Query 001562
Match_columns 1052
No_of_seqs 985 out of 7066
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 03:53:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001562.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001562hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1E-107 3E-112 1051.4 68.2 912 46-1051 27-951 (968)
2 PLN00113 leucine-rich repeat r 100.0 3.3E-57 7.1E-62 583.4 34.9 515 123-690 69-589 (968)
3 KOG1187 Serine/threonine prote 100.0 3.3E-47 7.2E-52 424.3 26.9 289 761-1051 61-352 (361)
4 KOG0197 Tyrosine kinases [Sign 100.0 5.6E-46 1.2E-50 406.1 17.8 262 768-1051 199-461 (468)
5 KOG0192 Tyrosine kinase specif 100.0 8.2E-44 1.8E-48 393.3 23.7 256 775-1051 41-303 (362)
6 KOG0581 Mitogen-activated prot 100.0 1.4E-43 3E-48 369.4 19.1 252 776-1046 80-334 (364)
7 KOG1026 Nerve growth factor re 100.0 2.7E-43 5.8E-48 403.2 20.7 259 772-1051 483-762 (774)
8 KOG0595 Serine/threonine-prote 100.0 4.8E-42 1E-46 360.2 22.2 200 774-980 9-217 (429)
9 KOG0615 Serine/threonine prote 100.0 8.6E-43 1.9E-47 364.6 15.0 252 774-1046 171-436 (475)
10 KOG0575 Polo-like serine/threo 100.0 1.4E-41 3.1E-46 374.3 23.3 247 775-1046 18-268 (592)
11 KOG0591 NIMA (never in mitosis 100.0 1.5E-42 3.3E-47 344.6 10.5 254 775-1047 19-281 (375)
12 KOG0196 Tyrosine kinase, EPH ( 100.0 2.5E-42 5.3E-47 385.4 12.7 254 776-1051 630-891 (996)
13 KOG0598 Ribosomal protein S6 k 100.0 1.7E-40 3.7E-45 346.3 18.1 243 773-1039 23-269 (357)
14 KOG0472 Leucine-rich repeat pr 100.0 2.1E-44 4.6E-49 373.6 -11.5 496 115-684 60-563 (565)
15 KOG1095 Protein tyrosine kinas 100.0 4.8E-40 1E-44 390.5 20.7 257 774-1051 691-961 (1025)
16 KOG3653 Transforming growth fa 100.0 4.1E-39 9E-44 342.6 21.5 267 774-1051 209-503 (534)
17 KOG0593 Predicted protein kina 100.0 7.4E-40 1.6E-44 328.8 14.2 262 775-1046 2-283 (396)
18 KOG0198 MEKK and related serin 100.0 3.3E-39 7.1E-44 344.9 18.4 253 775-1047 17-276 (313)
19 KOG0194 Protein tyrosine kinas 100.0 2.4E-39 5.3E-44 360.8 17.2 256 773-1051 155-420 (474)
20 KOG0659 Cdk activating kinase 100.0 9.5E-39 2.1E-43 316.0 19.2 260 775-1047 2-281 (318)
21 KOG0592 3-phosphoinositide-dep 100.0 8.3E-39 1.8E-43 345.9 20.2 251 772-1046 70-337 (604)
22 KOG1094 Discoidin domain recep 100.0 5.5E-39 1.2E-43 347.5 18.6 263 774-1050 537-803 (807)
23 KOG0578 p21-activated serine/t 100.0 3.7E-39 8.1E-44 352.5 16.8 249 775-1046 273-522 (550)
24 KOG0193 Serine/threonine prote 100.0 3.1E-39 6.7E-44 353.3 15.2 263 768-1051 385-653 (678)
25 KOG0661 MAPK related serine/th 100.0 2.3E-39 5.1E-44 344.7 13.8 260 773-1047 8-291 (538)
26 KOG0582 Ste20-like serine/thre 100.0 4.3E-38 9.3E-43 332.5 22.4 261 774-1046 25-292 (516)
27 KOG2052 Activin A type IB rece 100.0 3.2E-38 6.9E-43 333.3 20.3 266 774-1051 210-503 (513)
28 KOG4194 Membrane glycoprotein 100.0 2.8E-40 6E-45 357.2 4.8 378 111-665 72-452 (873)
29 KOG0600 Cdc2-related protein k 100.0 2.3E-38 5.1E-43 339.7 19.1 259 775-1046 117-399 (560)
30 KOG4721 Serine/threonine prote 100.0 3.3E-39 7E-44 347.3 12.1 242 777-1050 126-367 (904)
31 KOG4278 Protein tyrosine kinas 100.0 1.6E-38 3.4E-43 344.4 15.4 263 767-1051 259-523 (1157)
32 KOG0616 cAMP-dependent protein 100.0 1.8E-37 3.8E-42 311.5 19.0 237 775-1039 44-284 (355)
33 KOG0597 Serine-threonine prote 100.0 5E-38 1.1E-42 338.9 16.0 246 775-1046 2-250 (808)
34 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.7E-37 5.8E-42 350.3 22.4 259 773-1051 5-334 (338)
35 KOG0472 Leucine-rich repeat pr 100.0 3.3E-41 7.3E-46 349.8 -10.0 443 114-646 82-545 (565)
36 KOG0583 Serine/threonine prote 100.0 9.2E-37 2E-41 341.1 24.0 249 772-1045 14-273 (370)
37 PHA02988 hypothetical protein; 100.0 1.4E-36 3E-41 334.5 24.7 246 781-1052 26-280 (283)
38 KOG0605 NDR and related serine 100.0 7.5E-37 1.6E-41 331.5 21.4 252 773-1045 139-443 (550)
39 KOG4257 Focal adhesion tyrosin 100.0 2.2E-37 4.8E-42 336.5 17.1 260 769-1051 383-649 (974)
40 KOG4194 Membrane glycoprotein 100.0 9.3E-39 2E-43 345.5 6.1 372 148-689 79-456 (873)
41 KOG0588 Serine/threonine prote 100.0 3.5E-37 7.7E-42 339.7 18.4 247 775-1047 12-263 (786)
42 KOG0201 Serine/threonine prote 100.0 5.4E-38 1.2E-42 332.1 9.8 249 775-1047 13-263 (467)
43 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.5E-36 7.6E-41 328.8 24.1 256 774-1051 4-265 (266)
44 KOG0580 Serine/threonine prote 100.0 4.8E-37 1E-41 299.7 14.0 248 774-1046 21-272 (281)
45 KOG0663 Protein kinase PITSLRE 100.0 2.2E-36 4.8E-41 308.0 18.9 259 775-1046 76-360 (419)
46 PF07714 Pkinase_Tyr: Protein 100.0 2.8E-36 6.2E-41 327.8 20.8 250 778-1048 2-259 (259)
47 cd05096 PTKc_DDR1 Catalytic do 100.0 5.9E-36 1.3E-40 333.9 23.4 263 774-1050 4-304 (304)
48 cd05114 PTKc_Tec_Rlk Catalytic 100.0 8.4E-36 1.8E-40 324.0 23.8 252 775-1049 4-256 (256)
49 cd05072 PTKc_Lyn Catalytic dom 100.0 8.3E-36 1.8E-40 325.1 23.3 256 774-1051 5-261 (261)
50 cd05631 STKc_GRK4 Catalytic do 100.0 1E-35 2.2E-40 328.5 23.8 251 776-1046 1-260 (285)
51 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.7E-36 1.5E-40 325.8 21.8 258 772-1051 3-261 (261)
52 cd05068 PTKc_Frk_like Catalyti 100.0 6.3E-36 1.4E-40 326.0 21.5 257 773-1051 4-261 (261)
53 cd05106 PTKc_CSF-1R Catalytic 100.0 3.9E-36 8.4E-41 343.8 20.0 262 770-1051 33-372 (374)
54 KOG2345 Serine/threonine prote 100.0 7.7E-37 1.7E-41 299.4 11.9 266 770-1051 16-300 (302)
55 KOG0033 Ca2+/calmodulin-depend 100.0 1.7E-37 3.8E-42 302.2 7.4 252 773-1046 9-266 (355)
56 cd05104 PTKc_Kit Catalytic dom 100.0 1E-35 2.2E-40 340.8 23.2 259 773-1051 33-374 (375)
57 cd05052 PTKc_Abl Catalytic dom 100.0 1.5E-35 3.3E-40 323.4 23.5 255 775-1051 6-262 (263)
58 KOG0611 Predicted serine/threo 100.0 1.7E-36 3.6E-41 314.2 14.8 247 774-1047 52-303 (668)
59 PHA03212 serine/threonine kina 100.0 2E-35 4.2E-40 338.9 25.0 261 774-1046 91-375 (391)
60 KOG0589 Serine/threonine prote 100.0 2.1E-36 4.6E-41 330.5 16.0 251 775-1047 4-258 (426)
61 KOG1025 Epidermal growth facto 100.0 1.9E-36 4.2E-41 339.0 14.7 253 776-1051 697-957 (1177)
62 cd05612 STKc_PRKX_like Catalyt 100.0 1.1E-35 2.3E-40 329.4 20.5 244 775-1046 1-253 (291)
63 KOG0585 Ca2+/calmodulin-depend 100.0 4E-36 8.7E-41 319.3 15.3 254 771-1047 93-372 (576)
64 KOG1989 ARK protein kinase fam 100.0 9.2E-36 2E-40 343.7 19.4 259 771-1051 33-311 (738)
65 cd07848 STKc_CDKL5 Catalytic d 100.0 3.1E-35 6.6E-40 325.5 22.9 266 775-1046 1-283 (287)
66 KOG0694 Serine/threonine prote 100.0 8.8E-36 1.9E-40 332.2 18.1 243 773-1041 366-613 (694)
67 cd05048 PTKc_Ror Catalytic Dom 100.0 2.1E-35 4.6E-40 326.0 21.2 256 775-1051 5-283 (283)
68 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.7E-35 1E-39 318.0 23.4 252 775-1049 4-256 (256)
69 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.5E-35 1.2E-39 318.4 23.9 255 774-1051 5-260 (260)
70 cd06649 PKc_MEK2 Catalytic dom 100.0 9.6E-35 2.1E-39 327.7 26.5 199 774-979 4-204 (331)
71 cd05571 STKc_PKB Catalytic dom 100.0 1.9E-35 4.1E-40 332.2 20.7 241 781-1046 1-250 (323)
72 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.9E-35 4.1E-40 334.1 20.7 253 775-1047 1-257 (333)
73 cd05071 PTKc_Src Catalytic dom 100.0 7.9E-35 1.7E-39 317.4 24.4 255 774-1051 5-260 (262)
74 cd05105 PTKc_PDGFR_alpha Catal 100.0 7.9E-35 1.7E-39 333.9 25.5 262 770-1051 32-397 (400)
75 KOG0199 ACK and related non-re 100.0 5.5E-36 1.2E-40 329.9 15.1 252 774-1047 109-368 (1039)
76 cd08228 STKc_Nek6 Catalytic do 100.0 1.1E-34 2.4E-39 317.4 25.5 259 775-1052 2-266 (267)
77 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.4E-35 1.4E-39 317.9 23.4 256 773-1051 4-260 (260)
78 PTZ00263 protein kinase A cata 100.0 2.2E-35 4.7E-40 332.5 20.3 244 775-1046 18-270 (329)
79 cd07871 STKc_PCTAIRE3 Catalyti 100.0 8.4E-35 1.8E-39 321.7 24.5 258 775-1046 5-284 (288)
80 KOG0660 Mitogen-activated prot 100.0 1.4E-35 3.1E-40 308.1 16.8 260 774-1046 21-309 (359)
81 PTZ00267 NIMA-related protein 100.0 1.1E-34 2.5E-39 342.0 26.4 250 776-1046 68-322 (478)
82 cd05069 PTKc_Yes Catalytic dom 100.0 1.6E-34 3.4E-39 314.8 25.2 255 774-1051 5-260 (260)
83 cd07862 STKc_CDK6 Catalytic do 100.0 4.5E-35 9.9E-40 324.6 21.1 258 775-1046 1-286 (290)
84 cd05059 PTKc_Tec_like Catalyti 100.0 1.1E-34 2.3E-39 315.3 23.5 250 776-1048 5-255 (256)
85 KOG0594 Protein kinase PCTAIRE 100.0 7.4E-35 1.6E-39 304.7 21.2 261 775-1047 11-302 (323)
86 cd05033 PTKc_EphR Catalytic do 100.0 1.6E-34 3.4E-39 315.9 24.7 255 775-1051 4-265 (266)
87 PTZ00426 cAMP-dependent protei 100.0 4.2E-35 9.2E-40 330.7 20.7 245 774-1046 29-283 (340)
88 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.7E-34 3.6E-39 322.0 25.0 260 774-1046 4-287 (303)
89 cd05049 PTKc_Trk Catalytic dom 100.0 1.1E-34 2.5E-39 319.7 23.3 255 775-1050 5-280 (280)
90 cd06650 PKc_MEK1 Catalytic dom 100.0 2.2E-34 4.8E-39 324.7 25.9 199 774-979 4-204 (333)
91 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.5E-34 3.3E-39 319.4 24.0 265 775-1052 4-284 (284)
92 cd05595 STKc_PKB_beta Catalyti 100.0 7.5E-35 1.6E-39 327.3 21.9 241 781-1046 1-250 (323)
93 cd05034 PTKc_Src_like Catalyti 100.0 1.7E-34 3.6E-39 314.8 24.0 257 773-1051 4-261 (261)
94 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.5E-35 1.6E-39 321.6 21.0 267 777-1052 6-282 (283)
95 cd05585 STKc_YPK1_like Catalyt 100.0 5.3E-35 1.1E-39 327.1 20.0 239 783-1046 1-246 (312)
96 cd05094 PTKc_TrkC Catalytic do 100.0 2.1E-34 4.5E-39 319.3 24.2 256 775-1051 5-282 (291)
97 cd05054 PTKc_VEGFR Catalytic d 100.0 9.8E-35 2.1E-39 327.8 21.8 259 773-1051 5-333 (337)
98 cd05593 STKc_PKB_gamma Catalyt 100.0 8.5E-35 1.8E-39 327.4 21.3 241 781-1046 1-250 (328)
99 cd05093 PTKc_TrkB Catalytic do 100.0 2.1E-34 4.5E-39 318.8 24.1 256 775-1051 5-279 (288)
100 cd05062 PTKc_IGF-1R Catalytic 100.0 1.9E-34 4.2E-39 317.3 23.6 257 773-1050 4-277 (277)
101 cd05614 STKc_MSK2_N N-terminal 100.0 1.1E-34 2.4E-39 327.8 22.1 251 776-1046 1-266 (332)
102 cd05108 PTKc_EGFR Catalytic do 100.0 2E-34 4.4E-39 323.3 23.3 254 775-1051 7-268 (316)
103 cd05605 STKc_GRK4_like Catalyt 100.0 2.3E-34 5E-39 317.7 23.1 251 776-1046 1-260 (285)
104 cd05090 PTKc_Ror1 Catalytic do 100.0 1.5E-34 3.2E-39 319.2 21.7 256 775-1051 5-283 (283)
105 cd05073 PTKc_Hck Catalytic dom 100.0 1.4E-34 3E-39 315.2 20.8 256 773-1051 4-260 (260)
106 cd05618 STKc_aPKC_iota Catalyt 100.0 1.8E-34 3.9E-39 324.9 22.0 245 781-1041 1-250 (329)
107 cd05596 STKc_ROCK Catalytic do 100.0 1.2E-34 2.5E-39 331.4 20.8 253 773-1046 41-303 (370)
108 cd05601 STKc_CRIK Catalytic do 100.0 6E-35 1.3E-39 329.7 18.1 252 775-1046 1-262 (330)
109 cd05588 STKc_aPKC Catalytic do 100.0 2E-34 4.3E-39 324.7 22.2 250 781-1046 1-261 (329)
110 cd05584 STKc_p70S6K Catalytic 100.0 2E-34 4.3E-39 324.0 22.1 241 781-1046 2-255 (323)
111 cd05055 PTKc_PDGFR Catalytic d 100.0 4.6E-34 1E-38 317.9 24.5 258 774-1051 34-301 (302)
112 PTZ00283 serine/threonine prot 100.0 3.3E-34 7.1E-39 337.9 24.5 254 772-1046 29-296 (496)
113 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.8E-34 6.1E-39 325.8 23.1 260 776-1046 1-289 (338)
114 cd05039 PTKc_Csk_like Catalyti 100.0 7.4E-34 1.6E-38 308.8 25.3 251 774-1051 5-256 (256)
115 cd05589 STKc_PKN Catalytic dom 100.0 2.5E-34 5.5E-39 323.4 22.4 244 777-1046 1-256 (324)
116 cd05573 STKc_ROCK_NDR_like Cat 100.0 9E-35 2E-39 331.5 18.8 251 775-1046 1-284 (350)
117 KOG0658 Glycogen synthase kina 100.0 3.1E-35 6.8E-40 306.1 13.5 257 776-1046 25-305 (364)
118 cd05092 PTKc_TrkA Catalytic do 100.0 4.7E-34 1E-38 314.6 23.8 255 775-1050 5-280 (280)
119 cd05621 STKc_ROCK2 Catalytic d 100.0 1.9E-34 4.2E-39 329.1 21.2 255 772-1047 40-304 (370)
120 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 6.2E-34 1.3E-38 311.5 24.1 258 775-1052 2-266 (267)
121 cd08219 STKc_Nek3 Catalytic do 100.0 5.4E-34 1.2E-38 309.6 23.4 250 776-1047 1-252 (255)
122 cd05107 PTKc_PDGFR_beta Cataly 100.0 6.2E-34 1.3E-38 326.3 25.0 262 770-1051 32-399 (401)
123 cd05082 PTKc_Csk Catalytic dom 100.0 7E-34 1.5E-38 308.9 24.0 249 775-1051 6-256 (256)
124 cd05053 PTKc_FGFR Catalytic do 100.0 3.6E-34 7.7E-39 318.0 22.2 259 772-1051 9-291 (293)
125 KOG0032 Ca2+/calmodulin-depend 100.0 4.6E-34 9.9E-39 318.7 22.8 251 773-1046 33-292 (382)
126 PLN00034 mitogen-activated pro 100.0 3.6E-34 7.7E-39 326.2 22.4 248 775-1047 74-328 (353)
127 cd05061 PTKc_InsR Catalytic do 100.0 6.6E-34 1.4E-38 314.8 23.9 258 772-1050 3-277 (288)
128 cd05043 PTK_Ryk Pseudokinase d 100.0 5.9E-34 1.3E-38 314.0 23.3 258 773-1051 4-276 (280)
129 cd05084 PTKc_Fes Catalytic dom 100.0 3.7E-34 7.9E-39 310.4 21.3 248 781-1050 1-252 (252)
130 cd05085 PTKc_Fer Catalytic dom 100.0 1.1E-33 2.3E-38 306.4 24.8 247 781-1049 1-249 (250)
131 cd05626 STKc_LATS2 Catalytic d 100.0 4.4E-34 9.4E-39 328.7 23.1 251 776-1046 2-304 (381)
132 cd05599 STKc_NDR_like Catalyti 100.0 2.2E-34 4.8E-39 329.8 20.5 251 775-1046 1-295 (364)
133 KOG0599 Phosphorylase kinase g 100.0 8.9E-35 1.9E-39 287.4 14.7 252 773-1046 15-282 (411)
134 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.9E-34 1.3E-38 317.8 23.4 259 772-1051 12-296 (304)
135 cd08229 STKc_Nek7 Catalytic do 100.0 7.1E-34 1.5E-38 311.0 23.4 258 775-1051 2-265 (267)
136 cd05592 STKc_nPKC_theta_delta 100.0 4.2E-34 9.1E-39 320.1 22.0 238 781-1043 1-243 (316)
137 cd05035 PTKc_Axl_like Catalyti 100.0 9.8E-34 2.1E-38 311.0 24.4 254 777-1051 1-272 (273)
138 cd05628 STKc_NDR1 Catalytic do 100.0 6.1E-34 1.3E-38 325.4 23.6 252 775-1046 1-292 (363)
139 cd05091 PTKc_Ror2 Catalytic do 100.0 5.9E-34 1.3E-38 314.5 22.7 255 776-1051 6-283 (283)
140 cd05590 STKc_nPKC_eta Catalyti 100.0 3.3E-34 7.2E-39 321.5 21.0 236 781-1041 1-241 (320)
141 cd05036 PTKc_ALK_LTK Catalytic 100.0 8.1E-34 1.8E-38 312.2 23.6 257 773-1050 4-277 (277)
142 cd05111 PTK_HER3 Pseudokinase 100.0 9.3E-34 2E-38 312.0 24.0 254 775-1051 7-268 (279)
143 cd05594 STKc_PKB_alpha Catalyt 100.0 1.8E-34 3.9E-39 324.8 18.7 241 781-1046 1-251 (325)
144 KOG0667 Dual-specificity tyros 100.0 2.4E-34 5.1E-39 321.5 19.3 196 776-980 187-391 (586)
145 cd05607 STKc_GRK7 Catalytic do 100.0 7.7E-34 1.7E-38 312.2 23.2 247 783-1048 1-251 (277)
146 cd05075 PTKc_Axl Catalytic dom 100.0 1.2E-33 2.6E-38 310.2 24.7 254 777-1051 1-271 (272)
147 cd05112 PTKc_Itk Catalytic dom 100.0 1E-33 2.3E-38 307.6 23.9 252 775-1049 4-256 (256)
148 cd05089 PTKc_Tie1 Catalytic do 100.0 8.7E-34 1.9E-38 315.2 23.8 254 775-1051 2-275 (297)
149 cd05097 PTKc_DDR_like Catalyti 100.0 5.2E-34 1.1E-38 316.8 22.0 263 774-1050 4-295 (295)
150 cd06625 STKc_MEKK3_like Cataly 100.0 1.7E-33 3.6E-38 307.3 25.6 251 775-1047 2-260 (263)
151 KOG4279 Serine/threonine prote 100.0 6.5E-35 1.4E-39 320.3 14.2 245 781-1046 581-831 (1226)
152 cd05045 PTKc_RET Catalytic dom 100.0 4.7E-34 1E-38 316.4 21.4 255 776-1051 1-286 (290)
153 cd05587 STKc_cPKC Catalytic do 100.0 5.7E-34 1.2E-38 320.6 22.4 241 776-1041 1-246 (324)
154 cd08529 STKc_FA2-like Catalyti 100.0 1.4E-33 3.1E-38 306.5 24.7 250 776-1047 1-253 (256)
155 PRK13184 pknD serine/threonine 100.0 1E-33 2.2E-38 340.2 25.6 257 775-1050 2-289 (932)
156 cd05066 PTKc_EphR_A Catalytic 100.0 1.1E-33 2.3E-38 309.5 23.6 255 775-1051 4-266 (267)
157 cd05116 PTKc_Syk Catalytic dom 100.0 1.3E-33 2.8E-38 307.0 24.1 246 782-1051 2-255 (257)
158 KOG0610 Putative serine/threon 100.0 3.8E-34 8.3E-39 300.5 18.7 253 774-1046 76-391 (459)
159 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.1E-33 2.3E-38 316.1 23.7 257 774-1051 17-299 (307)
160 cd05115 PTKc_Zap-70 Catalytic 100.0 1.7E-33 3.6E-38 305.9 24.6 247 782-1051 2-255 (257)
161 KOG4717 Serine/threonine prote 100.0 2.9E-34 6.4E-39 305.7 18.0 248 774-1046 17-269 (864)
162 cd05622 STKc_ROCK1 Catalytic d 100.0 5.8E-34 1.3E-38 325.5 22.0 259 768-1047 36-304 (371)
163 cd06654 STKc_PAK1 Catalytic do 100.0 1.5E-33 3.2E-38 313.1 24.5 250 774-1046 19-269 (296)
164 cd06646 STKc_MAP4K5 Catalytic 100.0 9.8E-34 2.1E-38 309.9 22.8 255 774-1048 8-266 (267)
165 cd05591 STKc_nPKC_epsilon Cata 100.0 4.5E-34 9.8E-39 320.9 20.6 241 781-1046 1-253 (321)
166 PTZ00036 glycogen synthase kin 100.0 9E-34 2E-38 330.5 23.7 257 773-1046 64-350 (440)
167 cd05056 PTKc_FAK Catalytic dom 100.0 1E-33 2.2E-38 310.3 22.8 256 774-1052 5-266 (270)
168 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.5E-33 3.3E-38 308.6 24.1 255 775-1051 5-267 (268)
169 cd05608 STKc_GRK1 Catalytic do 100.0 8.4E-34 1.8E-38 312.4 22.2 245 783-1046 1-256 (280)
170 cd05095 PTKc_DDR2 Catalytic do 100.0 9.9E-34 2.2E-38 314.7 22.6 263 774-1050 4-296 (296)
171 cd05051 PTKc_DDR Catalytic dom 100.0 1.3E-33 2.8E-38 314.0 23.5 263 774-1050 4-296 (296)
172 cd05065 PTKc_EphR_B Catalytic 100.0 1.3E-33 2.8E-38 309.2 23.2 254 776-1051 5-268 (269)
173 cd05619 STKc_nPKC_theta Cataly 100.0 9.5E-34 2.1E-38 317.1 22.4 240 781-1045 1-246 (316)
174 cd07863 STKc_CDK4 Catalytic do 100.0 6.5E-34 1.4E-38 315.0 20.8 261 776-1046 1-284 (288)
175 cd05616 STKc_cPKC_beta Catalyt 100.0 8.7E-34 1.9E-38 318.9 22.0 241 776-1041 1-246 (323)
176 cd05582 STKc_RSK_N N-terminal 100.0 1.8E-34 4E-39 323.8 16.4 238 781-1043 2-245 (318)
177 cd07853 STKc_NLK Catalytic dom 100.0 1.1E-33 2.3E-38 324.7 23.1 264 776-1046 1-287 (372)
178 cd05050 PTKc_Musk Catalytic do 100.0 1.4E-33 2.9E-38 312.4 23.1 256 774-1050 4-288 (288)
179 cd05629 STKc_NDR_like_fungal C 100.0 5.3E-34 1.1E-38 327.9 20.6 252 775-1047 1-305 (377)
180 cd05040 PTKc_Ack_like Catalyti 100.0 2.2E-33 4.9E-38 305.2 24.4 249 781-1050 1-257 (257)
181 cd05570 STKc_PKC Catalytic dom 100.0 8.4E-34 1.8E-38 318.2 21.5 241 781-1046 1-251 (318)
182 cd05597 STKc_DMPK_like Catalyt 100.0 1.2E-33 2.5E-38 318.8 22.7 254 775-1046 1-265 (331)
183 cd05032 PTKc_InsR_like Catalyt 100.0 1.2E-33 2.7E-38 310.9 22.4 256 774-1050 5-277 (277)
184 PHA03211 serine/threonine kina 100.0 2E-33 4.3E-38 325.6 25.0 262 774-1047 168-455 (461)
185 cd05630 STKc_GRK6 Catalytic do 100.0 6.9E-34 1.5E-38 313.8 20.2 250 777-1046 2-260 (285)
186 cd07876 STKc_JNK2 Catalytic do 100.0 1.7E-33 3.6E-38 321.6 23.9 257 773-1046 19-314 (359)
187 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.9E-33 4.1E-38 315.1 23.8 258 773-1051 10-293 (314)
188 cd05598 STKc_LATS Catalytic do 100.0 5.1E-34 1.1E-38 328.1 19.6 250 776-1046 2-300 (376)
189 cd05088 PTKc_Tie2 Catalytic do 100.0 1.3E-33 2.7E-38 314.7 22.1 255 774-1051 6-280 (303)
190 cd05109 PTKc_HER2 Catalytic do 100.0 2.3E-33 4.9E-38 309.1 23.9 255 774-1051 6-268 (279)
191 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.1E-33 4.5E-38 310.2 23.6 262 776-1051 5-283 (284)
192 cd05625 STKc_LATS1 Catalytic d 100.0 7.6E-34 1.6E-38 327.2 20.9 250 776-1046 2-304 (382)
193 cd05060 PTKc_Syk_like Catalyti 100.0 3.1E-33 6.7E-38 304.0 24.5 247 781-1051 1-255 (257)
194 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.4E-33 5.3E-38 305.5 23.6 240 781-1049 1-262 (262)
195 cd05620 STKc_nPKC_delta Cataly 100.0 1.1E-33 2.4E-38 316.7 21.5 240 781-1045 1-246 (316)
196 cd06643 STKc_SLK Catalytic dom 100.0 2.9E-33 6.2E-38 308.8 24.2 250 776-1046 6-261 (282)
197 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.4E-33 3E-38 319.8 22.2 259 773-1051 5-339 (343)
198 cd05575 STKc_SGK Catalytic dom 100.0 6.8E-34 1.5E-38 319.8 19.4 237 781-1042 1-242 (323)
199 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2E-33 4.4E-38 314.2 23.1 261 775-1046 6-285 (309)
200 cd05632 STKc_GRK5 Catalytic do 100.0 3.1E-33 6.8E-38 308.7 24.1 250 777-1046 2-260 (285)
201 cd06637 STKc_TNIK Catalytic do 100.0 2.2E-33 4.7E-38 308.0 22.7 253 772-1046 3-268 (272)
202 cd06619 PKc_MKK5 Catalytic dom 100.0 3.6E-33 7.8E-38 307.3 24.4 251 775-1047 1-253 (279)
203 cd06656 STKc_PAK3 Catalytic do 100.0 2.5E-33 5.4E-38 311.4 23.1 250 774-1046 18-268 (297)
204 cd07874 STKc_JNK3 Catalytic do 100.0 1.9E-33 4.2E-38 320.7 22.8 258 773-1047 15-311 (355)
205 cd06655 STKc_PAK2 Catalytic do 100.0 4.5E-33 9.8E-38 309.0 24.9 249 775-1046 19-268 (296)
206 cd05615 STKc_cPKC_alpha Cataly 100.0 2.2E-33 4.7E-38 315.4 22.6 241 776-1041 1-246 (323)
207 cd08221 STKc_Nek9 Catalytic do 100.0 5.9E-33 1.3E-37 301.6 25.3 250 776-1047 1-253 (256)
208 cd05058 PTKc_Met_Ron Catalytic 100.0 4.5E-33 9.9E-38 303.7 24.4 250 781-1051 1-259 (262)
209 PF00069 Pkinase: Protein kina 100.0 2.3E-33 5.1E-38 305.5 22.1 252 777-1046 1-256 (260)
210 cd06612 STKc_MST1_2 Catalytic 100.0 2.5E-33 5.3E-38 304.6 22.1 250 774-1046 2-252 (256)
211 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.5E-33 5.4E-38 315.5 22.9 243 781-1041 1-248 (327)
212 cd06644 STKc_STK10_LOK Catalyt 100.0 5.8E-33 1.3E-37 308.0 25.5 252 774-1046 11-268 (292)
213 cd05604 STKc_SGK3 Catalytic do 100.0 6.6E-34 1.4E-38 320.2 18.1 240 781-1045 1-245 (325)
214 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 6E-33 1.3E-37 304.0 25.1 252 781-1049 1-268 (269)
215 cd05602 STKc_SGK1 Catalytic do 100.0 1E-33 2.2E-38 318.7 19.4 241 781-1046 1-246 (325)
216 cd08223 STKc_Nek4 Catalytic do 100.0 7.5E-33 1.6E-37 301.0 25.6 249 776-1046 1-253 (257)
217 cd06613 STKc_MAP4K3_like Catal 100.0 9E-33 1.9E-37 301.3 25.9 254 774-1046 2-259 (262)
218 cd05046 PTK_CCK4 Pseudokinase 100.0 4.5E-33 9.7E-38 306.1 23.6 256 775-1050 5-275 (275)
219 cd06615 PKc_MEK Catalytic doma 100.0 7E-33 1.5E-37 309.5 25.5 257 775-1047 1-287 (308)
220 cd06611 STKc_SLK_like Catalyti 100.0 3.2E-33 6.9E-38 308.1 22.3 253 774-1047 4-262 (280)
221 cd00192 PTKc Catalytic domain 100.0 5.8E-33 1.3E-37 302.6 24.1 248 781-1049 1-262 (262)
222 cd07868 STKc_CDK8 Catalytic do 100.0 3.7E-33 8.1E-38 313.4 23.2 196 780-981 6-220 (317)
223 KOG0577 Serine/threonine prote 100.0 1.3E-34 2.9E-39 313.1 10.8 243 777-1046 28-277 (948)
224 cd06645 STKc_MAP4K3 Catalytic 100.0 4.3E-33 9.3E-38 304.8 23.0 252 775-1046 9-264 (267)
225 cd05100 PTKc_FGFR3 Catalytic d 100.0 4E-33 8.7E-38 315.2 23.4 257 774-1051 11-293 (334)
226 cd05047 PTKc_Tie Catalytic dom 100.0 5.7E-33 1.2E-37 304.3 23.9 248 781-1051 1-268 (270)
227 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.4E-33 9.6E-38 307.7 23.2 264 775-1052 4-284 (284)
228 cd06631 STKc_YSK4 Catalytic do 100.0 7.6E-33 1.6E-37 302.5 24.8 250 776-1046 1-261 (265)
229 cd05041 PTKc_Fes_like Catalyti 100.0 3.5E-33 7.7E-38 302.4 21.8 248 781-1050 1-251 (251)
230 KOG0574 STE20-like serine/thre 100.0 1.3E-35 2.8E-40 296.5 2.5 249 776-1047 34-283 (502)
231 KOG0444 Cytoskeletal regulator 100.0 1.7E-36 3.8E-41 329.0 -4.1 366 122-641 6-375 (1255)
232 cd05623 STKc_MRCK_alpha Cataly 100.0 2.9E-33 6.2E-38 315.9 21.7 255 775-1047 1-266 (332)
233 cd07861 STKc_CDK1_euk Catalyti 100.0 3.5E-33 7.7E-38 308.7 22.1 259 776-1046 1-281 (285)
234 smart00219 TyrKc Tyrosine kina 100.0 6.9E-33 1.5E-37 301.4 23.9 251 777-1048 1-258 (258)
235 cd05624 STKc_MRCK_beta Catalyt 100.0 3.5E-33 7.5E-38 314.9 22.1 254 775-1046 1-265 (331)
236 cd07875 STKc_JNK1 Catalytic do 100.0 4.3E-33 9.4E-38 318.8 23.2 257 773-1046 22-317 (364)
237 cd08218 STKc_Nek1 Catalytic do 100.0 6.5E-33 1.4E-37 301.3 23.4 249 776-1046 1-252 (256)
238 cd08227 PK_STRAD_alpha Pseudok 100.0 6.6E-33 1.4E-37 312.5 24.3 198 779-979 2-212 (327)
239 cd05083 PTKc_Chk Catalytic dom 100.0 4.8E-33 1E-37 301.9 22.3 247 775-1050 6-253 (254)
240 cd06624 STKc_ASK Catalytic dom 100.0 7E-33 1.5E-37 303.3 23.4 253 773-1046 6-264 (268)
241 KOG0596 Dual specificity; seri 100.0 9.6E-34 2.1E-38 306.2 16.1 255 771-1046 357-626 (677)
242 PHA03207 serine/threonine kina 100.0 4.9E-33 1.1E-37 320.8 23.0 259 774-1046 91-374 (392)
243 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 8.3E-33 1.8E-37 303.3 23.6 239 782-1049 2-274 (274)
244 cd05603 STKc_SGK2 Catalytic do 100.0 2.3E-33 4.9E-38 315.4 19.6 237 781-1042 1-242 (321)
245 PTZ00284 protein kinase; Provi 100.0 6.7E-33 1.4E-37 327.2 24.0 261 770-1046 124-437 (467)
246 cd05057 PTKc_EGFR_like Catalyt 100.0 9.9E-33 2.1E-37 304.0 23.8 255 774-1051 6-268 (279)
247 cd06640 STKc_MST4 Catalytic do 100.0 1.1E-32 2.4E-37 303.2 23.9 248 775-1047 4-253 (277)
248 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.2E-33 1.1E-37 309.7 21.3 261 775-1046 6-285 (301)
249 PTZ00266 NIMA-related protein 100.0 5.8E-33 1.3E-37 334.7 22.9 257 770-1046 8-294 (1021)
250 cd05627 STKc_NDR2 Catalytic do 100.0 3E-33 6.5E-38 319.5 19.6 251 775-1046 1-292 (360)
251 cd06628 STKc_MAPKKK_Byr2_like 100.0 2E-32 4.3E-37 299.5 25.3 248 776-1046 1-263 (267)
252 cd05042 PTKc_Aatyk Catalytic d 100.0 1.8E-32 3.9E-37 300.2 24.9 251 782-1049 2-268 (269)
253 cd08528 STKc_Nek10 Catalytic d 100.0 2E-32 4.3E-37 299.9 25.0 253 776-1050 1-269 (269)
254 KOG1024 Receptor-like protein 100.0 3E-33 6.6E-38 289.6 17.3 263 768-1051 277-555 (563)
255 cd08220 STKc_Nek8 Catalytic do 100.0 1.5E-32 3.3E-37 298.4 23.8 248 776-1046 1-252 (256)
256 cd06636 STKc_MAP4K4_6 Catalyti 100.0 5.9E-33 1.3E-37 306.3 20.8 259 766-1046 7-278 (282)
257 cd06638 STKc_myosinIIIA Cataly 100.0 9.4E-33 2E-37 305.4 22.3 262 765-1047 8-283 (286)
258 cd06609 STKc_MST3_like Catalyt 100.0 1.6E-32 3.5E-37 301.5 24.0 248 775-1046 1-250 (274)
259 cd07867 STKc_CDC2L6 Catalytic 100.0 1.4E-32 3E-37 309.0 24.0 194 781-980 7-219 (317)
260 cd06632 STKc_MEKK1_plant Catal 100.0 1.9E-32 4.1E-37 298.0 24.2 247 776-1046 1-254 (258)
261 PHA03209 serine/threonine kina 100.0 9.9E-33 2.1E-37 314.3 23.0 193 773-978 64-257 (357)
262 cd05044 PTKc_c-ros Catalytic d 100.0 1.1E-32 2.3E-37 302.0 22.2 249 781-1050 1-269 (269)
263 cd07832 STKc_CCRK Catalytic do 100.0 2.1E-32 4.5E-37 302.7 24.3 259 776-1046 1-281 (286)
264 cd07878 STKc_p38beta_MAPK11 Ca 100.0 8.8E-33 1.9E-37 313.8 21.8 256 772-1046 12-297 (343)
265 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.6E-32 3.4E-37 303.6 23.1 252 775-1046 1-261 (286)
266 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.6E-33 1.2E-37 305.6 19.4 246 776-1046 5-252 (277)
