_probs=189.0
Q ss_pred CeEcccCceEEEEEEECC-------------CcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEE
Q 001561 777 NIIGCGGFGLVYKATLTN-------------GTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRL 843 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~~-------------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 843 (1052)
+.||+|+||.||+|.+.+ ..+||+|.+..........+.+|+.+++.++||||+++++++.+....+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998542 2358899887655555567889999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCC-------eEEe
Q 001561 844 LIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFE-------AHLA 916 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~-------~kl~ 916 (1052)
+||||+++|+|..++.. ....+++..+.+++.|+++|++|||+. +|+||||||+||+++.++. ++++
T Consensus 81 lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 81 MVEEFVEFGPLDLFMHR---KSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEecccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeC
Confidence 99999999999988764 234689999999999999999999986 9999999999999987654 8999
Q ss_pred ecccccccCCCCCeeeecccccccccCccccC-CcCCCcccchHHHHHHHHHHH-cCCCCCcccCCCCchhHHHHHHHhh
Q 001561 917 DFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQ-TLTATCRGDVYSFGVVLLELL-TGRRPVEVCKGKNCRDLVSWVFQMK 994 (1052)
Q Consensus 917 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~ell-tG~~pf~~~~~~~~~~~~~~~~~~~ 994 (1052)
|||.+...... ....++..|+|||.+. +..++.++|||||||++|||+ +|+.||......+ ... ..
T Consensus 155 d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~----~~~---~~ 222 (262)
T cd05077 155 DPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE----KER---FY 222 (262)
T ss_pred CCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH----HHH---HH
Confidence 99998765322 2346788999999876 567889999999999999997 5888875321111 000 00
Q ss_pred hcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001561 995 SEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWL 1044 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1044 (1052)
... .... .+ ....+.+++.+|++.||++||++.++++.+
T Consensus 223 ~~~--~~~~-----~~----~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 223 EGQ--CMLV-----TP----SCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred hcC--ccCC-----CC----ChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 000 0000 01 123688999999999999999999999876
No 199
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2e-34 Score=319.61 Aligned_cols=258 Identities=29% Similarity=0.465 Sum_probs=204.4
Q ss_pred hcCCcccCeEcccCceEEEEEEEC------CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT------NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDR 842 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 842 (1052)
.++|+..+.||+|+||.||+|... ++..||+|++.... ....+++.+|+.++++++||||+++++++.+++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 457889999999999999999853 46789999987543 34456789999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhcccC------------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCc
Q 001561 843 LLIYSYMENGSLDYWLHESVD------------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSN 904 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~N 904 (1052)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence 999999999999999975321 123478899999999999999999986 99999999999
Q ss_pred eEECCCCCeEEeecccccccCCCCCe-eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCC
Q 001561 905 ILLDEKFEAHLADFGLSRLLRPYDTH-VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKN 982 (1052)
Q Consensus 905 ill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~ 982 (1052)
|++++++.++++|||.+..+...... ......+++.|+|||...+..++.++|||||||++|||++ |..||... .
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~---~ 237 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM---A 237 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---C
Confidence 99999999999999998765432211 1122345668999999888899999999999999999997 88888532 1
Q ss_pred chhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 983 CRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
..+....+ .. ..... .+...+.++.+++.+|++.+|++||++.|+++.|++
T Consensus 238 ~~~~~~~~---~~-~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 238 HEEVIYYV---RD-GNVLS---------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHHHH---hc-CCCCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 12222211 11 11100 011223478999999999999999999999999874
No 200
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.6e-34 Score=323.59 Aligned_cols=262 Identities=26% Similarity=0.400 Sum_probs=201.9
Q ss_pred cCCcccCeEcccCceEEEEEEE------CCCcEEEEEEecCCch-hhHHHHHHHHHHHHhc-CCCceeeeeceEeeC-Ce
Q 001561 771 NNFNQANIIGCGGFGLVYKATL------TNGTKAAVKRLSGDCG-QMEREFQAEVEALSRA-QHKNLVSLQGYCRHG-ND 841 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~~ 841 (1052)
++|++.+.||+|+||+||+|.+ .+++.||||+++.... .....+.+|+.++.++ +||||+++++++... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 5689999999999999999974 2467899999975432 3345688999999999 689999999988654 46
Q ss_pred EEEEEEeccCCChhhhhhcccC----------------------------------------------------------
Q 001561 842 RLLIYSYMENGSLDYWLHESVD---------------------------------------------------------- 863 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------------------- 863 (1052)
.++||||+++|+|.++++....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 7899999999999999864311
Q ss_pred -----CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe-eeecccc
Q 001561 864 -----KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH-VTTDLVG 937 (1052)
Q Consensus 864 -----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~g 937 (1052)
....+++..+..++.|+++|++|||+. +|+||||||+||++++++.+|++|||++......... ......+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 012478889999999999999999986 9999999999999999999999999999865332211 1122345
Q ss_pred cccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHH
Q 001561 938 TLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQL 1016 (1052)
Q Consensus 938 t~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1016 (1052)
++.|+|||...+..++.++||||||+++|||++ |..||...... ...... .. ....... + ....
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~---~~-~~~~~~~--~-------~~~~ 308 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRR---LK-EGTRMRA--P-------DYTT 308 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc--HHHHHH---Hh-ccCCCCC--C-------CCCC
Confidence 678999999988889999999999999999997 99998642211 111111 11 1110000 0 0112
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCcc
Q 001561 1017 LEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGID 1050 (1052)
Q Consensus 1017 ~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1050 (1052)
.++.+++.+|++.+|++||++.|+++.|+.+.++
T Consensus 309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 309 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 3688999999999999999999999999987653
No 201
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.7e-34 Score=323.38 Aligned_cols=241 Identities=24% Similarity=0.317 Sum_probs=192.7
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcC-CCceeeeeceEeeCCeEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 846 (1052)
+|+..+.||+|+||+||+|... +|+.||+|++.... ....+.+..|.+++..+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4777899999999999999865 68899999987542 223345778888888885 577888999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++.. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 81 EYVNGGDLMYHIQQ----VGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 99999999998864 34589999999999999999999986 999999999999999999999999999976432
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||... ........+.. ... .
T Consensus 154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~---~~~~~~~~i~~---~~~--~----- 219 (323)
T cd05615 154 DG-VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE---DEDELFQSIME---HNV--S----- 219 (323)
T ss_pred CC-ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCC---CHHHHHHHHHh---CCC--C-----
Confidence 21 1223457999999999999888999999999999999999999999642 22222222211 100 0
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFI 1037 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1037 (1052)
.+.....++.+++.+|++.+|.+|++.
T Consensus 220 ----~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 220 ----YPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ----CCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 011123467899999999999999985
No 202
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=8.5e-34 Score=311.14 Aligned_cols=254 Identities=26% Similarity=0.361 Sum_probs=192.4
Q ss_pred CeEcccCceEEEEEEECC---CcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCC
Q 001561 777 NIIGCGGFGLVYKATLTN---GTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENG 852 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~~---g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 852 (1052)
+.||+|+||.||+|.+.+ +..+|+|.++... ......+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999998653 4579999887544 334457889999999999999999999999999999999999999
Q ss_pred ChhhhhhcccC-CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 853 SLDYWLHESVD-KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 853 ~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
+|.++++.... .....++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999976432 223467788889999999999999986 99999999999999999999999999997543322211
Q ss_pred e-ecccccccccCccccCCc-------CCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccc
Q 001561 932 T-TDLVGTLGYIPPEYSQTL-------TATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI 1002 (1052)
Q Consensus 932 ~-~~~~gt~~y~aPE~~~~~-------~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
. ....+++.|+|||++... .++.++||||||+++|||++ |+.||..... .+...... . ......
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~---~~~~~~~~--~--~~~~~~ 230 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD---EQVLTYTV--R--EQQLKL 230 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHHh--h--cccCCC
Confidence 1 234577899999987542 35789999999999999996 9999964221 11111111 0 111111
Q ss_pred ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 1003 IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
.++.... .....+.+++.+|+ .+|++||+++||++.|+
T Consensus 231 ~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRLKL----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCccCC----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 2222111 12235788999998 68999999999999875
No 203
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=7.1e-34 Score=309.55 Aligned_cols=248 Identities=25% Similarity=0.389 Sum_probs=200.0
Q ss_pred CeEcccCceEEEEEEECC--C--cEEEEEEecCCch-hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLTN--G--TKAAVKRLSGDCG-QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
++||+|++|.||+|.+.+ + ..||+|.+..... ...+.+.+|++++++++||||+++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998643 3 3689999987665 566789999999999999999999999988 889999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++.........
T Consensus 80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 999999876432 5689999999999999999999986 99999999999999999999999999998765432211
Q ss_pred --eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 932 --TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 932 --~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||... ...+....... ..... .
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~---~~~~~~~~~~~---~~~~~--~----- 221 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL---SGSQILKKIDK---EGERL--E----- 221 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC---CHHHHHHHHHh---cCCcC--C-----
Confidence 122457789999999998899999999999999999998 99998632 22222222111 10000 0
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
.....+..+.+++.+|++.+|++||++.|+++.|.
T Consensus 222 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 222 --RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 01122347889999999999999999999999885
No 204
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=3.2e-34 Score=314.71 Aligned_cols=251 Identities=30% Similarity=0.472 Sum_probs=196.0
Q ss_pred CeEcccCceEEEEEEEC-CCc--EEEEEEecCCc-hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGT--KAAVKRLSGDC-GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
++||+|+||.||+|... ++. .+|+|.+.... ....+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999875 343 46888887433 34456788999999999 799999999999999999999999999
Q ss_pred CChhhhhhcccC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecc
Q 001561 852 GSLDYWLHESVD------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFG 919 (1052)
Q Consensus 852 g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG 919 (1052)
|+|.+++..... ....+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 999999875321 123578999999999999999999986 99999999999999999999999999
Q ss_pred cccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccc
Q 001561 920 LSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 920 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
++........ ......++.|+|||++....++.++||||||+++|||++ |..||... ...+..+.+. ...
T Consensus 158 l~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~---~~~~~~~~~~----~~~ 228 (270)
T cd05047 158 LSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM---TCAELYEKLP----QGY 228 (270)
T ss_pred Cccccchhhh--ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcccc---CHHHHHHHHh----CCC
Confidence 9864321111 111234567999999988889999999999999999997 99999632 2222222111 110
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 999 EVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
..+ .......++.+++.+|++.+|.+||++.|+++.|+++.
T Consensus 229 ~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 RLE---------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCC---------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 000 01112346889999999999999999999999998763
No 205
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=6.6e-34 Score=314.62 Aligned_cols=250 Identities=26% Similarity=0.338 Sum_probs=198.0
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
|+..+.||+|+||+||+|... +++.||+|.+.... ......+.+|++++++++|++|+++.+++.+++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 677889999999999999865 78899999986542 22234577899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++++|.+++... ....+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 82 MNGGDLKFHIYNM--GNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred ccCccHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 9999999888653 234689999999999999999999986 99999999999999999999999999997653221
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
......|+..|+|||++.+..++.++|+||+|+++|||++|+.||............ ........ .
T Consensus 157 --~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~--~~~~~~~~---~------- 222 (285)
T cd05632 157 --SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEV--DRRVLETE---E------- 222 (285)
T ss_pred --cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHhhhccc---c-------
Confidence 123457899999999998888999999999999999999999999642211111111 01111000 0
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPF-----IEEVVT 1042 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1042 (1052)
.........+.+++.+|++.+|++||+ ++++++
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 223 -VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred -ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 011122346789999999999999999 667766
No 206
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.8e-34 Score=310.47 Aligned_cols=248 Identities=27% Similarity=0.380 Sum_probs=199.1
Q ss_pred CeEcccCceEEEEEEECCCcEEEEEEecCCchh-hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCChh
Q 001561 777 NIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQ-MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSLD 855 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 855 (1052)
++||+|+||.||+|...+++.||+|++...... ....+..|++++++++||||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 469999999999999877999999998765443 4567899999999999999999999999999999999999999999
Q ss_pred hhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeee-ec
Q 001561 856 YWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVT-TD 934 (1052)
Q Consensus 856 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~-~~ 934 (1052)
+++... ...+++..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||.+........... ..
T Consensus 81 ~~l~~~---~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 81 TFLRKK---KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 998653 34578999999999999999999986 999999999999999999999999999986542221111 11
Q ss_pred ccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhH
Q 001561 935 LVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDRE 1013 (1052)
Q Consensus 935 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1052)
..++..|+|||.+.+..++.++||||||+++|||++ |..||..... ......+. ... .. ..+.
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~---~~~~~~~~----~~~--~~-------~~~~ 218 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN---QQTRERIE----SGY--RM-------PAPQ 218 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH---HHHHHHHh----cCC--CC-------CCCc
Confidence 234567999999888889999999999999999999 8999864321 11111111 000 00 0111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 1014 KQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 1014 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
..+.++.+++.+|++.+|.+||++.|+++.|+.
T Consensus 219 ~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 219 LCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred cCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 223478999999999999999999999999863
No 207
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=5.2e-34 Score=316.27 Aligned_cols=260 Identities=24% Similarity=0.304 Sum_probs=193.9
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch--hhHHHHHHHHHHHHhc---CCCceeeeeceEee-----CC
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG--QMEREFQAEVEALSRA---QHKNLVSLQGYCRH-----GN 840 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~~ 840 (1052)
+|++.+.||+|+||+||+|... +++.||+|.++.... .....+.+|+++++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999865 688999998875321 1223456677776665 79999999998864 24
Q ss_pred eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccc
Q 001561 841 DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGL 920 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~ 920 (1052)
..++||||+++ +|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKV--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred eEEEEEccccc-CHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 57899999975 788887653 234589999999999999999999986 999999999999999999999999999
Q ss_pred ccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 921 SRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 921 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
++...... ......||+.|+|||++.+..++.++||||+||++|||++|++||.... ..+....+..........
T Consensus 155 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~---~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07863 155 ARIYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS---EADQLGKIFDLIGLPPED 229 (288)
T ss_pred cccccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCC---HHHHHHHHHHHhCCCChh
Confidence 98764321 2234578999999999988889999999999999999999999996422 122222222211100000
Q ss_pred c----------cccccc---cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1001 E----------IIDASI---WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1001 ~----------~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
. ...+.. ...........+.+++.+|+++||++||++.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 230 DWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 000000 00111123456789999999999999999999875
No 208
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=4.9e-34 Score=316.11 Aligned_cols=262 Identities=27% Similarity=0.398 Sum_probs=203.4
Q ss_pred HHHHHHhhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhc-CCCceeeeeceEe---
Q 001561 763 VSDLLKSTNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRA-QHKNLVSLQGYCR--- 837 (1052)
Q Consensus 763 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~--- 837 (1052)
++++..+.++|++.+.||+|+||.||+|... +++.+|+|++.... ....++..|+.+++++ +||||+++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 4455567789999999999999999999865 67899999876432 2345678899999999 6999999999874
Q ss_pred --eCCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEE
Q 001561 838 --HGNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHL 915 (1052)
Q Consensus 838 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl 915 (1052)
.++..++||||+++++|.+++.........+++..+..++.|+++|+.|||+. +|+||||||+||++++++.+++
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl 165 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKL 165 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEE
Confidence 34568999999999999998875544456789999999999999999999986 9999999999999999999999
Q ss_pred eecccccccCCCCCeeeecccccccccCccccC-----CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHH
Q 001561 916 ADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQ-----TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWV 990 (1052)
Q Consensus 916 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~ 990 (1052)
+|||+++....... ......|++.|+|||++. ...++.++||||+||++|||++|+.||..... ....
T Consensus 166 ~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~--~~~~---- 238 (286)
T cd06638 166 VDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP--MRAL---- 238 (286)
T ss_pred ccCCceeecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch--hHHH----
Confidence 99999987643221 222346899999999874 34578899999999999999999999864221 1111
Q ss_pred HHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001561 991 FQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTW 1043 (1052)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1043 (1052)
..... .......++. ....++.+++.+|++.+|++||++.|+++-
T Consensus 239 ~~~~~-~~~~~~~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 239 FKIPR-NPPPTLHQPE-------LWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred hhccc-cCCCcccCCC-------CcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 11100 0001111111 122368899999999999999999999873
No 209
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.9e-34 Score=325.87 Aligned_cols=258 Identities=25% Similarity=0.311 Sum_probs=194.9
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCC------
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGN------ 840 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 840 (1052)
.++|++.+.||+|+||.||+|... +|..||+|++.... ......+.+|+.+++.++||||+++++++...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 468999999999999999999865 68999999986432 334456789999999999999999999986443
Q ss_pred eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccc
Q 001561 841 DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGL 920 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~ 920 (1052)
..++||||+++ ++.+.++. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred eeEEEEeCCCc-CHHHHHhc------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCC
Confidence 47999999976 45554432 377888999999999999999986 999999999999999999999999999
Q ss_pred ccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhh------
Q 001561 921 SRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMK------ 994 (1052)
Q Consensus 921 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~------ 994 (1052)
++.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+.........
T Consensus 170 a~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~---~~~~~~~~~~~~~~~~~~ 244 (359)
T cd07876 170 ARTACT--NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD---HIDQWNKVIEQLGTPSAE 244 (359)
T ss_pred cccccc--CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHhcCCCcHH
Confidence 976432 222334578999999999999999999999999999999999999996432 111111111000
Q ss_pred -------------hccccc------ccccccccc---hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 995 -------------SEKREV------EIIDASIWH---KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 995 -------------~~~~~~------~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...... +........ ........++.+++.+|++.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 245 FMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000 000000000 001112346889999999999999999999998
No 210
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.1e-34 Score=327.10 Aligned_cols=239 Identities=27% Similarity=0.366 Sum_probs=188.4
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHH-HHHhcCCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVE-ALSRAQHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
+.||+|+||+||+|+.. +|+.||+|++.... .....++..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999865 78999999987542 222344555554 46778999999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|..++.. ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~ 152 (325)
T cd05604 81 GELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-DT 152 (325)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-CC
Confidence 999888763 44689999999999999999999986 99999999999999999999999999987543221 22
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+....+. .. . . ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~---~~~~~~~~~~---~~-~-~-~~~------- 216 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR---DVAEMYDNIL---HK-P-L-VLR------- 216 (325)
T ss_pred cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC---CHHHHHHHHH---cC-C-c-cCC-------
Confidence 33457999999999999999999999999999999999999999632 1112221111 11 0 0 001
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRPFIEEV 1040 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev 1040 (1052)
......+.+++.+|++.+|.+||++.+.
T Consensus 217 -~~~~~~~~~ll~~ll~~~p~~R~~~~~~ 244 (325)
T cd05604 217 -PGASLTAWSILEELLEKDRQRRLGAKED 244 (325)
T ss_pred -CCCCHHHHHHHHHHhccCHHhcCCCCCC
Confidence 1123467899999999999999988643
No 211
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.5e-34 Score=321.52 Aligned_cols=260 Identities=25% Similarity=0.399 Sum_probs=204.5
Q ss_pred cCCcccCeEcccCceEEEEEEEC--------CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCC
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT--------NGTKAAVKRLSGDC-GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGN 840 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 840 (1052)
++|.+.+.||+|+||.||+|... ....||+|.+.... .....++..|+++++++ +||||+++++++.+..
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46888999999999999999742 24568999887543 33445688999999999 6999999999999988
Q ss_pred eEEEEEEeccCCChhhhhhcccC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC
Q 001561 841 DRLLIYSYMENGSLDYWLHESVD------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD 908 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~ 908 (1052)
..++||||+++|+|.+++..... ....+++.++..++.|++.|++|||+. +|+||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEc
Confidence 99999999999999999976421 234589999999999999999999986 999999999999999
Q ss_pred CCCCeEEeecccccccCCCCCee-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhH
Q 001561 909 EKFEAHLADFGLSRLLRPYDTHV-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDL 986 (1052)
Q Consensus 909 ~~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~ 986 (1052)
+++.+|++|||.++......... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ..+.
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~---~~~~ 245 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP---VEEL 245 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC---HHHH
Confidence 99999999999998764322111 111234567999999988889999999999999999999 899986322 2222
Q ss_pred HHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 987 VSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
..... ....... ......++.+++.+|++.+|++||++.|+++.|+++..
T Consensus 246 ~~~~~----~~~~~~~---------~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 246 FKLLR----EGHRMDK---------PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred HHHHH----cCCCCCC---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 22111 1111110 11223468899999999999999999999999988753
No 212
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=4.4e-34 Score=316.34 Aligned_cols=262 Identities=23% Similarity=0.316 Sum_probs=197.6
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|++.+.||+|++|.||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4788899999999999999865 68999999986432 22345688999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
++ ++|.+++.... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLP-KGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred CC-CCHHHHHhcCC-CCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 97 58888876533 245689999999999999999999986 99999999999999999999999999997654322
Q ss_pred CeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccc--------
Q 001561 929 THVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKRE-------- 999 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------- 999 (1052)
.......+++.|+|||++.+ ..++.++||||||+++|||++|++||..... ....... .........
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSE--IDQLFRI-FRILGTPTEDVWPGVTS 231 (285)
T ss_pred -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHH-HHHhCCCChhhhhcchh
Confidence 22233467889999997765 4578899999999999999999999964211 1111111 000000000
Q ss_pred ----cccccc---cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1000 ----VEIIDA---SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1000 ----~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
....+. ............++.+++.+|++.||++|||+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 232 LPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000 0000001113457789999999999999999999875
No 213
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.1e-34 Score=316.53 Aligned_cols=252 Identities=25% Similarity=0.415 Sum_probs=198.0
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhc-CCCceeeeeceEeeC------C
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRA-QHKNLVSLQGYCRHG------N 840 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------~ 840 (1052)
+.+.|+..+.||+|+||.||+|... +++.||+|++.... .....+..|+.+++++ +||||+++++++... .
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 4567888999999999999999865 67899999986543 3345688999999998 799999999998753 4
Q ss_pred eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccc
Q 001561 841 DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGL 920 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~ 920 (1052)
..++||||+++++|.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCC
Confidence 578999999999999998753 234688999999999999999999986 999999999999999999999999999
Q ss_pred ccccCCCCCeeeecccccccccCccccC-----CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhh
Q 001561 921 SRLLRPYDTHVTTDLVGTLGYIPPEYSQ-----TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKS 995 (1052)
Q Consensus 921 a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 995 (1052)
+........ ......|++.|+|||++. ...++.++|||||||++|||++|+.||..... .. .. ....
T Consensus 158 ~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~---~~--~~-~~~~- 229 (272)
T cd06637 158 SAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP---MR--AL-FLIP- 229 (272)
T ss_pred ceecccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH---HH--HH-HHHh-
Confidence 986543222 223457899999999875 34678899999999999999999999953211 11 11 1111
Q ss_pred cccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 996 EKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
........ .......+.+++.+|++.+|.+||++.|+++
T Consensus 230 ~~~~~~~~--------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 230 RNPAPRLK--------SKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred cCCCCCCC--------CCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 01111111 1112346889999999999999999999975
No 214
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.6e-34 Score=320.70 Aligned_cols=267 Identities=22% Similarity=0.351 Sum_probs=202.1
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
++|++.+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++.+++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56889999999999999999865 68899999986443 22334577899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
++ ++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 86 ~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 86 LD-KDLKQYLDDC---GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 97 5888887653 34578999999999999999999986 99999999999999999999999999997643222
Q ss_pred CeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc---cccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR---EVEIID 1004 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 1004 (1052)
.......+++.|+|||++.+ ..++.++|||||||++|||++|++||.... ..+....+........ .....+
T Consensus 159 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
T cd07873 159 -KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST---VEEQLHFIFRILGTPTEETWPGILS 234 (301)
T ss_pred -CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHHcCCCChhhchhhhc
Confidence 12223467889999998754 457889999999999999999999996432 2222222221111100 000000
Q ss_pred ---------ccccc----hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcC
Q 001561 1005 ---------ASIWH----KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIG 1048 (1052)
Q Consensus 1005 ---------~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~ 1048 (1052)
+.... .........+.+++.+|++.||++|||++|+++ +++.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 235 NEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred cccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 00000 001122346789999999999999999999998 665554
No 215
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=9.8e-34 Score=312.98 Aligned_cols=249 Identities=22% Similarity=0.352 Sum_probs=199.1
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
|++.+.||+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++|||++++++++..++..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 667788999999999999876 5778899998766555566788999999999999999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
++|..++.. ....+++..+..++.|+++||+|||+. +++||||||+||+++.++.+|++|||++....... ..
T Consensus 87 ~~l~~~~~~---~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~ 159 (282)
T cd06643 87 GAVDAVMLE---LERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QR 159 (282)
T ss_pred CcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc-cc
Confidence 999888764 234689999999999999999999986 99999999999999999999999999987653221 22
Q ss_pred eecccccccccCccccC-----CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 932 TTDLVGTLGYIPPEYSQ-----TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.....+++.|+|||++. +..++.++|||||||++|||++|++||.... ..+.. ......... ....
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~---~~~~~---~~~~~~~~~-~~~~-- 230 (282)
T cd06643 160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN---PMRVL---LKIAKSEPP-TLAQ-- 230 (282)
T ss_pred cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC---HHHHH---HHHhhcCCC-CCCC--
Confidence 23457899999999873 4457789999999999999999999986321 11111 111111100 0101
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+.....++.+++.+|++.+|.+||++.++++
T Consensus 231 -----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 231 -----PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred -----ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1122347889999999999999999999986
No 216
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4.9e-34 Score=312.87 Aligned_cols=254 Identities=23% Similarity=0.356 Sum_probs=199.4
Q ss_pred HhhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 768 KSTNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 768 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
.++..+.....||+|+||.||+|... ++..||+|.+........+.+.+|++++++++|+||+++++++..++..++|+
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 34455666778999999999999855 67889999988766666678999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCcccc--CHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC-CCCeEEeecccccc
Q 001561 847 SYMENGSLDYWLHESVDKDSVL--KWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE-KFEAHLADFGLSRL 923 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~-~~~~kl~DfG~a~~ 923 (1052)
||+++++|.+++.... ..+ ++..+..++.|+++|++|||+. +|+||||||+||+++. ++.++|+|||.+..
T Consensus 85 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 85 EQVPGGSLSALLRSKW---GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred ecCCCCCHHHHHHHhc---ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999999999987532 234 7888899999999999999986 9999999999999986 67999999999976
Q ss_pred cCCCCCeeeecccccccccCccccCCc--CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccc
Q 001561 924 LRPYDTHVTTDLVGTLGYIPPEYSQTL--TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVE 1001 (1052)
Q Consensus 924 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1052)
...... ......|++.|+|||+.... .++.++||||||+++|+|++|+.||....... ...+....... .
T Consensus 159 ~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~---~~~~~~~~~~~--~-- 230 (268)
T cd06624 159 LAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ---AAMFKVGMFKI--H-- 230 (268)
T ss_pred cccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh---hhHhhhhhhcc--C--
Confidence 543221 22234688999999987654 37889999999999999999999986321111 11110000000 0
Q ss_pred cccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1002 IIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+ ..+.....++.+++.+|++.+|.+||++.|+++
T Consensus 231 ---~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 231 ---P----EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ---C----CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 0 011123346889999999999999999999975
No 217
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=9.7e-34 Score=311.85 Aligned_cols=257 Identities=25% Similarity=0.411 Sum_probs=204.0
Q ss_pred cCCcccCeEcccCceEEEEEEEC------CCcEEEEEEecCCchh-hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT------NGTKAAVKRLSGDCGQ-MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRL 843 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 843 (1052)
++|+..+.||+|+||.||+|+.. +...||+|.+...... ...++.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56888999999999999999864 2457999988654433 4567899999999999999999999999989999
Q ss_pred EEEEeccCCChhhhhhcccCCc-----cccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeec
Q 001561 844 LIYSYMENGSLDYWLHESVDKD-----SVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADF 918 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~Df 918 (1052)
+||||+++|+|.+++....... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997643221 2689999999999999999999986 9999999999999999999999999
Q ss_pred ccccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcc
Q 001561 919 GLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEK 997 (1052)
Q Consensus 919 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
|++...............+++.|+|||.+.+..++.++||||||+++|+|++ |..||.... ....+..... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~---~~~~~~~~~~----~ 234 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS---DEEVLNRLQA----G 234 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc---hHHHHHHHHc----C
Confidence 9987543322222333466778999999888888999999999999999998 888985321 1222222111 1
Q ss_pred cccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 998 REVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 998 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
... .. .....+..+.+++.+|++.+|++||++.|+++.|+
T Consensus 235 ~~~-~~-------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 235 KLE-LP-------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CcC-CC-------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 100 00 01112347889999999999999999999999875
No 218
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.9e-34 Score=310.55 Aligned_cols=249 Identities=27% Similarity=0.426 Sum_probs=203.2
Q ss_pred cCCcccCeEcccCceEEEEEEECC-CcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTN-GTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
++|+..+.||+|+||.||+|...+ +..||+|.+..... .+++.+|++++++++||||+++++++.++...++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 568889999999999999998764 78999999875533 578999999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++.. ....+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (256)
T cd06612 81 GAGSVSDIMKI---TNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA 154 (256)
T ss_pred CCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence 99999999864 245689999999999999999999986 999999999999999999999999999987653321
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......|+..|+|||++.+..++.++||||||+++|+|++|+.||...... .. ...... ... . ..
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~--~~----~~~~~~-~~~-----~--~~ 219 (256)
T cd06612 155 -KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM--RA----IFMIPN-KPP-----P--TL 219 (256)
T ss_pred -ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh--hh----hhhhcc-CCC-----C--CC
Confidence 223346888999999998889999999999999999999999998632111 00 000000 000 0 01
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.........+.+++.+|++.+|++||++.|+++
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 112223347899999999999999999999986
No 219
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.1e-34 Score=328.97 Aligned_cols=260 Identities=21% Similarity=0.259 Sum_probs=199.8
Q ss_pred hcCCcccCeEcccCceEEEEEEEC---CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT---NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
..+|++.+.||+|+||.||+|... .+.+||+|.+... +...+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 357999999999999999999753 3578999987643 23568999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
|++. ++|.+++. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++....
T Consensus 166 e~~~-~~l~~~l~----~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 166 PKYK-CDLFTYVD----RSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237 (392)
T ss_pred hhcC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence 9996 57877774 345689999999999999999999986 999999999999999999999999999987654
Q ss_pred CCC-eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccc---
Q 001561 927 YDT-HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI--- 1002 (1052)
Q Consensus 927 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 1002 (1052)
... .......||+.|+|||++....++.++|||||||++|||++|+.||..............+............
T Consensus 238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 317 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNG 317 (392)
T ss_pred ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCcc
Confidence 322 2223467999999999999989999999999999999999999999754433222222222221111000000
Q ss_pred --------------ccccccc-h--hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1003 --------------IDASIWH-K--DREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1003 --------------~~~~~~~-~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..+.... . .......++.+++.+|+..||++||++.|++.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 318 STNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred chhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000000 0 00012346788999999999999999999987
No 220
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=4e-34 Score=313.83 Aligned_cols=256 Identities=23% Similarity=0.354 Sum_probs=202.9
Q ss_pred CCcccCeEcccCceEEEEEEECC--CcEEEEEEecCC----------chhhHHHHHHHHHHHHh-cCCCceeeeeceEee
Q 001561 772 NFNQANIIGCGGFGLVYKATLTN--GTKAAVKRLSGD----------CGQMEREFQAEVEALSR-AQHKNLVSLQGYCRH 838 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~~--g~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 838 (1052)
+|++.+.||+|+||.||+|.... ++.+|+|.+... ......++..|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788899999999999998764 678999987532 12233456778888875 699999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeec
Q 001561 839 GNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADF 918 (1052)
Q Consensus 839 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~Df 918 (1052)
++..++||||+++++|.+++.........+++..++.++.|++.|+.|||+. .+++||||+|+||+++.++.++++||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecc
Confidence 9999999999999999998865444556789999999999999999999963 48999999999999999999999999
Q ss_pred ccccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc
Q 001561 919 GLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 919 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
|.+....... ......|+..|+|||...+..++.++||||||+++|||++|+.||... ...... ........
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~---~~~~~~---~~~~~~~~ 230 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST---NMLSLA---TKIVEAVY 230 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc---CHHHHH---HHHhhccC
Confidence 9998754432 334457899999999998888999999999999999999999998531 111111 11111110
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 999 EVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
... ........+.+++.+|++.||++||++.|+.+++++
T Consensus 231 -~~~--------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 231 -EPL--------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred -CcC--------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 000 001123468899999999999999999999998864
No 221
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.1e-33 Score=308.54 Aligned_cols=250 Identities=31% Similarity=0.482 Sum_probs=203.7
Q ss_pred CeEcccCceEEEEEEECC----CcEEEEEEecCCchhh-HHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLTN----GTKAAVKRLSGDCGQM-EREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
+.||+|+||.||+|.... +..||+|.+....... .+++.+|++.+++++|+|++++++++.+....++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999998763 7889999988654333 57789999999999999999999999999999999999999
Q ss_pred CChhhhhhcccCC-----ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 852 GSLDYWLHESVDK-----DSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 852 g~L~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
++|.+++...... ...+++..++.++.|++.|++|||+. +++||||||+||++++++.++++|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999864222 46789999999999999999999986 999999999999999999999999999987654
Q ss_pred CCC-eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 927 YDT-HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 927 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
... .......+++.|+|||......++.++||||+|+++|||++ |+.||... ...+..+.+.. ....
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~---~~~~~~~~~~~----~~~~---- 226 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL---SNEEVLEYLRK----GYRL---- 226 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC---CHHHHHHHHHc----CCCC----
Confidence 321 12233467889999999888889999999999999999999 69999643 22222222211 1000
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
..+...+.++.+++.+|++.+|++||++.|+++.|+
T Consensus 227 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 -----PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -----CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111122457899999999999999999999999874
No 222
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.1e-34 Score=328.14 Aligned_cols=251 Identities=23% Similarity=0.299 Sum_probs=195.7
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|+..+.||+|+||+||+|... +++.||+|++.... ......+.+|++++..++||+|+++++++.+++..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999865 68999999987432 223456788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 81 EFLPGGDMMTLLMK----KDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred eCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999999864 34588999999999999999999986 999999999999999999999999999875432
Q ss_pred CCC----------------------------------eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCC
Q 001561 927 YDT----------------------------------HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGR 972 (1052)
Q Consensus 927 ~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~ 972 (1052)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 110 0012357999999999999999999999999999999999999
Q ss_pred CCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 001561 973 RPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPF---IEEVVT 1042 (1052)
Q Consensus 973 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 1042 (1052)
.||.... .......+. .......+ .+. .....++.+++.+|+. +|++|++ +.|+++
T Consensus 234 ~Pf~~~~---~~~~~~~i~---~~~~~~~~-p~~------~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 234 PPFCSET---PQETYRKVM---NWKETLVF-PPE------VPISEKAKDLILRFCT-DSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCCCC---HHHHHHHHH---cCCCceec-CCC------CCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence 9996422 111111111 10000011 110 0122367788888764 9999985 566655
No 223
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=4.8e-34 Score=322.74 Aligned_cols=254 Identities=24% Similarity=0.282 Sum_probs=196.2
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||+||+++.. +++.||+|++.+.. ......+.+|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36889999999999999999876 57789999986422 122345788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 ey~~~g~L~~~l~~~---~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred eccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 999999999999752 34588999999999999999999986 999999999999999999999999999976543
Q ss_pred CCCeeeecccccccccCccccC-----CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQ-----TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVE 1001 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1052)
.........+||+.|+|||++. ...++.++|||||||++|||++|+.||... +..+... ..........
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~---~~~~~~~---~i~~~~~~~~ 228 (332)
T cd05623 155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE---SLVETYG---KIMNHKERFQ 228 (332)
T ss_pred CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC---CHHHHHH---HHhCCCcccc
Confidence 3333333457999999999875 346788999999999999999999999632 1111111 1111111000
Q ss_pred cccccccchhhHHHHHHHHHHHHHcccCCCC--CCCCHHHHHH
Q 001561 1002 IIDASIWHKDREKQLLEMLEIACKCIDQDPR--RRPFIEEVVT 1042 (1052)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~--~RPs~~evl~ 1042 (1052)
+ + ........++.+++.+|+..++. .|+++.|+++
T Consensus 229 ~--p----~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 229 F--P----AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ 265 (332)
T ss_pred C--C----CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence 0 0 00112344688899998865444 4789999876
No 224
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.1e-33 Score=318.26 Aligned_cols=261 Identities=23% Similarity=0.314 Sum_probs=188.4
Q ss_pred cCeEcccCceEEEEEEEC---CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEee--CCeEEEEEEecc
Q 001561 776 ANIIGCGGFGLVYKATLT---NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRH--GNDRLLIYSYME 850 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 850 (1052)
.+.||+|+||+||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 467999999999999864 45789999987543 23457889999999999999999998854 456789999986
Q ss_pred CCChhhhhhccc-----CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEE----CCCCCeEEeecccc
Q 001561 851 NGSLDYWLHESV-----DKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILL----DEKFEAHLADFGLS 921 (1052)
Q Consensus 851 ~g~L~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill----~~~~~~kl~DfG~a 921 (1052)
+ +|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 4 7777765322 1233588999999999999999999986 99999999999999 46689999999999
Q ss_pred cccCCCCC--eeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCC------chhHHHHHHH
Q 001561 922 RLLRPYDT--HVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKN------CRDLVSWVFQ 992 (1052)
Q Consensus 922 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~------~~~~~~~~~~ 992 (1052)
+....... .......||+.|+|||++.+ ..++.++||||+||++|||++|++||....... ..+....+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 239 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHH
Confidence 87643221 12234678999999998866 458899999999999999999999996432110 1111222221
Q ss_pred hhhccccccc---------------ccccccc-----hh----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 993 MKSEKREVEI---------------IDASIWH-----KD----REKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 993 ~~~~~~~~~~---------------~~~~~~~-----~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.......... ....... .. ......++.+++.+|++.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 240 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred hcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1110000000 0000000 00 0001235789999999999999999999985
No 225
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.4e-34 Score=323.69 Aligned_cols=192 Identities=22% Similarity=0.318 Sum_probs=164.3
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
...+|++.+.||+|+||.||+|... +++.||+|..... ....|+.++++++||||+++++++.++...++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3457999999999999999999876 5678999975432 23568999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+. ++|.+++.. ....+++..+..|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++.....
T Consensus 138 ~~~-~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 210 (357)
T PHA03209 138 HYS-SDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA 210 (357)
T ss_pred ccC-CcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccC
Confidence 995 578887764 345689999999999999999999986 9999999999999999999999999999753321
Q ss_pred CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCC
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPV 975 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf 975 (1052)
.......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 211 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 --PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred --cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1223457999999999999989999999999999999999855544
No 226
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.3e-34 Score=317.14 Aligned_cols=263 Identities=25% Similarity=0.414 Sum_probs=205.6
Q ss_pred cCCcccCeEcccCceEEEEEEEC-----CCcEEEEEEecCCchh-hHHHHHHHHHHHHhcCCCceeeeeceEee--CCeE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-----NGTKAAVKRLSGDCGQ-MEREFQAEVEALSRAQHKNLVSLQGYCRH--GNDR 842 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 842 (1052)
++|+..+.||+|+||.||+|.+. ++..||+|++...... ..+++.+|++++++++||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 46778899999999999999864 3678999998765443 46779999999999999999999999877 5578
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+.
T Consensus 84 ~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred EEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccc
Confidence 9999999999999999753 23589999999999999999999986 99999999999999999999999999998
Q ss_pred ccCCCCCee--eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCch--------hHHHHHHH
Q 001561 923 LLRPYDTHV--TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCR--------DLVSWVFQ 992 (1052)
Q Consensus 923 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~--------~~~~~~~~ 992 (1052)
......... .....++..|+|||...+..++.++||||||+++|||++|+.|+......... ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 765332211 11234556799999988888999999999999999999999998542211100 00111111
Q ss_pred hhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 993 MKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
...... ..........++.+++.+|++.+|++||++.|++++|+++.
T Consensus 238 ~~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 238 LLKEGE---------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HHHcCC---------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 111100 00111122357899999999999999999999999999874
No 227
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=4.7e-34 Score=313.74 Aligned_cols=239 Identities=23% Similarity=0.393 Sum_probs=187.7
Q ss_pred eEcccCceEEEEEEECC-------------------------CcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeee
Q 001561 778 IIGCGGFGLVYKATLTN-------------------------GTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSL 832 (1052)
Q Consensus 778 ~lG~G~~g~Vy~~~~~~-------------------------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 832 (1052)
.||+|+||.||+|.+.. ...||+|++.........++.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999997421 13588998876555555678899999999999999999
Q ss_pred eceEeeCCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCC-
Q 001561 833 QGYCRHGNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKF- 911 (1052)
Q Consensus 833 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~- 911 (1052)
++++.++...++||||+++|+|..++.. ....+++..+..++.|+++||+|||+. +|+||||||+||++++++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK---EKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCc
Confidence 9999999999999999999999998864 244688999999999999999999985 999999999999998643
Q ss_pred ------CeEEeecccccccCCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHH-HcCCCCCcccCCCCc
Q 001561 912 ------EAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLEL-LTGRRPVEVCKGKNC 983 (1052)
Q Consensus 912 ------~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~el-ltG~~pf~~~~~~~~ 983 (1052)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++||+ ++|+.||......+
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~- 229 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE- 229 (274)
T ss_pred ccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH-
Confidence 4899999998654321 12357789999997765 5689999999999999998 47999986432211
Q ss_pred hhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 984 RDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
.. ...... .. .. .. ....+.+++.+|++.+|++||++.++++.|+
T Consensus 230 --~~-~~~~~~--~~---~~-----~~----~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 --KE-RFYEKK--HR---LP-----EP----SCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred --HH-HHHHhc--cC---CC-----CC----CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11 111100 00 00 00 1136889999999999999999999999874
No 228
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.7e-34 Score=322.51 Aligned_cols=254 Identities=24% Similarity=0.282 Sum_probs=197.0
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||+||+|+.. +++.||+|++.+.. ......+.+|..++..++|++|+++++++.+++..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46889999999999999999866 67889999986422 223345788999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 Ey~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred eCCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999999752 34688999999999999999999986 999999999999999999999999999987654
Q ss_pred CCCeeeecccccccccCccccCC-----cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQT-----LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVE 1001 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1052)
..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||... +..+....+. .......
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~---~~~~~~~~i~---~~~~~~~ 228 (331)
T cd05624 155 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE---SLVETYGKIM---NHEERFQ 228 (331)
T ss_pred CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC---CHHHHHHHHH---cCCCccc
Confidence 33333334579999999998765 46788999999999999999999999632 1111111111 1100000
Q ss_pred cccccccchhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 001561 1002 IIDASIWHKDREKQLLEMLEIACKCIDQDPRR--RPFIEEVVT 1042 (1052)
Q Consensus 1002 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 1042 (1052)
. .. .....+.++.+++.+|+..++++ |++++++++
T Consensus 229 ~-p~-----~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 229 F-PS-----HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred C-CC-----ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 0 00 01122347889999998865544 468888865
No 229
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.5e-34 Score=314.74 Aligned_cols=255 Identities=25% Similarity=0.393 Sum_probs=203.6
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
.+|++.+.||+|+||+||+|... +|..||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46788899999999999999865 68899999876443 34567789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++++|.+++.. .+.+++..+..++.+++.|+.|||+. .+++||||||+||++++++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 85 MDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred CCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 999999988864 34689999999999999999999973 38999999999999999999999999998754321
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCC-----CchhHHHHHHHhhhcccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGK-----NCRDLVSWVFQMKSEKREVEII 1003 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
......|+..|+|||++.+..++.++|||||||++|++++|+.||...... .......+........ .
T Consensus 158 --~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---- 230 (284)
T cd06620 158 --IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-P---- 230 (284)
T ss_pred --ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-C----
Confidence 122357899999999988888999999999999999999999999754321 1111122221111110 0
Q ss_pred cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001561 1004 DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTW 1043 (1052)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1043 (1052)
+... .......+.+++.+|++.||++||++.|+++.
T Consensus 231 -~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 231 -PRLP---SSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred -CCCC---chhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000 11133468899999999999999999999985
No 230
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.9e-34 Score=315.22 Aligned_cols=249 Identities=21% Similarity=0.375 Sum_probs=203.2
Q ss_pred cCCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
++|++.+.||.|++|.||+|.. .+++.||+|.+........+.+.+|+++++.++|||++++++++.+++..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4689999999999999999985 478999999987655555677899999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++.. ..+++.++..++.+++.|++|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 99 AGGSLTDVVTE-----TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred CCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 99999998853 3478999999999999999999996 999999999999999999999999999886543322
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......|++.|+|||.+.+..++.++|||||||++|+|++|+.||.... ..... ....... .....
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~---~~~~~---~~~~~~~-~~~~~------ 236 (296)
T cd06655 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN---PLRAL---YLIATNG-TPELQ------ 236 (296)
T ss_pred -cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHH---HHHHhcC-CcccC------
Confidence 1233468899999999988889999999999999999999999996422 11111 1111110 00000
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+......+.+++.+|+..||++||++.++++
T Consensus 237 -~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 237 -NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -CcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 11122346889999999999999999999987
No 231
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1e-33 Score=319.63 Aligned_cols=268 Identities=21% Similarity=0.265 Sum_probs=198.0
Q ss_pred ccCeEccc--CceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 775 QANIIGCG--GFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 775 ~~~~lG~G--~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
+.++||+| +|++||++..+ +|+.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35789999 78899999765 78999999987543 334456788999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+........
T Consensus 82 ~~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 82 AYGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CCCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 9999999986532 33588999999999999999999986 999999999999999999999999987644321111
Q ss_pred e------eeecccccccccCccccCC--cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhc-----
Q 001561 930 H------VTTDLVGTLGYIPPEYSQT--LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSE----- 996 (1052)
Q Consensus 930 ~------~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~----- 996 (1052)
. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||....... ............
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~ 234 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKLNGTVPCLLDTT 234 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH--HHHHHhcCCcccccccc
Confidence 0 0112356778999998865 468899999999999999999999996422111 011000000000
Q ss_pred ---------cc-----cccc------------ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcC
Q 001561 997 ---------KR-----EVEI------------IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIG 1048 (1052)
Q Consensus 997 ---------~~-----~~~~------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~ 1048 (1052)
.. .... ................+.+++.+|++.||++|||++|+++ +++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 00 0000 0000000111233457889999999999999999999998 666654
Q ss_pred c
Q 001561 1049 I 1049 (1052)
Q Consensus 1049 ~ 1049 (1052)
.
T Consensus 315 ~ 315 (327)
T cd08227 315 R 315 (327)
T ss_pred h
Confidence 3
No 232
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.1e-34 Score=317.46 Aligned_cols=254 Identities=22% Similarity=0.378 Sum_probs=205.3
Q ss_pred cCCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
++|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 5799999999999999999986 478999999987655555567889999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+........
T Consensus 99 ~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 99 AGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred CCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 99999998853 3478899999999999999999986 999999999999999999999999999976543322
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......+++.|+|||...+..++.++|||||||++|++++|+.||....... . ........ ... .
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~--~----~~~~~~~~-~~~-------~ 235 (297)
T cd06656 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR--A----LYLIATNG-TPE-------L 235 (297)
T ss_pred -CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch--h----eeeeccCC-CCC-------C
Confidence 2233468899999999988889999999999999999999999996322110 0 00000000 000 0
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
..+......+.+++.+|++.+|++||++.++++ +++..
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (297)
T cd06656 236 QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLA 275 (297)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccc
Confidence 011223346789999999999999999999998 65543
No 233
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5e-34 Score=312.68 Aligned_cols=252 Identities=25% Similarity=0.351 Sum_probs=199.7
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
++|++.+.||+|+||.||+|... +++.||+|.++.........+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46778889999999999999865 68899999987665455566889999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++.. ...+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.+.......
T Consensus 89 ~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd06645 89 GGGSLQDIYHV----TGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATI- 160 (267)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-
Confidence 99999998864 34688999999999999999999986 99999999999999999999999999997654321
Q ss_pred eeeecccccccccCccccC---CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQ---TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.......|++.|+|||++. ...++.++||||+||++|||++|+.||..... ..... .............
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~--~~~~~----~~~~~~~~~~~~~-- 232 (267)
T cd06645 161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP--MRALF----LMTKSNFQPPKLK-- 232 (267)
T ss_pred cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc--hhhHH----hhhccCCCCCccc--
Confidence 1223457899999999864 45688899999999999999999999853221 11111 1110100000000
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
........+.+++.+|++.+|++||+++++++
T Consensus 233 ----~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 233 ----DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ----ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00112346889999999999999999999875
No 234
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.2e-33 Score=311.81 Aligned_cols=251 Identities=24% Similarity=0.369 Sum_probs=200.9
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
+.|++.+.||+|+||.||+|... ++..||+|.+........+.+.+|++++++++||||+++++++..+...++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56888999999999999999875 58899999998766666677899999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
+++++..++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+.......
T Consensus 92 ~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 164 (292)
T cd06644 92 PGGAVDAIMLEL---DRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL- 164 (292)
T ss_pred CCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccc-
Confidence 999998877642 34589999999999999999999986 99999999999999999999999999987543221
Q ss_pred eeeecccccccccCccccC-----CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQ-----TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
.......+++.|+|||++. ...++.++|||||||++|||++|+.||..... ... ......... ....
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~---~~~~~~~~~-~~~~- 236 (292)
T cd06644 165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP---MRV---LLKIAKSEP-PTLS- 236 (292)
T ss_pred cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH---HHH---HHHHhcCCC-ccCC-
Confidence 1123346888999999874 34567899999999999999999999863211 111 111111110 0000
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+.....++.+++.+|++.+|++||++.|+++
T Consensus 237 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 237 ------QPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ------CCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 11122346889999999999999999999987
No 235
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.7e-34 Score=323.51 Aligned_cols=237 Identities=25% Similarity=0.357 Sum_probs=186.6
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHH-HHHhcCCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVE-ALSRAQHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
++||+|+||.||+|+.. +++.||+|++..... .....+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999875 688999999875321 22334555544 57888999999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|..++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (321)
T cd05603 81 GELFFHLQR----ERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ET 152 (321)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Cc
Confidence 999888764 34578889999999999999999986 99999999999999999999999999987532221 22
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||... +.......+. .. . ..+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~---~~~~~~~~i~---~~-~-~~~--------- 215 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR---DVSQMYDNIL---HK-P-LQL--------- 215 (321)
T ss_pred cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC---CHHHHHHHHh---cC-C-CCC---------
Confidence 33457999999999999889999999999999999999999999642 1112111111 11 0 000
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHH
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRPFIE 1038 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RPs~~ 1038 (1052)
+.....++.+++.+|++.||++||++.
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 216 PGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 111234688999999999999999764
No 236
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=5.6e-37 Score=333.72 Aligned_cols=363 Identities=25% Similarity=0.323 Sum_probs=234.9
Q ss_pred cEEEEEecCCCCc-ccCCccccCCcCCCeEecCCCCCCCCCcccccCCCCccEEeccCCcccCcccccccccCCccEEEc
Q 001561 87 RVTMLILPRKGLK-GIIPRSLGHLNQLKLLDLSCNHLEGVVPVELSNLKQLEVLDLSHNMLSGPVSGMLAGLNLIQSLNV 165 (1052)
Q Consensus 87 ~v~~l~L~~~~l~-g~~~~~l~~l~~L~~L~Ls~n~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 165 (1052)
-|..+|+++|.++ +..|.....+++++.|.|...++. .+|..++.+.+|++|.+++|++..
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~----------------- 69 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS----------------- 69 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh-----------------
Confidence 4666666777666 446666666666666666666665 556666666666666666666653
Q ss_pred cCcccCCcccccccCCcccEEEecCCccC-CccchhhhhcccccceeeccCcccccccccCCCCCCCCEEEcccccCCCC
Q 001561 166 SSNSFNGSLFELGEFSNLAVFNISNNSFT-GKLNSRIWSASKEIQILDLSMNHFMGSLQGLDHSPSLKQLHVDNNLLGGD 244 (1052)
Q Consensus 166 s~N~l~~~~~~l~~l~~L~~L~Ls~n~l~-~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~l~~~~~L~~L~L~~N~l~~~ 244 (1052)
+-.++..++.|+.+++..|++. ..+|.++|. +..|+.||||+|+++..|.++...+++-.|+|++|+|..+
T Consensus 70 -------vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~-l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetI 141 (1255)
T KOG0444|consen 70 -------VHGELSDLPRLRSVIVRDNNLKNSGIPTDIFR-LKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETI 141 (1255)
T ss_pred -------hhhhhccchhhHHHhhhccccccCCCCchhcc-cccceeeecchhhhhhcchhhhhhcCcEEEEcccCccccC
Confidence 3333444444555555555444 345666663 6778888888888888888888888888888888888855
Q ss_pred CCccccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEccCCcCCCCCcccccCccccccccccCCccc-CCCCccccc
Q 001561 245 LPDSLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFGNQFSGKLPNVLGNLTQLEFFVAHSNSFS-GPLPLSLSL 323 (1052)
Q Consensus 245 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~~~~l~~ 323 (1052)
.-.-|-++..|-.||||+|++. .+|..+..|..|++|.|++|.+...--..+..+++|+.|.+++.+=+ ..+|.++..
T Consensus 142 Pn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~ 220 (1255)
T KOG0444|consen 142 PNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDD 220 (1255)
T ss_pred CchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhh
Confidence 4445667888888888888887 66777888888888888888776443344455667777777775433 456777777
Q ss_pred CCCCcEEEecCccccCcCCcccccCCccceeecccccccCCCCccccCCCccceeecccccccccCchhhccCCcCcEEe
Q 001561 324 CSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPLPNSLSDCHDLKILSLAKNELSGQVPESFGKLTSLLFLS 403 (1052)
Q Consensus 324 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 403 (1052)
+.+|..+|+|.|.+. ..|.++-++.+|+.|+||+|+|+ .+....+.-.+|++|+||+|+++ .+|+.+++++.|+.|+
T Consensus 221 l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy 297 (1255)
T KOG0444|consen 221 LHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLY 297 (1255)
T ss_pred hhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHH
Confidence 777777777777777 56667777777777777777777 44445555667777777777777 6777777777777777
Q ss_pred ccCCcCCCCcccchhhccCcccceEeccccccCccCCccccCCCcccEEEccCCccccCcchhhhcCCCCcEEeCcCcc
Q 001561 404 LSNNSFNHLSGTLSVLQQCKNLTTLILTKNFVGEEIPENVGGFESLMVLALGNCGLKGHIPVWLLRCKKLQVLDLSWNH 482 (1052)
Q Consensus 404 L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 482 (1052)
+.+|+++. .+..+.++++.+|+.+..++|.+ +..|+.+..+.+|+.|.|++|++- .+|+.+.-++.|++|||..|.
T Consensus 298 ~n~NkL~F-eGiPSGIGKL~~Levf~aanN~L-ElVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 298 ANNNKLTF-EGIPSGIGKLIQLEVFHAANNKL-ELVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred hccCcccc-cCCccchhhhhhhHHHHhhcccc-ccCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 77777642 11112233444444444444444 334444444444444444444444 444444444444444444443
No 237
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=7.6e-34 Score=313.34 Aligned_cols=257 Identities=23% Similarity=0.403 Sum_probs=204.5
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCc----EEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGT----KAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
.+|++.+.||+|+||+||+|.+. +|. .||+|...... .....++.+|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 56888999999999999999864 333 58999887554 3345678899999999999999999999987 78899
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
||||+++|+|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.++..
T Consensus 86 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 86 ITQLMPLGCLLDYVRNH---KDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred EEecCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 99999999999998753 34589999999999999999999986 9999999999999999999999999999876
Q ss_pred CCCCCeeee-cccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccc
Q 001561 925 RPYDTHVTT-DLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI 1002 (1052)
Q Consensus 925 ~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
......... ...++..|+|||......++.++||||||+++||+++ |+.||.... ..+..+.+. .... .
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~---~~~~~~~~~----~~~~--~ 230 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP---AVEIPDLLE----KGER--L 230 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC---HHHHHHHHh----CCCC--C
Confidence 543322221 1223568999999888889999999999999999998 999996432 122222111 1100 0
Q ss_pred ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCcc
Q 001561 1003 IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGID 1050 (1052)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1050 (1052)
.. +......+.+++.+|+..+|.+||++.++++.|+++..+
T Consensus 231 ~~-------~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 231 PQ-------PPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred CC-------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 00 111223678999999999999999999999999987543
No 238
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.3e-34 Score=322.96 Aligned_cols=260 Identities=27% Similarity=0.402 Sum_probs=205.0
Q ss_pred cCCcccCeEcccCceEEEEEEECC--------CcEEEEEEecCCc-hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCC
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTN--------GTKAAVKRLSGDC-GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGN 840 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 840 (1052)
.+|++.+.||+|+||.||+|.... +..||+|.+.... ....+++.+|+++++++ +||||+++++++.+++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 468899999999999999997421 2368999887543 33456789999999999 7999999999999999
Q ss_pred eEEEEEEeccCCChhhhhhcccC------------CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC
Q 001561 841 DRLLIYSYMENGSLDYWLHESVD------------KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD 908 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~ 908 (1052)
..++++||+++|+|.+++..... ....+++.++..++.|++.|++|||+. +|+||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc
Confidence 99999999999999999875321 234588999999999999999999986 999999999999999
Q ss_pred CCCCeEEeecccccccCCCCCee-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhH
Q 001561 909 EKFEAHLADFGLSRLLRPYDTHV-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDL 986 (1052)
Q Consensus 909 ~~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~ 986 (1052)
+++.+||+|||.++......... .....++..|+|||++.+..++.++||||||+++|||++ |..||... +..+.
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~---~~~~~ 245 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI---PVEEL 245 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC---CHHHH
Confidence 99999999999998764322111 122234568999999998899999999999999999998 88998632 21222
Q ss_pred HHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 987 VSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
...+. ....... +.....++.+++.+|++.+|++||++.|+++.|+++..
T Consensus 246 ~~~~~----~~~~~~~---------~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 246 FKLLK----EGHRMDK---------PANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred HHHHH----cCCCCCC---------CCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 21111 1111111 11223478899999999999999999999999998863
No 239
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3e-34 Score=339.29 Aligned_cols=266 Identities=20% Similarity=0.256 Sum_probs=194.8
Q ss_pred HHHhhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCC------CceeeeeceEee
Q 001561 766 LLKSTNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQH------KNLVSLQGYCRH 838 (1052)
Q Consensus 766 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~~ 838 (1052)
+....++|++.+.||+|+||+||+|... +++.||||+++... ...+++..|++++++++| .+++++++++..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3345678999999999999999999865 67889999986432 233456677777777754 458889998876
Q ss_pred C-CeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCC------
Q 001561 839 G-NDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKF------ 911 (1052)
Q Consensus 839 ~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~------ 911 (1052)
. ...++|||++ +++|.+++.. ...+++..+..|+.|++.||+|||+. .+|+||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccc
Confidence 5 4678999988 7788887764 34689999999999999999999972 3999999999999998765
Q ss_pred ----------CeEEeecccccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCC
Q 001561 912 ----------EAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGK 981 (1052)
Q Consensus 912 ----------~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~ 981 (1052)
.+||+|||.+.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~- 350 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN- 350 (467)
T ss_pred cccccCCCCceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-
Confidence 49999999886432 223346899999999999999999999999999999999999999974321
Q ss_pred CchhHHHHHHHhhhccc-----------cccc----------cccccc-------chhhHHHHHHHHHHHHHcccCCCCC
Q 001561 982 NCRDLVSWVFQMKSEKR-----------EVEI----------IDASIW-------HKDREKQLLEMLEIACKCIDQDPRR 1033 (1052)
Q Consensus 982 ~~~~~~~~~~~~~~~~~-----------~~~~----------~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~ 1033 (1052)
.+....+.......+ ..++ .++... ..........+.+|+.+|++.||++
T Consensus 351 --~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 351 --LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred --HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 111111111100000 0000 000000 0000011346789999999999999
Q ss_pred CCCHHHHHH--HHhh
Q 001561 1034 RPFIEEVVT--WLDG 1046 (1052)
Q Consensus 1034 RPs~~evl~--~L~~ 1046 (1052)
|||++|+++ ++..
T Consensus 429 R~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 429 RLNARQMTTHPYVLK 443 (467)
T ss_pred CCCHHHHhcCccccc
Confidence 999999998 6654
No 240
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.4e-33 Score=308.10 Aligned_cols=253 Identities=27% Similarity=0.410 Sum_probs=204.6
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
++|+..+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++++||||+++++++.+....+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57888999999999999999865 67889999988665556678899999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++... ...+++..+..++.|++.|++|||+. +++|+||||+||++++++.+||+|||.+.......