267 cd05110 PTKc_HER4 Catalytic do 100.0 1.4E-32 3.1E-37 306.3 22.8 255 774-1051 6-268 (303)
268 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.2E-32 4.7E-37 302.5 24.1 261 775-1046 1-282 (286)
269 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.3E-32 5E-37 300.1 24.0 255 777-1052 1-273 (273)
270 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 5.4E-33 1.2E-37 302.2 18.9 240 781-1049 1-258 (258)
271 cd07839 STKc_CDK5 Catalytic do 100.0 6.8E-33 1.5E-37 306.2 19.7 258 776-1046 1-280 (284)
272 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2E-32 4.4E-37 298.0 23.1 238 781-1049 1-259 (259)
273 cd06651 STKc_MEKK3 Catalytic d 100.0 3.3E-32 7.2E-37 297.5 24.6 248 776-1046 3-260 (266)
274 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3E-32 6.6E-37 298.1 24.3 255 775-1046 1-263 (267)
275 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.5E-32 7.6E-37 297.6 24.7 251 782-1049 2-267 (268)
276 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.7E-32 3.6E-37 302.9 22.4 257 775-1047 5-266 (284)
277 cd05574 STKc_phototropin_like 100.0 3.3E-32 7.2E-37 305.6 24.9 252 775-1046 1-288 (316)
278 cd06605 PKc_MAPKK Catalytic do 100.0 1.7E-32 3.6E-37 299.8 21.7 253 775-1046 1-256 (265)
279 cd06639 STKc_myosinIIIB Cataly 100.0 4E-32 8.7E-37 301.1 24.0 260 766-1046 13-286 (291)
280 KOG0618 Serine/threonine phosp 100.0 1.8E-35 3.9E-40 337.4 -2.8 464 121-682 43-510 (1081)
281 KOG0579 Ste20-like serine/thre 100.0 8.8E-34 1.9E-38 308.2 10.3 251 775-1046 32-288 (1187)
282 KOG0200 Fibroblast/platelet-de 100.0 1.2E-32 2.7E-37 330.1 21.2 262 769-1050 290-578 (609)
283 cd06652 STKc_MEKK2 Catalytic d 100.0 7E-32 1.5E-36 294.8 25.3 249 775-1046 2-260 (265)
284 cd06626 STKc_MEKK4 Catalytic d 100.0 6.2E-32 1.3E-36 295.1 24.8 251 776-1046 1-260 (264)
285 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 6.8E-32 1.5E-36 298.5 25.1 259 775-1046 1-265 (287)
286 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.9E-32 4E-37 303.1 20.5 259 775-1046 1-282 (286)
287 cd06629 STKc_MAPKKK_Bck1_like 100.0 5.7E-32 1.2E-36 296.8 24.1 253 776-1046 2-268 (272)
288 cd06647 STKc_PAK_I Catalytic d 100.0 3E-32 6.6E-37 302.0 22.1 250 775-1047 19-269 (293)
289 cd06658 STKc_PAK5 Catalytic do 100.0 2E-32 4.3E-37 303.2 20.1 248 777-1047 24-272 (292)
290 cd05586 STKc_Sck1_like Catalyt 100.0 7E-33 1.5E-37 312.7 16.8 240 783-1046 1-252 (330)
291 cd06659 STKc_PAK6 Catalytic do 100.0 3.2E-32 6.9E-37 302.4 21.2 247 777-1046 23-270 (297)
292 cd07833 STKc_CDKL Catalytic do 100.0 5E-32 1.1E-36 300.0 22.7 262 775-1046 1-284 (288)
293 cd06608 STKc_myosinIII_like Ca 100.0 4.1E-32 8.9E-37 298.3 21.9 254 772-1046 3-271 (275)
294 KOG0444 Cytoskeletal regulator 100.0 3.7E-35 8E-40 318.7 -2.3 372 144-669 4-379 (1255)
295 cd06630 STKc_MEKK1 Catalytic d 100.0 7.2E-32 1.6E-36 295.3 23.6 252 776-1046 1-263 (268)
296 cd08225 STKc_Nek5 Catalytic do 100.0 3.7E-32 8.1E-37 295.5 21.2 249 776-1046 1-253 (257)
297 cd05609 STKc_MAST Catalytic do 100.0 8.4E-32 1.8E-36 300.5 24.5 253 776-1049 2-272 (305)
298 cd05580 STKc_PKA Catalytic dom 100.0 6.5E-32 1.4E-36 299.2 23.3 243 775-1045 1-252 (290)
299 cd06623 PKc_MAPKK_plant_like C 100.0 1.1E-31 2.4E-36 293.1 24.8 251 776-1047 2-256 (264)
300 cd07860 STKc_CDK2_3 Catalytic 100.0 4.7E-32 1E-36 299.5 22.0 259 776-1046 1-280 (284)
301 cd08217 STKc_Nek2 Catalytic do 100.0 4.4E-32 9.5E-37 296.3 21.4 249 776-1046 1-261 (265)
302 KOG0986 G protein-coupled rece 100.0 2.4E-33 5.3E-38 296.0 10.6 248 773-1040 183-434 (591)
303 cd06648 STKc_PAK_II Catalytic 100.0 1E-31 2.2E-36 296.6 24.1 247 777-1046 21-268 (285)
304 KOG0584 Serine/threonine prote 100.0 1E-32 2.3E-37 304.8 16.0 245 778-1046 43-295 (632)
305 cd07844 STKc_PCTAIRE_like Cata 100.0 6.8E-32 1.5E-36 299.3 22.7 259 775-1046 5-287 (291)
306 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.5E-31 3.2E-36 296.6 25.4 261 773-1046 3-287 (291)
307 cd06641 STKc_MST3 Catalytic do 100.0 1.7E-31 3.6E-36 293.9 25.1 246 776-1046 5-252 (277)
308 cd07841 STKc_CDK7 Catalytic do 100.0 1.1E-31 2.3E-36 298.8 23.8 258 776-1047 1-282 (298)
309 cd07843 STKc_CDC2L1 Catalytic 100.0 1E-31 2.3E-36 298.1 23.6 258 775-1046 5-289 (293)
310 cd06917 STKc_NAK1_like Catalyt 100.0 7.2E-32 1.6E-36 296.8 22.1 247 776-1046 2-254 (277)
311 cd06614 STKc_PAK Catalytic dom 100.0 1.6E-31 3.4E-36 295.6 24.6 252 773-1046 17-269 (286)
312 cd06607 STKc_TAO Catalytic dom 100.0 1.9E-31 4.1E-36 298.0 25.4 247 774-1047 14-267 (307)
313 KOG0607 MAP kinase-interacting 100.0 1.9E-32 4.2E-37 276.7 14.9 264 767-1046 75-360 (463)
314 cd05122 PKc_STE Catalytic doma 100.0 2.6E-31 5.6E-36 287.8 24.8 249 776-1046 1-250 (253)
315 cd06616 PKc_MKK4 Catalytic dom 100.0 5.6E-32 1.2E-36 299.5 19.9 253 776-1046 5-266 (288)
316 cd07835 STKc_CDK1_like Catalyt 100.0 8.7E-32 1.9E-36 297.2 21.3 258 777-1046 1-279 (283)
317 cd06617 PKc_MKK3_6 Catalytic d 100.0 2E-31 4.4E-36 294.2 23.2 251 775-1046 1-260 (283)
318 cd07840 STKc_CDK9_like Catalyt 100.0 2E-31 4.2E-36 295.0 22.9 257 777-1046 1-283 (287)
319 cd05578 STKc_Yank1 Catalytic d 100.0 6.8E-32 1.5E-36 293.7 18.8 247 776-1045 1-253 (258)
320 PLN00009 cyclin-dependent kina 100.0 2.8E-31 6E-36 294.8 23.9 260 775-1046 2-283 (294)
321 cd07850 STKc_JNK Catalytic dom 100.0 2.8E-31 6.1E-36 302.5 24.2 257 773-1046 14-310 (353)
322 PHA02882 putative serine/threo 100.0 2.4E-31 5.2E-36 294.9 22.8 260 773-1049 10-294 (294)
323 cd08215 STKc_Nek Catalytic dom 100.0 3.2E-31 6.9E-36 288.2 23.3 249 776-1046 1-254 (258)
324 cd07836 STKc_Pho85 Catalytic d 100.0 2.4E-31 5.2E-36 293.9 22.5 258 776-1046 1-280 (284)
325 cd07837 STKc_CdkB_plant Cataly 100.0 3.2E-31 7E-36 294.6 23.7 260 775-1046 1-290 (295)
326 PHA03210 serine/threonine kina 100.0 1.1E-31 2.4E-36 317.6 21.1 262 774-1046 147-453 (501)
327 KOG0666 Cyclin C-dependent kin 100.0 2.8E-32 6.1E-37 274.7 13.4 268 775-1046 24-336 (438)
328 cd07842 STKc_CDK8_like Catalyt 100.0 2.8E-31 6.1E-36 298.2 23.1 267 776-1046 1-312 (316)
329 cd06606 STKc_MAPKKK Catalytic 100.0 6.3E-31 1.4E-35 286.0 24.9 250 776-1046 1-256 (260)
330 cd05577 STKc_GRK Catalytic dom 100.0 3.4E-31 7.5E-36 291.3 22.8 244 783-1046 1-253 (277)
331 cd06635 STKc_TAO1 Catalytic do 100.0 8.4E-31 1.8E-35 294.0 26.3 246 776-1048 26-278 (317)
332 cd08216 PK_STRAD Pseudokinase 100.0 5.1E-31 1.1E-35 295.8 24.2 257 777-1046 4-294 (314)
333 KOG0618 Serine/threonine phosp 100.0 1.2E-34 2.6E-39 330.8 -5.5 455 111-663 56-511 (1081)
334 cd07845 STKc_CDK10 Catalytic d 100.0 4.5E-31 9.8E-36 295.3 23.5 259 774-1046 6-289 (309)
335 cd08226 PK_STRAD_beta Pseudoki 100.0 1.8E-31 3.8E-36 301.0 20.3 259 781-1046 4-307 (328)
336 cd05572 STKc_cGK_PKG Catalytic 100.0 5E-31 1.1E-35 287.6 23.1 242 783-1046 1-251 (262)
337 KOG1035 eIF-2alpha kinase GCN2 100.0 5.9E-32 1.3E-36 317.1 16.4 252 774-1046 478-870 (1351)
338 cd07849 STKc_ERK1_2_like Catal 100.0 2.7E-31 5.8E-36 300.6 21.2 262 774-1047 4-292 (336)
339 cd08530 STKc_CNK2-like Catalyt 100.0 5.4E-31 1.2E-35 286.2 22.6 247 776-1046 1-252 (256)
340 cd05118 STKc_CMGC Catalytic do 100.0 5.3E-31 1.1E-35 290.9 22.6 257 777-1046 1-279 (283)
341 cd06657 STKc_PAK4 Catalytic do 100.0 5.7E-31 1.2E-35 291.4 22.8 244 780-1046 25-269 (292)
342 cd07864 STKc_CDK12 Catalytic d 100.0 5.5E-31 1.2E-35 293.7 22.9 263 772-1046 4-298 (302)
343 cd05583 STKc_MSK_N N-terminal 100.0 4.2E-31 9.1E-36 292.5 21.7 254 776-1049 1-265 (288)
344 cd06627 STKc_Cdc7_like Catalyt 100.0 9.9E-31 2.1E-35 283.7 24.0 247 776-1046 1-250 (254)
345 cd07831 STKc_MOK Catalytic dom 100.0 9.4E-31 2E-35 288.8 24.1 257 777-1046 1-278 (282)
346 cd07838 STKc_CDK4_6_like Catal 100.0 1.2E-30 2.6E-35 288.7 24.9 256 777-1046 1-283 (287)
347 PHA03390 pk1 serine/threonine- 100.0 1.3E-30 2.7E-35 284.9 24.4 245 772-1046 11-261 (267)
348 KOG4645 MAPKKK (MAP kinase kin 100.0 5.5E-33 1.2E-37 327.0 6.1 252 774-1047 1234-1494(1509)
349 cd05633 STKc_GRK3 Catalytic do 100.0 6.4E-31 1.4E-35 289.2 22.2 242 782-1047 1-255 (279)
350 cd05579 STKc_MAST_like Catalyt 100.0 4.2E-31 9.1E-36 288.6 20.1 244 783-1048 1-255 (265)
351 KOG4250 TANK binding protein k 100.0 7.5E-32 1.6E-36 301.5 14.3 265 775-1048 13-307 (732)
352 KOG0983 Mitogen-activated prot 100.0 1.5E-31 3.2E-36 265.0 14.5 250 776-1046 93-348 (391)
353 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.6E-30 3.5E-35 283.8 24.4 249 775-1046 2-260 (264)
354 cd05613 STKc_MSK1_N N-terminal 100.0 1E-30 2.2E-35 289.8 22.9 251 776-1046 1-267 (290)
355 cd05611 STKc_Rim15_like Cataly 100.0 1.1E-30 2.4E-35 284.4 22.4 242 781-1047 2-248 (260)
356 cd06618 PKc_MKK7 Catalytic dom 100.0 1.2E-30 2.7E-35 289.8 23.0 253 774-1047 14-273 (296)
357 cd07865 STKc_CDK9 Catalytic do 100.0 9.8E-31 2.1E-35 293.0 22.2 262 773-1046 10-306 (310)
358 KOG0690 Serine/threonine prote 100.0 7.1E-32 1.5E-36 272.8 11.5 242 773-1039 166-411 (516)
359 cd07858 STKc_TEY_MAPK_plant Ca 100.0 6.7E-31 1.5E-35 297.4 20.8 263 774-1047 4-291 (337)
360 cd07852 STKc_MAPK15 Catalytic 100.0 1.2E-30 2.7E-35 295.5 22.3 260 773-1047 5-295 (337)
361 cd05581 STKc_PDK1 Catalytic do 100.0 7.5E-31 1.6E-35 289.2 19.8 248 775-1046 1-276 (280)
362 cd06633 STKc_TAO3 Catalytic do 100.0 4.1E-30 8.8E-35 287.8 25.9 243 777-1046 23-272 (313)
363 cd06634 STKc_TAO2 Catalytic do 100.0 2.2E-30 4.8E-35 289.3 23.1 245 776-1047 16-267 (308)
364 cd07855 STKc_ERK5 Catalytic do 100.0 8.7E-31 1.9E-35 296.2 20.0 264 774-1046 4-293 (334)
365 cd07834 STKc_MAPK Catalytic do 100.0 1.1E-30 2.5E-35 295.0 20.6 258 776-1047 1-289 (330)
366 cd07877 STKc_p38alpha_MAPK14 C 100.0 3E-30 6.4E-35 292.8 24.0 261 768-1046 10-299 (345)
367 cd07830 STKc_MAK_like Catalyti 100.0 1.4E-30 3E-35 287.6 20.6 264 777-1046 1-279 (283)
368 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.1E-30 2.4E-35 296.0 20.2 258 774-1046 4-299 (342)
369 KOG0604 MAP kinase-activated p 100.0 1.4E-31 3.1E-36 268.7 10.9 252 774-1046 60-321 (400)
370 KOG0612 Rho-associated, coiled 100.0 1E-31 2.2E-36 312.4 11.3 256 769-1045 69-336 (1317)
371 cd07866 STKc_BUR1 Catalytic do 100.0 1.8E-30 3.9E-35 291.0 20.8 260 774-1046 7-307 (311)
372 cd05606 STKc_beta_ARK Catalyti 100.0 3.8E-30 8.3E-35 283.0 23.0 241 782-1046 1-254 (278)
373 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.6E-30 1E-34 288.9 23.7 264 771-1047 6-288 (328)
374 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.3E-30 9.4E-35 291.2 23.4 256 772-1046 12-297 (343)
375 cd08222 STKc_Nek11 Catalytic d 100.0 2.6E-30 5.5E-35 281.6 20.5 248 776-1046 1-256 (260)
376 PTZ00024 cyclin-dependent prot 100.0 4.5E-30 9.8E-35 290.7 22.9 259 775-1046 8-312 (335)
377 cd07829 STKc_CDK_like Catalyti 100.0 3.3E-30 7.1E-35 284.4 21.2 256 777-1046 1-278 (282)
378 cd07879 STKc_p38delta_MAPK13 C 100.0 5.1E-30 1.1E-34 290.7 23.0 254 774-1046 14-296 (342)
379 KOG0586 Serine/threonine prote 100.0 8.9E-31 1.9E-35 289.5 15.5 248 774-1047 55-306 (596)
380 KOG0662 Cyclin-dependent kinas 100.0 2.3E-30 4.9E-35 240.7 14.7 258 776-1046 3-282 (292)
381 cd07851 STKc_p38 Catalytic dom 100.0 4.2E-30 9.1E-35 291.5 19.2 255 773-1046 13-297 (343)
382 KOG4236 Serine/threonine prote 100.0 4.4E-31 9.6E-36 282.2 9.9 244 780-1046 569-818 (888)
383 KOG1006 Mitogen-activated prot 100.0 1.6E-31 3.5E-36 264.0 5.6 252 778-1046 67-326 (361)
384 cd07857 STKc_MPK1 Catalytic do 100.0 1.5E-29 3.3E-34 285.7 22.6 265 776-1046 1-291 (332)
385 KOG0587 Traf2- and Nck-interac 100.0 4.9E-30 1.1E-34 292.1 17.9 259 765-1046 9-281 (953)
386 cd05610 STKc_MASTL Catalytic d 100.0 2.5E-29 5.4E-34 306.7 25.2 145 775-924 4-152 (669)
387 cd05123 STKc_AGC Catalytic dom 100.0 1.8E-29 4E-34 273.1 21.2 236 783-1043 1-240 (250)
388 KOG0696 Serine/threonine prote 100.0 2.1E-30 4.5E-35 269.7 12.3 241 774-1039 348-593 (683)
389 KOG0671 LAMMER dual specificit 100.0 1.3E-30 2.8E-35 271.7 10.1 260 773-1046 87-405 (415)
390 KOG0669 Cyclin T-dependent kin 100.0 3E-31 6.6E-36 259.6 2.4 261 774-1046 16-314 (376)
391 cd05576 STKc_RPK118_like Catal 100.0 3.4E-29 7.3E-34 268.4 18.4 219 786-1041 4-223 (237)
392 KOG1151 Tousled-like protein k 100.0 3.4E-30 7.4E-35 270.1 10.1 257 773-1045 461-739 (775)
393 KOG0603 Ribosomal protein S6 k 100.0 1.9E-29 4E-34 280.6 15.2 239 774-1046 321-562 (612)
394 PLN03225 Serine/threonine-prot 100.0 7.4E-29 1.6E-33 294.5 20.4 261 773-1046 130-449 (566)
395 KOG0984 Mitogen-activated prot 100.0 1.6E-29 3.4E-34 241.1 10.2 209 770-983 41-258 (282)
396 PLN03224 probable serine/threo 100.0 3.5E-28 7.5E-33 280.7 21.9 261 773-1046 143-499 (507)
397 KOG0614 cGMP-dependent protein 100.0 6.6E-30 1.4E-34 272.9 6.5 242 775-1040 420-665 (732)
398 KOG1290 Serine/threonine prote 100.0 5.4E-28 1.2E-32 258.3 20.5 264 775-1046 78-549 (590)
399 smart00220 S_TKc Serine/Threon 100.0 7.4E-28 1.6E-32 258.9 21.5 238 787-1046 1-240 (244)
400 KOG0695 Serine/threonine prote 100.0 2.8E-28 6E-33 247.4 13.4 249 774-1039 249-502 (593)
401 KOG1027 Serine/threonine prote 100.0 7.2E-29 1.6E-33 281.4 10.2 244 777-1046 511-766 (903)
402 KOG0608 Warts/lats-like serine 100.0 9.7E-28 2.1E-32 262.0 15.8 214 776-995 630-888 (1034)
403 KOG0668 Casein kinase II, alph 99.9 2.8E-28 6.2E-33 235.7 9.8 267 764-1046 24-321 (338)
404 KOG0664 Nemo-like MAPK-related 99.9 5.6E-29 1.2E-33 246.1 1.1 260 777-1047 55-343 (449)
405 KOG0665 Jun-N-terminal kinase 99.9 1.7E-27 3.8E-32 242.5 10.1 254 775-1046 17-309 (369)
406 cd00180 PKc Catalytic domain o 99.9 3.1E-25 6.8E-30 232.6 22.1 210 783-1047 1-214 (215)
407 KOG1152 Signal transduction se 99.9 7E-27 1.5E-31 253.9 8.7 197 774-978 560-770 (772)
408 KOG1345 Serine/threonine kinas 99.9 1.8E-26 3.9E-31 228.9 9.8 253 774-1048 23-285 (378)
409 KOG0576 Mitogen-activated prot 99.9 3.6E-27 7.9E-32 260.4 4.8 253 773-1046 13-270 (829)
410 KOG0670 U4/U6-associated splic 99.9 5.2E-26 1.1E-30 243.9 9.8 211 762-980 419-638 (752)
411 smart00221 STYKc Protein kinas 99.9 1.2E-24 2.7E-29 231.0 19.8 198 777-978 1-201 (225)
412 KOG0195 Integrin-linked kinase 99.9 7.5E-26 1.6E-30 224.0 6.2 250 776-1052 191-447 (448)
413 KOG4237 Extracellular matrix p 99.9 1.6E-26 3.4E-31 241.1 -5.2 294 82-414 50-359 (498)
414 KOG1167 Serine/threonine prote 99.9 4E-24 8.7E-29 226.8 10.9 267 770-1046 31-380 (418)
415 PLN03210 Resistant to P. syrin 99.9 1.7E-22 3.7E-27 260.7 26.7 178 117-303 552-736 (1153)
416 PLN03210 Resistant to P. syrin 99.9 2.4E-22 5.2E-27 259.3 27.0 127 531-663 777-904 (1153)
417 KOG4237 Extracellular matrix p 99.9 8.1E-26 1.8E-30 235.8 -4.4 141 138-281 60-201 (498)
418 PLN00181 protein SPA1-RELATED; 99.9 1.3E-23 2.7E-28 263.6 8.9 195 827-1046 28-264 (793)
419 smart00750 KIND kinase non-cat 99.9 2.1E-22 4.4E-27 205.2 15.0 166 856-1050 1-168 (176)
420 PRK15387 E3 ubiquitin-protein 99.9 2.9E-22 6.3E-27 239.0 18.4 121 533-670 343-463 (788)
421 PRK15387 E3 ubiquitin-protein 99.9 3E-22 6.5E-27 238.9 18.6 82 534-624 384-465 (788)
422 PRK15370 E3 ubiquitin-protein 99.9 1.2E-21 2.7E-26 235.6 19.2 191 44-257 59-275 (754)
423 KOG1164 Casein kinase (serine/ 99.9 5.4E-21 1.2E-25 213.7 21.1 257 776-1050 19-296 (322)
424 KOG1163 Casein kinase (serine/ 99.9 3.7E-21 8E-26 188.2 15.0 259 773-1049 13-282 (341)
425 PRK09188 serine/threonine prot 99.9 2.8E-21 6.1E-26 214.1 15.4 168 769-952 12-195 (365)
426 KOG1165 Casein kinase (serine/ 99.8 2.7E-20 5.9E-25 190.5 18.0 259 773-1049 26-297 (449)
427 KOG0590 Checkpoint kinase and 99.8 8.9E-21 1.9E-25 224.3 7.2 252 779-1046 322-584 (601)
428 PRK15370 E3 ubiquitin-protein 99.8 9.7E-20 2.1E-24 219.3 16.0 54 222-281 180-233 (754)
429 COG0515 SPS1 Serine/threonine 99.8 1.7E-18 3.6E-23 195.9 25.1 259 777-1046 2-274 (384)
430 KOG1240 Protein kinase contain 99.8 2.5E-20 5.3E-25 217.4 5.8 249 776-1051 24-295 (1431)
431 PRK10359 lipopolysaccharide co 99.8 3.1E-19 6.8E-24 183.3 9.5 171 773-971 29-216 (232)
432 KOG1023 Natriuretic peptide re 99.8 9.3E-19 2E-23 196.8 12.6 215 825-1051 1-224 (484)
433 PF14531 Kinase-like: Kinase-l 99.8 5.2E-18 1.1E-22 179.6 16.9 231 777-1038 14-288 (288)
434 cd05147 RIO1_euk RIO kinase fa 99.8 1.2E-18 2.5E-23 178.0 11.4 139 780-926 2-167 (190)
435 PRK12274 serine/threonine prot 99.8 1.2E-17 2.7E-22 167.3 15.7 188 778-982 5-212 (218)
436 KOG0617 Ras suppressor protein 99.8 2.5E-20 5.4E-25 172.9 -3.8 168 119-292 29-196 (264)
437 cd05145 RIO1_like RIO kinase f 99.8 1.1E-17 2.4E-22 171.8 14.7 139 780-927 2-168 (190)
438 KOG4158 BRPK/PTEN-induced prot 99.7 5.5E-18 1.2E-22 177.4 10.1 193 829-1045 274-508 (598)
439 KOG0617 Ras suppressor protein 99.7 5.1E-20 1.1E-24 170.9 -4.4 153 529-685 53-212 (264)
440 KOG1166 Mitotic checkpoint ser 99.7 2.7E-17 5.9E-22 197.4 13.7 197 770-974 693-900 (974)
441 KOG0603 Ribosomal protein S6 k 99.7 2.3E-18 5.1E-23 192.6 3.7 225 782-1041 1-232 (612)
442 cd00116 LRR_RI Leucine-rich re 99.7 1.1E-18 2.3E-23 196.3 0.0 88 554-641 191-291 (319)
443 PRK10345 hypothetical protein; 99.7 1.7E-16 3.6E-21 163.3 14.4 136 779-924 6-158 (210)
444 cd00116 LRR_RI Leucine-rich re 99.7 8.4E-19 1.8E-23 197.2 -3.0 264 115-412 15-318 (319)
445 smart00090 RIO RIO-like kinase 99.6 6.9E-16 1.5E-20 163.1 11.8 141 776-926 29-198 (237)
446 PRK14879 serine/threonine prot 99.6 3.1E-15 6.6E-20 157.2 13.7 134 781-925 2-143 (211)
447 KOG1033 eIF-2alpha kinase PEK/ 99.6 2.9E-16 6.2E-21 172.7 4.5 244 775-1044 244-509 (516)
448 cd05144 RIO2_C RIO kinase fami 99.6 4.3E-15 9.3E-20 154.0 12.8 141 772-927 12-176 (198)
449 PRK09605 bifunctional UGMP fam 99.6 6.4E-15 1.4E-19 176.1 15.6 137 774-925 332-476 (535)
450 TIGR03724 arch_bud32 Kae1-asso 99.6 5.8E-15 1.3E-19 153.4 12.9 131 782-926 1-139 (199)
451 PLN03150 hypothetical protein; 99.6 6.7E-15 1.4E-19 177.5 12.6 148 45-205 369-525 (623)
452 KOG0606 Microtubule-associated 99.6 3.2E-15 6.9E-20 175.4 7.9 208 775-1040 83-305 (1205)
453 PLN03150 hypothetical protein; 99.5 5.4E-14 1.2E-18 169.7 12.6 113 558-689 420-532 (623)
454 cd05119 RIO RIO kinase family, 99.5 1.8E-13 3.8E-18 140.7 11.5 136 780-927 2-165 (187)
455 cd05120 APH_ChoK_like Aminogly 99.5 2.3E-13 4.9E-18 134.6 12.0 135 779-925 2-138 (155)
456 PRK01723 3-deoxy-D-manno-octul 99.5 5.4E-13 1.2E-17 141.4 13.9 134 781-925 37-191 (239)
457 KOG0590 Checkpoint kinase and 99.4 2.2E-14 4.8E-19 170.2 -0.4 255 774-1045 19-284 (601)
458 KOG0532 Leucine-rich repeat (L 99.3 4.3E-14 9.2E-19 155.2 -3.8 181 145-398 73-253 (722)
459 TIGR01982 UbiB 2-polyprenylphe 99.3 5.1E-11 1.1E-15 137.5 20.5 141 780-927 122-308 (437)
460 KOG1243 Protein kinase [Genera 99.3 9.7E-11 2.1E-15 133.1 18.0 167 795-973 33-199 (690)
461 KOG0532 Leucine-rich repeat (L 99.3 1.4E-13 3E-18 151.2 -5.3 123 534-662 145-270 (722)
462 KOG1266 Protein kinase [Signal 99.3 7.3E-12 1.6E-16 129.2 7.3 201 823-1046 119-330 (458)
463 KOG0601 Cyclin-dependent kinas 99.2 7.2E-12 1.5E-16 141.4 6.7 247 776-1046 115-378 (524)
464 COG4886 Leucine-rich repeat (L 99.2 1.4E-11 3E-16 142.7 8.2 200 151-398 97-297 (394)
465 COG4886 Leucine-rich repeat (L 99.2 1.2E-11 2.6E-16 143.2 6.5 178 118-304 111-289 (394)
466 PRK04750 ubiB putative ubiquin 99.2 6.7E-10 1.5E-14 129.4 19.8 142 775-927 120-315 (537)
467 PF14580 LRR_9: Leucine-rich r 99.1 2.9E-11 6.3E-16 119.5 4.5 105 532-641 19-126 (175)
468 KOG1259 Nischarin, modulator o 99.1 1.9E-11 4.2E-16 124.1 2.4 133 531-669 283-416 (490)
469 cd05151 ChoK Choline Kinase (C 99.1 2.3E-10 5.1E-15 115.5 9.5 129 781-924 4-135 (170)
470 cd05146 RIO3_euk RIO kinase fa 99.1 1.5E-09 3.3E-14 109.5 12.7 137 780-927 2-175 (197)
471 PF14580 LRR_9: Leucine-rich r 99.1 1.2E-10 2.6E-15 115.2 4.4 110 552-666 15-127 (175)
472 KOG3087 Serine/threonine prote 99.0 3.4E-09 7.3E-14 101.6 13.4 144 779-926 11-166 (229)
473 COG3642 Mn2+-dependent serine/ 99.0 2.4E-09 5.1E-14 103.6 12.0 131 781-925 2-140 (204)
474 KOG1259 Nischarin, modulator o 99.0 4E-11 8.7E-16 121.8 -0.8 141 111-282 272-413 (490)
475 KOG1909 Ran GTPase-activating 99.0 1.8E-11 3.9E-16 127.9 -3.6 250 117-390 24-310 (382)
476 KOG3207 Beta-tubulin folding c 99.0 5.8E-11 1.3E-15 127.4 -0.1 217 143-393 117-341 (505)
477 PF08263 LRRNT_2: Leucine rich 99.0 5.6E-10 1.2E-14 82.8 4.0 40 47-86 2-43 (43)
478 KOG1909 Ran GTPase-activating 98.9 8.1E-11 1.8E-15 123.1 -1.4 112 529-640 182-310 (382)
479 KOG3207 Beta-tubulin folding c 98.9 1.7E-10 3.6E-15 123.9 0.7 62 352-414 119-185 (505)
480 cd05154 ACAD10_11_like Acyl-Co 98.9 7.6E-09 1.6E-13 109.5 11.3 142 781-925 4-206 (223)
481 KOG0531 Protein phosphatase 1, 98.9 2.6E-10 5.6E-15 132.2 -0.9 244 121-417 70-321 (414)
482 KOG0601 Cyclin-dependent kinas 98.9 1.6E-09 3.5E-14 122.6 5.3 245 773-1048 263-515 (524)
483 KOG0531 Protein phosphatase 1, 98.8 5.1E-10 1.1E-14 129.7 -1.7 219 169-414 70-290 (414)
484 KOG3741 Poly(A) ribonuclease s 98.8 1.3E-07 2.9E-12 104.4 16.3 168 787-975 288-474 (655)
485 PF13855 LRR_8: Leucine rich r 98.8 3.4E-09 7.3E-14 86.2 3.1 59 557-615 2-60 (61)
486 KOG0606 Microtubule-associated 98.8 2.5E-09 5.5E-14 126.7 3.0 250 772-1042 801-1084(1205)
487 PRK15123 lipopolysaccharide co 98.8 1.2E-07 2.5E-12 101.7 15.1 140 781-924 28-193 (268)
488 PF13855 LRR_8: Leucine rich r 98.7 5.5E-09 1.2E-13 84.9 3.0 60 605-664 2-61 (61)
489 PF01163 RIO1: RIO1 family; I 98.7 8.5E-08 1.8E-12 96.7 11.9 125 790-926 1-156 (188)
490 COG4248 Uncharacterized protei 98.7 6E-07 1.3E-11 96.6 17.0 261 777-1051 13-300 (637)
491 KOG4658 Apoptotic ATPase [Sign 98.7 7.5E-09 1.6E-13 127.7 3.1 126 124-251 546-675 (889)
492 COG0478 RIO-like serine/threon 98.7 1.4E-07 3E-12 97.1 10.9 136 777-926 93-252 (304)
493 KOG4658 Apoptotic ATPase [Sign 98.6 2.7E-08 5.7E-13 122.9 5.1 88 118-206 566-653 (889)
494 KOG4579 Leucine-rich repeat (L 98.5 1.9E-08 4.1E-13 91.3 0.8 131 534-669 29-163 (177)
495 KOG4579 Leucine-rich repeat (L 98.5 6.7E-09 1.5E-13 94.2 -2.3 104 558-665 29-136 (177)
496 PRK09902 hypothetical protein; 98.4 1.9E-06 4.2E-11 87.1 12.4 137 784-925 27-179 (216)
497 KOG2137 Protein kinase [Signal 98.4 1.1E-07 2.4E-12 109.2 1.2 150 880-1046 106-264 (700)
498 COG1718 RIO1 Serine/threonine 98.3 3E-06 6.5E-11 86.6 11.1 152 766-927 36-217 (268)
499 COG0661 AarF Predicted unusual 98.3 1.1E-05 2.4E-10 93.7 17.3 140 781-927 131-316 (517)
500 PF06293 Kdo: Lipopolysacchari 98.3 3.9E-06 8.6E-11 87.1 12.4 106 816-926 56-171 (206)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.3e-107 Score=1051.39 Aligned_cols=912 Identities=31% Similarity=0.514 Sum_probs=751.4
Q ss_pred ChhhHHHHHHHHHhccCCCCCcccCcCCCCCCCCCCceEeecCCCceEEEEEcccCCCCCCCCcccccccchhhhCCCCC
Q 001562 46 PTTDSASLLSFKASISRDPSNLLATWNSSTDHCTWHGVTCDHFTGRVTALRITGKATPWPSKSSVISGTLSASIAKLTEL 125 (1052)
Q Consensus 46 ~~~d~~all~~k~~~~~~p~~~l~~W~~~~~~C~w~gV~C~~~~~~v~~l~l~~~~~~~~~~~~~l~g~l~~~l~~l~~L 125 (1052)
+++|+.||++||+++. ||.+.+++|+.+.|||.|.||+|++ .++|+.+++.+.. ++|.+++++..+++|
T Consensus 27 ~~~~~~~l~~~~~~~~-~~~~~~~~w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~---------i~~~~~~~~~~l~~L 95 (968)
T PLN00113 27 HAEELELLLSFKSSIN-DPLKYLSNWNSSADVCLWQGITCNN-SSRVVSIDLSGKN---------ISGKISSAIFRLPYI 95 (968)
T ss_pred CHHHHHHHHHHHHhCC-CCcccCCCCCCCCCCCcCcceecCC-CCcEEEEEecCCC---------ccccCChHHhCCCCC
Confidence 5689999999999995 7888889998888999999999986 5799999998754 888899999999999
Q ss_pred CeeEecCCCceecCCCCcc-CCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCccccCCCCCcEEEccC
Q 001562 126 RTLSVPHNSFSGEIPAGVG-ELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGNGELSVIDMSS 204 (1052)
Q Consensus 126 ~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 204 (1052)
+.|+|++|+++|.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++
T Consensus 96 ~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~ 173 (968)
T PLN00113 96 QTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGG 173 (968)
T ss_pred CEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECcc
Confidence 9999999999999998765 999999999999999998886 5689999999999999999999999999999999999
Q ss_pred CcccCccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEEEccCCCCCCCC
Q 001562 205 NRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVLDVSRNSLTDRI 284 (1052)
Q Consensus 205 N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 284 (1052)
|.+.+.+| ..+.++++|++|+|++|.+++.+|..++++++|++|++++|++++.+|..++.+++|++|++++|++++.+
T Consensus 174 n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 252 (968)
T PLN00113 174 NVLVGKIP-NSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPI 252 (968)
T ss_pred CcccccCC-hhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceecccc
Confidence 99988665 46788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCCeeecccCcccccCCCCCCccccccCCCchhhhcccCCcEeecCCCCCcccCCccccCCCCccEEeCCCC
Q 001562 285 PVELADCSKLSVLVLTNIDASLDLDNSRGEFSAFDGGVPYELLLSRSLEVLWAPRANLGGRLPDNWSESCSLKVLNLGQN 364 (1052)
Q Consensus 285 p~~l~~l~~L~~L~L~~n~~~~~l~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~Ls~N 364 (1052)
|..++++++|+.|++++|.+ .+.+|..+..+++|+.|++++|.+.+.+|..+.++++|+.|++++|
T Consensus 253 p~~l~~l~~L~~L~L~~n~l--------------~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n 318 (968)
T PLN00113 253 PSSLGNLKNLQYLFLYQNKL--------------SGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSN 318 (968)
T ss_pred ChhHhCCCCCCEEECcCCee--------------eccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCC
Confidence 99999999999999998654 4567888899999999999999999999999999999999999999
Q ss_pred cccccCCccccccCCCCEEeCCCCcCccCCCCCCC-CCccceEecccCccccCCCCCccccccccCCccccccccccccC
Q 001562 365 SLKGAVPKSLGMCRNLTYLDLSLNNLEGYLPMQLP-VPCMVYFNVSQNNITGVLPRFENVSCDNHFGFQDLQYANVPVMG 443 (1052)
Q Consensus 365 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~ 443 (1052)
.+++.+|..++.+++|+.|+|++|++++.+|..+. +++|+.|++++|++++.+|..
T Consensus 319 ~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~----------------------- 375 (968)
T PLN00113 319 NFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEG----------------------- 375 (968)
T ss_pred ccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChh-----------------------
Confidence 99999999999999999999999999999887664 789999999999999887752
Q ss_pred cccccceeeeeeccCCccccccCcccccccccccccchhHHhhccCCcccCCCCCccccccCCCcceEEecCcccccccc
Q 001562 444 SISDENFVIIHDFSGNKFLGSLPLFAIGDGFLAAKYKPHYRLLLNNNMFNGSVPGERISKCNDLQSFSVNLSANLLSGMS 523 (1052)
Q Consensus 444 ~~~~~~~l~~l~ls~n~~~g~~p~~~~~~~~~~~~~~~~~~l~l~~n~~~~~~p~~~~~~~~~l~~~~l~l~~n~l~~~~ 523 (1052)
+.....+..+++++|++.+.+|... .....+..+.+.+|.+++.+|.. +..++.|+ .+++++|.+.+..
T Consensus 376 -~~~~~~L~~L~l~~n~l~~~~p~~~-------~~~~~L~~L~L~~n~l~~~~p~~-~~~l~~L~--~L~Ls~N~l~~~~ 444 (968)
T PLN00113 376 -LCSSGNLFKLILFSNSLEGEIPKSL-------GACRSLRRVRLQDNSFSGELPSE-FTKLPLVY--FLDISNNNLQGRI 444 (968)
T ss_pred -HhCcCCCCEEECcCCEecccCCHHH-------hCCCCCCEEECcCCEeeeECChh-HhcCCCCC--EEECcCCcccCcc
Confidence 1122346678999999998888432 13445677889999999888764 56666666 5788999998876
Q ss_pred hHHHHhcCCCceEEEccCcccccccccccCCCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCCccCCcCchhhcCC
Q 001562 524 YEAFLLDCVQLVEFEAANNQISGSIAAGVGKLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGNNLTGEIPSQFGHL 603 (1052)
Q Consensus 524 ~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 603 (1052)
...+ ..+++|++|++++|++.+.+|..+. .++|+.|+|++|++++..|..|.++++|+.|+|++|++++.+|..+.++
T Consensus 445 ~~~~-~~l~~L~~L~L~~n~~~~~~p~~~~-~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 522 (968)
T PLN00113 445 NSRK-WDMPSLQMLSLARNKFFGGLPDSFG-SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSC 522 (968)
T ss_pred Chhh-ccCCCCcEEECcCceeeeecCcccc-cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCc
Confidence 5444 5789999999999999999988764 5899999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEcCCCCCCCCCcchhcccccccceeccCCcCCCCCCcccccccccCeEecccCcCCCCCCccc---cccccccc
Q 001562 604 ISLVVLDLSHNALTGSIPASLTKATKLESLFLAHNRLSGEIPVSFSTLVNLSALDLSFNNLSGHIPHLQ---HLDCIAFK 680 (1052)
Q Consensus 604 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~---~l~~~~~~ 680 (1052)
++|++|+|++|++++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|++++|+++|.+|... .+....+.
T Consensus 523 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~ 602 (968)
T PLN00113 523 KKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVA 602 (968)
T ss_pred cCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999654 45667889
Q ss_pred CCccccCCCCCCCCCCCCCCccccccccCCCCccEEEeeeehhhHHHHHHHHHHHhhheeeccccccccc---ccceeee
Q 001562 681 GNKYLASCPDTNATAPEKPPVQLDEKLQNGKRSKVFIIAVVTSASAVLLIFLVIIFVILRRRKFGRIASL---RGQVMVT 757 (1052)
Q Consensus 681 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liv~~~~~~~~~rrrk~~r~~~~---~~~~~~~ 757 (1052)
|||..|..+.... . ++... ......+.+++++++++++++++++++++++++++..+..+. .+.....
T Consensus 603 ~n~~lc~~~~~~~-~---~~c~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (968)
T PLN00113 603 GNIDLCGGDTTSG-L---PPCKR-----VRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQ 673 (968)
T ss_pred CCccccCCccccC-C---CCCcc-----ccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccc
Confidence 9999965332211 1 11110 011111222222222222222222233333333322111111 1110000
Q ss_pred -ec-CCCCccchhhHHHhhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCcee
Q 001562 758 -FA-DTPAELTYDNVVRATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLV 834 (1052)
Q Consensus 758 -~~-~~~~~~~~~~~~~~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv 834 (1052)
+. .....++++++ ...|...++||+|+||+||+|.. .++..||||++...... ..+|++.+++++||||+
T Consensus 674 ~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv 746 (968)
T PLN00113 674 FFDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIV 746 (968)
T ss_pred ccccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcc
Confidence 00 01112233333 34577788999999999999976 57899999988643322 23568899999999999
Q ss_pred eEEEEEecCCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCc
Q 001562 835 TLIGYYVGEAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELN 914 (1052)
Q Consensus 835 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~ 914 (1052)
+++++|.+++..++||||+++|+|.++++. ++|.++.+++.|+++|++|||..+.++|+||||||+||+++.++.
T Consensus 747 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~ 821 (968)
T PLN00113 747 KLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDE 821 (968)
T ss_pred eEEEEEEcCCCCEEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCc
Confidence 999999999999999999999999999953 789999999999999999999666669999999999999999988
Q ss_pred EEEEeccccccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHH
Q 001562 915 AYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWA 994 (1052)
Q Consensus 915 ~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 994 (1052)
.++. ||.+..... .....+++.|+|||++.+..++.++|||||||++|||+||+.||+.... ......+|.
T Consensus 822 ~~~~-~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~---~~~~~~~~~ 892 (968)
T PLN00113 822 PHLR-LSLPGLLCT-----DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG---VHGSIVEWA 892 (968)
T ss_pred eEEE-ecccccccc-----CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC---CCCcHHHHH
Confidence 8876 665543221 1223678999999999999999999999999999999999999965433 345677777
Q ss_pred HHHHHhCCccccccchhhcC--CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 995 KLLIKEGRSSELFLPELWEA--GPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~~--~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
+...........+++.+... .+.++..++.+++.+||+.||++||+|+|+++.|+++
T Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 893 RYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred HHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 76655554444555555332 3456677889999999999999999999999999875
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.3e-57 Score=583.36 Aligned_cols=515 Identities=32% Similarity=0.498 Sum_probs=466.3
Q ss_pred CCCCeeEecCCCceecCCCCccCCCCccEEEccCccccccCCcccc-CcCcCCeEecccccccccCCccccCCCCCcEEE
Q 001562 123 TELRTLSVPHNSFSGEIPAGVGELRLLEVLELQGNNFSGKIPYQMS-NLERLRVLNLSFNSFSGEVPRGLIGNGELSVID 201 (1052)
Q Consensus 123 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 201 (1052)
.+++.|+|++|+++|.+|..|..+++|++|+|++|+++|.+|..+. ++++|++|+|++|.+++.+|. ..+++|++|+
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~ 146 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLD 146 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEE
Confidence 4688999999999999999999999999999999999999998765 999999999999999998886 4589999999
Q ss_pred ccCCcccCccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEEEccCCCCC
Q 001562 202 MSSNRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVLDVSRNSLT 281 (1052)
Q Consensus 202 L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 281 (1052)
|++|.+++.+| ..++.+++|++|+|++|.+++.+|..++++++|++|++++|++.+.+|..++.+++|++|+|++|+++
T Consensus 147 Ls~n~~~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 147 LSNNMLSGEIP-NDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred CcCCcccccCC-hHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 99999987555 55788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCCCCeeecccCcccccCCCCCCccccccCCCchhhhcccCCcEeecCCCCCcccCCccccCCCCccEEeC
Q 001562 282 DRIPVELADCSKLSVLVLTNIDASLDLDNSRGEFSAFDGGVPYELLLSRSLEVLWAPRANLGGRLPDNWSESCSLKVLNL 361 (1052)
Q Consensus 282 ~~~p~~l~~l~~L~~L~L~~n~~~~~l~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L 361 (1052)
+.+|..++++++|+.|++++|.+ .+.+|..+..+++|+.|++++|.+.+.+|..+.++++|++|+|
T Consensus 226 ~~~p~~l~~l~~L~~L~L~~n~l--------------~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 291 (968)
T PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNL--------------TGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDL 291 (968)
T ss_pred CcCChhHhcCCCCCEEECcCcee--------------ccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEEC
Confidence 99999999999999999998654 4667888999999999999999999999999999999999999
Q ss_pred CCCcccccCCccccccCCCCEEeCCCCcCccCCCCCC-CCCccceEecccCccccCCCCCccccccccCCcccccccccc
Q 001562 362 GQNSLKGAVPKSLGMCRNLTYLDLSLNNLEGYLPMQL-PVPCMVYFNVSQNNITGVLPRFENVSCDNHFGFQDLQYANVP 440 (1052)
Q Consensus 362 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~l~~~~~~ 440 (1052)
++|.+++.+|..+.++++|++|++++|++++.+|..+ .+++|+.|++++|++++.+|..
T Consensus 292 s~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~-------------------- 351 (968)
T PLN00113 292 SDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKN-------------------- 351 (968)
T ss_pred cCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChH--------------------
Confidence 9999999999999999999999999999999988776 4899999999999999887742
Q ss_pred ccCcccccceeeeeeccCCccccccCcccccccccccccchhHHhhccCCcccCCCCCccccccCCCcceEEecCccccc
Q 001562 441 VMGSISDENFVIIHDFSGNKFLGSLPLFAIGDGFLAAKYKPHYRLLLNNNMFNGSVPGERISKCNDLQSFSVNLSANLLS 520 (1052)
Q Consensus 441 ~~~~~~~~~~l~~l~ls~n~~~g~~p~~~~~~~~~~~~~~~~~~l~l~~n~~~~~~p~~~~~~~~~l~~~~l~l~~n~l~ 520 (1052)
+.....+..+|+++|++.|.+|.... ....+..+.+.+|.+.+.+|.. ++.+.+|+ .+++++|.++
T Consensus 352 ----l~~~~~L~~L~Ls~n~l~~~~p~~~~-------~~~~L~~L~l~~n~l~~~~p~~-~~~~~~L~--~L~L~~n~l~ 417 (968)
T PLN00113 352 ----LGKHNNLTVLDLSTNNLTGEIPEGLC-------SSGNLFKLILFSNSLEGEIPKS-LGACRSLR--RVRLQDNSFS 417 (968)
T ss_pred ----HhCCCCCcEEECCCCeeEeeCChhHh-------CcCCCCEEECcCCEecccCCHH-HhCCCCCC--EEECcCCEee
Confidence 22334577899999999998885432 2334567899999999988864 56777777 4678999998
Q ss_pred ccchHHHHhcCCCceEEEccCcccccccccccCCCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCCccCCcCchhh
Q 001562 521 GMSYEAFLLDCVQLVEFEAANNQISGSIAAGVGKLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGNNLTGEIPSQF 600 (1052)
Q Consensus 521 ~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 600 (1052)
+.....| ..++.|+.|++++|++++.+|..+..+++|+.|+|++|++.+.+|..+ ..++|+.|+|++|++++.+|..|
T Consensus 418 ~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~ 495 (968)
T PLN00113 418 GELPSEF-TKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKL 495 (968)
T ss_pred eECChhH-hcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhh
Confidence 7655544 689999999999999999999999999999999999999999998876 46899999999999999999999
Q ss_pred cCCcCCcEEEcCCCCCCCCCcchhcccccccceeccCCcCCCCCCcccccccccCeEecccCcCCCCCCc----cccccc
Q 001562 601 GHLISLVVLDLSHNALTGSIPASLTKATKLESLFLAHNRLSGEIPVSFSTLVNLSALDLSFNNLSGHIPH----LQHLDC 676 (1052)
Q Consensus 601 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~----~~~l~~ 676 (1052)
.++++|++|+|++|++++.+|..+.++++|+.|+|++|++++.+|..|..+++|+.|+|++|+++|.+|. +.+|..
T Consensus 496 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 575 (968)
T PLN00113 496 GSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQ 575 (968)
T ss_pred hhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCE
Confidence 9999999999999999999999999999999999999999999999999999999999999999998885 346889
Q ss_pred ccccCCccccCCCC
Q 001562 677 IAFKGNKYLASCPD 690 (1052)
Q Consensus 677 ~~~~~n~~~~~~~~ 690 (1052)
+++.+|++.+..|.
T Consensus 576 l~ls~N~l~~~~p~ 589 (968)
T PLN00113 576 VNISHNHLHGSLPS 589 (968)
T ss_pred EeccCCcceeeCCC
Confidence 99999999866654
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-47 Score=424.28 Aligned_cols=289 Identities=46% Similarity=0.774 Sum_probs=254.5
Q ss_pred CCCccchhhHHHhhCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEE
Q 001562 761 TPAELTYDNVVRATGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYY 840 (1052)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 840 (1052)
....|+|+++..++++|.-..+||+|+||.||+|...+|+.||||++.....+...+|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 56678999999999999999999999999999999998899999988765543135699999999999999999999999
Q ss_pred ecCC-eEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEe
Q 001562 841 VGEA-EMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSD 919 (1052)
Q Consensus 841 ~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~D 919 (1052)
.+.+ +.++|||||++|+|.++++......++|.++.+||.++|+|++|||+.+.+.||||||||+|||+|+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9988 599999999999999999987533889999999999999999999999988999999999999999999999999
Q ss_pred ccccccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 001562 920 FGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIK 999 (1052)
Q Consensus 920 fgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
||+|+..............||.+|+|||++..+..+.|+|||||||++.|++||+.|.+...+. ....+.+|++..+.
T Consensus 221 FGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~--~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 221 FGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPR--GELSLVEWAKPLLE 298 (361)
T ss_pred ccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCc--ccccHHHHHHHHHH
Confidence 9999755431111111117999999999999999999999999999999999999998865422 34458999999999
Q ss_pred hCCccccccchhh-cCCCH-HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1000 EGRSSELFLPELW-EAGPQ-ENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1000 ~~~~~~~~~~~l~-~~~~~-~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.++..+.+|+.+. ..++. .+...+.+++.+|++.+|++||+|.||+++|+.+
T Consensus 299 ~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 299 EGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred CcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 9999999999987 55554 6888899999999999999999999999999764
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-46 Score=406.12 Aligned_cols=262 Identities=28% Similarity=0.446 Sum_probs=227.8
Q ss_pred hhHHHhhCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEE
Q 001562 768 DNVVRATGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 768 ~~~~~~~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 847 (1052)
+..+.....+.+.+.||+|.||+||.|.+.....||+|.++..... .++|.+|+++|++++|++||+++|+|..++.+|
T Consensus 199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~-~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piy 277 (468)
T KOG0197|consen 199 DPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS-PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIY 277 (468)
T ss_pred CCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC-hhHHHHHHHHHHhCcccCeEEEEEEEecCCceE
Confidence 3334444456778899999999999999998889999999876433 478899999999999999999999999988999
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
||||||+.|+|.+||+...+..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..|||+|||+|+...
T Consensus 278 IVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 278 IVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIG 354 (468)
T ss_pred EEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccC
Confidence 999999999999999987778899999999999999999999999 99999999999999999999999999999766
Q ss_pred ccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 928 VSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 928 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.+.+.......-+..|+|||++..+.++.|||||||||+||||+| |+.||. ++...+..+.+.+..+..
T Consensus 355 d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~--------~msn~ev~~~le~GyRlp-- 424 (468)
T KOG0197|consen 355 DDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYP--------GMSNEEVLELLERGYRLP-- 424 (468)
T ss_pred CCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCC--------CCCHHHHHHHHhccCcCC--
Confidence 666666666677889999999999999999999999999999999 677665 445556666555444333
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.|..++..+.++|..||+.+|++|||++.+...++++
T Consensus 425 --------~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 425 --------RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred --------CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence 3566777899999999999999999999999988865
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-44 Score=393.26 Aligned_cols=256 Identities=34% Similarity=0.565 Sum_probs=214.4
Q ss_pred CCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhh--HHHHHHHHHHhccCCcCceeeEEEEEecCC-eEEEEEe
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQG--IQQFDAEIGTLGRIRHKNLVTLIGYYVGEA-EMFLVYN 851 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 851 (1052)
..+.+.+.+|+|+||+||+|.++....||||++....... .++|.+|+.+|.+++|||||+++|+|.+.. ..++|||
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtE 120 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTE 120 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEE
Confidence 3455566799999999999999844449999997654332 468999999999999999999999999887 7999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCC-eeecCCCCCCEEECCCC-cEEEEecccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPR-IVHRDIKPSNILLDEEL-NAYLSDFGLARLLEVS 929 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~-iiHrDik~~Nill~~~~-~~kl~Dfgla~~~~~~ 929 (1052)
|+++|+|.++++......+++..+.+++.|||+||+|||++ + |||||+||+|||++.++ ++||+|||+++.....
T Consensus 121 y~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 121 YMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred eCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 99999999999885457899999999999999999999999 7 99999999999999997 9999999999866533
Q ss_pred ccccccCcccccccccccccc--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc
Q 001562 930 ETHATTDVAGTFGYVAPEYAT--TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF 1007 (1052)
Q Consensus 930 ~~~~~~~~~g~~~y~aPE~~~--~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
. .......||+.|||||++. ...|+.|+||||||+++|||+||+.||.... ..+.+..+...+....
T Consensus 198 ~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~--------~~~~~~~v~~~~~Rp~-- 266 (362)
T KOG0192|consen 198 K-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLA--------PVQVASAVVVGGLRPP-- 266 (362)
T ss_pred c-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhcCCCCC--
Confidence 2 2333368999999999999 5689999999999999999999999998432 2333444443333322
Q ss_pred cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1008 LPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1008 ~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.|..++..+..++.+||+.||++||++.+++..|+.+
T Consensus 267 -------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 267 -------IPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred -------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 2333566699999999999999999999999999865
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=369.36 Aligned_cols=252 Identities=29% Similarity=0.453 Sum_probs=210.6
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccC-chhhHHHHHHHHHHhccCCcCceeeEEEEEecCC-eEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIG-RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA-EMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 852 (1052)
+.+..+.||+|..|+||++.++ +++.+|+|++... +....+++.+|++++++.+||+||.+||+|.... ..+++|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 4566789999999999999776 5889999999544 3344688999999999999999999999999988 59999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
|++|||++++... +++++....+++.+|++||.|||+.. +||||||||+|||+...|++||||||.+..+-.+
T Consensus 160 MDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--- 232 (364)
T KOG0581|consen 160 MDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--- 232 (364)
T ss_pred cCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccccHHhhhh---
Confidence 9999999999876 57999999999999999999999632 9999999999999999999999999999877544
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
.....+||..|||||.+.+..|+.++||||||+.++|+.+|+.||.+..+. .....+....+..+ .. |.+.
T Consensus 233 ~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~---~~~~~~Ll~~Iv~~-pp-----P~lP 303 (364)
T KOG0581|consen 233 IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP---YLDIFELLCAIVDE-PP-----PRLP 303 (364)
T ss_pred hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC---CCCHHHHHHHHhcC-CC-----CCCC
Confidence 445678999999999999999999999999999999999999999876332 22233333333221 11 1222
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.. ....++++++..|++.||.+||+++|+++
T Consensus 304 ~~---~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 304 EG---EFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred cc---cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11 24556999999999999999999999875
No 7
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.7e-43 Score=403.24 Aligned_cols=259 Identities=29% Similarity=0.437 Sum_probs=223.6
Q ss_pred HhhCCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCchh-hHHHHHHHHHHhccCCcCceeeEEEEEecCC
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGRFQ-GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA 844 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 844 (1052)
....+.+..+.||+|+||+||+|+.. +...||||.++..... ..++|++|++++..++|||||+++|+|.+++
T Consensus 483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD 562 (774)
T ss_pred echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence 34455677789999999999999654 3577999999877665 6889999999999999999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhcc--------CCC----ccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC
Q 001562 845 EMFLVYNFLSGGNLETFIHKKS--------GKK----IQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE 912 (1052)
Q Consensus 845 ~~~lv~e~~~~gsL~~~l~~~~--------~~~----l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~ 912 (1052)
.+|+|+|||..|||.+||..+. +.. ++..+.+.||.|||.||+||.++ .+|||||.++|+||.++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccc
Confidence 9999999999999999997653 233 88899999999999999999999 99999999999999999
Q ss_pred CcEEEEecccccccccccccccc-CccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcch
Q 001562 913 LNAYLSDFGLARLLEVSETHATT-DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNI 990 (1052)
Q Consensus 913 ~~~kl~Dfgla~~~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~ 990 (1052)
..|||+|||+++.+...+++... ...-+.+||+||.|..++|+.+||||||||++||+++ |+-||++-..
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn-------- 711 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN-------- 711 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch--------
Confidence 99999999999988877877665 4556789999999999999999999999999999999 8888874322
Q ss_pred HHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 991 VSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+.+ ..++.+... ..|..++.++.+|+.+||+..|++||+++||-..|+.+
T Consensus 712 ~EVI-e~i~~g~lL---------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~ 762 (774)
T KOG1026|consen 712 QEVI-ECIRAGQLL---------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW 762 (774)
T ss_pred HHHH-HHHHcCCcc---------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence 2333 344444432 35778888899999999999999999999999988753
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-42 Score=360.19 Aligned_cols=200 Identities=30% Similarity=0.550 Sum_probs=181.2
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccC--chhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIG--RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
.++|.+.+.||+|+||+||+|+++ ++..||||.+... ..+..+-...|+.+++.++|||||++++++..++.+|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 457889999999999999999775 5799999999776 4455677889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC------CcEEEEeccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE------LNAYLSDFGLAR 924 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~------~~~kl~Dfgla~ 924 (1052)
|||.||+|.+|++++. .+++..+..++.|+|.|+++||++ +||||||||+|||++.. -.+||+|||+|+
T Consensus 89 EyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 9999999999999874 799999999999999999999999 99999999999999765 468999999999
Q ss_pred cccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 001562 925 LLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPS 980 (1052)
Q Consensus 925 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~ 980 (1052)
...+. ......+|++-|||||+++..+|+.|+|+||+|+++|||++|++||+..
T Consensus 164 ~L~~~--~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 164 FLQPG--SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred hCCch--hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 88633 3344568999999999999999999999999999999999999999843
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.6e-43 Score=364.57 Aligned_cols=252 Identities=29% Similarity=0.442 Sum_probs=209.3
Q ss_pred hCCCcccceeeecCceEEEEE-EecCCeEEEEEEeccCchh-------hHHHHHHHHHHhccCCcCceeeEEEEEecCCe
Q 001562 774 TGNFSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIGRFQ-------GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAE 845 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 845 (1052)
.+.|.+.+.||+|+||.|-+| +.++|+.||||++...... ......+|+++|++++|||||+++++|...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 356888999999999999999 5668999999999654322 22345799999999999999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC---CcEEEEeccc
Q 001562 846 MFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE---LNAYLSDFGL 922 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~---~~~kl~Dfgl 922 (1052)
.|+||||++||+|.+++-.+ +.+.+.....+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+|||+
T Consensus 251 ~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred eEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccch
Confidence 99999999999999998766 4688888899999999999999999 99999999999999766 6799999999
Q ss_pred cccccccccccccCccccccccccccccCCCCC---chhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 001562 923 ARLLEVSETHATTDVAGTFGYVAPEYATTCRVS---DKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIK 999 (1052)
Q Consensus 923 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~---~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
|+..+ +...+...+|||.|.|||++.+..+. .+.|+||+||++|-+++|.+||....... -....+.