T Consensus 83 ~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 155 (262)
T cd06613 83 GGGSLQDIYQVT---RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI- 155 (262)
T ss_pred CCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhh-
Confidence 999999988752 24688999999999999999999986 99999999999999999999999999998654321
Q ss_pred eeeecccccccccCccccCCc---CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTL---TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.......++..|+|||..... .++.++||||||+++|||++|+.||...... ... ....... .....
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~--~~~----~~~~~~~----~~~~~ 225 (262)
T cd06613 156 AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM--RAL----FLISKSN----FPPPK 225 (262)
T ss_pred hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHH----HHHHhcc----CCCcc
Confidence 122345788899999988776 7889999999999999999999998632211 111 1111110 00000
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.......+.++.+++.+|+..+|.+||++.+++.
T Consensus 226 --~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 226 --LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred --ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1112334567899999999999999999999875
No 241
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.6e-33 Score=307.75 Aligned_cols=251 Identities=29% Similarity=0.429 Sum_probs=193.3
Q ss_pred CeEcccCceEEEEEEEC----CCcEEEEEEecCC-chhhHHHHHHHHHHHHhcCCCceeeeeceEe-eCCeEEEEEEecc
Q 001561 777 NIIGCGGFGLVYKATLT----NGTKAAVKRLSGD-CGQMEREFQAEVEALSRAQHKNLVSLQGYCR-HGNDRLLIYSYME 850 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 850 (1052)
+.||+|+||.||+|.+. +...||+|++... .....+.+.+|+.+++.++||||+++++++. .++..++|+||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999753 2357999988543 2344567889999999999999999999876 4556789999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+|+|.+++... ....++..+..++.|+++|++|||+. +++||||||+||++++++.+|++|||+++........
T Consensus 81 ~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 81 HGDLRNFIRSE---THNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 99999998753 23467788899999999999999986 9999999999999999999999999999765432111
Q ss_pred e---eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcC-CCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 931 V---TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTG-RRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 931 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
. .....+++.|+|||...+..++.++||||||+++|||++| .+||... +..+....+. .... .
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~---~~~~~~~~~~---~~~~-~------ 221 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV---DSFDITVYLL---QGRR-L------ 221 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC---CHHHHHHHHh---cCCC-C------
Confidence 1 1123467789999999888899999999999999999994 6666432 2222222211 1100 0
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
..+...+..+.+++.+|++.+|++||++.|+++.|+++..
T Consensus 222 ---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 222 ---LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ---CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0011123468899999999999999999999999998743
No 242
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=8.6e-34 Score=324.14 Aligned_cols=259 Identities=21% Similarity=0.275 Sum_probs=195.6
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC------
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG------ 839 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 839 (1052)
..++|++.+.||+|+||.||+|... .++.||+|++.... ......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 3468999999999999999999864 68899999987542 33345678899999999999999999988643
Q ss_pred CeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecc
Q 001561 840 NDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFG 919 (1052)
Q Consensus 840 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG 919 (1052)
...++||||+++ ++.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 356999999976 55555532 378889999999999999999986 99999999999999999999999999
Q ss_pred cccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhh-----
Q 001561 920 LSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMK----- 994 (1052)
Q Consensus 920 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~----- 994 (1052)
+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+.........
T Consensus 165 ~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~~~~~~~~~~~ 239 (355)
T cd07874 165 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD---YIDQWNKVIEQLGTPCP 239 (355)
T ss_pred ccccCCCc--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHHhCCCCH
Confidence 99865432 22334578999999999998899999999999999999999999996422 111111110000
Q ss_pred --------------hcccc-cccc-----ccccc---chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 995 --------------SEKRE-VEII-----DASIW---HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 995 --------------~~~~~-~~~~-----~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..... .... ..... .........++.+++.+|++.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred HHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 00000 0000 00000 0001112346789999999999999999999998
No 243
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.4e-33 Score=312.40 Aligned_cols=261 Identities=25% Similarity=0.329 Sum_probs=202.7
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788999999999999999865 78999999987543 33456789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+ +++|.+++... ...+++.+++.++.|+++|++|||+. +++|+||||+||+++.++.++++|||.+.......
T Consensus 81 ~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 81 M-PSDLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred c-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9 99999988753 35689999999999999999999986 99999999999999999999999999998765433
Q ss_pred CeeeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccc--------
Q 001561 929 THVTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKRE-------- 999 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------- 999 (1052)
........|+..|+|||++.+. .++.++||||+|+++|||++|++||.... ......++.........
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN---DIEQLAIVFRTLGTPNEETWPGLTS 230 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC---HHHHHHHHHHHcCCCChHHHhhccC
Confidence 2223345789999999987654 46889999999999999999988885322 12222222221111000
Q ss_pred ----ccccccc----ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1000 ----VEIIDAS----IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1000 ----~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..+.... ............+.+++.+|++.+|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 231 LPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred cchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000000 000111123468899999999999999999999986
No 244
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=6.4e-34 Score=319.03 Aligned_cols=257 Identities=23% Similarity=0.337 Sum_probs=202.4
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcC-CC-----ceeeeeceEeeCCeEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQ-HK-----NLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~~~l 844 (1052)
+|++.++||+|+||.|.+|... +++.||||+++... .-..+...|+.++..++ |. |+|+++++|...++.+|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 7999999999999999999754 79999999998653 33456688999999996 43 89999999999999999
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC--CCCeEEeeccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE--KFEAHLADFGLSR 922 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~--~~~~kl~DfG~a~ 922 (1052)
|+|.++ -+|.++++.. ....++...++.|+.||+.||.+||+. +|||+||||+|||+.+ ...+||+|||.|.
T Consensus 266 VfELL~-~NLYellK~n--~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNN--KFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred eehhhh-hhHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccccc
Confidence 999885 5899999875 455699999999999999999999987 9999999999999974 3479999999998
Q ss_pred ccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhc------
Q 001561 923 LLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSE------ 996 (1052)
Q Consensus 923 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~------ 996 (1052)
+.... ...++.+..|+|||++.+.+|+.+.||||||||++||++|.+-|.+ ++..|.+..+.+..+.
T Consensus 340 ~~~q~----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG---~ne~DQl~~I~e~lG~Pp~~mL 412 (586)
T KOG0667|consen 340 FESQR----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG---DNEYDQLARIIEVLGLPPPKML 412 (586)
T ss_pred ccCCc----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC---CCHHHHHHHHHHHhCCCCHHHH
Confidence 75432 2256788899999999999999999999999999999999888753 3333333332222110
Q ss_pred ---ccccccccc---------------------------------------cccchh-hHHHHHHHHHHHHHcccCCCCC
Q 001561 997 ---KREVEIIDA---------------------------------------SIWHKD-REKQLLEMLEIACKCIDQDPRR 1033 (1052)
Q Consensus 997 ---~~~~~~~~~---------------------------------------~~~~~~-~~~~~~~l~~li~~cl~~dP~~ 1033 (1052)
......++. ..+... .......+.+++.+|+..||.+
T Consensus 413 ~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~ 492 (586)
T KOG0667|consen 413 DTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAE 492 (586)
T ss_pred HhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchh
Confidence 000001111 000011 1133457899999999999999
Q ss_pred CCCHHHHHH
Q 001561 1034 RPFIEEVVT 1042 (1052)
Q Consensus 1034 RPs~~evl~ 1042 (1052)
|+|..|+++
T Consensus 493 R~tp~qal~ 501 (586)
T KOG0667|consen 493 RITPAQALN 501 (586)
T ss_pred cCCHHHHhc
Confidence 999999987
No 245
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-35 Score=327.44 Aligned_cols=254 Identities=25% Similarity=0.396 Sum_probs=210.8
Q ss_pred cccCeEcccCceEEEEEEEC-CCc----EEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 774 NQANIIGCGGFGLVYKATLT-NGT----KAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 774 ~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
+..++||+|+||+||+|.|- .|+ +||+|++.... .+...++.+|+-+|.+++|||+++++++|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 44679999999999999864 443 68999887554 455678999999999999999999999998776 789999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
||+.|+|.+|++.+ ...+..+..+.|..|||+|+.|||.+ +++||||.++|||+.+-..+||+|||+|+...++
T Consensus 778 ~mP~G~LlDyvr~h---r~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREH---RDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred hcccchHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 99999999999874 55688899999999999999999986 9999999999999999999999999999988776
Q ss_pred CCeeeecc-cccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 928 DTHVTTDL-VGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 928 ~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
..+..... .-.+.|||-|.+....++.++|||||||++||++| |..|+++....+..++++.
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~---------------- 915 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEK---------------- 915 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhc----------------
Confidence 55444332 22458999999999999999999999999999999 9999986554443333211
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCcc
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGID 1050 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1050 (1052)
...-..++.+...++.++.+||..|+..||+++++...+.++..+
T Consensus 916 geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 916 GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 111223344556789999999999999999999999999887654
No 246
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=9.4e-34 Score=312.80 Aligned_cols=255 Identities=24% Similarity=0.373 Sum_probs=204.0
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
++|++.+.||+|+||.||+|... ++..||+|.+........+.+.+|++++++++||||+++++++.++...++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 46888999999999999999875 68899999988666666677899999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++... +..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+.......
T Consensus 85 ~~~~L~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~- 157 (280)
T cd06611 85 DGGALDSIMLEL---ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL- 157 (280)
T ss_pred CCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccc-
Confidence 999999988752 34689999999999999999999986 99999999999999999999999999987654322
Q ss_pred eeeecccccccccCccccC-----CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQ-----TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
.......|++.|+|||.+. ...++.++||||||+++|||++|+.||.... ..... ........ ...
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~---~~~~~---~~~~~~~~-~~~-- 228 (280)
T cd06611 158 QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN---PMRVL---LKILKSEP-PTL-- 228 (280)
T ss_pred cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC---HHHHH---HHHhcCCC-CCc--
Confidence 1223356899999999864 3456789999999999999999999996421 11111 11111100 000
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhh
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDG 1046 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 1046 (1052)
..+.....++.+++.+|++.+|.+||++.++++ ++.+
T Consensus 229 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 229 -----DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred -----CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence 011122346889999999999999999999987 4443
No 247
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-35 Score=321.39 Aligned_cols=249 Identities=25% Similarity=0.410 Sum_probs=207.4
Q ss_pred CCcccCeEcccCceEEEEEEEC--CCc--EEEEEEecCCchh-hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT--NGT--KAAVKRLSGDCGQ-MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~--~g~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
+....+.||+|.||.|++|.|+ +|+ .||||.++.+... ...+|.+|+.+|-+++|||++++||+..+ ....+||
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence 4455788999999999999987 344 5899999876543 56789999999999999999999999987 6788999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
|.++.|+|.+.|++ .....+-......++.|||.|+.||.+. +.||||+.++|+++-....+||+|||+.+.++.
T Consensus 190 ELaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hhcccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 99999999999987 3566788899999999999999999985 999999999999999999999999999998876
Q ss_pred CCCee-eec-ccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccc
Q 001561 927 YDTHV-TTD-LVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEII 1003 (1052)
Q Consensus 927 ~~~~~-~~~-~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
.+... +.. .--.+.|+|||.+....++.++|||+|||++|||+| |+.||.++.+. +++ +.+
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~---qIL-------------~~i 328 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI---QIL-------------KNI 328 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH---HHH-------------Hhc
Confidence 54432 221 233458999999999999999999999999999999 88999755432 111 112
Q ss_pred cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1004 DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
|.......++.+++.+++++..||...|++||++..+.+
T Consensus 329 D~~erLpRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 329 DAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred cccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 222233445567789999999999999999999999985
No 248
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.6e-33 Score=312.04 Aligned_cols=257 Identities=25% Similarity=0.392 Sum_probs=202.2
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
+|++.+.||+|+||.||+|... ++..||+|.+.... ......+.+|++++++++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5888999999999999999876 78999999887542 333467889999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++.... ....+++..+..++.+++.|+.|||+. .+|+||||||+||+++.++.++|+|||.+..+...
T Consensus 82 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 156 (286)
T cd06622 82 DAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-- 156 (286)
T ss_pred CCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence 9999999887532 234689999999999999999999963 48999999999999999999999999999765322
Q ss_pred eeeecccccccccCccccCCc------CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTL------TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEII 1003 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
......+++.|+|||.+.+. .++.++|||||||++|||++|+.||..... ............ ....
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~~~~~~~-~~~~--- 228 (286)
T cd06622 157 -LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY---ANIFAQLSAIVD-GDPP--- 228 (286)
T ss_pred -ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch---hhHHHHHHHHhh-cCCC---
Confidence 12234688899999987544 347899999999999999999999964221 111111111111 1100
Q ss_pred cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 1004 DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
..+.....++.+++.+|++.+|++||++.++++ ++...
T Consensus 229 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~ 268 (286)
T cd06622 229 ------TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY 268 (286)
T ss_pred ------CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhc
Confidence 111123457889999999999999999999988 54443
No 249
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.3e-33 Score=307.07 Aligned_cols=250 Identities=24% Similarity=0.408 Sum_probs=199.9
Q ss_pred CCcccCeEcccCceEEEEEEECCCcEEEEEEecCCc------hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDC------GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
+|+..+.||+|+||+||+|...+++.+|+|.+.... ......+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 478889999999999999988889999999886432 12234688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
+||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+|+||+|+||++++++.++++|||.+....
T Consensus 81 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 81 MEFVPGGSISSILNRF----GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 9999999999998642 3578999999999999999999986 99999999999999999999999999997653
Q ss_pred CCC-----CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 926 PYD-----THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 926 ~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
... ........|+..|+|||+..+..++.++||||||+++|||++|+.||..... .... .........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--~~~~----~~~~~~~~~- 226 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR--LAAM----FYIGAHRGL- 226 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh--HHHH----HHhhhccCC-
Confidence 211 1112335689999999999988899999999999999999999999963211 1111 111111000
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+.. +.....++.+++.+|++.+|++||++.|+++
T Consensus 227 ---~~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 227 ---MPRL----PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ---CCCC----CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0111 1123346889999999999999999999875
No 250
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.4e-33 Score=313.38 Aligned_cols=263 Identities=28% Similarity=0.383 Sum_probs=205.1
Q ss_pred ccHHHHHHhhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhc-CCCceeeeeceEee
Q 001561 761 LTVSDLLKSTNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRA-QHKNLVSLQGYCRH 838 (1052)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 838 (1052)
+++.++..+.++|++.+.||+|+||.||+|... +++.+|+|++.... ....++.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 344555667789999999999999999999864 68899999986432 2345678899999999 89999999999875
Q ss_pred C-----CeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCe
Q 001561 839 G-----NDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEA 913 (1052)
Q Consensus 839 ~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~ 913 (1052)
. +..++||||+++|+|.++++........+++..++.++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCE
Confidence 4 357999999999999998876544556789999999999999999999986 99999999999999999999
Q ss_pred EEeecccccccCCCCCeeeecccccccccCccccCCc-----CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHH
Q 001561 914 HLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTL-----TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVS 988 (1052)
Q Consensus 914 kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~ 988 (1052)
||+|||.+........ ......|+..|+|||.+... .++.++|||||||++|||++|+.||..... ....
T Consensus 168 kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~--~~~~-- 242 (291)
T cd06639 168 KLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP--VKTL-- 242 (291)
T ss_pred EEeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH--HHHH--
Confidence 9999999987543221 12234688999999986543 368899999999999999999999864221 1111
Q ss_pred HHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 989 WVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..... .......+ .......+.+++.+|++.+|++||++.|+++
T Consensus 243 --~~~~~-~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 243 --FKIPR-NPPPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred --HHHhc-CCCCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11111 11111111 1123346899999999999999999999986
No 251
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.3e-33 Score=323.81 Aligned_cols=258 Identities=20% Similarity=0.260 Sum_probs=195.4
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC------C
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG------N 840 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 840 (1052)
.++|++.+.||+|+||.||+|... .++.||||++.... ......+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 468999999999999999999865 68899999987542 33345678899999999999999999987543 3
Q ss_pred eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccc
Q 001561 841 DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGL 920 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~ 920 (1052)
..++||||+++ ++.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred eEEEEEeCCCC-CHHHHHHh------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 57999999975 56665542 377889999999999999999986 999999999999999999999999999
Q ss_pred ccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhh-----
Q 001561 921 SRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKS----- 995 (1052)
Q Consensus 921 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~----- 995 (1052)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+.....
T Consensus 173 a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~~~~~~~~~~~~~~~ 247 (364)
T cd07875 173 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD---HIDQWNKVIEQLGTPCPE 247 (364)
T ss_pred ccccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHhcCCCCHH
Confidence 9865432 22234578999999999999999999999999999999999999996422 1111111111000
Q ss_pred --------------ccccc-cc----cccccc----chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 996 --------------EKREV-EI----IDASIW----HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 996 --------------~~~~~-~~----~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..... .. ..+... .........++.+++.+|++.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000 00 000000 0001112346889999999999999999999987
No 252
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.8e-33 Score=308.26 Aligned_cols=253 Identities=23% Similarity=0.355 Sum_probs=190.0
Q ss_pred eEcccCceEEEEEEECCC---cEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCC
Q 001561 778 IIGCGGFGLVYKATLTNG---TKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGS 853 (1052)
Q Consensus 778 ~lG~G~~g~Vy~~~~~~g---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 853 (1052)
.||+|+||+||+|...++ ..+++|.+.... ....+.+.+|+..++.++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999975433 346677766443 3445688999999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC-Ceee
Q 001561 854 LDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD-THVT 932 (1052)
Q Consensus 854 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~~~ 932 (1052)
|.++++.........++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||.+....... ....
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 9999986543344567778889999999999999986 99999999999999999999999999986432111 1112
Q ss_pred ecccccccccCccccCC-------cCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 933 TDLVGTLGYIPPEYSQT-------LTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 933 ~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
....++..|+|||+... ..++.++||||||+++|||++ |..||.... ..+....+. . .......+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~---~~~~~~~~~---~-~~~~~~~~ 231 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS---DREVLNHVI---K-DQQVKLFK 231 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHH---h-hcccccCC
Confidence 23467889999998743 345789999999999999997 577875322 122222111 1 11112222
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
+..... ....+.+++..|+ .+|++||+++|+++.|.
T Consensus 232 ~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 PQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 222222 2236778899999 67999999999998874
No 253
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.1e-33 Score=308.93 Aligned_cols=247 Identities=27% Similarity=0.392 Sum_probs=202.0
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
+|+..+.||.|++|.||+|... +++.||+|.+.... ......+.+|+++++.++|+||+++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 6788899999999999999865 68899999987543 334466889999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||.++......
T Consensus 82 ~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 152 (274)
T cd06609 82 GGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM- 152 (274)
T ss_pred CCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc-
Confidence 999999998642 689999999999999999999986 99999999999999999999999999998775432
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
.......+++.|+|||+..+..++.++||||||+++|+|++|+.||.... ..... .... .........
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~---~~~~~---~~~~-~~~~~~~~~----- 220 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLH---PMRVL---FLIP-KNNPPSLEG----- 220 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCc---hHHHH---HHhh-hcCCCCCcc-----
Confidence 22233578889999999988889999999999999999999999996322 11111 1111 111111110
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
. .....+.+++.+|+..+|++||+++++++
T Consensus 221 ~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 221 N---KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred c---ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0 03346889999999999999999999987
No 254
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.5e-33 Score=312.32 Aligned_cols=261 Identities=24% Similarity=0.332 Sum_probs=199.8
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
++|+..+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++|||++++++++..+...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36888999999999999999876 68999999886432 2334567899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|++++.+..++.. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 81 YCDHTVLNELEKN----PRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred ccCccHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 9999988877653 33589999999999999999999986 9999999999999999999999999999876543
Q ss_pred CCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhc----------
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSE---------- 996 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~---------- 996 (1052)
.. ......++..|+|||++.+ ..++.++||||||+++|||++|+.||...... +....+......
T Consensus 154 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 154 GD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV---DQLYLIRKTLGDLIPRHQQIFS 229 (286)
T ss_pred cc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCChHHhhhcc
Confidence 21 2233467889999998765 56788999999999999999999999643221 111111110000
Q ss_pred -cc---ccccccccccc---hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 997 -KR---EVEIIDASIWH---KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 997 -~~---~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.. .....++.... .........+.+++.+|++++|++||++.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 230 TNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00 00000000000 001122457889999999999999999999875
No 255
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-34 Score=320.68 Aligned_cols=245 Identities=24% Similarity=0.378 Sum_probs=195.0
Q ss_pred cccCeEcccCceEEEEEEEC-CCcEEEEEEec----CCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCe--EEEEE
Q 001561 774 NQANIIGCGGFGLVYKATLT-NGTKAAVKRLS----GDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGND--RLLIY 846 (1052)
Q Consensus 774 ~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~----~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~ 846 (1052)
+...+||+|+|-+||||... +|..||--.++ ...+...+.|..|+++++.++|||||++++++.+... ..+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 44678999999999999765 67777743222 1223444779999999999999999999999987655 67899
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC-CCCeEEeecccccccC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE-KFEAHLADFGLSRLLR 925 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~-~~~~kl~DfG~a~~~~ 925 (1052)
|.|..|+|..|..++ +.+.......|+.||++||.|||++ +|+|+|||||-+||+|+. .|.|||+|+|+|+...
T Consensus 123 EL~TSGtLr~Y~kk~----~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r 197 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKH----RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR 197 (632)
T ss_pred ecccCCcHHHHHHHh----ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence 999999999999864 3467889999999999999999998 899999999999999985 5999999999999876
Q ss_pred CCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
.... ..++|||.|||||+.. ..|+..+||||||++++||+|+..||..|.... .+...+....+......+-
T Consensus 198 ~s~a---ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A--QIYKKV~SGiKP~sl~kV~-- 269 (632)
T KOG0584|consen 198 KSHA---KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA--QIYKKVTSGIKPAALSKVK-- 269 (632)
T ss_pred cccc---ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH--HHHHHHHcCCCHHHhhccC--
Confidence 4332 2369999999999887 689999999999999999999999997554221 1111122111111111111
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..++.++|.+|+.. .++||++.|+++
T Consensus 270 ----------dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 270 ----------DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred ----------CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 23789999999999 999999999987
No 256
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.6e-33 Score=306.64 Aligned_cols=250 Identities=25% Similarity=0.364 Sum_probs=203.7
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|+..++||+|+||.||.++.. ++..+|+|.+.... ....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4888999999999999999754 68899999876442 34456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++++|.+++.... ...+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 81 ANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred cCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 99999999987542 45689999999999999999999986 99999999999999999999999999998764433
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
. ......|++.|+|||...+..++.++||||||+++|||++|+.||... ...+.... .......
T Consensus 156 ~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~---~~~~~~~~---~~~~~~~--------- 219 (256)
T cd08221 156 S-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT---NPLNLVVK---IVQGNYT--------- 219 (256)
T ss_pred c-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC---CHHHHHHH---HHcCCCC---------
Confidence 2 233457899999999998888899999999999999999999999632 11122211 1111100
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTW 1043 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1043 (1052)
........++.+++.+|++.+|.+||++.|+++.
T Consensus 220 -~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 220 -PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred -CCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 0012233468899999999999999999999874
No 257
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-33 Score=325.90 Aligned_cols=259 Identities=20% Similarity=0.240 Sum_probs=195.3
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
...|.+.+.||+|+||.||+|... +++.||||.... ..+.+|++++++++|+|||++++++..++..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 347999999999999999999876 578899996432 2356899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+. ++|.+++... ...+++..++.|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 242 ~~-~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 242 YR-SDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred cC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 95 6888877642 34689999999999999999999986 99999999999999999999999999998754322
Q ss_pred C-eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccC-CCC----chhHHHHHHHhhhcc-cccc
Q 001561 929 T-HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCK-GKN----CRDLVSWVFQMKSEK-REVE 1001 (1052)
Q Consensus 929 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~-~~~----~~~~~~~~~~~~~~~-~~~~ 1001 (1052)
. .......||+.|+|||++.+..++.++|||||||++|||++|..|+.... ... ...+.+.+....... ....
T Consensus 315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 1 12234579999999999999999999999999999999999887653221 111 111111111100000 0000
Q ss_pred cc--------------------cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1002 II--------------------DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1002 ~~--------------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.. ....|..+ ......+.+++.+|++.||++|||+.|+++
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRY-YKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhh-ccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 00 00000000 012236789999999999999999999987
No 258
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.2e-33 Score=309.63 Aligned_cols=264 Identities=28% Similarity=0.394 Sum_probs=206.8
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC--CeEEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG--NDRLLIYS 847 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 847 (1052)
+|+..+.||.|++|.||+|... +++.||+|.+.... .....++.+|++++++++||||+++++++.+. ...++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 5788899999999999999875 68899999987543 34456789999999999999999999988653 46899999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+++++|.+++.........+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999998775444556689999999999999999999986 9999999999999999999999999998765322
Q ss_pred CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCC--CCchhHHHHHHHhhhcccccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKG--KNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
. .....++..|+|||...+..++.++||||+|+++|+|++|+.||..... ....+...+..... .....+.
T Consensus 159 ~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 231 (287)
T cd06621 159 L---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP----NPELKDE 231 (287)
T ss_pred c---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC----chhhccC
Confidence 1 1234678899999999888999999999999999999999999975422 11122222222111 0011000
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcC
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIG 1048 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~ 1048 (1052)
. .........+.+++.+|++.+|.+|||+.|+++ ++.+..
T Consensus 232 -~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 232 -P--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred -C--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence 0 001123457899999999999999999999998 655443
No 259
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.1e-33 Score=308.35 Aligned_cols=238 Identities=25% Similarity=0.432 Sum_probs=189.2
Q ss_pred CeEcccCceEEEEEEECCCc-----------EEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 777 NIIGCGGFGLVYKATLTNGT-----------KAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~~g~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
+.||+|+||.||+|.+.+.. .|++|.+...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46899999999999876332 5778877644333 6778999999999999999999999988 778999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCC-------CeEEeec
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKF-------EAHLADF 918 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~-------~~kl~Df 918 (1052)
|||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+|++||
T Consensus 79 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 79 EEYVKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred EEcCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCC
Confidence 9999999999998753 22688999999999999999999986 999999999999999887 7999999
Q ss_pred ccccccCCCCCeeeecccccccccCccccCCc--CCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhh
Q 001561 919 GLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTL--TATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKS 995 (1052)
Q Consensus 919 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~ 995 (1052)
|++..... .....++..|+|||++... .++.++||||||+++|||++ |..||...... ....+.. .
T Consensus 153 g~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~---~~~~~~~---~ 221 (259)
T cd05037 153 GIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS---EKERFYQ---D 221 (259)
T ss_pred Cccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch---hHHHHHh---c
Confidence 99987543 1223567789999998776 78999999999999999999 57777543211 1111111 0
Q ss_pred cccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 996 EKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
. .. ...+ ....+.+++.+|+..+|.+||++.|+++.|+
T Consensus 222 ~-~~--~~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 222 Q-HR--LPMP---------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred C-CC--CCCC---------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 00 0000 0147889999999999999999999999874
No 260
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.3e-33 Score=308.74 Aligned_cols=254 Identities=23% Similarity=0.362 Sum_probs=203.7
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEee--CCeEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRH--GNDRLLIY 846 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 846 (1052)
+|++.+.||.|+||.||+|... ++..||+|++.... ....+++..|++++++++||||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4788899999999999999754 68899999886432 3344568899999999999999999998754 45678999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcC--CCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVC--EPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
||+++++|.+++.........+++..++.++.|++.|++|||..+ ..+++|+||||+||++++++.+|++|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999999876555677999999999999999999999322 249999999999999999999999999999876
Q ss_pred CCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 925 RPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 925 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
..... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... .....+.+ .....
T Consensus 161 ~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~----~~~~~----- 227 (265)
T cd08217 161 GHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN---QLQLASKI----KEGKF----- 227 (265)
T ss_pred cCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC---HHHHHHHH----hcCCC-----
Confidence 54322 1234578999999999988889999999999999999999999996422 11222111 11110
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...+.....++.+++.+|++.+|++||++.+|++
T Consensus 228 ----~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 228 ----RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred ----CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 1112233457899999999999999999999986
No 261
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=9.2e-34 Score=314.28 Aligned_cols=262 Identities=26% Similarity=0.350 Sum_probs=202.5
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
++|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++|+||+++++++.+++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999876 68899999886432 2334678999999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|++++.+..+... ...+++.++..++.|++.|++|||+. +++|||++|+||++++++.+||+|||.+......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 81 YVERTLLELLEAS----PGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred cCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 9998777665542 34589999999999999999999986 9999999999999999999999999999876654
Q ss_pred CCeeeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhc----------
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSE---------- 996 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~---------- 996 (1052)
.........++..|+|||++.+. .++.++||||||+++|+|++|++||.... ..+...........
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDS---DIDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHHhCCCCHHHhhhcc
Confidence 43233446788999999998877 88999999999999999999999996422 11111111111000
Q ss_pred --cc--cccccccccc----chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 997 --KR--EVEIIDASIW----HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 997 --~~--~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.. .....+.... ..++.....++.+++.+|++.+|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00 0000000000 0011122567899999999999999999999875
No 262
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.3e-33 Score=321.28 Aligned_cols=263 Identities=24% Similarity=0.316 Sum_probs=197.5
Q ss_pred HhhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch--hhHHHHHHHHHHHHhcCCCceeeeeceEeeC-----
Q 001561 768 KSTNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG--QMEREFQAEVEALSRAQHKNLVSLQGYCRHG----- 839 (1052)
Q Consensus 768 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 839 (1052)
...++|++.+.||+|+||+||+|... ++..||||++..... ...+.+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 34568999999999999999999864 688999999875432 2345677899999999999999999987543
Q ss_pred -CeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeec
Q 001561 840 -NDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADF 918 (1052)
Q Consensus 840 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~Df 918 (1052)
...++++|++ +++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3568999988 778887764 23589999999999999999999986 9999999999999999999999999
Q ss_pred ccccccCCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcc
Q 001561 919 GLSRLLRPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEK 997 (1052)
Q Consensus 919 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
|+++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.... ..+....+.......
T Consensus 163 g~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~~~~~~~~~ 235 (343)
T cd07878 163 GLARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGND---YIDQLKRIMEVVGTP 235 (343)
T ss_pred ccceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCC---HHHHHHHHHHHhCCC
Confidence 999865432 234578999999998766 568899999999999999999999996421 111111111111000
Q ss_pred ccccccc--------------ccccc----hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 998 REVEIID--------------ASIWH----KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 998 ~~~~~~~--------------~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
. .+... +.... .........+.+++.+|++.||++|||+.|+++ ++...
T Consensus 236 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~ 304 (343)
T cd07878 236 S-PEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY 304 (343)
T ss_pred C-HHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence 0 00000 00000 000011235789999999999999999999996 55543
No 263
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.4e-33 Score=309.22 Aligned_cols=248 Identities=26% Similarity=0.447 Sum_probs=198.7
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch---------hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---------QMEREFQAEVEALSRAQHKNLVSLQGYCRHGND 841 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 841 (1052)
+|.+.+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3677889999999999999864 688999998864422 122567899999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccc
Q 001561 842 RLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLS 921 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a 921 (1052)
.++||||+++++|.+++.. ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+
T Consensus 81 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred cEEEEEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCC
Confidence 9999999999999999864 34578899999999999999999986 9999999999999999999999999999
Q ss_pred cccCCCCC-----eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhc
Q 001561 922 RLLRPYDT-----HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSE 996 (1052)
Q Consensus 922 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 996 (1052)
+....... .......|++.|+|||...+..++.++||||+|+++|+|++|+.||..... .. .+......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~---~~~~~~~~ 227 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ---LQ---AIFKIGEN 227 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH---HH---HHHHHhcc
Confidence 87652211 111234688899999999888899999999999999999999999964211 11 11111110
Q ss_pred ccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 997 KREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..+. .+......+.+++.+|++.||.+||++.|+++
T Consensus 228 ------~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 228 ------ASPE----IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ------CCCc----CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0011 11123347889999999999999999999986
No 264
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.5e-33 Score=306.29 Aligned_cols=253 Identities=24% Similarity=0.367 Sum_probs=189.6
Q ss_pred eEcccCceEEEEEEECC---CcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCC
Q 001561 778 IIGCGGFGLVYKATLTN---GTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGS 853 (1052)
Q Consensus 778 ~lG~G~~g~Vy~~~~~~---g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 853 (1052)
.||+|+||+||+|...+ ...+|+|.+.... ......+.+|++.++.++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 3468888776443 3345678899999999999999999999999999999999999999
Q ss_pred hhhhhhcccCC-ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee-
Q 001561 854 LDYWLHESVDK-DSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV- 931 (1052)
Q Consensus 854 L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~- 931 (1052)
|.+++...... ....++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 99999765322 23456788899999999999999986 99999999999999999999999999987543322111
Q ss_pred eecccccccccCccccC-------CcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccc
Q 001561 932 TTDLVGTLGYIPPEYSQ-------TLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEII 1003 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
.....+++.|+|||+.. ...++.++||||||+++|||++ |..||.... ..+........ ......
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~---~~~~~~~~~~~----~~~~~~ 231 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLS---DEQVLKQVVRE----QDIKLP 231 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCC---HHHHHHHHhhc----cCccCC
Confidence 12234567899999764 3456789999999999999999 788886321 11222111111 111111
Q ss_pred cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 1004 DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
.+.. .......+.+++..|+ .||++||+++||++.|.
T Consensus 232 ~~~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 232 KPQL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCcc----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1211 1122345677888888 59999999999999873
No 265
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1e-33 Score=313.16 Aligned_cols=261 Identities=23% Similarity=0.300 Sum_probs=197.0
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|+..+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999875 78999999986432 22235578899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++ +|.+++... ...+++..++.++.|+++|++|||+. +|+||||||+||+++.++.+||+|||.++......
T Consensus 81 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 81 CDQ-DLKKYFDSC---NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred CCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 974 777776542 34589999999999999999999986 99999999999999999999999999998654322
Q ss_pred CeeeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc---------
Q 001561 929 THVTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR--------- 998 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~--------- 998 (1052)
.......+++.|+|||++.+. .++.++|||||||++|||++|+.|+.... +..+....+........
T Consensus 154 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07839 154 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN--DVDDQLKRIFRLLGTPTEESWPGVSK 230 (284)
T ss_pred -CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCC--CHHHHHHHHHHHhCCCChHHhHHhhh
Confidence 122334678899999987654 47899999999999999999999864321 22222222211111000
Q ss_pred ------ccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 999 ------EVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 999 ------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.........+.........++.+++.+|++.||.+|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00000000001111223457889999999999999999999975
No 266
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-35 Score=317.35 Aligned_cols=243 Identities=28% Similarity=0.419 Sum_probs=198.9
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCC---chhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGD---CGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
|.-.+.||.|+||.||-|+.. +.+.||||++.-. ..+...++..|++.+++++|||+|.+-|+|..+...|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 444567999999999999854 7889999998743 234456789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
|- |+-.+.+.-. ..++.+.++..|..+++.||+|||++ +.||||||+.|||+++.|.||++|||.|..+.+.
T Consensus 108 Cl-GSAsDlleVh---kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA- 179 (948)
T KOG0577|consen 108 CL-GSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA- 179 (948)
T ss_pred Hh-ccHHHHHHHH---hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence 95 5677777653 45688889999999999999999998 9999999999999999999999999999877553
Q ss_pred CeeeecccccccccCcccc---CCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYS---QTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
..++|||.|||||++ ..+.|+-++||||+|++-.|+...++|+-.+. . ....+.+..... ..
T Consensus 180 ----nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN---A---MSALYHIAQNes-Pt---- 244 (948)
T KOG0577|consen 180 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN---A---MSALYHIAQNES-PT---- 244 (948)
T ss_pred ----hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch---H---HHHHHHHHhcCC-CC----
Confidence 347999999999975 45789999999999999999999999975322 2 222222222211 11
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+ ...+++..+..++..|+++-|.+|||..+++.
T Consensus 245 -L---qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 245 -L---QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred -C---CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 1 13456678999999999999999999999876
No 267
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.7e-33 Score=306.54 Aligned_cols=249 Identities=22% Similarity=0.370 Sum_probs=199.7
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEee-CCeEEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRH-GNDRLLIYS 847 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 847 (1052)
+|++.+.||+|++|.||+|... +++.||+|++.... ....+.+..|++++++++|+|++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788999999999999999865 57899999986432 2344568899999999999999999998764 446789999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+++++|.+++... ....+++.++..++.+++.|++|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQ--KGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ccCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 99999999998753 244589999999999999999999986 9999999999999999999999999999876432
Q ss_pred CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASI 1007 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
. .......+++.|+|||+..+..++.++||||+|+++|+|++|+.||.... .. ......... ...
T Consensus 156 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~---~~---~~~~~~~~~-~~~------- 220 (257)
T cd08223 156 C-DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD---MN---SLVYRIIEG-KLP------- 220 (257)
T ss_pred C-CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC---HH---HHHHHHHhc-CCC-------
Confidence 2 22234578999999999999899999999999999999999999986321 11 111111111 100
Q ss_pred cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1008 WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..+......+.+++.+|++.+|++||++.++++
T Consensus 221 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 221 --PMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred --CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 011223347889999999999999999999975
No 268
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.3e-33 Score=312.16 Aligned_cols=260 Identities=25% Similarity=0.417 Sum_probs=202.1
Q ss_pred ccHHHHHHhhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhc-CCCceeeeeceEee
Q 001561 761 LTVSDLLKSTNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRA-QHKNLVSLQGYCRH 838 (1052)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 838 (1052)
.++.++....+.|++.+.||+|+||.||+|... +++.||+|++.... ....++..|+.+++++ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 355566667788999999999999999999864 68899999886543 2345678899999998 69999999999853
Q ss_pred ------CCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCC
Q 001561 839 ------GNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFE 912 (1052)
Q Consensus 839 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~ 912 (1052)
....+++|||+++|+|.+++.... ...+++..+..++.|+++|++|||+. +|+||||||+||++++++.
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCC
Confidence 457899999999999999887532 34578888999999999999999986 9999999999999999999
Q ss_pred eEEeecccccccCCCCCeeeecccccccccCccccC-----CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHH
Q 001561 913 AHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQ-----TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLV 987 (1052)
Q Consensus 913 ~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~ 987 (1052)
++|+|||++........ ......|++.|+|||.+. ...++.++|||||||++|||++|+.||....... .
T Consensus 160 ~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~--~-- 234 (282)
T cd06636 160 VKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR--A-- 234 (282)
T ss_pred EEEeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh--h--
Confidence 99999999876542211 122357899999999865 3467889999999999999999999996322110 0
Q ss_pred HHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 988 SWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...... ..... . .....+..+.+++.+|++.||.+||++.|+++
T Consensus 235 --~~~~~~-~~~~~-----~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 235 --LFLIPR-NPPPK-----L---KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred --hhhHhh-CCCCC-----C---cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 011110 00000 0 01123347899999999999999999999975
No 269
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=9.7e-34 Score=308.60 Aligned_cols=240 Identities=23% Similarity=0.451 Sum_probs=189.1
Q ss_pred CeEcccCceEEEEEEECC--------CcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 777 NIIGCGGFGLVYKATLTN--------GTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+.||+|+||.||+|.... ..+||+|.+........+++.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 369999999999997642 234888887665555566788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCC--------eEEeeccc
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFE--------AHLADFGL 920 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~--------~kl~DfG~ 920 (1052)
+++|+|.++++.. ...+++..++.++.|++.|++|||+. +|+||||||+||+++.++. ++++|||.
T Consensus 81 ~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 81 VKFGSLDTYLKKN---KNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred CCCCcHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccccc
Confidence 9999999998753 33688999999999999999999986 9999999999999987765 59999999
Q ss_pred ccccCCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCC-CCCcccCCCCchhHHHHHHHhhhccc
Q 001561 921 SRLLRPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGR-RPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 921 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~-~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
+...... ....+++.|+|||++.+ ..++.++||||||+++|||++|. .||.... ...... .....
T Consensus 155 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~---~~~~~~----~~~~~- 221 (258)
T cd05078 155 SITVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALD---SQKKLQ----FYEDR- 221 (258)
T ss_pred ccccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhcc---HHHHHH----HHHcc-
Confidence 8754321 22467889999998876 45789999999999999999985 5654211 111110 01110
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 999 EVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
..+ +.....++.+++.+|++.+|++||+++++++.|+
T Consensus 222 -~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 -HQL---------PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -ccC---------CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 001 0111236889999999999999999999999874
No 270
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=291.16 Aligned_cols=251 Identities=23% Similarity=0.268 Sum_probs=196.3
Q ss_pred cCCcc-cCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhc-CCCceeeeeceEee----CCeEE
Q 001561 771 NNFNQ-ANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRA-QHKNLVSLQGYCRH----GNDRL 843 (1052)
Q Consensus 771 ~~~~~-~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~~~ 843 (1052)
++|++ .++||-|-.|.|-.+..+ +++++|+|++... + ..++|++.--+. .|||||+++++|+. .....
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-~----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL 135 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-P----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL 135 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-H----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence 34443 357999999999999755 7999999988633 2 246777775555 69999999998853 34567
Q ss_pred EEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC---CCCCeEEeeccc
Q 001561 844 LIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD---EKFEAHLADFGL 920 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~---~~~~~kl~DfG~ 920 (1052)
+|||+|+||.|...+++. ....+++.++..|+.||+.|++|||+. +|+||||||+|+|.+ .+..+|++|||+
T Consensus 136 iVmE~meGGeLfsriq~~--g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDR--GDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eeeecccchHHHHHHHHc--ccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccccc
Confidence 999999999999999875 466799999999999999999999997 999999999999997 456799999999
Q ss_pred ccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 921 SRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 921 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
|+.-.. .......+-||.|.|||++...+|+..+|+||+||++|-|++|.+||....+... --.+....... ..
T Consensus 211 AK~t~~--~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai---spgMk~rI~~g-qy 284 (400)
T KOG0604|consen 211 AKETQE--PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---SPGMKRRIRTG-QY 284 (400)
T ss_pred ccccCC--CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC---ChhHHhHhhcc-Cc
Confidence 987543 2233445789999999999999999999999999999999999999976443211 10111111100 01
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+ +..+.....++...++|+.++..+|.+|.|+.|++.
T Consensus 285 ~-----FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 285 E-----FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred c-----CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 1 112233456778899999999999999999999986
No 271
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.3e-33 Score=307.13 Aligned_cols=249 Identities=27% Similarity=0.403 Sum_probs=194.4
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-----hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC--CeE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-----GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG--NDR 842 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 842 (1052)
.+|+..+.||+|+||.||+|... ++..||+|++.... .+....+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36888999999999999999864 68899999886432 22335688899999999999999999988753 567
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
++++||+++++|.+++.. ...+++..++.++.|++.|++|||+. +|+||||||+||+++.++.++|+|||+++
T Consensus 82 ~l~~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 899999999999998864 33578899999999999999999986 99999999999999999999999999997
Q ss_pred ccCCCCC--eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 923 LLRPYDT--HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 923 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
....... .......++..|+|||.+.+..++.++||||+|+++|||++|+.||.... ....+........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~------~~~~~~~~~~~~~-- 226 (266)
T cd06651 155 RLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE------AMAAIFKIATQPT-- 226 (266)
T ss_pred ccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc------hHHHHHHHhcCCC--
Confidence 6543211 11123468889999999988889999999999999999999999996321 1111111111110
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+ ..+......+.+++ +|+..+|++||+++|+++
T Consensus 227 ---~~----~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 ---NP----QLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ---CC----CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 11 11122233566677 688899999999999975
No 272
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.7e-33 Score=305.91 Aligned_cols=252 Identities=26% Similarity=0.435 Sum_probs=200.8
Q ss_pred CCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCc------hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDC------GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
+|+..+.||+|++|.||+|.. .+++.||+|++.... ....+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477789999999999999985 478999999986433 1234678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCC-CeEEeecccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKF-EAHLADFGLSRL 923 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~-~~kl~DfG~a~~ 923 (1052)
||||+++++|.+++.. ..++++..+..++.|++.|++|||+. +++||||||+||+++.++ .++|+|||.+..
T Consensus 81 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 81 FVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEeccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 9999999999999864 34688999999999999999999986 999999999999998776 599999999987
Q ss_pred cCCCCCe---eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 924 LRPYDTH---VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 924 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
....... ......|+..|+|||...+..++.++||||+|+++|+|++|+.||........ .............
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~- 229 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH---LALIFKIASATTA- 229 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch---HHHHHHHhccCCC-
Confidence 6543211 12234688999999998888899999999999999999999999963222111 1111111111100
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...+.....++.+++.+|++.+|.+||++.|+++
T Consensus 230 --------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 230 --------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred --------CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 1112233457889999999999999999999975
No 273
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=8.9e-34 Score=312.46 Aligned_cols=250 Identities=25% Similarity=0.390 Sum_probs=200.7
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.|+..+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++||||+++++++..+...++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3566778999999999999865 67899999887443 334467899999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++.. ..+++..+..++.|+++|++|||+. +++|+||+|+||++++++.++++|||++........
T Consensus 85 ~~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 85 GGGSALDLLKP-----GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence 99999988853 3578999999999999999999985 999999999999999999999999999987643221
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......|+..|+|||++.+..++.++||||||+++|||++|+.||...... .... ...... .+
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~---~~~~---~~~~~~------~~---- 219 (277)
T cd06642 157 -KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM---RVLF---LIPKNS------PP---- 219 (277)
T ss_pred -hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh---hHHh---hhhcCC------CC----
Confidence 122346888999999999888999999999999999999999998632111 1111 110000 00
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhh
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDG 1046 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 1046 (1052)
........++.+++.+|++.+|++||++.++++ ++..
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 220 TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 111223457889999999999999999999998 5543
No 274
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=9.9e-34 Score=310.65 Aligned_cols=251 Identities=29% Similarity=0.487 Sum_probs=197.4
Q ss_pred CeEcccCceEEEEEEECC-------CcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 777 NIIGCGGFGLVYKATLTN-------GTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~~-------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+.||+|+||.||+|...+ +..+|+|.+.... .....++.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2578999876543 23456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccC---CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCC-----CeEEeeccc
Q 001561 849 MENGSLDYWLHESVD---KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKF-----EAHLADFGL 920 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~-----~~kl~DfG~ 920 (1052)
+++++|.+++..... ....+++.+++.++.|++.|++|||+. +++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999975432 224578999999999999999999985 999999999999999887 899999999
Q ss_pred ccccCCCCC-eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccc
Q 001561 921 SRLLRPYDT-HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 921 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
++....... .......++..|+|||++.+..++.++||||||+++|||++ |+.||.... ..+....+. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~---~~~~~~~~~----~~~ 230 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN---NQEVLQHVT----AGG 230 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC---HHHHHHHHh----cCC
Confidence 976543221 11122355778999999998899999999999999999998 999986321 122222111 110
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 999 EVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
.. ......+..+.+++.+|++.+|.+||+++++++.|++
T Consensus 231 ~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 231 RL---------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred cc---------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 00 0111234578899999999999999999999999864
No 275
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=291.86 Aligned_cols=241 Identities=25% Similarity=0.344 Sum_probs=199.0
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHH---HHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREF---QAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
.++|+..++||+|.||+|..++-+ +|+-+|+|+++++.....+++ ..|-++++..+||.+..+-..|+..++.+.|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 356888999999999999999854 789999999998765444443 5688999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+.||.|.-++.+ ...+++...+.+-.+|+.||.|||+. +||.||+|.+|.|+|+||++||+|||+++.--
T Consensus 247 MeyanGGeLf~HLsr----er~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 247 MEYANGGELFFHLSR----ERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEccCceEeeehhh----hhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcc
Confidence 999999999988874 56789999999999999999999996 99999999999999999999999999998643
Q ss_pred CCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
. ....+..++|||.|+|||++....|..++|+|.+||++|||++|+.||... +...+.+-+.. .++
T Consensus 320 ~-~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~---dh~kLFeLIl~-------ed~--- 385 (516)
T KOG0690|consen 320 K-YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK---DHEKLFELILM-------EDL--- 385 (516)
T ss_pred c-ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc---chhHHHHHHHh-------hhc---
Confidence 3 234466789999999999999999999999999999999999999999632 11222221111 011
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCC
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRP 1035 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1035 (1052)
.++.....++..++...+.+||++|-
T Consensus 386 ----kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 386 ----KFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred ----cCCccCCHHHHHHHHHHhhcChHhhc
Confidence 11122233678899999999999996
No 276
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=8.9e-34 Score=316.54 Aligned_cols=257 Identities=25% Similarity=0.435 Sum_probs=201.5
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCc----EEEEEEecCCch-hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGT----KAAVKRLSGDCG-QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
++|+..+.||+|+||.||+|.+. +|. .||+|.+..... ....++.+|+.++++++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 46788899999999999999864 444 578898875432 3344688999999999999999999998754 4679
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
++||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 86 VTQLMPHGCLLDYVHEH---KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eehhcCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccc
Confidence 99999999999988753 34578999999999999999999986 9999999999999999999999999999876
Q ss_pred CCCCCee-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccccc
Q 001561 925 RPYDTHV-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI 1002 (1052)
Q Consensus 925 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
....... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+...++. .... .
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~---~~~~~~~~~----~~~~--~ 230 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP---TREIPDLLE----KGER--L 230 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHH----CCCC--C
Confidence 5332221 122345678999999988899999999999999999997 999986322 222222211 1100 0
Q ss_pred ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCcc
Q 001561 1003 IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGID 1050 (1052)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1050 (1052)
..+ ......+.+++.+|+..+|++||+++++++.|+++..+
T Consensus 231 ~~~-------~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 231 PQP-------PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 000 11223678999999999999999999999999987543
No 277
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=305.95 Aligned_cols=249 Identities=26% Similarity=0.319 Sum_probs=202.1
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
..+.|+.-++||+||||.||-+..+ +|+.+|.|++.+.. .+.+.....|-.++.+++.+.||.+-..|+..+..++
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 4467888899999999999999755 79999999886543 2334556789999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
|+..|.||+|.-++... ....+++..+..+|.+|+.||++||+. +||.||+||+|||+|+.|+++|+|.|+|..+
T Consensus 263 VLtlMNGGDLkfHiyn~--g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNH--GNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred EEEeecCCceeEEeecc--CCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEec
Confidence 99999999999888765 345799999999999999999999997 9999999999999999999999999999987
Q ss_pred CCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 925 RPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 925 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
... ......+||.+|||||++.+..|+..+|+||+||++|||+.|+.||.......-.+-+ .+...
T Consensus 338 ~~g--~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEv---drr~~--------- 403 (591)
T KOG0986|consen 338 PEG--KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEV---DRRTL--------- 403 (591)
T ss_pred CCC--CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHH---HHHHh---------
Confidence 643 3344459999999999999999999999999999999999999999632211111000 00000
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCH
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFI 1037 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1037 (1052)
.....+++..++++.++-...+.+||++|-..
T Consensus 404 -~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 404 -EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred -cchhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 00112334445578888889999999999743
No 278
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.2e-33 Score=308.00 Aligned_cols=246 Identities=25% Similarity=0.367 Sum_probs=201.4
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.|+..+.||+|+||.||+|... ++..||+|.+.... ......+.+|++++++++||||+++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4777889999999999999865 68899999987543 344567889999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++|+|.+++.. ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++........
T Consensus 85 ~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 85 GGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 99999998863 3578899999999999999999986 999999999999999999999999999977643221
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......++..|+|||+..+..++.++||||||+++|||++|+.||...... ... ..... . ...
T Consensus 157 -~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~---~~~---~~~~~-~---------~~~ 219 (277)
T cd06640 157 -KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM---RVL---FLIPK-N---------NPP 219 (277)
T ss_pred -ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH---hHh---hhhhc-C---------CCC
Confidence 223346888999999998888999999999999999999999998643211 111 10000 0 001
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.........+.+++.+|++.+|++||++.++++
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 220 TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred CCchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 122334567889999999999999999999976
No 279
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.8e-34 Score=307.53 Aligned_cols=252 Identities=22% Similarity=0.358 Sum_probs=196.9
Q ss_pred hcCCcccCeEcccCceEEEEEEECCCcEEEEEEecC--CchhhHHHHHHHHHHHHhcC-CCceeeeeceEeeCCeEEEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSG--DCGQMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 846 (1052)
.+.|++.+.||+||.+.||++...+...||+|++.. .+.+...-|..|+..|.+++ |.+||++++|-..++..|+||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 456889999999999999999988888888887653 33455677999999999995 999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||= .-+|..+|.... .....| .++.+..|++.|+.+.|.+ ||||.||||.|+|+-+ |.+||+|||.|..+..
T Consensus 440 E~G-d~DL~kiL~k~~--~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKK--SIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQP 511 (677)
T ss_pred ecc-cccHHHHHHhcc--CCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence 975 458999998642 222234 7788999999999999998 9999999999999875 6999999999999877
Q ss_pred CCCeee-ecccccccccCccccCCc-----------CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhh
Q 001561 927 YDTHVT-TDLVGTLGYIPPEYSQTL-----------TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMK 994 (1052)
Q Consensus 927 ~~~~~~-~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~ 994 (1052)
+.+... ...+||+.||+||.+... ..+.++||||+|||+|+|+.|++||.. ....++.+....
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~-----~~n~~aKl~aI~ 586 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ-----IINQIAKLHAIT 586 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH-----HHHHHHHHHhhc
Confidence 655443 346999999999976432 245789999999999999999999962 122222222222
Q ss_pred hcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 995 SEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
... .++.-+..... .++.++|+.|+..||++||++.|+++
T Consensus 587 ~P~--~~Iefp~~~~~------~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 587 DPN--HEIEFPDIPEN------DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred CCC--ccccccCCCCc------hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 211 11111111111 13899999999999999999999987
No 280
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=4.1e-36 Score=327.00 Aligned_cols=370 Identities=25% Similarity=0.395 Sum_probs=319.9
Q ss_pred CCCCCEEEcccccCC-CCCCccccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEccCCcCCCCCcccccCccccccc
Q 001561 228 SPSLKQLHVDNNLLG-GDLPDSLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFGNQFSGKLPNVLGNLTQLEFF 306 (1052)
Q Consensus 228 ~~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 306 (1052)
+|-.+-.|+++|.++ +..|.....+++++.|.|...++. .+|+.++.+.+|++|.+++|++. .+-..+..++.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 455667788888888 478889999999999999999887 78999999999999999999988 566678889999999
Q ss_pred cccCCccc-CCCCcccccCCCCcEEEecCccccCcCCcccccCCccceeecccccccCCCCccccCCCccceeecccccc
Q 001561 307 VAHSNSFS-GPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPLPNSLSDCHDLKILSLAKNEL 385 (1052)
Q Consensus 307 ~l~~N~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 385 (1052)
.+..|++. .-+|..+..+..|+.||||+|+++ ..|..+..-+++-.|+||+|+|..+.-..|.+++.|-.||||+|++
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrL 162 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRL 162 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchh
Confidence 99999986 356778889999999999999998 5677788888999999999999944445577899999999999999
Q ss_pred cccCchhhccCCcCcEEeccCCcCCCCcccchhhccCcccceEecccccc-CccCCccccCCCcccEEEccCCccccCcc
Q 001561 386 SGQVPESFGKLTSLLFLSLSNNSFNHLSGTLSVLQQCKNLTTLILTKNFV-GEEIPENVGGFESLMVLALGNCGLKGHIP 464 (1052)
Q Consensus 386 ~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N~l-~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 464 (1052)
. .+|..+..+..|+.|+|++|.+..+ .+.-+..+++|+.|.+++.+- ...+|.++.++.+|..+||+.|.+. .+|
T Consensus 163 e-~LPPQ~RRL~~LqtL~Ls~NPL~hf--QLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vP 238 (1255)
T KOG0444|consen 163 E-MLPPQIRRLSMLQTLKLSNNPLNHF--QLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVP 238 (1255)
T ss_pred h-hcCHHHHHHhhhhhhhcCCChhhHH--HHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cch
Confidence 8 6788899999999999999998764 344556677888889988654 3468999999999999999999998 899
Q ss_pred hhhhcCCCCcEEeCcCccCCCCCChhhccCCCCCeEeccCCcccccCCcchhhhhhhcccCCCCCCCCCCCCccceeecc
Q 001561 465 VWLLRCKKLQVLDLSWNHFDGNIPPWIGQMENLFYLDFSNNTLTGEIPKSLTELKSLISSNCTSSNPTASAGIPLYVKHN 544 (1052)
Q Consensus 465 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~ 544 (1052)
+.+-++++|+.|+||+|+|+ .+.-..+...+|+.|+||+|+++ .+|..+..|+.|+.
T Consensus 239 ecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~k--------------------- 295 (1255)
T KOG0444|consen 239 ECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTK--------------------- 295 (1255)
T ss_pred HHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHH---------------------
Confidence 99999999999999999998 67667778889999999999998 78999999888843
Q ss_pred ccCCCcCCCCCCCCCCeeeeecCcccc-cCCcccccccccceecccCceeeecCCCCcccccCcCeeeCCCCcCCCCCCc
Q 001561 545 RSTNGLPYNQASSFPPSVFLSNNRING-TIPPEIGQLKHLHVLDLSRNNITGTIPSSISEIRNLEVLDLSSNDLHGSIPG 623 (1052)
Q Consensus 545 ~~~~~l~~~~~~~~~~~l~Ls~N~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~LdLs~N~l~g~~p~ 623 (1052)
|.+.+|+++- -||..||+|.+|+.+..++|.+. ..|+.++.+..|+.|.|++|+|- .+|.
T Consensus 296 -----------------Ly~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPe 356 (1255)
T KOG0444|consen 296 -----------------LYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPE 356 (1255)
T ss_pred -----------------HHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echh
Confidence 5567777763 48999999999999999999999 89999999999999999999998 7999
Q ss_pred cccCccccCeeeecccccccCCC
Q 001561 624 SFEKLTFLSKFSVANNHLQGTIP 646 (1052)
Q Consensus 624 ~~~~l~~L~~l~l~~N~l~g~~p 646 (1052)
.+--|+.|..|||.+|.----+|
T Consensus 357 aIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 357 AIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred hhhhcCCcceeeccCCcCccCCC
Confidence 99999999999999996544444
No 281
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.6e-33 Score=312.01 Aligned_cols=261 Identities=24% Similarity=0.343 Sum_probs=199.3
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36888999999999999999876 58999999876432 2234568899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|++++.+.++... ...+++.++..++.|+++|++|||+. +++|||++|+||++++++.++++|||++......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 81 FVDHTVLDDLEKY----PNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred cCCccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 9999998877653 33489999999999999999999986 9999999999999999999999999999875433
Q ss_pred CCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhc----------
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSE---------- 996 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~---------- 996 (1052)
. .......++..|+|||+..+ ..++.++||||||+++|||++|++||..... .+...........
T Consensus 154 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07846 154 G-EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD---IDQLYHIIKCLGNLIPRHQEIFQ 229 (286)
T ss_pred c-cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch---HHHHHHHHHHhCCCchhhHHHhc
Confidence 2 22334568899999998765 4578899999999999999999999863221 1111111110000
Q ss_pred -ccc-cccccccccc-----hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 997 -KRE-VEIIDASIWH-----KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 997 -~~~-~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
... .....+.... .........+.+++.+|++.+|++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 230 KNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred cchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000 0000000000 001123457899999999999999999999875
No 282
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.9e-33 Score=303.00 Aligned_cols=247 Identities=27% Similarity=0.426 Sum_probs=199.7
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-----hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-----GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
+|+..+.||+|++|.||+|... +++.||+|.+.... .+..+.+.+|++++++++|+||+++++++.++...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777899999999999999876 78999999886432 23456789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
+||+++++|.+++.. ...+++..+..++.|+++|++|||+. +|+|+||+|+||+++.++.+||+|||.+....
T Consensus 81 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 81 LELVPGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 999999999999874 23578999999999999999999986 99999999999999999999999999988754
Q ss_pred CCCCeeeecccccccccCccccCCcC-CCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQTLT-ATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
... ......|++.|+|||...... ++.++|+||||+++|+|++|+.||.... . ...............
T Consensus 154 ~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~---~---~~~~~~~~~~~~~~~--- 222 (258)
T cd06632 154 EFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE---G---VAAVFKIGRSKELPP--- 222 (258)
T ss_pred ccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc---H---HHHHHHHHhcccCCC---
Confidence 322 223456889999999887666 8999999999999999999999996422 1 111111111111111
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+......+.+++.+|++.+|.+||++.++++
T Consensus 223 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 223 ------IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ------cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 11122346789999999999999999999975
No 283
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4.2e-33 Score=303.49 Aligned_cols=251 Identities=30% Similarity=0.476 Sum_probs=201.6
Q ss_pred CcccCeEcccCceEEEEEEECC-----CcEEEEEEecCCchh-hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 773 FNQANIIGCGGFGLVYKATLTN-----GTKAAVKRLSGDCGQ-MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
|++.+.||+|+||.||+|...+ +..||+|++...... ..+.+..|+++++.++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567889999999999998763 378999998755433 5668899999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.++++|||.+.....