T Consensus 326 AK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--------sl~eQI~ 395 (475)
T KOG0615|consen 326 AKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--------SLKEQIL 395 (475)
T ss_pred hhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--------cHHHHHh
Confidence 99776 44556677999999999999876533 47899999999999999999998654331 1333444
Q ss_pred hCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1000 EGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1000 ~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.|+.. +.|..|. +..++..++|.+|+..||++|||++|+++
T Consensus 396 ~G~y~--f~p~~w~----~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 396 KGRYA--FGPLQWD----RISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred cCccc--ccChhhh----hhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 44443 3344443 34556899999999999999999999875
No 10
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-41 Score=374.32 Aligned_cols=247 Identities=26% Similarity=0.404 Sum_probs=212.7
Q ss_pred CCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccC---chhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIG---RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
.+|...+.||+|||+.+|+++. .+|+.||+|++... .....+...+|+++.++++|||||+++++|++...+|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5799999999999999999976 78999999999653 3344577889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
|+|+.++|..+++++ +.+++.++..+.+||+.|+.|||+. +|+|||||..|++++++.+|||+|||+|..+....
T Consensus 98 ELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 999999999999854 6899999999999999999999999 99999999999999999999999999999886433
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
......+|||.|.|||++....++..+||||+||++|-|+.|++||+. ..+.+....+.. ....
T Consensus 173 -Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet--------k~vkety~~Ik~-~~Y~------ 236 (592)
T KOG0575|consen 173 -ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET--------KTVKETYNKIKL-NEYS------ 236 (592)
T ss_pred -cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc--------chHHHHHHHHHh-cCcc------
Confidence 344557899999999999999999999999999999999999999983 223333333322 2211
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.|........+||.++++++|.+|||+++|+.
T Consensus 237 ----~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 237 ----MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ----cccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 12334455889999999999999999999985
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-42 Score=344.55 Aligned_cols=254 Identities=28% Similarity=0.444 Sum_probs=210.4
Q ss_pred CCCcccceeeecCceEEEEE-EecCCeEEEEEEeccC--chhhHHHHHHHHHHhccCCcCceeeEEE-EEecCCe-EEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIG--RFQGIQQFDAEIGTLGRIRHKNLVTLIG-YYVGEAE-MFLV 849 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~lv 849 (1052)
.+|++.++||+|.||+||++ ...+|..||.|.+.-. +.+..++...|+.++++++|||||++++ .+.++.+ +++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 45889999999999999999 4567999999988643 3445677899999999999999999999 4555555 8999
Q ss_pred EeecCCCCHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCEEECCCCcEEEEecccccc
Q 001562 850 YNFLSGGNLETFIHKKS--GKKIQWSVIHKIAIDIAQALAYLHYSCVPR--IVHRDIKPSNILLDEELNAYLSDFGLARL 925 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~--iiHrDik~~Nill~~~~~~kl~Dfgla~~ 925 (1052)
||++.+|+|.+.++..+ .+.+++..+++++.|++.|+.++|++.. + |+||||||.||+++++|.||++|||+++.
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~-r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIP-RGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcccc-ccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 99999999999987643 4679999999999999999999999532 4 88999999999999999999999999998
Q ss_pred ccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 926 LEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 926 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
+.. ........+|||.||+||.+.+..|+.+|||||+||++|||+.-.+||++. ++.+..+.+ ..++...
T Consensus 178 l~s-~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--------n~~~L~~KI-~qgd~~~ 247 (375)
T KOG0591|consen 178 LSS-KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--------NLLSLCKKI-EQGDYPP 247 (375)
T ss_pred hcc-hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--------cHHHHHHHH-HcCCCCC
Confidence 764 344556688999999999999999999999999999999999999999842 455544444 4444332
Q ss_pred cccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1006 LFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1006 ~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
.. ..-...++..||..|+.+||+.||+...+++.
T Consensus 248 ~p--------~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 248 LP--------DEHYSTDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred Cc--------HHHhhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence 21 13456679999999999999999985444443
No 12
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-42 Score=385.37 Aligned_cols=254 Identities=26% Similarity=0.430 Sum_probs=218.1
Q ss_pred CCcccceeeecCceEEEEEEecC----CeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELVP----GYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
...|.++||.|.||+||+|+++. ...||||.++.... +...+|..|+.+|.++.||||+++.|+......+++|+
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 34578999999999999997653 46799999987644 45678999999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
|||++|+|+.||+.+++ ++++.++.-+.++||.||.||.+. ++|||||.++||||+.+..+|++|||+++.+....
T Consensus 710 EyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred hhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 99999999999999874 599999999999999999999999 99999999999999999999999999999875433
Q ss_pred c--ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc
Q 001562 931 T--HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF 1007 (1052)
Q Consensus 931 ~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
. +......-+.+|.|||++..++++.+|||||||++|||.++ |.+||... +-++.++.+..+-+.
T Consensus 786 ~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm--------SNQdVIkaIe~gyRL---- 853 (996)
T KOG0196|consen 786 EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--------SNQDVIKAIEQGYRL---- 853 (996)
T ss_pred CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc--------chHHHHHHHHhccCC----
Confidence 2 22233345679999999999999999999999999999887 99998733 333444444333222
Q ss_pred cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1008 LPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1008 ~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..|++++..+.+|+.+||+.|-.+||.+.|++..|+++
T Consensus 854 ------PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl 891 (996)
T KOG0196|consen 854 ------PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL 891 (996)
T ss_pred ------CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 33678888899999999999999999999999999875
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=346.35 Aligned_cols=243 Identities=28% Similarity=0.410 Sum_probs=206.5
Q ss_pred hhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
..++|++.++||+|+||+||.++. .+++.+|+|++++.. ..+.+...+|..++.+++||+||+++-.|++.+..|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 346799999999999999999955 468999999987653 3346778899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
|+||+.||.|..+|++. ..+++..+.-++..|+.||.|||++ ||||||+||+|||+|++|.++|+|||+++..-
T Consensus 103 Vld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~- 176 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDL- 176 (357)
T ss_pred EEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcc-
Confidence 99999999999999876 4799999999999999999999999 99999999999999999999999999998543
Q ss_pred cccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.....+...+||+.|||||++.+..|+.++|.||+|+++|||++|.+||... +...+.+.+.......
T Consensus 177 ~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~--------~~~~~~~~I~~~k~~~---- 244 (357)
T KOG0598|consen 177 KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE--------DVKKMYDKILKGKLPL---- 244 (357)
T ss_pred cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc--------cHHHHHHHHhcCcCCC----
Confidence 2334455579999999999999999999999999999999999999999843 3445555554443111
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCC
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRP 1039 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RP 1039 (1052)
.+.-...+.++++.+.+..||++|.
T Consensus 245 ------~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 245 ------PPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ------CCccCCHHHHHHHHHHhccCHHHhc
Confidence 1111334588999999999999996
No 14
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.1e-44 Score=373.56 Aligned_cols=496 Identities=27% Similarity=0.366 Sum_probs=329.1
Q ss_pred cchhhhCCCCCCeeEecCCCceecCCCCccCCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCccccCC
Q 001562 115 LSASIAKLTELRTLSVPHNSFSGEIPAGVGELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGN 194 (1052)
Q Consensus 115 l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 194 (1052)
+.+.+.+|..|++|++++|+++ +.|++++.+..++.|+.++|+++ .+|.+++.+.+|+.|+.++|.+. ++|+.++.+
T Consensus 60 l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~ 136 (565)
T KOG0472|consen 60 LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRL 136 (565)
T ss_pred ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHH
Confidence 3455667777777777777777 66777777777777777777777 67777777777777777777776 666677777
Q ss_pred CCCcEEEccCCcccCccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEEE
Q 001562 195 GELSVIDMSSNRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVLD 274 (1052)
Q Consensus 195 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 274 (1052)
..|+.++..+|+++. +| ..+.++.+|..|++.+|+++...|..+. ++.|++|+...|.++ .+|..++.+.+|+.|+
T Consensus 137 ~~l~dl~~~~N~i~s-lp-~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~Ly 212 (565)
T KOG0472|consen 137 LDLEDLDATNNQISS-LP-EDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLY 212 (565)
T ss_pred hhhhhhhcccccccc-Cc-hHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHH
Confidence 777777777777764 22 3344566666666777776654444443 666677776666665 6666666666677777
Q ss_pred ccCCCCCCCCCcccccCCCCCeeecccCcccccCCCCCCccccccCCCchhhhcccCCcEeecCCCCCcccCCcc-ccCC
Q 001562 275 VSRNSLTDRIPVELADCSKLSVLVLTNIDASLDLDNSRGEFSAFDGGVPYELLLSRSLEVLWAPRANLGGRLPDN-WSES 353 (1052)
Q Consensus 275 L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~l~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~-~~~~ 353 (1052)
|.+|++. ..| +|..++.|+.|+++. |++. .+|+. .+.+
T Consensus 213 L~~Nki~-~lP-ef~gcs~L~Elh~g~--------------------------------------N~i~-~lpae~~~~L 251 (565)
T KOG0472|consen 213 LRRNKIR-FLP-EFPGCSLLKELHVGE--------------------------------------NQIE-MLPAEHLKHL 251 (565)
T ss_pred hhhcccc-cCC-CCCccHHHHHHHhcc--------------------------------------cHHH-hhHHHHhccc
Confidence 7777666 344 666666666666554 4433 33433 3467
Q ss_pred CCccEEeCCCCcccccCCccccccCCCCEEeCCCCcCccCCCCCCCCCccceEecccCccccCCCCCccccccccCCccc
Q 001562 354 CSLKVLNLGQNSLKGAVPKSLGMCRNLTYLDLSLNNLEGYLPMQLPVPCMVYFNVSQNNITGVLPRFENVSCDNHFGFQD 433 (1052)
Q Consensus 354 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~ 433 (1052)
.+|.+|||..|+++ ..|+.++.+++|++||+|+|.+++.++....+ +|+.|-+.+|.+..+-. +.+++.+.--++.
T Consensus 252 ~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlrTiRr--~ii~~gT~~vLKy 327 (565)
T KOG0472|consen 252 NSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRR--EIISKGTQEVLKY 327 (565)
T ss_pred ccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCchHHHHH--HHHcccHHHHHHH
Confidence 77777777777777 67777777777777777777777655443334 77777777777653311 1111111111111
Q ss_pred cccccccccCcccccceeeeeeccCCccccccCccccccccccccc--chhHHhhccCCcccCCCCCccccccCCCcceE
Q 001562 434 LQYANVPVMGSISDENFVIIHDFSGNKFLGSLPLFAIGDGFLAAKY--KPHYRLLLNNNMFNGSVPGERISKCNDLQSFS 511 (1052)
Q Consensus 434 l~~~~~~~~~~~~~~~~l~~l~ls~n~~~g~~p~~~~~~~~~~~~~--~~~~~l~l~~n~~~~~~p~~~~~~~~~l~~~~ 511 (1052)
+.-.- .-..++. .=++-.-.+..|... +.+.+ .....|.++.-+++ .+|++.|....+-....
T Consensus 328 Lrs~~--~~dglS~-------se~~~e~~~t~~~~~-----~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~ 392 (565)
T KOG0472|consen 328 LRSKI--KDDGLSQ-------SEGGTETAMTLPSES-----FPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTS 392 (565)
T ss_pred HHHhh--ccCCCCC-------CcccccccCCCCCCc-----ccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEE
Confidence 00000 0000000 000000111111111 11111 12344555555554 68899888777666678
Q ss_pred EecCcccccccchHHHHhcCCC-ceEEEccCcccccccccccCCCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCC
Q 001562 512 VNLSANLLSGMSYEAFLLDCVQ-LVEFEAANNQISGSIAAGVGKLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGN 590 (1052)
Q Consensus 512 l~l~~n~l~~~~~~~~~~~~~~-L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 590 (1052)
+++++|++..+|...- .++. ++.+.+++|.++ .+|..++.+++|..|+|++|-+. .+|.+++.+..|+.|++|.|
T Consensus 393 VnfskNqL~elPk~L~--~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~N 468 (565)
T KOG0472|consen 393 VNFSKNQLCELPKRLV--ELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFN 468 (565)
T ss_pred EecccchHhhhhhhhH--HHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheeccccc
Confidence 9999999999997643 2233 345667777766 89999999999999999999998 89999999999999999999
Q ss_pred ccCCcCchhhcCCcCCcEEEcCCCCCCCCCcchhcccccccceeccCCcCCCCCCcccccccccCeEecccCcCCCCCCc
Q 001562 591 NLTGEIPSQFGHLISLVVLDLSHNALTGSIPASLTKATKLESLFLAHNRLSGEIPVSFSTLVNLSALDLSFNNLSGHIPH 670 (1052)
Q Consensus 591 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 670 (1052)
+|. .+|..+..+..|+.+-.++|++....|..+.+|.+|+.|||.+|.|. .+|..++++++|++|+++||+|+ .+++
T Consensus 469 rFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr-~Pr~ 545 (565)
T KOG0472|consen 469 RFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR-QPRH 545 (565)
T ss_pred ccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC-CCHH
Confidence 999 89998888888888888889999766667999999999999999999 78899999999999999999998 3332
Q ss_pred c----cccccccccCCcc
Q 001562 671 L----QHLDCIAFKGNKY 684 (1052)
Q Consensus 671 ~----~~l~~~~~~~n~~ 684 (1052)
. .+...+.+.+++.
T Consensus 546 ~iLmkgT~aiL~ylrdrI 563 (565)
T KOG0472|consen 546 QILMKGTAAILSYLRDRI 563 (565)
T ss_pred HHhccChHHHHHHhcccC
Confidence 1 1344455555543
No 15
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-40 Score=390.55 Aligned_cols=257 Identities=26% Similarity=0.414 Sum_probs=217.7
Q ss_pred hCCCcccceeeecCceEEEEEEecC--C----eEEEEEEeccC-chhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP--G----YLVAVKKLSIG-RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEM 846 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~--~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 846 (1052)
....+..+.||+|+||+||+|...+ + ..||||.++.. +.++..+|.+|..+|+.++|||||+++|+|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 4556778899999999999996653 3 34899988655 445678999999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhcc-----CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecc
Q 001562 847 FLVYNFLSGGNLETFIHKKS-----GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFG 921 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfg 921 (1052)
++++|||++|+|..|+++.+ ...++..+...++.|||+|+.||+++ ++|||||.++|+|+++...|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccc
Confidence 99999999999999998863 35688999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCc-cccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHH
Q 001562 922 LARLLEVSETHATTDV-AGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIK 999 (1052)
Q Consensus 922 la~~~~~~~~~~~~~~-~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
+|+.+...+++..... .-+.+|||||.+..+.++.|+|||||||++||++| |..||. .. +-.+....+..
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~-~~-------~n~~v~~~~~~ 919 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYP-SR-------SNFEVLLDVLE 919 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCC-Cc-------chHHHHHHHHh
Confidence 9997766666655544 45679999999999999999999999999999999 555554 22 22344444555
Q ss_pred hCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1000 EGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1000 ~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
+++. +.|..++..+.++|..||+.+|++||++..+++.+.++
T Consensus 920 ggRL----------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i 961 (1025)
T KOG1095|consen 920 GGRL----------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAI 961 (1025)
T ss_pred CCcc----------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhh
Confidence 5532 23566777899999999999999999999999987764
No 16
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-39 Score=342.56 Aligned_cols=267 Identities=30% Similarity=0.495 Sum_probs=211.0
Q ss_pred hCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhcc--CCcCceeeEEEEEecCC----eEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGR--IRHKNLVTLIGYYVGEA----EMF 847 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~ 847 (1052)
....++.+++|+|+||.||+|.+. ++.||||++... +.+.|.+|-++.+. ++|+||++++++-...+ +++
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 345677789999999999999887 689999999743 34566666666655 58999999999876555 899
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcC------CCCeeecCCCCCCEEECCCCcEEEEecc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSC------VPRIVHRDIKPSNILLDEELNAYLSDFG 921 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~------~~~iiHrDik~~Nill~~~~~~kl~Dfg 921 (1052)
+|+||.+.|+|.+||..+ .++|....+|+..+++||+|||+.. .|+|+|||||++||||.+|+++.|+|||
T Consensus 285 LVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG 361 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG 361 (534)
T ss_pred EEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence 999999999999999886 5999999999999999999999864 3789999999999999999999999999
Q ss_pred cccccccccc-ccccCccccccccccccccCCCC-C-----chhHHHHHHHHHHHHHhCCCCCCC--------Ccc-cCC
Q 001562 922 LARLLEVSET-HATTDVAGTFGYVAPEYATTCRV-S-----DKADVYSFGVVLLELISGKRSLDP--------SFS-EYG 985 (1052)
Q Consensus 922 la~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~-~-----~~sDv~slG~il~elltg~~p~~~--------~~~-~~~ 985 (1052)
+|..+.+... ......+||.+|||||++.+... . .+.||||+|.++|||+++...+++ .++ +-+
T Consensus 362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG 441 (534)
T KOG3653|consen 362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVG 441 (534)
T ss_pred eeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhc
Confidence 9998875443 23344789999999999987532 2 368999999999999997755531 222 223
Q ss_pred CCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 986 NGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
....+.++...+.++..... .++.|... ..+..+.+.+.+||..||+.|.|+.=+-+++.++
T Consensus 442 ~hPt~e~mq~~VV~kK~RP~--~p~~W~~h--~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l 503 (534)
T KOG3653|consen 442 NHPTLEEMQELVVRKKQRPK--IPDAWRKH--AGMAVLCETIEECWDHDAEARLTAGCVEERMAEL 503 (534)
T ss_pred CCCCHHHHHHHHHhhccCCC--ChhhhhcC--ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHH
Confidence 34455555556665554432 34445443 4466799999999999999999998887777654
No 17
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=7.4e-40 Score=328.76 Aligned_cols=262 Identities=24% Similarity=0.344 Sum_probs=204.5
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh--hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
+.|+...++|+|+||+||+++.+ +|+.||||++...... -.+-.++|++++++++|||+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46888899999999999999776 5999999999655432 24456899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|++. ++.+-++... ..++.+.+.++..|++.|+.|+|++ +||||||||+||+++.++.+|+||||+|+.+.. ..
T Consensus 82 ~~dh-TvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pg 155 (396)
T KOG0593|consen 82 YCDH-TVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PG 155 (396)
T ss_pred ecch-HHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC-Cc
Confidence 9955 6666676665 5789999999999999999999999 999999999999999999999999999998763 33
Q ss_pred ccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHH----------HHHh
Q 001562 932 HATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKL----------LIKE 1000 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~----------~~~~ 1000 (1052)
...+.++.|..|.|||.+.+ ..|+...||||+||++.||++|.+-|.+. + +..++....+. ++..
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~-S---DiDQLy~I~ktLG~L~prhq~iF~~ 231 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR-S---DIDQLYLIRKTLGNLIPRHQSIFSS 231 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc-c---hHHHHHHHHHHHcccCHHHHHHhcc
Confidence 34456788999999999987 67999999999999999999999776532 1 12222222211 1111
Q ss_pred C-CccccccchhhcCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1001 G-RSSELFLPELWEAGP-----QENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1001 ~-~~~~~~~~~l~~~~~-----~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+ .....-.|+.....+ +....-+.++++.|++.||++|++-+|++.
T Consensus 232 N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 232 NPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1 111111121111111 233446889999999999999999998864
No 18
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-39 Score=344.92 Aligned_cols=253 Identities=32% Similarity=0.520 Sum_probs=206.2
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCC--eEEEEEe
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA--EMFLVYN 851 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e 851 (1052)
.+|...+.||+|+||.||++... +|+..|||.+...+....+.+.+|+.++++++|||||+.+|...... .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45788899999999999999665 48999999987665444677899999999999999999999854444 6899999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECC-CCcEEEEeccccccccc--
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDE-ELNAYLSDFGLARLLEV-- 928 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~-~~~~kl~Dfgla~~~~~-- 928 (1052)
|+++|+|.+++....+ .++++.+..++.||++|++|||++ ||+||||||+|||++. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999998876 899999999999999999999999 9999999999999999 79999999999987663
Q ss_pred cccccccCccccccccccccccCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTCR-VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF 1007 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
..........||+.|||||++..+. ..+++||||+||++.||+||++||... ... .......+... .
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-------~~~---~~~~~~ig~~~--~ 240 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-------FEE---AEALLLIGRED--S 240 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-------cch---HHHHHHHhccC--C
Confidence 2223344578999999999999633 345999999999999999999998732 111 22222222222 1
Q ss_pred cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1008 LPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1008 ~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
.| ..|...+....+++.+|+..||++||||.++++.
T Consensus 241 ~P----~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 241 LP----EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred CC----CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 12 2233445568899999999999999999999864
No 19
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=360.76 Aligned_cols=256 Identities=27% Similarity=0.407 Sum_probs=212.6
Q ss_pred hhCCCcccceeeecCceEEEEEEecCC-----eEEEEEEeccC---chhhHHHHHHHHHHhccCCcCceeeEEEEEecCC
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELVPG-----YLVAVKKLSIG---RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA 844 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~~~-----~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 844 (1052)
..++..+.++||+|+||+||+|.+..+ ..||||..+.. ......+|.+|+++|+.++|||||+++|++..+.
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE 234 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 344556679999999999999966532 23899988752 3456788999999999999999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccc
Q 001562 845 EMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLAR 924 (1052)
Q Consensus 845 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~ 924 (1052)
++++|||+|+||+|.+||++.. ..++..+...++.++|+||+|||++ +++||||.++|+|++.++.+||+|||+++
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcccccc
Confidence 9999999999999999999875 3799999999999999999999999 99999999999999999999999999987
Q ss_pred ccccccccccc-CccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCC
Q 001562 925 LLEVSETHATT-DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGR 1002 (1052)
Q Consensus 925 ~~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
... .+.... ...-+.+|+|||.+....++.++|||||||++||+++ |..||.+ ....+....+...+.
T Consensus 311 ~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g--------~~~~~v~~kI~~~~~ 380 (474)
T KOG0194|consen 311 AGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPG--------MKNYEVKAKIVKNGY 380 (474)
T ss_pred CCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCC--------CCHHHHHHHHHhcCc
Confidence 543 111111 2245689999999999999999999999999999999 7888873 333344444545554
Q ss_pred ccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1003 SSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1003 ~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.... |...+..+..++.+||..+|++||+|.++.+.++.+
T Consensus 381 r~~~---------~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~ 420 (474)
T KOG0194|consen 381 RMPI---------PSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEAL 420 (474)
T ss_pred cCCC---------CCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHH
Confidence 4432 334456688999999999999999999999998865
No 20
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=9.5e-39 Score=315.96 Aligned_cols=260 Identities=25% Similarity=0.364 Sum_probs=210.7
Q ss_pred CCCcccceeeecCceEEEEE-EecCCeEEEEEEeccCchhh--HHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 775 GNFSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIGRFQG--IQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
.+|...+++|+|.||.||+| +..+|+.||||+++..+..+ .....+|++.++.++|+||+.++++|...+.+.+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 46888899999999999999 56689999999998775443 3457899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
||+ .+|...++... ..++..++.+++.++++|++|+|++ .|+||||||.|+|++++|.+||+|||+|+.+.....
T Consensus 82 fm~-tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred ecc-ccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 994 69999998764 7899999999999999999999999 999999999999999999999999999998875444
Q ss_pred ccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 932 HATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
.... .+.|..|.|||.+.| +.|+...||||.|||+.||+.|.+-|.+ ..++.+.......-|...+...|+
T Consensus 157 ~~~~-~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG-------~sDidQL~~If~~LGTP~~~~WP~ 228 (318)
T KOG0659|consen 157 IQTH-QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPG-------DSDIDQLSKIFRALGTPTPDQWPE 228 (318)
T ss_pred cccc-ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCC-------CchHHHHHHHHHHcCCCCcccCcc
Confidence 3333 367899999999887 4589999999999999999988765542 223333333333344444433443
Q ss_pred hhcC--------CC--------HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1011 LWEA--------GP--------QENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1011 l~~~--------~~--------~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
+.+- .| +.+.....+++..|+..+|.+|.++.|++++
T Consensus 229 ~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 229 MTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 2110 11 2334557999999999999999999999864
No 21
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-39 Score=345.88 Aligned_cols=251 Identities=24% Similarity=0.404 Sum_probs=209.1
Q ss_pred HhhCCCcccceeeecCceEEEEEE-ecCCeEEEEEEeccC---chhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeE
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAE-LVPGYLVAVKKLSIG---RFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEM 846 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 846 (1052)
+...+|.+++.||+|+|++|++|+ ..+++.||||++.+. +....+.+..|-..|.++ .||.|++++..|+++..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 345679999999999999999994 457899999988543 223345567889999999 899999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccc
Q 001562 847 FLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLL 926 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~ 926 (1052)
|+|+||+++|+|.+++++. ..+++.....++.+|+.|++|||+. |||||||||+|||+|++++++|+|||.|+.+
T Consensus 150 YFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred EEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccC
Confidence 9999999999999999987 5799999999999999999999999 9999999999999999999999999999988
Q ss_pred cccccc---------c---ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHH
Q 001562 927 EVSETH---------A---TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWA 994 (1052)
Q Consensus 927 ~~~~~~---------~---~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 994 (1052)
.+.... . ....+||..|.+||++.+...++.+|+|+||||+|+|+.|.+||....+. ..+.
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney-------liFq 297 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY-------LIFQ 297 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH-------HHHH
Confidence 643211 1 13478999999999999999999999999999999999999999843322 2222
Q ss_pred HHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 995 KLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+.+..+- ..|+..++.+.+||++.+..||.+|+++.+|.+
T Consensus 298 kI~~l~y------------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 298 KIQALDY------------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHhcc------------cCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 2221111 123333456889999999999999999988865
No 22
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-39 Score=347.46 Aligned_cols=263 Identities=24% Similarity=0.368 Sum_probs=219.3
Q ss_pred hCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhh-HHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQG-IQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
.....+.++||+|.||+|..++...+..||||.++...... ..+|.+|+++|.+++||||++++|+|..++.+++|+||
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 34567889999999999999999888999999998765444 58899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
|++|+|.+|+.++......-....+|+.||+.||+||.+. ++||||+.++|+|+++++++||+|||+++.+...+++
T Consensus 617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCce
Confidence 9999999999988655556677788999999999999999 9999999999999999999999999999977666665
Q ss_pred ccc-CccccccccccccccCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 933 ATT-DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS--GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 933 ~~~-~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
..+ ..+-+.+|||||.+.-++++.++|||+||+++||+++ ...||..... .+.++-.......+..
T Consensus 694 ~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~-----e~vven~~~~~~~~~~------ 762 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD-----EQVVENAGEFFRDQGR------ 762 (807)
T ss_pred eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH-----HHHHHhhhhhcCCCCc------
Confidence 444 4567789999999999999999999999999999877 5667753221 1222222222222221
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
......|.-++.++.+++.+||..|-++||+++++...|.+
T Consensus 763 ~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 763 QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 12234467778889999999999999999999999988765
No 23
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-39 Score=352.48 Aligned_cols=249 Identities=26% Similarity=0.430 Sum_probs=213.6
Q ss_pred CCCcccceeeecCceEEEEE-EecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 775 GNFSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
..|...+.||+|+.|.||.| +..+++.||||++........+-+.+|+.+|+..+|+|||++++.|...+..++|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 35777789999999999999 55678999999998777666678899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
+||+|.|.+.... +++.++..|+.++++||+|||.+ ||+|||||.+|||++.+|.+||+|||++..+..... .
T Consensus 353 ~ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-K 425 (550)
T KOG0578|consen 353 EGGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-K 425 (550)
T ss_pred CCCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC-c
Confidence 9999999997754 99999999999999999999999 999999999999999999999999999998764443 5
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhc
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWE 1013 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1013 (1052)
....+|||.|||||++....|+++.||||||++++||+-|.+||-.+.+- . +...+..+...+.-
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl-------r--AlyLIa~ng~P~lk------ 490 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-------R--ALYLIATNGTPKLK------ 490 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH-------H--HHHHHhhcCCCCcC------
Confidence 56678999999999999999999999999999999999999999743222 1 22333333333221
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1014 AGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1014 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+......+.+++.+|++.||++||++.|+++
T Consensus 491 -~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 491 -NPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred -CccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 23344556999999999999999999999986
No 24
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-39 Score=353.28 Aligned_cols=263 Identities=29% Similarity=0.435 Sum_probs=211.3
Q ss_pred hhHHHhhCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCe
Q 001562 768 DNVVRATGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAE 845 (1052)
Q Consensus 768 ~~~~~~~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 845 (1052)
+++....+++.+.+.||+|.||+||+|.|.+ .||||++.... .+..+.|+.|+.++++-+|.||+-++|+|..+..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 3444555667888999999999999999873 49999997654 3457889999999999999999999999997766
Q ss_pred EEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccc
Q 001562 846 MFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARL 925 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~ 925 (1052)
.+|+.+|+|.+|+.+++..+ ..++..+...||.||++||.|||.+ +|||||+|+.||++.+++.|||+|||++..
T Consensus 463 -AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred -eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceee
Confidence 99999999999999998765 6789999999999999999999999 999999999999999999999999999975
Q ss_pred cccc-ccccccCccccccccccccccC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhC
Q 001562 926 LEVS-ETHATTDVAGTFGYVAPEYATT---CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEG 1001 (1052)
Q Consensus 926 ~~~~-~~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1052)
...- .........|..-|||||+++. .+|+.++||||||+++|||+||..||.....+ +.++.-|
T Consensus 538 k~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d-----------qIifmVG 606 (678)
T KOG0193|consen 538 KTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD-----------QIIFMVG 606 (678)
T ss_pred eeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh-----------heEEEec
Confidence 4321 1122223457788999999975 45889999999999999999999999732211 1122223
Q ss_pred CccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1002 RSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1002 ~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
+..-..|.. .....++.++.+|+..||..++++||.+.+++..|+.+
T Consensus 607 rG~l~pd~s---~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l 653 (678)
T KOG0193|consen 607 RGYLMPDLS---KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEEL 653 (678)
T ss_pred ccccCccch---hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHh
Confidence 221111111 11234566799999999999999999999999988764
No 25
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-39 Score=344.74 Aligned_cols=260 Identities=25% Similarity=0.336 Sum_probs=209.4
Q ss_pred hhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHH--HHHHHHHhccCC-cCceeeEEEEEecCC-eEE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQ--FDAEIGTLGRIR-HKNLVTLIGYYVGEA-EMF 847 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~ 847 (1052)
..++|.+.++||.|.||+||+|+. .+|..||||+++..-.. +++ -.+|++.++++. |||||++.+++.+.+ ..|
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 346799999999999999999954 46899999998754332 333 368999999998 999999999999888 999
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+||||| ..+|++.++.+ ++.++++++..|+.||++||+|+|++ |+.|||+||+|||+.....+||+|||+|+.+.
T Consensus 87 fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 87 FVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred eeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccc
Confidence 999999 67999999988 68999999999999999999999999 99999999999999988899999999999776
Q ss_pred ccccccccCcccccccccccccc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 928 VSETHATTDVAGTFGYVAPEYAT-TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 928 ~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.... .+.++.|..|.|||++. .+-|+.+.||||+|||++|+.+-++.|.+.. ...+..+...--|...+.
T Consensus 162 SkpP--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s-------E~Dqi~KIc~VLGtP~~~ 232 (538)
T KOG0661|consen 162 SKPP--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS-------EIDQIYKICEVLGTPDKD 232 (538)
T ss_pred cCCC--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc-------HHHHHHHHHHHhCCCccc
Confidence 4443 34568899999999875 5678999999999999999999998776432 223333333333333322
Q ss_pred ccchh----------hcCC--------CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1007 FLPEL----------WEAG--------PQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1007 ~~~~l----------~~~~--------~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
-+++. +... -+....+..+++.+|+++||++||||.|+++.
T Consensus 233 ~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 233 SWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred cchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 22220 0000 02356678999999999999999999999863
No 26
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-38 Score=332.52 Aligned_cols=261 Identities=26% Similarity=0.397 Sum_probs=210.3
Q ss_pred hCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhh-HHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQG-IQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
.+.|++..+||.|..++||+|.. ..++.||||++...+... .+.+.+|++.|+.++||||++++..|..+...|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 35799999999999999999965 458999999997665443 5788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
||.+||+.+.++..-...+++..+..|.+++++||.|||.+ |.||||||+.|||++++|.|||+|||.+..+..+..
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 99999999999988778899999999999999999999999 999999999999999999999999998876654332
Q ss_pred cc---ccCccccccccccccccC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 932 HA---TTDVAGTFGYVAPEYATT--CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 932 ~~---~~~~~g~~~y~aPE~~~~--~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.. ....+|++.|||||++.. ..|+.|+||||||++..|+.+|..||....+- .+... --.+.....
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm--------kvLl~-tLqn~pp~~ 252 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM--------KVLLL-TLQNDPPTL 252 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH--------HHHHH-HhcCCCCCc
Confidence 11 145689999999999543 56889999999999999999999999732211 11111 112222211
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
....+..+........+.+++..|+..||++|||++++++
T Consensus 253 ~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 253 LTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 1111111112233346899999999999999999999875
No 27
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=333.30 Aligned_cols=266 Identities=25% Similarity=0.394 Sum_probs=203.9
Q ss_pred hCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecC----CeEEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE----AEMFLV 849 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----~~~~lv 849 (1052)
..+..+.+.||+|.||+||+|+|+ |+.||||++...++..+.+ ++|+.--..++|+||+.+++.-..+ ++.++|
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE~SWfr-EtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLv 287 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDERSWFR-ETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLV 287 (513)
T ss_pred hheeEEEEEecCccccceeecccc-CCceEEEEecccchhhhhh-HHHHHHHHHhccchhhhhhhccccCCCceEEEEEe
Confidence 446888999999999999999998 8899999998665443222 3344444456999999999987644 468999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcC-----CCCeeecCCCCCCEEECCCCcEEEEeccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSC-----VPRIVHRDIKPSNILLDEELNAYLSDFGLAR 924 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~-----~~~iiHrDik~~Nill~~~~~~kl~Dfgla~ 924 (1052)
++|.+.|||.|||.+. .++.+...+++..+|.||++||... .|.|+|||||++||||++++.+.|+|+|+|.
T Consensus 288 TdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 288 TDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred eecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 9999999999999874 5999999999999999999999753 4889999999999999999999999999998
Q ss_pred cccccc---cccccCccccccccccccccCCCC------CchhHHHHHHHHHHHHHhC----------CCCCCCCcccCC
Q 001562 925 LLEVSE---THATTDVAGTFGYVAPEYATTCRV------SDKADVYSFGVVLLELISG----------KRSLDPSFSEYG 985 (1052)
Q Consensus 925 ~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~------~~~sDv~slG~il~elltg----------~~p~~~~~~~~~ 985 (1052)
...... .-.....+||.+|||||++..... -..+||||||.++||+..+ +.||++--+.
T Consensus 365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~-- 442 (513)
T KOG2052|consen 365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPS-- 442 (513)
T ss_pred EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCC--
Confidence 765432 123345789999999999976321 2368999999999999874 3666644333
Q ss_pred CCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 986 NGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
+.+..++.+-+..+ +.... .|..|. +..+...+.++|++||..+|..|.|+-.+.+.|.++
T Consensus 443 -DPs~eeMrkVVCv~-~~RP~-ipnrW~--s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l 503 (513)
T KOG2052|consen 443 -DPSFEEMRKVVCVQ-KLRPN-IPNRWK--SDPALRVMAKLMKECWYANPAARLTALRIKKTLAKL 503 (513)
T ss_pred -CCCHHHHhcceeec-ccCCC-CCcccc--cCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHH
Confidence 22233333322222 22211 223333 346678899999999999999999998888887765
No 28
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=357.22 Aligned_cols=378 Identities=22% Similarity=0.207 Sum_probs=281.2
Q ss_pred cccccchhhhCCCCCCeeEecCCCceecCCCCccCCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCcc
Q 001562 111 ISGTLSASIAKLTELRTLSVPHNSFSGEIPAGVGELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRG 190 (1052)
Q Consensus 111 l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 190 (1052)
+.|.+|+ +-+.||+++|.++..-+..|.++++|++++|..|.++ .||...+...+|+.|+|.+|.|+..-.+.
T Consensus 72 l~g~lp~------~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~ 144 (873)
T KOG4194|consen 72 LKGFLPS------QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEE 144 (873)
T ss_pred cCCcCcc------ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHH
Confidence 4555553 4567999999999888889999999999999999999 89988888888999999999999777888
Q ss_pred ccCCCCCcEEEccCCcccCccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCC
Q 001562 191 LIGNGELSVIDMSSNRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISEL 270 (1052)
Q Consensus 191 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 270 (1052)
+..++.|+.||||.|.|+. ++...|..-.++++|+|++|+|+..--..|.++.+|..|.|+.|+++...+..|.++++|
T Consensus 145 L~~l~alrslDLSrN~is~-i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L 223 (873)
T KOG4194|consen 145 LSALPALRSLDLSRNLISE-IPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKL 223 (873)
T ss_pred HHhHhhhhhhhhhhchhhc-ccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchh
Confidence 8889999999999999986 777777777789999999999998777888899999999999999987777788889999
Q ss_pred CEEEccCCCCCCCCCcccccCCCCCeeecccCcccccCCCCCCccccccCCCchhhhcccCCcEeecCCCCCcccCCccc
Q 001562 271 KVLDVSRNSLTDRIPVELADCSKLSVLVLTNIDASLDLDNSRGEFSAFDGGVPYELLLSRSLEVLWAPRANLGGRLPDNW 350 (1052)
Q Consensus 271 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~l~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~ 350 (1052)
+.|+|..|+|.-.--..|..|.+|+.|.|.. |++...-...|
T Consensus 224 ~~LdLnrN~irive~ltFqgL~Sl~nlklqr--------------------------------------N~I~kL~DG~F 265 (873)
T KOG4194|consen 224 ESLDLNRNRIRIVEGLTFQGLPSLQNLKLQR--------------------------------------NDISKLDDGAF 265 (873)
T ss_pred hhhhccccceeeehhhhhcCchhhhhhhhhh--------------------------------------cCcccccCcce
Confidence 9999999998743344555555555555443 44444445567
Q ss_pred cCCCCccEEeCCCCcccccCCccccccCCCCEEeCCCCcCccCCCCCCCCCccceEecccCccccCCCCCccccccccCC
Q 001562 351 SESCSLKVLNLGQNSLKGAVPKSLGMCRNLTYLDLSLNNLEGYLPMQLPVPCMVYFNVSQNNITGVLPRFENVSCDNHFG 430 (1052)
Q Consensus 351 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~ 430 (1052)
..+.++++|+|+.|+++..--.++-++++|+.||||+|.|...-+..+
T Consensus 266 y~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~W-------------------------------- 313 (873)
T KOG4194|consen 266 YGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSW-------------------------------- 313 (873)
T ss_pred eeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchh--------------------------------
Confidence 777777777777777776666677777777777777777664333222
Q ss_pred ccccccccccccCcccccceeeeeeccCCccccccCcccccccccccccchhHHhhccCCcccCCCCCccccccCCCcce
Q 001562 431 FQDLQYANVPVMGSISDENFVIIHDFSGNKFLGSLPLFAIGDGFLAAKYKPHYRLLLNNNMFNGSVPGERISKCNDLQSF 510 (1052)
Q Consensus 431 ~~~l~~~~~~~~~~~~~~~~l~~l~ls~n~~~g~~p~~~~~~~~~~~~~~~~~~l~l~~n~~~~~~p~~~~~~~~~l~~~ 510 (1052)
T Consensus 314 -------------------------------------------------------------------------------- 313 (873)
T KOG4194|consen 314 -------------------------------------------------------------------------------- 313 (873)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCcccccccchHHHHhcCCCceEEEccCcccccccccccCCCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCC
Q 001562 511 SVNLSANLLSGMSYEAFLLDCVQLVEFEAANNQISGSIAAGVGKLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGN 590 (1052)
Q Consensus 511 ~l~l~~n~l~~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 590 (1052)
..+.+|++|+|++|+|+...+..|..+..|++|.|+.|+|+......|.++++|+.|||++|
T Consensus 314 ------------------sftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N 375 (873)
T KOG4194|consen 314 ------------------SFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSN 375 (873)
T ss_pred ------------------hhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCC
Confidence 12345666666666666666666666666677777777766666666667777777777777
Q ss_pred ccCCcCc---hhhcCCcCCcEEEcCCCCCCCCCcchhcccccccceeccCCcCCCCCCcccccccccCeEecccCcCC
Q 001562 591 NLTGEIP---SQFGHLISLVVLDLSHNALTGSIPASLTKATKLESLFLAHNRLSGEIPVSFSTLVNLSALDLSFNNLS 665 (1052)
Q Consensus 591 ~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 665 (1052)
.|+..+. ..|.+|++|+.|+|.+|+|..+...+|.++.+|++|||.+|.|..+.|.+|..+ .|+.|-+..-.+-
T Consensus 376 ~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssfl 452 (873)
T KOG4194|consen 376 ELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFL 452 (873)
T ss_pred eEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceE
Confidence 6664443 346667777777777777774444667777777777777777777777777777 7777766554443
No 29
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-38 Score=339.66 Aligned_cols=259 Identities=27% Similarity=0.375 Sum_probs=208.7
Q ss_pred CCCcccceeeecCceEEEEE-EecCCeEEEEEEeccCchh--hHHHHHHHHHHhccCCcCceeeEEEEEecC--CeEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIRHKNLVTLIGYYVGE--AEMFLV 849 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 849 (1052)
+.|+..++||+|.||.||+| +..+|+.||+|++.....+ ......+|+.+|+++.||||+++.+...+. ..+|+|
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 35778899999999999999 5567999999999776533 345567899999999999999999998876 689999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
+|||+ -+|.-++... +-.+++.++..+++|+++|++|+|.+ ||+|||||..|||+|.+|.+||+|||+|+.+...
T Consensus 197 FeYMd-hDL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 197 FEYMD-HDLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred Eeccc-chhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 99995 4888888764 36799999999999999999999999 9999999999999999999999999999988877
Q ss_pred ccccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHh-CCccccc
Q 001562 930 ETHATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKE-GRSSELF 1007 (1052)
Q Consensus 930 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1007 (1052)
.....+..+.|..|.|||.+.|. .|+.+.|+||.|||+.||++|++.|.+..+ ++-...+++. |...+.+
T Consensus 272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE--------veQl~kIfklcGSP~e~~ 343 (560)
T KOG0600|consen 272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE--------VEQLHKIFKLCGSPTEDY 343 (560)
T ss_pred CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH--------HHHHHHHHHHhCCCChhc
Confidence 76667788899999999999874 589999999999999999999998874321 1112222221 2222222
Q ss_pred cc--hhh--------cCCC-------HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1008 LP--ELW--------EAGP-------QENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1008 ~~--~l~--------~~~~-------~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+ ++. ..+. ...+....+|+..+++.||++|.||.++++
T Consensus 344 W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 344 WPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 22 110 0011 112335789999999999999999999875
No 30
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-39 Score=347.34 Aligned_cols=242 Identities=29% Similarity=0.440 Sum_probs=204.3
Q ss_pred CcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCC
Q 001562 777 FSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGG 856 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 856 (1052)
..-.+.||.|+.|.||+|++. ++.||||+++. .-+.+++-|++++||||+.|.|+|.....+|+|||||..|
T Consensus 126 IsELeWlGSGaQGAVF~Grl~-netVAVKKV~e-------lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G 197 (904)
T KOG4721|consen 126 ISELEWLGSGAQGAVFLGRLH-NETVAVKKVRE-------LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG 197 (904)
T ss_pred hhhhhhhccCcccceeeeecc-CceehhHHHhh-------hhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence 334578999999999999987 78899998752 2356899999999999999999999999999999999999
Q ss_pred CHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccC
Q 001562 857 NLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTD 936 (1052)
Q Consensus 857 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 936 (1052)
-|+..|+.. ..++....+.|.++||.||.|||.. .|||||+|+-||||+.+..|||+|||.++..... ...-.
T Consensus 198 qL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMS 270 (904)
T KOG4721|consen 198 QLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMS 270 (904)
T ss_pred cHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhh
Confidence 999999875 5789999999999999999999999 9999999999999999999999999999876532 23345
Q ss_pred ccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCC
Q 001562 937 VAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGP 1016 (1052)
Q Consensus 937 ~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1016 (1052)
+.||..|||||+++....+.|+|||||||++|||+||..||..-... .+.-|-... .+.-..|
T Consensus 271 FaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss-------------AIIwGVGsN----sL~LpvP 333 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS-------------AIIWGVGSN----SLHLPVP 333 (904)
T ss_pred hhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh-------------eeEEeccCC----cccccCc
Confidence 78999999999999999999999999999999999999998732211 111111111 1122345
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 1017 QENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 1017 ~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
..++..+.-|++.||+-.|..||++++++..++-
T Consensus 334 stcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 334 STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 6677789999999999999999999999988763
No 31
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=344.36 Aligned_cols=263 Identities=25% Similarity=0.425 Sum_probs=226.3
Q ss_pred hhhHHHhhCCCcccceeeecCceEEEEEEecC-CeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCe
Q 001562 767 YDNVVRATGNFSIRNLIGTGGFGSTYKAELVP-GYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAE 845 (1052)
Q Consensus 767 ~~~~~~~~~~~~~~~~Lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 845 (1052)
+++++-...+..+..+||-|.||+||.|.|+. .-.||||.++... -..++|..|+.+|+.++|||+|+++|+|..+..
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 35566666678888999999999999998864 5679999987544 456899999999999999999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccc
Q 001562 846 MFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARL 925 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~ 925 (1052)
+|+|+|||..|+|.+||++.....++.-..+.+|.||..||+||..+ ++||||+.++|+||.++-.|||+|||+++.
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhh
Confidence 99999999999999999998777888888999999999999999999 999999999999999999999999999998
Q ss_pred ccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCcc
Q 001562 926 LEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSS 1004 (1052)
Q Consensus 926 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
+....+.......-++.|.|||.+....++.|+|||+|||++||+.| |..||. +.++.+... +...+.
T Consensus 415 MtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYP--------GidlSqVY~-LLEkgy-- 483 (1157)
T KOG4278|consen 415 MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYP--------GIDLSQVYG-LLEKGY-- 483 (1157)
T ss_pred hcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCC--------CccHHHHHH-HHhccc--
Confidence 87666656566667789999999999999999999999999999999 777775 233333332 222222
Q ss_pred ccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1005 ELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1005 ~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.-+.|..|+..+.+|++.||++.|.+||+++|+-+.|+.|
T Consensus 484 -------RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 484 -------RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred -------cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 2345677888899999999999999999999999998864
No 32
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=311.50 Aligned_cols=237 Identities=25% Similarity=0.400 Sum_probs=200.3
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||.|+||.|..++.+ +|..+|+|++...+. +..+...+|..+++.+.||+++++.+.+.+.+..|+||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46889999999999999999765 588999999976543 34566778999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||++||-|..++++. ++++++.+.-+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+|||+|+....
T Consensus 124 eyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~-- 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG-- 196 (355)
T ss_pred eccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC--
Confidence 999999999999886 5799999999999999999999999 999999999999999999999999999996642
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
.+...+|||.|+|||+++...+..++|-|||||++|||+.|.+||....+ ....+.+. +++..
T Consensus 197 --rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~iY~KI~-~~~v~------ 259 (355)
T KOG0616|consen 197 --RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQIYEKIL-EGKVK------ 259 (355)
T ss_pred --cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HHHHHHHH-hCccc------
Confidence 24456899999999999999999999999999999999999999985433 12222222 22111
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCC
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRP 1039 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RP 1039 (1052)
.|.-....+.+|++..++.|-.+|-
T Consensus 260 ----fP~~fs~~~kdLl~~LL~vD~t~R~ 284 (355)
T KOG0616|consen 260 ----FPSYFSSDAKDLLKKLLQVDLTKRF 284 (355)
T ss_pred ----CCcccCHHHHHHHHHHHhhhhHhhh
Confidence 1222233478899999999999883
No 33
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=5e-38 Score=338.86 Aligned_cols=246 Identities=28% Similarity=0.472 Sum_probs=210.3
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+.. .++.+.+.+|++++++++||||+.++++|+...++++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57888899999999999999654 57899999886543 3446678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|+.| +|..++... ..++++.+..++.+++.|+.|||+. +|+|||+||+||+++..+.+|+||||+|+.+.. ..
T Consensus 82 ~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST-NT 154 (808)
T ss_pred hhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc-Cc
Confidence 9965 999999875 5799999999999999999999999 999999999999999999999999999997764 33
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
.......|||-|||||...+..|+..+|+||+||++||+++|++||.. .++.+.++.+..+ +.
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a--------~si~~Lv~~I~~d--------~v- 217 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA--------RSITQLVKSILKD--------PV- 217 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH--------HHHHHHHHHHhcC--------CC-
Confidence 445567899999999999999999999999999999999999999972 3344444444332 11
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..|......+..++...+..||.+|.+-.+++.
T Consensus 218 --~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 218 --KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred --CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 123456667999999999999999999877653
No 34
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.7e-37 Score=350.27 Aligned_cols=259 Identities=24% Similarity=0.370 Sum_probs=204.6
Q ss_pred hhCCCcccceeeecCceEEEEEEe------cCCeEEEEEEeccCch-hhHHHHHHHHHHhccC-CcCceeeEEEEEecC-
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL------VPGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGE- 843 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~- 843 (1052)
..++|++.++||+|+||.||+|.. .+++.||||++..... .....+.+|+.+++++ +||||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 456799999999999999999964 2356899999865432 3346788999999999 899999999988764
Q ss_pred CeEEEEEeecCCCCHHHHHhhcc---------------------------------------------------------
Q 001562 844 AEMFLVYNFLSGGNLETFIHKKS--------------------------------------------------------- 866 (1052)
Q Consensus 844 ~~~~lv~e~~~~gsL~~~l~~~~--------------------------------------------------------- 866 (1052)
..+++||||+++|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 46899999999999999997532
Q ss_pred ---CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc-cccCcccccc
Q 001562 867 ---GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH-ATTDVAGTFG 942 (1052)
Q Consensus 867 ---~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~g~~~ 942 (1052)
...+++.++..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||+++........ ......+++.
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 12477888999999999999999999 9999999999999999999999999999865432221 2223346678
Q ss_pred ccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHH
Q 001562 943 YVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLL 1021 (1052)
Q Consensus 943 y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 1021 (1052)
|+|||++.+..++.++|||||||++|||++ |..||...... .. .......+.... .+...+.
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-------~~-~~~~~~~~~~~~---------~~~~~~~ 304 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-------EE-FCQRLKDGTRMR---------APENATP 304 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-------HH-HHHHHhcCCCCC---------CCCCCCH
Confidence 999999999999999999999999999997 99998642211 11 112222221111 1223344
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1022 GMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1022 ~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+.+++.+||+.||++|||+.|+++.|+++
T Consensus 305 ~l~~li~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 305 EIYRIMLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 688999999999999999999999999875
No 35
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.3e-41 Score=349.81 Aligned_cols=443 Identities=29% Similarity=0.378 Sum_probs=332.9
Q ss_pred ccchhhhCCCCCCeeEecCCCceecCCCCccCCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCccccC
Q 001562 114 TLSASIAKLTELRTLSVPHNSFSGEIPAGVGELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIG 193 (1052)
Q Consensus 114 ~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 193 (1052)
.+|++++++..++.|+.++|+++ ++|+.++.+.+|..|+.++|.+. ++|+.++.+..|..|+..+|+++ ..|.+++.
T Consensus 82 ~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~ 158 (565)
T KOG0472|consen 82 QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVN 158 (565)
T ss_pred hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHH
Confidence 57899999999999999999999 99999999999999999999999 88999999999999999999999 89999999
Q ss_pred CCCCcEEEccCCcccCccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEE
Q 001562 194 NGELSVIDMSSNRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVL 273 (1052)
Q Consensus 194 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 273 (1052)
+.+|..+++.+|++.. .|+..+. ++.|++||...|.++ .+|..++++.+|..|+|..|+|. ..| +|.+++.|..|
T Consensus 159 ~~~l~~l~~~~n~l~~-l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~El 233 (565)
T KOG0472|consen 159 LSKLSKLDLEGNKLKA-LPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKEL 233 (565)
T ss_pred HHHHHHhhccccchhh-CCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHH
Confidence 9999999999999986 5555555 999999999999997 68999999999999999999998 677 89999999999
Q ss_pred EccCCCCCCCCCcccc-cCCCCCeeecccCcccccCCCCCCccccccCCCchhhhcccCCcEeecCCCCCcccCCccccC
Q 001562 274 DVSRNSLTDRIPVELA-DCSKLSVLVLTNIDASLDLDNSRGEFSAFDGGVPYELLLSRSLEVLWAPRANLGGRLPDNWSE 352 (1052)
Q Consensus 274 ~L~~N~l~~~~p~~l~-~l~~L~~L~L~~n~~~~~l~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~ 352 (1052)
+++.|++. .+|.+.+ ++.++.+|+|.+|++. .+|.++..+++|++|++++|.+++ +|..+++
T Consensus 234 h~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk---------------e~Pde~clLrsL~rLDlSNN~is~-Lp~sLgn 296 (565)
T KOG0472|consen 234 HVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK---------------EVPDEICLLRSLERLDLSNNDISS-LPYSLGN 296 (565)
T ss_pred HhcccHHH-hhHHHHhcccccceeeeccccccc---------------cCchHHHHhhhhhhhcccCCcccc-CCccccc
Confidence 99999998 5777765 8999999999887765 456666666666666666666654 3445666
Q ss_pred CCCccEEeCCCCcccccCCcccccc------CCCCE----EeCCCCc---------CccCCCCCCCCCccceEecccCcc
Q 001562 353 SCSLKVLNLGQNSLKGAVPKSLGMC------RNLTY----LDLSLNN---------LEGYLPMQLPVPCMVYFNVSQNNI 413 (1052)
Q Consensus 353 ~~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~----L~Ls~N~---------l~~~~p~~~~~~~L~~L~ls~N~l 413 (1052)
+ .|+.|-+.+|.+.. +-..+-+. +.|+. =-++.-. ..+..|......+.+.|+++.-++
T Consensus 297 l-hL~~L~leGNPlrT-iRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~ql 374 (565)
T KOG0472|consen 297 L-HLKFLALEGNPLRT-IRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQL 374 (565)
T ss_pred c-eeeehhhcCCchHH-HHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhccccccc
Confidence 6 66666666666542 21111110 11111 0001000 000011111123445555555555
Q ss_pred ccCCCCCccccccccCCccccccccccccCcccccceeeeeeccCCccccccCcccccccccccccchh-HHhhccCCcc
Q 001562 414 TGVLPRFENVSCDNHFGFQDLQYANVPVMGSISDENFVIIHDFSGNKFLGSLPLFAIGDGFLAAKYKPH-YRLLLNNNMF 492 (1052)
Q Consensus 414 ~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~ls~n~~~g~~p~~~~~~~~~~~~~~~~-~~l~l~~n~~ 492 (1052)
+.++.+ +........+...+++.|++. .+|.-.. ..+.+ ..++
T Consensus 375 t~VPdE----------------------Vfea~~~~~Vt~VnfskNqL~-elPk~L~-------~lkelvT~l~------ 418 (565)
T KOG0472|consen 375 TLVPDE----------------------VFEAAKSEIVTSVNFSKNQLC-ELPKRLV-------ELKELVTDLV------ 418 (565)
T ss_pred ccCCHH----------------------HHHHhhhcceEEEecccchHh-hhhhhhH-------HHHHHHHHHH------
Confidence 444322 122233344667788888875 2331100 01111 1233
Q ss_pred cCCCCCccccccCCCcceEEecCcccccccchHHHHhcCCCceEEEccCcccccccccccCCCCCCCEEEccCCcCCCCC
Q 001562 493 NGSVPGERISKCNDLQSFSVNLSANLLSGMSYEAFLLDCVQLVEFEAANNQISGSIAAGVGKLMKLQRLDLRGNRVSGSL 572 (1052)
Q Consensus 493 ~~~~p~~~~~~~~~l~~~~l~l~~n~l~~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 572 (1052)
+++|.++-++ .+.+.+++|+.|+|++|-+. .+|..++.+..|+.|+++.|++. .+
T Consensus 419 ---------------------lsnn~isfv~--~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~l 473 (565)
T KOG0472|consen 419 ---------------------LSNNKISFVP--LELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-ML 473 (565)
T ss_pred ---------------------hhcCccccch--HHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cc
Confidence 3334333333 23467889999999999988 78888999999999999999998 89
Q ss_pred chhhcCcccCcEEEcCCCccCCcCchhhcCCcCCcEEEcCCCCCCCCCcchhcccccccceeccCCcCCCCCCc
Q 001562 573 PDELGKLKFLKWILLGGNNLTGEIPSQFGHLISLVVLDLSHNALTGSIPASLTKATKLESLFLAHNRLSGEIPV 646 (1052)
Q Consensus 573 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 646 (1052)
|..+..+..|+.+-.++|++....|..+.+|.+|.+|||.+|.|. .+|+.+++|++|++|+|++|+|+ .++.
T Consensus 474 P~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr-~Pr~ 545 (565)
T KOG0472|consen 474 PECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR-QPRH 545 (565)
T ss_pred hHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC-CCHH
Confidence 999999999999999999999666777999999999999999999 89999999999999999999998 4443
No 36
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-37 Score=341.09 Aligned_cols=249 Identities=31% Similarity=0.464 Sum_probs=207.4
Q ss_pred HhhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccC----ch-hhHHHHHHHHHHhccCC-cCceeeEEEEEecCC
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIG----RF-QGIQQFDAEIGTLGRIR-HKNLVTLIGYYVGEA 844 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 844 (1052)
...+.|++.+.||+|.||.|+.|.. .+++.||+|++... .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3456899999999999999999954 56899999976553 11 23456778999999998 999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC-CcEEEEecccc
Q 001562 845 EMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE-LNAYLSDFGLA 923 (1052)
Q Consensus 845 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~-~~~kl~Dfgla 923 (1052)
..|+||||+.+|+|.+++... .++.+.++.+++.|++.|++|+|++ ||+||||||+||+++.+ +.+||+|||++
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred eEEEEEEecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 999999999999999999883 5789999999999999999999999 99999999999999999 99999999999
Q ss_pred ccccccccccccCccccccccccccccCCC-CC-chhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhC
Q 001562 924 RLLEVSETHATTDVAGTFGYVAPEYATTCR-VS-DKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEG 1001 (1052)
Q Consensus 924 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~-~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1052)
.... ..........|++.|+|||++.+.. |+ .++||||+||++|.|++|+.||+.. +.....+. +..+
T Consensus 169 ~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~--------~~~~l~~k-i~~~ 238 (370)
T KOG0583|consen 169 AISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS--------NVPNLYRK-IRKG 238 (370)
T ss_pred cccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc--------cHHHHHHH-HhcC
Confidence 8764 3334455678999999999999977 75 7899999999999999999999852 22222222 2222
Q ss_pred CccccccchhhcCCCHHH-HHHHHHHHHHcccCCCCCCCCHHHHH
Q 001562 1002 RSSELFLPELWEAGPQEN-LLGMMRLASTCTVETLSTRPSVKQVL 1045 (1052)
Q Consensus 1002 ~~~~~~~~~l~~~~~~~~-~~~l~~Li~~cl~~dP~~RPs~~eil 1045 (1052)
... .|... ..++..++++|+..||.+|+++.|++
T Consensus 239 ~~~----------~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 239 EFK----------IPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred Ccc----------CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 211 11111 44588999999999999999999998
No 37
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-36 Score=334.48 Aligned_cols=246 Identities=22% Similarity=0.325 Sum_probs=201.9
Q ss_pred ceeeecCceEEEEEEecCCeEEEEEEeccCchhh---HHHHHHHHHHhccCCcCceeeEEEEEec----CCeEEEEEeec
Q 001562 781 NLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQG---IQQFDAEIGTLGRIRHKNLVTLIGYYVG----EAEMFLVYNFL 853 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 853 (1052)
..||+|++|.||+|.+ +|+.||||+++...... .+.+.+|++++++++||||+++++++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5799999999999988 58999999987654332 4678899999999999999999999876 35689999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++|+|.+++... ..+++....+++.+++.|+.|||+.. +++||||||+||++++++.+||+|||+++......
T Consensus 105 ~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~--- 177 (283)
T PHA02988 105 TRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP--- 177 (283)
T ss_pred CCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc---
Confidence 999999999765 46889999999999999999999742 78899999999999999999999999998653221
Q ss_pred ccCccccccccccccccC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 934 TTDVAGTFGYVAPEYATT--CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~--~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.... ..++...+...+...
T Consensus 178 -~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~--------~~~~~~~i~~~~~~~------- 241 (283)
T PHA02988 178 -FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT--------TKEIYDLIINKNNSL------- 241 (283)
T ss_pred -ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhcCCCC-------
Confidence 23457889999999976 678999999999999999999999997421 223333333222211
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQLK 1052 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ik 1052 (1052)
..+...+..+.+++.+||+.||++|||++|+++.|++++
T Consensus 242 --~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 242 --KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred --CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 112234556999999999999999999999999999864
No 38
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=7.5e-37 Score=331.52 Aligned_cols=252 Identities=23% Similarity=0.348 Sum_probs=205.0
Q ss_pred hhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
..++|++.++||+|+||+||.|+- .+|+.+|+|++++... .+.+.+++|-.+|....+|.||+++-.|.+...+|+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 456899999999999999999954 4699999999977643 345677899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
||||++||++..+|.+. ..++++.+..++.+.+.|++.+|+. |+|||||||+|+|||..|++||+|||++.-+..
T Consensus 219 iMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhh
Confidence 99999999999999876 5899999999999999999999999 999999999999999999999999999964321
Q ss_pred ----------------------cccc------------------------cccCccccccccccccccCCCCCchhHHHH
Q 001562 929 ----------------------SETH------------------------ATTDVAGTFGYVAPEYATTCRVSDKADVYS 962 (1052)
Q Consensus 929 ----------------------~~~~------------------------~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s 962 (1052)
.+.. .....+|||.|||||++.+..|+..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0000 011347999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCC--
Q 001562 963 FGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPS-- 1040 (1052)
Q Consensus 963 lG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs-- 1040 (1052)
+|||+|||+.|.+||..+.+.. ....+..|...+.. ........+..++|.+|++ ||++|.-
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~-T~rkI~nwr~~l~f--------------P~~~~~s~eA~DLI~rll~-d~~~RLG~~ 437 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQE-TYRKIVNWRETLKF--------------PEEVDLSDEAKDLITRLLC-DPENRLGSK 437 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhhhccC--------------CCcCcccHHHHHHHHHHhc-CHHHhcCcc
Confidence 9999999999999998654431 11222222221111 1112223568899999999 9999985
Q ss_pred -HHHHH
Q 001562 1041 -VKQVL 1045 (1052)
Q Consensus 1041 -~~eil 1045 (1052)
+.||.
T Consensus 438 G~~EIK 443 (550)
T KOG0605|consen 438 GAEEIK 443 (550)
T ss_pred cHHHHh
Confidence 55543
No 39
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=336.54 Aligned_cols=260 Identities=27% Similarity=0.405 Sum_probs=218.9
Q ss_pred hHHHhhCCCcccceeeecCceEEEEEEecC---C--eEEEEEEeccC-chhhHHHHHHHHHHhccCCcCceeeEEEEEec
Q 001562 769 NVVRATGNFSIRNLIGTGGFGSTYKAELVP---G--YLVAVKKLSIG-RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVG 842 (1052)
Q Consensus 769 ~~~~~~~~~~~~~~Lg~G~~g~V~~~~~~~---~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 842 (1052)
+++...+.....+.||+|.||.||+|...+ | -.||||.-+.. ..+..+.|..|..+|+.++||||++++|+|.+
T Consensus 383 nyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 383 NYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred cceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 344455566778899999999999995432 3 45888987763 44557889999999999999999999999975
Q ss_pred CCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccc
Q 001562 843 EAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGL 922 (1052)
Q Consensus 843 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgl 922 (1052)
...++|||.++-|-|..|++... ..++......++.||..|++|||+. ++|||||.++||||.+...||++|||+
T Consensus 463 -~P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGL 537 (974)
T KOG4257|consen 463 -QPMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGL 537 (974)
T ss_pred -cceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccch
Confidence 67899999999999999999876 6799999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhC
Q 001562 923 ARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEG 1001 (1052)
Q Consensus 923 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1052)
++.+....++......-+..|||||.+.-++++.+||||.|||.+||++. |..||.+-...+.. ..+..|
T Consensus 538 SR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI---------~~iEnG 608 (974)
T KOG4257|consen 538 SRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI---------GHIENG 608 (974)
T ss_pred hhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE---------EEecCC
Confidence 99998777777776667789999999999999999999999999999987 99999753322110 011111
Q ss_pred CccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1002 RSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1002 ~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
. .-..|+.|+..+..|+.+||.+||.+||++.|+...|+++
T Consensus 609 e---------RlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv 649 (974)
T KOG4257|consen 609 E---------RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV 649 (974)
T ss_pred C---------CCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence 1 1245777888899999999999999999999999988764
No 40
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-39 Score=345.49 Aligned_cols=372 Identities=24% Similarity=0.254 Sum_probs=305.4
Q ss_pred CccEEEccCccccccCCccccCcCcCCeEecccccccccCCccccCCCCCcEEEccCCcccCccccCCCcccCCCCEEEc
Q 001562 148 LLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGNGELSVIDMSSNRLSGGLAIDSSSECEFLTYLKL 227 (1052)
Q Consensus 148 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L 227 (1052)
.-+.||+|+|+++..-+..|.++++|+.+++.+|.++ .+|........|+.|+|.+|.|+. +....++.++.|+.|||
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~s-v~se~L~~l~alrslDL 156 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISS-VTSEELSALPALRSLDL 156 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeecccccc-ccHHHHHhHhhhhhhhh
Confidence 3567999999999888888999999999999999998 888877777778999999988875 66667777888888888
Q ss_pred cCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEEEccCCCCCCCCCcccccCCCCCeeecccCccccc
Q 001562 228 SDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVLDVSRNSLTDRIPVELADCSKLSVLVLTNIDASLD 307 (1052)
Q Consensus 228 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~ 307 (1052)
|.|.|+...-.+|..-.++++|+|++|.|+..-...|.++.+|.+|.|+.|+++...+..|.+|++|+.|+|..|.+.