T Consensus 81 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 81 EYMEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred eccCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 9999999999987532 12289999999999999999999986 999999999999999999999999999987654
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
..........+++.|+|||...+..++.++||||+|+++|+|++ |++||.. ....+..+.+.... ....
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~---~~~~~~~~~~~~~~----~~~~--- 225 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPG---MSNEEVLEYLKKGY----RLPK--- 225 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCC---CCHHHHHHHHhcCC----CCCC---
Confidence 32222212346789999999988889999999999999999998 8888864 22222222221111 0000
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWL 1044 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1044 (1052)
....+.++.+++.+|+..+|++|||+.|++++|
T Consensus 226 ------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 226 ------PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ------CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 111344788999999999999999999999864
No 284
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.2e-33 Score=302.81 Aligned_cols=255 Identities=27% Similarity=0.456 Sum_probs=208.9
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch-hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG-QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
+|++.+.||+|++|.||+|... +++.||+|++..... ....++.+|++++.+++|+|++++++++..+...++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 6888999999999999999876 589999999876543 44577999999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHK-VCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
++++|.+++... ..+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++++|||.+.......
T Consensus 82 ~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 82 DGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred CCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 999999998753 568999999999999999999998 6 99999999999999999999999999998765432
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.. .....++..|+|||...+..++.++||||||+++|+|++|+.||......+..+...++.. .....
T Consensus 155 ~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~----~~~~~------- 222 (264)
T cd06623 155 DQ-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD----GPPPS------- 222 (264)
T ss_pred Cc-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc----CCCCC-------
Confidence 22 2234678899999999888899999999999999999999999965432222233322221 11100
Q ss_pred chhhHH-HHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 1009 HKDREK-QLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 1009 ~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
.... .+..+.+++.+|++.+|++||++.|+++ +++.+
T Consensus 223 --~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 223 --LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred --CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 0111 3347899999999999999999999998 45443
No 285
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.4e-33 Score=306.64 Aligned_cols=247 Identities=27% Similarity=0.452 Sum_probs=197.7
Q ss_pred cCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEecc
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
++|++.+.||+|+||.||+|.. +++.||+|.+..+. ....+.+|+.++++++|||++++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4688899999999999999975 57889999987543 235688999999999999999999998654 4799999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+++|.+++... ....+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.......
T Consensus 82 ~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~-- 154 (254)
T cd05083 82 KGNLVNFLRTR--GRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV-- 154 (254)
T ss_pred CCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC--
Confidence 99999998753 234578999999999999999999986 99999999999999999999999999997643211
Q ss_pred eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 931 VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
.....+..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+..... . ......
T Consensus 155 --~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~---~~~~~~~~---~-~~~~~~-------- 217 (254)
T cd05083 155 --DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS---LKEVKECV---E-KGYRME-------- 217 (254)
T ss_pred --CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC---HHHHHHHH---h-CCCCCC--------
Confidence 12234568999999988889999999999999999997 999986422 11111111 1 111000
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
.....+..+.+++.+|++.+|++||+++++++.|++
T Consensus 218 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 218 -PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 011223478899999999999999999999998864
No 286
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.9e-33 Score=307.64 Aligned_cols=253 Identities=27% Similarity=0.410 Sum_probs=196.4
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHH-HHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEA-LSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
++|++.+.||+|+||.||+|... +|+.||+|++.... ...+.++..|+.. ++..+||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36888999999999999999875 68999999987543 2334456666665 566689999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|++ |+|.+++.........+++..++.++.|++.|++|||+. .+++||||||+||+++.++.+||+|||.+......
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 996 688888876544556789999999999999999999973 38999999999999999999999999999865422
Q ss_pred CCeeeecccccccccCccccCC----cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQT----LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEII 1003 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
. ......|+..|+|||.+.+ ..++.++|+||||+++|||++|+.||.... +..+... ..... ......
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~---~~~~~-~~~~~~ 229 (283)
T cd06617 158 V--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK--TPFQQLK---QVVEE-PSPQLP 229 (283)
T ss_pred c--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccc--cCHHHHH---HHHhc-CCCCCC
Confidence 1 1223468889999998754 456889999999999999999999986321 1111111 11111 001110
Q ss_pred cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1004 DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
....+.++.+++.+|+..+|++||++.++++
T Consensus 230 --------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 230 --------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred --------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0113347899999999999999999999987
No 287
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.5e-33 Score=310.16 Aligned_cols=256 Identities=28% Similarity=0.427 Sum_probs=202.5
Q ss_pred HhhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCC-----
Q 001561 768 KSTNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGN----- 840 (1052)
Q Consensus 768 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~----- 840 (1052)
...++|++.+.||+|++|.||+|... +++.+|+|++..... ..+++.+|+++++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 34678999999999999999999875 678999999875543 346789999999999 6999999999997644
Q ss_pred -eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecc
Q 001561 841 -DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFG 919 (1052)
Q Consensus 841 -~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG 919 (1052)
..++||||+++++|.+++.........+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++++|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCc
Confidence 48999999999999999876544456789999999999999999999986 99999999999999999999999999
Q ss_pred cccccCCCCCeeeecccccccccCccccCC-----cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhh
Q 001561 920 LSRLLRPYDTHVTTDLVGTLGYIPPEYSQT-----LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMK 994 (1052)
Q Consensus 920 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~ 994 (1052)
.+....... .......|++.|+|||++.. ..++.++||||||+++|+|++|+.||.... ..... ....
T Consensus 159 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~---~~~~ 231 (275)
T cd06608 159 VSAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMH---PMRAL---FKIP 231 (275)
T ss_pred cceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccc---hHHHH---HHhh
Confidence 997654322 22233568999999997643 346788999999999999999999996321 11111 1111
Q ss_pred hcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 995 SEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.. ..... ........++.+++.+|+..||++|||+.|+++
T Consensus 232 ~~-~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 232 RN-PPPTL-------KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred cc-CCCCC-------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11 01011 111224457889999999999999999999976
No 288
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.7e-33 Score=310.70 Aligned_cols=247 Identities=22% Similarity=0.343 Sum_probs=198.6
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
|.....||+|+||.||+|... ++..||+|++........+.+.+|+.++++++||||+++++.+..++..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 334567999999999999864 6889999998765555567789999999999999999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
++|.+++.. ..+++.++..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++........ .
T Consensus 104 ~~L~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-~ 174 (292)
T cd06658 104 GALTDIVTH-----TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-K 174 (292)
T ss_pred CcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-c
Confidence 999998753 3478999999999999999999986 999999999999999999999999999976543222 2
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
.....|++.|+|||...+..++.++||||||+++|||++|+.||.... ...... .... . .......
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~---~~~~~~---~~~~-~-----~~~~~~~-- 240 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP---PLQAMR---RIRD-N-----LPPRVKD-- 240 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHH---HHHh-c-----CCCcccc--
Confidence 233578999999999988889999999999999999999999986321 111111 1110 0 0000000
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.......+.+++.+|+..||.+||++.|+++
T Consensus 241 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 241 SHKVSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1112336889999999999999999999997
No 289
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=6.8e-33 Score=311.90 Aligned_cols=196 Identities=26% Similarity=0.359 Sum_probs=159.5
Q ss_pred cCeEcccCceEEEEEEEC---CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEee--CCeEEEEEEecc
Q 001561 776 ANIIGCGGFGLVYKATLT---NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRH--GNDRLLIYSYME 850 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 850 (1052)
...||+|+||+||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 357999999999999865 35789999887543 23457889999999999999999998854 456789999987
Q ss_pred CCChhhhhhccc-----CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEE----CCCCCeEEeecccc
Q 001561 851 NGSLDYWLHESV-----DKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILL----DEKFEAHLADFGLS 921 (1052)
Q Consensus 851 ~g~L~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill----~~~~~~kl~DfG~a 921 (1052)
+ +|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5 6766664321 1233588999999999999999999986 99999999999999 56789999999999
Q ss_pred cccCCCCCe--eeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcc
Q 001561 922 RLLRPYDTH--VTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEV 977 (1052)
Q Consensus 922 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~ 977 (1052)
+........ ......||+.|+|||++.+ ..++.++|||||||++|||+||++||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 876433221 2234578999999998766 4578999999999999999999999964
No 290
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.3e-33 Score=304.89 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=195.4
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-----hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC--CeE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-----GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG--NDR 842 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 842 (1052)
.+|++.+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999865 68999999875321 22335678899999999999999999988764 467
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||.++
T Consensus 82 ~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY----GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccc
Confidence 8999999999999988642 3478888999999999999999986 99999999999999999999999999998
Q ss_pred ccCCCCC--eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 923 LLRPYDT--HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 923 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
....... .......|+..|+|||...+..++.++||||||+++|||++|+.||.... ... ..........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~---~~~---~~~~~~~~~~-- 226 (265)
T cd06652 155 RLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE---AMA---AIFKIATQPT-- 226 (265)
T ss_pred ccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc---hHH---HHHHHhcCCC--
Confidence 6543211 11233468899999999888889999999999999999999999996321 111 1111111100
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
. ...+......+.+++.+|+. +|++||+++|+++
T Consensus 227 ---~----~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 227 ---N----PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred ---C----CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0 11122334567889999985 9999999999975
No 291
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.5e-33 Score=305.07 Aligned_cols=249 Identities=23% Similarity=0.384 Sum_probs=201.1
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCC--chhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGD--CGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|+..+.||+|+||.||++... +|+.||+|++... .....+++.+|++++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4888999999999999999865 6889999998643 233446789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++++|.+++... ....+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 81 CEGGDLYKKINAQ--RGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 9999999988753 234578899999999999999999986 99999999999999999999999999998654322
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
. ......|++.|+|||+..+..++.++||||||+++|+|++|+.||... +..+... ...... ...
T Consensus 156 ~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~---~~~~~~~---~~~~~~-~~~------- 220 (256)
T cd08218 156 E-LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG---NMKNLVL---KIIRGS-YPP------- 220 (256)
T ss_pred h-hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC---CHHHHHH---HHhcCC-CCC-------
Confidence 1 122346888999999998888999999999999999999999998632 1112111 111110 000
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+.....++.+++.+|++.+|.+||++.||++
T Consensus 221 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 221 --VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred --CcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 11122346899999999999999999999986
No 292
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=9.6e-33 Score=302.39 Aligned_cols=257 Identities=28% Similarity=0.455 Sum_probs=204.1
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
++|++.+.||.|+||+||+|... ++..+|+|++.... ....+.+.+|+++++.++|+|++++++.+..++..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46889999999999999999865 67899999987543 33456789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++++|.++++.... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.++++|||++..+....
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 81 LSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred cCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 999999999875322 34689999999999999999999986 99999999999999999999999999998765433
Q ss_pred Ce---eeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 929 TH---VTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 929 ~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
.. ......|+..|+|||++... .++.++||||||+++|||++|+.||...... ....... .... .. ..
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--~~~~~~~----~~~~-~~-~~ 228 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM--KVLMLTL----QNDP-PS-LE 228 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh--hhHHHHh----cCCC-CC-cC
Confidence 22 22334789999999987766 7899999999999999999999999643211 1111111 1100 00 00
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.. ......+.++.+++.+|++.+|++||++.|+++
T Consensus 229 ~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 229 TG---ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred Cc---cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00 001123457889999999999999999999975
No 293
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.4e-33 Score=305.64 Aligned_cols=252 Identities=29% Similarity=0.435 Sum_probs=203.2
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
+|+..+.||.|++|.||+|... +++.||+|++.... ....+++.+|++++++++||||+++++++..+...++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5777889999999999999876 68899999987653 345567899999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHK-VCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
++++|.+++.... ..+++..+..++.|++.|++|||+ . +++||||||+||++++++.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 82 DGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred CCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 9999999987532 568899999999999999999998 5 99999999999999999999999999987654322
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.. ...++..|+|||...+..++.++||||||+++|+|++|+.||..... ......+.+...... .....
T Consensus 156 ~~---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~-~~~~~------ 224 (265)
T cd06605 156 AK---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPEND-PPDGIFELLQYIVNE-PPPRL------ 224 (265)
T ss_pred hh---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccc-ccccHHHHHHHHhcC-CCCCC------
Confidence 11 25788899999999888999999999999999999999999964321 111122211111111 00000
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.......++.++|.+|+..+|++||++.|++.
T Consensus 225 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 225 --PSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred --ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 00113457889999999999999999999986
No 294
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3e-33 Score=314.54 Aligned_cols=256 Identities=25% Similarity=0.311 Sum_probs=203.3
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|+..+.||+|++|+||+|... +++.||+|.+..... ...+.+..|++++++++||||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999876 589999999876532 24456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++++|.+++... ....+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 81 DYCPGGELFRLLQRQ--PGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EecCCCCHHHHHHhC--CCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 999999999988743 245689999999999999999999986 999999999999999999999999999876532
Q ss_pred CCCe----------------------------eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCccc
Q 001561 927 YDTH----------------------------VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVC 978 (1052)
Q Consensus 927 ~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~ 978 (1052)
.... ......||..|+|||+..+..++.++||||||+++|+|++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 2110 111246889999999998888999999999999999999999999643
Q ss_pred CCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCC----HHHHHH--HHhh
Q 001561 979 KGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPF----IEEVVT--WLDG 1046 (1052)
Q Consensus 979 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~--~L~~ 1046 (1052)
.. ......+ ..... . ..........+.+++.+|++.+|++||+ +.|+++ ++++
T Consensus 236 ~~---~~~~~~~---~~~~~--~-------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~ 294 (316)
T cd05574 236 NR---DETFSNI---LKKEV--T-------FPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG 294 (316)
T ss_pred ch---HHHHHHH---hcCCc--c-------CCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence 21 1111111 11000 0 0001113457899999999999999999 777766 4444
No 295
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.3e-33 Score=319.26 Aligned_cols=240 Identities=26% Similarity=0.294 Sum_probs=185.1
Q ss_pred EcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHHHHHhc---CCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 779 IGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVEALSRA---QHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 779 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
||+|+||+||+|+.. +++.||+|++..... .....+..|..++.+. +||+|+++++++.+.+..|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999865 689999999864321 1223345566666655 699999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~ 152 (330)
T cd05586 81 GELFWHLQK----EGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KT 152 (330)
T ss_pred ChHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CC
Confidence 999988864 44689999999999999999999986 99999999999999999999999999997643222 22
Q ss_pred eecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccch
Q 001561 932 TTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHK 1010 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
....+||+.|+|||++.+. .++.++||||+||++|||++|+.||... +..+....+. ... ..+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~---~~~~~~~~i~----~~~-~~~~~------ 218 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE---DTQQMYRNIA----FGK-VRFPK------ 218 (330)
T ss_pred ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC---CHHHHHHHHH----cCC-CCCCC------
Confidence 3346799999999987654 5789999999999999999999999632 1112111111 000 01100
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCC----CHHHHHH
Q 001561 1011 DREKQLLEMLEIACKCIDQDPRRRP----FIEEVVT 1042 (1052)
Q Consensus 1011 ~~~~~~~~l~~li~~cl~~dP~~RP----s~~evl~ 1042 (1052)
......+.+++.+|++.||++|| ++.|+++
T Consensus 219 --~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 219 --NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred --ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 01233678999999999999998 5666655
No 296
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=5.7e-33 Score=305.15 Aligned_cols=253 Identities=25% Similarity=0.427 Sum_probs=197.8
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch----------hhHHHHHHHHHHHHhcCCCceeeeeceEeeCC
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG----------QMEREFQAEVEALSRAQHKNLVSLQGYCRHGN 840 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 840 (1052)
+|.+.+.||+|+||.||+|... +|+.||+|.++.... ...+.+.+|+.++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4777899999999999999754 689999998753211 12245788999999999999999999999999
Q ss_pred eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccc
Q 001561 841 DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGL 920 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~ 920 (1052)
..++||||+++++|.++++.. ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY----GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccc
Confidence 999999999999999998753 4688999999999999999999986 999999999999999999999999999
Q ss_pred ccccCCCCCe-eeecccccccccCccccCCcC--CCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcc
Q 001561 921 SRLLRPYDTH-VTTDLVGTLGYIPPEYSQTLT--ATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEK 997 (1052)
Q Consensus 921 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
++........ ......|+..|+|||...... ++.++||||||+++||+++|+.||.... ............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~ 228 (272)
T cd06629 155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE------AIAAMFKLGNKR 228 (272)
T ss_pred cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcc------hHHHHHHhhccc
Confidence 9765432111 123356889999999876644 7899999999999999999999985321 111111111111
Q ss_pred cccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 998 REVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 998 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.... +... ........+.+++.+|+.++|.+||++.||++
T Consensus 229 ~~~~-~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 229 SAPP-IPPD----VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cCCc-CCcc----ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 1111 1111 11123457899999999999999999999985
No 297
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=8.3e-33 Score=304.04 Aligned_cols=256 Identities=26% Similarity=0.437 Sum_probs=199.0
Q ss_pred CcccCeEcccCceEEEEEEEC----CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCC------
Q 001561 773 FNQANIIGCGGFGLVYKATLT----NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGN------ 840 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 840 (1052)
|++.++||+|+||.||+|.+. ++..||+|++.... ....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999754 36789999987542 334567889999999999999999999886532
Q ss_pred eEEEEEEeccCCChhhhhhccc--CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeec
Q 001561 841 DRLLIYSYMENGSLDYWLHESV--DKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADF 918 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~Df 918 (1052)
..++++||+++|+|.+++.... .....+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2478899999999988875432 1223578899999999999999999985 9999999999999999999999999
Q ss_pred ccccccCCCCCee-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhc
Q 001561 919 GLSRLLRPYDTHV-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSE 996 (1052)
Q Consensus 919 G~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~ 996 (1052)
|.++......... .....+++.|++||......++.++||||||+++|||++ |++||... +..+...+... .
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~---~~~~~~~~~~~---~ 231 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGV---ENSEIYNYLIK---G 231 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCC---CHHHHHHHHHc---C
Confidence 9998764322211 122345678999999988889999999999999999999 89998632 11222222111 1
Q ss_pred ccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 997 KREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
.. .. ........+.+++.+|++.+|++||++.|+++.|+++
T Consensus 232 ~~-~~---------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 232 NR-LK---------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred Cc-CC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 00 0011234789999999999999999999999999876
No 298
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=7.9e-33 Score=308.42 Aligned_cols=264 Identities=22% Similarity=0.305 Sum_probs=201.6
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchh-----hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQ-----MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
+|+..+.||+|++|.||+|... +++.||+|++...... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778889999999999999865 6899999998754322 345567899999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+ +|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||+++...
T Consensus 81 ~e~~-~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 81 FEFM-ETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred Eccc-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9999 89999998753 23689999999999999999999986 99999999999999999999999999998765
Q ss_pred CCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc----
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV---- 1000 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---- 1000 (1052)
.... ......+++.|+|||.+.+ ..++.++|||||||++|||++|.+||.... ..+...............
T Consensus 154 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 229 (298)
T cd07841 154 SPNR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS---DIDQLGKIFEALGTPTEENWPG 229 (298)
T ss_pred CCCc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc---cHHHHHHHHHHcCCCchhhhhh
Confidence 4322 2223456889999998754 467889999999999999999988886322 112222222111100000
Q ss_pred -----cccccccc-----chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhh
Q 001561 1001 -----EIIDASIW-----HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDG 1046 (1052)
Q Consensus 1001 -----~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 1046 (1052)
........ ..........+.+++.+|++++|++||++.|+++ ++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~ 287 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSN 287 (298)
T ss_pred cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccC
Confidence 00000000 0011223457889999999999999999999998 4554
No 299
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.5e-32 Score=300.24 Aligned_cols=251 Identities=31% Similarity=0.456 Sum_probs=201.3
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch--hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG--QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|+..+.||+|+||.||+|... ++..||+|.+..... ...+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4788899999999999999865 788999999876544 3567789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++++|.+++.. ...+++..+..++.++++|++|||+. +|+|+||+|+||++++++.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 81 CSGGTLEELLEH----GRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCCcHHHHHhh----cCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 999999999874 34578899999999999999999986 99999999999999999999999999998765433
Q ss_pred Ceee---ecccccccccCccccCCcC---CCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccc
Q 001561 929 THVT---TDLVGTLGYIPPEYSQTLT---ATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI 1002 (1052)
Q Consensus 929 ~~~~---~~~~gt~~y~aPE~~~~~~---~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
.... ....+++.|+|||++.... ++.++||||||+++||+++|+.||.... .. ......... .....+
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~--~~---~~~~~~~~~-~~~~~~ 227 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELD--NE---FQIMFHVGA-GHKPPI 227 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCc--ch---HHHHHHHhc-CCCCCC
Confidence 2221 1356788999999987766 8899999999999999999999996422 11 111111111 100011
Q ss_pred ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1003 IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
. ........+.+++.+|++.+|.+||++.|++.
T Consensus 228 ~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 228 P-------DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred C-------cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 11112346789999999999999999999874
No 300
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.9e-33 Score=308.86 Aligned_cols=254 Identities=22% Similarity=0.371 Sum_probs=204.2
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
++|++.+.||+|+||.||+|... ++..||+|.+........+.+.+|+.++++++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 57889999999999999999754 68899999987555455567899999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 99 AGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred CCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 99999998864 2478889999999999999999986 999999999999999999999999999876544322
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......|++.|+|||......++.++||||||+++|++++|+.||....... .. ....... ....
T Consensus 171 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~---~~---~~~~~~~--------~~~~ 235 (293)
T cd06647 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---AL---YLIATNG--------TPEL 235 (293)
T ss_pred -ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh---he---eehhcCC--------CCCC
Confidence 2233468889999999888888999999999999999999999996422111 00 0000000 0001
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
.........+.+++.+|++.+|++||++.+++. +++..
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~ 275 (293)
T cd06647 236 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIA 275 (293)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcC
Confidence 111223346889999999999999999999987 44433
No 301
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.7e-33 Score=309.11 Aligned_cols=262 Identities=23% Similarity=0.355 Sum_probs=196.4
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch-hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG-QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
++|++.+.||+|++|.||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57889999999999999999866 689999999865432 2234567899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||.++......
T Consensus 85 ~~~-~L~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 85 LDT-DLKQYMDDC---GGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred CCC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 985 898888653 34688999999999999999999986 99999999999999999999999999987543211
Q ss_pred CeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccc---c--
Q 001561 929 THVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVE---I-- 1002 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---~-- 1002 (1052)
.......++..|+|||+..+ ..++.++||||+|+++|||++|+.||..... ..+....+........... .
T Consensus 158 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07844 158 -KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTD--VEDQLHKIFRVLGTPTEETWPGVSS 234 (291)
T ss_pred -ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCcc--HHHHHHHHHHhcCCCChhhhhhhhh
Confidence 11122356889999998765 5578899999999999999999999964321 1111111111110000000 0
Q ss_pred -----------ccccccchh--hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1003 -----------IDASIWHKD--REKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1003 -----------~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
......... .......+.+++.+|++.+|++||++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 235 NPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000000000 0011146789999999999999999999875
No 302
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=316.54 Aligned_cols=270 Identities=26% Similarity=0.326 Sum_probs=205.0
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCC------eEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGN------DRL 843 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~ 843 (1052)
.+...+.||+|+||.||+|+.+ +|+.||||.+.... ....+.+.+|++++++++|+|||++++.-++.. ...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 3455778999999999999954 89999999998654 344567889999999999999999999865433 568
Q ss_pred EEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC--CCCC--eEEeecc
Q 001561 844 LIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD--EKFE--AHLADFG 919 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~--~~~~--~kl~DfG 919 (1052)
+|||||.+|+|...+++.. ....+++.+.+.+..+++.|+.|||++ +|+||||||.||++- ++|+ .||+|||
T Consensus 94 lvmEyC~gGsL~~~L~~PE-N~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPE-NAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred EEEeecCCCcHHHHhcCcc-cccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 9999999999999998765 355699999999999999999999986 999999999999984 4444 6999999
Q ss_pred cccccCCCCCeeeecccccccccCccccC-CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc
Q 001561 920 LSRLLRPYDTHVTTDLVGTLGYIPPEYSQ-TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 920 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
.|+.++.. ......+||..|.+||+.. .+.|+..+|.|||||++|+.+||..||....++.....+.|..-......
T Consensus 170 ~Arel~d~--s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 170 AARELDDN--SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred ccccCCCC--CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 99988643 3566789999999999988 48889999999999999999999999986544322222223222221111
Q ss_pred cccccccccc------------chhhHHHHHHHHHHHHHcccCCCCCCC--CHHHHHHHHhhc
Q 001561 999 EVEIIDASIW------------HKDREKQLLEMLEIACKCIDQDPRRRP--FIEEVVTWLDGI 1047 (1052)
Q Consensus 999 ~~~~~~~~~~------------~~~~~~~~~~l~~li~~cl~~dP~~RP--s~~evl~~L~~i 1047 (1052)
.......... ..........+...+..++..+|++|- ...+....+.+|
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI 310 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI 310 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence 1111111111 111233445667788888999999998 666666555544
No 303
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=7.3e-33 Score=305.20 Aligned_cols=252 Identities=25% Similarity=0.434 Sum_probs=200.7
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcC---CCceeeeeceEeeCCeEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQ---HKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 846 (1052)
.|+..+.||+|+||.||+|... ++..||+|.+.... .....++.+|+.++++++ |||++++++++.++...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4777889999999999999864 78999999987543 334456889999999997 999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++++|.++++. ..+++..++.++.|+++|++|||+. +|+||||+|+||++++++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 82 EYAEGGSVRTLMKA-----GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred ecCCCCcHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 99999999998864 2688999999999999999999986 999999999999999999999999999987654
Q ss_pred CCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
... ......|+..|+|||...+ ..++.++||||||+++|+|++|+.||..... ..+...... ... +
T Consensus 154 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~------~~~~~~~~~-~~~-----~ 220 (277)
T cd06917 154 NSS-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA------FRAMMLIPK-SKP-----P 220 (277)
T ss_pred Ccc-ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh------hhhhhcccc-CCC-----C
Confidence 332 2234578999999998764 4568899999999999999999999963211 111111000 000 1
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
..... ....++.+++.+|++.||++||++.|+++ ++++.
T Consensus 221 ~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~ 261 (277)
T cd06917 221 RLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAH 261 (277)
T ss_pred CCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcc
Confidence 11110 13347889999999999999999999987 55443
No 304
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=5.9e-33 Score=312.25 Aligned_cols=267 Identities=24% Similarity=0.306 Sum_probs=197.4
Q ss_pred CCcccCeEcccCceEEEEEEEC---CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC--CeEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT---NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG--NDRL 843 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 843 (1052)
+|++.+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999865 47899999988633 33345678899999999999999999999888 7899
Q ss_pred EEEEeccCCChhhhhhcccCC-ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC----CCCeEEeec
Q 001561 844 LIYSYMENGSLDYWLHESVDK-DSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE----KFEAHLADF 918 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~----~~~~kl~Df 918 (1052)
+||||+++ ++.+++...... ...+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+|++||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 566666543332 33789999999999999999999986 9999999999999999 999999999
Q ss_pred ccccccCCCCC--eeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCc------hhHHHH
Q 001561 919 GLSRLLRPYDT--HVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNC------RDLVSW 989 (1052)
Q Consensus 919 G~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~------~~~~~~ 989 (1052)
|+++....... .......+++.|+|||++.+ ..++.++||||||+++|||++|++||........ .+....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99987643322 11223468899999997765 4578999999999999999999999975432210 011111
Q ss_pred HHHhhhccc------------ccc--------ccc-ccccchhhH--HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 990 VFQMKSEKR------------EVE--------IID-ASIWHKDRE--KQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 990 ~~~~~~~~~------------~~~--------~~~-~~~~~~~~~--~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+........ ... ... ......... ....++.+++.+|+++||++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111100000 000 000 000000000 23347889999999999999999999975
No 305
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=9.8e-33 Score=306.51 Aligned_cols=264 Identities=22% Similarity=0.277 Sum_probs=195.8
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++++|++.+.||+|+||.||+|... ++..||+|++.... ......+.+|++++++++|+||+++++++.+++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 3567999999999999999999864 68999999986543 222345778999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||++ +++.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 83 e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 83 EYMH-TDLAQYMIQH---PGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred eccc-CCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 9996 6776666432 34577888999999999999999986 999999999999999999999999999976432
Q ss_pred CCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcc--------
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEK-------- 997 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~-------- 997 (1052)
.. .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||+.... ..+............
T Consensus 156 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 232 (291)
T cd07870 156 PS-QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD--VFEQLEKIWTVLGVPTEDTWPGV 232 (291)
T ss_pred CC-CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchh--HHHHHHHHHHHcCCCChhhhhhh
Confidence 21 11233467899999998765 4578899999999999999999999974321 111111111100000
Q ss_pred -----cccccccccccchh-----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 998 -----REVEIIDASIWHKD-----REKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 998 -----~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.............. .......+.+++.+|++.||++|||+.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 233 SKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000000000 0011346789999999999999999999874
No 306
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.4e-32 Score=299.03 Aligned_cols=248 Identities=23% Similarity=0.406 Sum_probs=200.2
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|+..+.||+|+||.||+|... +++.+|+|++.... ....+.+.+|++++++++|||++++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4788999999999999999864 68899999986542 33456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCC-CCeEEeecccccccCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEK-FEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~-~~~kl~DfG~a~~~~~~ 927 (1052)
+++++|.+++... ....+++..+..++.++++|++|||+. +++||||||+||+++++ +.+|++|||.+......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 81 APGGTLAEYIQKR--CNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCCHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 9999999999753 244588999999999999999999986 99999999999999865 45899999999876432
Q ss_pred CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASI 1007 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
. ......|+..|+|||...+..++.++||||||+++|+|++|+.||.... .......... .. ...+
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~---~~~~~~~~~~---~~-~~~~----- 221 (256)
T cd08220 156 S--KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN---LPALVLKIMS---GT-FAPI----- 221 (256)
T ss_pred c--cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc---hHHHHHHHHh---cC-CCCC-----
Confidence 2 1223568899999999988889999999999999999999999986421 1122211111 10 0011
Q ss_pred cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1008 WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
......++.+++.+|++.+|++|||+.|+++
T Consensus 222 ----~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 222 ----SDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ----CCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1112346889999999999999999999986
No 307
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.9e-33 Score=331.72 Aligned_cols=267 Identities=20% Similarity=0.236 Sum_probs=189.3
Q ss_pred hcCCcccCeEcccCceEEEEEEECC--CcEEEEEEe--------------c---CCchhhHHHHHHHHHHHHhcCCCcee
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTN--GTKAAVKRL--------------S---GDCGQMEREFQAEVEALSRAQHKNLV 830 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~--g~~vavK~~--------------~---~~~~~~~~~~~~E~~~l~~l~h~niv 830 (1052)
.++|++.+.||+|+||+||+|..+. +..+++|.+ . .........+.+|++++++++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 4689999999999999999987542 222222211 0 01122345688999999999999999
Q ss_pred eeeceEeeCCeEEEEEEeccCCChhhhhhccc-CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC
Q 001561 831 SLQGYCRHGNDRLLIYSYMENGSLDYWLHESV-DKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE 909 (1052)
Q Consensus 831 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~ 909 (1052)
++++++.+.+..|+|+|++. +++.+++.... ..........+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNC 302 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC
Confidence 99999999999999999985 46666654322 1122334567788999999999999986 9999999999999999
Q ss_pred CCCeEEeecccccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCC-CcccCCCCchhHHH
Q 001561 910 KFEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRP-VEVCKGKNCRDLVS 988 (1052)
Q Consensus 910 ~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~p-f~~~~~~~~~~~~~ 988 (1052)
++.+||+|||+++.+...........+||+.|+|||++.+..++.++|||||||++|||++|..+ +..........+..
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~ 382 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLK 382 (501)
T ss_pred CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHH
Confidence 99999999999987754433333456899999999999999999999999999999999998754 43222222222221
Q ss_pred HHHHhhhcccccccccc----------cc----cchhh-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 989 WVFQMKSEKREVEIIDA----------SI----WHKDR-----EKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 989 ~~~~~~~~~~~~~~~~~----------~~----~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+.. .... ..++.+. .. ..... ......+.+++.+|++.||++||++.|+++
T Consensus 383 ~~~~-~~~~-~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 383 IIDS-LSVC-DEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHh-cccC-hhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 1111 0000 0000000 00 00000 011235678899999999999999999987
No 308
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-34 Score=312.36 Aligned_cols=250 Identities=23% Similarity=0.380 Sum_probs=202.5
Q ss_pred CCcccCeEcccCceEEEEEEECC-CcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEecc
Q 001561 772 NFNQANIIGCGGFGLVYKATLTN-GTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
.|+++.-||-|+||.||+|..++ +--.|.|++.....+..+++.-|++++..+.||+||++++.|...+..|++.|||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 35667779999999999998764 44457788877767777789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
||-.+..+-+ -+..+++.++..+.+|++.||.|||+. .|||||+|+.|||++-+|.++++|||.+..... ...
T Consensus 113 GGAVDaimlE---L~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~q 185 (1187)
T KOG0579|consen 113 GGAVDAIMLE---LGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQ 185 (1187)
T ss_pred CchHhHHHHH---hccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchh-HHh
Confidence 9999888765 467899999999999999999999996 999999999999999999999999999865322 222
Q ss_pred eeecccccccccCcccc-----CCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 931 VTTDLVGTLGYIPPEYS-----QTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
....++|||+|||||++ ...+|++++||||||+++.||..+.+|-... .....+.......+ ..+..
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel------npMRVllKiaKSeP-PTLlq- 257 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL------NPMRVLLKIAKSEP-PTLLQ- 257 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc------chHHHHHHHhhcCC-CcccC-
Confidence 33457999999999975 4578999999999999999999999996421 11111111111111 11122
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+..+...+.+++.+|+..+|..||+++++++
T Consensus 258 ------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 258 ------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred ------cchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 2345567899999999999999999999986
No 309
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=7.8e-33 Score=307.80 Aligned_cols=247 Identities=22% Similarity=0.337 Sum_probs=198.0
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
|+....||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++++..++..++|+||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 334557999999999999865 6899999998754444556788999999999999999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
++|.+++.. ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.++|+|||++....... ..
T Consensus 103 ~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~ 173 (297)
T cd06659 103 GALTDIVSQ-----TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PK 173 (297)
T ss_pred CCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc-cc
Confidence 999887743 3578999999999999999999986 99999999999999999999999999997654322 12
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
.....|++.|+|||++.+..++.++||||||+++|||++|+.||.... ..+.... .... ..... ..
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~---~~~~~~~---~~~~-~~~~~-------~~ 239 (297)
T cd06659 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS---PVQAMKR---LRDS-PPPKL-------KN 239 (297)
T ss_pred ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHH---Hhcc-CCCCc-------cc
Confidence 233578999999999988889999999999999999999999996321 1111111 1111 00000 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.......+.+++.+|++.+|++||++.|+++
T Consensus 240 ~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 240 AHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 1112346789999999999999999999988
No 310
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.2e-32 Score=307.98 Aligned_cols=253 Identities=23% Similarity=0.284 Sum_probs=197.9
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
+|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+++++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 6888999999999999999865 67899999987543 2233567899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+++++|.+++.. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.++.....
T Consensus 82 ~~~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 82 YVEGGDCATLLKN----IGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 9999999999864 34588999999999999999999986 9999999999999999999999999998642110
Q ss_pred CC--------------eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHh
Q 001561 928 DT--------------HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQM 993 (1052)
Q Consensus 928 ~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~ 993 (1052)
.. .......|+..|+|||.+....++.++|+||||+++|||++|+.||... ...+.... .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~---~~~~~~~~---~ 228 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD---TPEELFGQ---V 228 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---CHHHHHHH---H
Confidence 00 0111246788999999988888999999999999999999999999632 11121111 1
Q ss_pred hhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 994 KSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
.... ...+.. ....+.++.+++.+|++.+|++||++.++.+.|+
T Consensus 229 ~~~~----~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 229 ISDD----IEWPEG----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred Hhcc----cCCCCc----cccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 1110 000000 0112346889999999999999999766655554
No 311
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=8.3e-33 Score=305.94 Aligned_cols=260 Identities=24% Similarity=0.322 Sum_probs=196.6
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|+..+.||.|++|.||+|+.. ++..||+|++.... ......+..|++++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999865 68999999887443 22335688999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+. ++|.+++... ....+++..+..++.|+++|++|||+. +++||||+|+||++++++.+|++|||.+.......
T Consensus 81 ~~-~~l~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 81 LH-QDLKKFMDAS--PLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred cc-cCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 96 5788887653 245689999999999999999999986 99999999999999999999999999997654322
Q ss_pred CeeeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccc--------
Q 001561 929 THVTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKRE-------- 999 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------- 999 (1052)
. ......+++.|+|||+..+. .++.++||||||+++|||+||+.||.... +.....+. .........
T Consensus 155 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~ 230 (284)
T cd07860 155 R-TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS--EIDQLFRI-FRTLGTPDEVVWPGVTS 230 (284)
T ss_pred c-ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHH-HHHhCCCChhhhhhhhH
Confidence 1 12234578899999977654 46889999999999999999999996321 11111111 111100000
Q ss_pred --------cccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1000 --------VEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1000 --------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
....... ..........++.+++.+|++.||++||+++|+++
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 231 LPDYKPSFPKWARQD-FSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHhhcccccccC-HHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000000 00001112346789999999999999999999975
No 312
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.5e-32 Score=307.33 Aligned_cols=245 Identities=27% Similarity=0.389 Sum_probs=194.8
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
+.|+..+.||+|+||+||+|... +++.||+|++.... ....+++.+|+++++.++||||+++++++.+++..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888899999999999999865 68999999886432 233456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||++ |++.+++... ...+++..+..++.|++.|+.|||+. +|+||||+|+||++++++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~---~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 95 EYCL-GSASDILEVH---KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HhhC-CCHHHHHHHc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 9997 5666666432 34589999999999999999999986 999999999999999999999999999876543
Q ss_pred CCCeeeecccccccccCccccC---CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQ---TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEII 1003 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
. ....+++.|+|||++. ...++.++||||||+++|||++|+.||.... .... ........ ...
T Consensus 168 ~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~---~~~~---~~~~~~~~-~~~-- 233 (307)
T cd06607 168 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN---AMSA---LYHIAQND-SPT-- 233 (307)
T ss_pred C-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc---HHHH---HHHHhcCC-CCC--
Confidence 2 2346788999999864 4568889999999999999999999985321 1111 11111110 000
Q ss_pred cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1004 DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.....+...+.+++.+|++.+|++||++.+++.
T Consensus 234 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 234 ------LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred ------CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 011224457899999999999999999999987
No 313
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2e-32 Score=303.69 Aligned_cols=244 Identities=24% Similarity=0.307 Sum_probs=199.3
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888999999999999999865 68999999986432 233456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||+|+||++++++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 81 EYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 99999999999875 35689999999999999999999986 999999999999999999999999999987643
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
. .....|++.|+|||.+.+...+.++||||||+++|+|++|+.||.... .......+. ... ..
T Consensus 154 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~---~~~--~~----- 216 (290)
T cd05580 154 R----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN---PIQIYEKIL---EGK--VR----- 216 (290)
T ss_pred C----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHh---cCC--cc-----
Confidence 3 234578999999999888888999999999999999999999996322 111111111 100 00
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRP-----FIEEVVT 1042 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1042 (1052)
.+......+.+++.+|+..+|.+|| +++|+++
T Consensus 217 ----~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 217 ----FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ----CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 0111134788999999999999999 7777764
No 314
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4.2e-32 Score=294.27 Aligned_cols=249 Identities=28% Similarity=0.472 Sum_probs=204.5
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEecc
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
+|+..+.||+|++|.||+|... ++..+++|++........+.+.+|++++++++|++++++++++..+...++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4778899999999999999876 688999999987655556789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+++|.+++... ...+++..+..++.|+++|++|||+. +++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 81 GGSLKDLLKST---NQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred CCcHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 99999988753 25689999999999999999999986 999999999999999999999999999987654332
Q ss_pred eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccch
Q 001561 931 VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHK 1010 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
.....++..|+|||.+....++.++||||||+++|+|++|+.||.... . .+....... .........
T Consensus 154 -~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~---~~~~~~~~~-~~~~~~~~~----- 220 (253)
T cd05122 154 -RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELP---P---MKALFKIAT-NGPPGLRNP----- 220 (253)
T ss_pred -ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCc---h---HHHHHHHHh-cCCCCcCcc-----
Confidence 234568889999999988889999999999999999999999986321 1 111111111 111111111
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1011 DREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1011 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
......+.+++.+|++.||++||++.|+++
T Consensus 221 --~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 221 --EKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred --cccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 112347899999999999999999999875
No 315
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.6e-32 Score=302.39 Aligned_cols=246 Identities=24% Similarity=0.364 Sum_probs=199.2
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
-|+..+.||+|+||.||+|... ++..||+|.+.... ......+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 3677889999999999999864 68899999876433 334467889999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++++|.+++.. ..+++..+..++.+++.|++|||+. +++|+||||+||+++.++.++++|||++.......
T Consensus 85 ~~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06641 85 GGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred CCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch-
Confidence 99999998863 3578999999999999999999985 99999999999999999999999999987654322
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
.......++..|+|||...+..++.++|||||||++|+|++|..||.... ...... ....... .
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~---~~~~~~---~~~~~~~----------~ 219 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH---PMKVLF---LIPKNNP----------P 219 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc---hHHHHH---HHhcCCC----------C
Confidence 11223468889999999988888999999999999999999999986321 111111 1111100 0
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
........++.+++.+|++.+|.+||++.++++
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 220 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred CCCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 011123346889999999999999999999998
No 316
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.2e-32 Score=302.51 Aligned_cols=248 Identities=22% Similarity=0.333 Sum_probs=199.9
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEecc
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
.|...+.||+|++|.||+|... ++..||+|++........+.+.+|+.++++++||||+++++++..++..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 3555678999999999999864 788999999875555555678899999999999999999999999999999999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+........
T Consensus 100 ~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~- 170 (285)
T cd06648 100 GGALTDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP- 170 (285)
T ss_pred CCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-
Confidence 9999998864 3578999999999999999999986 999999999999999999999999999876543222
Q ss_pred eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccch
Q 001561 931 VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHK 1010 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
......|++.|+|||...+..++.++||||||+++|||++|+.||.... ..... ...... ......
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~---~~~~~---~~~~~~-~~~~~~------- 236 (285)
T cd06648 171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP---PLQAM---KRIRDN-LPPKLK------- 236 (285)
T ss_pred ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC---HHHHH---HHHHhc-CCCCCc-------
Confidence 2233568999999999988889999999999999999999999985321 11111 111111 000000
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1011 DREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1011 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
........+.+++.+|++.+|++||++.++++
T Consensus 237 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 237 NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 01112347899999999999999999999986
No 317
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.1e-32 Score=306.86 Aligned_cols=264 Identities=21% Similarity=0.256 Sum_probs=196.1
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch--hhHHHHHHHHHHHHhcC-CCceeeeeceEeeCCe-----
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG--QMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGND----- 841 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 841 (1052)
++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888999999999999999865 689999998765432 23356788999999995 6999999999887665
Q ss_pred EEEEEEeccCCChhhhhhcccCC-ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC-CCCeEEeecc
Q 001561 842 RLLIYSYMENGSLDYWLHESVDK-DSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE-KFEAHLADFG 919 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~-~~~~kl~DfG 919 (1052)
.|+||||+++ ++.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999986 788887654322 45689999999999999999999986 9999999999999998 8999999999
Q ss_pred cccccCCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc
Q 001561 920 LSRLLRPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 920 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
.++.+..... ......+++.|+|||++.+ ..++.++||||||+++|+|++|+.||.... .......+........
T Consensus 157 ~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~---~~~~~~~~~~~~~~~~ 232 (295)
T cd07837 157 LGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDS---ELQQLLHIFKLLGTPT 232 (295)
T ss_pred cceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHHHhCCCC
Confidence 9986543211 1222357889999997754 457899999999999999999999996422 1111111111110000
Q ss_pred cc---cc---cc----cccc----chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 999 EV---EI---ID----ASIW----HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 999 ~~---~~---~~----~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.. .. .+ +... ....+....++.+++.+|++++|.+||++.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 233 EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 00 00 0000 0001123457889999999999999999999875
No 318
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.9e-32 Score=303.06 Aligned_cols=262 Identities=23% Similarity=0.334 Sum_probs=199.3
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch-hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG-QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
+|+..+.||+|++|.||+|+.. +|..||+|++..... .....+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788999999999999999875 688999999875432 23456778999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++ ++.+++.... ....+++..+..++.|+++|++|||+. +++||||||+||++++++.++++|||.+........
T Consensus 81 ~~-~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 81 DK-DLKKYMDTHG-VRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred Cc-cHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 85 7888876533 234689999999999999999999986 999999999999999999999999999976543211
Q ss_pred eeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccc---------
Q 001561 930 HVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKRE--------- 999 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~--------- 999 (1052)
......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||.... ..+....+.........
T Consensus 156 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07836 156 -TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTN---NEDQLLKIFRIMGTPTESTWPGISQL 231 (284)
T ss_pred -ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---cHHHHHHHHHHhCCCChhhHHHHhcC
Confidence 1223467889999998755 457889999999999999999999996432 12222211111100000
Q ss_pred ccccc--c----cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1000 VEIID--A----SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1000 ~~~~~--~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..... + .......+.....+.+++.+|++.||.+||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 232 PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 0 0001111223457889999999999999999999875
No 319
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=9.8e-33 Score=300.76 Aligned_cols=247 Identities=25% Similarity=0.314 Sum_probs=200.9
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
+|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788999999999999999876 68999999987543 2345678999999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+++++|.+++... ..+++..+..++.|+++|++|||+. +++|+||+|+||++++++.++++|||.+......
T Consensus 81 ~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 81 LLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 99999999988642 4688999999999999999999986 9999999999999999999999999999875432
Q ss_pred CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASI 1007 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
. ......|+..|+|||...+..++.++|+||+|+++|+|++|+.||........... ...... . ..
T Consensus 154 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~~~-~-~~------ 219 (258)
T cd05578 154 T--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI----RAKQET-A-DV------ 219 (258)
T ss_pred c--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH----HHHhcc-c-cc------
Confidence 2 22345688899999999888899999999999999999999999975432211111 111110 0 00
Q ss_pred cchhhHHHHHHHHHHHHHcccCCCCCCCCH--HHHH
Q 001561 1008 WHKDREKQLLEMLEIACKCIDQDPRRRPFI--EEVV 1041 (1052)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl 1041 (1052)
..+......+.+++.+|++.||.+||++ +|++
T Consensus 220 --~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 220 --LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred --cCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 1111223578899999999999999999 6554
No 320
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2e-32 Score=304.39 Aligned_cols=261 Identities=23% Similarity=0.291 Sum_probs=197.5
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC--CeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG--NDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 845 (1052)
++|+..+.||+|+||.||+|... +++.+|+|.++... ......+.+|++++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888999999999999999876 68899999987443 22234567899999999999999999998877 889999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+++ +|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+....
T Consensus 85 ~e~~~~-~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 85 MEYVEH-DLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred ehhcCc-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 999974 888887653 23689999999999999999999986 99999999999999999999999999998765
Q ss_pred CCCCeeeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhc--------
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSE-------- 996 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~-------- 996 (1052)
.... ......+++.|+|||.+.+. .++.++|+||+|+++|||++|++||..... .+....+......
T Consensus 158 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~---~~~~~~~~~~~~~~~~~~~~~ 233 (293)
T cd07843 158 SPLK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE---IDQLNKIFKLLGTPTEKIWPG 233 (293)
T ss_pred CCcc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHhCCCchHHHHH
Confidence 4321 22334678899999987654 468899999999999999999999974321 1111111111000
Q ss_pred ---------ccccccccccccchhhHH-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 997 ---------KREVEIIDASIWHKDREK-QLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 997 ---------~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...............+.. ....+.+++.+|++.+|++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 234 FSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000000111111 2456889999999999999999999975
No 321
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.1e-32 Score=308.79 Aligned_cols=262 Identities=27% Similarity=0.329 Sum_probs=197.2
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch--hhHHHHHHHHHHHHhcCCCceeeeeceEeeC--CeEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG--QMEREFQAEVEALSRAQHKNLVSLQGYCRHG--NDRLL 844 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 844 (1052)
.++|++.+.||+|+||.||+|... +|+.||+|+++.... .....+.+|++++++++|+||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 457999999999999999999865 689999999864332 2223466899999999999999999998755 56899
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
||||+++ +|.+++... ...+++.++..++.|+++|++|||+. +++||||||+||++++++.+||+|||.+...
T Consensus 86 v~e~~~~-~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 86 VMEYCEQ-DLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEecCCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 9999975 788877643 25689999999999999999999996 9999999999999999999999999999876
Q ss_pred CCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc---
Q 001561 925 RPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV--- 1000 (1052)
Q Consensus 925 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--- 1000 (1052)
.... .......+++.|+|||.+.+ ..++.++||||+|+++|||++|++||.... ..+....+..........
T Consensus 159 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~---~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07845 159 GLPA-KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS---EIEQLDLIIQLLGTPNESIWP 234 (309)
T ss_pred CCcc-CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHhcCCCChhhch
Confidence 5432 12223356788999998765 567899999999999999999999996432 222222222211110000
Q ss_pred ---------cc-ccccccch---hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1001 ---------EI-IDASIWHK---DREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1001 ---------~~-~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.. ........ ........+.+++.+|++.||++||++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 235 GFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00 00000000 00112456789999999999999999999987
No 322
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.4e-32 Score=301.37 Aligned_cols=256 Identities=26% Similarity=0.406 Sum_probs=205.8
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
..+.|+..+.||+|++|.||+|... ++..||+|++..... ..+.+.+|++++++++|+|++++++++...+..++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 3456888889999999999999876 688999999976544 45678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 96 ~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 96 YMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred ccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 999999999998632 3689999999999999999999986 9999999999999999999999999998765432
Q ss_pred CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASI 1007 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
.. ......+++.|+|||++.+..++.++|||||||++|+|++|+.||..... .... ...... ......
T Consensus 170 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~---~~~~---~~~~~~-~~~~~~---- 237 (286)
T cd06614 170 KS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP---LRAL---FLITTK-GIPPLK---- 237 (286)
T ss_pred hh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH---HHHH---HHHHhc-CCCCCc----
Confidence 21 22234578899999998888899999999999999999999999853211 1111 111111 111110
Q ss_pred cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhh
Q 001561 1008 WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDG 1046 (1052)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 1046 (1052)
........+.+++.+|++.+|.+||++.++++ ++++
T Consensus 238 ---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 238 ---NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred ---chhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 11113347889999999999999999999986 4444
No 323
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.8e-32 Score=298.27 Aligned_cols=251 Identities=24% Similarity=0.363 Sum_probs=206.7
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch--hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG--QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|++.+.||.|+||.||+|... ++.+||+|++..... ...+++.+|++++++++|||++++++.+..++..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4788899999999999999876 688999999875532 4556789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++++|.+++.........+++..+..++.+++.|++|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 999999999987554457799999999999999999999986 99999999999999999999999999998765432
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.......|++.|+|||......++.++||||+|+++|+|++|+.||.... ..+.... ... .....
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~---~~~~~~~---~~~-~~~~~------- 222 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN---LLELALK---ILK-GQYPP------- 222 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc---HHHHHHH---Hhc-CCCCC-------
Confidence 23334578999999999888889999999999999999999999986321 1111111 111 11101
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+.....++.+++.+|+..+|++||++.|+++
T Consensus 223 --~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 223 --IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 01122346889999999999999999999985
No 324
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3e-32 Score=301.14 Aligned_cols=257 Identities=22% Similarity=0.215 Sum_probs=193.7
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcC-CCceeeeeceEeeC--CeEEEEEE
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQ-HKNLVSLQGYCRHG--NDRLLIYS 847 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 847 (1052)
|++.+.||+|+||.||+|... ++..||+|+++... ........+|+.++.++. |+|++++++++.++ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567889999999999999865 68899999987542 222334467888999885 99999999999887 88999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|++ |++.+++... ...+++.+++.++.|++.||+|||+. +++||||||+||+++. +.+||+|||.++.....
T Consensus 81 ~~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 81 LMD-MNLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred cCC-ccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 997 4777777542 34689999999999999999999986 9999999999999999 99999999999876432
Q ss_pred CCeeeecccccccccCccccC-CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc--------
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQ-TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR-------- 998 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~-------- 998 (1052)
.. .....+++.|+|||.+. +..++.++||||+||++|||++|++||.... ..+.+.+.........
T Consensus 153 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07831 153 PP--YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTN---ELDQIAKIHDVLGTPDAEVLKKFR 227 (282)
T ss_pred CC--cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCC---HHHHHHHHHHHcCCCCHHHHHhhc
Confidence 22 22346788999999654 4567889999999999999999999996422 2222222222111100
Q ss_pred ---cccccccccc----chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 999 ---EVEIIDASIW----HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 999 ---~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
......+... .......+..+.+++.+|++++|++||+++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 228 KSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000000000 0011234568999999999999999999999986
No 325
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.9e-32 Score=302.97 Aligned_cols=260 Identities=23% Similarity=0.303 Sum_probs=195.8
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
|++.+.||.|++|.||+|... +|..||+|++.... ....+.+.+|++++++++|||++++++++.+++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567889999999999999865 79999999987543 223356788999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
+ ++|.+++.... ...+++..+..++.|+++||+|||+. +++||||+|+||++++++.++++|||.+........
T Consensus 81 ~-~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 81 D-LDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred C-cCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 5 68988886532 24689999999999999999999986 999999999999999999999999999976543221
Q ss_pred eeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccc---------
Q 001561 930 HVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKRE--------- 999 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~--------- 999 (1052)
......+++.|+|||++.+ ..++.++||||||+++|+|++|++||.... ..+....+.........
T Consensus 155 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07835 155 -TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDS---EIDQLFRIFRTLGTPDEDVWPGVTSL 230 (283)
T ss_pred -ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHHhCCCChHHhhhhhhc
Confidence 1222356889999997755 457889999999999999999999996421 11111111111000000
Q ss_pred cc----ccc--ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1000 VE----IID--ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1000 ~~----~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+ ... ..............+.+++.+|++++|++||+++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 231 PDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00 000 00000111122357889999999999999999999975
No 326
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.8e-32 Score=306.26 Aligned_cols=264 Identities=27% Similarity=0.348 Sum_probs=197.9
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCC-----
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGN----- 840 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 840 (1052)
..++|++.+.||+|+||.||+|... +|+.||+|+++... ......+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4567999999999999999999876 68899999987543 223346778999999999999999999987654
Q ss_pred -----eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEE
Q 001561 841 -----DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHL 915 (1052)
Q Consensus 841 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl 915 (1052)
..++|+||+++ ++...+... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEe
Confidence 78999999986 666666542 34689999999999999999999986 9999999999999999999999
Q ss_pred eecccccccCCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhh
Q 001561 916 ADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMK 994 (1052)
Q Consensus 916 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~ 994 (1052)
+|||.+...............+++.|+|||.+.+ ..++.++|||||||++|||++|++||.... ..+....+....
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~---~~~~~~~~~~~~ 234 (302)
T cd07864 158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ---ELAQLELISRLC 234 (302)
T ss_pred CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHh
Confidence 9999998765433222233456788999997754 457889999999999999999999996322 222222222211
Q ss_pred hccccc---ccc--------cccc-----cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 995 SEKREV---EII--------DASI-----WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 995 ~~~~~~---~~~--------~~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...... .+. +... ........+..+.+++.+|++.+|.+||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 235 GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111000 000 0000 00001112457899999999999999999999875
No 327
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=9.5e-33 Score=300.61 Aligned_cols=249 Identities=25% Similarity=0.382 Sum_probs=200.0
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|+..+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++|+||+++++.+.+++..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999876 68899999986532 23345678999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCC-eEEeecccccccCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFE-AHLADFGLSRLLRPY 927 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~-~kl~DfG~a~~~~~~ 927 (1052)
+++++|.+++... ....+++..+..++.|+++|++|||+. +++|+||||+||++++++. +|++|||.+......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 81 CDGGDLMKRINRQ--RGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 9999999998753 234578999999999999999999986 9999999999999998864 699999999876532
Q ss_pred CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASI 1007 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
. .......|++.|+|||+..+..++.++||||||+++|||++|+.||.... ..++........ ....
T Consensus 156 ~-~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~-~~~~----- 222 (257)
T cd08225 156 M-ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN------LHQLVLKICQGY-FAPI----- 222 (257)
T ss_pred c-ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHhccc-CCCC-----
Confidence 2 22233468899999999888889999999999999999999999986321 111222211111 0000
Q ss_pred cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1008 WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
......++.+++.+|++.+|++||++.|+++
T Consensus 223 ----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 223 ----SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred ----CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1122346889999999999999999999986
No 328
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.1e-32 Score=303.08 Aligned_cols=260 Identities=24% Similarity=0.335 Sum_probs=198.8
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC--CeEEEEEE
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG--NDRLLIYS 847 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 847 (1052)
|++.+.||.|++|.||+|... +++.+|+|++.... ......+.+|++++++++|||++++++++.+. +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999876 58899999998653 33345688999999999999999999999887 78999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+++ +|.+++... ...+++..++.++.|+++|++|||+. +++|+||||+||++++++.+|++|||.+......
T Consensus 81 ~~~~-~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMDH-DLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred cccc-cHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 9975 788777642 24689999999999999999999986 9999999999999999999999999999876554
Q ss_pred CCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccc---
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEII--- 1003 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 1003 (1052)
.........++..|+|||.+.+ ..++.++||||||+++|||++|+.||.... ..+....+.............
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGST---ELEQLEKIFELCGSPTDENWPGVS 230 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHhCCCchhhccccc
Confidence 3222334467889999997654 467899999999999999999999996432 122222222211110000000
Q ss_pred --------------cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1004 --------------DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1004 --------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..............++.+++.+|++.+|++||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 231 KLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred cchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000000112557899999999999999999999976
No 329
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=328.63 Aligned_cols=259 Identities=26% Similarity=0.274 Sum_probs=207.5
Q ss_pred HHHHHHhhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEee
Q 001561 763 VSDLLKSTNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRH 838 (1052)
Q Consensus 763 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 838 (1052)
+.++.-..++|++.++||+|+||.|..++++ +++.||.|++.+.. .....-|..|-++|.....+-|++++..|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 4455566789999999999999999999876 68899999987632 2334568889999998899999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeec
Q 001561 839 GNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADF 918 (1052)
Q Consensus 839 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~Df 918 (1052)
....|+|||||+||+|-..+..+ + .+++..++.++..|+-||.-+|+. |+|||||||+|||+|..|++|++||
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~---~-~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADF 219 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKF---D-RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADF 219 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhc---C-CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccc
Confidence 99999999999999999998753 2 799999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCeeeecccccccccCccccC----C-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHh
Q 001561 919 GLSRLLRPYDTHVTTDLVGTLGYIPPEYSQ----T-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQM 993 (1052)
Q Consensus 919 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~ 993 (1052)
|.+..+..+..-.....+|||.|.+||++. + +.|++.+|+||+||++|||+.|..||... .++...-.+
T Consensus 220 GsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad------slveTY~KI 293 (1317)
T KOG0612|consen 220 GSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD------SLVETYGKI 293 (1317)
T ss_pred hhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH------HHHHHHHHH
Confidence 999988876665666779999999999764 2 57889999999999999999999999631 122111111
Q ss_pred hhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 001561 994 KSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPF---IEEVVT 1042 (1052)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 1042 (1052)
........+ +.....++++.++|.+.+. +|+.|-. +.++-.
T Consensus 294 m~hk~~l~F-------P~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 294 MNHKESLSF-------PDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred hchhhhcCC-------CcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 111111111 1122356688899988776 6677776 666654
No 330
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.4e-32 Score=299.04 Aligned_cols=249 Identities=24% Similarity=0.357 Sum_probs=204.0
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|++.+.||+|+||.||+|... +++.+|+|++.... .....++.+|++++++++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4788899999999999999755 78899999987542 23345678899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++++|.+++.........+++..++.++.|+++|++|||+. +++||||+|+||++++++.+|++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 999999999876544456789999999999999999999986 9999999999999999999999999999876543
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
......+++.|+|||...+..++.++|+||+|+++|||++|+.||.... ........ .....
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~---~~~~~~~~----~~~~~--------- 218 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS---MQDLRYKV----QRGKY--------- 218 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHH----hcCCC---------
Confidence 2223468889999999988889999999999999999999999996422 11111111 11111
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.........++.+++.+|++.+|++||++.|+++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1111234457899999999999999999999975
No 331
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=9e-33 Score=313.18 Aligned_cols=266 Identities=26% Similarity=0.403 Sum_probs=197.5
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC-----CeE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG-----NDR 842 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 842 (1052)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.++++++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999864 78999999986432 23445678899999999999999999987654 357
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
++|+||+++ ++.+++. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~-~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 84 YIVQELMET-DLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEEehhccc-CHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccccee
Confidence 999999975 7776664 34589999999999999999999986 99999999999999999999999999998
Q ss_pred ccCCCCCe--eeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccc
Q 001561 923 LLRPYDTH--VTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKRE 999 (1052)
Q Consensus 923 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
........ ......|++.|+|||.+.+ ..++.++||||+||++|+|++|+.||.... .......+.........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~---~~~~~~~~~~~~~~~~~ 231 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKD---YLHQLNLILGVLGTPSQ 231 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHHcCCCCH
Confidence 75432211 1223578999999997644 568899999999999999999999996321 11111111111111000
Q ss_pred c---cccc-------------ccc-cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 1000 V---EIID-------------ASI-WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 1000 ~---~~~~-------------~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
. .+.+ ... .....+....++.+++.+|++.+|++||++.|+++ +++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~ 298 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY 298 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence 0 0000 000 00001123457889999999999999999999987 45443
No 332
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.6e-32 Score=304.37 Aligned_cols=255 Identities=27% Similarity=0.376 Sum_probs=194.6
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcC-CCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|+..+.||+|+||.||++... +++.||+|++.... ......+.+|+.++.++. ||||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4555678999999999999865 68999999987543 344567889999999996 99999999999999999999999
Q ss_pred ccCCChhhhhhcc-cCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 849 MENGSLDYWLHES-VDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 849 ~~~g~L~~~l~~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
++. ++.++.... ......+++..+..++.+++.|++|||+. .+|+||||||+||+++.++.++|+|||+++.....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 864 554433211 11235689999999999999999999973 48999999999999999999999999999765432
Q ss_pred CCeeeecccccccccCccccCCc---CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTL---TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
.. .....|++.|+|||++.+. .++.++||||+|+++|||++|+.||.... .....+........
T Consensus 162 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~~~------ 228 (288)
T cd06616 162 IA--KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVKGDP------ 228 (288)
T ss_pred Cc--cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcCCCC------
Confidence 21 1233688999999988765 68899999999999999999999996422 11111111111100
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+..........+.++.+++.+|++.+|++||++.|+++
T Consensus 229 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 229 PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111111224457899999999999999999999987
No 333
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-33 Score=276.35 Aligned_cols=249 Identities=25% Similarity=0.412 Sum_probs=195.7
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcC-CCceeeeeceEeeCCeEEEEEEec
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.+....||.|..|.||+++.+ +|...|||.+.... .+..+++.+.++++.+-+ .|.||+.+|||..+...++.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 344667999999999999866 68999999987654 344467788888877765 899999999999999999999998
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
.. .++..+.. ...++++..+-++...++.||.||.+- .+|+|||+||+|||+|+.|.+|+||||.+.++-+...
T Consensus 174 s~-C~ekLlkr---ik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA 247 (391)
T KOG0983|consen 174 ST-CAEKLLKR---IKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA 247 (391)
T ss_pred HH-HHHHHHHH---hcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeecccc
Confidence 54 45666654 245688888999999999999999763 5899999999999999999999999999988754332
Q ss_pred eeeecccccccccCccccCC---cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQT---LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.+..+|-+.|||||.+.. ..|+.++||||||+.++|+.||+.||..+. .+.+....+.. .++ ...+..
T Consensus 248 --htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~--tdFe~ltkvln---~eP--P~L~~~ 318 (391)
T KOG0983|consen 248 --HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK--TDFEVLTKVLN---EEP--PLLPGH 318 (391)
T ss_pred --cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC--ccHHHHHHHHh---cCC--CCCCcc
Confidence 344579999999997754 468889999999999999999999998643 23333433332 111 111111
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...+..+.+++..|+.+|+.+||...++++
T Consensus 319 ------~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 319 ------MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred ------cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 113447899999999999999999998875
No 334
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.2e-33 Score=306.47 Aligned_cols=248 Identities=24% Similarity=0.328 Sum_probs=204.2
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchh--hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQ--MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
..+.|.+.+.||+|.|++|..|++. ++..||+|.+++.... ....+.+|+++|..++|||||+++.+.......|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 3467889999999999999999865 7999999999876532 223488999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+.+|.+++++... +...+..+..++.|+.+|++|||+. .|+|||||++||+++++..+||+|||++.++.
T Consensus 134 ~eya~~ge~~~yl~~~----gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKH----GRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EEeccCchhHHHHHhc----ccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec
Confidence 9999999999999853 3455588899999999999999985 99999999999999999999999999999886
Q ss_pred CCCCeeeecccccccccCccccCCcCC-CcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQTLTA-TCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
. .......+|++.|.|||++.+..| .+++|+||+|+++|-|+.|..||++..-.+-++ .++-
T Consensus 207 ~--~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~---------------rvl~ 269 (596)
T KOG0586|consen 207 Y--GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRP---------------RVLR 269 (596)
T ss_pred c--cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccc---------------hhee
Confidence 3 344556899999999999998776 478999999999999999999998532111100 1111
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
....-++. ...+..+++++++..+|.+|++++++.+
T Consensus 270 gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 270 GKYRIPFY--MSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred eeecccce--eechhHHHHHHhhccCccccCCHHHhhh
Confidence 11111111 1225679999999999999999999986
No 335
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5.5e-32 Score=308.87 Aligned_cols=259 Identities=21% Similarity=0.282 Sum_probs=196.5
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC------
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG------ 839 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 839 (1052)
..++|+..+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 3568999999999999999999865 78999999986432 33345677899999999999999999988643
Q ss_pred CeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecc
Q 001561 840 NDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFG 919 (1052)
Q Consensus 840 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG 919 (1052)
...++||||+++ +|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQM------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 357999999964 77776643 178889999999999999999986 99999999999999999999999999
Q ss_pred cccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhh----
Q 001561 920 LSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKS---- 995 (1052)
Q Consensus 920 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~---- 995 (1052)
.++...... ......+++.|+|||.+.+..++.++|||||||++|+|++|+.||..... .+....+.....
T Consensus 164 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~---~~~~~~~~~~~~~~~~ 238 (353)
T cd07850 164 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH---IDQWNKIIEQLGTPSD 238 (353)
T ss_pred cceeCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH---HHHHHHHHHhcCCCCH
Confidence 998754321 22345688999999999988999999999999999999999999964221 111111110000
Q ss_pred ---------------ccc------cccccccccc----chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 996 ---------------EKR------EVEIIDASIW----HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 996 ---------------~~~------~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
... .......... .........++.+++.+|++.||++||++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 239 EFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000 0000000000 0001123456889999999999999999999987
No 336
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=7e-33 Score=280.11 Aligned_cols=268 Identities=25% Similarity=0.304 Sum_probs=201.5
Q ss_pred cCCcccCeEcccCceEEEEEEECC-----CcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEee-CCeE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTN-----GTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRH-GNDR 842 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 842 (1052)
..|+.+..||+|.||.||+|...+ ...+|+|+++.+. ........+|+..++.++|||++.+..++.. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 468999999999999999996432 2368999997552 1223446889999999999999999998877 7788
Q ss_pred EEEEEeccCCChhhhhhcccC-CccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCC----CCeEEee
Q 001561 843 LLIYSYMENGSLDYWLHESVD-KDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEK----FEAHLAD 917 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~----~~~kl~D 917 (1052)
++++||++. +|.+.++.++. ....++...+..|+.||+.|+.|||+. -|+|||+||.|||+..+ |.|||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeec
Confidence 999999987 67777765443 345789999999999999999999996 89999999999999877 9999999
Q ss_pred cccccccCCCCCe--eeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccC----CC--CchhHHH
Q 001561 918 FGLSRLLRPYDTH--VTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCK----GK--NCRDLVS 988 (1052)
Q Consensus 918 fG~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~----~~--~~~~~~~ 988 (1052)
||+|+.+...-.. ....++-|..|+|||.+.+ ..||++.||||.|||+.||+|-++-|.+.. .. -..+.+.
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 9999987644222 2345678999999997665 568999999999999999999888885432 11 1123444
Q ss_pred HHHHhhhcccccccccccccchh-------h-----H----H-------HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 989 WVFQMKSEKREVEIIDASIWHKD-------R-----E----K-------QLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~-------~-----~----~-------~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.++...+.....+..+-.-..++ + . . ......+++.+++..||.+|.|+.++++
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence 45544433332222221111111 0 0 0 0123679999999999999999999987
No 337
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-34 Score=338.60 Aligned_cols=251 Identities=29% Similarity=0.399 Sum_probs=202.4
Q ss_pred hcCCcccCeEcccCceEEEEEE-ECCCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKAT-LTNGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
+-+++....||.|.||.||.|. ..+|+-.|+|.+.... ....+.+.+|+.++..++|||+|+++|+-.+.+..+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 3467778899999999999998 4579999999876543 233456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
|||++|+|.+.++. ++..++.....+..|++.|++|||++ |||||||||+||+++.+|.+|.+|||.|..+..
T Consensus 1314 EyC~~GsLa~ll~~----gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEH----GRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHhccCcHHHHHHh----cchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecC
Confidence 99999999999874 55567778888999999999999998 999999999999999999999999999998765
Q ss_pred CCCe---eeecccccccccCccccCC---cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 927 YDTH---VTTDLVGTLGYIPPEYSQT---LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 927 ~~~~---~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
.... ......||+.|||||++.+ .....++||||+|||+.||+||+.||... +.-++-++... .+..
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~-----dne~aIMy~V~-~gh~- 1459 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAEL-----DNEWAIMYHVA-AGHK- 1459 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhc-----cchhHHHhHHh-ccCC-
Confidence 4211 1134689999999998765 34567899999999999999999999632 12222222211 1111
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+.++..+.+-.+++.+|++.||++|.++.|+++
T Consensus 1460 --------Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1460 --------PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred --------CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 1223335557789999999999999999988876
No 338
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.5e-32 Score=311.14 Aligned_cols=269 Identities=25% Similarity=0.373 Sum_probs=201.4
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEee----CCeE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRH----GNDR 842 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 842 (1052)
.++|++.+.||+|+||.||+|... +|..||+|++.... ......+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367999999999999999999865 68999999987543 2334567789999999999999999998763 3467
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
++||||+. |+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 84 ~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 84 YVVMDLME-SDLHHIIHS----DQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEehhh-hhHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 99999996 588888763 34589999999999999999999986 99999999999999999999999999997
Q ss_pred ccCCCCCe---eeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc
Q 001561 923 LLRPYDTH---VTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 923 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
........ ......|+..|+|||.+.. ..++.++||||||+++|||++|+.||..... ......+........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~---~~~~~~~~~~~g~~~ 232 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY---VHQLKLILSVLGSPS 232 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh---HHHHHHHHHHhCCCh
Confidence 65432211 1223578999999998755 5688999999999999999999999964321 111111111110000
Q ss_pred -----------cccc---cc---ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcCc
Q 001561 999 -----------EVEI---ID---ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIGI 1049 (1052)
Q Consensus 999 -----------~~~~---~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~~ 1049 (1052)
.... .. ...+.........++.+++.+|++.+|++||+++++++ ++++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~ 302 (334)
T cd07855 233 EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHD 302 (334)
T ss_pred hHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccC
Confidence 0000 00 00001111223567899999999999999999999987 6655443
No 339
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=5e-32 Score=304.44 Aligned_cols=245 Identities=27% Similarity=0.401 Sum_probs=193.9
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
|+..+.||+|+||.||+|+.. ++..||+|++.... .....++..|++++++++|||++++++++.+++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 667888999999999999865 68899999986432 23345688899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++ ++.+.+.. ....+++..+..++.+++.|+.|||+. +|+||||+|+||+++.++.++|+|||++......
T Consensus 107 ~~g-~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (317)
T cd06635 107 CLG-SASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA- 178 (317)
T ss_pred CCC-CHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence 975 77776653 244589999999999999999999986 9999999999999999999999999998754322
Q ss_pred CeeeecccccccccCccccC---CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQ---TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
....|++.|+|||++. ...++.++|||||||++|||++|+.||.... ..... ........ .
T Consensus 179 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~---~~~~~---~~~~~~~~-~----- 242 (317)
T cd06635 179 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN---AMSAL---YHIAQNES-P----- 242 (317)
T ss_pred ----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc---HHHHH---HHHHhccC-C-----
Confidence 2346888999999863 4568899999999999999999999986321 11111 11111110 0
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWL 1044 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1044 (1052)
..........+.+++.+|++.+|.+||++.++++..
T Consensus 243 ---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 243 ---TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred ---CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 001112334688999999999999999999999843
No 340
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1e-31 Score=294.05 Aligned_cols=251 Identities=22% Similarity=0.253 Sum_probs=192.9
Q ss_pred cHHHHHHhhcCCcccCeE--cccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhc-CCCceeeeeceEe
Q 001561 762 TVSDLLKSTNNFNQANII--GCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRA-QHKNLVSLQGYCR 837 (1052)
Q Consensus 762 ~~~~~~~~~~~~~~~~~l--G~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 837 (1052)
+..+.....++|++.+.+ |+|+||.||++... ++..+|+|.+....... .|+.....+ +||||+++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~ 79 (267)
T PHA03390 5 SLSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVT 79 (267)
T ss_pred HHHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEe
Confidence 344555556677777776 99999999999864 68889999986432111 122222222 7999999999999
Q ss_pred eCCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCC-CeEEe
Q 001561 838 HGNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKF-EAHLA 916 (1052)
Q Consensus 838 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~-~~kl~ 916 (1052)
.++..++||||+++++|.+++... ..+++.++..++.|+++|++|||+. +++||||||+||+++.++ .++++
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~ 152 (267)
T PHA03390 80 TLKGHVLIMDYIKDGDLFDLLKKE----GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLC 152 (267)
T ss_pred cCCeeEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEe
Confidence 999999999999999999998742 3789999999999999999999986 999999999999999998 99999
Q ss_pred ecccccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhc
Q 001561 917 DFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSE 996 (1052)
Q Consensus 917 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 996 (1052)
|||.++..... ....|+..|+|||++.+..++.++||||+|+++|||++|+.||...... ..+...+.... .
T Consensus 153 dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~- 224 (267)
T PHA03390 153 DYGLCKIIGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-ELDLESLLKRQ-Q- 224 (267)
T ss_pred cCccceecCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-hhhHHHHHHhh-c-
Confidence 99998765432 1246889999999999888999999999999999999999999733221 11111111111 1
Q ss_pred ccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 001561 997 KREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPF-IEEVVT 1042 (1052)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 1042 (1052)
.. .. ........+.+++.+|++.+|.+||+ ++|+++
T Consensus 225 ~~-~~---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 225 KK-LP---------FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred cc-CC---------cccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00 00 01123447899999999999999996 688875
No 341
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=6.5e-32 Score=300.39 Aligned_cols=267 Identities=23% Similarity=0.308 Sum_probs=197.8
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
++|++.+.||+|++|+||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46889999999999999999875 78899999886442 2233567889999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC-CCCeEEeecccccccCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE-KFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~-~~~~kl~DfG~a~~~~~ 926 (1052)
|++ +++.+++... ....+++..+..++.|++.||+|||+. +++||||+|+||++++ ++.+||+|||++.....
T Consensus 82 ~~~-~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 82 YLD-LDLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ccc-ccHHHHHHhC--CCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 996 4777776542 233467888899999999999999986 9999999999999985 56799999999976543
Q ss_pred CCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccc----
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVE---- 1001 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---- 1001 (1052)
.. .......+++.|+|||++.+ ..++.++||||+|+++|+|+||++||.... ..+................
T Consensus 156 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 231 (294)
T PLN00009 156 PV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDS---EIDELFKIFRILGTPNEETWPGV 231 (294)
T ss_pred Cc-cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHHhCCCChhhcccc
Confidence 21 11233467889999998765 457889999999999999999999996422 1111111111111100000
Q ss_pred --ccc---------ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 1002 --IID---------ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 1002 --~~~---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
..+ .............++.+++.+|++.+|++||++.++++ ++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence 000 00000001123446889999999999999999999987 55544
No 342
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=4.2e-32 Score=300.13 Aligned_cols=259 Identities=24% Similarity=0.311 Sum_probs=199.9
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch--hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG--QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
|++.+.||+|++|.||+|... +++.+|+|++..... .....+.+|++++++++|+||+++++++.+++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999865 788999999875432 24567888999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
++ ++.+++... ...+++..+..++.|++.|++|||+. +|+|+||||+||++++++.++|+|||.+.......
T Consensus 81 ~~-~l~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~- 152 (283)
T cd05118 81 DT-DLYKLIKDR---QRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV- 152 (283)
T ss_pred CC-CHHHHHHhh---cccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-
Confidence 75 787777652 35689999999999999999999986 99999999999999999999999999998765433
Q ss_pred eeeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcc---cc------
Q 001561 930 HVTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEK---RE------ 999 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~---~~------ 999 (1052)
.......++..|+|||...+. .++.++||||+|+++|+|++|+.||.... ..+............ ..
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKS---EIDQLFKIFRTLGTPDPEVWPKFTSL 229 (283)
T ss_pred ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHHcCCCchHhcccchhh
Confidence 122334678899999987766 78999999999999999999999996422 111111111110000 00
Q ss_pred -----cccccc--cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1000 -----VEIIDA--SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1000 -----~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...... ............++.+++.+|+++||.+||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 230 ARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000000 0001112234568899999999999999999999975
No 343
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=5.8e-32 Score=298.01 Aligned_cols=241 Identities=27% Similarity=0.330 Sum_probs=186.2
Q ss_pred eEcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHHHHHh---cCCCceeeeeceEeeCCeEEEEEEecc
Q 001561 778 IIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVEALSR---AQHKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 778 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~---l~h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
+||+|+||.||+|... +++.||+|.+..... .....+.+|..+++. .+||+|+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999865 688999998865321 222334445444443 479999999999999999999999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+|+|.+++.. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++++|||++.......
T Consensus 81 ~~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 81 GGDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 9999988864 34589999999999999999999986 99999999999999999999999999997654321
Q ss_pred eeecccccccccCccccC-CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 931 VTTDLVGTLGYIPPEYSQ-TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
.....|++.|+|||... +..++.++||||+||++|||++|+.||.......... ..... . .. ..
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~---~-~~-----~~---- 216 (279)
T cd05633 152 -PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMT---L-TV-----NV---- 216 (279)
T ss_pred -ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HHHHh---h-cC-----Cc----
Confidence 12346899999999876 4568899999999999999999999996433222111 11110 0 00 00
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRP-----FIEEVVT 1042 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1042 (1052)
..+.....++.+++.+|++.||++|| +++|+++
T Consensus 217 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 217 ELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred CCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 11122345788999999999999999 5999987
No 344
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.4e-33 Score=326.61 Aligned_cols=252 Identities=27% Similarity=0.415 Sum_probs=186.4
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC--------
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG-------- 839 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 839 (1052)
..+|+..++||+||||.|||++.+ ||..||||++.... ......+.+|+..+++++|||||+++..+.+.
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 356888899999999999999977 89999999997553 33345688999999999999999998431000
Q ss_pred --------------------------------------------------------------------------------
Q 001561 840 -------------------------------------------------------------------------------- 839 (1052)
Q Consensus 840 -------------------------------------------------------------------------------- 839 (1052)
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence
Q ss_pred -------------------------------CeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHH
Q 001561 840 -------------------------------NDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLH 888 (1052)
Q Consensus 840 -------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH 888 (1052)
...||-||||+...+.+++++..... .....++++.+|++||+|+|
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~---~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS---QRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch---hhHHHHHHHHHHHHHHHHHH
Confidence 11367788888887777776532111 45788999999999999999
Q ss_pred hcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC-----------------CCCeeeecccccccccCccccCCc-
Q 001561 889 KVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP-----------------YDTHVTTDLVGTLGYIPPEYSQTL- 950 (1052)
Q Consensus 889 ~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~-----------------~~~~~~~~~~gt~~y~aPE~~~~~- 950 (1052)
++ +||||||||.||++|+++.|||+|||+|+.... ......+..+||.-|+|||++.+.
T Consensus 715 ~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 97 999999999999999999999999999987210 001122456899999999987665
Q ss_pred --CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHccc
Q 001561 951 --TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCID 1028 (1052)
Q Consensus 951 --~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 1028 (1052)
.|+.|+|+||+|||++||+. ||.. ..+.+..+.... ....... +.++ ......-..+|.+|++
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~T-----sMERa~iL~~LR-~g~iP~~--~~f~----~~~~~~e~slI~~Ll~ 856 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGT-----SMERASILTNLR-KGSIPEP--ADFF----DPEHPEEASLIRWLLS 856 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCc-----hHHHHHHHHhcc-cCCCCCC--cccc----cccchHHHHHHHHHhc
Confidence 49999999999999999995 5642 222222222211 1111111 1111 1122234689999999
Q ss_pred CCCCCCCCHHHHHH
Q 001561 1029 QDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1029 ~dP~~RPs~~evl~ 1042 (1052)
.||.+|||+.|++.
T Consensus 857 hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 857 HDPSKRPTATELLN 870 (1351)
T ss_pred CCCccCCCHHHHhh
Confidence 99999999999986
No 345
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2e-32 Score=310.29 Aligned_cols=265 Identities=23% Similarity=0.325 Sum_probs=199.2
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCC--chhhHHHHHHHHHHHHhcCCCceeeeeceEeeC-----Ce
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGD--CGQMEREFQAEVEALSRAQHKNLVSLQGYCRHG-----ND 841 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 841 (1052)
.++|.+.+.||+|+||+||+|+.. ++..||+|.+... .......+.+|+.++++++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 357899999999999999999865 7899999998753 223345677899999999999999999988654 34
Q ss_pred EEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccc
Q 001561 842 RLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLS 921 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a 921 (1052)
.++|+||+. ++|.+++.. ...+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 799999996 678777753 34689999999999999999999986 9999999999999999999999999999
Q ss_pred cccCCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc--
Q 001561 922 RLLRPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR-- 998 (1052)
Q Consensus 922 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 998 (1052)
....... .......++..|+|||.+.. ..++.++||||||+++|+|++|++||..... ...............
T Consensus 156 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~~~~~~~~~~~~ 231 (337)
T cd07858 156 RTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY---VHQLKLITELLGSPSEE 231 (337)
T ss_pred cccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh---HHHHHHHHHHhCCCChH
Confidence 8764322 22334568889999997654 5688999999999999999999999964221 111111111100000
Q ss_pred -c--------ccc-------ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 999 -E--------VEI-------IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 999 -~--------~~~-------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
. ... ..... .........++.+++.+|++.+|++||+++|+++ +++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 232 DLGFIRNEKARRYIRSLPYTPRQSF-ARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred HhhhcCchhhhHHHHhcCcccccCH-HHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 0 000 00000 0011223457889999999999999999999987 46554
No 346
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.6e-31 Score=291.10 Aligned_cols=250 Identities=30% Similarity=0.431 Sum_probs=203.9
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch--hhHHHHHHHHHHHHhcCCCceeeeeceEeeC--CeEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG--QMEREFQAEVEALSRAQHKNLVSLQGYCRHG--NDRLLIY 846 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 846 (1052)
+|+..+.||+|++|.||+|... ++..|++|++..... ...+.+.+|++++++++||||+++++.+.+. +..++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777899999999999999876 789999999875542 4456789999999999999999999999988 8899999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++++|.+++... ..+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 81 EYVSGGSLSSLLKKF----GKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 999999999998753 2789999999999999999999986 999999999999999999999999999987654
Q ss_pred CCCe-eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 927 YDTH-VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 927 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
.... ......++..|+|||.......+.++||||||+++|+|++|+.||.... +..............
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~------ 222 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-----NPMAALYKIGSSGEP------ 222 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHhccccCCC------
Confidence 3321 1234578899999999988889999999999999999999999996432 111111111110111
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...+......+.+++.+|++.+|.+||++.|+++
T Consensus 223 ---~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 223 ---PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ---cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 1111222457899999999999999999999975
No 347
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=6.4e-32 Score=299.54 Aligned_cols=248 Identities=23% Similarity=0.315 Sum_probs=198.5
Q ss_pred cCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCCh
Q 001561 776 ANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSL 854 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 854 (1052)
..+||+|+||.||+|... +++.||+|++........+.+.+|+.++++++|+|++++++++..++..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 356999999999999864 7899999998755555566789999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeeeec
Q 001561 855 DYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTD 934 (1052)
Q Consensus 855 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 934 (1052)
.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||.+....... .....
T Consensus 105 ~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~ 175 (292)
T cd06657 105 TDIVTH-----TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKS 175 (292)
T ss_pred HHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccc
Confidence 987743 3478899999999999999999986 99999999999999999999999999987654322 12233
Q ss_pred ccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHH
Q 001561 935 LVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREK 1014 (1052)
Q Consensus 935 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1052)
..|++.|+|||...+..++.++||||+|+++|||++|+.||.... ............. .. .. ....
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~---~~~~~~~~~~~~~----~~-----~~--~~~~ 241 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP---PLKAMKMIRDNLP----PK-----LK--NLHK 241 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhhCC----cc-----cC--Cccc
Confidence 568899999999888888999999999999999999999986321 1111111111110 00 00 0011
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhh
Q 001561 1015 QLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDG 1046 (1052)
Q Consensus 1015 ~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 1046 (1052)
....+.+++.+|++.+|.+||++.++++ ++..
T Consensus 242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~ 275 (292)
T cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 275 (292)
T ss_pred CCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhc
Confidence 2336789999999999999999999987 4443
No 348
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.6e-32 Score=308.89 Aligned_cols=268 Identities=25% Similarity=0.345 Sum_probs=206.1
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCC-----eEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGN-----DRL 843 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 843 (1052)
+|++.+.||+|++|.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788999999999999999875 58999999987643 344567899999999999999999999988765 789
Q ss_pred EEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccc
Q 001561 844 LIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRL 923 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~ 923 (1052)
+||||+++ +|.+++.. ...+++..++.++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+..
T Consensus 81 lv~e~~~~-~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELMET-DLHKVIKS----PQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchhh-hHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 99999984 78887764 33789999999999999999999986 999999999999999999999999999987
Q ss_pred cCCCCC--eeeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 924 LRPYDT--HVTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 924 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
...... .......+++.|+|||++.+. .++.++||||+|+++|+|++|++||.... ..+....+..........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~---~~~~~~~i~~~~~~~~~~ 229 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD---YIDQLNLIVEVLGTPSEE 229 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCC---HHHHHHHHHHhcCCCChh
Confidence 654321 123345688899999998877 78999999999999999999999996432 111122111111100000
Q ss_pred -----------cccc------ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcCcc
Q 001561 1001 -----------EIID------ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIGID 1050 (1052)
Q Consensus 1001 -----------~~~~------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~~~ 1050 (1052)
.... ...+..........+.+++.+|++.+|.+||++.++++ +++++...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 230 DLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred HhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 0000 00000011123457889999999999999999999998 67776543
No 349
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1e-31 Score=293.53 Aligned_cols=247 Identities=23% Similarity=0.319 Sum_probs=197.8
Q ss_pred EcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCCh
Q 001561 779 IGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSL 854 (1052)
Q Consensus 779 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 854 (1052)
||+|++|.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999876 58899999987543 23456789999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeeeec
Q 001561 855 DYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTD 934 (1052)
Q Consensus 855 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 934 (1052)
.+++... ..+++..+..++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||.+....... ....
T Consensus 81 ~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~ 151 (262)
T cd05572 81 WTILRDR----GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWT 151 (262)
T ss_pred HHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccc
Confidence 9998752 3488999999999999999999986 99999999999999999999999999998764332 2233
Q ss_pred ccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHH
Q 001561 935 LVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREK 1014 (1052)
Q Consensus 935 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1052)
..|++.|+|||......++.++|+||+|+++|+|++|+.||...... ..+.. ......... ...+..
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~---~~~~~~~~~---------~~~~~~ 218 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED-PMEIY---NDILKGNGK---------LEFPNY 218 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC-HHHHH---HHHhccCCC---------CCCCcc
Confidence 57889999999988888999999999999999999999999643221 11111 111110000 011111
Q ss_pred HHHHHHHHHHHcccCCCCCCCC-----HHHHHH--HHhhc
Q 001561 1015 QLLEMLEIACKCIDQDPRRRPF-----IEEVVT--WLDGI 1047 (1052)
Q Consensus 1015 ~~~~l~~li~~cl~~dP~~RPs-----~~evl~--~L~~i 1047 (1052)
....+.+++.+|++.+|++||+ +.|+++ ++.+.
T Consensus 219 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 219 IDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred cCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 2447899999999999999999 788876 55443
No 350
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.98 E-value=4.1e-32 Score=304.52 Aligned_cols=266 Identities=24% Similarity=0.294 Sum_probs=193.1
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCC------
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGN------ 840 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 840 (1052)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357999999999999999999865 68999999886432 222334678999999999999999999987654
Q ss_pred --eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeec
Q 001561 841 --DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADF 918 (1052)
Q Consensus 841 --~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~Df 918 (1052)
..++||||+++ ++.+++.. ....+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.+||+||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence 34999999965 77777654 234689999999999999999999986 9999999999999999999999999
Q ss_pred ccccccCCCCCe---eeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhh
Q 001561 919 GLSRLLRPYDTH---VTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMK 994 (1052)
Q Consensus 919 G~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~ 994 (1052)
|.+......... ......++..|+|||...+. .++.++||||||+++|||++|++||..............+....
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999876432211 12234678899999977554 47889999999999999999999996432211111111111000
Q ss_pred hccccccc-----cc-----ccccchhh-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 995 SEKREVEI-----ID-----ASIWHKDR-----EKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 995 ~~~~~~~~-----~~-----~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
........ .+ ........ ......+.+++.+|++.||++||+++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 00000000 00 00000000 001235679999999999999999999975
No 351
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.98 E-value=3.5e-32 Score=308.65 Aligned_cols=268 Identities=25% Similarity=0.343 Sum_probs=199.3
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeC--CeE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHG--NDR 842 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~ 842 (1052)
..++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3467888999999999999999865 68899999885432 23334577899999999 999999999998654 367
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
++||||++ ++|..++.. . .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.+.
T Consensus 85 ~lv~e~~~-~~L~~~~~~----~-~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 85 YLVFEYME-TDLHAVIRA----N-ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEecccc-cCHHHHHhc----C-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 99999997 588887754 2 678899999999999999999986 99999999999999999999999999998
Q ss_pred ccCCCCC----eeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcc
Q 001561 923 LLRPYDT----HVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEK 997 (1052)
Q Consensus 923 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
....... .......|++.|+|||++.+ ..++.++||||||+++|+|++|+.||..... .+....+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~---~~~~~~~~~~~~~~ 232 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTST---LNQLEKIIEVIGPP 232 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHhCCC
Confidence 7643322 12234578999999997654 5678899999999999999999999964221 11111111110000
Q ss_pred c-----------cccccc----ccc--cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcC
Q 001561 998 R-----------EVEIID----ASI--WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIG 1048 (1052)
Q Consensus 998 ~-----------~~~~~~----~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~ 1048 (1052)
. .....+ ... ..........++.+++.+|++.+|++||++.++++ +++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~ 302 (337)
T cd07852 233 SAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH 302 (337)
T ss_pred CHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence 0 000000 000 00001113457899999999999999999999997 565553
No 352
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.98 E-value=7.9e-32 Score=294.65 Aligned_cols=249 Identities=24% Similarity=0.361 Sum_probs=196.2
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCC-----chhhHHHHHHHHHHHHhcCCCceeeeeceEeeC--CeE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGD-----CGQMEREFQAEVEALSRAQHKNLVSLQGYCRHG--NDR 842 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 842 (1052)
.+|++.+.||+|+||.||+|... ++..||+|.+... .....+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46889999999999999999865 6899999987532 123345788999999999999999999998764 457
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
++|+||+++++|.+++.. ...+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.++
T Consensus 82 ~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA----YGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEeCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 899999999999998864 23478899999999999999999986 99999999999999999999999999998
Q ss_pred ccCCCC--CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 923 LLRPYD--THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 923 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
...... ........|+..|+|||...+..++.++||||||+++|||++|+.||... +..... .........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~---~~~~~~---~~~~~~~~~- 227 (264)
T cd06653 155 RIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY---EAMAAI---FKIATQPTK- 227 (264)
T ss_pred ccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc---CHHHHH---HHHHcCCCC-
Confidence 654211 11122356899999999998888999999999999999999999999632 111111 111111100
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...+.....++.+++.+|++ +|..||++.+++.
T Consensus 228 --------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 228 --------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred --------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 01122334578999999999 5799999998764
No 353
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.98 E-value=8.4e-32 Score=296.65 Aligned_cols=244 Identities=26% Similarity=0.347 Sum_probs=192.3
Q ss_pred EcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCCh
Q 001561 779 IGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSL 854 (1052)
Q Consensus 779 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 854 (1052)
||+|+||+||+|... +|+.||+|.+.... ......+..|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999754 68999999986432 22234567899999999999999999999999999999999999999
Q ss_pred hhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeeeec
Q 001561 855 DYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTD 934 (1052)
Q Consensus 855 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 934 (1052)
.+++.... ...+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||.+...... .....
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~ 153 (277)
T cd05577 81 KYHIYNVG--EPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIKG 153 (277)
T ss_pred HHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC--Ccccc
Confidence 99987542 24689999999999999999999986 9999999999999999999999999999765432 22233
Q ss_pred ccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHH
Q 001561 935 LVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREK 1014 (1052)
Q Consensus 935 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1052)
..++..|+|||+..+..++.++||||+|+++|+|++|+.||............. ...... . ...+..
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~------~----~~~~~~ 220 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELK---RRTLEM------A----VEYPDK 220 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHH---hccccc------c----ccCCcc
Confidence 467889999999888889999999999999999999999996432211111110 000000 0 001112
Q ss_pred HHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001561 1015 QLLEMLEIACKCIDQDPRRRP-----FIEEVVT 1042 (1052)
Q Consensus 1015 ~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1042 (1052)
....+.+++.+|++.+|++|| ++.++++
T Consensus 221 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 221 FSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 244788999999999999999 6666765
No 354
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.98 E-value=2.2e-31 Score=289.16 Aligned_cols=247 Identities=28% Similarity=0.453 Sum_probs=201.8
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch--hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG--QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|++.+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++|||++++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4788899999999999999865 678999999876543 3456789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+++++|.+++... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 81 AENGSLRQIIKKF----GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCCcHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 9999999988743 5689999999999999999999986 99999999999999999999999999998765433
Q ss_pred CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.. .....++..|+|||...+..++.++||||+|+++|+|++|+.||.... ..... ..... ..... +
T Consensus 154 ~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~---~~~~~---~~~~~-~~~~~-~----- 219 (254)
T cd06627 154 KD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN---PMAAL---FRIVQ-DDHPP-L----- 219 (254)
T ss_pred cc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc---HHHHH---HHHhc-cCCCC-C-----
Confidence 21 233568889999999888788999999999999999999999986321 11111 11111 10000 1
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+......+.+++.+|+..+|++||++.|++.
T Consensus 220 ---~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 220 ---PEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ---CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1122347889999999999999999999874
No 355
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.98 E-value=1.7e-31 Score=301.58 Aligned_cols=264 Identities=22% Similarity=0.286 Sum_probs=194.7
Q ss_pred eEccc--CceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCC
Q 001561 778 IIGCG--GFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENG 852 (1052)
Q Consensus 778 ~lG~G--~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 852 (1052)
.||+| +||+||+|... +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++|+||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 99999999864 79999999987432 333467889999999999999999999999999999999999999
Q ss_pred ChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe--
Q 001561 853 SLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH-- 930 (1052)
Q Consensus 853 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-- 930 (1052)
++.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+.........
T Consensus 85 ~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 85 SANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 9999887643 23588999999999999999999986 9999999999999999999999999865433211110
Q ss_pred ee----ecccccccccCccccCC--cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhh----------
Q 001561 931 VT----TDLVGTLGYIPPEYSQT--LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMK---------- 994 (1052)
Q Consensus 931 ~~----~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~---------- 994 (1052)
.. ....++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ...........
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 237 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT--QMLLQKLKGPPYSPLDITTFP 237 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH--HHHHHHhcCCCCCCccccccc
Confidence 00 01234567999998865 34788999999999999999999999643211 11111000000
Q ss_pred ----------------------hcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcC
Q 001561 995 ----------------------SEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIG 1048 (1052)
Q Consensus 995 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~ 1048 (1052)
.........+..............+.+++.+|++.||++|||++|+++ ++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 238 CEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred hhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 000000011111111223345668899999999999999999999986 666554
No 356
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.98 E-value=1.7e-31 Score=296.67 Aligned_cols=256 Identities=18% Similarity=0.244 Sum_probs=181.9
Q ss_pred hcCCcccCeEcccCceEEEEEEECC----CcEEEEEEecCCchhh--H---------HHHHHHHHHHHhcCCCceeeeec
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTN----GTKAAVKRLSGDCGQM--E---------REFQAEVEALSRAQHKNLVSLQG 834 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~--~---------~~~~~E~~~l~~l~h~niv~l~~ 834 (1052)
.++|++.+.||+|+||+||+|...+ +..+|+|......... + .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3579999999999999999998764 3456666543222111 1 11223344555678999999999
Q ss_pred eEeeCC----eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCC
Q 001561 835 YCRHGN----DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEK 910 (1052)
Q Consensus 835 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~ 910 (1052)
++.... ..++++|++.. ++.+.+.. ....++..+..++.|+++|++|||+. +|+||||||+|||++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKR----IKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGN 162 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHh----hccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC
Confidence 765543 33677776643 45554432 22356788899999999999999986 99999999999999999
Q ss_pred CCeEEeecccccccCCCCCe------eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCch
Q 001561 911 FEAHLADFGLSRLLRPYDTH------VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCR 984 (1052)
Q Consensus 911 ~~~kl~DfG~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~ 984 (1052)
+.++|+|||+|+.+...... ......||+.|+|||+..+..++.++|||||||++|||++|+.||.........
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~ 242 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL 242 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence 99999999999876432211 112346999999999999999999999999999999999999999754221110
Q ss_pred -hH--HHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 985 -DL--VSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 985 -~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
.. .++........ .. .......+.+++..|+..+|++||+++++.+.|+
T Consensus 243 ~~~~~~~~~~~~~~~~---------~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 243 IHAAKCDFIKRLHEGK---------IK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHhHHHHHHHhhhhh---------hc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 00 01111111100 00 0112347889999999999999999999998763
No 357
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.98 E-value=9.7e-32 Score=293.92 Aligned_cols=244 Identities=26% Similarity=0.326 Sum_probs=194.1
Q ss_pred EcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCCh
Q 001561 779 IGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSL 854 (1052)
Q Consensus 779 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 854 (1052)
||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++.+.++...++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999876 589999999875533 3456788999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC-----
Q 001561 855 DYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT----- 929 (1052)
Q Consensus 855 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~----- 929 (1052)
.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||++++++.++++|||++........
T Consensus 81 ~~~l~~~----~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLENV----GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 9998752 3689999999999999999999986 999999999999999999999999999876433211
Q ss_pred --eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccc
Q 001561 930 --HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASI 1007 (1052)
Q Consensus 930 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
.......++..|+|||.......+.++||||||+++||+++|+.||.... .......... ... .. +
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~---~~~~~~~~~~----~~~-~~--~-- 221 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET---PEEIFQNILN----GKI-EW--P-- 221 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhc----CCc-CC--C--
Confidence 12234568889999999888889999999999999999999999996322 1122211111 000 00 0
Q ss_pred cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001561 1008 WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWL 1044 (1052)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1044 (1052)
........+.+++.+|++.+|++||++.++.+.|
T Consensus 222 ---~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 222 ---EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred ---ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 0001235788999999999999999995554443
No 358
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.98 E-value=1.3e-31 Score=297.09 Aligned_cols=255 Identities=24% Similarity=0.301 Sum_probs=198.2
Q ss_pred CCcccCeEcccCceEEEEEEEC----CCcEEEEEEecCCc----hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT----NGTKAAVKRLSGDC----GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDR 842 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 842 (1052)
+|++.+.||+|++|.||+|... +++.||||.++... ....+.+..|++++.++ +||+|+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4778899999999999999743 56889999987432 22335678899999999 599999999999999999
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.++++|||+++
T Consensus 81 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEEecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccc
Confidence 999999999999988864 34588999999999999999999986 99999999999999999999999999988
Q ss_pred ccCCCCCeeeecccccccccCccccCCcC--CCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 923 LLRPYDTHVTTDLVGTLGYIPPEYSQTLT--ATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 923 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
..............|++.|+|||...+.. .+.++||||||+++|||++|+.||....... .............
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~--- 228 (288)
T cd05583 154 EFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--SQSEISRRILKSK--- 228 (288)
T ss_pred ccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--hHHHHHHHHHccC---
Confidence 75443322233456899999999876654 7889999999999999999999985321111 1111111111100
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
. ..+......+.+++.+|++.+|++|||+.++.+.|+.
T Consensus 229 ----~----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 229 ----P----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ----C----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 0 0111123467899999999999999999888776653
No 359
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.98 E-value=2.1e-31 Score=299.25 Aligned_cols=265 Identities=19% Similarity=0.204 Sum_probs=194.1
Q ss_pred cCeEcccCceEEEEEEECCCcEEEEEEecCC--chhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCC
Q 001561 776 ANIIGCGGFGLVYKATLTNGTKAAVKRLSGD--CGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGS 853 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 853 (1052)
.+.+|.|+++.||++.. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 33445555555555544 6899999998754 34455679999999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC----
Q 001561 854 LDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT---- 929 (1052)
Q Consensus 854 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~---- 929 (1052)
+.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++|||.+........
T Consensus 86 l~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 86 CEDLLKTHF--PEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred HHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 999987642 33578899999999999999999986 999999999999999999999999999876532211
Q ss_pred --eeeecccccccccCccccCC--cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhc----cc---
Q 001561 930 --HVTTDLVGTLGYIPPEYSQT--LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSE----KR--- 998 (1052)
Q Consensus 930 --~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~----~~--- 998 (1052)
.......++..|+|||++.. ..++.++|||||||++|||++|+.||.... ......+........ ..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMP--ATQMLLEKVRGTVPCLLDKSTYPL 238 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhccCccccccCchhh
Confidence 11123457789999998765 357889999999999999999999996422 111111111100000 00
Q ss_pred ---ccc-----ccccc----ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcC
Q 001561 999 ---EVE-----IIDAS----IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIG 1048 (1052)
Q Consensus 999 ---~~~-----~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~ 1048 (1052)
... ..+.. ...........++.+++.+|++.+|++||+++|+++ ++..+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 000 00000 001112233457889999999999999999999998 666554
No 360
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.98 E-value=1.9e-31 Score=296.10 Aligned_cols=251 Identities=25% Similarity=0.329 Sum_probs=195.9
Q ss_pred CCcccCeEcccCceEEEEEEE----CCCcEEEEEEecCCch----hhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeE
Q 001561 772 NFNQANIIGCGGFGLVYKATL----TNGTKAAVKRLSGDCG----QMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDR 842 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 842 (1052)
+|++.+.||+|+||.||+|.. .+|..||+|++..... ...+.+.+|+++++++ +|++|+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999975 3688999999875322 2345678899999999 599999999999999999
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
++||||+++++|.+++.. ...+++..+..++.|+++|++|||+. +++||||||+||++++++.+||+|||++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 81 HLILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccce
Confidence 999999999999999874 34578899999999999999999986 99999999999999999999999999998
Q ss_pred ccCCCCCeeeecccccccccCccccCCc--CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 923 LLRPYDTHVTTDLVGTLGYIPPEYSQTL--TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 923 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
..............|+..|+|||..... .++.++||||||+++|+|++|+.||........ .............
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~-- 229 (290)
T cd05613 154 EFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSEP-- 229 (290)
T ss_pred ecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc--HHHHHHHhhccCC--
Confidence 7644332333345789999999987653 467899999999999999999999963221111 1111111111100
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRP-----FIEEVVT 1042 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1042 (1052)
. .+......+.+++.+|++.+|++|| ++.+++.
T Consensus 230 ~---------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 230 P---------YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred C---------CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 0 1111234678999999999999997 6677765
No 361
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.98 E-value=3.2e-31 Score=293.65 Aligned_cols=259 Identities=24% Similarity=0.325 Sum_probs=195.6
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch--hhHHHHHHHHHHHHhc---CCCceeeeeceEeeCCe-----
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG--QMEREFQAEVEALSRA---QHKNLVSLQGYCRHGND----- 841 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 841 (1052)
|++.+.||+|+||.||+|... ++..||+|++..... .....+.+|+.+++++ +|||++++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999976 589999999874322 2234566788777666 59999999999988776
Q ss_pred EEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccc
Q 001561 842 RLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLS 921 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a 921 (1052)
.+++|||+++ ++.+++.... ...+++..++.++.|+++||+|||+. +++|+||+|+||++++++.+||+|||.+
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhccc-CHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 8999999974 7888876532 23589999999999999999999986 9999999999999999999999999999
Q ss_pred cccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc-
Q 001561 922 RLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV- 1000 (1052)
Q Consensus 922 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~- 1000 (1052)
........ .....++..|+|||++.+..++.++||||||+++|||++|++||.... ..+....+..........
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07838 155 RIYSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS---EADQLDKIFDVIGLPSEEE 229 (287)
T ss_pred eeccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC---hHHHHHHHHHHcCCCChHh
Confidence 87643221 123457889999999988889999999999999999999999986422 222222222111100000
Q ss_pred ---------ccccccc---cchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1001 ---------EIIDASI---WHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1001 ---------~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
....... ...........+.+++.+|++.||.+||++.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000000 01111233467789999999999999999999875
No 362
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.98 E-value=8.9e-32 Score=305.61 Aligned_cols=263 Identities=24% Similarity=0.337 Sum_probs=195.5
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC------C
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG------N 840 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 840 (1052)
..+|...+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 368999999999999999999864 78999999987532 22335678999999999999999999998654 3
Q ss_pred eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccc
Q 001561 841 DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGL 920 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~ 920 (1052)
..++|+||+.. ++..+. +..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+
T Consensus 94 ~~~lv~e~~~~-~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred eEEEEeccccc-CHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 46899999964 665543 23578999999999999999999986 999999999999999999999999999
Q ss_pred ccccCCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc-
Q 001561 921 SRLLRPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR- 998 (1052)
Q Consensus 921 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~- 998 (1052)
++..... .....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||.... .......+....+...
T Consensus 164 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~---~~~~~~~~~~~~~~~~~ 236 (342)
T cd07879 164 ARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD---YLDQLTQILKVTGVPGP 236 (342)
T ss_pred CcCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHhcCCCCH
Confidence 9764321 223467889999998765 468899999999999999999999996421 1111111111000000
Q ss_pred ----------cccccc--cccc----chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcCc
Q 001561 999 ----------EVEIID--ASIW----HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIGI 1049 (1052)
Q Consensus 999 ----------~~~~~~--~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~~ 1049 (1052)
...... +... ..........+.+++.+|++.||++||+++|+++ +++..+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 237 EFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 000000 0000 0000112346789999999999999999999995 6777654
No 363
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.98 E-value=1.9e-31 Score=294.86 Aligned_cols=259 Identities=24% Similarity=0.334 Sum_probs=195.7
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch-hhHHHHHHHHHHHHhcC-CCceeeeeceEeeCCeEEEEEEec
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG-QMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
|++.+.||+|++|+||+|... +++.||+|++..... .......+|+..+++++ |||++++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999876 578899999875432 22334567999999999 999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
+|++.+++.... ...+++..+..++.|+++|++|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 -~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~- 153 (283)
T cd07830 81 -EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP- 153 (283)
T ss_pred -CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC-
Confidence 889988886532 34689999999999999999999986 99999999999999999999999999998764322
Q ss_pred eeeecccccccccCccccC-CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhc------------
Q 001561 930 HVTTDLVGTLGYIPPEYSQ-TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSE------------ 996 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~------------ 996 (1052)
......++..|+|||+.. ...++.++|+||||+++|||++|++||..... .+...........
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 154 -PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSE---IDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred -CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCCh---HHHHHHHHHhcCCCChhhhhhHhhh
Confidence 123356888999999764 45678999999999999999999999854321 1111111110000
Q ss_pred -ccccccccc---cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 997 -KREVEIIDA---SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 997 -~~~~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
......... .............+.+++.+|++.+|++||++.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 230 ASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000000 0000111112357899999999999999999999975
No 364
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.98 E-value=2e-31 Score=296.62 Aligned_cols=251 Identities=27% Similarity=0.433 Sum_probs=193.0
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhcC-CCceeeeeceEeeCCeEEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 847 (1052)
++|++.+.||+|+||.||+|.+. +++.||||++.... .....++.+|++++.+.. ||||+++++++.++...++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 46888999999999999999976 48999999987543 233455677787777775 9999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|++ +++.+++... ...+++..+..++.|++.|++|||+. ++|+||||+|+||++++++.+||+|||.+..+...
T Consensus 95 ~~~-~~l~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 95 LMS-TCLDKLLKRI---QGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred ccC-cCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 985 4676666542 34689999999999999999999973 48999999999999999999999999999765432
Q ss_pred CCeeeecccccccccCccccCCcC----CCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLT----ATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEII 1003 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
.. .....+++.|+|||.+.+.. ++.++||||||+++|||++|+.||.... ...+....+. ... .....
T Consensus 169 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~---~~~-~~~~~ 240 (296)
T cd06618 169 KA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK--TEFEVLTKIL---QEE-PPSLP 240 (296)
T ss_pred Cc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch--hHHHHHHHHh---cCC-CCCCC
Confidence 21 22335788999999876543 7889999999999999999999996321 1111111111 111 00000
Q ss_pred cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1004 DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
. ......++.+++.+|++.||++||++.++++
T Consensus 241 ~-------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 272 (296)
T cd06618 241 P-------NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ 272 (296)
T ss_pred C-------CCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 0012347899999999999999999999987
No 365
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.5e-31 Score=300.02 Aligned_cols=263 Identities=25% Similarity=0.318 Sum_probs=193.2
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCch--hhHHHHHHHHHHHHhcCCCceeeeeceEeeCC------
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG--QMEREFQAEVEALSRAQHKNLVSLQGYCRHGN------ 840 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 840 (1052)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999865 688999998864322 12345678999999999999999999875433
Q ss_pred --eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeec
Q 001561 841 --DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADF 918 (1052)
Q Consensus 841 --~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~Df 918 (1052)
..++|+||+++ ++...+.. ....+++..+..++.|+++||+|||+. +|+||||||+||++++++.++++||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 46999999975 56665543 244689999999999999999999986 9999999999999999999999999
Q ss_pred ccccccCCCCCe----------eeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHH
Q 001561 919 GLSRLLRPYDTH----------VTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLV 987 (1052)
Q Consensus 919 G~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~ 987 (1052)
|+++........ ......+++.|+|||...+ ..++.++||||||+++|||++|++||..... ....
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~---~~~~ 236 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD---IDQL 236 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH---HHHH
Confidence 999865432211 1123467889999997654 4578999999999999999999999964222 1211
Q ss_pred HHHHHhhhcccc---------cccc----cccccc---hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 988 SWVFQMKSEKRE---------VEII----DASIWH---KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 988 ~~~~~~~~~~~~---------~~~~----~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+.+......... .... ...... .........+.+++.+|++.+|++|||+.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 111111110000 0000 000000 000112256889999999999999999999875
No 366
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=1.5e-31 Score=304.08 Aligned_cols=270 Identities=23% Similarity=0.297 Sum_probs=200.5
Q ss_pred ccHHHHHHhhcCCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEe
Q 001561 761 LTVSDLLKSTNNFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCR 837 (1052)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 837 (1052)
....++...+++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 34456667789999999999999999999975 478999999987542 223456788999999999999999999886
Q ss_pred eC------CeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCC
Q 001561 838 HG------NDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKF 911 (1052)
Q Consensus 838 ~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~ 911 (1052)
.. ...+++++++ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||++++++
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCC
Confidence 43 3467888876 7888887753 3488999999999999999999986 999999999999999999
Q ss_pred CeEEeecccccccCCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHH
Q 001561 912 EAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWV 990 (1052)
Q Consensus 912 ~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~ 990 (1052)
.+||+|||+++..... .....+++.|+|||...+ ..++.++||||||+++|||++|+.||..... ......+
T Consensus 158 ~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~---~~~~~~~ 230 (345)
T cd07877 158 ELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH---IDQLKLI 230 (345)
T ss_pred CEEEeccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHH
Confidence 9999999999764321 233568889999998765 5678899999999999999999999953221 1111111
Q ss_pred HHhhhccc---cccccc--------------ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhh
Q 001561 991 FQMKSEKR---EVEIID--------------ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDG 1046 (1052)
Q Consensus 991 ~~~~~~~~---~~~~~~--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 1046 (1052)
........ ...+.+ .............++.+++.+|++.||.+||++.++++ ++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~ 305 (345)
T cd07877 231 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305 (345)
T ss_pred HHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence 11100000 000000 00000000012346889999999999999999999987 4443
No 367
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=4.2e-31 Score=288.27 Aligned_cols=241 Identities=24% Similarity=0.290 Sum_probs=185.7
Q ss_pred CeEcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHHHH-HhcCCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 777 NIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVEAL-SRAQHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
+.||+|+||.||+|... +|+.||+|++..... .....+..|..++ ...+|+|++++++++.+++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999865 688999999875432 1222344454444 445899999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
++|.+++.. ...+++..+..++.|++.||.|||+. +++||||+|+||++++++.++++|||+++....
T Consensus 82 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 82 GDCASLIKT----LGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 999999864 34588999999999999999999986 999999999999999999999999999876432
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
.....|++.|+|||...+..++.++||||+|+++|||++|..||.... ......... ..... ... ..
T Consensus 150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~---~~~~~---~~~----~~ 216 (260)
T cd05611 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET---PDAVFDNIL---SRRIN---WPE----EV 216 (260)
T ss_pred cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHH---hcccC---CCC----cc
Confidence 223468889999999888888999999999999999999999996322 112111111 10000 000 01
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1012 REKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1012 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.......+.+++.+|++.+|++||++.++.+
T Consensus 217 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 217 KEFCSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred cccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 1123457899999999999999997654433
No 368
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=1.8e-31 Score=298.67 Aligned_cols=244 Identities=27% Similarity=0.399 Sum_probs=192.3
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCC---chhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGD---CGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
.|+..+.||+|+||.||+|+.. ++..||+|.+... ......++.+|+++++.++|+|++++++++......++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3666788999999999999865 6788999988642 22334567889999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
|+. |++.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||++......
T Consensus 96 ~~~-~~l~~~~~~~---~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 96 YCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred ccC-CCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 996 5777766532 34578999999999999999999986 9999999999999999999999999998765432
Q ss_pred CCeeeecccccccccCccccC---CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQ---TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIID 1004 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
....|++.|+|||.+. ...++.++|||||||++|||++|+.||.... ..+ ......... ....
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~---~~~---~~~~~~~~~-~~~~-- 234 (308)
T cd06634 169 -----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN---AMS---ALYHIAQNE-SPAL-- 234 (308)
T ss_pred -----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc---HHH---HHHHHhhcC-CCCc--
Confidence 2346888999999864 3567889999999999999999999985321 111 111111110 0000
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
........+.+++.+|++.+|++||++.++++
T Consensus 235 ------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~ 266 (308)
T cd06634 235 ------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (308)
T ss_pred ------CcccccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence 01123346889999999999999999999987
No 369
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=8.2e-31 Score=293.89 Aligned_cols=243 Identities=28% Similarity=0.390 Sum_probs=191.4
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
|...+.||+|+||+||+|+.. +++.||+|++.... ......+.+|++++++++|||++++++++.+++..|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555677999999999999865 68899999986432 23335678899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+. |++.+++.. ....+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+.....
T Consensus 103 ~~-~~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 103 CL-GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred CC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 96 567776654 234689999999999999999999986 999999999999999999999999999865322
Q ss_pred CeeeecccccccccCccccC---CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYSQ---TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
.....|+..|+|||++. ...++.++||||||+++|||++|+.||.... ........ ..... ....
T Consensus 174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~---~~~~~~~~---~~~~~-~~~~-- 241 (313)
T cd06633 174 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN---AMSALYHI---AQNDS-PTLQ-- 241 (313)
T ss_pred ---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHH---HhcCC-CCCC--
Confidence 12356889999999874 4568889999999999999999999985321 11111111 11110 0100
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.......+.+++.+|++.+|.+||++.++++
T Consensus 242 ------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 242 ------SNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred ------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1112236889999999999999999999986
No 370
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=3.4e-31 Score=291.86 Aligned_cols=241 Identities=27% Similarity=0.340 Sum_probs=185.6
Q ss_pred eEcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHH---HHHhcCCCceeeeeceEeeCCeEEEEEEecc
Q 001561 778 IIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVE---ALSRAQHKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 778 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
+||+|+||.||+|... +++.||+|.+..... .....+..|.. .++...||+|+++++++.+++..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999864 688999998865421 11222334433 4444579999999999999999999999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+|+|.+++.. ...+++..+..++.|+++|++|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 81 g~~L~~~l~~----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~-- 151 (278)
T cd05606 81 GGDLHYHLSQ----HGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (278)
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--
Confidence 9999988863 34689999999999999999999986 99999999999999999999999999997654322
Q ss_pred eeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 931 VTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
.....|+..|+|||++.+. .++.++||||+|+++|||++|+.||........... .... .. .....
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~-~~~~--~~-------~~~~~-- 218 (278)
T cd05606 152 -PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMT--LT-------MAVEL-- 218 (278)
T ss_pred -CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH-HHHh--hc-------cCCCC--
Confidence 2234789999999988644 688999999999999999999999964322111111 1000 00 00111
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRP-----FIEEVVT 1042 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1042 (1052)
+...+.++.+++.+|+..+|.+|| ++.|+++
T Consensus 219 --~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 219 --PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred --CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 111234788999999999999999 9999986
No 371
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=2.3e-31 Score=293.68 Aligned_cols=248 Identities=24% Similarity=0.364 Sum_probs=200.7
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcC-CCceeeeeceEeeCCeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 845 (1052)
++|++.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++ ||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888999999999999999865 78999999987532 234467889999999998 99999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+++++|.+++.. ...+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++....
T Consensus 81 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 81 LEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 999999999999875 33689999999999999999999986 99999999999999999999999999998764
Q ss_pred CCCC-------------------eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhH
Q 001561 926 PYDT-------------------HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDL 986 (1052)
Q Consensus 926 ~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~ 986 (1052)
.... .......++..|+|||......++.++||||+|++++++++|+.||.... ....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~---~~~~ 230 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN---EYLT 230 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc---HHHH
Confidence 3321 11223467899999999888889999999999999999999999996322 1111
Q ss_pred HHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCH----HHHHH
Q 001561 987 VSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFI----EEVVT 1042 (1052)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~ 1042 (1052)
.+... .... ..+......+.+++.+|++.+|.+||++ .|+++
T Consensus 231 ~~~~~---~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 231 FQKIL---KLEY-----------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHH---hcCC-----------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 11111 0000 0111123468899999999999999999 77654
No 372
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=3.1e-31 Score=300.71 Aligned_cols=261 Identities=22% Similarity=0.226 Sum_probs=195.0
Q ss_pred cCCc-ccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhh--------------HHHHHHHHHHHHhcCCCceeeeec
Q 001561 771 NNFN-QANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQM--------------EREFQAEVEALSRAQHKNLVSLQG 834 (1052)
Q Consensus 771 ~~~~-~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~ 834 (1052)
++|. +.+.||+|+||+||+|... +++.||+|++....... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 3454 4577999999999999865 78999999886432211 124778999999999999999999
Q ss_pred eEeeCCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeE
Q 001561 835 YCRHGNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAH 914 (1052)
Q Consensus 835 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~k 914 (1052)
++..++..++||||++ |+|.+++.. ...+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDR----KIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEE
Confidence 9999999999999997 588888753 34588999999999999999999986 999999999999999999999
Q ss_pred EeecccccccCCC-------------CCeeeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCC
Q 001561 915 LADFGLSRLLRPY-------------DTHVTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKG 980 (1052)
Q Consensus 915 l~DfG~a~~~~~~-------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~ 980 (1052)
++|||.+...... .........+++.|+|||.+.+. .++.++||||+|+++|||++|++||....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~- 238 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN- 238 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-
Confidence 9999999865411 01111233568899999987654 46889999999999999999999996422
Q ss_pred CCchhHHHHHHHhhhcccccccc-----------cc---cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 981 KNCRDLVSWVFQMKSEKREVEII-----------DA---SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..+....+............. .. ............++.+++.+|++.+|++||+++|++.