T Consensus 157 SrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~ir-- 234 (873)
T KOG4194|consen 157 SRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIR-- 234 (873)
T ss_pred hhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhcccccee--
Confidence 888888766567777778888888888888777888888888888888888888766667777777777776654432
Q ss_pred CCCCCCccccccCCCchhhhcccCCcEeecCCCCCcccCCccccCCCCccEEeCCCCcccccCCccccccCCCCEEeCCC
Q 001562 308 LDNSRGEFSAFDGGVPYELLLSRSLEVLWAPRANLGGRLPDNWSESCSLKVLNLGQNSLKGAVPKSLGMCRNLTYLDLSL 387 (1052)
Q Consensus 308 l~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 387 (1052)
-.---.|.++.+|+.|.|..|.|...-...|..|.++++|+|+.
T Consensus 235 ------------------------------------ive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~ 278 (873)
T KOG4194|consen 235 ------------------------------------IVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLET 278 (873)
T ss_pred ------------------------------------eehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeeccc
Confidence 22223466777777788888887766677777777777777777
Q ss_pred CcCccCCCCCCCCCccceEecccCccccCCCCCccccccccCCccccccccccccCcccccceeeeeeccCCccccccCc
Q 001562 388 NNLEGYLPMQLPVPCMVYFNVSQNNITGVLPRFENVSCDNHFGFQDLQYANVPVMGSISDENFVIIHDFSGNKFLGSLPL 467 (1052)
Q Consensus 388 N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~ls~n~~~g~~p~ 467 (1052)
|+++..-.
T Consensus 279 N~l~~vn~------------------------------------------------------------------------ 286 (873)
T KOG4194|consen 279 NRLQAVNE------------------------------------------------------------------------ 286 (873)
T ss_pred chhhhhhc------------------------------------------------------------------------
Confidence 77663210
Q ss_pred ccccccccccccchhHHhhccCCcccCCCCCccccccCCCcceEEecCcccccccchHHHHhcCCCceEEEccCcccccc
Q 001562 468 FAIGDGFLAAKYKPHYRLLLNNNMFNGSVPGERISKCNDLQSFSVNLSANLLSGMSYEAFLLDCVQLVEFEAANNQISGS 547 (1052)
Q Consensus 468 ~~~~~~~~~~~~~~~~~l~l~~n~~~~~~p~~~~~~~~~l~~~~l~l~~n~l~~~~~~~~~~~~~~L~~L~l~~N~l~~~ 547 (1052)
.|..+++.|+.|++++|.|..+
T Consensus 287 ----------------------------------------------------------g~lfgLt~L~~L~lS~NaI~ri 308 (873)
T KOG4194|consen 287 ----------------------------------------------------------GWLFGLTSLEQLDLSYNAIQRI 308 (873)
T ss_pred ----------------------------------------------------------ccccccchhhhhccchhhhhee
Confidence 1123578899999999999999
Q ss_pred cccccCCCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCCccCCcCchhhcCCcCCcEEEcCCCCCCCCCc---chh
Q 001562 548 IAAGVGKLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGNNLTGEIPSQFGHLISLVVLDLSHNALTGSIP---ASL 624 (1052)
Q Consensus 548 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p---~~~ 624 (1052)
.++.+...++|++|+|++|+|+...+++|..|..|++|+|++|.++..-...|..+++|+.|||++|.|++.+- ..|
T Consensus 309 h~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f 388 (873)
T KOG4194|consen 309 HIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAF 388 (873)
T ss_pred ecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhh
Confidence 99999999999999999999999999999999999999999999997778899999999999999999987664 357
Q ss_pred cccccccceeccCCcCCCCCCcccccccccCeEecccCcCCCCCCc-cc--ccccccccCCccccCCC
Q 001562 625 TKATKLESLFLAHNRLSGEIPVSFSTLVNLSALDLSFNNLSGHIPH-LQ--HLDCIAFKGNKYLASCP 689 (1052)
Q Consensus 625 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~--~l~~~~~~~n~~~~~~~ 689 (1052)
..|++|+.|+|.+|+|..+...+|..++.|+.|||.+|.|...=|. +. .|..+.+..-.++|+|.
T Consensus 389 ~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCq 456 (873)
T KOG4194|consen 389 NGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQ 456 (873)
T ss_pred ccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEecc
Confidence 8899999999999999977778999999999999999999753332 11 77888888888999997
No 41
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-37 Score=339.72 Aligned_cols=247 Identities=26% Similarity=0.367 Sum_probs=209.2
Q ss_pred CCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
+-|++++.||+|+.|.|-.|++ .+|+.+|||++..... .....+++|+-+|+-+.||||+++++++++..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 5689999999999999999965 5799999999976521 22456789999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|-|.+|+-.+ +++++.++.+++.||+.|+.|+|.. +|+|||+||+|+|+|..+++||+|||+|..-. .
T Consensus 92 Eyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~--~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV--P 164 (786)
T ss_pred EecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc--C
Confidence 999999999999876 5799999999999999999999999 99999999999999999999999999998543 2
Q ss_pred cccccCccccccccccccccCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 931 THATTDVAGTFGYVAPEYATTCRV-SDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
...-...+|+|+|.|||++.|..| +.++||||+|||+|.++||+.||++ .+.......+.+ |..+
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD--------dNir~LLlKV~~-G~f~----- 230 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD--------DNIRVLLLKVQR-GVFE----- 230 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC--------ccHHHHHHHHHc-Cccc-----
Confidence 233445689999999999999988 4789999999999999999999983 233333333322 2221
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
.|...+.+.++|+.+|+..||++|.|++||.+.
T Consensus 231 -----MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 231 -----MPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred -----CCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 234445569999999999999999999999863
No 42
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-38 Score=332.15 Aligned_cols=249 Identities=27% Similarity=0.422 Sum_probs=208.9
Q ss_pred CCCcccceeeecCceEEEEE-EecCCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 775 GNFSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
..|+..+.||+|.||.||+| +..+++.||+|++..... .+.+++.+|+.++...+++||.++|+.+..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 45777799999999999999 455789999999976544 3467889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+.||++.+.++.. ..+++..+.-+.+++..|+.|||.+ +.+|||||+.||++..+|.+|++|||.+.........
T Consensus 93 ~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 93 CGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred hcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhc
Confidence 9999999999765 3458888889999999999999999 9999999999999999999999999999887654444
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
. ...+||+.|||||++....|+.|+||||+|++.+||.+|.+|+....+.. +...+.... -|.+.
T Consensus 168 r-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr---------vlflIpk~~-----PP~L~ 232 (467)
T KOG0201|consen 168 R-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR---------VLFLIPKSA-----PPRLD 232 (467)
T ss_pred c-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce---------EEEeccCCC-----CCccc
Confidence 3 77899999999999998899999999999999999999999997443310 001111111 11222
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
......+.+++..|+..+|+.||+|.++++.
T Consensus 233 ----~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 233 ----GDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ----cccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 2334459999999999999999999999863
No 43
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.5e-36 Score=328.84 Aligned_cols=256 Identities=24% Similarity=0.359 Sum_probs=207.0
Q ss_pred hCCCcccceeeecCceEEEEEEec----CCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV----PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
..+|++.+.||+|+||.||+|.+. .+..||+|.++.... ...+.+.+|++.+++++||||+++++++..++..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 346899999999999999999653 357899999876533 334678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
||||+++|+|.+++.... ..+++.++..++.|++.|++|||++ +++||||||+||+++.++.++++|||.+.....
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 999999999999998653 4689999999999999999999999 999999999999999999999999998765432
Q ss_pred cccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF 1007 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
..........++..|+|||.+.+..++.++|||||||++||+++ |+.||..... .+..+.. ..+...
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~--------~~~~~~~-~~~~~~--- 227 (266)
T cd05064 160 EAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG--------QDVIKAV-EDGFRL--- 227 (266)
T ss_pred cchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH--------HHHHHHH-HCCCCC---
Confidence 22122222345678999999999999999999999999999875 9999864321 1222222 222111
Q ss_pred cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1008 LPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1008 ~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+..++..+.+++.+||+.+|++||+++|+.+.|+++
T Consensus 228 ------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 ------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11233455689999999999999999999999999764
No 44
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.8e-37 Score=299.69 Aligned_cols=248 Identities=26% Similarity=0.400 Sum_probs=211.3
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
-++|++.+.||+|.||.||.|+.+ ++..||+|++.+.+. ....++.+|+++-..++||||++++++|.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 357999999999999999999654 578899999865542 2356889999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
+||.++|.+...|+.....++++.....+..|+|.|+.|+|.+ +|+||||||+|+|++.++..||+|||.+...+
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 9999999999999987778899999999999999999999999 99999999999999999999999999997543
Q ss_pred ccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 930 ETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 930 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
.......+||..|.+||...+..++...|+|++|++.||++.|.+||..... .+-.+.+.+ .+..
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--------~etYkrI~k----~~~~-- 240 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--------SETYKRIRK----VDLK-- 240 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh--------HHHHHHHHH----cccc--
Confidence 3445567899999999999999999999999999999999999999984321 111222211 1111
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.|........++|.+|+..+|.+|.+..|+++
T Consensus 241 -----~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 241 -----FPSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred -----CCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 23344556889999999999999999999875
No 45
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=307.96 Aligned_cols=259 Identities=25% Similarity=0.324 Sum_probs=208.4
Q ss_pred CCCcccceeeecCceEEEEEE-ecCCeEEEEEEeccCchhh--HHHHHHHHHHhccCCcCceeeEEEEEec--CCeEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAE-LVPGYLVAVKKLSIGRFQG--IQQFDAEIGTLGRIRHKNLVTLIGYYVG--EAEMFLV 849 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv 849 (1052)
+.|+...+|++|.||.||+|+ .++++.||+|+++...... .-...+|+.++.+.+|||||.+-.+... -+.+|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 468899999999999999995 4578999999998765432 2345789999999999999999998764 3579999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
||||+ -+|...++... +++...++.-+..|+++|++|||.. .|+|||+|++|+|+...|.+||+|||+|+.++..
T Consensus 156 Me~~E-hDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 156 MEYVE-HDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHH-hhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 99995 59999999886 7899999999999999999999999 9999999999999999999999999999988744
Q ss_pred ccccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 930 ETHATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 930 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
....+..+.|..|.|||.+.+. .|+.+.||||+|||+.||+++++.|.+..+ ..+..+....-|...+..+
T Consensus 231 -~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE-------~dQl~~If~llGtPte~iw 302 (419)
T KOG0663|consen 231 -LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE-------IDQLDKIFKLLGTPSEAIW 302 (419)
T ss_pred -cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch-------HHHHHHHHHHhCCCccccC
Confidence 3445566789999999998875 588999999999999999999988864322 2233333334455555444
Q ss_pred chhhc----------CCC--------HH--HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1009 PELWE----------AGP--------QE--NLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1009 ~~l~~----------~~~--------~~--~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
|.+.. ..| .. ....-.+++..++..||++|.||.|.++
T Consensus 303 pg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 303 PGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred CCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 43211 111 01 2245678999999999999999999875
No 46
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.8e-36 Score=327.83 Aligned_cols=250 Identities=33% Similarity=0.529 Sum_probs=198.8
Q ss_pred cccceeeecCceEEEEEEec-----CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 778 SIRNLIGTGGFGSTYKAELV-----PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 778 ~~~~~Lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
++.+.||.|.||.||+|.+. .+..|+||.++... .+..+.+.+|++.+++++||||++++|++...+..++|+|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 35688999999999999877 36789999996543 3346889999999999999999999999998888999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc-
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE- 930 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~- 930 (1052)
|+++|+|.++++......+++.++.+|+.||++|++|||++ +|+|+||+++||++++++.+||+|||++.......
T Consensus 82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 99999999999987557799999999999999999999999 99999999999999999999999999998763222
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
............|+|||.+.+..++.++||||||+++||+++ |+.||... ...++...+ ..+....
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--------~~~~~~~~~-~~~~~~~---- 225 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--------DNEEIIEKL-KQGQRLP---- 225 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--------CHHHHHHHH-HTTEETT----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccc-cccccce----
Confidence 223334457789999999999899999999999999999999 67777522 223333333 3222211
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKL 1048 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L 1048 (1052)
.+..++..+.+++.+||+.||++||++.++++.|
T Consensus 226 -----~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 -----IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -----SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -----eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1223345588999999999999999999999876
No 47
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.9e-36 Score=333.93 Aligned_cols=263 Identities=24% Similarity=0.400 Sum_probs=204.4
Q ss_pred hCCCcccceeeecCceEEEEEEecC-----------------CeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceee
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP-----------------GYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVT 835 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 835 (1052)
.++|++.+.||+|+||.||+|.+.+ +..||+|.+..... ....++.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578999999999999999996532 34799999876432 33567899999999999999999
Q ss_pred EEEEEecCCeEEEEEeecCCCCHHHHHhhcc-----------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 001562 836 LIGYYVGEAEMFLVYNFLSGGNLETFIHKKS-----------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIV 898 (1052)
Q Consensus 836 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ii 898 (1052)
+++++.+.+..++||||+++|+|.+++.... ...+++..+.+++.|++.|++|||+. +|+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence 9999999999999999999999999986532 12467888999999999999999999 999
Q ss_pred ecCCCCCCEEECCCCcEEEEecccccccccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhC--CC
Q 001562 899 HRDIKPSNILLDEELNAYLSDFGLARLLEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISG--KR 975 (1052)
Q Consensus 899 HrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg--~~ 975 (1052)
||||||+||++++++.+||+|||+++....... .......++..|+|||++.+..++.++||||||+++|||+++ ..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 999999999999999999999999986543322 122334567899999999988899999999999999999974 45
Q ss_pred CCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 976 SLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 976 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
||.... ................... ....++.++..+.+++.+||+.||++|||+.|+.+.|++
T Consensus 241 p~~~~~-----~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 241 PYGELT-----DEQVIENAGEFFRDQGRQV------YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCcCC-----HHHHHHHHHHHhhhccccc------cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 665321 1112222222222111110 111123345569999999999999999999999998864
No 48
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=8.4e-36 Score=324.00 Aligned_cols=252 Identities=21% Similarity=0.403 Sum_probs=205.8
Q ss_pred CCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecC
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
.+|++.+.||+|+||.||+|++.++..+|+|.+..... ..+++..|++++++++||||+++++++.+....++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM-SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc-cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 35888899999999999999988888899998764432 34678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT 934 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 934 (1052)
+|+|.++++... ..+++..+..++.|++.|++|||+. +|+||||+|+||++++++.+||+|||.+...........
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05114 83 NGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS 158 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCceecc
Confidence 999999997654 3588999999999999999999999 999999999999999999999999999986543332222
Q ss_pred cCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhc
Q 001562 935 TDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWE 1013 (1052)
Q Consensus 935 ~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1013 (1052)
....++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+..+........ ..
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~--------~~~~~~~i~~~~~~---~~----- 222 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS--------NYEVVEMISRGFRL---YR----- 222 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHHCCCCC---CC-----
Confidence 33345678999999998889999999999999999999 888886321 12222222221111 11
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 1014 AGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 1014 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
+...+..+.+++.+||+.+|++||+++|+++.|.
T Consensus 223 --~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 223 --PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred --CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1122346899999999999999999999999863
No 49
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=8.3e-36 Score=325.08 Aligned_cols=256 Identities=25% Similarity=0.424 Sum_probs=210.7
Q ss_pred hCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
.++|++.++||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+|++++++++.+....+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 457899999999999999999888888999998765433 3578899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++++|.++++......+++..+..++.|+++|++|||+. +++||||||+||++++++.++|+|||++..........
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 160 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence 999999999876666789999999999999999999999 99999999999999999999999999998765332222
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
.....++..|+|||.+.+..++.++|||||||++|||+| |+.||...... .... ....+....
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--------~~~~-~~~~~~~~~------- 224 (261)
T cd05072 161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--------DVMS-ALQRGYRMP------- 224 (261)
T ss_pred cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--------HHHH-HHHcCCCCC-------
Confidence 233345678999999998889999999999999999998 88888632111 1111 112221110
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.....+..+.+++.+|++.+|++||+++++.+.|+++
T Consensus 225 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 225 --RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred --CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 1112334588999999999999999999999999875
No 50
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1e-35 Score=328.49 Aligned_cols=251 Identities=25% Similarity=0.334 Sum_probs=202.1
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
.|+..+.||+|+||+||+|.. .+|+.||+|++..... .....+.+|++++++++|++++++++++.+++..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 377889999999999999965 4689999998864432 223467889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|+++|+|.+++.......+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 99999999988765545789999999999999999999999 99999999999999999999999999998653222
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
......|+..|+|||++.+..++.++||||+||++|||++|+.||...... ...+..........
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~~--------- 221 (285)
T cd05631 157 -TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER-----VKREEVDRRVKEDQ--------- 221 (285)
T ss_pred -eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc-----hhHHHHHHHhhccc---------
Confidence 223456899999999999999999999999999999999999999743221 01111111111110
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPS-----VKQVLI 1046 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs-----~~eil~ 1046 (1052)
...+......+.+++.+||+.||++||+ ++++++
T Consensus 222 -~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 222 -EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred -ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 0112223445889999999999999997 788775
No 51
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6.7e-36 Score=325.82 Aligned_cols=258 Identities=26% Similarity=0.445 Sum_probs=215.3
Q ss_pred HhhCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
+...+|++.++||.|+||.||+|...++..+|+|.+.........++.+|+++++.++|+|++++++++.+....++|||
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 34557999999999999999999888899999999987766566789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|+++++|.+++....+..+++.++..++.|++.|++|||+. +|+||||+|+||++++++.+||+|||.+.......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~- 158 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV- 158 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcc-
Confidence 99999999999876667789999999999999999999999 99999999999999999999999999998664322
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
.......++..|+|||.+.+..++.++||||||+++|+|++ |+.||.... ..+..+... .+...
T Consensus 159 ~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--------~~~~~~~~~-~~~~~------ 223 (261)
T cd05148 159 YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN--------NHEVYDQIT-AGYRM------ 223 (261)
T ss_pred ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC--------HHHHHHHHH-hCCcC------
Confidence 22223446678999999998889999999999999999998 888886432 112222222 11111
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+..++..+.+++.+||+.||++|||++++++.|+.+
T Consensus 224 ---~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 224 ---PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 11233445689999999999999999999999999864
No 52
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=6.3e-36 Score=325.99 Aligned_cols=257 Identities=25% Similarity=0.409 Sum_probs=210.8
Q ss_pred hhCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
..++|++.+.||+|+||.||+|...+++.||+|.++.... ..+++.+|++++++++|||++++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 3457899999999999999999877788899999875443 346789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++....+..+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||++.........
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence 9999999999876556789999999999999999999999 9999999999999999999999999999876533222
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
.......+..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+... ....+...
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~-~~~~~~~~------- 223 (261)
T cd05068 160 AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--------AEVLQ-QVDQGYRM------- 223 (261)
T ss_pred ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHH-HHHcCCCC-------
Confidence 2222233468999999999899999999999999999999 8888863211 11111 11111110
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+...+..+.+++.+|++.+|++||++.++++.|+.+
T Consensus 224 --~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 224 --PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred --CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 11223345689999999999999999999999999864
No 53
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.9e-36 Score=343.82 Aligned_cols=262 Identities=23% Similarity=0.371 Sum_probs=206.4
Q ss_pred HHHhhCCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCc-hhhHHHHHHHHHHhccC-CcCceeeEEEEEe
Q 001562 770 VVRATGNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYV 841 (1052)
Q Consensus 770 ~~~~~~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 841 (1052)
+....++|++.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+++++.+ +|+||+++++++.
T Consensus 33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 3445567999999999999999998642 23579999987543 33356788999999999 8999999999999
Q ss_pred cCCeEEEEEeecCCCCHHHHHhhcc-------------------------------------------------------
Q 001562 842 GEAEMFLVYNFLSGGNLETFIHKKS------------------------------------------------------- 866 (1052)
Q Consensus 842 ~~~~~~lv~e~~~~gsL~~~l~~~~------------------------------------------------------- 866 (1052)
+.+..++||||+++|+|.++++...
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 9999999999999999999986431
Q ss_pred -------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc-c
Q 001562 867 -------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET-H 932 (1052)
Q Consensus 867 -------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~-~ 932 (1052)
...+++.++.+++.|+++|++|||++ +|+||||||+||++++++.+||+|||+++....... .
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~ 269 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV 269 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee
Confidence 12478889999999999999999999 999999999999999999999999999976543221 1
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
......++..|+|||++.+..++.++|||||||++|||++ |+.||...... .. .......+...
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~-------~~-~~~~~~~~~~~------- 334 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN-------SK-FYKMVKRGYQM------- 334 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc-------HH-HHHHHHcccCc-------
Confidence 1222345678999999998899999999999999999997 99998642211 01 11111211111
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+...+..+.+++.+||+.||++||++.++++.|+++
T Consensus 335 --~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 335 --SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred --cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 01112234589999999999999999999999999875
No 54
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-37 Score=299.42 Aligned_cols=266 Identities=24% Similarity=0.378 Sum_probs=212.7
Q ss_pred HHHhhCCCcccceeeecCceEEEEEE-ecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEec-----C
Q 001562 770 VVRATGNFSIRNLIGTGGFGSTYKAE-LVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVG-----E 843 (1052)
Q Consensus 770 ~~~~~~~~~~~~~Lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~ 843 (1052)
+....++|++.+.+|+|||+.||.++ ..+++.+|+|++.....++.+..++|++..++++||||++++++... .
T Consensus 16 v~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 16 VIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred EEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence 34456789999999999999999995 45688999999988877788899999999999999999999988653 3
Q ss_pred CeEEEEEeecCCCCHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecc
Q 001562 844 AEMFLVYNFLSGGNLETFIHKKS--GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFG 921 (1052)
Q Consensus 844 ~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfg 921 (1052)
.+.|++++|...|+|.+.++... +..+++.++++|+.+|++|+++||+. .+.++||||||.||++.+.+.+++.|||
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEecc
Confidence 45899999999999999998654 45799999999999999999999998 2349999999999999999999999999
Q ss_pred ccccccccccc--------cccCcccccccccccccc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcch
Q 001562 922 LARLLEVSETH--------ATTDVAGTFGYVAPEYAT---TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNI 990 (1052)
Q Consensus 922 la~~~~~~~~~--------~~~~~~g~~~y~aPE~~~---~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~ 990 (1052)
.+....-.-.. .......|..|.|||.+. +...+.++|||||||++|+|+.|..||+......+. +
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgS---l 251 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGS---L 251 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCe---E
Confidence 99866422111 112235788999999886 455678999999999999999999999865442111 1
Q ss_pred HHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 991 VSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.- ......+.-......++.+.+++++|++.||.+||++.+++..++.+
T Consensus 252 aL------------Av~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 252 AL------------AVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred EE------------eeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 10 00111111111122566799999999999999999999999998765
No 55
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=302.17 Aligned_cols=252 Identities=25% Similarity=0.367 Sum_probs=207.6
Q ss_pred hhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
.++.|++.+.||+|.|+.||++.+ .+|+.+|+|++.... ..+.+++.+|+.+-+.++||||+++.+.+.+.+..|+|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 346789999999999999999944 468899999875432 33567889999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECC---CCcEEEEeccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDE---ELNAYLSDFGLARLL 926 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~---~~~~kl~Dfgla~~~ 926 (1052)
+|+|.|++|..-+-.+ ...++..+...+.||++++.|+|.+ +|||||+||+|+++.+ ...+|++|||+|...
T Consensus 89 Fe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred EecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 9999999998766544 3578888999999999999999999 9999999999999954 345899999999987
Q ss_pred cccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 927 EVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 927 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
+ ........+|||+|||||++...+|+..+|||+.||++|-++.|++||.++... ...+ .+..+.. .
T Consensus 164 ~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~--------rlye-~I~~g~y--d 230 (355)
T KOG0033|consen 164 N--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYE-QIKAGAY--D 230 (355)
T ss_pred C--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH--------HHHH-HHhcccc--C
Confidence 6 445566789999999999999999999999999999999999999999853222 1122 2222322 2
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+++..|+...+ +..+|+++|+..||++|.|+.|.++
T Consensus 231 ~~~~~w~~is~----~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 231 YPSPEWDTVTP----EAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred CCCcccCcCCH----HHHHHHHHHhccChhhhccHHHHhC
Confidence 34444544444 4889999999999999999999874
No 56
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1e-35 Score=340.80 Aligned_cols=259 Identities=24% Similarity=0.385 Sum_probs=205.1
Q ss_pred hhCCCcccceeeecCceEEEEEEe------cCCeEEEEEEeccCc-hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCC
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL------VPGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEA 844 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 844 (1052)
..++|++.+.||+|+||.||+|.+ .++..||||+++... ....+.+.+|+++++.+ +||||+++++++.+.+
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 345799999999999999999964 235689999986443 23456788999999999 8999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhcc----------------------------------------------------------
Q 001562 845 EMFLVYNFLSGGNLETFIHKKS---------------------------------------------------------- 866 (1052)
Q Consensus 845 ~~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 866 (1052)
..++||||+++|+|.++++...
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 9999999999999999997532
Q ss_pred ---------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 867 ---------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 867 ---------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
...++++.+.+++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 12478889999999999999999999 999999999999999999999999999986643222
Q ss_pred c-cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 932 H-ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 932 ~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
. ......++..|+|||.+.+..++.++|||||||++|||++ |..||...... ....+ ....+....
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-------~~~~~-~~~~~~~~~---- 337 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-------SKFYK-MIKEGYRML---- 337 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-------HHHHH-HHHhCccCC----
Confidence 1 1222345678999999999999999999999999999998 78887632111 11112 222221110
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+...+.++.+++.+||+.||++||+++|+++.|++.
T Consensus 338 -----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 338 -----SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -----CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 1112234689999999999999999999999999864
No 57
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.5e-35 Score=323.38 Aligned_cols=255 Identities=25% Similarity=0.429 Sum_probs=208.5
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
.+|++.+.||+|+||.||+|... .++.||+|++.... ....++.+|++++++++|+|++++++++..+...++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 45888899999999999999654 58889999886543 34567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++++|.+++.......+++..+..++.|+++|++|||+. +++||||||+||++++++.+||+|||++..........
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~ 161 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 161 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence 999999999876556789999999999999999999999 99999999999999999999999999998664332222
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
.....++..|+|||.+.+..++.++||||||+++|||++ |..||... ...+..+.. ..+.. +
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~--------~~~~~~~~~-~~~~~-----~--- 224 (263)
T cd05052 162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQVYELL-EKGYR-----M--- 224 (263)
T ss_pred cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--------CHHHHHHHH-HCCCC-----C---
Confidence 222334568999999999999999999999999999998 88887632 112222222 11111 1
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+...+..+.+++.+||+.+|++||++.+++++|+.+
T Consensus 225 -~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 -ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11223345699999999999999999999999999875
No 58
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-36 Score=314.25 Aligned_cols=247 Identities=23% Similarity=0.395 Sum_probs=209.7
Q ss_pred hCCCcccceeeecCceEEEEE-EecCCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
..+|++.+.||+|.||.|-+| ++..|+.||||.++.... ++.-.+.+|+++|..++||||+.++.+|+..+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 357899999999999999999 557899999998866543 4455678999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
|||..+|.|+||+... +.+++.++..++.||+.|+.|+|.. +++|||+|.+|||+|+++++||+|||++-.+.
T Consensus 132 MEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~-- 204 (668)
T KOG0611|consen 132 MEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA-- 204 (668)
T ss_pred EEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc--
Confidence 9999999999999887 5799999999999999999999999 99999999999999999999999999998765
Q ss_pred ccccccCccccccccccccccCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 930 ETHATTDVAGTFGYVAPEYATTCRVS-DKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 930 ~~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
+....+.++|++-|.+||++.|..|. +..|.||+||++|-+..|.-||++. +....++++.......
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~--------Dhk~lvrQIs~GaYrE---- 272 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR--------DHKRLVRQISRGAYRE---- 272 (668)
T ss_pred cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc--------hHHHHHHHhhcccccC----
Confidence 33445667899999999999999884 7899999999999999999999843 3334444443322211
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
++.+....-||++|+..+|++|.|+.+|...
T Consensus 273 --------P~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 273 --------PETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred --------CCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 1112235669999999999999999998753
No 59
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-35 Score=338.94 Aligned_cols=261 Identities=23% Similarity=0.239 Sum_probs=199.4
Q ss_pred hCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
..+|++.+.||+|+||.||+|.. .+++.||+|+.. ...+.+|++++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 35799999999999999999954 568899999643 23567899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+ .++|..++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+|+........
T Consensus 165 ~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~ 238 (391)
T PHA03212 165 Y-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN 238 (391)
T ss_pred C-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence 9 57899988765 4688999999999999999999999 9999999999999999999999999999754322222
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc-----
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF----- 1007 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 1007 (1052)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.......................+.....+
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 333457999999999999999999999999999999999999887643221111111111111111111100000
Q ss_pred ---cc----------hhhcCC-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1008 ---LP----------ELWEAG-----PQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1008 ---~~----------~l~~~~-----~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+. ...... ....+.++.+++.+|++.||++|||++|+++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 000000 0123557889999999999999999999985
No 60
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.1e-36 Score=330.46 Aligned_cols=251 Identities=25% Similarity=0.420 Sum_probs=216.4
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh--hHHHHHHHHHHhccCCcCceeeEEEEEecCCe-EEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAE-MFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 850 (1052)
++|...+++|+|+||.++.++++ ++..+++|++...+.. ..+....|+.++++++|||||.+.+.|.+++. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 57889999999999999999665 4778999998765432 34467889999999999999999999999988 99999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
+|++||++.+.+.+..+..++++.+.+|+.|++.|+.|||++ +|+|||||+.||+++.++.+||+|||+|+..++..
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 999999999999998888899999999999999999999998 99999999999999999999999999999887544
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
.....++||+.||+||.+.+.+|..|+||||+||++|||++-+++|... +....+..+.+..
T Consensus 161 -~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~--------~m~~Li~ki~~~~--------- 222 (426)
T KOG0589|consen 161 -SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS--------NMSELILKINRGL--------- 222 (426)
T ss_pred -hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc--------chHHHHHHHhhcc---------
Confidence 3455678999999999999999999999999999999999999999843 2333333333322
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
....|..+..++..+|+.|+..+|+.||++.+++..
T Consensus 223 -~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 -YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 223355566679999999999999999999999864
No 61
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=339.00 Aligned_cols=253 Identities=24% Similarity=0.399 Sum_probs=212.6
Q ss_pred CCcccceeeecCceEEEEEEecC-----CeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELVP-----GYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
..+..++||.|+||+||+|.|-. +.+||+|++..... +...++.+|+..|.+++|||+++++|+|..+. ..+|
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 35567899999999999996643 35789998865433 34678999999999999999999999998765 8899
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
++||+.|+|.+|++.++ ..+..+..+.|..|||+||.|||++ +++||||.++||||++-..+||+|||+|+...+.
T Consensus 776 tq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 99999999999999876 6788999999999999999999999 9999999999999999999999999999988654
Q ss_pred cc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc
Q 001562 930 ET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF 1007 (1052)
Q Consensus 930 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
+. +......-++.|||-|.+....|++++|||||||++||++| |..|++.. ...+ +....+.+...
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi--------~~~e-I~dlle~geRL--- 919 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGI--------PAEE-IPDLLEKGERL--- 919 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCC--------CHHH-hhHHHhccccC---
Confidence 43 33334455679999999999999999999999999999999 88888732 2223 33344443322
Q ss_pred cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1008 LPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1008 ~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..|+-+..++.-++.+||..|++.||+++++..++.++
T Consensus 920 ------sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ 957 (1177)
T KOG1025|consen 920 ------SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRM 957 (1177)
T ss_pred ------CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHH
Confidence 34677788899999999999999999999999988764
No 62
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.1e-35 Score=329.35 Aligned_cols=244 Identities=25% Similarity=0.329 Sum_probs=201.5
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36889999999999999999665 68999999986533 233456888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 999999999999765 4689999999999999999999999 9999999999999999999999999999865321
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
.....|++.|+|||++.+..++.++||||+||++|||++|+.||.... ..+..+.... +..
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~--------~~~~~~~i~~-~~~------- 215 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN--------PFGIYEKILA-GKL------- 215 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHh-CCc-------
Confidence 223468999999999999889999999999999999999999997432 1222222222 111
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPS-----VKQVLI 1046 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs-----~~eil~ 1046 (1052)
..+......+.+++++|++.||.+||+ ++|+++
T Consensus 216 ---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 216 ---EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred ---CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 011222345889999999999999995 887764
No 63
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-36 Score=319.33 Aligned_cols=254 Identities=25% Similarity=0.368 Sum_probs=199.5
Q ss_pred HHhhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchh--------------hHHHHHHHHHHhccCCcCceee
Q 001562 771 VRATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQ--------------GIQQFDAEIGTLGRIRHKNLVT 835 (1052)
Q Consensus 771 ~~~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~l~h~niv~ 835 (1052)
.+.-++|++.+.||+|.||.|-+|.. .+++.||+|++.+.... ..+...+|+.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 34456899999999999999999954 46899999998543211 1467889999999999999999
Q ss_pred EEEEEec--CCeEEEEEeecCCCCHHHHHhhccCCC-ccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC
Q 001562 836 LIGYYVG--EAEMFLVYNFLSGGNLETFIHKKSGKK-IQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE 912 (1052)
Q Consensus 836 l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~ 912 (1052)
++++..+ .+.+|+|+|||..|.+.. ....+. +++.++++++.+++.||+|||.+ |||||||||.|+|++++
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w---~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKW---CPPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSD 246 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCcccc---CCCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCC
Confidence 9999875 467999999998877643 233344 89999999999999999999999 99999999999999999
Q ss_pred CcEEEEeccccccccccc----cccccCccccccccccccccCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCcccC
Q 001562 913 LNAYLSDFGLARLLEVSE----THATTDVAGTFGYVAPEYATTCR----VSDKADVYSFGVVLLELISGKRSLDPSFSEY 984 (1052)
Q Consensus 913 ~~~kl~Dfgla~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~----~~~~sDv~slG~il~elltg~~p~~~~~~~~ 984 (1052)
|++||+|||.+..+..+. .......+|||.|+|||...++. .+.+.||||+||++|-|+.|+.||..++..