T Consensus 239 --~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 239 --EIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred --HHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 222222222211111100000 00 0000001122457889999999999999999999986
No 373
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=1.4e-31 Score=291.89 Aligned_cols=250 Identities=24% Similarity=0.324 Sum_probs=196.1
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCC-----chhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGD-----CGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 845 (1052)
+|.+.+.||+|+||.||+|... .+..+++|..+.. ......++.+|+.++++++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4788899999999999999865 3444555554421 122334577899999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+++++|.+++.........+++..++.++.|+++|++|||+. +++|+||||+||++++ +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999999876554566799999999999999999999986 9999999999999985 579999999997764
Q ss_pred CCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
... .......|++.|+|||......++.++|+||||+++|+|++|..||... . ........... .. +
T Consensus 157 ~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~---~---~~~~~~~~~~~-~~-----~ 223 (260)
T cd08222 157 GSC-DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ---N---FLSVVLRIVEG-PT-----P 223 (260)
T ss_pred CCc-ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc---c---HHHHHHHHHcC-CC-----C
Confidence 322 2223356888999999988888899999999999999999999998521 1 11111111111 00 0
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..+.....++.+++.+|++.+|++||++.|+++
T Consensus 224 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 224 ----SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ----CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 112233457889999999999999999999975
No 374
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=1.6e-31 Score=301.28 Aligned_cols=265 Identities=23% Similarity=0.351 Sum_probs=196.8
Q ss_pred HHHHhhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEee-CC
Q 001561 765 DLLKSTNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRH-GN 840 (1052)
Q Consensus 765 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 840 (1052)
++...+++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 33456788999999999999999999855 78999999886432 2234567889999999999999999998865 56
Q ss_pred eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccc
Q 001561 841 DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGL 920 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~ 920 (1052)
..++|+||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||+|+||++++++.++++|||.
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~ 154 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS-----RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGL 154 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccc
Confidence 789999998 5688877753 3478888899999999999999986 999999999999999999999999999
Q ss_pred ccccCCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHH--------
Q 001561 921 SRLLRPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVF-------- 991 (1052)
Q Consensus 921 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~-------- 991 (1052)
+...... .....+++.|+|||.+.+ ..++.++||||||+++|+|++|++||................
T Consensus 155 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 230 (328)
T cd07856 155 ARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVI 230 (328)
T ss_pred ccccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9764321 123467889999998765 568999999999999999999999996432111100000000
Q ss_pred Hhhhccccccccc-ccccc-----hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 992 QMKSEKREVEIID-ASIWH-----KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 992 ~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.........+... ..... ........++.+++.+|++.+|++||++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 231 NTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred HhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000000 00000 001112357899999999999999999999987
No 375
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=2.6e-31 Score=301.72 Aligned_cols=266 Identities=22% Similarity=0.327 Sum_probs=195.5
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeC---------
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHG--------- 839 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 839 (1052)
..+|++.+.||.|+||.||+|... +|..||+|++........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 367999999999999999999865 6889999998765555566788999999999999999999876543
Q ss_pred -----CeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC-CCCCe
Q 001561 840 -----NDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD-EKFEA 913 (1052)
Q Consensus 840 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~-~~~~~ 913 (1052)
...++||||++ ++|.+++.. ..+++..++.++.|+++|++|||+. +|+||||||+||+++ +++.+
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ-----GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceE
Confidence 35789999997 588777743 3588999999999999999999986 999999999999998 45678
Q ss_pred EEeecccccccCCCCCe--eeecccccccccCccccC-CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHH
Q 001561 914 HLADFGLSRLLRPYDTH--VTTDLVGTLGYIPPEYSQ-TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWV 990 (1052)
Q Consensus 914 kl~DfG~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~ 990 (1052)
|++|||.++........ ......++..|+|||.+. +..++.++|||||||++|||++|+.||...... +.....
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~---~~~~~~ 231 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL---EQMQLI 231 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH
Confidence 99999999865432111 112236788999999754 456788999999999999999999999643211 111110
Q ss_pred HHhhhcccc-----------cccc----cc-cccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 991 FQMKSEKRE-----------VEII----DA-SIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 991 ~~~~~~~~~-----------~~~~----~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
......... .... .. ............++.+++.+|++.||++||++.|+++ +++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 232 LESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred HHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence 000000000 0000 00 0000001123346889999999999999999999985 66543
No 376
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-32 Score=293.69 Aligned_cols=244 Identities=23% Similarity=0.372 Sum_probs=199.8
Q ss_pred cCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCC
Q 001561 776 ANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENG 852 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 852 (1052)
.++||.|.||+||-|+++ +|+.||||++.+.. .+.+.+++.|+.+++.++||.||.+--.|+..++.++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 578999999999999865 89999999998653 445678899999999999999999999999999999999999766
Q ss_pred ChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC---CCCeEEeecccccccCCCCC
Q 001561 853 SLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE---KFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 853 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~---~~~~kl~DfG~a~~~~~~~~ 929 (1052)
-|+-.+.. ..+.+++.....+..||+.||.|||.. +|+|+|+||+|||+.. -.++|+||||+|+.++. .
T Consensus 649 MLEMILSs---EkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE--k 720 (888)
T KOG4236|consen 649 MLEMILSS---EKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE--K 720 (888)
T ss_pred HHHHHHHh---hcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch--h
Confidence 56655543 456688888899999999999999975 9999999999999964 46799999999999864 3
Q ss_pred eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
.....++|||.|+|||++..+.|...-|+||.|||+|--+.|..||.. +++..+.++....+... ..|
T Consensus 721 sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE--dEdIndQIQNAaFMyPp---------~PW- 788 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE--DEDINDQIQNAAFMYPP---------NPW- 788 (888)
T ss_pred hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC--ccchhHHhhccccccCC---------Cch-
Confidence 344567999999999999999999999999999999999999999952 22222333322222222 222
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+...+++++|...++..-++|-+.++.+.
T Consensus 789 ---~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 789 ---SEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred ---hhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 233447889999999999999999988765
No 377
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-31 Score=320.93 Aligned_cols=259 Identities=28% Similarity=0.442 Sum_probs=208.0
Q ss_pred cCCcccCeEcccCceEEEEEEEC----C----CcEEEEEEecCCch-hhHHHHHHHHHHHHhc-CCCceeeeeceEeeCC
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT----N----GTKAAVKRLSGDCG-QMEREFQAEVEALSRA-QHKNLVSLQGYCRHGN 840 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~----~----g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 840 (1052)
++..+.+.+|+|.||.|++|... . ...||||.++.... ...+.+..|+++|+.+ +|+||+.++|+|.+.+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 34455669999999999999743 1 34799999885543 4456789999999999 5999999999999999
Q ss_pred eEEEEEEeccCCChhhhhhccc---CC-------c--cccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC
Q 001561 841 DRLLIYSYMENGSLDYWLHESV---DK-------D--SVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD 908 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~---~~-------~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~ 908 (1052)
..++|+||++.|+|.++++..+ .. . ..++..+.+.++.|||.|++||++. +++|||+.++|||++
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEec
Confidence 9999999999999999998765 10 1 2489999999999999999999986 999999999999999
Q ss_pred CCCCeEEeecccccccCCCCCeeeecccc--cccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchh
Q 001561 909 EKFEAHLADFGLSRLLRPYDTHVTTDLVG--TLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRD 985 (1052)
Q Consensus 909 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~ 985 (1052)
++..+||+|||+|+...+..........| ...|||||.+....++.++|||||||++||+++ |..||.... ...+
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~--~~~~ 530 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP--PTEE 530 (609)
T ss_pred CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC--cHHH
Confidence 99999999999999765544443332233 336999999999999999999999999999999 999996421 1223
Q ss_pred HHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 986 LVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
+.+++....+ ...+..+..+++++|+.||+.+|++||++.|+++.++..
T Consensus 531 l~~~l~~G~r-------------~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 531 LLEFLKEGNR-------------MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred HHHHHhcCCC-------------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 3332222111 122334456899999999999999999999999998874
No 378
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=4.1e-31 Score=292.06 Aligned_cols=259 Identities=26% Similarity=0.336 Sum_probs=198.5
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
|+..+.||+|++|.||+|... +++.||+|++.... ....+.+..|++++++++|+|++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999876 58999999987653 333456788999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
+ ++|.+++... ...+++..+..++.+++.|++|||+. +|+||||+|+||++++++.++|+|||.++.......
T Consensus 81 ~-~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 81 D-MDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred C-cCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 8 5899988753 24689999999999999999999996 999999999999999999999999999987643322
Q ss_pred eeeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccc---------
Q 001561 930 HVTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKRE--------- 999 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~--------- 999 (1052)
......++..|+|||.+.+. .++.++||||||+++||+++|++||.... ..+....+.........
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07829 154 -TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS---EIDQLFKIFQILGTPTEESWPGVTKL 229 (282)
T ss_pred -ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc---HHHHHHHHHHHhCCCcHHHHHhhccc
Confidence 22234567789999987666 78899999999999999999999996422 12222222111110000
Q ss_pred ---ccccc---ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1000 ---VEIID---ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1000 ---~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
..... ........+.....+.+++.+|++.+|++||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 230 PDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00000 00000001112457899999999999999999999975
No 379
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=7.6e-32 Score=280.27 Aligned_cols=268 Identities=23% Similarity=0.308 Sum_probs=211.7
Q ss_pred cHHHHHHhhcCCcccCeEcccCceEEEEEEECCC------cEEEEEEecCCchh-hHHHHHHHHHHHHhcCCCceeeeec
Q 001561 762 TVSDLLKSTNNFNQANIIGCGGFGLVYKATLTNG------TKAAVKRLSGDCGQ-MEREFQAEVEALSRAQHKNLVSLQG 834 (1052)
Q Consensus 762 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g------~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~ 834 (1052)
...++.....+++...++.+|.||+||+|.|.+. +.|-+|.++....+ ....+..|.-.+..+.|||+.++.+
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 3456666777899999999999999999987643 34667776654433 3356778888888999999999999
Q ss_pred eEee-CCeEEEEEEeccCCChhhhhhccc----CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC
Q 001561 835 YCRH-GNDRLLIYSYMENGSLDYWLHESV----DKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE 909 (1052)
Q Consensus 835 ~~~~-~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~ 909 (1052)
++.+ .+..+++|.++.-|+|..|+...+ ...+.++..+...++.|++.|++|||++ +|||.||.++|.+||+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehh
Confidence 8865 467789999999999999998332 2344577788899999999999999997 9999999999999999
Q ss_pred CCCeEEeecccccccCCCCCeeeeccc-ccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHH
Q 001561 910 KFEAHLADFGLSRLLRPYDTHVTTDLV-GTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLV 987 (1052)
Q Consensus 910 ~~~~kl~DfG~a~~~~~~~~~~~~~~~-gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~ 987 (1052)
..++|++|=.+++.+-+.+.+.-.+.- ....||+||.+....|+.++|||||||++|||+| |+.|+..-.+. +..
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf---Em~ 508 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF---EME 508 (563)
T ss_pred heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH---HHH
Confidence 999999999999988776655444332 3448999999999999999999999999999999 99998632211 111
Q ss_pred HHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 988 SWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
. ..++..+ ...+..++.+++.+|..||..+|++||+++|++.-|.++.
T Consensus 509 ~---ylkdGyR----------laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 509 H---YLKDGYR----------LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred H---HHhccce----------ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 1 1111111 1223345668999999999999999999999999998764
No 380
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=3.2e-31 Score=301.11 Aligned_cols=263 Identities=25% Similarity=0.340 Sum_probs=198.8
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCe----
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGND---- 841 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 841 (1052)
..++|++.+.||+|++|.||+|+.. ++..||+|++.... ....+.+.+|+.++++++|||++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3567999999999999999999876 67899999886432 2334567789999999999999999998876554
Q ss_pred --EEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecc
Q 001561 842 --RLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFG 919 (1052)
Q Consensus 842 --~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG 919 (1052)
.++|+||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||++++++.++|+|||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 6688888753 4589999999999999999999986 99999999999999999999999999
Q ss_pred cccccCCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc
Q 001561 920 LSRLLRPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 920 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
++...... .....+++.|+|||...+ ..++.++||||+|+++|||++|+.||.... ..+....+........
T Consensus 164 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~---~~~~~~~i~~~~~~~~ 236 (343)
T cd07851 164 LARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSD---HIDQLKRIMNLVGTPD 236 (343)
T ss_pred cccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHhcCCCC
Confidence 99875432 233467889999998754 467889999999999999999999996322 1111211111111000
Q ss_pred c-----------ccccc------ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 999 E-----------VEIID------ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 999 ~-----------~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
. ..... .............++.+++.+|++.+|++|||+.|+++ ++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~ 304 (343)
T cd07851 237 EELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEY 304 (343)
T ss_pred HHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcccc
Confidence 0 00000 00000001112457899999999999999999999987 55443
No 381
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.9e-32 Score=282.73 Aligned_cols=240 Identities=26% Similarity=0.345 Sum_probs=193.2
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHH---HHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMER---EFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~---~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 845 (1052)
.+|....+||+|+||+|-.|..+ +.+-+|||+++++.....+ --..|-+++... +-|.+++++..|+.-++.|.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 36888999999999999999765 5678999999876532222 124456666655 578999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|||+.||+|-.+++. -+.+.+..+..+|.+||-||-+||+. +|+.||+|.+|||+|.+|++||+|||+++.--
T Consensus 429 MEyvnGGDLMyhiQQ----~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQ----VGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred EEEecCchhhhHHHH----hcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccc
Confidence 999999999998885 34567788999999999999999985 99999999999999999999999999998632
Q ss_pred CCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccc
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDA 1005 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
- ....+.+++|||.|+|||++...+|..++|+|||||++|||+.|++||++ +..+++.+.+....
T Consensus 502 ~-~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG---eDE~elF~aI~ehn----------- 566 (683)
T KOG0696|consen 502 F-DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG---EDEDELFQAIMEHN----------- 566 (683)
T ss_pred c-CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC---CCHHHHHHHHHHcc-----------
Confidence 2 33345678999999999999999999999999999999999999999974 33334443332211
Q ss_pred cccchhhHHHHHHHHHHHHHcccCCCCCCC
Q 001561 1006 SIWHKDREKQLLEMLEIACKCIDQDPRRRP 1035 (1052)
Q Consensus 1006 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1035 (1052)
-.++...+.++..+....+.+.|.+|-
T Consensus 567 ---vsyPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 567 ---VSYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred ---CcCcccccHHHHHHHHHHhhcCCcccc
Confidence 122333445778888899999999985
No 382
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=4.1e-31 Score=300.16 Aligned_cols=263 Identities=22% Similarity=0.315 Sum_probs=197.2
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCC-----
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGN----- 840 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 840 (1052)
..++|++.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4568999999999999999999754 78999999986432 223456789999999999999999999887543
Q ss_pred -eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecc
Q 001561 841 -DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFG 919 (1052)
Q Consensus 841 -~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG 919 (1052)
..++||||+ +++|.+++.. ..+++..++.++.|+++|++|||+. +|+||||||+||+++.++.++++|||
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH-----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 458999999 7788887753 3588999999999999999999986 99999999999999999999999999
Q ss_pred cccccCCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc
Q 001561 920 LSRLLRPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 920 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
++...... .....+++.|+|||.+.+ ..++.++|+||+|+++|++++|+.||..... ...............
T Consensus 164 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~---~~~~~~~~~~~~~~~ 236 (343)
T cd07880 164 LARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH---LDQLMEIMKVTGTPS 236 (343)
T ss_pred cccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHhcCCCC
Confidence 99865432 223467889999998765 4588899999999999999999999964221 111111100000000
Q ss_pred -----------ccccc------cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 999 -----------EVEII------DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 999 -----------~~~~~------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
..... ...............+.+++.+|++.||++||++.++++ +++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 237 KEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred HHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence 00000 000000001122346889999999999999999999995 66654
No 383
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=1e-30 Score=295.88 Aligned_cols=265 Identities=23% Similarity=0.286 Sum_probs=194.4
Q ss_pred CCcccCeEcccCceEEEEEEEC-C--CcEEEEEEecCCc--hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeC----Ce
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-N--GTKAAVKRLSGDC--GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHG----ND 841 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~--g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~ 841 (1052)
+|++.+.||+|+||.||+|... + +..||+|++.... ....+.+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778899999999999999865 4 7789999986432 22345678899999999 599999999875432 45
Q ss_pred EEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccc
Q 001561 842 RLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLS 921 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a 921 (1052)
.++++||++ ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.+
T Consensus 81 ~~~~~e~~~-~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS----GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEEeccc-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 788899886 588887753 45689999999999999999999986 9999999999999999999999999999
Q ss_pred cccCCCCCe---eeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcc
Q 001561 922 RLLRPYDTH---VTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEK 997 (1052)
Q Consensus 922 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
+........ ......|++.|+|||+..+ ..++.++||||+|+++|+|++|++||.... .......+.......
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~---~~~~~~~~~~~~~~~ 229 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKD---YVDQLNQILQVLGTP 229 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCC---HHHHHHHHHHHhCCC
Confidence 875432211 1233578999999997655 568899999999999999999999996422 111221111111000
Q ss_pred c-----------ccc---cc---cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 998 R-----------EVE---II---DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 998 ~-----------~~~---~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
. ... .. ...............+.+++.+|++.+|++||++.|+++ ++...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 230 DEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred CHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence 0 000 00 000000000112347889999999999999999999987 55543
No 384
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-31 Score=246.51 Aligned_cols=260 Identities=23% Similarity=0.342 Sum_probs=200.2
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+|...++||+|.||+||+|+.. +++.||+|+++.+. ........+|+-+++.++|+|||++++....+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 4556778999999999999854 78999999987443 33345678999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+.. +|..+... -.+.++.+.++.++.|+++|+.|+|++ ++.|||+||+|.+++.+|+.|++|||+|+.++-..
T Consensus 83 cdq-dlkkyfds---lng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 83 CDQ-DLKKYFDS---LNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred hhH-HHHHHHHh---cCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 964 67766654 355689999999999999999999998 99999999999999999999999999999876432
Q ss_pred CeeeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhhhccccc------
Q 001561 929 THVTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMKSEKREV------ 1000 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------ 1000 (1052)
......+-|..|++|.++.+. -|++..|+||-|||+.|+.. |++-|. +....+....++.........
T Consensus 156 -rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfp---g~dvddqlkrif~~lg~p~ed~wps~t 231 (292)
T KOG0662|consen 156 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP---GNDVDDQLKRIFRLLGTPTEDQWPSMT 231 (292)
T ss_pred -EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCC---CCcHHHHHHHHHHHhCCCccccCCccc
Confidence 334456779999999987765 57889999999999999998 555554 334445555555544332211
Q ss_pred ccccccccchhhH-----HHH----HHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1001 EIIDASIWHKDRE-----KQL----LEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~-----~~~----~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
...|-.....++. ... ..=.+++.+.+.-+|.+|.+++++++
T Consensus 232 ~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 232 KLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred cCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 1222222222211 111 13368888999999999999999876
No 385
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1e-31 Score=299.50 Aligned_cols=239 Identities=24% Similarity=0.284 Sum_probs=192.3
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
...|+....+|.|+|+.|-.+... ++...+||++.+.. .+-.+|+.++.+. +||||+++.+.+.++.+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 456777777999999999888754 78899999997652 2345677666666 69999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEE-CCCCCeEEeecccccccCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILL-DEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill-~~~~~~kl~DfG~a~~~~~ 926 (1052)
.+.|+.+.+.+... .... .++..|+.+++.|+.|||++ ||+|||+||+|||+ ++.++++|+|||.++...+
T Consensus 397 ~l~g~ell~ri~~~----~~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 397 LLDGGELLRRIRSK----PEFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred hccccHHHHHHHhc----chhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 99999887766532 2223 67788999999999999996 99999999999999 5999999999999998765
Q ss_pred CCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccc
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDAS 1006 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
. ....+-|..|.|||+.....+++++|+||||++||+|++|+.||....+. .++.. ....
T Consensus 469 ~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~~----~i~~---------- 528 (612)
T KOG0603|consen 469 S----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIHT----RIQM---------- 528 (612)
T ss_pred h----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHHH----hhcC----------
Confidence 4 22235688999999999999999999999999999999999999753322 11111 1111
Q ss_pred ccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1007 IWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1007 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.++....+.++.+|+.+|++.||.+||+|+++..
T Consensus 529 --~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 529 --PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred --CccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 1122445668999999999999999999999865
No 386
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-32 Score=270.88 Aligned_cols=252 Identities=26% Similarity=0.359 Sum_probs=193.7
Q ss_pred cCeEcccCceEEEEEEEC-CCcEEEEEEecCCch-hhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEEeccCC
Q 001561 776 ANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCG-QMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYSYMENG 852 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 852 (1052)
...||.|+||+|+|-.++ .|+..|||+++.... ..++++..|.++..+- +.||||+++|.+..++..|+.||.|+-
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~- 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI- 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence 457999999999999765 799999999986554 5567888898876665 699999999999999999999999954
Q ss_pred Chhhhhhc-ccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 853 SLDYWLHE-SVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 853 ~L~~~l~~-~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
+++.+-.. +......+++...-+|+...+.||.||-.. -.|+|||+||+|||+|..|.+|+||||.+..+... --
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S--iA 223 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS--IA 223 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHHHH--HH
Confidence 55443321 112455688888889999999999999874 68999999999999999999999999999776432 11
Q ss_pred eecccccccccCccccCC--cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccc
Q 001561 932 TTDLVGTLGYIPPEYSQT--LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWH 1009 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
.+..+|-..|||||.+.. ..|+.++||||+|+++||+.||+.||..+. +..+.+.+.....+..-..+
T Consensus 224 kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-----svfeql~~Vv~gdpp~l~~~----- 293 (361)
T KOG1006|consen 224 KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-----SVFEQLCQVVIGDPPILLFD----- 293 (361)
T ss_pred hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-----HHHHHHHHHHcCCCCeecCc-----
Confidence 233478889999997653 358999999999999999999999997432 23333333222221111111
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1010 KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1010 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.........+.+++..|+.+|-..||.+.++.+
T Consensus 294 ~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 294 KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred ccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 112234557899999999999999999999876
No 387
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=8.3e-31 Score=299.25 Aligned_cols=255 Identities=27% Similarity=0.414 Sum_probs=208.1
Q ss_pred HHhhcCCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCchhhHHHHHHHHHHHHhc-CCCceeeeeceEee-----C
Q 001561 767 LKSTNNFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDCGQMEREFQAEVEALSRA-QHKNLVSLQGYCRH-----G 839 (1052)
Q Consensus 767 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-----~ 839 (1052)
...+..|++.++||+|.+|.||+++. ++++.+|+|+...+.. ..++++.|.++++.. .|||++.++|++.. +
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 33456788899999999999999974 4788999998875543 345678899999888 69999999998853 5
Q ss_pred CeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecc
Q 001561 840 NDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFG 919 (1052)
Q Consensus 840 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG 919 (1052)
++.|+|||||.+|+..+.+.... +..+.|+.+..|.+.++.|+.|||.. .++|||||-.|||+++++.||++|||
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFG 168 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFG 168 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeee
Confidence 78999999999999999998765 77899999999999999999999986 99999999999999999999999999
Q ss_pred cccccCCCCCeeeecccccccccCccccC-----CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhh
Q 001561 920 LSRLLRPYDTHVTTDLVGTLGYIPPEYSQ-----TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMK 994 (1052)
Q Consensus 920 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~ 994 (1052)
.+..+... .......+|||.|||||++. ...|+.++|+||+|++..||.-|.+|+..+-+ ...++...
T Consensus 169 vSaQldsT-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP------mraLF~Ip 241 (953)
T KOG0587|consen 169 VSAQLDST-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP------MRALFLIP 241 (953)
T ss_pred eeeeeecc-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch------hhhhccCC
Confidence 99887542 23345579999999999864 34567789999999999999999999864321 11111111
Q ss_pred hcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 995 SEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+ .+......+..+..++.++|..|+.+|-++||++.++++
T Consensus 242 R--------NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 242 R--------NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred C--------CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 1 122223345677789999999999999999999999876
No 388
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2.1e-30 Score=316.72 Aligned_cols=145 Identities=30% Similarity=0.422 Sum_probs=130.5
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
++|++.+.||+|+||+||+|... +++.||+|+++... ......+..|+.+++.++||||+++++++...+..|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57899999999999999999876 78999999987542 233467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
||+++++|.+++.. ...+++..++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999864 23578899999999999999999986 99999999999999999999999999986
No 389
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=5.1e-30 Score=277.87 Aligned_cols=236 Identities=26% Similarity=0.313 Sum_probs=191.3
Q ss_pred EcccCceEEEEEEEC-CCcEEEEEEecCCch---hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCCh
Q 001561 779 IGCGGFGLVYKATLT-NGTKAAVKRLSGDCG---QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSL 854 (1052)
Q Consensus 779 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 854 (1052)
||+|+||.||++... +++.||+|++..... .....+..|++++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999876 589999999875432 2345788999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeeeec
Q 001561 855 DYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTD 934 (1052)
Q Consensus 855 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 934 (1052)
.+++... ..+++..+..++.|+++|+.|+|+. +++|+||+|+||+++.++.++++|||.+....... .....
T Consensus 81 ~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~ 152 (250)
T cd05123 81 FSHLSKE----GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNT 152 (250)
T ss_pred HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccC
Confidence 9998743 3589999999999999999999986 99999999999999999999999999998764322 12334
Q ss_pred ccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHH
Q 001561 935 LVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREK 1014 (1052)
Q Consensus 935 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1052)
..++..|+|||...+...+.++|+||||+++|++++|+.||.... .......+.. ... ..+..
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~---~~~~~~~~~~---~~~-----------~~~~~ 215 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED---RKEIYEKILK---DPL-----------RFPEF 215 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHhc---CCC-----------CCCCC
Confidence 578889999999988888999999999999999999999996321 1122211111 000 00111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHH
Q 001561 1015 QLLEMLEIACKCIDQDPRRRPFIEE 1039 (1052)
Q Consensus 1015 ~~~~l~~li~~cl~~dP~~RPs~~e 1039 (1052)
....+.+++.+|+..||++||++.+
T Consensus 216 ~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 216 LSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCHHHHHHHHHHhcCCHhhCCCccc
Confidence 1346889999999999999999954
No 390
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=278.83 Aligned_cols=259 Identities=20% Similarity=0.306 Sum_probs=199.7
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcC--CC----ceeeeeceEeeCCeE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQ--HK----NLVSLQGYCRHGNDR 842 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~----niv~l~~~~~~~~~~ 842 (1052)
+++|.+...+|+|.||.|-++... .+..||+|+++.- ....+...-|++++.++. .| -+|++.+||.-.++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 578999999999999999999754 5789999988633 344455678999999993 22 388999999999999
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC-------------
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE------------- 909 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~------------- 909 (1052)
++|+|.+ |-++.+++... ...+++...++.|+.|++++++|||+. +++|-|+||+||++.+
T Consensus 167 Civfell-G~S~~dFlk~N--~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKEN--NYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred EEEEecc-ChhHHHHhccC--CccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCcc
Confidence 9999988 66899999764 456789999999999999999999997 9999999999999832
Q ss_pred -------CCCeEEeecccccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCC
Q 001561 910 -------KFEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKN 982 (1052)
Q Consensus 910 -------~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~ 982 (1052)
...+||+|||.|+...... ...+.|..|+|||++.+-.++.++||||+||||+|++||..-|+...+.+
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E 316 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE 316 (415)
T ss_pred ceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH
Confidence 2458999999998754332 45688999999999999999999999999999999999999997543222
Q ss_pred chhHHHHHHHhhhccccccc-------------cc-------c---------cc---cchhhHHHHHHHHHHHHHcccCC
Q 001561 983 CRDLVSWVFQMKSEKREVEI-------------ID-------A---------SI---WHKDREKQLLEMLEIACKCIDQD 1030 (1052)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~-------------~~-------~---------~~---~~~~~~~~~~~l~~li~~cl~~d 1030 (1052)
....+....+..+...+ +| . .. .......+..++.+|+.+|+..|
T Consensus 317 ---HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fD 393 (415)
T KOG0671|consen 317 ---HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFD 393 (415)
T ss_pred ---HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccC
Confidence 22222222211110000 00 0 00 00011233457999999999999
Q ss_pred CCCCCCHHHHHH
Q 001561 1031 PRRRPFIEEVVT 1042 (1052)
Q Consensus 1031 P~~RPs~~evl~ 1042 (1052)
|.+|+|++|++.
T Consensus 394 P~~RiTl~EAL~ 405 (415)
T KOG0671|consen 394 PARRITLREALS 405 (415)
T ss_pred ccccccHHHHhc
Confidence 999999999986
No 391
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.5e-32 Score=288.18 Aligned_cols=241 Identities=21% Similarity=0.274 Sum_probs=196.8
Q ss_pred CCcccCeEcccCceEEEEEEECCCc-EEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLTNGT-KAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~~g~-~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
+++.+..||.|+||.|-.+...... .+|+|.+++.. ...++.+..|-.+|...+.|.||+++..|.+....|+.||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 3455678999999999999876433 48888877543 3344557889999999999999999999999999999999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
-|-||.+...+++ .+.++...+..++..+++|++|||+. +||+||+||+|.++|.+|.+|+.|||+|+.+...
T Consensus 501 aClGGElWTiLrd----Rg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 501 ACLGGELWTILRD----RGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhcCchhhhhhhh----cCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999985 56688889999999999999999996 9999999999999999999999999999998754
Q ss_pred CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccc
Q 001561 928 DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASI 1007 (1052)
Q Consensus 928 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
..+-+++|||.|.|||++..+.++.++|.||+|+++|||++|.+||.+..+-....++ .... |.
T Consensus 574 --~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~I---LkGi---------d~-- 637 (732)
T KOG0614|consen 574 --RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLI---LKGI---------DK-- 637 (732)
T ss_pred --CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH---Hhhh---------hh--
Confidence 3455689999999999999999999999999999999999999999753221111111 1111 10
Q ss_pred cchhhHHHHHHHHHHHHHcccCCCCCCCC
Q 001561 1008 WHKDREKQLLEMLEIACKCIDQDPRRRPF 1036 (1052)
Q Consensus 1008 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs 1036 (1052)
..++........++|++.+...|.+|-.
T Consensus 638 -i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 638 -IEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred -hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 1122334456789999999999999975
No 392
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=5.7e-32 Score=265.72 Aligned_cols=265 Identities=25% Similarity=0.348 Sum_probs=191.5
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecC--CchhhHHHHHHHHHHHHhcCCCceeeeeceEeeC--------
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSG--DCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHG-------- 839 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 839 (1052)
..|+....||+|.||.||+|+.+ +|++||+|++-- +.........+|++++..++|+|++.+++.|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 34666788999999999999855 678889886532 1122223457899999999999999999988532
Q ss_pred CeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecc
Q 001561 840 NDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFG 919 (1052)
Q Consensus 840 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG 919 (1052)
...|+||++++. +|.-.+.. ....++..++.+++.++..||.|+|+. .|+|||+||+|+||+.+|.+||+|||
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn---~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSN---RKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcC---ccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccc
Confidence 347999999976 56665543 345688999999999999999999997 99999999999999999999999999
Q ss_pred cccccCCCCCe---eeecccccccccCcccc-CCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhh
Q 001561 920 LSRLLRPYDTH---VTTDLVGTLGYIPPEYS-QTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKS 995 (1052)
Q Consensus 920 ~a~~~~~~~~~---~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 995 (1052)
+|+.+...... ..+..+-|..|++||.+ ....++++.|||+-|||+.||+||.+-|++......-.++........
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 99876433221 23445779999999965 556799999999999999999999998864322111122221111111
Q ss_pred cccccccccccc----------cchhh--HHH------HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 996 EKREVEIIDASI----------WHKDR--EKQ------LLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 996 ~~~~~~~~~~~~----------~~~~~--~~~------~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+....+..-.+ ...++ +.. ..+..+++.+++..||.+|+++++++.
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 111111110000 00110 011 126789999999999999999999976
No 393
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=4.9e-30 Score=275.46 Aligned_cols=221 Identities=22% Similarity=0.207 Sum_probs=176.2
Q ss_pred cCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCChhhhhhc
Q 001561 782 GGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSLDYWLHE 860 (1052)
Q Consensus 782 G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 860 (1052)
|.+|.||++... +++.||+|++.... .+..|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999865 78999999987542 234455555566799999999999999999999999999999998864
Q ss_pred ccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeeeeccccccc
Q 001561 861 SVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTDLVGTLG 940 (1052)
Q Consensus 861 ~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~ 940 (1052)
. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++++|||.+...... .....++..
T Consensus 79 ~----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~ 147 (237)
T cd05576 79 F----LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENM 147 (237)
T ss_pred h----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCcc
Confidence 3 3489999999999999999999986 9999999999999999999999999988665432 122356778
Q ss_pred ccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHH
Q 001561 941 YIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEML 1020 (1052)
Q Consensus 941 y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1020 (1052)
|+|||......++.++||||+|+++|||++|+.|+...... . ... ... ..+......+.
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~-------~~~--~~~-------~~~~~~~~~~~ 206 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----I-------NTH--TTL-------NIPEWVSEEAR 206 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c-------ccc--ccc-------CCcccCCHHHH
Confidence 99999998888999999999999999999999987521100 0 000 000 01111234688
Q ss_pred HHHHHcccCCCCCCCCHHH
Q 001561 1021 EIACKCIDQDPRRRPFIEE 1039 (1052)
Q Consensus 1021 ~li~~cl~~dP~~RPs~~e 1039 (1052)
+++.+|++.||++||++.+
T Consensus 207 ~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 207 SLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred HHHHHHccCCHHHhcCCCc
Confidence 9999999999999999743
No 394
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=6.8e-30 Score=244.49 Aligned_cols=201 Identities=28% Similarity=0.402 Sum_probs=169.7
Q ss_pred CcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc-hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEEec
Q 001561 773 FNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC-GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
......||+|++|.|-+.++. +|...|+|++.... .+..++..+|+++..+. ..|.+|.++|.+......|+.||.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M 127 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM 127 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence 344567999999999888754 89999999997543 34456677888876655 7999999999999899999999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
+- +|+.+-.+....+..+++...-+||..+++|+.|||+. -.++|||+||+|||++.+|++|+||||.+..+...-.
T Consensus 128 ~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA 204 (282)
T KOG0984|consen 128 DT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIA 204 (282)
T ss_pred hh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehhhhH
Confidence 54 88888888778889999999999999999999999996 6899999999999999999999999999977643211
Q ss_pred eeeecccccccccCccccC----CcCCCcccchHHHHHHHHHHHcCCCCCccc
Q 001561 930 HVTTDLVGTLGYIPPEYSQ----TLTATCRGDVYSFGVVLLELLTGRRPVEVC 978 (1052)
Q Consensus 930 ~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwslGvil~elltG~~pf~~~ 978 (1052)
.+...|...|||||.+. ...|+.++||||+|+++.||.+++.||+.+
T Consensus 205 --kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 205 --KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred --HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 12246888999999764 347899999999999999999999999753
No 395
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=2.6e-29 Score=290.82 Aligned_cols=261 Identities=21% Similarity=0.324 Sum_probs=182.4
Q ss_pred hhcCCcccCeEcccCceEEEEEEE-----------------CCCcEEEEEEecCCchhhHHH--------------HHHH
Q 001561 769 STNNFNQANIIGCGGFGLVYKATL-----------------TNGTKAAVKRLSGDCGQMERE--------------FQAE 817 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~-----------------~~g~~vavK~~~~~~~~~~~~--------------~~~E 817 (1052)
..++|++.++||+|+||+||+|.. .+++.||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 356899999999999999999964 235679999987543322222 3346
Q ss_pred HHHHHhcCCCce-----eeeeceEee--------CCeEEEEEEeccCCChhhhhhcccC--------------------C
Q 001561 818 VEALSRAQHKNL-----VSLQGYCRH--------GNDRLLIYSYMENGSLDYWLHESVD--------------------K 864 (1052)
Q Consensus 818 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~ 864 (1052)
+.++.+++|.++ ++++++|.. .+..++||||+++|+|.++++.... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777876654 677777753 3567999999999999999875321 1
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeeeecccccccccCc
Q 001561 865 DSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPP 944 (1052)
Q Consensus 865 ~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aP 944 (1052)
...+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++..............+|+.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12356788999999999999999986 999999999999999999999999999976543222212223458899999
Q ss_pred cccCCcCC----------------------CcccchHHHHHHHHHHHcCCC-CCcccCCCC------chhHHHHHHHhhh
Q 001561 945 EYSQTLTA----------------------TCRGDVYSFGVVLLELLTGRR-PVEVCKGKN------CRDLVSWVFQMKS 995 (1052)
Q Consensus 945 E~~~~~~~----------------------~~~~DvwslGvil~elltG~~-pf~~~~~~~------~~~~~~~~~~~~~ 995 (1052)
|.+..... ..+.||||+||++|||++|.. ||......+ ..+...|... ..
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~-~~ 458 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY-KG 458 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh-cc
Confidence 97653221 124799999999999999885 764321100 1111112111 00
Q ss_pred cccccccccccccchhhHHHHHHHHHHHHHcccCCC---CCCCCHHHHHH
Q 001561 996 EKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDP---RRRPFIEEVVT 1042 (1052)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~ 1042 (1052)
.. .+-.. .........+++.+|+..+| .+|+|++|+++
T Consensus 459 ~~-----~~~~~----~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 459 QK-----YDFSL----LDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cC-----CCccc----ccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 00 01111 11234478899999999766 68999999986
No 396
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=1.6e-29 Score=300.91 Aligned_cols=261 Identities=20% Similarity=0.236 Sum_probs=170.6
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-C----CcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeece------Ee
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-N----GTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGY------CR 837 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~----g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~ 837 (1052)
..++|+..+.||+|+||.||+|.+. + +..||+|++...... +.+..| .++...+.+++.++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 3567999999999999999999875 4 689999987643211 111111 1222223333322222 24
Q ss_pred eCCeEEEEEEeccCCChhhhhhcccCC----------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCC
Q 001561 838 HGNDRLLIYSYMENGSLDYWLHESVDK----------------DSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVK 901 (1052)
Q Consensus 838 ~~~~~~lv~e~~~~g~L~~~l~~~~~~----------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlk 901 (1052)
++...++||||+++++|.++++..... ........+..++.|++.||+|||+. +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 566789999999999999988753210 01112344668999999999999986 99999999
Q ss_pred CCceEECC-CCCeEEeecccccccCCCCCeeeecccccccccCccccCCc----------------------CCCcccch
Q 001561 902 SSNILLDE-KFEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTL----------------------TATCRGDV 958 (1052)
Q Consensus 902 p~Nill~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~Dv 958 (1052)
|+|||+++ ++.+||+|||+|+.+............+|+.|+|||.+... .++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999996 58999999999987654444444557899999999954321 23446799
Q ss_pred HHHHHHHHHHHcCCCCCcccC-------CCCchhHHHHHHHhhhcccccccccccccc--hhhHHHHHHHHHHHHHcccC
Q 001561 959 YSFGVVLLELLTGRRPVEVCK-------GKNCRDLVSWVFQMKSEKREVEIIDASIWH--KDREKQLLEMLEIACKCIDQ 1029 (1052)
Q Consensus 959 wslGvil~elltG~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~ 1029 (1052)
|||||++|||+++..|++... .....+...|....... ....... ...........+++.+|++.
T Consensus 363 wSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR------ASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred HHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc------cchhhhhhhhhccccchHHHHHHHHHccC
Confidence 999999999999777653210 00000111111111000 0000000 00001122456899999999
Q ss_pred CCCCCCCHHHHHH
Q 001561 1030 DPRRRPFIEEVVT 1042 (1052)
Q Consensus 1030 dP~~RPs~~evl~ 1042 (1052)
||++|||++|+++
T Consensus 437 dP~kR~ta~e~L~ 449 (566)
T PLN03225 437 KGRQRISAKAALA 449 (566)
T ss_pred CcccCCCHHHHhC
Confidence 9999999999987
No 397
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.9e-30 Score=259.97 Aligned_cols=248 Identities=22% Similarity=0.350 Sum_probs=196.0
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 844 (1052)
..+|+..++||+|+|++|..+++. +.+.+|+|+++++. .+..+-++.|-.+..+. +||.+|-+..+|..+.+.+.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 357899999999999999999865 67889999987643 23334467777777777 69999999999999999999
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
|.||++||+|--++++ .+.++++.++.+..+|.-||.|||+. ||+.||+|.+|||+|.+|++|++|||+++.-
T Consensus 329 vieyv~ggdlmfhmqr----qrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEecCcceeeehhh----hhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC
Confidence 9999999999777764 55699999999999999999999986 9999999999999999999999999999863
Q ss_pred CCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCC-chhHHHHHHHhhhcccccccc
Q 001561 925 RPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKN-CRDLVSWVFQMKSEKREVEII 1003 (1052)
Q Consensus 925 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
-. ....+.+++|||.|.|||++.+..|...+|+|++||+++||+.|+.||+.....+ ..+.-.+.++..-++.+ .+
T Consensus 402 l~-~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi-ri- 478 (593)
T KOG0695|consen 402 LG-PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI-RI- 478 (593)
T ss_pred CC-CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc-cc-
Confidence 32 2334567899999999999999999999999999999999999999997532111 11222223332221111 00
Q ss_pred cccccchhhHHHHHHHHHHHHHcccCCCCCCC
Q 001561 1004 DASIWHKDREKQLLEMLEIACKCIDQDPRRRP 1035 (1052)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1035 (1052)
+...+.++..+++.-+++||++|.
T Consensus 479 --------prslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 479 --------PRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred --------cceeehhhHHHHHHhhcCCcHHhc
Confidence 011122456778888999999985
No 398
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-30 Score=272.37 Aligned_cols=257 Identities=25% Similarity=0.389 Sum_probs=196.0
Q ss_pred hcCCcccCeEcccCceEEEEEE-ECCCcEEEEEEec--CCchhh-----HHHHHHHHHHHHhcCCCceeeeeceEee-CC
Q 001561 770 TNNFNQANIIGCGGFGLVYKAT-LTNGTKAAVKRLS--GDCGQM-----EREFQAEVEALSRAQHKNLVSLQGYCRH-GN 840 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~--~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 840 (1052)
-++|-...+||+|||+.||+|. +...+.||||+-. +.+... .+...+|.++-+.+.||.||++++|+.- .+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 3567788999999999999996 4456778998754 222221 1345789999999999999999999964 46
Q ss_pred eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC---CCCCeEEee
Q 001561 841 DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD---EKFEAHLAD 917 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~---~~~~~kl~D 917 (1052)
.++-|.||++|.+|+-|+.. ...+++.+++.|+.||+.||.||... .++|||-|+||.|||+. .-|.+||+|
T Consensus 542 sFCTVLEYceGNDLDFYLKQ----hklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQ----HKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred cceeeeeecCCCchhHHHHh----hhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeee
Confidence 77899999999999999875 44589999999999999999999986 78999999999999995 458899999
Q ss_pred cccccccCCCCCe------eeecccccccccCccccC----CcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHH
Q 001561 918 FGLSRLLRPYDTH------VTTDLVGTLGYIPPEYSQ----TLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLV 987 (1052)
Q Consensus 918 fG~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~ 987 (1052)
||+++.++.+... .+....||.+|++||.+. ....+.|+||||+|||+|+.+.|+.||+.. ....+++
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn--qsQQdIL 694 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN--QSQQDIL 694 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc--hhHHHHH
Confidence 9999988654321 234568999999999542 345788999999999999999999999632 2222333
Q ss_pred HHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 988 SWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+.-.... . .... .+..+....++.++|++|+++.-++|....++..
T Consensus 695 qeNTIlk-A-tEVq-------FP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 695 QENTILK-A-TEVQ-------FPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred hhhchhc-c-eecc-------CCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 2211111 0 1111 1112233447889999999999999988877654
No 399
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.4e-29 Score=277.02 Aligned_cols=203 Identities=27% Similarity=0.355 Sum_probs=172.9
Q ss_pred cCCcccCeEcccCceEEEEEEE-CCCcEEEEEEecCCchh---hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATL-TNGTKAAVKRLSGDCGQ---MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
.-|..++.||-|+||.|.+++. ++...||.|.+++.+-- ....++.|-++|.....+-||+++..|.+.+.+|.||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 4688899999999999999974 45667899998765422 2234678999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||++||++-.+|.+ .+.+.++.++.++.+++.|+++.|.. |+|||||||+|||||.+|++||+|||+++-+.-
T Consensus 709 dYIPGGDmMSLLIr----mgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW 781 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIR----MGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 781 (1034)
T ss_pred eccCCccHHHHHHH----hccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeecccccccee
Confidence 99999999888874 45688999999999999999999997 999999999999999999999999999864321
Q ss_pred C--------CCe---------------------------------eeecccccccccCccccCCcCCCcccchHHHHHHH
Q 001561 927 Y--------DTH---------------------------------VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVL 965 (1052)
Q Consensus 927 ~--------~~~---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil 965 (1052)
- ..+ .....+||+.|+|||++....++..+|+||.||||
T Consensus 782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil 861 (1034)
T KOG0608|consen 782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL 861 (1034)
T ss_pred ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence 0 000 00123899999999999999999999999999999
Q ss_pred HHHHcCCCCCcccCC
Q 001561 966 LELLTGRRPVEVCKG 980 (1052)
Q Consensus 966 ~elltG~~pf~~~~~ 980 (1052)
|||+.|++||-....
T Consensus 862 ~em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 862 YEMLVGQPPFLADTP 876 (1034)
T ss_pred HHHhhCCCCccCCCC
Confidence 999999999975443
No 400
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=1.6e-28 Score=264.38 Aligned_cols=238 Identities=32% Similarity=0.390 Sum_probs=192.7
Q ss_pred CceEEEEEEEC-CCcEEEEEEecCCchhh-HHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCChhhhhhc
Q 001561 783 GFGLVYKATLT-NGTKAAVKRLSGDCGQM-EREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSLDYWLHE 860 (1052)
Q Consensus 783 ~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 860 (1052)
+||.||+|... +++.+|+|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999987 58999999997654433 67899999999999999999999999999999999999999999998875
Q ss_pred ccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeeeeccccccc
Q 001561 861 SVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTDLVGTLG 940 (1052)
Q Consensus 861 ~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~ 940 (1052)
.. .+++..++.++.+++++++|||+. +++|+||+|+||++++++.++++|||.+....... ......++..
T Consensus 81 ~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~ 151 (244)
T smart00220 81 RG----RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPE 151 (244)
T ss_pred cc----CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcC
Confidence 32 288999999999999999999996 99999999999999999999999999998765432 2334578889
Q ss_pred ccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHH
Q 001561 941 YIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEML 1020 (1052)
Q Consensus 941 y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1020 (1052)
|++||......++.++||||+|+++|++++|..||... .......++..... .... ........++.
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~--~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~ 218 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD--DQLLELFKKIGKPK---PPFP--------PPEWKISPEAK 218 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CcHHHHHHHHhccC---CCCc--------cccccCCHHHH
Confidence 99999988888899999999999999999999998632 11122222111100 0000 00000234788
Q ss_pred HHHHHcccCCCCCCCCHHHHHH
Q 001561 1021 EIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1021 ~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+++.+|+..+|++||++.++++
T Consensus 219 ~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 219 DLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHccCCchhccCHHHHhh
Confidence 9999999999999999999986
No 401
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1e-30 Score=259.36 Aligned_cols=260 Identities=23% Similarity=0.322 Sum_probs=193.7
Q ss_pred ccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC-----CeEEEEE
Q 001561 775 QANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG-----NDRLLIY 846 (1052)
Q Consensus 775 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~ 846 (1052)
-.+.||-|+||.||.+... +|+.||.|++..-. -...+.+.+|.+++..++|.|++..++...-. ++.|+++
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 3578999999999999754 89999999886433 33457799999999999999999998876533 3467888
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
|.|.. +|.+.+- ..+.++.+.+.-+.+||++||+|||+. +|.||||||.|.+++.+..+||||||+|+..+.
T Consensus 137 ELmQS-DLHKIIV----SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 137 ELMQS-DLHKIIV----SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHh-hhhheec----cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccch
Confidence 88843 5555443 567889999999999999999999997 999999999999999999999999999998776
Q ss_pred CCCeeeecccccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHH------------Hh
Q 001561 927 YDTHVTTDLVGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVF------------QM 993 (1052)
Q Consensus 927 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~------------~~ 993 (1052)
.+...++..+-|..|+|||++++. .|+.+.||||.|||+.|++..+.-|+...+-+..+++.... +.
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 666666677889999999987764 68899999999999999999888886543322222221111 00
Q ss_pred hhc---ccccccccccccc--hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 994 KSE---KREVEIIDASIWH--KDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 994 ~~~---~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+. +......+-.... ......-.+...+..+++.+||++|.+..+.+.
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~ 342 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQ 342 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcc
Confidence 000 0000001100000 011122235678888999999999999998876
No 402
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-29 Score=285.78 Aligned_cols=245 Identities=25% Similarity=0.345 Sum_probs=186.8
Q ss_pred cccCeEcccCceE-EEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 774 NQANIIGCGGFGL-VYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 774 ~~~~~lG~G~~g~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
.-.+++|.|+.|+ ||+|... |+.||||++-.+. ..-.++|+..++.- .|||||++++.-.+....|+..|.|.
T Consensus 512 ~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~- 586 (903)
T KOG1027|consen 512 SPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA- 586 (903)
T ss_pred ccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-
Confidence 3346789998884 6999886 8899999986432 34568899999988 59999999999888999999999994
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC-----CCCeEEeecccccccCC
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE-----KFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~-----~~~~kl~DfG~a~~~~~ 926 (1052)
.+|+++++..............+.+..|+++||+|||+. +|||||+||+||||+. ..+++|+|||+++.+..
T Consensus 587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 589999986411111112245578889999999999997 9999999999999975 25799999999999876
Q ss_pred CCCee--eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcC-CCCCcccCCCCchhHHHHHHHhhhcccccccc
Q 001561 927 YDTHV--TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTG-RRPVEVCKGKNCRDLVSWVFQMKSEKREVEII 1003 (1052)
Q Consensus 927 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
..... .....||-+|+|||++....-+.++||||+||++|+.++| ..||+.....+ ...........-+
T Consensus 664 ~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--------~NIl~~~~~L~~L 735 (903)
T KOG1027|consen 664 GKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--------ANILTGNYTLVHL 735 (903)
T ss_pred CcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--------hhhhcCccceeee
Confidence 54433 2356899999999999998889999999999999999985 99997421110 1111111111000
Q ss_pred cccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1004 DASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1004 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.+ ..++ ++.+||.+|++++|..||++.+|+.
T Consensus 736 ~~------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 736 EP------LPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred cc------CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 00 1111 6889999999999999999999975
No 403
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=1.2e-28 Score=239.25 Aligned_cols=257 Identities=20% Similarity=0.309 Sum_probs=193.2
Q ss_pred hcCCcccCeEcccCceEEEEEE-ECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcC-CCceeeeeceEeeCC--eEEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKAT-LTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGN--DRLLI 845 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~~lv 845 (1052)
.++|++.+.+|+|.|+.||.|. ..+.++++||+++ +...+.+.+|+.++..++ ||||+++++...++. ...+|
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLK---PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILK---PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeec---hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 4678899999999999999997 4578899999987 344567899999999996 999999999998764 45799
Q ss_pred EEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC-CCCeEEeeccccccc
Q 001561 846 YSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE-KFEAHLADFGLSRLL 924 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~-~~~~kl~DfG~a~~~ 924 (1052)
+||+++.+....-. .++..++..++.+++.||.|+|+. ||+|||+||.|+|+|. ...++++|+|+|.++
T Consensus 114 FE~v~n~Dfk~ly~-------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY 183 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYP-------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 183 (338)
T ss_pred hhhhccccHHHHhh-------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhc
Confidence 99999887655433 367788899999999999999997 9999999999999995 467999999999998
Q ss_pred CCCCCeeeecccccccccCccccCC-cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhh--------
Q 001561 925 RPYDTHVTTDLVGTLGYIPPEYSQT-LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKS-------- 995 (1052)
Q Consensus 925 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~-------- 995 (1052)
.+.... .-.+.+..|--||.+-. ..|+..-|+|||||++..|+..+.||-... ++.+.++.-..-...
T Consensus 184 Hp~~eY--nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~-dN~DQLVkIakVLGt~el~~Yl~ 260 (338)
T KOG0668|consen 184 HPGKEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH-DNYDQLVKIAKVLGTDELYAYLN 260 (338)
T ss_pred CCCcee--eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCC-CCHHHHHHHHHHhChHHHHHHHH
Confidence 764332 22356778899997654 568889999999999999999999985322 222233221111000
Q ss_pred ------ccccccccc---ccccchh-----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 996 ------EKREVEIID---ASIWHKD-----REKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 996 ------~~~~~~~~~---~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
......++. ...|..+ ..-...++.+++.+.+..|..+|||++|++.
T Consensus 261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 000001000 0111111 0112357899999999999999999999986
No 404
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-26 Score=247.37 Aligned_cols=283 Identities=22% Similarity=0.354 Sum_probs=203.4
Q ss_pred cCCCCccccHHHHHHhhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcC-----C-
Q 001561 754 QNSDCKDLTVSDLLKSTNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQ-----H- 826 (1052)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h- 826 (1052)
..+.+....+.|... .++|.+.++||.|.|++||+|... +.+.||+|+.+.. ..-.+....|++++++++ |
T Consensus 62 ~kGGYHpV~IGD~F~-~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~ 139 (590)
T KOG1290|consen 62 RKGGYHPVRIGDVFN-GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDP 139 (590)
T ss_pred hcCCCceeecccccc-CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 344455555666543 367999999999999999999754 5678999988754 444556788999999984 3
Q ss_pred --CceeeeeceEee----CCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC
Q 001561 827 --KNLVSLQGYCRH----GNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDV 900 (1052)
Q Consensus 827 --~niv~l~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDl 900 (1052)
..||+++++|.. +.+.+||+|++ |-+|-.++.... -+.++...+.+|++||+.||.|||+.| +|||-||
T Consensus 140 ~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~--YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDl 214 (590)
T KOG1290|consen 140 GKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSN--YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDL 214 (590)
T ss_pred CCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhC--CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCC
Confidence 369999999975 46889999999 668888887653 345788899999999999999999975 9999999
Q ss_pred CCCceEECCC-----------C----------------------------------------------------------
Q 001561 901 KSSNILLDEK-----------F---------------------------------------------------------- 911 (1052)
Q Consensus 901 kp~Nill~~~-----------~---------------------------------------------------------- 911 (1052)
||+|||+..+ +
T Consensus 215 KPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~ 294 (590)
T KOG1290|consen 215 KPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGI 294 (590)
T ss_pred CcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccc
Confidence 9999998211 0
Q ss_pred --------------------------------------------------------------------------------
Q 001561 912 -------------------------------------------------------------------------------- 911 (1052)
Q Consensus 912 -------------------------------------------------------------------------------- 911 (1052)
T Consensus 295 ~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~ 374 (590)
T KOG1290|consen 295 EEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTI 374 (590)
T ss_pred cccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCcccc
Confidence
Q ss_pred -----------------CeEEeecccccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCC
Q 001561 912 -----------------EAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRP 974 (1052)
Q Consensus 912 -----------------~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~p 974 (1052)
++||+|||-|..+.. ..+.-+.|..|+|||++.+..|++.+||||++|++|||+||..-
T Consensus 375 ~~n~~v~p~~~~~~~di~vKIaDlGNACW~~k----hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyL 450 (590)
T KOG1290|consen 375 ASNPLVNPDIPLPECDIRVKIADLGNACWVHK----HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYL 450 (590)
T ss_pred ccccccCCCCCCCccceeEEEeeccchhhhhh----hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCcee
Confidence 011222222221100 01112578899999999999999999999999999999999999
Q ss_pred CcccCCCC---chhHHHHHHHhhhc---------ccccccccc----------ccc---------chhhHHHHHHHHHHH
Q 001561 975 VEVCKGKN---CRDLVSWVFQMKSE---------KREVEIIDA----------SIW---------HKDREKQLLEMLEIA 1023 (1052)
Q Consensus 975 f~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~~~----------~~~---------~~~~~~~~~~l~~li 1023 (1052)
|+...+.+ +++.+..+...... ....++++. ..| ..++.+...++.+++
T Consensus 451 FePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL 530 (590)
T KOG1290|consen 451 FEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFL 530 (590)
T ss_pred ecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHH
Confidence 98654332 23334333332221 111122211 111 123566778999999
Q ss_pred HHcccCCCCCCCCHHHHHH--HHhhc
Q 001561 1024 CKCIDQDPRRRPFIEEVVT--WLDGI 1047 (1052)
Q Consensus 1024 ~~cl~~dP~~RPs~~evl~--~L~~i 1047 (1052)
.-|++.+|++|||+.+.++ ||..+
T Consensus 531 ~PmLef~PeKR~tA~~cl~hPwLn~~ 556 (590)
T KOG1290|consen 531 SPMLEFDPEKRPTAAQCLKHPWLNPV 556 (590)
T ss_pred HHHHhcCccccccHHHHhcCccccCC
Confidence 9999999999999999996 66644
No 405
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=1.5e-27 Score=259.77 Aligned_cols=197 Identities=20% Similarity=0.273 Sum_probs=167.5
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchh--------hHHHHHHHHHHHHhcC---CCceeeeeceEe
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQ--------MEREFQAEVEALSRAQ---HKNLVSLQGYCR 837 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~---h~niv~l~~~~~ 837 (1052)
..+|...+.+|.|+||.|+.|.++ +...|+||.+.++..- .--.+-.|+.+|..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 346888999999999999999876 4567899988765311 0112456999999997 999999999999
Q ss_pred eCCeEEEEEEecc-CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEe
Q 001561 838 HGNDRLLIYSYME-NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLA 916 (1052)
Q Consensus 838 ~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~ 916 (1052)
+++.+|++||... +-+|.+++.. ...+++.++..|+.||+.|+++||++ +|||||||-+||.++.+|-+|++
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~----kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~kli 712 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEF----KPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLI 712 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhc----cCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEe
Confidence 9999999999764 5588888874 45589999999999999999999997 99999999999999999999999
Q ss_pred ecccccccCCCCCeeeecccccccccCccccCCcCCC-cccchHHHHHHHHHHHcCCCCCc
Q 001561 917 DFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTAT-CRGDVYSFGVVLLELLTGRRPVE 976 (1052)
Q Consensus 917 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~elltG~~pf~ 976 (1052)
|||.|...... ....++||.+|.|||++.+..|- ..-|||++|+++|.++....||.
T Consensus 713 dfgsaa~~ksg---pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 713 DFGSAAYTKSG---PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eccchhhhcCC---CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99999765432 23446899999999999998875 55799999999999999998874
No 406
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=8.5e-28 Score=266.16 Aligned_cols=252 Identities=25% Similarity=0.342 Sum_probs=204.4
Q ss_pred hcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
..+|+....+|.|.||.||||+.. +++.+|+|+++-+......-++.|+-+++..+|||||.+++.+...+..|++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 457888999999999999999854 7899999999987777777788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYD 928 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 928 (1052)
+.+|+|++.-+ ...++++.+...+.++..+|++|||+. +=+|||||-.||++++.|.+|++|||.+..+...-
T Consensus 94 cgggslQdiy~----~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati 166 (829)
T KOG0576|consen 94 CGGGSLQDIYH----VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATI 166 (829)
T ss_pred cCCCcccceee----ecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhh
Confidence 99999988665 466799999999999999999999997 88999999999999999999999999998775432
Q ss_pred CeeeecccccccccCcccc---CCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHH-hhhccccccccc
Q 001561 929 THVTTDLVGTLGYIPPEYS---QTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQ-MKSEKREVEIID 1004 (1052)
Q Consensus 929 ~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 1004 (1052)
.....+.||+.|||||+. ..+.|...+|||+.|+...|+-.-++|.-.. .-.+..+- .++.......-|
T Consensus 167 -~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl------hpmr~l~LmTkS~~qpp~lkD 239 (829)
T KOG0576|consen 167 -AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL------HPMRALFLMTKSGFQPPTLKD 239 (829)
T ss_pred -hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc------chHHHHHHhhccCCCCCcccC
Confidence 223457999999999953 4667899999999999999998888874210 01111111 111122222223
Q ss_pred ccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 1005 ASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1005 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+.. +...+-++++.|+-++|++||+++.+++
T Consensus 240 k~k-------ws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 240 KTK-------WSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred Ccc-------chHHHHHHHHHHhcCCCccCCChhhhee
Confidence 332 3446789999999999999999987764
No 407
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=8.3e-26 Score=237.21 Aligned_cols=210 Identities=37% Similarity=0.579 Sum_probs=183.3
Q ss_pred EcccCceEEEEEEEC-CCcEEEEEEecCCchh-hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCChhh
Q 001561 779 IGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQ-MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSLDY 856 (1052)
Q Consensus 779 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 856 (1052)
||+|.+|.||++... +++.+++|++...... ..+.+.+|++.+++++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999876 4899999998865432 34678999999999999999999999999899999999999999999
Q ss_pred hhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC-CCCeEEeecccccccCCCCCeeeecc
Q 001561 857 WLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE-KFEAHLADFGLSRLLRPYDTHVTTDL 935 (1052)
Q Consensus 857 ~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~-~~~~kl~DfG~a~~~~~~~~~~~~~~ 935 (1052)
++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++++|||.+........ .....
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~ 153 (215)
T cd00180 81 LLKENE---GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTI 153 (215)
T ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcc
Confidence 987531 4588999999999999999999986 9999999999999999 89999999999987654321 12334
Q ss_pred cccccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHH
Q 001561 936 VGTLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREK 1014 (1052)
Q Consensus 936 ~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1052)
.+...|++||..... .++.++|+|++|++++++
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------- 187 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------- 187 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------
Confidence 678899999988777 788999999999999999
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001561 1015 QLLEMLEIACKCIDQDPRRRPFIEEVVTW 1043 (1052)
Q Consensus 1015 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1043 (1052)
..+.+++.+|++.+|.+||++.++++.
T Consensus 188 --~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 --PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred --HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 368899999999999999999999864
No 408
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=2.9e-27 Score=241.73 Aligned_cols=259 Identities=22% Similarity=0.260 Sum_probs=192.2
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcCCCceeeeeceEeeC------Ce
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQHKNLVSLQGYCRHG------ND 841 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 841 (1052)
.+|...+.+|.|.- .|..|... .+++||+|+..... ....+...+|...+..++|+||++++.++.-. .+
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46777888999988 66666543 68899999876442 33446678999999999999999999998532 46
Q ss_pred EEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccc
Q 001561 842 RLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLS 921 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a 921 (1052)
.|+|||+|. ++|...++- .++.++...+..|++.|++|||+. +|+||||||+||++..++.+||.|||+|
T Consensus 96 ~y~v~e~m~-~nl~~vi~~------elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 96 VYLVMELMD-ANLCQVILM------ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred HHHHHHhhh-hHHHHHHHH------hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhh
Confidence 799999995 477777662 367788899999999999999997 9999999999999999999999999999
Q ss_pred cccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccC------------CCCchhHHHH
Q 001561 922 RLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCK------------GKNCRDLVSW 989 (1052)
Q Consensus 922 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~------------~~~~~~~~~~ 989 (1052)
+.-+.. ...++++.|..|.|||++-+..+.+.+||||.||++.||++|+.-|.+.. +..+......
T Consensus 166 r~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 166 RTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred cccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 865432 46678899999999999988889999999999999999999999885311 0011111111
Q ss_pred HHHhh----hc------ccccccccccccchh---hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 990 VFQMK----SE------KREVEIIDASIWHKD---REKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 990 ~~~~~----~~------~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+.... .. ....+.+....+... .......+.+++.+|+..+|++|.+++++++
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 00000 00 000011111111110 1122346789999999999999999999986
No 409
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=2.7e-25 Score=236.42 Aligned_cols=198 Identities=32% Similarity=0.443 Sum_probs=172.5
Q ss_pred CcccCeEcccCceEEEEEEECC-CcEEEEEEecCCchh-hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEecc
Q 001561 773 FNQANIIGCGGFGLVYKATLTN-GTKAAVKRLSGDCGQ-MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
|+..+.||.|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++...+..++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5567899999999999998774 889999999866544 56788999999999999999999999999899999999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+++|.+++.... ..+++..+..++.+++.++.|||+. +++|+|++|+||+++.++.++++|||.+.........
T Consensus 81 ~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 81 GGDLFDYLRKKG---GKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred CCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence 999999987532 1178999999999999999999986 9999999999999999999999999999876543211
Q ss_pred eeecccccccccCcccc-CCcCCCcccchHHHHHHHHHHHcCCCCCc
Q 001561 931 VTTDLVGTLGYIPPEYS-QTLTATCRGDVYSFGVVLLELLTGRRPVE 976 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslGvil~elltG~~pf~ 976 (1052)
......++..|++||.. ....++.++|||+||++++||++|+.||.
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 22345678899999988 66778889999999999999999999995
No 410
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=3.1e-26 Score=246.34 Aligned_cols=270 Identities=21% Similarity=0.273 Sum_probs=204.7
Q ss_pred ccccHHHHHHhhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcC------CCceee
Q 001561 759 KDLTVSDLLKSTNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQ------HKNLVS 831 (1052)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~ 831 (1052)
..+.+.++. ..+|.+....|+|-|++|..|... .|..||||++... ....+.=..|+++|+++. --++++
T Consensus 422 Yrv~igE~L--D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclr 498 (752)
T KOG0670|consen 422 YRVRIGELL--DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLR 498 (752)
T ss_pred EEEehhhhh--cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHH
Confidence 334455544 457999999999999999999755 5789999999854 333444578999999995 237999
Q ss_pred eeceEeeCCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCC-
Q 001561 832 LQGYCRHGNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEK- 910 (1052)
Q Consensus 832 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~- 910 (1052)
++-.|.+.++++||||-+ .-+|.+.+..+. ....+....+..++.|+.-||..|-.. +|+|.||||.|||+++.
T Consensus 499 l~r~F~hknHLClVFE~L-slNLRevLKKyG-~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k 573 (752)
T KOG0670|consen 499 LFRHFKHKNHLCLVFEPL-SLNLREVLKKYG-RNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESK 573 (752)
T ss_pred HHHHhhhcceeEEEehhh-hchHHHHHHHhC-cccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCc
Confidence 999999999999999977 458888887654 445578889999999999999999987 99999999999999965
Q ss_pred CCeEEeecccccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHH
Q 001561 911 FEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWV 990 (1052)
Q Consensus 911 ~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~ 990 (1052)
..+||||||.|.+.... ..+++.-+..|.|||++.+.+|+...|+||.||+|||+.||+.-|.+.... +.+...
T Consensus 574 ~iLKLCDfGSA~~~~en---eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN---~MLrl~ 647 (752)
T KOG0670|consen 574 NILKLCDFGSASFASEN---EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN---QMLRLF 647 (752)
T ss_pred ceeeeccCccccccccc---cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH---HHHHHH
Confidence 56899999999876532 234556677899999999999999999999999999999999998643211 111111
Q ss_pred HHhhhc--------------------------------cc---ccccccc-----------cccchhhHHHHHHHHHHHH
Q 001561 991 FQMKSE--------------------------------KR---EVEIIDA-----------SIWHKDREKQLLEMLEIAC 1024 (1052)
Q Consensus 991 ~~~~~~--------------------------------~~---~~~~~~~-----------~~~~~~~~~~~~~l~~li~ 1024 (1052)
...++. .. ....+.+ .-..........++.+|+.
T Consensus 648 me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLd 727 (752)
T KOG0670|consen 648 MELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLD 727 (752)
T ss_pred HHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHH
Confidence 111100 00 0000111 0011223445668899999
Q ss_pred HcccCCCCCCCCHHHHHH
Q 001561 1025 KCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1025 ~cl~~dP~~RPs~~evl~ 1042 (1052)
+|+..||++|.|..|+++
T Consensus 728 kml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 728 KMLILDPEKRITVNQALK 745 (752)
T ss_pred HHhccChhhcCCHHHHhc
Confidence 999999999999999875
No 411
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=2.3e-27 Score=248.10 Aligned_cols=417 Identities=23% Similarity=0.253 Sum_probs=299.1
Q ss_pred eeeccCcccccccccCCCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEccC-Cc
Q 001561 210 ILDLSMNHFMGSLQGLDHSPSLKQLHVDNNLLGGDLPDSLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFG-NQ 288 (1052)
Q Consensus 210 ~L~Ls~n~l~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~ 288 (1052)
..+-++-.++.+|..+ .+.-.+++|+.|+|+.+.|.+|+.+++|+.||||+|+|+.+.|.+|.++.+|..|-+.+ |+
T Consensus 50 ~VdCr~~GL~eVP~~L--P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 50 IVDCRGKGLTEVPANL--PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred eEEccCCCcccCcccC--CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 4556666677777666 46788999999999999899999999999999999999999999999999998887777 99
Q ss_pred CCCCCcccccCccccccccccCCcccCCCCcccccCCCCcEEEecCccccCcCCcccccCCccceeeccccccc------
Q 001561 289 FSGKLPNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFS------ 362 (1052)
Q Consensus 289 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~------ 362 (1052)
|+...-..|++|..|+.|.+.-|++.-.....|..+++|..|.+..|.+..+....|..+.+++.+.+..|.+-
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~ 207 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLP 207 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccc
Confidence 99777788999999999999999999888899999999999999999999777778999999999999998832
Q ss_pred ------CCCCccccCCCccceeecccccccccCchhhccCCcCcEE--eccCCcCCCCcccchhhccCcccceEeccccc
Q 001561 363 ------GPLPNSLSDCHDLKILSLAKNELSGQVPESFGKLTSLLFL--SLSNNSFNHLSGTLSVLQQCKNLTTLILTKNF 434 (1052)
Q Consensus 363 ------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L--~L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N~ 434 (1052)
...|..++...-..-..+.++++..+.+..|... ++.+ .++.+-+-..+.....|..+++|+.|+|++|.
T Consensus 208 wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~--~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~ 285 (498)
T KOG4237|consen 208 WLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCS--LESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNK 285 (498)
T ss_pred hhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhh--HHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCc
Confidence 2234445555555556666677765555544332 2222 22333222223334568888999999999999
Q ss_pred cCccCCccccCCCcccEEEccCCccccCcchhhhcCCCCcEEeCcCccCCCCCChhhccCCCCCeEeccCCcccccCCcc
Q 001561 435 VGEEIPENVGGFESLMVLALGNCGLKGHIPVWLLRCKKLQVLDLSWNHFDGNIPPWIGQMENLFYLDFSNNTLTGEIPKS 514 (1052)
Q Consensus 435 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 514 (1052)
++.+-+.+|.++..++.|.|..|+|...-...|.++..|+.|+|++|+|+..-|..|..+..|..|+|-.|.+--. -.
T Consensus 286 i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~Cn--C~ 363 (498)
T KOG4237|consen 286 ITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCN--CR 363 (498)
T ss_pred cchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCc--cc
Confidence 9888888999999999999999998866677888899999999999999888888888899999999988886521 01
Q ss_pred hhhh-hhhcccCCCCC----CCCCCCCcccee-eccccCCC----cCCCCCCC-------CCCeeeeecCcccccCCccc
Q 001561 515 LTEL-KSLISSNCTSS----NPTASAGIPLYV-KHNRSTNG----LPYNQASS-------FPPSVFLSNNRINGTIPPEI 577 (1052)
Q Consensus 515 ~~~l-~~L~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~----l~~~~~~~-------~~~~l~Ls~N~l~g~ip~~~ 577 (1052)
+..| ..|........ .+....++++.- .+....-+ ..-..... ..+.+..|++.+. .+|.-+
T Consensus 364 l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~i 442 (498)
T KOG4237|consen 364 LAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGI 442 (498)
T ss_pred hHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCC
Confidence 1111 11211111110 111122222210 01110000 00000000 1112233444443 666654
Q ss_pred ccccccceecccCceeeecCCCCcccccCcCeeeCCCCcCCCCCCccccCccccCeeeeccc
Q 001561 578 GQLKHLHVLDLSRNNITGTIPSSISEIRNLEVLDLSSNDLHGSIPGSFEKLTFLSKFSVANN 639 (1052)
Q Consensus 578 ~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~l~l~~N 639 (1052)
- ..-..|+|.+|+++ .+|.+ .+.+| .+|||+|+++..--..|.+++.|.+|-+|+|
T Consensus 443 P--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 443 P--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred C--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 3 35678999999999 88888 78888 9999999999777778999999999999987
No 412
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=4.7e-27 Score=245.81 Aligned_cols=288 Identities=20% Similarity=0.223 Sum_probs=190.3
Q ss_pred eeeCCCCC----CCCCCcEEEEEecCCCCcccCCccccCCcCCCeEecCCCCCCCCCcccccCCCCccEEeccC-CcccC
Q 001561 74 VVCGHGST----GSNAGRVTMLILPRKGLKGIIPRSLGHLNQLKLLDLSCNHLEGVVPVELSNLKQLEVLDLSH-NMLSG 148 (1052)
Q Consensus 74 v~C~~~~~----~~~~~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~Ls~n~i~~~~p~~l~~l~~L~~L~Ls~-N~l~~ 148 (1052)
|.|+..+. ...+...+.|+|..|+|+.+.+.+|+.+++|++||||+|+|+.+-|.+|..+.+|..|-+-+ |+|+.
T Consensus 51 VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~ 130 (498)
T KOG4237|consen 51 VDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITD 130 (498)
T ss_pred EEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhh
Confidence 67765443 24667889999999999999999999999999999999999999999999999987776655 99999
Q ss_pred cccccccccCCccEEEccCcccCCcc-cccccCCcccEEEecCCccCCccchhhhhcccccceeeccCcccc--------
Q 001561 149 PVSGMLAGLNLIQSLNVSSNSFNGSL-FELGEFSNLAVFNISNNSFTGKLNSRIWSASKEIQILDLSMNHFM-------- 219 (1052)
Q Consensus 149 ~~~~~l~~l~~L~~L~Ls~N~l~~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~Ls~n~l~-------- 219 (1052)
+..+.|++|..|+.|.+.-|++.... ..+..+++|..|.+..|.+. .++...|..+..++.+.+..|.+.
T Consensus 131 l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wl 209 (498)
T KOG4237|consen 131 LPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWL 209 (498)
T ss_pred hhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchh
Confidence 99999999999999999999887655 34566677777777777666 556666666666666666666531
Q ss_pred -----cccccCCCCCCCCEEEcccccCCCCCCccccCC-CCCcEEEcccCcCCchhh-hhhcCCCCCcEEEccCCcCCCC
Q 001561 220 -----GSLQGLDHSPSLKQLHVDNNLLGGDLPDSLYSM-SSLQHVSLSVNNFSGQLS-EKISNLTSLRHLIIFGNQFSGK 292 (1052)
Q Consensus 220 -----~~~~~l~~~~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~ 292 (1052)
..+..+++..-..-..+.++++..+.+..|... ..+..=..+.+...+..| ..|..|++|+.|+|++|+|+++
T Consensus 210 a~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i 289 (498)
T KOG4237|consen 210 ADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRI 289 (498)
T ss_pred hhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchh
Confidence 111223333333344444444443333333221 111111111222222322 4566666666666666666666
Q ss_pred CcccccCccccccccccCCcccCCCCcccccCCCCcEEEecCccccCcCCcccccCCccceeeccccccc
Q 001561 293 LPNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFS 362 (1052)
Q Consensus 293 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 362 (1052)
-+.+|..+..+++|+|..|++...-...|.++..|+.|+|++|+|+...|.+|..+.+|.+|+|-.|.+.
T Consensus 290 ~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 290 EDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred hhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 6666666666666666666666555555666666666666666666666666666666666666665543
No 413
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.5e-25 Score=221.72 Aligned_cols=251 Identities=19% Similarity=0.278 Sum_probs=185.8
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhc-CCCceeeeece-EeeCCeEEEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRA-QHKNLVSLQGY-CRHGNDRLLIYS 847 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~-~~~~~~~~lv~e 847 (1052)
+.|.+.+.+|+|.||.+-.+.++ +.+.+|+|.+.... ...++|.+|...--.+ .|.||+.-++. |+..+.++.++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 35888899999999999999876 56789999887553 3456788888764445 59999998885 556677789999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC--CCCCeEEeecccccccC
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD--EKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~--~~~~~kl~DfG~a~~~~ 925 (1052)
|++.|+|.+-+.. ..+.+....+++.|+++|+.|||+. .+||||||.+|||+- +..++|+||||..+..+
T Consensus 103 ~aP~gdL~snv~~-----~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 103 FAPRGDLRSNVEA-----AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred cCccchhhhhcCc-----ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccC
Confidence 9999999887753 4477888899999999999999985 999999999999994 34579999999998654
Q ss_pred CCCCeeeecccccccccCccccCC-----cCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQT-----LTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
.-.. ..--+..|.|||.... ....+.+|||.||+++|.++||+.||+.. ...+..+++|.....+...
T Consensus 175 ~tV~----~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka-~~~d~~Y~~~~~w~~rk~~-- 247 (378)
T KOG1345|consen 175 TTVK----YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA-SIMDKPYWEWEQWLKRKNP-- 247 (378)
T ss_pred ceeh----hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhh-hccCchHHHHHHHhcccCc--
Confidence 3211 1223557999996432 24567899999999999999999999832 2334455666544333322
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTW 1043 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1043 (1052)
...+ .... ....++++.++-+.++|++|-...++.++
T Consensus 248 ~~P~--~F~~----fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 248 ALPK--KFNP----FSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred cCch--hhcc----cCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 1111 1111 22367888999999999999655555543
No 414
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=2.3e-25 Score=236.97 Aligned_cols=203 Identities=31% Similarity=0.416 Sum_probs=167.5
Q ss_pred HHHHHhhcCCcccCeEcccCceEEEEEEEC----CCcEEEEEEecCCchhhHHHHHHHHHHHHhc-CCCceeeeeceEee
Q 001561 764 SDLLKSTNNFNQANIIGCGGFGLVYKATLT----NGTKAAVKRLSGDCGQMEREFQAEVEALSRA-QHKNLVSLQGYCRH 838 (1052)
Q Consensus 764 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 838 (1052)
.++....+.|...++||+|.|++||+|... ..+.||+|.+..... ...+..|++++..+ .+.||+++.+++..
T Consensus 29 q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 29 QDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 344555678999999999999999999743 467899998865432 34588999999999 59999999999999
Q ss_pred CCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC-CCCCeEEee
Q 001561 839 GNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD-EKFEAHLAD 917 (1052)
Q Consensus 839 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~-~~~~~kl~D 917 (1052)
.+...+|+||++.....++... ++..++..+++.+..||+++|.. |||||||||+|++.+ ..+.-.|.|
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvD 176 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVD 176 (418)
T ss_pred CCeeEEEecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEe
Confidence 9999999999999988887764 56788999999999999999986 999999999999998 457789999
Q ss_pred cccccccCCCC-------------C------------------------------eeeecccccccccCccccCC-cCCC
Q 001561 918 FGLSRLLRPYD-------------T------------------------------HVTTDLVGTLGYIPPEYSQT-LTAT 953 (1052)
Q Consensus 918 fG~a~~~~~~~-------------~------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~ 953 (1052)
||+|..++.+. . ......+||+||+|||++.. ..-+
T Consensus 177 FgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qt 256 (418)
T KOG1167|consen 177 FGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQT 256 (418)
T ss_pred chhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcC
Confidence 99998321100 0 00112379999999997665 4578
Q ss_pred cccchHHHHHHHHHHHcCCCCCccc
Q 001561 954 CRGDVYSFGVVLLELLTGRRPVEVC 978 (1052)
Q Consensus 954 ~~~DvwslGvil~elltG~~pf~~~ 978 (1052)
+++||||.|||+.-+++++.||-..
T Consensus 257 taiDiws~GVI~Lslls~~~PFf~a 281 (418)
T KOG1167|consen 257 TAIDIWSAGVILLSLLSRRYPFFKA 281 (418)
T ss_pred CccceeeccceeehhhccccccccC
Confidence 8999999999999999999999643
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.6e-23 Score=270.55 Aligned_cols=272 Identities=21% Similarity=0.264 Sum_probs=130.2
Q ss_pred hhhhhcccccceeeccCcccc-------cccccCCCC-CCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCCchhh
Q 001561 199 SRIWSASKEIQILDLSMNHFM-------GSLQGLDHS-PSLKQLHVDNNLLGGDLPDSLYSMSSLQHVSLSVNNFSGQLS 270 (1052)
Q Consensus 199 ~~~~~~~~~L~~L~Ls~n~l~-------~~~~~l~~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 270 (1052)
...|..+.+|+.|.+..+... ..+.++..+ ++|+.|++.+|.+. .+|..| ...+|++|+|++|++. .++
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccc
Confidence 334455555555555443211 122333332 23555555555544 334443 2345555555555544 334
Q ss_pred hhhcCCCCCcEEEccCCcCCCCCcccccCccccccccccCCcccCCCCcccccCCCCcEEEecCccccCcCCcccccCCc
Q 001561 271 EKISNLTSLRHLIIFGNQFSGKLPNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSGLSS 350 (1052)
Q Consensus 271 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 350 (1052)
..+..+++|+.|+|++|.....+|. ++ .+++|+.|+|++|.....+|..+.++++
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls------------------------~l~~Le~L~L~~c~~L~~lp~si~~L~~ 682 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIPD-LS------------------------MATNLETLKLSDCSSLVELPSSIQYLNK 682 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCCc-cc------------------------cCCcccEEEecCCCCccccchhhhccCC
Confidence 4444455555555554432223332 44 4444555555444433344444444555
Q ss_pred cceeecccccccCCCCccccCCCccceeecccccccccCchhhccCCcCcEEeccCCcCCCCcccchhhccCcccceEec
Q 001561 351 LCTLDLATNHFSGPLPNSLSDCHDLKILSLAKNELSGQVPESFGKLTSLLFLSLSNNSFNHLSGTLSVLQQCKNLTTLIL 430 (1052)
Q Consensus 351 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~l~~L~~L~L 430 (1052)
|+.|++++|..-..+|..+ ++++|+.|++++|...+.+|.. .++|+.|+|++|.+..+|..+ .+++|++|.+
T Consensus 683 L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~lP~~~----~l~~L~~L~l 754 (1153)
T PLN03210 683 LEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEFPSNL----RLENLDELIL 754 (1153)
T ss_pred CCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccccccccc----cccccccccc
Confidence 5555555443222344333 4455555555555433333322 234555555555555544322 2344555544
Q ss_pred cccccC-------ccCCccccCCCcccEEEccCCccccCcchhhhcCCCCcEEeCcCccCCCCCChhhccCCCCCeEecc
Q 001561 431 TKNFVG-------EEIPENVGGFESLMVLALGNCGLKGHIPVWLLRCKKLQVLDLSWNHFDGNIPPWIGQMENLFYLDFS 503 (1052)
Q Consensus 431 ~~N~l~-------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 503 (1052)
.++... ...+......++|+.|+|++|...+.+|..++++++|+.|+|++|...+.+|..+ ++++|+.|+|+
T Consensus 755 ~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls 833 (1153)
T PLN03210 755 CEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLS 833 (1153)
T ss_pred cccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECC
Confidence 442211 1111122234566666676666665666666667777777776665444566544 56666777766
Q ss_pred CCcc
Q 001561 504 NNTL 507 (1052)
Q Consensus 504 ~N~l 507 (1052)
+|..
T Consensus 834 ~c~~ 837 (1153)
T PLN03210 834 GCSR 837 (1153)
T ss_pred CCCc
Confidence 6643
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=5.5e-23 Score=265.68 Aligned_cols=337 Identities=18% Similarity=0.205 Sum_probs=227.3
Q ss_pred ccccccCCccEEEccCcccCC-------cccccccC-CcccEEEecCCccCCccchhhhhcccccceeeccCcccccccc
Q 001561 152 GMLAGLNLIQSLNVSSNSFNG-------SLFELGEF-SNLAVFNISNNSFTGKLNSRIWSASKEIQILDLSMNHFMGSLQ 223 (1052)
Q Consensus 152 ~~l~~l~~L~~L~Ls~N~l~~-------~~~~l~~l-~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~ 223 (1052)
..|.++.+|+.|.+.++.... .+..+..+ .+|+.|++.++.+. .+|..+ ...+|+.|++++|++..++.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f--~~~~L~~L~L~~s~l~~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF--RPENLVKLQMQGSKLEKLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC--CccCCcEEECcCcccccccc
Confidence 345555666666655443211 11223333 34666666666665 444433 34667777777777777777
Q ss_pred cCCCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEccCCcCCCCCcccccCcccc
Q 001561 224 GLDHSPSLKQLHVDNNLLGGDLPDSLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFGNQFSGKLPNVLGNLTQL 303 (1052)
Q Consensus 224 ~l~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 303 (1052)
++..+++|+.|+|++|.....+| .+..+++|++|+|++|.....+|..+.++++|+.|++++|..-+.+|..+ ++++|
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL 706 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSL 706 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCC
Confidence 77777778888887765444555 36677778888887776555777777777888888887765444666554 67777
Q ss_pred ccccccCCcccCCCCcccccCCCCcEEEecCccccCcCCcccccCCccceeecccccc-------cCCCCccccCCCccc
Q 001561 304 EFFVAHSNSFSGPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHF-------SGPLPNSLSDCHDLK 376 (1052)
Q Consensus 304 ~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-------~~~~p~~~~~l~~L~ 376 (1052)
+.|++++|.....+|.. ..+|++|++++|.+.. +|..+ .+++|+.|++.++.. ....|..+...++|+
T Consensus 707 ~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~-lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~ 781 (1153)
T PLN03210 707 YRLNLSGCSRLKSFPDI---STNISWLDLDETAIEE-FPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLT 781 (1153)
T ss_pred CEEeCCCCCCccccccc---cCCcCeeecCCCcccc-ccccc-cccccccccccccchhhccccccccchhhhhccccch
Confidence 77777777655455532 3567788888887764 33333 467777777766432 111222233456788
Q ss_pred eeecccccccccCchhhccCCcCcEEeccCC-cCCCCcccchhhccCcccceEeccccccCccCCccccCCCcccEEEcc
Q 001561 377 ILSLAKNELSGQVPESFGKLTSLLFLSLSNN-SFNHLSGTLSVLQQCKNLTTLILTKNFVGEEIPENVGGFESLMVLALG 455 (1052)
Q Consensus 377 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 455 (1052)
.|+|++|...+.+|..++++++|+.|+|++| .+..+|... .+++|++|++++|.....+|.. ..+|+.|+|+
T Consensus 782 ~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~----~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls 854 (1153)
T PLN03210 782 RLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI----NLESLESLDLSGCSRLRTFPDI---STNISDLNLS 854 (1153)
T ss_pred heeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC----CccccCEEECCCCCcccccccc---ccccCEeECC
Confidence 8888888777778888888888888888876 466666542 5778888888887665555543 3578888999
Q ss_pred CCccccCcchhhhcCCCCcEEeCcCccCCCCCChhhccCCCCCeEeccCCc
Q 001561 456 NCGLKGHIPVWLLRCKKLQVLDLSWNHFDGNIPPWIGQMENLFYLDFSNNT 506 (1052)
Q Consensus 456 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 506 (1052)
+|.++ .+|.++..+++|+.|+|++|+--..+|..+..+++|+.+++++|.
T Consensus 855 ~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 855 RTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 98887 678888889999999998854333677788888899999988885
No 417
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=1.5e-24 Score=272.44 Aligned_cols=194 Identities=19% Similarity=0.234 Sum_probs=138.6
Q ss_pred cCC-CceeeeeceE-------eeCCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 001561 824 AQH-KNLVSLQGYC-------RHGNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHI 895 (1052)
Q Consensus 824 l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 895 (1052)
++| +||++++++| .+++..+.++||+ +++|.+++.. ....+++.++..++.||++||+|||+. +|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN---PDRSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc---ccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 445 5788888877 2334567888987 5699999974 245689999999999999999999986 99
Q ss_pred EEcCCCCCceEECC-------------------CCCeEEeecccccccCCCCC---------------eeeecccccccc
Q 001561 896 VHRDVKSSNILLDE-------------------KFEAHLADFGLSRLLRPYDT---------------HVTTDLVGTLGY 941 (1052)
Q Consensus 896 ~HrDlkp~Nill~~-------------------~~~~kl~DfG~a~~~~~~~~---------------~~~~~~~gt~~y 941 (1052)
+||||||+|||++. ++.+|++|||+++....... ......+||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 44566666666654211000 001124689999
Q ss_pred cCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHH
Q 001561 942 IPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLE 1021 (1052)
Q Consensus 942 ~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1021 (1052)
||||++.+..++.++|||||||++|||++|.+|+... ..... ..... ...+.. .....+..+
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~-----~~~~~---~~~~~-----~~~~~~-----~~~~~~~~~ 243 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK-----SRTMS---SLRHR-----VLPPQI-----LLNWPKEAS 243 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH-----HHHHH---HHHHh-----hcChhh-----hhcCHHHHH
Confidence 9999999999999999999999999999999986421 01111 00000 011100 111224567
Q ss_pred HHHHcccCCCCCCCCHHHHHH
Q 001561 1022 IACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1022 li~~cl~~dP~~RPs~~evl~ 1042 (1052)
++.+|++++|.+||+|.|+++
T Consensus 244 ~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 244 FCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHhCCCChhhCcChHHHhh
Confidence 888999999999999999986
No 418
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1.8e-23 Score=249.81 Aligned_cols=61 Identities=25% Similarity=0.299 Sum_probs=32.3
Q ss_pred ccceecccCceeeecCCCCcccccCcCeeeCCCCcCCCCCCccccCccccCeeeecccccccCCCC
Q 001561 582 HLHVLDLSRNNITGTIPSSISEIRNLEVLDLSSNDLHGSIPGSFEKLTFLSKFSVANNHLQGTIPT 647 (1052)
Q Consensus 582 ~L~~L~Ls~N~l~g~ip~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~ 647 (1052)
+|+.|++++|+|+ .+|... .+|+.|+|++|+|+ .+|..+.++++|..|+|++|+|+|.+|.
T Consensus 403 ~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 403 ELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred CCCEEEccCCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 4555555555555 244322 24455555555555 4555555555555555555555555543
No 419
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.5e-24 Score=215.57 Aligned_cols=250 Identities=23% Similarity=0.360 Sum_probs=191.3
Q ss_pred cccCeEcccCceEEEEEEECCCcEEEEEEecCC--chhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccC
Q 001561 774 NQANIIGCGGFGLVYKATLTNGTKAAVKRLSGD--CGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMEN 851 (1052)
Q Consensus 774 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 851 (1052)
....+|.+...|..|+|+|+ |..+++|++... .....++|..|.-.++-+.||||.++++.|..+....++..||+.
T Consensus 193 nl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~ 271 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF 271 (448)
T ss_pred hhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence 34556889999999999998 555555766432 244557799999999999999999999999999999999999999
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|...+++. .....+..++.++|.++|+|++|||+. ++-|..--+.+..|++|++.+++|+ .+-+++.- .
T Consensus 272 gslynvlhe~--t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris-mad~kfsf-----q 342 (448)
T KOG0195|consen 272 GSLYNVLHEQ--TSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSF-----Q 342 (448)
T ss_pred hHHHHHHhcC--ccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee-cccceeee-----e
Confidence 9999999975 455678889999999999999999997 5555556789999999999998875 12122110 0
Q ss_pred eecccccccccCccccCCcCCC---cccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccccccccc
Q 001561 932 TTDLVGTLGYIPPEYSQTLTAT---CRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIW 1008 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~---~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.....-.|.||+||.++.++.+ .++|+|||++++||+.|.+.||....+-++.-.+ .-..+.
T Consensus 343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki---------------aleglr 407 (448)
T KOG0195|consen 343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI---------------ALEGLR 407 (448)
T ss_pred ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh---------------hhcccc
Confidence 1112346789999988776544 4799999999999999999999754433321110 011111
Q ss_pred chhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 1009 HKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 1009 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
-..++..+..+.+++.-|+..||.+||.++.++-.||.+.
T Consensus 408 v~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 408 VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 2223344557899999999999999999999999999864
No 420
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=4.5e-23 Score=246.49 Aligned_cols=268 Identities=24% Similarity=0.312 Sum_probs=159.6
Q ss_pred ceeeccCcccccccccCCCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEccCCc
Q 001561 209 QILDLSMNHFMGSLQGLDHSPSLKQLHVDNNLLGGDLPDSLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFGNQ 288 (1052)
Q Consensus 209 ~~L~Ls~n~l~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 288 (1052)
..|+|+.|.++.+|..+. ++|+.|++.+|+|+. +|. .+++|++|+|++|+|+. +|.. .++|+.|+|++|.
T Consensus 204 ~~LdLs~~~LtsLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~ 273 (788)
T PRK15387 204 AVLNVGESGLTTLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNP 273 (788)
T ss_pred cEEEcCCCCCCcCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCc-ccCc---ccccceeeccCCc
Confidence 344444444444444332 245555555555542 232 13455555555555552 2321 2345555555555
Q ss_pred CCCCCcccccCccccccccccCCcccCCCCcccccCCCCcEEEecCccccCcCCcccccCCccceeecccccccCCCCcc
Q 001561 289 FSGKLPNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPLPNS 368 (1052)
Q Consensus 289 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 368 (1052)
++ .+|..+ ++|+.|++++|+++. +|. ..++|+.|++++|++++... . ..+|+.|++++|+|++ +|..
T Consensus 274 L~-~Lp~lp---~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~Lp~-l---p~~L~~L~Ls~N~L~~-LP~l 340 (788)
T PRK15387 274 LT-HLPALP---SGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLASLPA-L---PSELCKLWAYNNQLTS-LPTL 340 (788)
T ss_pred hh-hhhhch---hhcCEEECcCCcccc-ccc---cccccceeECCCCccccCCC-C---cccccccccccCcccc-cccc
Confidence 54 233322 334455555555552 232 12456666666666664322 1 2345666666666663 4431
Q ss_pred ccCCCccceeecccccccccCchhhccCCcCcEEeccCCcCCCCcccchhhccCcccceEeccccccCccCCccccCCCc
Q 001561 369 LSDCHDLKILSLAKNELSGQVPESFGKLTSLLFLSLSNNSFNHLSGTLSVLQQCKNLTTLILTKNFVGEEIPENVGGFES 448 (1052)
Q Consensus 369 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 448 (1052)
..+|+.|+|++|+|++ +|.. .++|+.|++++|+|+.+|.. ..+|+.|++++|.+.. +|.. .++
T Consensus 341 ---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~LP~l------~~~L~~LdLs~N~Lt~-LP~l---~s~ 403 (788)
T PRK15387 341 ---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSLPAL------PSGLKELIVSGNRLTS-LPVL---PSE 403 (788)
T ss_pred ---ccccceEecCCCccCC-CCCC---CcccceehhhccccccCccc------ccccceEEecCCcccC-CCCc---ccC
Confidence 1356677777777763 4432 23566667777777766542 2457777777777753 4433 257
Q ss_pred ccEEEccCCccccCcchhhhcCCCCcEEeCcCccCCCCCChhhccCCCCCeEeccCCcccccCCcchhhhhhh
Q 001561 449 LMVLALGNCGLKGHIPVWLLRCKKLQVLDLSWNHFDGNIPPWIGQMENLFYLDFSNNTLTGEIPKSLTELKSL 521 (1052)
Q Consensus 449 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 521 (1052)
|+.|++++|++++ +|... .+|+.|+|++|+++ .+|..++++++|+.|+|++|+|++.+|..+..+.+.
T Consensus 404 L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l~s~ 471 (788)
T PRK15387 404 LKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREITSA 471 (788)
T ss_pred CCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHHhcC
Confidence 8889999999884 66543 46889999999998 799999999999999999999999888887666544
No 421
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.89 E-value=4.9e-23 Score=210.11 Aligned_cols=168 Identities=21% Similarity=0.188 Sum_probs=126.2
Q ss_pred CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCee
Q 001561 852 GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHV 931 (1052)
Q Consensus 852 g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 931 (1052)
|+|.++++.. +..+++.+++.|+.|+++||+|||+. + ||+||+++.++.+|+ ||.++......
T Consensus 1 GsL~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--- 63 (176)
T smart00750 1 VSLADILEVR---GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ--- 63 (176)
T ss_pred CcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc---
Confidence 6888888752 45699999999999999999999986 4 999999999999999 99998754322
Q ss_pred eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchh
Q 001561 932 TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKD 1011 (1052)
Q Consensus 932 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1052)
..||+.|+|||++.+..++.++|||||||++|||++|+.||..... ................ ..+ ...
T Consensus 64 ---~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~---~~~----~~~ 131 (176)
T smart00750 64 ---SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE--LSAILEILLNGMPADD---PRD----RSN 131 (176)
T ss_pred ---CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch--hcHHHHHHHHHhccCC---ccc----ccc
Confidence 2689999999999999999999999999999999999999963221 1111111111111100 000 011
Q ss_pred hHHHH--HHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 1012 REKQL--LEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 1012 ~~~~~--~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
..... .++.+++.+|++.+|++||++.|+++.+..+.
T Consensus 132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 132 LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 11222 26899999999999999999999999776553
No 422
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.88 E-value=2.7e-22 Score=241.81 Aligned_cols=319 Identities=21% Similarity=0.282 Sum_probs=171.5
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCCCCCCC----cCCCCCCceeee----------------eeeCCCCCCCCCCcEEEEEe
Q 001561 34 PFQSCDPSDLLALKEFAGNLTNGSIITS----WSNESMCCQWDG----------------VVCGHGSTGSNAGRVTMLIL 93 (1052)
Q Consensus 34 ~~~~~~~~~~~aLl~~k~~~~~~~~l~s----w~~~~~~c~w~g----------------v~C~~~~~~~~~~~v~~l~L 93 (1052)
+.....++|.+.+++....+.-++++.+ |++.++.|.=.. |.|. .+.||.+..
T Consensus 56 ~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~-------~~~vt~l~~ 128 (754)
T PRK15370 56 PPETASPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGG-------GKSVTYTRV 128 (754)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCchhhccccccCCCCcccccCCcchhhheeeecCCceEEecC-------CCccccccc
Confidence 3455678999999999999987877777 999999996443 6774 244555544
Q ss_pred cCCCCcccCCccccCCcCCCeEec----CCCCCCCCC---cccc-----cCCCCccEEeccCCcccCcccccccccCCcc
Q 001561 94 PRKGLKGIIPRSLGHLNQLKLLDL----SCNHLEGVV---PVEL-----SNLKQLEVLDLSHNMLSGPVSGMLAGLNLIQ 161 (1052)
Q Consensus 94 ~~~~l~g~~~~~l~~l~~L~~L~L----s~n~i~~~~---p~~l-----~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 161 (1052)
-+.........+- ..-.+... ..+.-.+.. ..++ +-..+...|+++++.++..+ ..+. .+|+
T Consensus 129 ~g~~~~~~~~~~~---~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~LtsLP-~~Ip--~~L~ 202 (754)
T PRK15370 129 TESEQASSASGSK---DAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTTIP-ACIP--EQIT 202 (754)
T ss_pred ccccccccCCCCC---ChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCcCC-cccc--cCCc
Confidence 3321111110000 00000000 000000000 0001 11245677888888777643 3232 4677
Q ss_pred EEEccCcccCCcccccccCCcccEEEecCCccCCccchhhhhcccccceeeccCcccccccccCCCCCCCCEEEcccccC
Q 001561 162 SLNVSSNSFNGSLFELGEFSNLAVFNISNNSFTGKLNSRIWSASKEIQILDLSMNHFMGSLQGLDHSPSLKQLHVDNNLL 241 (1052)
Q Consensus 162 ~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~l~~~~~L~~L~L~~N~l 241 (1052)
.|+|++|.++..+..+. ++|+.|++++|+|+ .+|..+. .+|+.|+|++|++..+|
T Consensus 203 ~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~---~~L~~L~Ls~N~L~~LP------------------- 257 (754)
T PRK15370 203 TLILDNNELKSLPENLQ--GNIKTLYANSNQLT-SIPATLP---DTIQEMELSINRITELP------------------- 257 (754)
T ss_pred EEEecCCCCCcCChhhc--cCCCEEECCCCccc-cCChhhh---ccccEEECcCCccCcCC-------------------
Confidence 88888888876655443 46777777777666 3343222 23444555555444433
Q ss_pred CCCCCccccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEccCCcCCCCCcccccCccccccccccCCcccCCCCccc
Q 001561 242 GGDLPDSLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFGNQFSGKLPNVLGNLTQLEFFVAHSNSFSGPLPLSL 321 (1052)
Q Consensus 242 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l 321 (1052)
..+. ++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++ +|..+. ++|+.|++++|+++. +|..+
T Consensus 258 -----~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l 323 (754)
T PRK15370 258 -----ERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LPETL 323 (754)
T ss_pred -----hhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CCccc
Confidence 3332 24555555555554 2343332 355555555555552 333222 345666666666653 33322
Q ss_pred ccCCCCcEEEecCccccCcCCcccccCCccceeecccccccCCCCccccCCCccceeecccccccccCchhhccCCcCcE
Q 001561 322 SLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPLPNSLSDCHDLKILSLAKNELSGQVPESFGKLTSLLF 401 (1052)
Q Consensus 322 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 401 (1052)
.++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ..|+.
T Consensus 324 --~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~ 392 (754)
T PRK15370 324 --PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AALQI 392 (754)
T ss_pred --cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHH
Confidence 2466677777776664 333332 56777777777776 4555443 46777777777776 3454443 25667
Q ss_pred EeccCCcCCCCccc
Q 001561 402 LSLSNNSFNHLSGT 415 (1052)
Q Consensus 402 L~L~~N~l~~l~~~ 415 (1052)
|++++|+|+.+|..
T Consensus 393 LdLs~N~L~~LP~s 406 (754)
T PRK15370 393 MQASRNNLVRLPES 406 (754)
T ss_pred HhhccCCcccCchh
Confidence 77777777666543
No 423
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=4.6e-22 Score=220.96 Aligned_cols=165 Identities=21% Similarity=0.213 Sum_probs=128.5
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC--CCcEEEEEEecCC-----chhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCe
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT--NGTKAAVKRLSGD-----CGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGND 841 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 841 (1052)
...+|++.+.||+|+||+||+|.+. +++.||||++... .....+.+.+|++++++++|+|+++.+.. .+.
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~ 92 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGK 92 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCC
Confidence 3467999999999999999999764 5778899987533 12235568999999999999999853322 245
Q ss_pred EEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC-CCCceEECCCCCeEEeeccc
Q 001561 842 RLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDV-KSSNILLDEKFEAHLADFGL 920 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDl-kp~Nill~~~~~~kl~DfG~ 920 (1052)
.++||||++|++|... . ... ...++.++++||+|||+. +|+|||| ||+|||++.++.+||+|||+
T Consensus 93 ~~LVmE~~~G~~L~~~-~----~~~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 93 DGLVRGWTEGVPLHLA-R----PHG------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred cEEEEEccCCCCHHHh-C----ccc------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 7999999999998632 1 111 146788999999999986 9999999 99999999999999999999
Q ss_pred ccccCCCCCee-------eecccccccccCccccCCc
Q 001561 921 SRLLRPYDTHV-------TTDLVGTLGYIPPEYSQTL 950 (1052)
Q Consensus 921 a~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~ 950 (1052)
|+.+....... .....+++.|+|||++...
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99765432111 1345788899999987643
No 424
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=1.8e-21 Score=218.05 Aligned_cols=258 Identities=21% Similarity=0.244 Sum_probs=192.5
Q ss_pred CCcccCeEcccCceEEEEEEECCC--cEEEEEEecCCchhhHHHHHHHHHHHHhcCC----CceeeeeceE-eeCCeEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLTNG--TKAAVKRLSGDCGQMEREFQAEVEALSRAQH----KNLVSLQGYC-RHGNDRLL 844 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~~g--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l 844 (1052)
+|.+.+.||+|+||.||+|..... ..+|+|............+..|+.++..+.. +++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999986643 4788888765433322267888899888863 5888888888 47778899
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCC-----CCeEEeecc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEK-----FEAHLADFG 919 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~-----~~~kl~DfG 919 (1052)
||+.+ |.+|.++..... .+.++..++.+|+.|++.+|+++|+. |++||||||+|+++... ..+++.|||
T Consensus 99 VM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 99977 889999775543 56799999999999999999999986 99999999999999865 469999999
Q ss_pred cccccC--CCCCe------e-eecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHH
Q 001561 920 LSRLLR--PYDTH------V-TTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWV 990 (1052)
Q Consensus 920 ~a~~~~--~~~~~------~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~ 990 (1052)
+|+.+. ..... . .....||..|++++...+...+.+.|+||++.++.|+..|..||.......... ..
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~---~~ 249 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKS---KF 249 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHH---HH
Confidence 999322 21111 1 123569999999999999999999999999999999999999996433222111 11
Q ss_pred HHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 991 FQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
........... .......++.++...+-..+..++|....+...+++.
T Consensus 250 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 250 EKDPRKLLTDR---------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred HHHhhhhcccc---------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence 11111111000 0111122455666666668999999999999887655
No 425
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=1.3e-21 Score=200.76 Aligned_cols=258 Identities=18% Similarity=0.229 Sum_probs=201.9
Q ss_pred cCCcccCeEcccCceEEEEEE-ECCCcEEEEEEecCCchhhHHHHHHHHHHHHhc-CCCceeeeeceEeeCCeEEEEEEe
Q 001561 771 NNFNQANIIGCGGFGLVYKAT-LTNGTKAAVKRLSGDCGQMEREFQAEVEALSRA-QHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
-+|++.++||+|.||.++.|. +-+++.||||.-.... ...++..|.+..+.+ ..++|..++.+..++..-.+|+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 479999999999999999997 4579999999764332 235678899999888 478999999888888888999998
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC-----CCCeEEeecccccc
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE-----KFEAHLADFGLSRL 923 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~-----~~~~kl~DfG~a~~ 923 (1052)
+ |.+|++...- .++.++..++..+|.|++.-++|+|+. ..|.|||||+|+||.. ...+.++|||+|+.
T Consensus 106 L-GPSLEDLFD~---CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 106 L-GPSLEDLFDL---CGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred h-CcCHHHHHHH---hcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 8 8899987653 467899999999999999999999986 9999999999999974 34589999999999
Q ss_pred cCCCCCeee------ecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcc
Q 001561 924 LRPYDTHVT------TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEK 997 (1052)
Q Consensus 924 ~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
+.+..+... ....||.+||+-....+..-+.+.|+-|+|-++++.+-|..||++...++-.+-.+.+-..+...
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T 258 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRST 258 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccC
Confidence 876655433 34589999999999999999999999999999999999999999766555433333332222222
Q ss_pred cccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 001561 998 REVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDG 1046 (1052)
Q Consensus 998 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 1046 (1052)
... ...+..+.++..-+...-+.+-.+-|..+.+...+.+
T Consensus 259 ~i~---------~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~d 298 (449)
T KOG1165|consen 259 PIE---------VLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDD 298 (449)
T ss_pred CHH---------HHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 111 1122334466666766677788888988777665443
No 426
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=5.6e-22 Score=194.64 Aligned_cols=258 Identities=20% Similarity=0.247 Sum_probs=199.4
Q ss_pred hcCCcccCeEcccCceEEEEEE-ECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCC-CceeeeeceEeeCCeEEEEEE
Q 001561 770 TNNFNQANIIGCGGFGLVYKAT-LTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQH-KNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e 847 (1052)
.++|++++.||.|+||.+|.|. ..+|+.||||.-+..... .++..|.++.+.++| ..|..+..|..+...-.+|||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 4689999999999999999997 668999999987655433 457788999999964 678888888888888899999
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC---CCCeEEeeccccccc
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE---KFEAHLADFGLSRLL 924 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~---~~~~kl~DfG~a~~~ 924 (1052)
.+ |.+|++...- ....++..+++-.|-|++.-++|+|.. +++||||||+|+|+.- ...+.++|||+|+.+
T Consensus 92 LL-GPsLEdLfnf---C~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 92 LL-GPSLEDLFNF---CSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred cc-CccHHHHHHH---HhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhh
Confidence 88 8899998764 355689999999999999999999986 9999999999999973 456899999999987
Q ss_pred CCCCCeee------ecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc
Q 001561 925 RPYDTHVT------TDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 925 ~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
.+..+... ....||.+|.+-....+...+.+.|+-|+|.++.++--|..||++....+-..-.+.+.+.+-...
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ 244 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTP 244 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCC
Confidence 65443322 345899999998887777888899999999999999999999987654443333333333222111
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001561 999 EVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLD 1045 (1052)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1045 (1052)
. + ......+.++.-.+..|-..--++-|....+-+.+.
T Consensus 245 i-e--------~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 245 I-E--------VLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred H-H--------HHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 1 1 111222335667777888888888888777766554
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=5.8e-22 Score=234.88 Aligned_cols=259 Identities=21% Similarity=0.245 Sum_probs=191.6
Q ss_pred cccCeEcccCceEEEEEEEC-CCcEEEEEEec----C-Cchh-hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 774 NQANIIGCGGFGLVYKATLT-NGTKAAVKRLS----G-DCGQ-MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 774 ~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~----~-~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
....++|.|++|.|+.+... ..+.++.|.++ . +... ....+..|+.+-..++|||++..+..+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 34678999999988877643 44445555443 1 1111 1122667888888899999999988888777777779
Q ss_pred EeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 847 SYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 847 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+++ +|..++.. ...++..++..++.|+..|++|+|++ ||.|||+|++|++++.+|.+||+|||.+....-
T Consensus 401 E~~~~-Dlf~~~~~----~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMS----NGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred hcccH-HHHHHHhc----ccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeecc
Confidence 99999 99988864 24678899999999999999999997 999999999999999999999999999987643
Q ss_pred CCC---eeeecccccccccCccccCCcCCCc-ccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccccc
Q 001561 927 YDT---HVTTDLVGTLGYIPPEYSQTLTATC-RGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEI 1002 (1052)
Q Consensus 927 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~-~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
... ......+|+.+|+|||+..+..|++ ..||||.|+++..|.+|+.||-........- ..... ....
T Consensus 473 ~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-----~~~~~---~~~~ 544 (601)
T KOG0590|consen 473 PWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-----KTNNY---SDQR 544 (601)
T ss_pred CcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-----hhhcc---cccc
Confidence 322 3456679999999999999999987 4799999999999999999996433221110 00000 0000
Q ss_pred ccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcC
Q 001561 1003 IDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT--WLDGIG 1048 (1052)
Q Consensus 1003 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~ 1048 (1052)
-...-........+.+-..++.+|++++|.+|.|+.+|++ |++.|.
T Consensus 545 ~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 545 NIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred ccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 0000011111223446788999999999999999999988 777664
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=7e-21 Score=229.66 Aligned_cols=245 Identities=22% Similarity=0.351 Sum_probs=117.3
Q ss_pred cceeeccCcccccccccCCCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEccCC
Q 001561 208 IQILDLSMNHFMGSLQGLDHSPSLKQLHVDNNLLGGDLPDSLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFGN 287 (1052)
Q Consensus 208 L~~L~Ls~n~l~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 287 (1052)
.+.|++++++++.+|..+ .++|+.|+|++|+|+ .+|..+. .+|++|++++|+|+ .+|..+. .+|+.|+|++|
T Consensus 180 ~~~L~L~~~~LtsLP~~I--p~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N 251 (754)
T PRK15370 180 KTELRLKILGLTTIPACI--PEQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSIN 251 (754)
T ss_pred ceEEEeCCCCcCcCCccc--ccCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCC
Confidence 445555555555555443 245666666666666 3344333 35666666666665 3343332 24566666666
Q ss_pred cCCCCCcccccCccccccccccCCcccCCCCcccccCCCCcEEEecCccccCcCCcccccCCccceeecccccccCCCCc
Q 001561 288 QFSGKLPNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPLPN 367 (1052)
Q Consensus 288 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 367 (1052)
++. .+|..+. ++|+.|++++|+++. +|..+. ++|+.|+|++|+|++ +|.
T Consensus 252 ~L~-~LP~~l~--------------------------s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~ 300 (754)
T PRK15370 252 RIT-ELPERLP--------------------------SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRT-LPA 300 (754)
T ss_pred ccC-cCChhHh--------------------------CCCCEEECcCCccCc-cccccC--CCCcEEECCCCcccc-Ccc
Confidence 555 3443332 234444444444442 222221 245555555555552 333
Q ss_pred cccCCCccceeecccccccccCchhhccCCcCcEEeccCCcCCCCcccchhhccCcccceEeccccccCccCCccccCCC
Q 001561 368 SLSDCHDLKILSLAKNELSGQVPESFGKLTSLLFLSLSNNSFNHLSGTLSVLQQCKNLTTLILTKNFVGEEIPENVGGFE 447 (1052)
Q Consensus 368 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 447 (1052)
.+. ++|+.|++++|+++. +|..+. ++|+.|++++|.++.+|..+ .++|+.|++++|.+. .+|..+. +
T Consensus 301 ~lp--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~LP~~l-----~~sL~~L~Ls~N~L~-~LP~~lp--~ 367 (754)
T PRK15370 301 HLP--SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTSLPASL-----PPELQVLDVSKNQIT-VLPETLP--P 367 (754)
T ss_pred cch--hhHHHHHhcCCcccc-CCcccc--ccceeccccCCccccCChhh-----cCcccEEECCCCCCC-cCChhhc--C
Confidence 322 345556666666653 333322 45666666666665554322 134444444444442 2232221 3
Q ss_pred cccEEEccCCccccCcchhhhcCCCCcEEeCcCccCCCCCChhh----ccCCCCCeEeccCCccc
Q 001561 448 SLMVLALGNCGLKGHIPVWLLRCKKLQVLDLSWNHFDGNIPPWI----GQMENLFYLDFSNNTLT 508 (1052)
Q Consensus 448 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~----~~l~~L~~L~Ls~N~l~ 508 (1052)
+|+.|+|++|+|+ .+|..+. ..|+.|++++|+++ .+|..+ +.++++..|++.+|.++
T Consensus 368 ~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 368 TITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 4555555555555 3333332 24555555655555 334322 22345555566655554
No 429
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.84 E-value=1.7e-19 Score=203.98 Aligned_cols=259 Identities=28% Similarity=0.411 Sum_probs=197.2
Q ss_pred CcccCeEcccCceEEEEEEECCCcEEEEEEecCCchh---hHHHHHHHHHHHHhcCCC-ceeeeeceEeeCCeEEEEEEe
Q 001561 773 FNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQ---MEREFQAEVEALSRAQHK-NLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 848 (1052)
|+..+.||.|+||.||++... ..+|+|.+...... ....+.+|+..++.+.|+ +++++.+++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667788999999999999876 78899988755432 467789999999999988 799999999777778999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCC-CeEEeecccccccCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKF-EAHLADFGLSRLLRPY 927 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~-~~kl~DfG~a~~~~~~ 927 (1052)
+.++++.+++...... ..++......++.|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++.....
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999666543211 3688899999999999999999996 899999999999999988 7999999999865443
Q ss_pred CCe-----eeecccccccccCccccCC---cCCCcccchHHHHHHHHHHHcCCCCCcccCCC-CchhHHHHHHHhhhccc
Q 001561 928 DTH-----VTTDLVGTLGYIPPEYSQT---LTATCRGDVYSFGVVLLELLTGRRPVEVCKGK-NCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 928 ~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~elltG~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 998 (1052)
... ......||..|+|||...+ ..+....|+||+|++++++++|..||...... ........+......
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-- 233 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-- 233 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc--
Confidence 322 2356789999999998887 57888999999999999999999997643221 011222221111111
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 999 EVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.................+.+++.+|+..+|..|.++.+...
T Consensus 234 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 234 ---SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred ---ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 00000000000222346789999999999999999988765
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=3e-20 Score=191.45 Aligned_cols=170 Identities=14% Similarity=0.157 Sum_probs=133.4
Q ss_pred hcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHH---------HHHHHHHHHHhcCCCceeeeeceEeeC-
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMER---------EFQAEVEALSRAQHKNLVSLQGYCRHG- 839 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~---------~~~~E~~~l~~l~h~niv~l~~~~~~~- 839 (1052)
.++|+..+++|.|+||.||.+.. ++..+|+|.+.......+. .+.+|+..+.++.||+|..+.+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 67899999999999999999766 5778999999755433332 268899999999999999999886543
Q ss_pred -------CeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCC
Q 001561 840 -------NDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFE 912 (1052)
Q Consensus 840 -------~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~ 912 (1052)
...++||||++|.+|.++.. ++. ....+++.+++.+|+. +++|||+||+||+++.+|
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-
Confidence 35789999999999977632 222 2355899999999986 999999999999999998
Q ss_pred eEEeecccccccCCCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHH
Q 001561 913 AHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELL 969 (1052)
Q Consensus 913 ~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell 969 (1052)
++++|||..+........ ..+.....+..++|+|+||+++....
T Consensus 173 i~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999998765321110 11344445667899999999887664
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.80 E-value=2e-19 Score=184.06 Aligned_cols=140 Identities=18% Similarity=0.147 Sum_probs=108.8
Q ss_pred cCeEcccCceEEEEEEECCCcEEEEEEecCCchh--h------------------------HHHHHHHHHHHHhcCCCce
Q 001561 776 ANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQ--M------------------------EREFQAEVEALSRAQHKNL 829 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~h~ni 829 (1052)
...||+|+||.||+|...+|+.||||+++..... . ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999999878999999998754211 0 1122459999999988877
Q ss_pred eeeeceEeeCCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHH-HhcCCCCeEEcCCCCCceEEC
Q 001561 830 VSLQGYCRHGNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYL-HKVCEPHIVHRDVKSSNILLD 908 (1052)
Q Consensus 830 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~i~HrDlkp~Nill~ 908 (1052)
.....+.. ...++||||++++++..... ....++...+..++.|++.+++|+ |+. +|+||||||+||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~----~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL----KDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh----hcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence 44333222 23489999999987654432 234688999999999999999999 675 999999999999998
Q ss_pred CCCCeEEeecccccccC
Q 001561 909 EKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 909 ~~~~~kl~DfG~a~~~~ 925 (1052)
++.++++|||+|....
T Consensus 153 -~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 -DGKLYIIDVSQSVEHD 168 (190)
T ss_pred -CCcEEEEEccccccCC
Confidence 4789999999997543
No 432
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.79 E-value=3.3e-19 Score=189.25 Aligned_cols=234 Identities=23% Similarity=0.325 Sum_probs=149.2
Q ss_pred CCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcC----------CCceeeeeceEe
Q 001561 772 NFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQ----------HKNLVSLQGYCR 837 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~----------h~niv~l~~~~~ 837 (1052)
.+...+.||.|+++.||.+.+. +++++|+|++.... ....+++.+|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 4556788999999999999876 68999999875332 223455666655444432 222333333221
Q ss_pred ---------eC---C-----eEEEEEEeccCCChhhhhhc---ccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 001561 838 ---------HG---N-----DRLLIYSYMENGSLDYWLHE---SVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVH 897 (1052)
Q Consensus 838 ---------~~---~-----~~~lv~e~~~~g~L~~~l~~---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~H 897 (1052)
.. . ..+++|+-+ -++|.+++.. .......+....++.+..|+++.+++||+. |++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 11 1 125677777 4577776542 222233455667788889999999999997 9999
Q ss_pred cCCCCCceEECCCCCeEEeecccccccCCCCCeeeecccccccccCccccCC--------cCCCcccchHHHHHHHHHHH
Q 001561 898 RDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQT--------LTATCRGDVYSFGVVLLELL 969 (1052)
Q Consensus 898 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslGvil~ell 969 (1052)
+||+|+|++++++|.++++||+.....+. .......+..|.+||.... ..++.+.|.|++|+++|.|+
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~----~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGT----RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTE----EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCc----eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 99999999999999999999998876543 1221345578999996533 35788999999999999999
Q ss_pred cCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCC
Q 001561 970 TGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRR 1034 (1052)
Q Consensus 970 tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 1034 (1052)
+|+.||+........+. ...... ..++.+.++|..+++++|++|
T Consensus 245 C~~lPf~~~~~~~~~~~--------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW--------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSGG--------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccccc--------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999974322111110 111222 556689999999999999988
No 433
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.78 E-value=9.6e-20 Score=213.06 Aligned_cols=250 Identities=22% Similarity=0.231 Sum_probs=178.6
Q ss_pred CCcccCeEcccCceEEEEEEECCCcEEEEEEecCCc-hhhHHHHH---HHHHHHHhcCCCceeeeeceEeeCCeEEEEEE
Q 001561 772 NFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDC-GQMEREFQ---AEVEALSRAQHKNLVSLQGYCRHGNDRLLIYS 847 (1052)
Q Consensus 772 ~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~-~~~~~~~~---~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 847 (1052)
+|...+.+|.+.|=+|.+|+.+.|. |+||++.+.. ...-+.|. +|++ ...++|||.+++.-+-......|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5666888999999999999998887 8889886554 22233333 3444 455689999999888777777788888
Q ss_pred eccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc--C
Q 001561 848 YMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL--R 925 (1052)
Q Consensus 848 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~--~ 925 (1052)
|... +|.|.+. .+..+...+...||.|++.|+..+|.. +|+|||||.+|||++.=.-+.++||..-+.. .