T Consensus 247 g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~- 325 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL- 325 (576)
T ss_pred CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH-
Confidence 999999999998773321 11223368999999999987733 246789999999999999999999754321
Q ss_pred CCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 985 GNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
+....+.. ..+.....+++.+.+.+||+++++.||++|.+..+|...
T Consensus 326 -------~l~~KIvn---------~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 326 -------ELFDKIVN---------DPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred -------HHHHHHhc---------CcccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 11111111 111112223556779999999999999999999988643
No 64
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-36 Score=343.67 Aligned_cols=259 Identities=26% Similarity=0.377 Sum_probs=212.4
Q ss_pred HHhhCCCcccceeeecCceEEEEEEecCC-eEEEEEEeccCchhhHHHHHHHHHHhccCC-cCceeeEEEE-Eec-----
Q 001562 771 VRATGNFSIRNLIGTGGFGSTYKAELVPG-YLVAVKKLSIGRFQGIQQFDAEIGTLGRIR-HKNLVTLIGY-YVG----- 842 (1052)
Q Consensus 771 ~~~~~~~~~~~~Lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~----- 842 (1052)
.+...++++.++|.+|||+.||.|....+ ..||+|++...+....+...+|+++|++++ |+|||.+++. ...
T Consensus 33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 34556788999999999999999976655 999999998888888899999999999996 9999999993 221
Q ss_pred -CCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecc
Q 001562 843 -EAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFG 921 (1052)
Q Consensus 843 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfg 921 (1052)
..++++.||||+||.|-|++..+-...+++.++++|+.++++|+++||.. .+.|||||||.+|||+..++..||||||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 24689999999999999999977667799999999999999999999987 5679999999999999999999999999
Q ss_pred ccccccccccc--------cccCcccccccccccccc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcch
Q 001562 922 LARLLEVSETH--------ATTDVAGTFGYVAPEYAT---TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNI 990 (1052)
Q Consensus 922 la~~~~~~~~~--------~~~~~~g~~~y~aPE~~~---~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~ 990 (1052)
.|.-.-..... ..-....|+.|+|||.+. +...++|+|||++||+||-++....||+.....
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l------- 264 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL------- 264 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce-------
Confidence 98744222111 011235789999999874 667899999999999999999999999853211
Q ss_pred HHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 991 VSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+..+.+. -...+.+...+.+||+.||+++|++||++.+++..+.+|
T Consensus 265 ------aIlng~Y~--------~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l 311 (738)
T KOG1989|consen 265 ------AILNGNYS--------FPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL 311 (738)
T ss_pred ------eEEecccc--------CCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence 01111111 112246677899999999999999999999999988765
No 65
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.1e-35 Score=325.46 Aligned_cols=266 Identities=23% Similarity=0.284 Sum_probs=201.6
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36899999999999999999775 578999999865432 234677889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|++++.+..+.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 81 YVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 9988776655432 24689999999999999999999999 999999999999999999999999999987643333
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcch--------HHHHHHHHHhCCc
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNI--------VSWAKLLIKEGRS 1003 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 1003 (1052)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||........ .... .++.+........
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ-LFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhCCCCHHHHHhhhccchh
Confidence 333445689999999999998899999999999999999999999974321100 0000 0000000000000
Q ss_pred cccccchhh------cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1004 SELFLPELW------EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1004 ~~~~~~~l~------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.....+... .......+..+.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000 0011123456899999999999999999999875
No 66
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-36 Score=332.18 Aligned_cols=243 Identities=24% Similarity=0.361 Sum_probs=204.1
Q ss_pred hhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 847 (1052)
.-++|.+.++||+|.||+|++|+.+ +++.+|||++++.. .++.+..+.|.+++... +||.++.++.+|...+++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 3457999999999999999999776 47899999998763 34567778888888877 5999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+||||+.||++..+.+. +.+++..+.-+|..|+.||.|||++ |||+||+|.+|||+|.+|.+||+|||+++.--
T Consensus 446 fvmey~~Ggdm~~~~~~---~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIHT---DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEEecCCCcEEEEEec---ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccC
Confidence 99999999994444433 5699999999999999999999999 99999999999999999999999999998432
Q ss_pred ccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc
Q 001562 928 VSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF 1007 (1052)
Q Consensus 928 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
.....+....|||.|||||++.+..|+.+.|.|||||++|||+.|..||.++.++ +....+..+.
T Consensus 520 -~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe--------e~FdsI~~d~------ 584 (694)
T KOG0694|consen 520 -GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE--------EVFDSIVNDE------ 584 (694)
T ss_pred -CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHhcCC------
Confidence 2334567789999999999999999999999999999999999999999865433 2222222111
Q ss_pred cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 001562 1008 LPELWEAGPQENLLGMMRLASTCTVETLSTRPSV 1041 (1052)
Q Consensus 1008 ~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~ 1041 (1052)
..+|.....+...|+++++..+|++|.-+
T Consensus 585 -----~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 585 -----VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -----CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 12455666779999999999999999865
No 67
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.1e-35 Score=326.04 Aligned_cols=256 Identities=27% Similarity=0.436 Sum_probs=208.0
Q ss_pred CCCcccceeeecCceEEEEEEecC------CeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELVP------GYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 847 (1052)
++|++.+.||+|+||.||+|.... ...||+|.+..... ....++.+|++++++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 468899999999999999996543 25799998865432 33467899999999999999999999999989999
Q ss_pred EEEeecCCCCHHHHHhhccC--------------CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC
Q 001562 848 LVYNFLSGGNLETFIHKKSG--------------KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL 913 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~ 913 (1052)
++|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 99999999999999976421 4578899999999999999999999 999999999999999999
Q ss_pred cEEEEecccccccccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchH
Q 001562 914 NAYLSDFGLARLLEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIV 991 (1052)
Q Consensus 914 ~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~ 991 (1052)
.++|+|||++........ .......+++.|+|||.+.+..++.++|||||||++|||++ |..||..... .
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~--------~ 233 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN--------Q 233 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH--------H
Confidence 999999999986543322 22333456788999999998899999999999999999998 9999874321 1
Q ss_pred HHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 992 SWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
+..+ .+..+... ..+...+.++.+++.+||+.||++||++.|+++.|+.+
T Consensus 234 ~~~~-~i~~~~~~---------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 234 EVIE-MIRSRQLL---------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHH-HHHcCCcC---------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 2222 22222111 12334456699999999999999999999999999864
No 68
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.7e-35 Score=318.00 Aligned_cols=252 Identities=25% Similarity=0.413 Sum_probs=205.3
Q ss_pred CCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecC
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
++|++.+.||+|+||.||+|++.++..+|+|.+..... ..+++.+|++++++++||||+++++++.+....++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 45888899999999999999887777899998875433 34678999999999999999999999998889999999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT 934 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 934 (1052)
+++|.+++.... ..+++..+.+++.|++.|++|||+. +++|+||||+||++++++.+||+|||.++..........
T Consensus 83 ~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05113 83 NGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS 158 (256)
T ss_pred CCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence 999999997654 3689999999999999999999999 999999999999999999999999999886543332222
Q ss_pred cCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhc
Q 001562 935 TDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWE 1013 (1052)
Q Consensus 935 ~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1013 (1052)
....++..|+|||.+.+..++.++||||||+++|||++ |+.||...... +...... .+...
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~-~~~~~--------- 220 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--------ETVEKVS-QGLRL--------- 220 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHh-cCCCC---------
Confidence 22345678999999998889999999999999999999 88888632211 1122221 11111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 1014 AGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 1014 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
..+...+..+.+++.+||+.+|++||++.++++.++
T Consensus 221 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 011122456899999999999999999999998874
No 69
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.5e-35 Score=318.40 Aligned_cols=255 Identities=27% Similarity=0.443 Sum_probs=208.0
Q ss_pred hCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
.++|++.+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|++++++++++. ....+++|||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 457899999999999999999888888899999876443 3467899999999999999999999885 45689999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++++|.++++......++++++..++.|++.|++|||+. +|+||||+|+||++++++.++|+|||.+..........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccccc
Confidence 999999999876556789999999999999999999999 99999999999999999999999999998664333222
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
.....++..|+|||.+.+..++.++||||||+++|||++ |..||.... ..+..... ..+...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--------~~~~~~~~-~~~~~~-------- 222 (260)
T cd05070 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN--------NREVLEQV-ERGYRM-------- 222 (260)
T ss_pred ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHH-HcCCCC--------
Confidence 223345678999999998889999999999999999999 888886321 11222222 111111
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+...+..+.+++.+|++.+|++|||++++.+.|+++
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 260 (260)
T cd05070 223 -PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLEDY 260 (260)
T ss_pred -CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 11223345699999999999999999999999999864
No 70
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.6e-35 Score=327.74 Aligned_cols=199 Identities=28% Similarity=0.458 Sum_probs=175.6
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
.++|++.+.||+|+||.||+|... ++..||+|.+..... ...+++.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 467999999999999999999665 588899998875432 335678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|+++++|.+++... ..+++..+..++.|++.|+.|||++. +|+||||||+||+++.++.++|+|||++......
T Consensus 84 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 84 HMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 99999999999765 46889999999999999999999862 6999999999999999999999999998755322
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDP 979 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~ 979 (1052)
......|++.|+|||.+.+..++.++||||+||++|||++|+.||..
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 22345689999999999999999999999999999999999999964
No 71
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.9e-35 Score=332.24 Aligned_cols=241 Identities=22% Similarity=0.287 Sum_probs=196.7
Q ss_pred ceeeecCceEEEEEEe-cCCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCC
Q 001562 781 NLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGG 856 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 856 (1052)
+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|++++++++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999965 468999999986532 233456788999999999999999999999999999999999999
Q ss_pred CHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccC
Q 001562 857 NLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTD 936 (1052)
Q Consensus 857 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 936 (1052)
+|.+++... ..+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++..... ......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~~~ 154 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GATMKT 154 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCcccc
Confidence 999999765 4689999999999999999999999 9999999999999999999999999998753211 122334
Q ss_pred ccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCC
Q 001562 937 VAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGP 1016 (1052)
Q Consensus 937 ~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1016 (1052)
..|++.|+|||++.+..++.++||||+||++|||++|+.||..... ....... ..+.. . .+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--------~~~~~~~-~~~~~------~----~p 215 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELI-LMEEI------R----FP 215 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH--------HHHHHHH-HcCCC------C----CC
Confidence 5689999999999999999999999999999999999999974211 1111211 11111 1 12
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001562 1017 QENLLGMMRLASTCTVETLSTRP-----SVKQVLI 1046 (1052)
Q Consensus 1017 ~~~~~~l~~Li~~cl~~dP~~RP-----s~~eil~ 1046 (1052)
......+.+++.+|++.||++|| ++.++++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 23344588999999999999999 7888864
No 72
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.9e-35 Score=334.12 Aligned_cols=253 Identities=21% Similarity=0.307 Sum_probs=204.4
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||.||+|... +++.||+|++.... ......+..|+++++.++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36899999999999999999765 58899999986542 223456788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 999999999999765 4688999999999999999999999 999999999999999999999999999985542
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
......|++.|+|||++.+..++.++||||+||++|||++|+.||..... .+........... +...
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~~~---~~~~ 220 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP--------NETWENLKYWKET---LQRP 220 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH--------HHHHHHHHhcccc---ccCC
Confidence 23345689999999999999999999999999999999999999974321 1111111111110 0000
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
............+.+++.+|+..+|++||+++|+++.
T Consensus 221 ~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 221 VYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0000001234568899999999999999999999863
No 73
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=7.9e-35 Score=317.36 Aligned_cols=255 Identities=28% Similarity=0.438 Sum_probs=207.1
Q ss_pred hCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
.++|++.++||+|+||.||+|...++..||+|++..... ..+++.+|++++++++|||++++++++. ....++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence 457999999999999999999877777899999875433 3467899999999999999999999875 45689999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++|+|.+++.......++++.+..++.|+++|++|+|+. +|+||||||+||++++++.++|+|||.+..........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence 999999999876555689999999999999999999999 99999999999999999999999999998665433322
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
.....++..|+|||...+..++.++||||+|+++|||+| |..||..... .+.... ...+...
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~--------~~~~~~-~~~~~~~-------- 222 (262)
T cd05071 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQ-VERGYRM-------- 222 (262)
T ss_pred ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh--------HHHHHH-HhcCCCC--------
Confidence 233456678999999998899999999999999999999 7777753211 111111 1111100
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+...+..+.+++.+|++.+|++||++.++++.|++.
T Consensus 223 -~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 223 -PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 11234456689999999999999999999999999863
No 74
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=7.9e-35 Score=333.91 Aligned_cols=262 Identities=22% Similarity=0.329 Sum_probs=207.9
Q ss_pred HHHhhCCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCch-hhHHHHHHHHHHhccCC-cCceeeEEEEEe
Q 001562 770 VVRATGNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIR-HKNLVTLIGYYV 841 (1052)
Q Consensus 770 ~~~~~~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 841 (1052)
.....++|++.++||+|+||.||+|... .+..||||++..... ...+.+.+|+++++++. ||||+++++++.
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~ 111 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT 111 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence 3445678999999999999999999653 235799999865433 33567899999999996 999999999999
Q ss_pred cCCeEEEEEeecCCCCHHHHHhhcc-------------------------------------------------------
Q 001562 842 GEAEMFLVYNFLSGGNLETFIHKKS------------------------------------------------------- 866 (1052)
Q Consensus 842 ~~~~~~lv~e~~~~gsL~~~l~~~~------------------------------------------------------- 866 (1052)
+....|+||||+++|+|.++++...
T Consensus 112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (400)
T cd05105 112 KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM 191 (400)
T ss_pred cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence 9999999999999999999986531
Q ss_pred ---------------------------------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 001562 867 ---------------------------------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNI 907 (1052)
Q Consensus 867 ---------------------------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Ni 907 (1052)
...+++..+.+++.|+++|++|||+. +|+||||||+||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Ni 268 (400)
T cd05105 192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNV 268 (400)
T ss_pred hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhE
Confidence 12477888899999999999999999 999999999999
Q ss_pred EECCCCcEEEEecccccccccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCC
Q 001562 908 LLDEELNAYLSDFGLARLLEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYG 985 (1052)
Q Consensus 908 ll~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~ 985 (1052)
++++++.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||......
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~-- 346 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD-- 346 (400)
T ss_pred EEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh--
Confidence 999999999999999986543222 12223456788999999999899999999999999999997 88888632111
Q ss_pred CCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 986 NGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.........+... ..+...+..+.+++.+||+.||++||++.++.+.|+++
T Consensus 347 ------~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 347 ------STFYNKIKSGYRM---------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred ------HHHHHHHhcCCCC---------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 1111122222111 11223445689999999999999999999999999875
No 75
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=329.86 Aligned_cols=252 Identities=24% Similarity=0.379 Sum_probs=210.6
Q ss_pred hCCCcccceeeecCceEEEEEEecC--C--eEEEEEEeccCchh-hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP--G--YLVAVKKLSIGRFQ-GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
.++..+.+.||+|.||+|++|.|.. | -.||||.++..... ...+|.+|+.+|.+++|||++++||++.+ ....+
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mM 187 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMM 187 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhH
Confidence 3456677899999999999998753 3 46899999766544 57899999999999999999999999987 78899
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
|||.++.|+|.+.|++.....+-......++.|||.||.||.++ ++||||+.++|+++.....|||+|||+.+-++.
T Consensus 188 V~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 188 VFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred HhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 99999999999999986567788899999999999999999999 999999999999999999999999999998875
Q ss_pred ccccc--ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 929 SETHA--TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 929 ~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
.+.+. .....-++.|+|||.+....++.++|||+|||++|||+| |..||-+. .-.++.+.+. ++.
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~--------~g~qIL~~iD-~~e--- 332 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC--------RGIQILKNID-AGE--- 332 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC--------CHHHHHHhcc-ccc---
Confidence 54332 233456679999999999999999999999999999999 66777632 2223333322 111
Q ss_pred cccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1006 LFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1006 ~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
.-..|..+++++.+++++||...|++|||+.++.+.
T Consensus 333 ------rLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 333 ------RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred ------cCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 113366788889999999999999999999999744
No 76
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.1e-34 Score=317.38 Aligned_cols=259 Identities=25% Similarity=0.375 Sum_probs=210.2
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccC---chhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIG---RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||.||+|... +++.||||.+... ......++.+|+++++.++|||++++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 47899999999999999999654 6899999987543 2333567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 851 NFLSGGNLETFIHKKS--GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
||+++++|.+++.... ...+++..+..++.|+++|++|||++ +|+||||+|+||+++.++.++|+|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999999886432 24578899999999999999999999 999999999999999999999999999886643
Q ss_pred cccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.. .......+++.|+|||.+.+..++.++||||+|+++|||++|+.||..... ...++.......+ ...
T Consensus 159 ~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~------~~~~~~~~~~~~~-~~~--- 227 (267)
T cd08228 159 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLFSLCQKIEQCD-YPP--- 227 (267)
T ss_pred hh-HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc------cHHHHHHHHhcCC-CCC---
Confidence 22 122234678899999999988899999999999999999999999864321 1222232222111 111
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQLK 1052 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ik 1052 (1052)
..+...+..+.+++.+||+.+|++||++.++++.++++|
T Consensus 228 -----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 228 -----LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred -----CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 011233456899999999999999999999999999886
No 77
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=6.4e-35 Score=317.87 Aligned_cols=256 Identities=25% Similarity=0.428 Sum_probs=209.7
Q ss_pred hhCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
..++|++.++||+|+||.||+|...+++.||+|.+..... ..+++.+|++++++++|+|++++++++. +...+++|||
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 3467999999999999999999888889999999875443 3468899999999999999999999874 4678999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++....+..+++.++..++.|++.|++|||+. +++||||||+||++++++.++|+|||.+.........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence 9999999999876666789999999999999999999998 9999999999999999999999999999866533322
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
......++..|+|||.+.+..++.++||||||+++||+++ |+.||..... .+..+.. ..+...
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~-~~~~~~------- 222 (260)
T cd05067 159 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN--------PEVIQNL-ERGYRM------- 222 (260)
T ss_pred cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh--------HHHHHHH-HcCCCC-------
Confidence 2333446678999999998889999999999999999999 9999863221 1222222 111111
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+...+..+.+++.+|++.+|++||+++++++.|+.+
T Consensus 223 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 223 --PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred --CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 11122344699999999999999999999999999864
No 78
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=332.52 Aligned_cols=244 Identities=25% Similarity=0.363 Sum_probs=201.0
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46899999999999999999765 58899999986532 233467889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|+|.+++... ..++++.+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 98 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~- 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR- 171 (329)
T ss_pred cCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence 999999999999765 4688999999999999999999999 9999999999999999999999999999865422
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
.....|++.|+|||++.+..++.++||||+||++|||++|+.||..... .+..+.+ ..+...
T Consensus 172 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--------~~~~~~i-~~~~~~------ 233 (329)
T PTZ00263 172 ---TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--------FRIYEKI-LAGRLK------ 233 (329)
T ss_pred ---cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--------HHHHHHH-hcCCcC------
Confidence 1234689999999999999999999999999999999999999964221 1222222 222111
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPS-----VKQVLI 1046 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs-----~~eil~ 1046 (1052)
.+......+.+++.+||+.||++||+ ++|+++
T Consensus 234 ----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 234 ----FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ----CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 11112345889999999999999996 677663
No 79
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=8.4e-35 Score=321.75 Aligned_cols=258 Identities=23% Similarity=0.356 Sum_probs=199.0
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
++|++.++||+|+||.||+|... +++.||+|+++.... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46999999999999999999654 688999999865432 2345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
++ ++|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||+++...... .
T Consensus 85 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-~ 158 (288)
T cd07871 85 LD-SDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-K 158 (288)
T ss_pred CC-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC-c
Confidence 96 59999987653 4578999999999999999999999 99999999999999999999999999997553222 2
Q ss_pred cccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH-hCCcccc----
Q 001562 933 ATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIK-EGRSSEL---- 1006 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---- 1006 (1052)
......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||...... +....... .+.....
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK--------EELHLIFRLLGTPTEETWPG 230 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhCCCChHHhhc
Confidence 2233467899999999875 56789999999999999999999999643211 11111111 0000000
Q ss_pred ------ccchhhcC--------CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1007 ------FLPELWEA--------GPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1007 ------~~~~l~~~--------~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+....... .......+..+++.+|++.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 231 ITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred cccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 01122345789999999999999999999975
No 80
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=308.13 Aligned_cols=260 Identities=24% Similarity=0.359 Sum_probs=200.9
Q ss_pred hCCCcccceeeecCceEEEEEE-ecCCeEEEEEEec--cCchhhHHHHHHHHHHhccCCcCceeeEEEEEec-----CCe
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAE-LVPGYLVAVKKLS--IGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVG-----EAE 845 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~-~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~ 845 (1052)
...|...+.||+|+||.|+.|. ..+|+.||+|++. -......++..+|+.+++.++|+||+.+.+++.. -..
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 3456667899999999999994 4578999999986 3344456778899999999999999999999875 357
Q ss_pred EEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccc
Q 001562 846 MFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARL 925 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~ 925 (1052)
+|+|+|+| +.+|...++.. +.++.+.+..+..|+++|+.|+|+. +|+|||+||.|++++.+..+||+|||+|+.
T Consensus 101 vYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~ 174 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARY 174 (359)
T ss_pred eEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceee
Confidence 89999999 77999999865 4599999999999999999999999 999999999999999999999999999998
Q ss_pred cccc-ccccccCcccccccccccccc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCc
Q 001562 926 LEVS-ETHATTDVAGTFGYVAPEYAT-TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRS 1003 (1052)
Q Consensus 926 ~~~~-~~~~~~~~~g~~~y~aPE~~~-~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
.... .....+..+.|..|.|||++. ...|+.+.||||.|||+.||++|++-|.+...- .+.......-|..
T Consensus 175 ~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v-------~Ql~lI~~~lGtP 247 (359)
T KOG0660|consen 175 LDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV-------HQLQLILELLGTP 247 (359)
T ss_pred ccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH-------HHHHHHHHhcCCC
Confidence 7532 223346678899999999875 467899999999999999999999988643211 1111111111111
Q ss_pred cccccchh-------------------hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1004 SELFLPEL-------------------WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1004 ~~~~~~~l-------------------~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+.....+ +...-+.......+|+.+|+..||.+|+|++|+++
T Consensus 248 ~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 248 SEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred CHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11000000 00000223345789999999999999999999875
No 81
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-34 Score=342.05 Aligned_cols=250 Identities=23% Similarity=0.303 Sum_probs=204.7
Q ss_pred CCcccceeeecCceEEEEEEec-C-CeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-P-GYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
.|.+.+.||+|+||.||+|... + ++.||+|.+..........+.+|+++++.++||||+++++++..++..|+||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4899999999999999999543 3 6788999876655555667888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 854 SGGNLETFIHKK--SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 854 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
++|+|.++++.. ....+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988653 234688999999999999999999999 999999999999999999999999999987643222
Q ss_pred -ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 932 -HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 932 -~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+........ ...
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~--------~~~~~~~~~~~-~~~------ 289 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS--------QREIMQQVLYG-KYD------ 289 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhC-CCC------
Confidence 22334568999999999999999999999999999999999999996321 12222222221 111
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+......+.+++.+||+.||++||+++++++
T Consensus 290 ---~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 ---PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ---CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 112223445899999999999999999999874
No 82
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.6e-34 Score=314.79 Aligned_cols=255 Identities=27% Similarity=0.436 Sum_probs=206.6
Q ss_pred hCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
.++|++.+.||+|+||.||+|....+..+|+|++.... ...+.+.+|++++++++|+|++++++++. ....++||||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 35689999999999999999988777789999876543 23467889999999999999999999885 45688999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++++|.++++......+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++|+|||.+..........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05069 83 GKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcccc
Confidence 999999999876556689999999999999999999999 99999999999999999999999999998664332222
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
.....++..|+|||...+..++.++||||+|+++|||++ |+.||..... .+.... ...+...
T Consensus 160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~-~~~~~~~-------- 222 (260)
T cd05069 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN--------REVLEQ-VERGYRM-------- 222 (260)
T ss_pred cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHH-HHcCCCC--------
Confidence 223346678999999998899999999999999999999 8888863221 111111 1111111
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+...+..+.+++.+||+.+|++||+++++++.|+++
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 260 (260)
T cd05069 223 -PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLEDY 260 (260)
T ss_pred -CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 11223455699999999999999999999999999863
No 83
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=4.5e-35 Score=324.61 Aligned_cols=258 Identities=25% Similarity=0.347 Sum_probs=196.0
Q ss_pred CCCcccceeeecCceEEEEEEec--CCeEEEEEEeccCchh--hHHHHHHHHHHhccC---CcCceeeEEEEEe-----c
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV--PGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRI---RHKNLVTLIGYYV-----G 842 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~~~~~-----~ 842 (1052)
.+|++.+.||+|+||+||+|+.. +++.||+|++...... ....+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36899999999999999999753 4688999988654322 234456677766655 6999999999985 2
Q ss_pred CCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccc
Q 001562 843 EAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGL 922 (1052)
Q Consensus 843 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgl 922 (1052)
....++||||++ ++|.+++.......+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456899999995 6999999876656789999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHh-C
Q 001562 923 ARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKE-G 1001 (1052)
Q Consensus 923 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~ 1001 (1052)
++..... .......|++.|+|||.+.+..++.++||||+||++|||++|++||...... +........ +
T Consensus 157 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~--------~~~~~i~~~~~ 226 (290)
T cd07862 157 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--------DQLGKILDVIG 226 (290)
T ss_pred eEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH--------HHHHHHHHHhC
Confidence 9865432 2233456899999999999888999999999999999999999999743221 111111110 0
Q ss_pred Ccc------------ccccchh---hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1002 RSS------------ELFLPEL---WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1002 ~~~------------~~~~~~l---~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
... ..+.+.- .....+.....+.+++.+|++.||++|||+.|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 227 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000 0000000 00001123445789999999999999999999985
No 84
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.1e-34 Score=315.33 Aligned_cols=250 Identities=25% Similarity=0.406 Sum_probs=203.1
Q ss_pred CCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 776 NFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
+|++.+.||+|+||.||+|.+.++..+|+|++..... ...++.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 5888899999999999999887777899998864432 335788899999999999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
++|.+++.... ..++++.+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++...........
T Consensus 84 ~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (256)
T cd05059 84 GCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ 159 (256)
T ss_pred CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence 99999998654 3689999999999999999999999 9999999999999999999999999999865432222222
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEA 1014 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1014 (1052)
...++..|+|||.+.+..++.++||||||+++|||++ |+.||...... +..+.. ..+.. . .
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~-~~~~~-----~----~ 221 (256)
T cd05059 160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--------EVVESV-SAGYR-----L----Y 221 (256)
T ss_pred CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--------HHHHHH-HcCCc-----C----C
Confidence 2234568999999999899999999999999999999 78888632111 111111 11111 0 1
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001562 1015 GPQENLLGMMRLASTCTVETLSTRPSVKQVLIKL 1048 (1052)
Q Consensus 1015 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L 1048 (1052)
.+...+..+.+++.+||+.+|++||++.|+++.|
T Consensus 222 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 222 RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 1222455699999999999999999999999886
No 85
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.4e-35 Score=304.75 Aligned_cols=261 Identities=25% Similarity=0.346 Sum_probs=204.9
Q ss_pred CCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchh--hHHHHHHHHHHhccCCcCc-eeeEEEEEecCC------
Q 001562 775 GNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIRHKN-LVTLIGYYVGEA------ 844 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~------ 844 (1052)
..|+..++||+|+||+||+|+. .+|+.||+|++.....+ ......+|+.++++++|+| |+++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 3567778899999999999954 46899999999766542 2355688999999999999 999999998877
Q ss_pred eEEEEEeecCCCCHHHHHhhccC--CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccc
Q 001562 845 EMFLVYNFLSGGNLETFIHKKSG--KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGL 922 (1052)
Q Consensus 845 ~~~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgl 922 (1052)
..++|+||+ .-+|..|+..... ..++...+..++.||+.|++|||++ +|+||||||+||+++++|.+||+|||+
T Consensus 91 ~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence 789999999 6799999988753 3577788999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhC
Q 001562 923 ARLLEVSETHATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEG 1001 (1052)
Q Consensus 923 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1052)
|+...... ......++|..|.|||++.+. .|+...||||+|||+.||+++++-|.+..+ ..+..+....-|
T Consensus 167 Ara~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-------~~ql~~If~~lG 238 (323)
T KOG0594|consen 167 ARAFSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-------IDQLFRIFRLLG 238 (323)
T ss_pred HHHhcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-------HHHHHHHHHHcC
Confidence 99665222 224456789999999999886 688999999999999999999988875432 222222222222
Q ss_pred Cccccccchhh----------cCC-C-------HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1002 RSSELFLPELW----------EAG-P-------QENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1002 ~~~~~~~~~l~----------~~~-~-------~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
...+...|... ... + +.......+++.+|++++|.+|.|++.+++.
T Consensus 239 tP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 239 TPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 22222222211 000 1 1111368899999999999999999999875
No 86
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.6e-34 Score=315.93 Aligned_cols=255 Identities=27% Similarity=0.440 Sum_probs=207.0
Q ss_pred CCCcccceeeecCceEEEEEEecC----CeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELVP----GYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
++|++.+.||+|+||.||+|.+.. ...||+|.+..... ....++.+|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568999999999999999997642 45799998865433 3356788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
|||+++++|.+++.... ..+++..+.+++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++.....
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 84 TEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999997754 4689999999999999999999998 9999999999999999999999999999876522
Q ss_pred c-cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc
Q 001562 930 E-THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF 1007 (1052)
Q Consensus 930 ~-~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
. ........++..|+|||.+.+..++.++||||||+++|||++ |..||..... .+..+.. ..+...
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~~-~~~~~~--- 227 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN--------QDVIKAV-EDGYRL--- 227 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH--------HHHHHHH-HcCCCC---
Confidence 2 112222345678999999999899999999999999999998 9888853211 1122222 111111
Q ss_pred cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1008 LPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1008 ~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+..++..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 228 ------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 ------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11223345689999999999999999999999999875
No 87
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.2e-35 Score=330.68 Aligned_cols=245 Identities=26% Similarity=0.367 Sum_probs=200.7
Q ss_pred hCCCcccceeeecCceEEEEEEecC--CeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP--GYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
.++|++.+.||+|+||.||+|.... +..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3569999999999999999997543 3689999886432 2334678889999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
||||+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 109 v~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999765 4689999999999999999999999 999999999999999999999999999986542
Q ss_pred cccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||....+ ....+... .+..
T Consensus 184 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~--------~~~~~~i~-~~~~----- 245 (340)
T PTZ00426 184 R----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP--------LLIYQKIL-EGII----- 245 (340)
T ss_pred C----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH--------HHHHHHHh-cCCC-----
Confidence 2 2235689999999999998899999999999999999999999974321 11112221 1111
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRP-----SVKQVLI 1046 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RP-----s~~eil~ 1046 (1052)
..|......+.+++++|++.||++|+ +++|+++
T Consensus 246 -----~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 246 -----YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred -----CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 01222234578999999999999995 7888765
No 88
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.7e-34 Score=322.02 Aligned_cols=260 Identities=23% Similarity=0.348 Sum_probs=199.5
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh-hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ-GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
.++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+|+++++.++||||+++++++.++...++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 367999999999999999999765 6889999998754332 23467789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|+ .++|.+++.... ..++++.+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++...... .
T Consensus 84 ~~-~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~ 157 (303)
T cd07869 84 YV-HTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVP-S 157 (303)
T ss_pred CC-CcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCC-C
Confidence 99 578888887653 5688999999999999999999999 9999999999999999999999999998754322 1
Q ss_pred ccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHh-CCcc-----
Q 001562 932 HATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKE-GRSS----- 1004 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----- 1004 (1052)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||..... ..+..+..... +...
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 230 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD-------IQDQLERIFLVLGTPNEDTWP 230 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc-------HHHHHHHHHHHhCCCChhhcc
Confidence 22234567899999999875 4578899999999999999999999974311 11111111110 0000
Q ss_pred -----ccccchhhcC-CC---------HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1005 -----ELFLPELWEA-GP---------QENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1005 -----~~~~~~l~~~-~~---------~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+++..... .+ ......+.+++.+|++.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 231 GVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred chhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0011110000 00 011245789999999999999999999985
No 89
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.1e-34 Score=319.67 Aligned_cols=255 Identities=24% Similarity=0.403 Sum_probs=207.0
Q ss_pred CCCcccceeeecCceEEEEEEecC------CeEEEEEEeccCchh-hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELVP------GYLVAVKKLSIGRFQ-GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 847 (1052)
++|.+.+.||+|+||.||+|.... ++.||+|+++..... ..+.+.+|++++++++|+|++++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 468889999999999999996643 478999998765444 4578999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcc------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcE
Q 001562 848 LVYNFLSGGNLETFIHKKS------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNA 915 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~ 915 (1052)
+||||+++++|.++++... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 9999999999999997642 23578899999999999999999999 99999999999999999999
Q ss_pred EEEecccccccccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHH
Q 001562 916 YLSDFGLARLLEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSW 993 (1052)
Q Consensus 916 kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 993 (1052)
+|+|||++........ .......+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... .+.