T Consensus 102 yvkh-nLyDRlS----TRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 102 YVKH-NLYDRLS----TRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred HHhh-hhhhhhc----cchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCC
Confidence 8854 6777664 455678888999999999999999986 9999999999999999889999999765542 2
Q ss_pred CCCCeeeecccc----cccccCccccCC----------cC-CCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHH
Q 001561 926 PYDTHVTTDLVG----TLGYIPPEYSQT----------LT-ATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSW 989 (1052)
Q Consensus 926 ~~~~~~~~~~~g----t~~y~aPE~~~~----------~~-~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~ 989 (1052)
.++.....-+.. --.|.|||.+.. .. .+++-||||.||++.|+++ |++||+-. .
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS----------Q 243 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS----------Q 243 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH----------H
Confidence 222222211222 237999995432 12 5678899999999999998 79998621 1
Q ss_pred HHHhhhcc-cccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcC
Q 001561 990 VFQMKSEK-REVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 990 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1048 (1052)
.+.....+ ...+..-.. -+...+++++..|++.||++|-++++.++.-+++.
T Consensus 244 L~aYr~~~~~~~e~~Le~-------Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~ 296 (1431)
T KOG1240|consen 244 LLAYRSGNADDPEQLLEK-------IEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLV 296 (1431)
T ss_pred HHhHhccCccCHHHHHHh-------CcCccHHHHHHHHHccCchhccCHHHHHHhhhccc
Confidence 11111110 000000000 01125789999999999999999999999866654
No 434
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=2e-18 Score=173.55 Aligned_cols=184 Identities=19% Similarity=0.128 Sum_probs=138.5
Q ss_pred cccCeEcccCceEEEEEEECCCcEEEEEEecCCch----hhHHHHHHHHHHHHhcC-CCceeeeeceEeeCCeEEEEEEe
Q 001561 774 NQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCG----QMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 774 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
.+...|++|+||+||.+.. .+.+++.+.+..... .....+.+|++++++++ |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3467899999999997765 578888887764432 11225789999999995 5889999886 346899999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC-CCCceEECCCCCeEEeecccccccCCC
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDV-KSSNILLDEKFEAHLADFGLSRLLRPY 927 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDl-kp~Nill~~~~~~kl~DfG~a~~~~~~ 927 (1052)
++|.+|...... ....++.|++++++++|+. ||+|||| ||+||++++++.++|+|||+|....+.
T Consensus 80 I~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 80 LAGAAMYQRPPR-----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred ecCccHHhhhhh-----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 999988654311 1134678999999999997 9999999 799999999999999999999865432
Q ss_pred CCe----e--------eecccccccccCccccC--CcCCCcccchHHHHHHHHHHHcCCCCCc
Q 001561 928 DTH----V--------TTDLVGTLGYIPPEYSQ--TLTATCRGDVYSFGVVLLELLTGRRPVE 976 (1052)
Q Consensus 928 ~~~----~--------~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslGvil~elltG~~pf~ 976 (1052)
... . ..-...++.|++|+... ...--.+.+.++-|.-+|.++|+..|.-
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 210 0 00113577888888422 2222357899999999999999999864
No 435
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=2.1e-18 Score=177.51 Aligned_cols=140 Identities=18% Similarity=0.156 Sum_probs=111.3
Q ss_pred cCeEcccCceEEEEEEECCCcEEEEEEecCCchh--------------------------hHHHHHHHHHHHHhcCCCce
Q 001561 776 ANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQ--------------------------MEREFQAEVEALSRAQHKNL 829 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~h~ni 829 (1052)
...||+|++|.||+|...+|+.||||+++..... ....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999998778999999998754211 01223678999999999987
Q ss_pred eeeeceEeeCCeEEEEEEeccCCChhhh-hhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCceEE
Q 001561 830 VSLQGYCRHGNDRLLIYSYMENGSLDYW-LHESVDKDSVLKWDVRLKIAQGAARGLAYLHK-VCEPHIVHRDVKSSNILL 907 (1052)
Q Consensus 830 v~l~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~i~HrDlkp~Nill 907 (1052)
.....+... ..++||||++++++... +. ...++..++..++.+++.++.++|+ . +|+||||||+||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK-----DVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh-----hccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEE
Confidence 554444332 24899999998855332 32 2346788899999999999999998 5 99999999999999
Q ss_pred CCCCCeEEeecccccccCC
Q 001561 908 DEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 908 ~~~~~~kl~DfG~a~~~~~ 926 (1052)
+ ++.++++|||+|+....
T Consensus 152 ~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 152 H-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred E-CCCEEEEEcccceecCC
Confidence 9 88999999999987643
No 436
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.76 E-value=5.6e-20 Score=207.01 Aligned_cols=276 Identities=24% Similarity=0.299 Sum_probs=128.5
Q ss_pred EecCCccCCccchhhhhcccccceeeccCcccc-----cccccCCCCCCCCEEEcccccCCC------CCCccccCCCCC
Q 001561 187 NISNNSFTGKLNSRIWSASKEIQILDLSMNHFM-----GSLQGLDHSPSLKQLHVDNNLLGG------DLPDSLYSMSSL 255 (1052)
Q Consensus 187 ~Ls~n~l~~~~~~~~~~~~~~L~~L~Ls~n~l~-----~~~~~l~~~~~L~~L~L~~N~l~~------~~p~~l~~l~~L 255 (1052)
+|..+.+++.--...+..+..|+.|+++++.++ .++..+...+++++|+++++.+.+ .++..+..+++|
T Consensus 4 ~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L 83 (319)
T cd00116 4 SLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGL 83 (319)
T ss_pred ccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCce
Confidence 334444443333344444444555555555542 122334455556666666665552 123345556666
Q ss_pred cEEEcccCcCCchhhhhhcCCCC---CcEEEccCCcCCCC----CcccccCc-cccccccccCCcccCC----CCccccc
Q 001561 256 QHVSLSVNNFSGQLSEKISNLTS---LRHLIIFGNQFSGK----LPNVLGNL-TQLEFFVAHSNSFSGP----LPLSLSL 323 (1052)
Q Consensus 256 ~~L~L~~N~l~~~~~~~~~~l~~---L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~l~~N~l~~~----~~~~l~~ 323 (1052)
++|++++|.+.+..+..+..+.+ |++|++++|++++. +...+..+ ++|+.|++++|.+++. ++..+..
T Consensus 84 ~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~ 163 (319)
T cd00116 84 QELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRA 163 (319)
T ss_pred eEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHh
Confidence 66666666666555555544444 66666666666521 11222333 4444444444444421 1222333
Q ss_pred CCCCcEEEecCccccCc----CCcccccCCccceeecccccccCC----CCccccCCCccceeecccccccccCchhhcc
Q 001561 324 CSKLHVLDLRNNSLTGP----IDLNFSGLSSLCTLDLATNHFSGP----LPNSLSDCHDLKILSLAKNELSGQVPESFGK 395 (1052)
Q Consensus 324 l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 395 (1052)
+++|++|++++|.+++. ++..+..+++|+.|+|++|.+++. ++..+..+++|++|++++|.+++.....+..
T Consensus 164 ~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~ 243 (319)
T cd00116 164 NRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALAS 243 (319)
T ss_pred CCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHH
Confidence 44455555555544421 111122233444444444444322 1122333344444444444444321111111
Q ss_pred CCcCcEEeccCCcCCCCcccchhhccCcccceEeccccccCc----cCCccccCCCcccEEEccCCccccC----cchhh
Q 001561 396 LTSLLFLSLSNNSFNHLSGTLSVLQQCKNLTTLILTKNFVGE----EIPENVGGFESLMVLALGNCGLKGH----IPVWL 467 (1052)
Q Consensus 396 l~~L~~L~L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l 467 (1052)
. .....+.|++|++++|.++. .+...+..+++|+.+++++|.++.. ....+
T Consensus 244 ~---------------------~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~ 302 (319)
T cd00116 244 A---------------------LLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESL 302 (319)
T ss_pred H---------------------HhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHH
Confidence 0 00012455555555555431 2233444556777777777777744 33344
Q ss_pred hcC-CCCcEEeCcCccC
Q 001561 468 LRC-KKLQVLDLSWNHF 483 (1052)
Q Consensus 468 ~~l-~~L~~L~Ls~N~l 483 (1052)
... +.|+.|++.+|.+
T Consensus 303 ~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 303 LEPGNELESLWVKDDSF 319 (319)
T ss_pred hhcCCchhhcccCCCCC
Confidence 444 6788888888764
No 437
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.76 E-value=9.4e-20 Score=205.19 Aligned_cols=273 Identities=23% Similarity=0.237 Sum_probs=129.2
Q ss_pred EEcccccCC-CCCCccccCCCCCcEEEcccCcCCch----hhhhhcCCCCCcEEEccCCcCCC------CCcccccCccc
Q 001561 234 LHVDNNLLG-GDLPDSLYSMSSLQHVSLSVNNFSGQ----LSEKISNLTSLRHLIIFGNQFSG------KLPNVLGNLTQ 302 (1052)
Q Consensus 234 L~L~~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~~ 302 (1052)
|+|.++.++ ......+..+.+|++|+++++.+++. ++..+...++|++|+++++.+.+ .++..+.++++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 444444444 22333344455566666666555322 33444455556666666655541 12223444445
Q ss_pred cccccccCCcccCCCCcccccCCC---CcEEEecCccccC----cCCcccccC-CccceeecccccccCC----CCcccc
Q 001561 303 LEFFVAHSNSFSGPLPLSLSLCSK---LHVLDLRNNSLTG----PIDLNFSGL-SSLCTLDLATNHFSGP----LPNSLS 370 (1052)
Q Consensus 303 L~~L~l~~N~l~~~~~~~l~~l~~---L~~L~L~~N~l~~----~~~~~~~~l-~~L~~L~Ls~N~l~~~----~p~~~~ 370 (1052)
|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++. ++..+.
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 162 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALR 162 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHH
Confidence 555555555554433333333333 6666666666552 111223334 5566666666666532 223344
Q ss_pred CCCccceeeccccccccc----CchhhccCCcCcEEeccCCcCCCCcc--cchhhccCcccceEeccccccCccCCcccc
Q 001561 371 DCHDLKILSLAKNELSGQ----VPESFGKLTSLLFLSLSNNSFNHLSG--TLSVLQQCKNLTTLILTKNFVGEEIPENVG 444 (1052)
Q Consensus 371 ~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~l~~--~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 444 (1052)
.+++|+.|++++|.+++. ++..+..+++|+.|++++|.++.... ....+..+++|++|++++|.+++.....+.
T Consensus 163 ~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~ 242 (319)
T cd00116 163 ANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALA 242 (319)
T ss_pred hCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHH
Confidence 555666666666666532 22233444566666666666543211 112233445555555555554432221111
Q ss_pred -----CCCcccEEEccCCcccc----CcchhhhcCCCCcEEeCcCccCCCC----CChhhccC-CCCCeEeccCCc
Q 001561 445 -----GFESLMVLALGNCGLKG----HIPVWLLRCKKLQVLDLSWNHFDGN----IPPWIGQM-ENLFYLDFSNNT 506 (1052)
Q Consensus 445 -----~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~Ls~N~ 506 (1052)
..+.|+.|++++|.++. .+...+..+++|+++++++|.++.. +...+-.. +.|++||+.+|.
T Consensus 243 ~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 243 SALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 12455566666555541 2233344445555555555555533 22222222 455555555554
No 438
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.75 E-value=2.9e-19 Score=200.38 Aligned_cols=225 Identities=25% Similarity=0.262 Sum_probs=176.2
Q ss_pred eEcccCceEEEEEEE----CCCcEEEEEEecCCchh--hHHHHHHHHHHHHhcC-CCceeeeeceEeeCCeEEEEEEecc
Q 001561 778 IIGCGGFGLVYKATL----TNGTKAAVKRLSGDCGQ--MEREFQAEVEALSRAQ-HKNLVSLQGYCRHGNDRLLIYSYME 850 (1052)
Q Consensus 778 ~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 850 (1052)
++|+|.||.|+.++. +.|.-+|.|+.++.... .......|..++...+ ||.+|++...++.+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 379999999998742 24667888877654311 1113456777888886 9999999999999999999999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH 930 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 930 (1052)
+|.+...+.. ...++......+...++-|++++|+. +|+|||+|++||+++.+|++++.|||.++..-.....
T Consensus 81 gg~lft~l~~----~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~ 153 (612)
T KOG0603|consen 81 GGDLFTRLSK----EVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA 153 (612)
T ss_pred cchhhhcccc----CCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence 9998877763 45577778888888999999999997 9999999999999999999999999999875433221
Q ss_pred eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccch
Q 001561 931 VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHK 1010 (1052)
Q Consensus 931 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
+||..|||||++. .+..++|.||||++++||+||..||.. +.. ......+ ..
T Consensus 154 -----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-------~~~---~~Il~~~-----------~~ 205 (612)
T KOG0603|consen 154 -----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-------DTM---KRILKAE-----------LE 205 (612)
T ss_pred -----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-------HHH---HHHhhhc-----------cC
Confidence 8999999999988 678899999999999999999999963 111 1111111 12
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCH
Q 001561 1011 DREKQLLEMLEIACKCIDQDPRRRPFI 1037 (1052)
Q Consensus 1011 ~~~~~~~~l~~li~~cl~~dP~~RPs~ 1037 (1052)
.+......+.+++.++...+|..|--.
T Consensus 206 ~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 206 MPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred CchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 233444567888889999999998754
No 439
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=1e-17 Score=201.56 Aligned_cols=251 Identities=19% Similarity=0.194 Sum_probs=184.6
Q ss_pred HHHHhhcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcC---CCceeeeeceEeeCCe
Q 001561 765 DLLKSTNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQ---HKNLVSLQGYCRHGND 841 (1052)
Q Consensus 765 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~ 841 (1052)
+.....+.|.+.+.||+|+||+||+|...+|+.||+|+-+.... -+|.--.+++.|++ -+.|..+...+.-.+.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 34445678999999999999999999988899999998764431 12333334555555 2345556666666778
Q ss_pred EEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC-------CCCCeE
Q 001561 842 RLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD-------EKFEAH 914 (1052)
Q Consensus 842 ~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~-------~~~~~k 914 (1052)
-++|+||.+.|+|.+++. ....++|..++.++.|+++.+++||.+ +|||+||||+|+|+. ....++
T Consensus 769 S~lv~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred ceeeeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceE
Confidence 899999999999999987 466789999999999999999999998 999999999999995 235589
Q ss_pred EeecccccccCCCCC-eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHh
Q 001561 915 LADFGLSRLLRPYDT-HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQM 993 (1052)
Q Consensus 915 l~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~ 993 (1052)
|+|||.+..+..... ......++|-.+-.+|+..++.+++++|.|.++-+++-|+.|+.-= ..
T Consensus 842 lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q----------------~~ 905 (974)
T KOG1166|consen 842 LIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME----------------VK 905 (974)
T ss_pred EEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH----------------hc
Confidence 999999987654333 2445678899999999999999999999999999999999887631 00
Q ss_pred hhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 001561 994 KSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGI 1047 (1052)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1047 (1052)
.+. ...++..+..-... .-..+++..++++|-..=|...++...++++
T Consensus 906 ~g~---~~~~~~~~~Ry~~~---~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~ 953 (974)
T KOG1166|consen 906 NGS---SWMVKTNFPRYWKR---DMWNKFFDLLLNPDCDTLPNLQELRTELEEV 953 (974)
T ss_pred CCc---ceeccccchhhhhH---HHHHHHHHHHhCcCcccchhHHHHHHHHHHH
Confidence 011 11111111001111 1234566677776666667777777777654
No 440
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.73 E-value=1.2e-17 Score=188.51 Aligned_cols=216 Identities=28% Similarity=0.439 Sum_probs=163.3
Q ss_pred HhcCCCceeeeeceEeeCCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCC
Q 001561 822 SRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVK 901 (1052)
Q Consensus 822 ~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlk 901 (1052)
+.+.|.|+.+++|.+.++...+.|.+|+..|+|.+.+.. ....+++.-...+..+++.|++|+|.. +-..|+.++
T Consensus 2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~hg~l~ 76 (484)
T KOG1023|consen 2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNS--PIGYHGALK 76 (484)
T ss_pred cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcC--cceeeeeec
Confidence 567899999999999999999999999999999999976 456689999999999999999999986 333999999
Q ss_pred CCceEECCCCCeEEeecccccccCCC-CCeeeecccccccccCccccCCc-------CCCcccchHHHHHHHHHHHcCCC
Q 001561 902 SSNILLDEKFEAHLADFGLSRLLRPY-DTHVTTDLVGTLGYIPPEYSQTL-------TATCRGDVYSFGVVLLELLTGRR 973 (1052)
Q Consensus 902 p~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwslGvil~elltG~~ 973 (1052)
++|.++|....+|++|||+....... .........-..-|.|||.+... ..+.++||||||++++|+++.+.
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 99999999999999999998876421 11111112234579999987653 14678999999999999999999
Q ss_pred CCcccCCCCc-hhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcCc
Q 001561 974 PVEVCKGKNC-RDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWLDGIGI 1049 (1052)
Q Consensus 974 pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1049 (1052)
||+....... .+++.++.. .....+-+.++... +...++..++..||..+|++||++++|-..++.+-.
T Consensus 157 ~~~~~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKK-----GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred ccccccccCChHHHHHHHHh-----cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 9975432222 334433332 01111122222111 233368899999999999999999999988876643
No 441
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.72 E-value=1.4e-19 Score=168.72 Aligned_cols=162 Identities=28% Similarity=0.463 Sum_probs=107.2
Q ss_pred cCcccceEeccccccCccCCccccCCCcccEEEccCCccccCcchhhhcCCCCcEEeCcCccCCCCCChhhccCCCCCeE
Q 001561 421 QCKNLTTLILTKNFVGEEIPENVGGFESLMVLALGNCGLKGHIPVWLLRCKKLQVLDLSWNHFDGNIPPWIGQMENLFYL 500 (1052)
Q Consensus 421 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 500 (1052)
.+.+.+.|.|++|.++ .+|..+..+.+|+.|++.+|++. .+|..++.+++|+.|+++-|++. ..|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 4455666666666663 45666777888888888888887 78888888888888888888887 788888888889999
Q ss_pred eccCCcccc-cCCcchhhhhhhcccCCCCCCCCCCCCccceeeccccCCCcCCCCCCCCCCeeeeecCcccccCCccccc
Q 001561 501 DFSNNTLTG-EIPKSLTELKSLISSNCTSSNPTASAGIPLYVKHNRSTNGLPYNQASSFPPSVFLSNNRINGTIPPEIGQ 579 (1052)
Q Consensus 501 ~Ls~N~l~~-~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~Ls~N~l~g~ip~~~~~ 579 (1052)
||++|++.. .+|.. |-.
T Consensus 108 dltynnl~e~~lpgn--------------------------------------------------------------ff~ 125 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGN--------------------------------------------------------------FFY 125 (264)
T ss_pred hccccccccccCCcc--------------------------------------------------------------hhH
Confidence 988888763 33444 444
Q ss_pred ccccceecccCceeeecCCCCcccccCcCeeeCCCCcCCCCCCccccCccccCeeeecccccccCCCCCC
Q 001561 580 LKHLHVLDLSRNNITGTIPSSISEIRNLEVLDLSSNDLHGSIPGSFEKLTFLSKFSVANNHLQGTIPTGG 649 (1052)
Q Consensus 580 l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~ 649 (1052)
++.|+.|+|++|.+. .+|..++++++|+.|.+..|.+- .+|++++.|+.|+.|++.+|+|+-.+|.-+
T Consensus 126 m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~vlppel~ 193 (264)
T KOG0617|consen 126 MTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPELA 193 (264)
T ss_pred HHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceeeecChhhh
Confidence 444555555555555 45555555555555555555554 455555555555555555555555555433
No 442
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.72 E-value=7.7e-20 Score=170.44 Aligned_cols=179 Identities=30% Similarity=0.449 Sum_probs=116.3
Q ss_pred cCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEccCCcCCCCCcccccCccccccccccCCcccCCCCcccccCCCCcE
Q 001561 250 YSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFGNQFSGKLPNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHV 329 (1052)
Q Consensus 250 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~ 329 (1052)
..+++.+.|.||+|+++ .+|..++.+.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++. ..|..|+.++.|++
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhh
Confidence 34455555556666655 44555566666666666666665 55556666666666666666665 55666666666777
Q ss_pred EEecCccccC-cCCcccccCCccceeecccccccCCCCccccCCCccceeecccccccccCchhhccCCcCcEEeccCCc
Q 001561 330 LDLRNNSLTG-PIDLNFSGLSSLCTLDLATNHFSGPLPNSLSDCHDLKILSLAKNELSGQVPESFGKLTSLLFLSLSNNS 408 (1052)
Q Consensus 330 L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 408 (1052)
|||++|++.. ..|..|..++.|+.|+|++|.+. .+|..++++++|+.|.+..|.+- .+|..++.++.|++|++.+|+
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccce
Confidence 7776666653 45666767777777777777777 67777788888888888887776 677788888888888888888
Q ss_pred CCCCcccchhhccCcccceEecccc
Q 001561 409 FNHLSGTLSVLQQCKNLTTLILTKN 433 (1052)
Q Consensus 409 l~~l~~~~~~l~~l~~L~~L~L~~N 433 (1052)
++-+|..+..+.-..+-+.+.+.+|
T Consensus 185 l~vlppel~~l~l~~~k~v~r~E~N 209 (264)
T KOG0617|consen 185 LTVLPPELANLDLVGNKQVMRMEEN 209 (264)
T ss_pred eeecChhhhhhhhhhhHHHHhhhhC
Confidence 8777765544333333333334444
No 443
>PRK10345 hypothetical protein; Provisional
Probab=99.71 E-value=1e-16 Score=165.35 Aligned_cols=137 Identities=15% Similarity=0.169 Sum_probs=106.1
Q ss_pred CcccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhc-----CCCceeeeeceEeeCC---e-EE
Q 001561 773 FNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRA-----QHKNLVSLQGYCRHGN---D-RL 843 (1052)
Q Consensus 773 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~-~~ 843 (1052)
+...++||+|+||.||. .-.++.. +||++........+++.+|+++++.+ .||||++++|++.++. . ..
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34467899999999996 3234444 68988765444567799999999999 5799999999998763 3 33
Q ss_pred EEEEe--ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHH-HHHHhcCCCCeEEcCCCCCceEECC----CCCeEEe
Q 001561 844 LIYSY--MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGL-AYLHKVCEPHIVHRDVKSSNILLDE----KFEAHLA 916 (1052)
Q Consensus 844 lv~e~--~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~i~HrDlkp~Nill~~----~~~~kl~ 916 (1052)
+|+|| +++|+|.+++.+. .+++. ..++.+++.++ +|||++ +|+||||||+||+++. ++.++|+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~-----~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~Li 151 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC-----RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVC 151 (210)
T ss_pred EEecCCCCcchhHHHHHHcc-----cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEE
Confidence 78999 5579999999642 24444 35577888777 999997 9999999999999974 3479999
Q ss_pred ecccc
Q 001561 917 DFGLS 921 (1052)
Q Consensus 917 DfG~a 921 (1052)
||+-+
T Consensus 152 Dg~G~ 156 (210)
T PRK10345 152 DNIGE 156 (210)
T ss_pred ECCCC
Confidence 95444
No 444
>smart00090 RIO RIO-like kinase.
Probab=99.69 E-value=1.9e-16 Score=167.77 Aligned_cols=148 Identities=19% Similarity=0.151 Sum_probs=114.1
Q ss_pred HHHhhcCCcccCeEcccCceEEEEEE--ECCCcEEEEEEecCCchh------------------------hHHHHHHHHH
Q 001561 766 LLKSTNNFNQANIIGCGGFGLVYKAT--LTNGTKAAVKRLSGDCGQ------------------------MEREFQAEVE 819 (1052)
Q Consensus 766 ~~~~~~~~~~~~~lG~G~~g~Vy~~~--~~~g~~vavK~~~~~~~~------------------------~~~~~~~E~~ 819 (1052)
+.+....|++.+.||+|++|.||+|. ..+|+.||+|+++..... ....+.+|++
T Consensus 23 ~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 102 (237)
T smart00090 23 LLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFR 102 (237)
T ss_pred HHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHH
Confidence 33444468899999999999999998 458999999998743210 1133578999
Q ss_pred HHHhcCCCc--eeeeeceEeeCCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCC-eE
Q 001561 820 ALSRAQHKN--LVSLQGYCRHGNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPH-IV 896 (1052)
Q Consensus 820 ~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-i~ 896 (1052)
.+.++.+.. +.+++++ ...++||||++++++..+... .......++..++.|++.++++||+. + |+
T Consensus 103 ~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---g~ii 171 (237)
T smart00090 103 NLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK----DVEPEEEEEFELYDDILEEMRKLYKE---GELV 171 (237)
T ss_pred HHHHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccccc----cCCcchHHHHHHHHHHHHHHHHHHhc---CCEE
Confidence 999997533 3444432 235899999999888665422 23355666789999999999999986 8 99
Q ss_pred EcCCCCCceEECCCCCeEEeecccccccC
Q 001561 897 HRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 897 HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
||||||+||+++ ++.++++|||.|...+
T Consensus 172 H~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 172 HGDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred eCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 999999999999 8899999999987643
No 445
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.66 E-value=6.5e-16 Score=162.56 Aligned_cols=134 Identities=22% Similarity=0.324 Sum_probs=113.5
Q ss_pred CeEcccCceEEEEEEECCCcEEEEEEecCCch--------hhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 777 NIIGCGGFGLVYKATLTNGTKAAVKRLSGDCG--------QMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
+.||+|++|.||+|.+ .|..|++|+...... .....+.+|++++..++|++++....++.+.+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 578899997654321 1124578899999999999998888887777888999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccc
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRL 923 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~ 923 (1052)
++|++|.+++... .+ .+..++.+++.+++++|+. +++|||++|+||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988642 12 7889999999999999986 999999999999999 78999999999865
No 446
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.66 E-value=7.1e-16 Score=160.18 Aligned_cols=145 Identities=19% Similarity=0.113 Sum_probs=112.5
Q ss_pred HHHHhhcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCch----------------------hhHHHHHHHHHHHH
Q 001561 765 DLLKSTNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCG----------------------QMEREFQAEVEALS 822 (1052)
Q Consensus 765 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~ 822 (1052)
++......|.+.+.||+|+||.||+|...+|+.||||++..... .....+..|+.++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 34444445888899999999999999988899999998764321 01123577899999
Q ss_pred hcCCCc--eeeeeceEeeCCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC
Q 001561 823 RAQHKN--LVSLQGYCRHGNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDV 900 (1052)
Q Consensus 823 ~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDl 900 (1052)
++.|++ +++.++ ....++||||+++++|.+.... .....++.+++.++.++|+. +|+||||
T Consensus 89 ~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl 151 (198)
T cd05144 89 ALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKH---GIIHGDL 151 (198)
T ss_pred HHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHC---CCCcCCC
Confidence 998774 444443 2345899999999998765321 23467889999999999986 9999999
Q ss_pred CCCceEECCCCCeEEeecccccccCC
Q 001561 901 KSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 901 kp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
||+||++++++.++|+|||.+.....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCCC
Confidence 99999999999999999999976543
No 447
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.65 E-value=6.9e-17 Score=189.63 Aligned_cols=208 Identities=26% Similarity=0.334 Sum_probs=144.6
Q ss_pred cCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 771 NNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.+|+.++.|..|+||.||.++++ +.+++|.|+ .++.. +.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----ilRn--ilt~a~npfvv------------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----ILRN--ILTFAGNPFVV------------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcc-cccch-----hhhc--cccccCCccee-------------------
Confidence 57889999999999999999876 467788843 32211 1111 23333444444
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCC
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDT 929 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 929 (1052)
|+-...+. ..++++.+. +.+++|+|+- +|+|||+||+|.+|+.-|++|++|||+.+.......
T Consensus 136 --gDc~tllk----~~g~lPvdm--------vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~a 198 (1205)
T KOG0606|consen 136 --GDCATLLK----NIGPLPVDM--------VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLA 198 (1205)
T ss_pred --chhhhhcc----cCCCCcchh--------hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhcc
Confidence 33222232 222333322 7789999985 999999999999999999999999999876322110
Q ss_pred ------------e--eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhh
Q 001561 930 ------------H--VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKS 995 (1052)
Q Consensus 930 ------------~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 995 (1052)
+ ....++|||.|.|||++....|...+|+|++|+|+||.+.|+.||.+ ++.++++..+....-
T Consensus 199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffG---dtpeelfg~visd~i 275 (1205)
T KOG0606|consen 199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG---DTPEELFGQVISDDI 275 (1205)
T ss_pred chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccC---CCHHHHHhhhhhhhc
Confidence 0 11235899999999999999999999999999999999999999964 444455443332211
Q ss_pred cccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCC
Q 001561 996 EKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPF 1036 (1052)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 1036 (1052)
.|.+..+....++++++.+.++.+|.+|--
T Consensus 276 -----------~wpE~dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 276 -----------EWPEEDEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred -----------cccccCcCCCHHHHHHHHHHHHhChHhhcc
Confidence 111122233347889999999999999963
No 448
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.65 E-value=6e-16 Score=162.79 Aligned_cols=195 Identities=19% Similarity=0.222 Sum_probs=133.3
Q ss_pred CCCceeeeeceEee---------------------------CCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHH
Q 001561 825 QHKNLVSLQGYCRH---------------------------GNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIA 877 (1052)
Q Consensus 825 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~ 877 (1052)
+|||||+++++|.+ +...|+||...+. +|..++.. ...+...+.-|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~-----~~~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT-----RHRSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhc-----CCCchHHHHHHH
Confidence 69999999987643 2245788776643 67777653 235566778889
Q ss_pred HHHHHHHHHHHhcCCCCeEEcCCCCCceEEC--CC--CCeEEeecccccccCCCC-----CeeeecccccccccCccccC
Q 001561 878 QGAARGLAYLHKVCEPHIVHRDVKSSNILLD--EK--FEAHLADFGLSRLLRPYD-----THVTTDLVGTLGYIPPEYSQ 948 (1052)
Q Consensus 878 ~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~--~~--~~~kl~DfG~a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~ 948 (1052)
.|+++|+.|||.+ +|+|||+|++|||+. +| -.+.|+|||++---+... .....+.-|...-||||+..
T Consensus 348 aQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 9999999999998 999999999999994 33 346889999985422110 01112335677899999865
Q ss_pred CcC------CCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHH
Q 001561 949 TLT------ATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEI 1022 (1052)
Q Consensus 949 ~~~------~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 1022 (1052)
..+ ...|+|.|+.|-+.||+++...||.... +-.-+... +.+. .....++.+...+.++
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG-em~L~~r~-----Yqe~---------qLPalp~~vpp~~rql 489 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG-EMLLDTRT-----YQES---------QLPALPSRVPPVARQL 489 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccc-hheechhh-----hhhh---------hCCCCcccCChHHHHH
Confidence 432 2358999999999999999999997521 11111111 0000 1112233344578899
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 001561 1023 ACKCIDQDPRRRPFIEEVVTW 1043 (1052)
Q Consensus 1023 i~~cl~~dP~~RPs~~evl~~ 1043 (1052)
+...+++||.+|++..-....
T Consensus 490 V~~lL~r~pskRvsp~iAANv 510 (598)
T KOG4158|consen 490 VFDLLKRDPSKRVSPNIAANV 510 (598)
T ss_pred HHHHhcCCccccCCccHHHhH
Confidence 999999999999987655443
No 449
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.64 E-value=6.4e-17 Score=178.29 Aligned_cols=174 Identities=25% Similarity=0.373 Sum_probs=131.4
Q ss_pred eEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccc
Q 001561 841 DRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGL 920 (1052)
Q Consensus 841 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~ 920 (1052)
..|+.|++++..+|.+|+.... .....++.....++.|++.|+.| . +.+|||+||.||....+.++||.|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~-~~e~~s~s~~~~~~~q~~~~~~y--k----~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRR-TGEERSLSLMLDIFKQIAPAVEY--K----GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCC-cccccchhHHHHHHHhhccchhh--c----cchhhhccccccccccchhhhhhhhhh
Confidence 4689999999999999997544 34556888999999999999999 2 899999999999999999999999999
Q ss_pred ccccCCCC-----CeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHc-CCCCCcccCCCCchhHHHHHHHhh
Q 001561 921 SRLLRPYD-----THVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLT-GRRPVEVCKGKNCRDLVSWVFQMK 994 (1052)
Q Consensus 921 a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~ 994 (1052)
........ ...++..+||..||+||.+.+..|+.++||||+|++++|++. =..+|+. ... ....
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er---------~~t-~~d~ 472 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER---------IAT-LTDI 472 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH---------HHh-hhhh
Confidence 98876544 234456789999999999999999999999999999999996 2222221 000 0001
Q ss_pred hcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 001561 995 SEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEV 1040 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 1040 (1052)
+. ..+++..+.+++ +-..++.+++.+.|.+||++.++
T Consensus 473 r~----g~ip~~~~~d~p-----~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 473 RD----GIIPPEFLQDYP-----EEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hc----CCCChHHhhcCc-----HHHHHHHHhcCCCcccCchHHHH
Confidence 11 111222222222 23578899999999999954443
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.64 E-value=8.7e-16 Score=159.97 Aligned_cols=131 Identities=25% Similarity=0.364 Sum_probs=107.0
Q ss_pred eEcccCceEEEEEEECCCcEEEEEEecCCc--------hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEec
Q 001561 778 IIGCGGFGLVYKATLTNGTKAAVKRLSGDC--------GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYM 849 (1052)
Q Consensus 778 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 849 (1052)
.||+|+||.||+|.+ +|..|++|+..... .....++.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999986 47889999865321 111255778999999999887766666666677789999999
Q ss_pred cCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 850 ENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 850 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
+|++|.+++... .. .++.+++++++++|+. +++|||++|+||+++ ++.++++|||.+...
T Consensus 80 ~g~~l~~~~~~~----~~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEG----ND-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhc----HH-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 999998877531 10 7889999999999986 999999999999999 889999999998753
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.63 E-value=1.5e-15 Score=181.93 Aligned_cols=139 Identities=21% Similarity=0.252 Sum_probs=112.0
Q ss_pred hcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCc-------hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeE
Q 001561 770 TNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDC-------GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDR 842 (1052)
Q Consensus 770 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 842 (1052)
...|...+.||+|+||+||+|.+.+...++.++..+.. ....+.+.+|++++++++|++++....++.+....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 34456688999999999999987644433333232211 11235678999999999999999888888877788
Q ss_pred EEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 843 LLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 843 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
++||||+++++|.+++. .+..++.+++++++|||+. +++|||+||+||++ +++.++|+|||+++
T Consensus 412 ~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred EEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 99999999999988774 3467899999999999986 99999999999999 67899999999997
Q ss_pred cc
Q 001561 923 LL 924 (1052)
Q Consensus 923 ~~ 924 (1052)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 53
No 452
>PLN03150 hypothetical protein; Provisional
Probab=99.61 E-value=9.8e-16 Score=185.10 Aligned_cols=116 Identities=39% Similarity=0.634 Sum_probs=103.6
Q ss_pred CCeeeeecCcccccCCcccccccccceecccCceeeecCCCCcccccCcCeeeCCCCcCCCCCCccccCccccCeeeecc
Q 001561 559 PPSVFLSNNRINGTIPPEIGQLKHLHVLDLSRNNITGTIPSSISEIRNLEVLDLSSNDLHGSIPGSFEKLTFLSKFSVAN 638 (1052)
Q Consensus 559 ~~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~l~l~~ 638 (1052)
...|+|++|.+.|.+|.+++.|++|+.|+|++|+|+|.+|..++.+++|+.|||++|+++|.+|..++++++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCc--cCCCCCCcccCCCCCcCCC-CCCCC
Q 001561 639 NHLQGTIPTGGQ--FYSFPNSSFEGNPGLCGEI-DSPCD 674 (1052)
Q Consensus 639 N~l~g~~p~~~~--~~~~~~~~~~gn~~lcg~~-~~~~~ 674 (1052)
|+|+|.+|..-. +.......+.||+++||.+ ...|.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 999999997522 2334456789999999963 35564
No 453
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.56 E-value=3.2e-14 Score=140.84 Aligned_cols=134 Identities=19% Similarity=0.165 Sum_probs=114.3
Q ss_pred cCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCC--CceeeeeceEeeCCeEEEEEEeccCCC
Q 001561 776 ANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQH--KNLVSLQGYCRHGNDRLLIYSYMENGS 853 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~ 853 (1052)
.+.||+|.++.||++...+ ..+++|....... ...+.+|+.+++.++| ..+++++++...++..+++|||++++.
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 5679999999999999764 7899999865533 4568899999999976 589999988888788999999999887
Q ss_pred hhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccc
Q 001561 854 LDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRL 923 (1052)
Q Consensus 854 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~ 923 (1052)
+..+ +......++.+++++++++|....++++|+|++|+||++++.+.++++|||.++.
T Consensus 80 ~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 6543 4566778899999999999986456799999999999999999999999999864
No 454
>PLN03150 hypothetical protein; Provisional
Probab=99.55 E-value=2.1e-14 Score=173.62 Aligned_cols=134 Identities=31% Similarity=0.524 Sum_probs=109.9
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCCCCCcCCCCCCc----eeeeeeeCCCCCCCCCCcEEEEEecCCCCcccCCccccCCcC
Q 001561 36 QSCDPSDLLALKEFAGNLTNGSIITSWSNESMCC----QWDGVVCGHGSTGSNAGRVTMLILPRKGLKGIIPRSLGHLNQ 111 (1052)
Q Consensus 36 ~~~~~~~~~aLl~~k~~~~~~~~l~sw~~~~~~c----~w~gv~C~~~~~~~~~~~v~~l~L~~~~l~g~~~~~l~~l~~ 111 (1052)
.++.++|..||+++|..+.... ..+|.+ .+|| .|.||.|+.... .....|+.|+|+++++.|.+|.+++.+++
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~-~~~W~g-~~C~p~~~~w~Gv~C~~~~~-~~~~~v~~L~L~~n~L~g~ip~~i~~L~~ 443 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPL-RFGWNG-DPCVPQQHPWSGADCQFDST-KGKWFIDGLGLDNQGLRGFIPNDISKLRH 443 (623)
T ss_pred cccCchHHHHHHHHHHhcCCcc-cCCCCC-CCCCCcccccccceeeccCC-CCceEEEEEECCCCCccccCCHHHhCCCC
Confidence 3567889999999999986543 258975 4553 799999953211 11236999999999999999999999999
Q ss_pred CCeEecCCCCCCCCCcccccCCCCccEEeccCCcccCcccccccccCCccEEEccCcccCC
Q 001561 112 LKLLDLSCNHLEGVVPVELSNLKQLEVLDLSHNMLSGPVSGMLAGLNLIQSLNVSSNSFNG 172 (1052)
Q Consensus 112 L~~L~Ls~n~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 172 (1052)
|+.|+|++|++.|.+|..++.+++|++|||++|++++.+|..++.+++|++|+|++|.+++
T Consensus 444 L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g 504 (623)
T PLN03150 444 LQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSG 504 (623)
T ss_pred CCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccc
Confidence 9999999999999999999999999999999999999998888877777766666666554
No 455
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.53 E-value=3.7e-14 Score=146.08 Aligned_cols=137 Identities=20% Similarity=0.201 Sum_probs=98.6
Q ss_pred cCeEcccCceEEEEEEECCCcEEEEEEecCCchhh---HHH---------------------HHHHHHHHHhcCCCc--e
Q 001561 776 ANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQM---ERE---------------------FQAEVEALSRAQHKN--L 829 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~---~~~---------------------~~~E~~~l~~l~h~n--i 829 (1052)
.+.||+|+||+||+|...+++.||||++....... ... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998789999999887532111 111 135666666664433 3
Q ss_pred eeeeceEeeCCeEEEEEEeccCCChhh-hhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEEC
Q 001561 830 VSLQGYCRHGNDRLLIYSYMENGSLDY-WLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLD 908 (1052)
Q Consensus 830 v~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~ 908 (1052)
.+.+++ ...++||||++++.+.. .+.... .. .++..++.+++.++.++|.. .+|+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYRE--AGLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEEEE
Confidence 444432 24589999999965422 121110 11 56788999999999999982 3999999999999999
Q ss_pred CCCCeEEeecccccccC
Q 001561 909 EKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 909 ~~~~~kl~DfG~a~~~~ 925 (1052)
++.++++|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8999999999997654
No 456
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=2.4e-15 Score=178.81 Aligned_cols=254 Identities=26% Similarity=0.329 Sum_probs=188.1
Q ss_pred cCCcccCeEcccCceEEEEEEECC--CcEEEEEEecCCc--hhhHHHHHHHHHHHHhcC-CCceeeeeceEeeCCeEEEE
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTN--GTKAAVKRLSGDC--GQMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGNDRLLI 845 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~--g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 845 (1052)
..|...+.||+|+|+.|-.+.... ...+|+|.+.... ....+....|..+-..+. |+|++.+++...+.+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 346777889999999998886543 3456666655432 222334455777777776 99999999999999999999
Q ss_pred EEeccCCChhhhhhcccCCcc-ccCHHHHHHHHHHHHHHHHHHH-hcCCCCeEEcCCCCCceEECCCC-CeEEeeccccc
Q 001561 846 YSYMENGSLDYWLHESVDKDS-VLKWDVRLKIAQGAARGLAYLH-KVCEPHIVHRDVKSSNILLDEKF-EAHLADFGLSR 922 (1052)
Q Consensus 846 ~e~~~~g~L~~~l~~~~~~~~-~l~~~~~~~i~~~i~~~l~~LH-~~~~~~i~HrDlkp~Nill~~~~-~~kl~DfG~a~ 922 (1052)
.||.+++++.+.+.. .+. ..+...+-.++.|+..++.|+| . .++.|||+||+|.+++..+ ..+++|||+|.
T Consensus 100 ~~~s~g~~~f~~i~~---~~~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISH---PDSTGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred cCccccccccccccc---CCccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhc
Confidence 999999999887731 222 4566777889999999999999 6 4999999999999999999 99999999999
Q ss_pred ccCC-C-CCeeeecccc-cccccCccccCCc-CCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccc
Q 001561 923 LLRP-Y-DTHVTTDLVG-TLGYIPPEYSQTL-TATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKR 998 (1052)
Q Consensus 923 ~~~~-~-~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
.+.. . ........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++...... ..+..|....
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-~~~~~~~~~~----- 247 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-GRYSSWKSNK----- 247 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-ccceeecccc-----
Confidence 8766 2 2333445688 9999999988774 55678999999999999999999987433221 1222222111
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 999 EVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.......+.. ......++..+++..+|..|.+.+++..
T Consensus 248 --~~~~~~~~~~----~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 248 --GRFTQLPWNS----ISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred --cccccCcccc----CChhhhhcccccccCCchhccccccccc
Confidence 0001111111 2235678888999999999999888754
No 457
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.49 E-value=2e-13 Score=145.03 Aligned_cols=136 Identities=21% Similarity=0.223 Sum_probs=105.2
Q ss_pred cCeEc-ccCceEEEEEEECCCcEEEEEEecCCc-------------hhhHHHHHHHHHHHHhcCCCce--eeeeceEeeC
Q 001561 776 ANIIG-CGGFGLVYKATLTNGTKAAVKRLSGDC-------------GQMEREFQAEVEALSRAQHKNL--VSLQGYCRHG 839 (1052)
Q Consensus 776 ~~~lG-~G~~g~Vy~~~~~~g~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 839 (1052)
..+|| .|+.|+||.+... +..+|+|++.... ......+.+|++++.+++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45788 8999999999875 7789999875321 1223457889999999998875 6677765432
Q ss_pred C----eEEEEEEeccC-CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeE
Q 001561 840 N----DRLLIYSYMEN-GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAH 914 (1052)
Q Consensus 840 ~----~~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~k 914 (1052)
. ..++||||++| .+|.+++.. ..++.. .+.+++.++++||+. ||+||||||+|||++.++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE-----APLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc-----CCCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 2 23599999997 688888753 234443 356899999999986 999999999999999999999
Q ss_pred Eeeccccccc
Q 001561 915 LADFGLSRLL 924 (1052)
Q Consensus 915 l~DfG~a~~~ 924 (1052)
++|||.++..
T Consensus 183 LIDfg~~~~~ 192 (239)
T PRK01723 183 LIDFDRGELR 192 (239)
T ss_pred EEECCCcccC
Confidence 9999998753
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.44 E-value=5.6e-15 Score=162.58 Aligned_cols=160 Identities=31% Similarity=0.495 Sum_probs=89.1
Q ss_pred CCccccCCCcccEEEccCCccccCcchhhhcCCCCcEEeCcCccCCCCCChhhccCCCCCeEeccCCcccccCCcchhhh
Q 001561 439 IPENVGGFESLMVLALGNCGLKGHIPVWLLRCKKLQVLDLSWNHFDGNIPPWIGQMENLFYLDFSNNTLTGEIPKSLTEL 518 (1052)
Q Consensus 439 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 518 (1052)
+|..+..+..|+.+.|.+|.+. .+|..++++..|.+|||+.|+++ .+|..++.|+ |+.|-+++|+++ .+|..++.+
T Consensus 90 lp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~ 165 (722)
T KOG0532|consen 90 LPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLL 165 (722)
T ss_pred CchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccc
Confidence 3444444444555555555554 45555555555555555555555 4555555554 555555555554 344444433
Q ss_pred hhhcccCCCCCCCCCCCCccceeeccccCCCcCCCCCCCCCCeeeeecCcccccCCcccccccccceecccCceeeecCC
Q 001561 519 KSLISSNCTSSNPTASAGIPLYVKHNRSTNGLPYNQASSFPPSVFLSNNRINGTIPPEIGQLKHLHVLDLSRNNITGTIP 598 (1052)
Q Consensus 519 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip 598 (1052)
..| ..+|.+.|.+. .+|..+++|.+|+.|++..|++. .+|
T Consensus 166 ~tl--------------------------------------~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp 205 (722)
T KOG0532|consen 166 PTL--------------------------------------AHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLP 205 (722)
T ss_pred hhH--------------------------------------HHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCC
Confidence 333 12444555555 45666666666666666666666 556
Q ss_pred CCcccccCcCeeeCCCCcCCCCCCccccCccccCeeeecccccccC
Q 001561 599 SSISEIRNLEVLDLSSNDLHGSIPGSFEKLTFLSKFSVANNHLQGT 644 (1052)
Q Consensus 599 ~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~ 644 (1052)
.+++.| .|..||+|.|+++ .||-.|.+|..|++|-|.+|.|+.+
T Consensus 206 ~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSP 249 (722)
T KOG0532|consen 206 EELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSP 249 (722)
T ss_pred HHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCC
Confidence 666633 4666666666666 5666666666666666666666643
No 459
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.36 E-value=3.2e-12 Score=147.82 Aligned_cols=142 Identities=20% Similarity=0.219 Sum_probs=101.2
Q ss_pred cCeEcccCceEEEEEEECCCcEEEEEEecCCchhh----------------------------------------HHHHH
Q 001561 776 ANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQM----------------------------------------EREFQ 815 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~----------------------------------------~~~~~ 815 (1052)
.+.||.|++|.||+|++.+|+.||||+.+...... +-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36899999999999999999999999986532110 01244
Q ss_pred HHHHHHHhcC----CCceeeeeceEe-eCCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHH-HHHHHHh
Q 001561 816 AEVEALSRAQ----HKNLVSLQGYCR-HGNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAAR-GLAYLHK 889 (1052)
Q Consensus 816 ~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~-~l~~LH~ 889 (1052)
+|.+.+.+++ |.+-+.+-..+. ..+..++||||++|+++.++..... ... .+..++..++. .+..+|.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~---~~~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE---AGL---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh---cCC---CHHHHHHHHHHHHHHHHHh
Confidence 5666666552 333333333332 2456799999999999988764321 111 23456666665 4677887
Q ss_pred cCCCCeEEcCCCCCceEECCCCCeEEeecccccccCC
Q 001561 890 VCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 890 ~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
. |++|+|+||.||+++++++++++|||++..+.+
T Consensus 276 ~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 D---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred C---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 5 999999999999999999999999999987653
No 460
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.32 E-value=5.9e-14 Score=154.61 Aligned_cols=192 Identities=27% Similarity=0.399 Sum_probs=94.3
Q ss_pred EEEcccccCCCCCCccccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEccCCcCCCCCcccccCccccccccccCCc
Q 001561 233 QLHVDNNLLGGDLPDSLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFGNQFSGKLPNVLGNLTQLEFFVAHSNS 312 (1052)
Q Consensus 233 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 312 (1052)
..||+.|++. .+|..+..+..|+.|.|..|.+. .+|..+.++..|++|||+.|+++ ..|..+..|+ |+.|.+++|+
T Consensus 79 ~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNk 154 (722)
T KOG0532|consen 79 FADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNK 154 (722)
T ss_pred hhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCc
Confidence 3444444444 34444444444444444444444 44444444555555555555444 3444444332 4444444444
Q ss_pred ccCCCCcccccCCCCcEEEecCccccCcCCcccccCCccceeecccccccCCCCccccCCCccceeecccccccccCchh
Q 001561 313 FSGPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPLPNSLSDCHDLKILSLAKNELSGQVPES 392 (1052)
Q Consensus 313 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 392 (1052)
++ .+|..++.+.+|..||.+.|.+. ..|..++++.+|+.|.+..|++. .+|..++.+ .|..||+++|+++ .+|-.
T Consensus 155 l~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~ 229 (722)
T KOG0532|consen 155 LT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVD 229 (722)
T ss_pred cc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchh
Confidence 44 33444444455555555555554 23334455555555555555555 344445433 4555666666665 55556
Q ss_pred hccCCcCcEEeccCCcCCCCcccchhhccCcccceEecccc
Q 001561 393 FGKLTSLLFLSLSNNSFNHLSGTLSVLQQCKNLTTLILTKN 433 (1052)
Q Consensus 393 ~~~l~~L~~L~L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N 433 (1052)
|.+|+.|++|-|.+|.++.-|..+-.-+...-.++|+..-+
T Consensus 230 fr~m~~Lq~l~LenNPLqSPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 230 FRKMRHLQVLQLENNPLQSPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred hhhhhhheeeeeccCCCCCChHHHHhccceeeeeeecchhc
Confidence 66666666666666666555444332233333344444444
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.32 E-value=2e-12 Score=149.93 Aligned_cols=193 Identities=35% Similarity=0.484 Sum_probs=83.9
Q ss_pred eeccCcccccccccCCCCCCCCEEEcccccCCCCCCccccCCC-CCcEEEcccCcCCchhhhhhcCCCCCcEEEccCCcC
Q 001561 211 LDLSMNHFMGSLQGLDHSPSLKQLHVDNNLLGGDLPDSLYSMS-SLQHVSLSVNNFSGQLSEKISNLTSLRHLIIFGNQF 289 (1052)
Q Consensus 211 L~Ls~n~l~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 289 (1052)
++++.|.+......+...+.++.|++.+|.++ .++.....+. +|+.|++++|++. .+|..+..+++|+.|++++|++
T Consensus 98 l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l 175 (394)
T COG4886 98 LDLNLNRLRSNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDL 175 (394)
T ss_pred eeccccccccCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchh
Confidence 44455544333333333344555555555554 3344444442 4555555555554 3333444445555555555554
Q ss_pred CCCCcccccCccccccccccCCcccCCCCcccccCCCCcEEEecCccccCcCCcccccCCccceeecccccccCCCCccc
Q 001561 290 SGKLPNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPLPNSL 369 (1052)
Q Consensus 290 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 369 (1052)
+ .+|...+.+++|+.|++++|+++ .+|........ |++|.+++|++. ..+..+
T Consensus 176 ~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~------------------------L~~l~~~~N~~~-~~~~~~ 228 (394)
T COG4886 176 S-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSA------------------------LEELDLSNNSII-ELLSSL 228 (394)
T ss_pred h-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhh------------------------hhhhhhcCCcce-ecchhh
Confidence 4 33333334444444444444444 22222222233 444444444322 233344
Q ss_pred cCCCccceeecccccccccCchhhccCCcCcEEeccCCcCCCCcccchhhccCcccceEeccccccCc
Q 001561 370 SDCHDLKILSLAKNELSGQVPESFGKLTSLLFLSLSNNSFNHLSGTLSVLQQCKNLTTLILTKNFVGE 437 (1052)
Q Consensus 370 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N~l~~ 437 (1052)
.++.++..+.+.+|++. ..+..++.+++++.|++++|.++.++. +....+++.|++++|.+..
T Consensus 229 ~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~----~~~~~~l~~L~~s~n~~~~ 291 (394)
T COG4886 229 SNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSISS----LGSLTNLRELDLSGNSLSN 291 (394)
T ss_pred hhcccccccccCCceee-eccchhccccccceecccccccccccc----ccccCccCEEeccCccccc
Confidence 44444444444444444 223444444444555555554444432 3333444444444444433
No 462
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.31 E-value=2.2e-12 Score=133.37 Aligned_cols=204 Identities=20% Similarity=0.294 Sum_probs=143.0
Q ss_pred HHHHHhcCCCceeeeeceEeeC-----CeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCC
Q 001561 818 VEALSRAQHKNLVSLQGYCRHG-----NDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCE 892 (1052)
Q Consensus 818 ~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 892 (1052)
++-+-.+.|-|+|+++.|+.+. .+...+.|||..|++..+|++.......+....-.+|.-||..||.|||+. +
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 3445556799999999998654 346789999999999999998777777788888889999999999999994 9
Q ss_pred CCeEEcCCCCCceEECCCCCeEEeecccccccCCC---CCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHH
Q 001561 893 PHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPY---DTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELL 969 (1052)
Q Consensus 893 ~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell 969 (1052)
++|+|+++..+-|++..+|-+|+.---........ .........+-++|.|||.-..-..+.++|||+||+...||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 99999999999999999999988421111100000 001111224678999999887778888999999999999998
Q ss_pred cCCCC-CcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 970 TGRRP-VEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 970 tG~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
.|..- -........++..+.+.. ..-+ . .=.+++.+|++..|..||+|++++.
T Consensus 277 ilEiq~tnseS~~~~ee~ia~~i~--------~len-----~-------lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIANVII--------GLEN-----G-------LQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred HheeccCCCcceeehhhhhhhhee--------eccC-----c-------cccCcCcccccCCCCCCcchhhhhc
Confidence 87653 111000000000000000 0000 0 1136788999999999999998764
No 463
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.31 E-value=2.2e-12 Score=149.51 Aligned_cols=200 Identities=30% Similarity=0.395 Sum_probs=154.4
Q ss_pred cEEEecCCccCCccchhhhhcccccceeeccCcccccccccCCCCC-CCCEEEcccccCCCCCCccccCCCCCcEEEccc
Q 001561 184 AVFNISNNSFTGKLNSRIWSASKEIQILDLSMNHFMGSLQGLDHSP-SLKQLHVDNNLLGGDLPDSLYSMSSLQHVSLSV 262 (1052)
Q Consensus 184 ~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~l~~~~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 262 (1052)
..++++.|.+...+.. ....+.++.|++.+|.++.++......+ +|+.|++++|.+. .+|..+..+++|+.|++++
T Consensus 96 ~~l~~~~~~~~~~~~~--~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 96 PSLDLNLNRLRSNISE--LLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred ceeeccccccccCchh--hhcccceeEEecCCcccccCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 4688888887433222 2344789999999999999999888885 9999999999999 5667899999999999999
Q ss_pred CcCCchhhhhhcCCCCCcEEEccCCcCCCCCcccccCccccccccccCCcccCCCCcccccCCCCcEEEecCccccCcCC
Q 001561 263 NNFSGQLSEKISNLTSLRHLIIFGNQFSGKLPNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLDLRNNSLTGPID 342 (1052)
Q Consensus 263 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 342 (1052)
|+++ .+|...+.+++|+.|++++|+++ .+|...+....|+++.+++|.+. ..+..+.+++++..+.+.+|++... +
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~-~ 248 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL-P 248 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec-c
Confidence 9999 66666668999999999999999 77877777888999999999644 3556677788888888888877643 4
Q ss_pred cccccCCccceeecccccccCCCCccccCCCccceeecccccccccCchh
Q 001561 343 LNFSGLSSLCTLDLATNHFSGPLPNSLSDCHDLKILSLAKNELSGQVPES 392 (1052)
Q Consensus 343 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 392 (1052)
..++.++++++|++++|.++.. +. ++.+.+++.|++++|.++...|..
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~i-~~-~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISSI-SS-LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred chhccccccceecccccccccc-cc-ccccCccCEEeccCccccccchhh
Confidence 4556666677777777777633 32 666667777777777666554443
No 464
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=5.5e-12 Score=142.75 Aligned_cols=247 Identities=23% Similarity=0.244 Sum_probs=179.6
Q ss_pred CCcccCeEcc--cCceEEEEEEE---CCCcEEEEEEecCCc--hhhHHHHHHHHHHHHhcC-CCceeeeeceEeeCCeEE
Q 001561 772 NFNQANIIGC--GGFGLVYKATL---TNGTKAAVKRLSGDC--GQMEREFQAEVEALSRAQ-HKNLVSLQGYCRHGNDRL 843 (1052)
Q Consensus 772 ~~~~~~~lG~--G~~g~Vy~~~~---~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 843 (1052)
.|...+.+|. |.+|.||.+.. .++..+|+|+-+... +.....-.+|+...++++ |++.++.+..+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 3566788999 99999999976 368899999844322 233334466777777774 999999888999999999
Q ss_pred EEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHH----HHHHHHhcCCCCeEEcCCCCCceEECCC-CCeEEeec
Q 001561 844 LIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAAR----GLAYLHKVCEPHIVHRDVKSSNILLDEK-FEAHLADF 918 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~i~HrDlkp~Nill~~~-~~~kl~Df 918 (1052)
+-+|++. .++.++.+.. ...++....+.+..+..+ |+.++|+. +++|-|+||.||+...+ ...+++||
T Consensus 195 iqtE~~~-~sl~~~~~~~---~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTP---CNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeecccc-chhHHhhhcc---cccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 9999885 6777766642 233566777777788888 99999996 99999999999999999 88999999
Q ss_pred ccccccCCCCCe----eeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhh
Q 001561 919 GLSRLLRPYDTH----VTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMK 994 (1052)
Q Consensus 919 G~a~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~ 994 (1052)
|+...+....-. ......|...|++||..++ .++.+.|+|++|.+..+..+|..+........ |.. .
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~------W~~--~ 338 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSS------WSQ--L 338 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCC------ccc--c
Confidence 999988754411 1222367789999998766 67889999999999999998877654221111 100 0
Q ss_pred hcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001561 995 SEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVT 1042 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1042 (1052)
+. ..+..++......++...+..|++.+|..|++.+.+..
T Consensus 339 r~--------~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 339 RQ--------GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cc--------ccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 00 00111222222334556889999999999999888764
No 465
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.22 E-value=3.8e-11 Score=121.51 Aligned_cols=131 Identities=18% Similarity=0.144 Sum_probs=96.7
Q ss_pred cCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCcee-eeeceEeeCCeEEEEEEeccCCCh
Q 001561 776 ANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLV-SLQGYCRHGNDRLLIYSYMENGSL 854 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~g~L 854 (1052)
.+.++.|.++.||++... +..|++|....... ....+..|+++++.+.+.+++ +++.+. .+..++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 457899999999999875 78899998765432 223467899999988665544 344332 3345899999999876
Q ss_pred hhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcC--CCCeEEcCCCCCceEECCCCCeEEeecccccc
Q 001561 855 DYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVC--EPHIVHRDVKSSNILLDEKFEAHLADFGLSRL 923 (1052)
Q Consensus 855 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~ 923 (1052)
.+. . .....++.+++++++.||+.. ...++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~--~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTE--D----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc--c----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 543 0 011345678999999999862 12369999999999999 67899999999853
No 466
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.22 E-value=2e-11 Score=142.33 Aligned_cols=145 Identities=15% Similarity=0.171 Sum_probs=95.8
Q ss_pred cCCcccCeEcccCceEEEEEEECC-CcEEEEEEecCCchh----------------------------------hHH---
Q 001561 771 NNFNQANIIGCGGFGLVYKATLTN-GTKAAVKRLSGDCGQ----------------------------------MER--- 812 (1052)
Q Consensus 771 ~~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~----------------------------------~~~--- 812 (1052)
.+|+. +.||.|++|.||+|++++ |+.||||+.++...+ ..+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34666 789999999999999887 999999999754210 011
Q ss_pred ---HHHHHHHHHHhcC----CCceeeeeceEee-CCeEEEEEEeccCCChhhhh--hcccCCccccCHHHHHHHHHHHHH
Q 001561 813 ---EFQAEVEALSRAQ----HKNLVSLQGYCRH-GNDRLLIYSYMENGSLDYWL--HESVDKDSVLKWDVRLKIAQGAAR 882 (1052)
Q Consensus 813 ---~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~l~~~~~~~i~~~i~~ 882 (1052)
++.+|+..+.+++ +...+.+-.++.+ ....++||||++|+.+.++- .........+....+..++.|+.
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif- 277 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF- 277 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-
Confidence 2344554444442 4444444444433 45678999999999987642 21100111233333333333333
Q ss_pred HHHHHHhcCCCCeEEcCCCCCceEECCCC----CeEEeecccccccCC
Q 001561 883 GLAYLHKVCEPHIVHRDVKSSNILLDEKF----EAHLADFGLSRLLRP 926 (1052)
Q Consensus 883 ~l~~LH~~~~~~i~HrDlkp~Nill~~~~----~~kl~DfG~a~~~~~ 926 (1052)
. .|++|+|+||.||+++.++ +++++|||++..+.+
T Consensus 278 ------~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 ------R---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ------h---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3 3999999999999999988 999999999987754
No 467
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.18 E-value=7e-10 Score=126.65 Aligned_cols=168 Identities=18% Similarity=0.207 Sum_probs=128.2
Q ss_pred EECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEeccCCChhhhhhcccCCccccCH
Q 001561 791 TLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSYMENGSLDYWLHESVDKDSVLKW 870 (1052)
Q Consensus 791 ~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~ 870 (1052)
+..++.+|.|...+...........+-++.++.++||+|+++++.++..+..|+|+|-+. .|..++.+ ++.
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-------l~~ 103 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-------LGK 103 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-------hHH
Confidence 344788888888776655445556778889999999999999999999999999999875 35555553 335
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCeeeecccccccccCccccCCc
Q 001561 871 DVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTL 950 (1052)
Q Consensus 871 ~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 950 (1052)
......+.||+.||.|||.. .+++|++|.-+.|++++.|+.||++|.++........ ......--..|..|+.+...
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s 180 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPS 180 (690)
T ss_pred HHHHHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCcc
Confidence 66777889999999999974 6999999999999999999999999998865433221 11111222356777754433
Q ss_pred CCCcccchHHHHHHHHHHHcCC
Q 001561 951 TATCRGDVYSFGVVLLELLTGR 972 (1052)
Q Consensus 951 ~~~~~~DvwslGvil~elltG~ 972 (1052)
. -..|.|.||++++|++.|.
T Consensus 181 ~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 181 E--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred c--cchhhhhHHHHHHHHhCcc
Confidence 2 3579999999999999993
No 468
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.16 E-value=3.5e-12 Score=133.58 Aligned_cols=138 Identities=22% Similarity=0.345 Sum_probs=106.2
Q ss_pred CCCccceeecccccccccC----chhhccCCcCcEEeccCCcCCCCc--ccchhhccCcccceEeccccccCcc----CC
Q 001561 371 DCHDLKILSLAKNELSGQV----PESFGKLTSLLFLSLSNNSFNHLS--GTLSVLQQCKNLTTLILTKNFVGEE----IP 440 (1052)
Q Consensus 371 ~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~l~--~~~~~l~~l~~L~~L~L~~N~l~~~----~p 440 (1052)
.-++|+++..++|++.... ...|...+.|+.+.++.|.|..-- .....+..|++|+.|||++|.++.. +.
T Consensus 155 ~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~La 234 (382)
T KOG1909|consen 155 SKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALA 234 (382)
T ss_pred CCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHH
Confidence 3467899999999886432 245667789999999999886421 1235678899999999999998654 44
Q ss_pred ccccCCCcccEEEccCCccccCcchhhh-----cCCCCcEEeCcCccCCCC----CChhhccCCCCCeEeccCCccc
Q 001561 441 ENVGGFESLMVLALGNCGLKGHIPVWLL-----RCKKLQVLDLSWNHFDGN----IPPWIGQMENLFYLDFSNNTLT 508 (1052)
Q Consensus 441 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 508 (1052)
+.+..++.|+.|++++|.++......+. ..++|++|.|.+|.++.. +-.++...+.|..|+|++|++.
T Consensus 235 kaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 235 KALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 5677889999999999999865544332 368999999999999732 3345667899999999999994
No 469
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.15 E-value=6.2e-10 Score=112.71 Aligned_cols=138 Identities=17% Similarity=0.156 Sum_probs=100.0
Q ss_pred cCeEcccCceEEEEEEECC-------CcEEEEEEecCCc----------------------hhhHHHH----HHHHHHHH
Q 001561 776 ANIIGCGGFGLVYKATLTN-------GTKAAVKRLSGDC----------------------GQMEREF----QAEVEALS 822 (1052)
Q Consensus 776 ~~~lG~G~~g~Vy~~~~~~-------g~~vavK~~~~~~----------------------~~~~~~~----~~E~~~l~ 822 (1052)
...||.|--+.||.|...+ +..+|||+.+... ....+.+ ++|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999997543 4789999875210 0112233 38999999
Q ss_pred hcCC--CceeeeeceEeeCCeEEEEEEeccCCChhh-hhhcccCCccccCHHHHHHHHHHHHHHHHHH-HhcCCCCeEEc
Q 001561 823 RAQH--KNLVSLQGYCRHGNDRLLIYSYMENGSLDY-WLHESVDKDSVLKWDVRLKIAQGAARGLAYL-HKVCEPHIVHR 898 (1052)
Q Consensus 823 ~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~i~Hr 898 (1052)
++.. -++.+++++ ...++||||+.+..+.. .+. ...++.++...+..+++.++.+| |.. +++|+
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-----d~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHG 149 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-----DAKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHA 149 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh-----ccccCHHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 9953 456666654 45689999998754321 222 22344556677889999999999 775 99999
Q ss_pred CCCCCceEECCCCCeEEeecccccccCC
Q 001561 899 DVKSSNILLDEKFEAHLADFGLSRLLRP 926 (1052)
Q Consensus 899 Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 926 (1052)
|+++.||+++ ++.++++|||.|....+
T Consensus 150 DLs~~NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 150 DLSEYNMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred CCCHHHEEEE-CCcEEEEECCCceeCCC
Confidence 9999999997 46899999999976643
No 470
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.14 E-value=3.1e-12 Score=134.01 Aligned_cols=85 Identities=22% Similarity=0.245 Sum_probs=48.2
Q ss_pred CcEEEEEecCCCCccc----CCccccCCcCCCeEecCCC---CCCCCCccc-------ccCCCCccEEeccCCcccCccc
Q 001561 86 GRVTMLILPRKGLKGI----IPRSLGHLNQLKLLDLSCN---HLEGVVPVE-------LSNLKQLEVLDLSHNMLSGPVS 151 (1052)
Q Consensus 86 ~~v~~l~L~~~~l~g~----~~~~l~~l~~L~~L~Ls~n---~i~~~~p~~-------l~~l~~L~~L~Ls~N~l~~~~~ 151 (1052)
..++.|+|++|.+... +.+.+.+.++|+..++|+- +....+|.. +...++|++||||+|.|....+
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~ 109 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGI 109 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccch
Confidence 4577788888777544 4456677777777777752 223334433 3344577777777777765433
Q ss_pred ccc----cccCCccEEEccCccc
Q 001561 152 GML----AGLNLIQSLNVSSNSF 170 (1052)
Q Consensus 152 ~~l----~~l~~L~~L~Ls~N~l 170 (1052)
..| ..+..|++|.|.+|.+
T Consensus 110 ~~l~~ll~s~~~L~eL~L~N~Gl 132 (382)
T KOG1909|consen 110 RGLEELLSSCTDLEELYLNNCGL 132 (382)
T ss_pred HHHHHHHHhccCHHHHhhhcCCC
Confidence 322 2334444455544444
No 471
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.11 E-value=1.7e-11 Score=124.91 Aligned_cols=128 Identities=25% Similarity=0.283 Sum_probs=56.2
Q ss_pred ccceeecccccccCCCCccccCCCccceeecccccccccCchhhccCCcCcEEeccCCcCCCCcccchhhccCcccceEe
Q 001561 350 SLCTLDLATNHFSGPLPNSLSDCHDLKILSLAKNELSGQVPESFGKLTSLLFLSLSNNSFNHLSGTLSVLQQCKNLTTLI 429 (1052)
Q Consensus 350 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~l~~L~~L~ 429 (1052)
.|++||||+|.|+ .+..+..-.+.++.|++++|.|... +.+..+++|+.||||+|.++.+.+. -.++-+.++|.
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~~Gw---h~KLGNIKtL~ 358 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAECVGW---HLKLGNIKTLK 358 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHhhhhh---HhhhcCEeeee
Confidence 3444444444443 2333333334444444444444311 1234444444444444444433321 12233444444
Q ss_pred ccccccCccCCccccCCCcccEEEccCCccccCc-chhhhcCCCCcEEeCcCccCCC
Q 001561 430 LTKNFVGEEIPENVGGFESLMVLALGNCGLKGHI-PVWLLRCKKLQVLDLSWNHFDG 485 (1052)
Q Consensus 430 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~ 485 (1052)
|+.|.+ +.-+.++.+-+|..||+++|+|...- -..++++|.|+.|.|.+|.+.+
T Consensus 359 La~N~i--E~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 359 LAQNKI--ETLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhhhhH--hhhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 444443 11223344445555555555554211 1346666777777777777763
No 472
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.10 E-value=1.6e-11 Score=131.93 Aligned_cols=207 Identities=22% Similarity=0.253 Sum_probs=106.0
Q ss_pred CCCCCCEEEcccccCCCCCC-ccccCCCCCcEEEcccCcCCchh--hhhhcCCCCCcEEEccCCcCCCCCccc-ccCccc
Q 001561 227 HSPSLKQLHVDNNLLGGDLP-DSLYSMSSLQHVSLSVNNFSGQL--SEKISNLTSLRHLIIFGNQFSGKLPNV-LGNLTQ 302 (1052)
Q Consensus 227 ~~~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~ 302 (1052)
++.+|++..|+++.+..... .....|++++.|||++|-+.... -.....+++|+.|+|+.|++.-..... -..+++
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 44567777777776652211 35566777777777777766332 234456777777777777765222111 123455
Q ss_pred cccccccCCcccCC-CCcccccCCCCcEEEecCccccCcCCcccccCCccceeecccccccCCCC--ccccCCCccceee
Q 001561 303 LEFFVAHSNSFSGP-LPLSLSLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPLP--NSLSDCHDLKILS 379 (1052)
Q Consensus 303 L~~L~l~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~ 379 (1052)
|+.|.++.|.++.. +...+..+++|+.|+|..|............+..|+.|||++|++-. .+ ...+.++.|+.|+
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhhh
Confidence 55555555555421 11223345556666666654222222233344556666666665542 22 3345556666666
Q ss_pred ccccccccc-Cchh-----hccCCcCcEEeccCCcCCCCcccchhhccCcccceEecccccc
Q 001561 380 LAKNELSGQ-VPES-----FGKLTSLLFLSLSNNSFNHLSGTLSVLQQCKNLTTLILTKNFV 435 (1052)
Q Consensus 380 L~~N~l~~~-~p~~-----~~~l~~L~~L~L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N~l 435 (1052)
++.+.++.. .|+. ...+++|++|++..|+|..++. +..+..+++|+.|.+..|.+
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~s-l~~l~~l~nlk~l~~~~n~l 338 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRS-LNHLRTLENLKHLRITLNYL 338 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccc-cchhhccchhhhhhcccccc
Confidence 666655432 1221 2344566666666666655432 22333334444444444444
No 473
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=2.6e-11 Score=130.36 Aligned_cols=208 Identities=21% Similarity=0.163 Sum_probs=102.8
Q ss_pred CCCccEEeccCCcccCccc-ccccccCCccEEEccCcccCCcc---cccccCCcccEEEecCCccCCccchhhhhccccc
Q 001561 133 LKQLEVLDLSHNMLSGPVS-GMLAGLNLIQSLNVSSNSFNGSL---FELGEFSNLAVFNISNNSFTGKLNSRIWSASKEI 208 (1052)
Q Consensus 133 l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~---~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~L 208 (1052)
+++|+...|.+..+..... +....+++++.||||.|-|.... .-...+++|+.|+|+.|++.--.....-..+++|
T Consensus 120 ~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~l 199 (505)
T KOG3207|consen 120 LKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHL 199 (505)
T ss_pred HHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhh
Confidence 3444444444443332111 23334444444444444433322 1123444444444444444422222222234455
Q ss_pred ceeeccCccccc--ccccCCCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCCchh-hhhhcCCCCCcEEEcc
Q 001561 209 QILDLSMNHFMG--SLQGLDHSPSLKQLHVDNNLLGGDLPDSLYSMSSLQHVSLSVNNFSGQL-SEKISNLTSLRHLIIF 285 (1052)
Q Consensus 209 ~~L~Ls~n~l~~--~~~~l~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls 285 (1052)
+.|.|+.|.++. +...+..+|+|+.|+|..|....+-.....-+..|++|||++|++-... ....+.++.|+.|+++
T Consensus 200 K~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls 279 (505)
T KOG3207|consen 200 KQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLS 279 (505)
T ss_pred heEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhcc
Confidence 555555555531 1122344566666666666433233333444566667777766654221 1345566667777777
Q ss_pred CCcCCCC-Cccc-----ccCccccccccccCCcccCC-CCcccccCCCCcEEEecCccccCc
Q 001561 286 GNQFSGK-LPNV-----LGNLTQLEFFVAHSNSFSGP-LPLSLSLCSKLHVLDLRNNSLTGP 340 (1052)
Q Consensus 286 ~N~l~~~-~p~~-----~~~l~~L~~L~l~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~ 340 (1052)
.+.++.. .|+. ...+++|++|++..|++... .-..+..+.+|+.|.+..|.++..
T Consensus 280 ~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 280 STGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNKE 341 (505)
T ss_pred ccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccccc
Confidence 7666543 2222 24566777777777777422 113445566777777777877743
No 474
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.07 E-value=1.1e-09 Score=106.17 Aligned_cols=131 Identities=26% Similarity=0.371 Sum_probs=102.6
Q ss_pred CeEcccCceEEEEEEECCCcEEEEEEe-cCCc--hh-----hHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEEEe
Q 001561 777 NIIGCGGFGLVYKATLTNGTKAAVKRL-SGDC--GQ-----MEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIYSY 848 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~~g~~vavK~~-~~~~--~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 848 (1052)
..+++|+-+.+|.+.+. |.++++|.- ++.- +. ....-.+|++++++++--.|...+-+..+++...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35889999999999876 444666643 3221 11 123457799999999877777777777788888999999
Q ss_pred ccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccc
Q 001561 849 MENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRL 923 (1052)
Q Consensus 849 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~ 923 (1052)
++|..|.+.+... ...++..+-+-+.-||.. +|+|+|+.++||++..++ +.++|||++..
T Consensus 81 I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999988888653 255677788889999987 999999999999998875 99999999974
No 475
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.06 E-value=1.2e-10 Score=131.89 Aligned_cols=245 Identities=21% Similarity=0.209 Sum_probs=175.3
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC--CCcEEEEEEecCCchhhHHH--HHHHHHHHHhc-CCCceeeeeceEeeCCeEE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT--NGTKAAVKRLSGDCGQMERE--FQAEVEALSRA-QHKNLVSLQGYCRHGNDRL 843 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 843 (1052)
...+|..+..||.|.|+.|++...+ ++..|++|...........+ -..|+-+...+ .|.++++....+...+..|
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 3567889999999999999998754 67889999876544332222 24566666666 5889999888888888888
Q ss_pred EEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCC-CCeEEeeccccc
Q 001561 844 LIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEK-FEAHLADFGLSR 922 (1052)
Q Consensus 844 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~-~~~kl~DfG~a~ 922 (1052)
+--||+++++...... ....+++..++++..|++.++.++|+ +.++|+|+||+||++..+ +.-++.|||+++
T Consensus 343 ip~e~~~~~s~~l~~~----~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSV----TSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred CchhhhcCcchhhhhH----HHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhcccccccc
Confidence 9999999998776652 34557788889999999999999997 499999999999999886 788999999997
Q ss_pred ccCCCCCeeeeccccccccc--CccccCCcCCCcccchHHHHHHHHHHHcCCCCCcccCCCCchhHHHHHHHhhhccccc
Q 001561 923 LLRPYDTHVTTDLVGTLGYI--PPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVFQMKSEKREV 1000 (1052)
Q Consensus 923 ~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwslGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
.+.-.. ....+.-+++ +|+......+..++|+||||.-+.|.++|..--+. ..+|.... .+...
T Consensus 416 ~~~~~~----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~--------~~~~~~i~--~~~~p 481 (524)
T KOG0601|consen 416 RLAFSS----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES--------GVQSLTIR--SGDTP 481 (524)
T ss_pred ccceec----ccccccccccccchhhccccccccccccccccccccccccCcccCcc--------cccceeee--ccccc
Confidence 532111 1112223444 55566677788899999999999999998764221 01111100 00000
Q ss_pred ccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001561 1001 EIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIEEVVTWL 1044 (1052)
Q Consensus 1001 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1044 (1052)
. . ......+..+...+..+++..||.+.+.....
T Consensus 482 ~--------~--~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 482 N--------L--PGLKLQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred C--------C--CchHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence 0 0 11114677888899999999999998876643
No 476
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.04 E-value=4.2e-11 Score=122.12 Aligned_cols=128 Identities=23% Similarity=0.197 Sum_probs=84.2
Q ss_pred cccceeeccCcccccccccCCCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEEcc
Q 001561 206 KEIQILDLSMNHFMGSLQGLDHSPSLKQLHVDNNLLGGDLPDSLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLIIF 285 (1052)
Q Consensus 206 ~~L~~L~Ls~n~l~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 285 (1052)
+.|+.+|||+|.|+.+..+..-.|.++.|++++|.|... ..+..+++|++||||+|.++ .+..+-.++.+++.|.|+
T Consensus 284 q~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 284 QELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhhccccccchhhhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 457778888888887777777778888888888888743 34788888888888888887 455566677888888888
Q ss_pred CCcCCCCCcccccCccccccccccCCcccCCC-CcccccCCCCcEEEecCcccc
Q 001561 286 GNQFSGKLPNVLGNLTQLEFFVAHSNSFSGPL-PLSLSLCSKLHVLDLRNNSLT 338 (1052)
Q Consensus 286 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~ 338 (1052)
+|.|... ..++.+-+|+.|++.+|+|.... -..+++++-|+.+.|.+|.+.
T Consensus 361 ~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 361 QNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred hhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 8877632 22444555555555555554211 123444444444444444444
No 477
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.04 E-value=3.3e-11 Score=139.88 Aligned_cols=127 Identities=30% Similarity=0.332 Sum_probs=54.7
Q ss_pred CCCCcEEEccCCcCCCCCc-ccccCccccccccccCCcccCCCCcccccCCCCcEEEecCccccCcCCcccccCC--ccc
Q 001561 276 LTSLRHLIIFGNQFSGKLP-NVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSGLS--SLC 352 (1052)
Q Consensus 276 l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~ 352 (1052)
+++|+.+++++|++...-+ . ...+.+++.+++..|.+... ..+..+..+..+++..|.++...+. ..+. .|+
T Consensus 161 l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~~~l--~~~~~~~L~ 235 (414)
T KOG0531|consen 161 LKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKISKLEGL--NELVMLHLR 235 (414)
T ss_pred chhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccceeccCc--ccchhHHHH
Confidence 4444444444444442222 1 24444445555555544421 1223333344445555555432211 1112 255
Q ss_pred eeecccccccCCCCccccCCCccceeecccccccccCchhhccCCcCcEEeccCCcCC
Q 001561 353 TLDLATNHFSGPLPNSLSDCHDLKILSLAKNELSGQVPESFGKLTSLLFLSLSNNSFN 410 (1052)
Q Consensus 353 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 410 (1052)
.+++++|.+. ..+..+..+..+..|++.+|++... ..+...+.+..+.+..|.+.
T Consensus 236 ~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 236 ELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred HHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 5555555555 2223444455555555555555422 12333344444444444443
No 478
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.04 E-value=1.7e-09 Score=114.73 Aligned_cols=142 Identities=20% Similarity=0.265 Sum_probs=110.2
Q ss_pred CeEcccCceEEEEEEECCCcEEEEEEecCCch-hhHHHHHHHHHHHHhcCCC--ceeeeeceEeeC---CeEEEEEEecc
Q 001561 777 NIIGCGGFGLVYKATLTNGTKAAVKRLSGDCG-QMEREFQAEVEALSRAQHK--NLVSLQGYCRHG---NDRLLIYSYME 850 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~---~~~~lv~e~~~ 850 (1052)
+.|+.|.++.||++...+|..+++|....... ....++..|+++++.+++. .+.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 57899999999999887778999998764432 1345688999999999763 456677776653 25689999999
Q ss_pred CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 001561 851 NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVC--------------------------------------- 891 (1052)
Q Consensus 851 ~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------- 891 (1052)
|.++.+.+.. ..++..++..++.++++++++||+..
T Consensus 84 G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 84 GRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 9887765431 24677778888888999998888531
Q ss_pred --------------CCCeEEcCCCCCceEECC--CCCeEEeecccccc
Q 001561 892 --------------EPHIVHRDVKSSNILLDE--KFEAHLADFGLSRL 923 (1052)
Q Consensus 892 --------------~~~i~HrDlkp~Nill~~--~~~~kl~DfG~a~~ 923 (1052)
...++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 66789999998864
No 479
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.03 E-value=1.3e-10 Score=115.23 Aligned_cols=83 Identities=31% Similarity=0.439 Sum_probs=15.7
Q ss_pred CCcCCCeEecCCCCCCCCCccccc-CCCCccEEeccCCcccCcccccccccCCccEEEccCcccCCccccc-ccCCcccE
Q 001561 108 HLNQLKLLDLSCNHLEGVVPVELS-NLKQLEVLDLSHNMLSGPVSGMLAGLNLIQSLNVSSNSFNGSLFEL-GEFSNLAV 185 (1052)
Q Consensus 108 ~l~~L~~L~Ls~n~i~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~l-~~l~~L~~ 185 (1052)
+...+++|+|++|.|+.+ +.++ .+.+|+.||||+|.|+... .+..++.|++|++++|+|+.....+ ..+++|+.
T Consensus 17 n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQE 92 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S--T--T----TT--EEE--SS---S-CHHHHHH-TT--E
T ss_pred cccccccccccccccccc--cchhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCccccchHHhCCcCCE
Confidence 334455666666666532 1233 3555666666666655432 2444555555555555554432222 23444444
Q ss_pred EEecCCccC
Q 001561 186 FNISNNSFT 194 (1052)
Q Consensus 186 L~Ls~n~l~ 194 (1052)
|++++|+|.
T Consensus 93 L~L~~N~I~ 101 (175)
T PF14580_consen 93 LYLSNNKIS 101 (175)
T ss_dssp EE-TTS---
T ss_pred EECcCCcCC
Confidence 444444443
No 480
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.99 E-value=6.9e-11 Score=137.18 Aligned_cols=198 Identities=29% Similarity=0.297 Sum_probs=120.7
Q ss_pred cccccceeeccCcccccccccCCCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCCchhhhhhcCCCCCcEEE
Q 001561 204 ASKEIQILDLSMNHFMGSLQGLDHSPSLKQLHVDNNLLGGDLPDSLYSMSSLQHVSLSVNNFSGQLSEKISNLTSLRHLI 283 (1052)
Q Consensus 204 ~~~~L~~L~Ls~n~l~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 283 (1052)
.+..++.+++..|.+......+..+.+|+.|++.+|+|..+ ...+..+++|++|+|++|.|+... .+..++.|+.|+
T Consensus 70 ~l~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred HhHhHHhhccchhhhhhhhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 34455555666666666555677778888888888888743 333677888888888888887543 455666788888
Q ss_pred ccCCcCCCCCcccccCccccccccccCCcccCCCC-cccccCCCCcEEEecCccccCcCCcccccCCccceeeccccccc
Q 001561 284 IFGNQFSGKLPNVLGNLTQLEFFVAHSNSFSGPLP-LSLSLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFS 362 (1052)
Q Consensus 284 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 362 (1052)
+++|.|+.. ..+..++.|+.+++++|.+...-+ . ...+.+++.+++.+|.+.... .+..+..+..+++..|.++
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~--~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIE--GLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhccc--chHHHHHHHHhhcccccce
Confidence 888888732 234556777777777777764433 2 455666667777777665322 2223344444466666665
Q ss_pred CCCCccccCCC--ccceeecccccccccCchhhccCCcCcEEeccCCcCCCC
Q 001561 363 GPLPNSLSDCH--DLKILSLAKNELSGQVPESFGKLTSLLFLSLSNNSFNHL 412 (1052)
Q Consensus 363 ~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l 412 (1052)
..-+ +..+. .|+.+++++|++. ..+..+..+..+..|++.+|++..+
T Consensus 222 ~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~ 270 (414)
T KOG0531|consen 222 KLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL 270 (414)
T ss_pred eccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc
Confidence 3221 11222 2666666666665 3334455556666666666665543
No 481
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.99 E-value=4.8e-09 Score=101.04 Aligned_cols=143 Identities=18% Similarity=0.270 Sum_probs=106.4
Q ss_pred ccCeEcccCceEEEEEEECCCcEEEEEE-ecCCc-------hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEEEE
Q 001561 775 QANIIGCGGFGLVYKATLTNGTKAAVKR-LSGDC-------GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLLIY 846 (1052)
Q Consensus 775 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~-~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 846 (1052)
...+|-||+-+.|+++.+. |+...||. +.+.- .-..++...|++.+.+++--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4678999999999999986 77766664 33221 112345678999999987666665555666777778999
Q ss_pred EeccC-CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCC---eEEeeccccc
Q 001561 847 SYMEN-GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFE---AHLADFGLSR 922 (1052)
Q Consensus 847 e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~---~kl~DfG~a~ 922 (1052)
||++| .++.+++...... ....+....++..|-+.+.-||.. +|+|+|+..+||++..++. +.++|||++.
T Consensus 90 E~~~g~~~vk~~i~~~~~~--~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMED--ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EeccchhHHHHHHHHHccC--cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchh
Confidence 99987 4778887765422 222333367889999999999986 9999999999999975543 5899999985
Q ss_pred c
Q 001561 923 L 923 (1052)
Q Consensus 923 ~ 923 (1052)
.
T Consensus 165 ~ 165 (229)
T KOG3087|consen 165 V 165 (229)
T ss_pred c
Confidence 3
No 482
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.99 E-value=4.1e-10 Score=111.69 Aligned_cols=124 Identities=27% Similarity=0.360 Sum_probs=51.3
Q ss_pred CcEEEEEecCCCCcccCCcccc-CCcCCCeEecCCCCCCCCCcccccCCCCccEEeccCCcccCcccccccccCCccEEE
Q 001561 86 GRVTMLILPRKGLKGIIPRSLG-HLNQLKLLDLSCNHLEGVVPVELSNLKQLEVLDLSHNMLSGPVSGMLAGLNLIQSLN 164 (1052)
Q Consensus 86 ~~v~~l~L~~~~l~g~~~~~l~-~l~~L~~L~Ls~n~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 164 (1052)
-+.+.|+|++++|+.+ +.++ .+.+|+.||||+|.|+.+. .+..+++|++|++++|.|+...+.....+++|++|+
T Consensus 19 ~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 19 VKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELY 94 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S--T--T----TT--EEE--SS---S-CHHHHHH-TT--EEE
T ss_pred cccccccccccccccc--cchhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCccccchHHhCCcCCEEE
Confidence 3678999999999875 3466 6899999999999999653 488899999999999999986554445789999999
Q ss_pred ccCcccCCcc--cccccCCcccEEEecCCccCCc--cchhhhhcccccceeec
Q 001561 165 VSSNSFNGSL--FELGEFSNLAVFNISNNSFTGK--LNSRIWSASKEIQILDL 213 (1052)
Q Consensus 165 Ls~N~l~~~~--~~l~~l~~L~~L~Ls~n~l~~~--~~~~~~~~~~~L~~L~L 213 (1052)
|++|+|.... ..+..+++|++|++.+|.++.. ....++..+++|+.||-
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 9999998654 4577888999999999988733 12234455555555553
No 483
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.95 E-value=2.4e-10 Score=135.49 Aligned_cols=249 Identities=20% Similarity=0.241 Sum_probs=171.4
Q ss_pred hhcCCcccCeEcccCceEEEEEEEC-CCcEEEEEEecCCc---hhhHHHHHHHHHHHHhcCCCceeeeeceEeeCCeEEE
Q 001561 769 STNNFNQANIIGCGGFGLVYKATLT-NGTKAAVKRLSGDC---GQMEREFQAEVEALSRAQHKNLVSLQGYCRHGNDRLL 844 (1052)
Q Consensus 769 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 844 (1052)
..+.+.+.+.+-.|.++.++-+.-. .|...+.|...... ....+....+-.+.-..++|.++.....+......++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4456777888999999999988643 45555555443221 1111122223233333456777777666666778899
Q ss_pred EEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeeccccccc
Q 001561 845 IYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLL 924 (1052)
Q Consensus 845 v~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~ 924 (1052)
|++|..+++|...++.. ...+.+.++.....+..+.+|||.. .+.|||++|.|.+...+++.+++|||.....
T Consensus 882 ~~~~~~~~~~~Skl~~~----~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNS----GCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hhHHhccCCchhhhhcC----CCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccc
Confidence 99999999998888753 2455566677777889999999985 6899999999999999999999999844322
Q ss_pred CCC---------------------C---C------eeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCC
Q 001561 925 RPY---------------------D---T------HVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRP 974 (1052)
Q Consensus 925 ~~~---------------------~---~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~p 974 (1052)
.-. . . ......+||+.|.+||...+.....++|+|+.|++++|.++|.+|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 110 0 0 012235799999999999999999999999999999999999999
Q ss_pred CcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHcccCCCCCCCCHH
Q 001561 975 VEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQDPRRRPFIE 1038 (1052)
Q Consensus 975 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1038 (1052)
|..... .. +++....... .|.........++.+++...+..+|.+|-.+.
T Consensus 1035 ~na~tp---q~----~f~ni~~~~~-------~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1035 FNAETP---QQ----IFENILNRDI-------PWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCcch---hh----hhhccccCCC-------CCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 964221 11 1211111111 11222333444678888889899999997765
No 484
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.90 E-value=3.5e-08 Score=109.12 Aligned_cols=171 Identities=22% Similarity=0.275 Sum_probs=128.9
Q ss_pred CceEEEEEEE-CCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCceeeeeceEe----eCCeEEEEEEeccCC-Chhh
Q 001561 783 GFGLVYKATL-TNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCR----HGNDRLLIYSYMENG-SLDY 856 (1052)
Q Consensus 783 ~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~lv~e~~~~g-~L~~ 856 (1052)
-..+.||+.. .||..|++|+++++.......-..-+++++++.|+|+|++.+++. .+...++||+|.++. +|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 3457899964 489999999996654433323355688999999999999999886 345688999999864 5655
Q ss_pred hhhccc-----------CCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccC
Q 001561 857 WLHESV-----------DKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 857 ~l~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
.-.... ..+...+++..|.++.|++.||.++|+. |.+.+-+.+++|+++.+.+++|+..|....+.
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeec
Confidence 433211 1234578899999999999999999997 99999999999999999999998888776554
Q ss_pred CCCCeeeecccccccccCccccCCcCCCcccchHHHHHHHHHHHcCCCC
Q 001561 926 PYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRP 974 (1052)
Q Consensus 926 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltG~~p 974 (1052)
.+.. |-+. --.+-|.=.||.+++.|.||..-
T Consensus 445 ~d~~---------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 445 EDPT---------------EPLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCCC---------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 3321 1111 12356999999999999998653
No 485
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.86 E-value=7.5e-08 Score=103.70 Aligned_cols=262 Identities=18% Similarity=0.194 Sum_probs=157.2
Q ss_pred ccCeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhc-CCCceeeeece----E--ee-CCeEEEEE
Q 001561 775 QANIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRA-QHKNLVSLQGY----C--RH-GNDRLLIY 846 (1052)
Q Consensus 775 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~----~--~~-~~~~~lv~ 846 (1052)
..+.||+|+.+.+|-.--- +..|| |++.........+. ++.|... .||-+-.=+.| . .. +....+.|
T Consensus 15 ~gr~LgqGgea~ly~l~e~-~d~VA-KIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV-RDQVA-KIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecchh-hchhh-eeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 4677999999999965211 23344 77765544333322 2333333 46543321111 1 11 22356777
Q ss_pred EeccCCC-hhhhhhc--ccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccc
Q 001561 847 SYMENGS-LDYWLHE--SVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRL 923 (1052)
Q Consensus 847 e~~~~g~-L~~~l~~--~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~ 923 (1052)
+.+.+-. ...+... .+..-....|.-.++++..++.+.+.||.+ |.+-+|+.++|+|+.+++.|.+.|=..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceee
Confidence 7776642 1222211 112334578999999999999999999997 999999999999999999999987543322
Q ss_pred cCCCCCeeeecccccccccCccccC-----CcCCCcccchHHHHHHHHHHHcC-CCCCcccC-----CCCch-hHHHHHH
Q 001561 924 LRPYDTHVTTDLVGTLGYIPPEYSQ-----TLTATCRGDVYSFGVVLLELLTG-RRPVEVCK-----GKNCR-DLVSWVF 991 (1052)
Q Consensus 924 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltG-~~pf~~~~-----~~~~~-~~~~~~~ 991 (1052)
. .........+|...|.+||... +...+...|-|.+||++++++.| +.||.+.. +...+ ++....+
T Consensus 167 ~--~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f 244 (637)
T COG4248 167 N--ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRF 244 (637)
T ss_pred c--cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhccee
Confidence 2 2333445568999999999643 44567789999999999999886 99997532 11111 2222212
Q ss_pred HhhhcccccccccccccchhhHHHHHHHHHHHHHcccC--CCCCCCCHHHHHHHHhhcC
Q 001561 992 QMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCIDQ--DPRRRPFIEEVVTWLDGIG 1048 (1052)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~--dP~~RPs~~evl~~L~~i~ 1048 (1052)
...+.........+..+ + ..--...+..+..+|+.. .|.-||+++..+..|..+.
T Consensus 245 ~ya~~~~~g~~p~P~~~-P-~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~ 301 (637)
T COG4248 245 AYASDQRRGLKPPPRSI-P-LSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALR 301 (637)
T ss_pred eechhccCCCCCCCCCC-C-hhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHH
Confidence 11111111111111111 0 011122456667778754 3678999998888776543
No 486
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.82 E-value=3.4e-09 Score=130.98 Aligned_cols=178 Identities=24% Similarity=0.292 Sum_probs=86.2
Q ss_pred CCcEEEecCcc--ccCcCCcccccCCccceeecccccccCCCCccccCCCccceeecccccccccCchhhccCCcCcEEe
Q 001561 326 KLHVLDLRNNS--LTGPIDLNFSGLSSLCTLDLATNHFSGPLPNSLSDCHDLKILSLAKNELSGQVPESFGKLTSLLFLS 403 (1052)
Q Consensus 326 ~L~~L~L~~N~--l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 403 (1052)
+|++|-+..|. +.......|..++.|+.|||++|.=-+.+|..++++-+|++|+|++..++ .+|..+++++.|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 45555555554 33333333455555555555555444455555555555555555555555 4555555555555555
Q ss_pred ccCCcCCCCcccchhhccCcccceEeccccc--cCccCCccccCCCcccEEEccCCccccCcchhhhcCCCCc----EEe
Q 001561 404 LSNNSFNHLSGTLSVLQQCKNLTTLILTKNF--VGEEIPENVGGFESLMVLALGNCGLKGHIPVWLLRCKKLQ----VLD 477 (1052)
Q Consensus 404 L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N~--l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~ 477 (1052)
+..+.-.... ......+.+|++|.+.... .+...-..+..+..|+.+....... .+-..+..+.+|. .+.
T Consensus 625 l~~~~~l~~~--~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~ 700 (889)
T KOG4658|consen 625 LEVTGRLESI--PGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLS 700 (889)
T ss_pred cccccccccc--cchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhh
Confidence 5554422211 1223335555555554432 1112222334444444444433322 1111122222222 333
Q ss_pred CcCccCCCCCChhhccCCCCCeEeccCCcccc
Q 001561 478 LSWNHFDGNIPPWIGQMENLFYLDFSNNTLTG 509 (1052)
Q Consensus 478 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 509 (1052)
+.++... ..+..++.+.+|+.|.+.++.++.
T Consensus 701 ~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e 731 (889)
T KOG4658|consen 701 IEGCSKR-TLISSLGSLGNLEELSILDCGISE 731 (889)
T ss_pred hcccccc-eeecccccccCcceEEEEcCCCch
Confidence 3333333 445567778888888888888764
No 487
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.77 E-value=5.4e-09 Score=129.27 Aligned_cols=250 Identities=26% Similarity=0.264 Sum_probs=106.3
Q ss_pred CCcEEEcccCc--CCchhhhhhcCCCCCcEEEccCCcCCCCCcccccCccccccccccCCcccCCCCcccccCCCCcEEE
Q 001561 254 SLQHVSLSVNN--FSGQLSEKISNLTSLRHLIIFGNQFSGKLPNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLD 331 (1052)
Q Consensus 254 ~L~~L~L~~N~--l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~ 331 (1052)
+|++|-+..|. +....++.|..++.|+.|||++|.=-+.+|..++++-+|++|++++..++ .+|..+.++.+|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 45555555543 33222333444555555555554443445555555555555555555554 4455555555555555
Q ss_pred ecCccccCcCCcccccCCccceeeccccccc--CCCCccccCCCccceeecccccccccCchhhccCCcCc----EEecc
Q 001561 332 LRNNSLTGPIDLNFSGLSSLCTLDLATNHFS--GPLPNSLSDCHDLKILSLAKNELSGQVPESFGKLTSLL----FLSLS 405 (1052)
Q Consensus 332 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~L~ 405 (1052)
+..+.-...++.....+.+|++|.+..-... ...-..+.++.+|+.+....... .+-..+..+..|. .+.+.
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~ 702 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIE 702 (889)
T ss_pred cccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhc
Confidence 5544433333444444555555554433211 11112223333333333322221 0011111222211 22222
Q ss_pred CCcCCCCcccchhhccCcccceEeccccccCccCCccccC------CCcccEEEccCCccccCcchhhhcCCCCcEEeCc
Q 001561 406 NNSFNHLSGTLSVLQQCKNLTTLILTKNFVGEEIPENVGG------FESLMVLALGNCGLKGHIPVWLLRCKKLQVLDLS 479 (1052)
Q Consensus 406 ~N~l~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 479 (1052)
++.. ......+..+.+|+.|.+.++.+.+........ ++++..+...++..- ..+.+.--.++|+.|++.
T Consensus 703 ~~~~---~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~ 778 (889)
T KOG4658|consen 703 GCSK---RTLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLV 778 (889)
T ss_pred cccc---ceeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEe
Confidence 2111 122233445555555555555553322221111 122222222222211 233444445677777777
Q ss_pred CccCCCCCChhhccCCCCCeEeccCCccccc
Q 001561 480 WNHFDGNIPPWIGQMENLFYLDFSNNTLTGE 510 (1052)
Q Consensus 480 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 510 (1052)
++.....+.+....+..+..+-+..+.+.+.
T Consensus 779 ~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 779 SCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred cccccccCCCHHHHhhhcccEEecccccccc
Confidence 6666555555555555566555666665554
No 488
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.76 E-value=1.1e-07 Score=102.23 Aligned_cols=141 Identities=13% Similarity=0.097 Sum_probs=101.7
Q ss_pred CeEcccCceEEEEEEECCCcEEEEEEecCCch-----------hhHHHHHHHHHHHHhcCCCc--eeeeeceEee-----
Q 001561 777 NIIGCGGFGLVYKATLTNGTKAAVKRLSGDCG-----------QMEREFQAEVEALSRAQHKN--LVSLQGYCRH----- 838 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~----- 838 (1052)
+++-......|+++.+ +|+.|.||+...... .....+.+|++.+.++...+ .++++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4455444455777766 478899997754321 11124788999998885433 3444555543
Q ss_pred CCeEEEEEEeccCC-ChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECC-------C
Q 001561 839 GNDRLLIYSYMENG-SLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDE-------K 910 (1052)
Q Consensus 839 ~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~-------~ 910 (1052)
....++|+|++++. +|.+++.... ....+...+..++.+++..++-||.. ||+|+|++++|||++. +
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCC
Confidence 23568999999986 7888875432 23345677789999999999999997 9999999999999985 4
Q ss_pred CCeEEeecccccc
Q 001561 911 FEAHLADFGLSRL 923 (1052)
Q Consensus 911 ~~~kl~DfG~a~~ 923 (1052)
+.+.++||+.+..
T Consensus 182 ~~~~LIDl~r~~~ 194 (268)
T PRK15123 182 LKLSVIDLHRAQI 194 (268)
T ss_pred ceEEEEECCcccc
Confidence 6899999998864
No 489
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.75 E-value=6.7e-08 Score=97.72 Aligned_cols=126 Identities=21% Similarity=0.243 Sum_probs=82.9
Q ss_pred EEEEEEECCCcEEEEEEecCCc--------------------------hhhHHHHHHHHHHHHhcCCC--ceeeeeceEe
Q 001561 786 LVYKATLTNGTKAAVKRLSGDC--------------------------GQMEREFQAEVEALSRAQHK--NLVSLQGYCR 837 (1052)
Q Consensus 786 ~Vy~~~~~~g~~vavK~~~~~~--------------------------~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 837 (1052)
.||.|...+|..+|+|..+... ........+|++.|.++... ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 3899998889999999875210 01123467899999999766 456665442
Q ss_pred eCCeEEEEEEecc--CCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHH-HhcCCCCeEEcCCCCCceEECCCCCeE
Q 001561 838 HGNDRLLIYSYME--NGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYL-HKVCEPHIVHRDVKSSNILLDEKFEAH 914 (1052)
Q Consensus 838 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~i~HrDlkp~Nill~~~~~~k 914 (1052)
...+||||++ |..+..+.... ++.+....++.+++..+..+ |.. +|+|+|+.+.||+++++ .+.
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 3479999998 54444432211 11334466777888866664 665 99999999999999988 999
Q ss_pred EeecccccccC
Q 001561 915 LADFGLSRLLR 925 (1052)
Q Consensus 915 l~DfG~a~~~~ 925 (1052)
++|||.+....
T Consensus 147 iIDf~qav~~~ 157 (188)
T PF01163_consen 147 IIDFGQAVDSS 157 (188)
T ss_dssp E--GTTEEETT
T ss_pred EEecCcceecC
Confidence 99999997654
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.75 E-value=5.2e-09 Score=85.34 Aligned_cols=61 Identities=43% Similarity=0.612 Sum_probs=46.6
Q ss_pred cccceecccCceeeecCCCCcccccCcCeeeCCCCcCCCCCCccccCccccCeeeeccccc
Q 001561 581 KHLHVLDLSRNNITGTIPSSISEIRNLEVLDLSSNDLHGSIPGSFEKLTFLSKFSVANNHL 641 (1052)
Q Consensus 581 ~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~l~l~~N~l 641 (1052)
++|++|+|++|+|+...+..|..+++|++||+++|+++...|..|..+++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3677788888888865556778888888888888888766667778888888888888765
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.71 E-value=9.2e-09 Score=83.89 Aligned_cols=61 Identities=38% Similarity=0.505 Sum_probs=49.7
Q ss_pred cCCCeEecCCCCCCCCCcccccCCCCccEEeccCCcccCcccccccccCCccEEEccCccc
Q 001561 110 NQLKLLDLSCNHLEGVVPVELSNLKQLEVLDLSHNMLSGPVSGMLAGLNLIQSLNVSSNSF 170 (1052)
Q Consensus 110 ~~L~~L~Ls~n~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l 170 (1052)
++|++|+|++|+|+.+.+..|..+++|++|++++|.|+...++.|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4678888888888877777888888888888888888888888888888888888887764
No 492
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.69 E-value=1.5e-07 Score=97.17 Aligned_cols=149 Identities=23% Similarity=0.172 Sum_probs=105.1
Q ss_pred ccHHHHHHhhcCCcccCeEcccCceEEEEEEECCCcEEEEEEecCCc----------------------hhhHHHHHHHH
Q 001561 761 LTVSDLLKSTNNFNQANIIGCGGFGLVYKATLTNGTKAAVKRLSGDC----------------------GQMEREFQAEV 818 (1052)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~----------------------~~~~~~~~~E~ 818 (1052)
+.+..+.+...-..+...||.|.-+.||.|....|.++|||.=+... .......++|+
T Consensus 81 LAL~~l~~r~~ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf 160 (304)
T COG0478 81 LALHALVKRGIVEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREF 160 (304)
T ss_pred HHHHHHHHcChHHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHH
Confidence 33445554444566788999999999999999999999999543110 01223457899
Q ss_pred HHHHhcCCC--ceeeeeceEeeCCeEEEEEEeccCCChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 001561 819 EALSRAQHK--NLVSLQGYCRHGNDRLLIYSYMENGSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIV 896 (1052)
Q Consensus 819 ~~l~~l~h~--niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~ 896 (1052)
++|.++.-. .|.+.+++ +...+||||++|-.|...- ++.+....++..|++-+...-.. |||
T Consensus 161 ~~L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~~---GiV 224 (304)
T COG0478 161 EALQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYRR---GIV 224 (304)
T ss_pred HHHHHhhhcCCCCCCcccc----ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHHc---Ccc
Confidence 999999755 67777766 4567999999997654321 12233334444444444444343 999
Q ss_pred EcCCCCCceEECCCCCeEEeecccccccC
Q 001561 897 HRDVKSSNILLDEKFEAHLADFGLSRLLR 925 (1052)
Q Consensus 897 HrDlkp~Nill~~~~~~kl~DfG~a~~~~ 925 (1052)
|+|+.+-||++++||.+.++||-.+....
T Consensus 225 HGDlSefNIlV~~dg~~~vIDwPQ~v~~~ 253 (304)
T COG0478 225 HGDLSEFNILVTEDGDIVVIDWPQAVPIS 253 (304)
T ss_pred ccCCchheEEEecCCCEEEEeCcccccCC
Confidence 99999999999999999999999886543
No 493
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.67 E-value=1.9e-08 Score=74.98 Aligned_cols=38 Identities=37% Similarity=0.773 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhcCCC--CCCCCCcCCC--CCCceeeeeeeC
Q 001561 40 PSDLLALKEFAGNLTN--GSIITSWSNE--SMCCQWDGVVCG 77 (1052)
Q Consensus 40 ~~~~~aLl~~k~~~~~--~~~l~sw~~~--~~~c~w~gv~C~ 77 (1052)
++|++||++||+++.. .+.+.+|+.. .+||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 5799999999999974 3789999987 799999999994
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.52 E-value=5.6e-09 Score=118.68 Aligned_cols=127 Identities=27% Similarity=0.238 Sum_probs=86.4
Q ss_pred cccEEEecCCccCCccchhhhhcccccceeeccCcccccccccCCCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcc
Q 001561 182 NLAVFNISNNSFTGKLNSRIWSASKEIQILDLSMNHFMGSLQGLDHSPSLKQLHVDNNLLGGDLPDSLYSMSSLQHVSLS 261 (1052)
Q Consensus 182 ~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~l~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 261 (1052)
.|...+.++|++. ........++.|+.||||+|+++... .+..++.|++|||++|.+....--....+. |+.|.|+
T Consensus 165 ~L~~a~fsyN~L~--~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV--LMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH--hHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 4667777777776 33445666777888888888887665 677778888888888888733222223333 8888888
Q ss_pred cCcCCchhhhhhcCCCCCcEEEccCCcCCCCCc-ccccCccccccccccCCccc
Q 001561 262 VNNFSGQLSEKISNLTSLRHLIIFGNQFSGKLP-NVLGNLTQLEFFVAHSNSFS 314 (1052)
Q Consensus 262 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~ 314 (1052)
+|.++.. ..+.+|.+|+.||+++|-|.+.-. ..++.+..|+.|+|.+|.+-
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 8887633 356778888888888887764322 22456777777888887765
No 495
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.50 E-value=2.8e-08 Score=101.97 Aligned_cols=116 Identities=22% Similarity=0.304 Sum_probs=71.9
Q ss_pred CCccccCCcCCCeEecCCCCCCCCCcc-cc-cCCCCccEEeccCCcccC--cccccccccCCccEEEccCcccCCccccc
Q 001561 102 IPRSLGHLNQLKLLDLSCNHLEGVVPV-EL-SNLKQLEVLDLSHNMLSG--PVSGMLAGLNLIQSLNVSSNSFNGSLFEL 177 (1052)
Q Consensus 102 ~~~~l~~l~~L~~L~Ls~n~i~~~~p~-~l-~~l~~L~~L~Ls~N~l~~--~~~~~l~~l~~L~~L~Ls~N~l~~~~~~l 177 (1052)
.+-.++.+..+..|.|.++.|...... .| ...+.++.|||.+|.|+. .+...+..++.|+.|+|+.|++......+
T Consensus 37 s~~~v~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~l 116 (418)
T KOG2982|consen 37 SYLGVSSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSL 116 (418)
T ss_pred ceeeeccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccC
Confidence 333444445556666666666433221 12 235667778888887774 45556677778888888888777655555
Q ss_pred -ccCCcccEEEecCCccCCccchhhhhcccccceeeccCcc
Q 001561 178 -GEFSNLAVFNISNNSFTGKLNSRIWSASKEIQILDLSMNH 217 (1052)
Q Consensus 178 -~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~Ls~n~ 217 (1052)
-..++|+.|-|.+..+.-.-.......+++++.|.+|.|.
T Consensus 117 p~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~ 157 (418)
T KOG2982|consen 117 PLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNS 157 (418)
T ss_pred cccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccch
Confidence 3566788888877777644444555555666666666553
No 496
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.49 E-value=3.2e-08 Score=113.83 Aligned_cols=150 Identities=21% Similarity=0.302 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCCeEEeecccccccCCCCCe--------eeecccccccccCccccCC
Q 001561 878 QGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFEAHLADFGLSRLLRPYDTH--------VTTDLVGTLGYIPPEYSQT 949 (1052)
Q Consensus 878 ~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~ 949 (1052)
.+++.|+.|+|.. .++||++|.|++|.+++.+..|++.|+++......... ...-..-...|.|||++.+
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3455899999985 89999999999999999999999999998765432111 1111244568999999999
Q ss_pred cCCCcccchHHHHHHHHHHH-cCCCCCcccCCCCchhHHHHHHHhhhcccccccccccccchhhHHHHHHHHHHHHHccc
Q 001561 950 LTATCRGDVYSFGVVLLELL-TGRRPVEVCKGKNCRDLVSWVFQMKSEKREVEIIDASIWHKDREKQLLEMLEIACKCID 1028 (1052)
Q Consensus 950 ~~~~~~~DvwslGvil~ell-tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 1028 (1052)
...+.++|+||+|+.+|.+. .|+.-+............ .. .+......+....+.++.+=+.+++.
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~-----~~--------~~~~~~~~~s~~~p~el~~~l~k~l~ 250 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS-----RN--------LLNAGAFGYSNNLPSELRESLKKLLN 250 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhh-----hc--------ccccccccccccCcHHHHHHHHHHhc
Confidence 88899999999999999999 566555432211111100 00 00001111223344578888999999
Q ss_pred CCCCCCCCHHHHHH
Q 001561 1029 QDPRRRPFIEEVVT 1042 (1052)
Q Consensus 1029 ~dP~~RPs~~evl~ 1042 (1052)
.++.-||++.++..
T Consensus 251 ~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 251 GDSAVRPTLDLLLS 264 (700)
T ss_pred CCcccCcchhhhhc
Confidence 99999998877654
No 497
>PRK09902 hypothetical protein; Provisional
Probab=98.45 E-value=2.2e-06 Score=87.00 Aligned_cols=138 Identities=19% Similarity=0.156 Sum_probs=102.6
Q ss_pred EcccCceEEEEEEECCCcEEEEEEecCCc------hhhHHHHHHHHHHHHhcCCC--ceeeeeceEeeC-----CeEEEE
Q 001561 779 IGCGGFGLVYKATLTNGTKAAVKRLSGDC------GQMEREFQAEVEALSRAQHK--NLVSLQGYCRHG-----NDRLLI 845 (1052)
Q Consensus 779 lG~G~~g~Vy~~~~~~g~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~-----~~~~lv 845 (1052)
-|+||-+.|+..... |..+-+|+-.... +-.+..|.+|+..+.++..- .+.++. ++... -.-+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 467888889998765 5578888764111 33557799999999998532 244554 33211 235799
Q ss_pred EEeccC-CChhhhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCceEECCCCC--eEEeeccccc
Q 001561 846 YSYMEN-GSLDYWLHESVDKDSVLKWDVRLKIAQGAARGLAYLHKVCEPHIVHRDVKSSNILLDEKFE--AHLADFGLSR 922 (1052)
Q Consensus 846 ~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i~HrDlkp~Nill~~~~~--~kl~DfG~a~ 922 (1052)
+|-+++ -+|.+++.+. .-.+.+...+..+..+++++++-||+. ++.|+|+.+.||+++.++. ++++||.-++
T Consensus 104 Te~L~g~~~L~~~l~~~--~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQH--AVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcC--CcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 997764 4888887643 223457778889999999999999997 9999999999999986667 9999998876
Q ss_pred c
Q 001561 923 L 923 (1052)
Q Consensus 923 ~ 923 (1052)
.
T Consensus 179 ~ 179 (216)
T PRK09902 179 R 179 (216)
T ss_pred h
Confidence 5
No 498
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.45 E-value=4.4e-08 Score=100.62 Aligned_cols=181 Identities=24% Similarity=0.248 Sum_probs=99.8
Q ss_pred CCcCcEEeccCCcCCCCcccchhhccCcccceEeccccccCccCCccccCCCcccEEEccCCccc-cCcchhhhcCCCCc
Q 001561 396 LTSLLFLSLSNNSFNHLSGTLSVLQQCKNLTTLILTKNFVGEEIPENVGGFESLMVLALGNCGLK-GHIPVWLLRCKKLQ 474 (1052)
Q Consensus 396 l~~L~~L~L~~N~l~~l~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~ 474 (1052)
.+.++.|||.+|.|+........+.+++.|++|+|+.|.+...+-..-..+.+|+.|-|.+..+. ......+..+|.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 45666777777777766665566667777777777777665444333245566777777666554 12344556677777
Q ss_pred EEeCcCccCCCC-C-Chhhcc-CCCCCeEec---------cCCcccccCCcchhhhhhhcccCCCCCCCCCCCCccceee
Q 001561 475 VLDLSWNHFDGN-I-PPWIGQ-MENLFYLDF---------SNNTLTGEIPKSLTELKSLISSNCTSSNPTASAGIPLYVK 542 (1052)
Q Consensus 475 ~L~Ls~N~l~~~-~-p~~~~~-l~~L~~L~L---------s~N~l~~~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~ 542 (1052)
.|++|.|.+... + ..++.. -+.++.|.+ +-|++....|
T Consensus 150 elHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fp------------------------------ 199 (418)
T KOG2982|consen 150 ELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFP------------------------------ 199 (418)
T ss_pred hhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcc------------------------------
Confidence 777777743210 0 000000 011222222 2222221111
Q ss_pred ccccCCCcCCCCCCCCCCeeeeecCcccccC-CcccccccccceecccCceeeecC-CCCcccccCcCeeeCCCCcCCCC
Q 001561 543 HNRSTNGLPYNQASSFPPSVFLSNNRINGTI-PPEIGQLKHLHVLDLSRNNITGTI-PSSISEIRNLEVLDLSSNDLHGS 620 (1052)
Q Consensus 543 ~~~~~~~l~~~~~~~~~~~l~Ls~N~l~g~i-p~~~~~l~~L~~L~Ls~N~l~g~i-p~~~~~l~~L~~LdLs~N~l~g~ 620 (1052)
-...+++..|.+...- -.....++.+-.|+|+.|+|...- -+.+..+++|..|.+++|.|...
T Consensus 200 ---------------nv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~ 264 (418)
T KOG2982|consen 200 ---------------NVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDP 264 (418)
T ss_pred ---------------cchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccccc
Confidence 1123555566554332 123445666778888888887422 24577788888888888888654
Q ss_pred C
Q 001561 621 I 621 (1052)
Q Consensus 621 ~ 621 (1052)
+
T Consensus 265 l 265 (418)
T KOG2982|consen 265 L 265 (418)
T ss_pred c
Confidence 3
No 499
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.40 E-value=7.8e-09 Score=117.54 Aligned_cols=179 Identities=23% Similarity=0.229 Sum_probs=102.2
Q ss_pred cCCCCCCCCEEEcccccCCCCCCccccCC-CCCcEEEcccCcCC---chhhhhhcCC------CCCcEEEccCCcCCCCC
Q 001561 224 GLDHSPSLKQLHVDNNLLGGDLPDSLYSM-SSLQHVSLSVNNFS---GQLSEKISNL------TSLRHLIIFGNQFSGKL 293 (1052)
Q Consensus 224 ~l~~~~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~---~~~~~~~~~l------~~L~~L~Ls~N~l~~~~ 293 (1052)
.+..+.+|+.|.|.++.|.. ...+..+ .+|++|.-. |.+. ..+....+.. ..|...+.++|.+. ..
T Consensus 104 ~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~-~m 179 (1096)
T KOG1859|consen 104 SIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV-LM 179 (1096)
T ss_pred eeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-hH
Confidence 34555677777777777763 1122221 244444333 2221 1111111111 24666667777766 55
Q ss_pred cccccCccccccccccCCcccCCCCcccccCCCCcEEEecCccccCcCCcccccCCccceeecccccccCCCCccccCCC
Q 001561 294 PNVLGNLTQLEFFVAHSNSFSGPLPLSLSLCSKLHVLDLRNNSLTGPIDLNFSGLSSLCTLDLATNHFSGPLPNSLSDCH 373 (1052)
Q Consensus 294 p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 373 (1052)
..++.-++.|+.|+|++|++.... .+..+++|+.|||+.|.++..+.....++. |+.|.|++|.++.. ..+.+++
T Consensus 180 D~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie~Lk 254 (1096)
T KOG1859|consen 180 DESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL--RGIENLK 254 (1096)
T ss_pred HHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh--hhHHhhh
Confidence 556666677777777777776432 566677777777777777654444444444 77777777776632 3456677
Q ss_pred ccceeecccccccccCc-hhhccCCcCcEEeccCCcCCC
Q 001561 374 DLKILSLAKNELSGQVP-ESFGKLTSLLFLSLSNNSFNH 411 (1052)
Q Consensus 374 ~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~ 411 (1052)
+|+.||++.|-|.+.-. ..++.|..|+.|+|.+|.+-.
T Consensus 255 sL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 255 SLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred hhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 77777777776664321 234556677777777776643
No 500
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.40 E-value=3.4e-06 Score=88.93 Aligned_cols=132 Identities=18% Similarity=0.149 Sum_probs=86.1
Q ss_pred CeEcccCceEEEEEEECCCcEEEEEEecCCchhhHHHHHHHHHHHHhcCCCc--eeeeeceEeeCCeEEEEEEeccCCC-
Q 001561 777 NIIGCGGFGLVYKATLTNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKN--LVSLQGYCRHGNDRLLIYSYMENGS- 853 (1052)
Q Consensus 777 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~- 853 (1052)
..||+|..+.||+. .|..+++|...... ......+|.++++.+..-. +.+++++....+...+|||+++|..
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 56899999999984 25577888876533 2345688999999986433 5677778777778889999999863
Q ss_pred hhhhhhcccCCccccCHHHHHHHHHHHHHH---------------------------------------HHHHHhcC-CC
Q 001561 854 LDYWLHESVDKDSVLKWDVRLKIAQGAARG---------------------------------------LAYLHKVC-EP 893 (1052)
Q Consensus 854 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~---------------------------------------l~~LH~~~-~~ 893 (1052)
+...+.. +......++..+++. .++|.... .+
T Consensus 82 ~~~~~~~--------~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~ 153 (226)
T TIGR02172 82 FSRIISD--------NPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTS 153 (226)
T ss_pred hhhhhcC--------CHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCC
Confidence 2111110 001111111111111 22222211 34
Q ss_pred CeEEcCCCCCceEECCCCCeEEeeccccc
Q 001561 894 HIVHRDVKSSNILLDEKFEAHLADFGLSR 922 (1052)
Q Consensus 894 ~i~HrDlkp~Nill~~~~~~kl~DfG~a~ 922 (1052)
.++|+|+.|.||++++++ +.++||+.+.
T Consensus 154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 154 TCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred ceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 578999999999999988 9999999885
Done!