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~--------~~~ 233 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN--------EEV 233 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH--------HHH
Confidence 9999999976533222 12223345788999999999999999999999999999998 9999863221 111
Q ss_pred HHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 994 AKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
.... ..+... ..+...+..+.+++.+||+.||++||++.|+++.|++
T Consensus 234 ~~~~-~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 234 IECI-TQGRLL---------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHH-HcCCcC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 2221 222111 1112334568999999999999999999999999864
No 90
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.2e-34 Score=324.75 Aligned_cols=199 Identities=27% Similarity=0.460 Sum_probs=174.8
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
.++|++.+.||+|+||.||+|... ++..+|+|.+.... .....++.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 468999999999999999999765 57889999886543 2334678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|+++++|.++++.. ..+++..+..++.|++.|++|||+.. +|+||||||+||++++++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-- 157 (333)
T cd06650 84 HMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (333)
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--
Confidence 99999999999765 45889999999999999999999752 7999999999999999999999999999755321
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDP 979 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~ 979 (1052)
......|+..|+|||.+.+..++.++||||+||++|||++|+.||..
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred -ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 12334688999999999998899999999999999999999999974
No 91
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.5e-34 Score=319.38 Aligned_cols=265 Identities=27% Similarity=0.409 Sum_probs=205.6
Q ss_pred CCCcccceeeecCceEEEEEEec-----CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEec--CCeEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-----PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVG--EAEMF 847 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 847 (1052)
.+|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 47889999999999999999642 478999999877666666789999999999999999999998754 34689
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+|+||+++++|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||++++++.++|+|||++....
T Consensus 84 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 9999999999999997653 4589999999999999999999999 99999999999999999999999999998764
Q ss_pred cccccc--ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCC----CC---cchHHHHHHHH
Q 001562 928 VSETHA--TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYG----NG---FNIVSWAKLLI 998 (1052)
Q Consensus 928 ~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~----~~---~~~~~~~~~~~ 998 (1052)
...... .....++..|+|||.+.+..++.++||||+|+++|||++|..|+........ .. ...........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELL 239 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHH
Confidence 322211 1112334569999999988899999999999999999998876542211100 00 00000001111
Q ss_pred HhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 001562 999 KEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQLK 1052 (1052)
Q Consensus 999 ~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ik 1052 (1052)
..... ...+...+..+.+++.+||+.+|++|||+.|+++.|+++|
T Consensus 240 ~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 240 KNNGR---------LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred hcCCc---------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 11100 0112233456999999999999999999999999999886
No 92
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=7.5e-35 Score=327.26 Aligned_cols=241 Identities=23% Similarity=0.300 Sum_probs=195.6
Q ss_pred ceeeecCceEEEEEEe-cCCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCC
Q 001562 781 NLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGG 856 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 856 (1052)
+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|++++++++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999965 468999999986532 233456778999999999999999999999999999999999999
Q ss_pred CHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccC
Q 001562 857 NLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTD 936 (1052)
Q Consensus 857 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 936 (1052)
+|..++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++...... ......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~~~ 154 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKT 154 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCC-CCcccc
Confidence 999988765 4689999999999999999999999 9999999999999999999999999998753221 122234
Q ss_pred ccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCC
Q 001562 937 VAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGP 1016 (1052)
Q Consensus 937 ~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1016 (1052)
..|++.|+|||.+.+..++.++||||+||++|||++|+.||..... .+..+...... . . .+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--------~~~~~~~~~~~-~------~----~p 215 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------ERLFELILMEE-I------R----FP 215 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcCC-C------C----CC
Confidence 5689999999999999999999999999999999999999964221 11112221111 0 1 12
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001562 1017 QENLLGMMRLASTCTVETLSTRP-----SVKQVLI 1046 (1052)
Q Consensus 1017 ~~~~~~l~~Li~~cl~~dP~~RP-----s~~eil~ 1046 (1052)
......+.+++.+|++.||++|| ++.++++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 22344588999999999999998 7888764
No 93
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.7e-34 Score=314.80 Aligned_cols=257 Identities=28% Similarity=0.431 Sum_probs=211.1
Q ss_pred hhCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
..++|++.++||+|+||.||+|...++..||+|.+..... ..+++.+|+.++++++|+|++++++++......++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 4568999999999999999999888788899999875443 346789999999999999999999999988999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++....+..+++..+..++.|++.|++|||+. +|+|+||+|+||++++++.++++|||.+.........
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 159 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT 159 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence 9999999999876666799999999999999999999999 9999999999999999999999999999866532222
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
.......+..|+|||.+.+..++.++||||+|+++||+++ |+.||.... .....+... .+..
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--------~~~~~~~~~-~~~~-------- 222 (261)
T cd05034 160 AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT--------NREVLEQVE-RGYR-------- 222 (261)
T ss_pred hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHH-cCCC--------
Confidence 2223335568999999998889999999999999999999 898885321 111112111 1110
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
...+...+..+.+++.+|++.+|++||+++++.+.|+.+
T Consensus 223 -~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~~ 261 (261)
T cd05034 223 -MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLEDY 261 (261)
T ss_pred -CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhcC
Confidence 011222345689999999999999999999999999864
No 94
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.5e-35 Score=321.58 Aligned_cols=267 Identities=24% Similarity=0.345 Sum_probs=202.7
Q ss_pred CcccceeeecCceEEEEEEe-----cCCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecC--CeEEE
Q 001562 777 FSIRNLIGTGGFGSTYKAEL-----VPGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE--AEMFL 848 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 848 (1052)
|++.+.||+|+||+||++.. .++..||+|.+..... .....+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 38889999999999988642 3578899999875533 3356788999999999999999999988653 46899
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
||||+++++|.+++... .+++.++..++.|++.|++|||++ +|+||||||+||++++++.++|+|||++.....
T Consensus 86 v~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred EecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 99999999999999764 489999999999999999999999 999999999999999999999999999986643
Q ss_pred cccc--cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 929 SETH--ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 929 ~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.... ......++..|+|||.+.+..++.++||||||+++|||+||+.|+.......... ................
T Consensus 160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 160 GHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEM---IGPKQGQMTVVRLIEL 236 (283)
T ss_pred cchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhh---hcccccccchhhhhhh
Confidence 2211 1122345667999999998889999999999999999999999986432211000 0000000000000000
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQLK 1052 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ik 1052 (1052)
.+.......+...+..+.+++.+||+.+|++||+++++++.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 0001111123344567999999999999999999999999999864
No 95
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.3e-35 Score=327.10 Aligned_cols=239 Identities=23% Similarity=0.320 Sum_probs=194.1
Q ss_pred eeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCH
Q 001562 783 IGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNL 858 (1052)
Q Consensus 783 Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 858 (1052)
||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999665 57899999986432 23346678899999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccCcc
Q 001562 859 ETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTDVA 938 (1052)
Q Consensus 859 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 938 (1052)
.+++... ..+++..+..++.|+++|++|||++ +|+||||||+||+++.++.++|+|||+++..... ........
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~ 154 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD-DDKTNTFC 154 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC-CCcccccc
Confidence 9999764 4689999999999999999999999 9999999999999999999999999999754322 12233456
Q ss_pred ccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHH
Q 001562 939 GTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQE 1018 (1052)
Q Consensus 939 g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1018 (1052)
|++.|+|||.+.+..++.++||||+||++|||++|+.||.... ..+..+..... .. ..+..
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~--------~~~~~~~~~~~-~~----------~~~~~ 215 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN--------VNEMYRKILQE-PL----------RFPDG 215 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC--------HHHHHHHHHcC-CC----------CCCCc
Confidence 8999999999999999999999999999999999999997421 22222222221 10 11223
Q ss_pred HHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 001562 1019 NLLGMMRLASTCTVETLSTRPS---VKQVLI 1046 (1052)
Q Consensus 1019 ~~~~l~~Li~~cl~~dP~~RPs---~~eil~ 1046 (1052)
....+.+++.+||+.||++||+ +.|++.
T Consensus 216 ~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 216 FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 3445889999999999999985 555543
No 96
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.1e-34 Score=319.32 Aligned_cols=256 Identities=24% Similarity=0.411 Sum_probs=208.6
Q ss_pred CCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
++|.+.+.||+|+||.||+|+.. ++..+++|.+........+.+.+|++.+++++|+||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45888899999999999999643 356689999876666666788999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcc--------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCc
Q 001562 849 VYNFLSGGNLETFIHKKS--------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELN 914 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~ 914 (1052)
||||+++++|.+++.... ...+++..+.+++.|++.|++|||++ +|+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999997642 23478999999999999999999999 9999999999999999999
Q ss_pred EEEEecccccccccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHH
Q 001562 915 AYLSDFGLARLLEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVS 992 (1052)
Q Consensus 915 ~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 992 (1052)
++|+|||++........ .......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... +
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--------~ 233 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT--------E 233 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------H
Confidence 99999999976543221 12233456788999999999899999999999999999999 99988643211 1
Q ss_pred HHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 993 WAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+ ....+.... .+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 234 ~~~-~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~ 282 (291)
T cd05094 234 VIE-CITQGRVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282 (291)
T ss_pred HHH-HHhCCCCCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 111 122222111 1122345689999999999999999999999999876
No 97
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=9.8e-35 Score=327.77 Aligned_cols=259 Identities=24% Similarity=0.366 Sum_probs=204.0
Q ss_pred hhCCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCch-hhHHHHHHHHHHhccC-CcCceeeEEEEEec-C
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRI-RHKNLVTLIGYYVG-E 843 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~ 843 (1052)
..++|++.++||+|+||.||+|... +++.||+|++..... ...+.+..|+++++++ +|+||++++++|.. +
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 4457999999999999999999532 247899999865432 2345678899999999 89999999998864 4
Q ss_pred CeEEEEEeecCCCCHHHHHhhccC--------------------------------------------------------
Q 001562 844 AEMFLVYNFLSGGNLETFIHKKSG-------------------------------------------------------- 867 (1052)
Q Consensus 844 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 867 (1052)
...++++||+++++|.+++.....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 578899999999999999865321
Q ss_pred ---CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc-cccCccccccc
Q 001562 868 ---KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH-ATTDVAGTFGY 943 (1052)
Q Consensus 868 ---~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~g~~~y 943 (1052)
..+++..+.+++.||+.|++|||++ +|+||||||+||++++++.++|+|||++..+...... ......++..|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 2678999999999999999999999 9999999999999999999999999999866432221 22334566789
Q ss_pred cccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHH
Q 001562 944 VAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLG 1022 (1052)
Q Consensus 944 ~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1022 (1052)
+|||++.+..++.++||||+||++|||++ |..||...... +........+... ..+.....+
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~ 304 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID--------EEFCRRLKEGTRM---------RAPEYATPE 304 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc--------HHHHHHHhccCCC---------CCCccCCHH
Confidence 99999999999999999999999999998 99888642211 1111122222111 111223445
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1023 MMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1023 l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
+.+++.+||+.+|++||++.|+++.|+++
T Consensus 305 ~~~l~~~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 305 IYSIMLDCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 88999999999999999999999999864
No 98
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=8.5e-35 Score=327.38 Aligned_cols=241 Identities=23% Similarity=0.319 Sum_probs=196.3
Q ss_pred ceeeecCceEEEEEEe-cCCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCC
Q 001562 781 NLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGG 856 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 856 (1052)
++||+|+||.||+|.. .+++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999965 468999999986532 233567788999999999999999999999999999999999999
Q ss_pred CHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccC
Q 001562 857 NLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTD 936 (1052)
Q Consensus 857 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 936 (1052)
+|.+++... ..+++.++..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+++..... ......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~ 154 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATMKT 154 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCc-cccccc
Confidence 999998764 4689999999999999999999999 9999999999999999999999999998753221 122234
Q ss_pred ccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCC
Q 001562 937 VAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGP 1016 (1052)
Q Consensus 937 ~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1016 (1052)
..|++.|+|||.+.+..++.++||||+||++|||++|+.||.... ..+..+.... +. .. .+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~--------~~~~~~~~~~-~~------~~----~p 215 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELILM-ED------IK----FP 215 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC--------HHHHHHHhcc-CC------cc----CC
Confidence 568999999999999899999999999999999999999996421 1122222111 11 01 12
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001562 1017 QENLLGMMRLASTCTVETLSTRP-----SVKQVLI 1046 (1052)
Q Consensus 1017 ~~~~~~l~~Li~~cl~~dP~~RP-----s~~eil~ 1046 (1052)
......+.+++.+|++.||++|| ++.|+++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 22344588999999999999997 8888875
No 99
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.1e-34 Score=318.78 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=207.3
Q ss_pred CCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
.+|.+.+.||+|+||.||++... ++..+|+|.+..........+.+|++++++++|||++++++++......++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46889999999999999999642 346689999876655556789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcc-----------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEE
Q 001562 849 VYNFLSGGNLETFIHKKS-----------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYL 917 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl 917 (1052)
||||+++++|.+++.... ...+++.++..++.|++.|++|||++ +++||||||+||++++++.++|
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEe
Confidence 999999999999997542 13489999999999999999999999 9999999999999999999999
Q ss_pred Eecccccccccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHH
Q 001562 918 SDFGLARLLEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAK 995 (1052)
Q Consensus 918 ~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 995 (1052)
+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+..+
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~--------~~~~~ 233 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--------NEVIE 233 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHH
Confidence 99999986543221 11223345678999999999899999999999999999999 8888863321 11112
Q ss_pred HHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 996 LLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+..+.... . +...+..+.+++.+||+.+|.+|||+.|+.+.|+++
T Consensus 234 -~i~~~~~~~-----~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 234 -CITQGRVLQ-----R----PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred -HHHcCCcCC-----C----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 222222111 1 112234589999999999999999999999999875
No 100
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.9e-34 Score=317.25 Aligned_cols=257 Identities=20% Similarity=0.358 Sum_probs=204.4
Q ss_pred hhCCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCe
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAE 845 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 845 (1052)
..++|++.+.||+|+||.||+|... ++..||+|++.... .....++.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567999999999999999999653 24679999885432 2334578899999999999999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhccC--------CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEE
Q 001562 846 MFLVYNFLSGGNLETFIHKKSG--------KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYL 917 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~--------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl 917 (1052)
.++||||+++++|.+++..... ..+++..+..++.|+++|++|||+. +++||||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 9999999999999999976421 2357788999999999999999998 9999999999999999999999
Q ss_pred Eeccccccccccccc-cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHH
Q 001562 918 SDFGLARLLEVSETH-ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAK 995 (1052)
Q Consensus 918 ~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 995 (1052)
+|||++......... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||..... .+..+
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--------~~~~~ 232 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--------EQVLR 232 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHH
Confidence 999999765433222 1122345778999999999889999999999999999999 6778753211 12222
Q ss_pred HHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 996 LLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
.... +... ..+...+..+.+++.+|++.+|++||++.|+++.+++
T Consensus 233 ~~~~-~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 233 FVME-GGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHc-CCcC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 2222 1111 1122234568999999999999999999999999864
No 101
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.1e-34 Score=327.81 Aligned_cols=251 Identities=26% Similarity=0.352 Sum_probs=199.9
Q ss_pred CCcccceeeecCceEEEEEEe----cCCeEEEEEEeccCc----hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeE
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL----VPGYLVAVKKLSIGR----FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEM 846 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 846 (1052)
+|++.+.||+|+||.||+|+. .+++.||+|++.... ....+.+..|+++++.+ +|++|+++++++.+++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 488899999999999999965 357899999986432 22345678899999999 599999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccc
Q 001562 847 FLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLL 926 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~ 926 (1052)
++||||+++|+|.+++... ..++++.+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 9999999999999999765 4689999999999999999999999 9999999999999999999999999999865
Q ss_pred cccccccccCccccccccccccccCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 927 EVSETHATTDVAGTFGYVAPEYATTCR-VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 927 ~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
............|++.|+|||++.+.. ++.++|||||||++|||+||+.||...... .......+.... .
T Consensus 156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----~~~~~~~~~~~~-~---- 226 (332)
T cd05614 156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER----NTQSEVSRRILK-C---- 226 (332)
T ss_pred cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC----CCHHHHHHHHhc-C----
Confidence 433333334457899999999998754 788999999999999999999999743221 111122222211 1
Q ss_pred cccchhhcCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001562 1006 LFLPELWEAGPQENLLGMMRLASTCTVETLSTRP-----SVKQVLI 1046 (1052)
Q Consensus 1006 ~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RP-----s~~eil~ 1046 (1052)
++.+ +......+.+++.+|++.||++|| +++++++
T Consensus 227 --~~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 227 --DPPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred --CCCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 1111 222344588999999999999999 6777764
No 102
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2e-34 Score=323.29 Aligned_cols=254 Identities=22% Similarity=0.405 Sum_probs=202.4
Q ss_pred CCCcccceeeecCceEEEEEEec-CCe----EEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGY----LVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
.+|++.+.||+|+||.||+|.+. +++ .||+|++.... ....+++.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46899999999999999999754 233 48999986543 23456788999999999999999999999764 5789
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
|+||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||+++....
T Consensus 86 v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccccC
Confidence 999999999999998754 4688999999999999999999999 999999999999999999999999999987653
Q ss_pred ccccc-ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 929 SETHA-TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 929 ~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
..... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..++ ......+...
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~--------~~~~-~~~~~~~~~~-- 230 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--------ASEI-SSILEKGERL-- 230 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--------HHHH-HHHHhCCCCC--
Confidence 32211 122334678999999999999999999999999999998 999886321 1111 1222222111
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+..+...+.+++.+||+.+|++||++.++++.+.++
T Consensus 231 -------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~ 268 (316)
T cd05108 231 -------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 268 (316)
T ss_pred -------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11122334588999999999999999999999998764
No 103
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.3e-34 Score=317.75 Aligned_cols=251 Identities=26% Similarity=0.348 Sum_probs=202.0
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
.|++.++||+|+||+||+|... +++.||+|++..... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3788899999999999999654 689999999865332 223457789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|+++|+|.+++.......+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 99999999998765445689999999999999999999999 99999999999999999999999999998654222
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
......|++.|+|||++.+..++.++||||+||++|||++|+.||...... ...+..........
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~~--------- 221 (285)
T cd05605 157 -TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-----VKREEVERRVKEDQ--------- 221 (285)
T ss_pred -ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-----hHHHHHHHHhhhcc---------
Confidence 122346889999999999888999999999999999999999999742211 11111111111111
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRP-----SVKQVLI 1046 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RP-----s~~eil~ 1046 (1052)
...+...+..+.+++.+||+.||++|| +++++++
T Consensus 222 -~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 222 -EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred -cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 111223445588999999999999999 8888865
No 104
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.5e-34 Score=319.20 Aligned_cols=256 Identities=26% Similarity=0.413 Sum_probs=204.6
Q ss_pred CCCcccceeeecCceEEEEEEe-----cCCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAEL-----VPGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
.+|++.+.||+|+||.||+|.. ..+..||+|.+.... .+...++.+|++++++++||||+++++++......|+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4688889999999999999964 245789999987433 2334678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcc---------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC
Q 001562 849 VYNFLSGGNLETFIHKKS---------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL 913 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~ 913 (1052)
||||+++++|.+++.... ...+++.++..++.|++.|++|||++ +|+||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 999999999999986432 13478889999999999999999999 999999999999999999
Q ss_pred cEEEEecccccccccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchH
Q 001562 914 NAYLSDFGLARLLEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIV 991 (1052)
Q Consensus 914 ~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~ 991 (1052)
.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||.... ..
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~--------~~ 233 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--------NQ 233 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--------HH
Confidence 999999999986543221 22233345678999999998889999999999999999999 888886321 11
Q ss_pred HHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 992 SWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
+..+.+ ...... ..+...+..+.+++.+||+.||++||++.++.+.|+.+
T Consensus 234 ~~~~~~-~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05090 234 EVIEMV-RKRQLL---------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHHHH-HcCCcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhcC
Confidence 222222 221111 11223345689999999999999999999999998753
No 105
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.4e-34 Score=315.21 Aligned_cols=256 Identities=23% Similarity=0.419 Sum_probs=208.9
Q ss_pred hhCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
..++|++.+.||+|+||.||+|....+..+|+|.+.... ...+.+.+|++++++++|+|++++++++.+ ...+++|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 456899999999999999999987778889999886543 335678899999999999999999999887 778999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++.......+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+.........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 158 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 158 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence 9999999999876666789999999999999999999998 9999999999999999999999999999866433322
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
......++..|+|||.+.+..++.++|+||||+++||+++ |+.||..... ... ......+....
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--------~~~-~~~~~~~~~~~------ 223 (260)
T cd05073 159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--------PEV-IRALERGYRMP------ 223 (260)
T ss_pred cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH--------HHH-HHHHhCCCCCC------
Confidence 2233345678999999998889999999999999999999 8888863211 111 11112221111
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+...+..+.+++.+|++.+|++||++.++.+.|+++
T Consensus 224 ---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 224 ---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred ---CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 1122345689999999999999999999999999864
No 106
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.8e-34 Score=324.90 Aligned_cols=245 Identities=23% Similarity=0.326 Sum_probs=193.8
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
+.||+|+||.||+|... +++.||+|++.... ......+..|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999764 57899999987542 23345677888888776 799999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~-~~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTS 154 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCC-CCccc
Confidence 9999988764 4689999999999999999999999 9999999999999999999999999998753221 12223
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||++.+..++.++||||+||++|||++|+.||...............+....+...... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~----------~ 224 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR----------I 224 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCC----------C
Confidence 456899999999999999999999999999999999999999643222111222222332222222111 1
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSV 1041 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~ 1041 (1052)
|......+.+++.+|++.||++||++
T Consensus 225 p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 225 PRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 22334458899999999999999984
No 107
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.2e-34 Score=331.36 Aligned_cols=253 Identities=22% Similarity=0.306 Sum_probs=202.0
Q ss_pred hhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+....++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3457999999999999999999664 58899999986432 2234557889999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
||||+++|+|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 121 v~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999999764 478888999999999999999999 999999999999999999999999999986643
Q ss_pred cccccccCccccccccccccccCC----CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTC----RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSS 1004 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
..........|++.|+|||++.+. .++.++||||+||++|||++|+.||..... ............ .
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--------~~~~~~i~~~~~-~ 265 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--------VGTYSKIMDHKN-S 265 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH--------HHHHHHHHcCCC-c
Confidence 332233445799999999998653 377899999999999999999999974321 122222222111 1
Q ss_pred ccccchhhcCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 001562 1005 ELFLPELWEAGPQENLLGMMRLASTCTVETLST--RPSVKQVLI 1046 (1052)
Q Consensus 1005 ~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~--RPs~~eil~ 1046 (1052)
..+ + .....+..+.+++.+|+..+|++ ||++.|+++
T Consensus 266 ~~~-~-----~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 266 LTF-P-----DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCC-C-----CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 000 0 11123456889999999999988 999999975
No 108
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6e-35 Score=329.72 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=202.9
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||+||+|... +++.||+|+++.... ...+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36899999999999999999654 688999999875432 23456888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|+|.+++.... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 9999999999998763 4689999999999999999999999 99999999999999999999999999998765433
Q ss_pred cccccCcccccccccccccc------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcc
Q 001562 931 THATTDVAGTFGYVAPEYAT------TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSS 1004 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~------~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
........|++.|+|||++. ...++.++||||+||++|||++|+.||..... .+....+.......
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~--------~~~~~~i~~~~~~~ 228 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS--------AKTYNNIMNFQRFL 228 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH--------HHHHHHHHcCCCcc
Confidence 33333456899999999987 45677899999999999999999999974321 12222222211111
Q ss_pred ccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1005 ELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1005 ~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. + .........+.+++..|++ +|++||+++++++
T Consensus 229 ~-~------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 229 K-F------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred C-C------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0 0 0111234458899999998 9999999999874
No 109
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2e-34 Score=324.70 Aligned_cols=250 Identities=23% Similarity=0.318 Sum_probs=197.6
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
++||+|+||.||+|... +++.||+|+++... ....+.+..|..+++++ +||||+++++++.+....|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999664 58899999987532 23345678899999888 799999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDTTS 154 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccC-CCccc
Confidence 9999998764 4699999999999999999999999 9999999999999999999999999998742211 12223
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||++.+..++.++||||+||++|||++|+.||+.............++....+...... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 224 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR----------I 224 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC----------C
Confidence 456899999999999999999999999999999999999999743222111222223333333322211 1
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCC------HHHHHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPS------VKQVLI 1046 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs------~~eil~ 1046 (1052)
|......+.+++.+|++.||++||+ ++|+++
T Consensus 225 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 225 PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 2223345889999999999999997 566653
No 110
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2e-34 Score=323.99 Aligned_cols=241 Identities=24% Similarity=0.365 Sum_probs=195.1
Q ss_pred ceeeecCceEEEEEEe----cCCeEEEEEEeccCc----hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 781 NLIGTGGFGSTYKAEL----VPGYLVAVKKLSIGR----FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+.||+|+||.||+|+. ..++.||+|++.... ......+.+|+++++.++||||+++++++.+++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999964 357899999986532 12345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++... ..+.+..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 155 (323)
T cd05584 82 LSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-T 155 (323)
T ss_pred CCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-C
Confidence 9999999999765 4678889999999999999999999 99999999999999999999999999987543222 2
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
......|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......... +..
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~--------~~~~~~~~~-~~~--------- 217 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR--------KKTIDKILK-GKL--------- 217 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH--------HHHHHHHHc-CCC---------
Confidence 22335689999999999998899999999999999999999999974321 122222221 111
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRP-----SVKQVLI 1046 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RP-----s~~eil~ 1046 (1052)
..+......+.+++.+|++.||++|| ++.++++
T Consensus 218 -~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 218 -NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 11222344588999999999999999 7887765
No 111
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.6e-34 Score=317.93 Aligned_cols=258 Identities=24% Similarity=0.377 Sum_probs=207.2
Q ss_pred hCCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCc-hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCe
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAE 845 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 845 (1052)
.++|++.+.||+|+||.||+|... .+..||+|+++... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 356899999999999999999642 34579999886543 33356789999999999 79999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccc
Q 001562 846 MFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARL 925 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~ 925 (1052)
.++||||+++|+|.++++......+++.++..++.|++.|++|||++ +|+|+||||+||+++.++.++++|||++..
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccccc
Confidence 99999999999999999875545589999999999999999999999 999999999999999999999999999986
Q ss_pred cccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCc
Q 001562 926 LEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRS 1003 (1052)
Q Consensus 926 ~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
...... .......++..|+|||.+.+..++.++||||+||++|||++ |+.||...... +........+..
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~ 262 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD--------SKFYKLIKEGYR 262 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch--------HHHHHHHHcCCc
Confidence 543221 12222345678999999999999999999999999999998 89888643211 111122222211
Q ss_pred cccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1004 SELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1004 ~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
. ..+...+..+.+++.+|++.+|++||++.|+++.|+++
T Consensus 263 ~---------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 263 M---------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred C---------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1 01112234689999999999999999999999999864
No 112
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.3e-34 Score=337.92 Aligned_cols=254 Identities=24% Similarity=0.321 Sum_probs=204.8
Q ss_pred HhhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCC----
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA---- 844 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 844 (1052)
...++|++.+.||+|+||+||+|.. .+|+.||||++.... ......+.+|+.++..++|+|++++++.+....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 4457899999999999999999964 468999999986543 334567888999999999999999988765332
Q ss_pred ----eEEEEEeecCCCCHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEE
Q 001562 845 ----EMFLVYNFLSGGNLETFIHKKS--GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLS 918 (1052)
Q Consensus 845 ----~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~ 918 (1052)
..++||||+++|+|.++++... ...+++..+..++.|++.|+.|+|+. +|+||||||+||+++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEE
Confidence 3689999999999999997532 35689999999999999999999999 99999999999999999999999
Q ss_pred eccccccccccc-cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH
Q 001562 919 DFGLARLLEVSE-THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLL 997 (1052)
Q Consensus 919 Dfgla~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
|||+++.+.... ........||+.|+|||.+.+..++.++|||||||++|||++|+.||... ...+.....
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~--------~~~~~~~~~ 257 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE--------NMEEVMHKT 257 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHH
Confidence 999998664322 12233457899999999999999999999999999999999999999742 222333322
Q ss_pred HHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 998 IKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 998 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
... ... ..+...+..+.+++.+||+.||++||++.++++
T Consensus 258 ~~~-~~~---------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 258 LAG-RYD---------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred hcC-CCC---------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 221 111 112334456899999999999999999999875
No 113
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.8e-34 Score=325.81 Aligned_cols=260 Identities=22% Similarity=0.351 Sum_probs=195.0
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccC--chhhHHHHHHHHHHhccCCcCceeeEEEEEecC-----CeEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIG--RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE-----AEMF 847 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 847 (1052)
+|++.++||+|+||.||+|.. .+++.||||++... ......++.+|++++++++||||+++++++... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 588899999999999999965 46899999998643 223345688999999999999999999988643 3479
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+||||+ +++|.+++... ..+++..+..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELM-ESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecC-CCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 999999 57999998764 4689999999999999999999999 99999999999999999999999999998553
Q ss_pred cccc--ccccCccccccccccccccC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH------
Q 001562 928 VSET--HATTDVAGTFGYVAPEYATT--CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLL------ 997 (1052)
Q Consensus 928 ~~~~--~~~~~~~g~~~y~aPE~~~~--~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~------ 997 (1052)
.... .......|++.|+|||++.+ ..++.++||||+||++|||++|+.||...... .........
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~-----~~~~~~~~~~~~~~~ 229 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV-----HQLDLITDLLGTPSP 229 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH-----HHHHHHHHHhCCCCH
Confidence 2211 12234578999999999876 67889999999999999999999999643210 000000000
Q ss_pred -----HHhCCcccc---cc---chhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 998 -----IKEGRSSEL---FL---PELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 998 -----~~~~~~~~~---~~---~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+........ +. +......-+.....+.+++.+||+.||++||+++|+++
T Consensus 230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 230 ETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000000000 00 00000000112345789999999999999999999985
No 114
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=7.4e-34 Score=308.76 Aligned_cols=251 Identities=27% Similarity=0.423 Sum_probs=207.8
Q ss_pred hCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
.++|++.+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++++++|+|++++++++.+....++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 357889999999999999999765 88999999876544 4578899999999999999999999999989999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++++|.+++.......+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-- 157 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-- 157 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence 999999999876555789999999999999999999999 999999999999999999999999999986532211
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
....+..|+|||.+.+..++.++||||||+++||+++ |..||..... .+ .......+...
T Consensus 158 --~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~-~~~~~~~~~~~-------- 218 (256)
T cd05039 158 --SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KD-VVPHVEKGYRM-------- 218 (256)
T ss_pred --cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--------HH-HHHHHhcCCCC--------
Confidence 2234568999999998889999999999999999997 9888863211 11 11111111111
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+...+..+.+++.+|+..+|++||++.|++++|+++
T Consensus 219 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 219 -EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred -CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 11222345689999999999999999999999999875
No 115
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.5e-34 Score=323.45 Aligned_cols=244 Identities=25% Similarity=0.321 Sum_probs=194.2
Q ss_pred CcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHH---hccCCcCceeeEEEEEecCCeEEEE
Q 001562 777 FSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGT---LGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~---l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
|++.+.||+|+||.||+|... +++.||||+++... ....+.+..|.++ ++.++||||+++++++.+....|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 678899999999999999654 58999999986432 2223455666554 4567899999999999999999999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
|||+++++|..+++. ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999999988864 3589999999999999999999999 9999999999999999999999999998743221
Q ss_pred ccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 930 ETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 930 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
........|++.|+|||.+.+..++.++|||||||++|||++|+.||..... .+......... .
T Consensus 155 -~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~--------~~~~~~i~~~~-~------ 218 (324)
T cd05589 155 -GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE--------EEVFDSIVNDE-V------ 218 (324)
T ss_pred -CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCC-C------
Confidence 1223345689999999999999999999999999999999999999974321 12222222211 1
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRP-----SVKQVLI 1046 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RP-----s~~eil~ 1046 (1052)
..+...+..+.+++.+|++.||++|| ++.++++
T Consensus 219 ----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 219 ----RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ----CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 11222344588999999999999999 4666654
No 116
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=9e-35 Score=331.46 Aligned_cols=251 Identities=24% Similarity=0.339 Sum_probs=204.3
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||+||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36899999999999999999665 68999999986542 233567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++++|.+++... ..+++..+..++.|++.|++|||+. ||+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999876 5689999999999999999999998 99999999999999999999999999998664332
Q ss_pred ----------------------------cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc
Q 001562 931 ----------------------------THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFS 982 (1052)
Q Consensus 931 ----------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~ 982 (1052)
........|++.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 1122345689999999999999999999999999999999999999974321
Q ss_pred cCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 001562 983 EYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPS-VKQVLI 1046 (1052)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs-~~eil~ 1046 (1052)
.+....+....... . .+. ....+..+.+++.+|++ ||++||+ ++|+++
T Consensus 236 --------~~~~~~i~~~~~~~-~-~p~-----~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 236 --------QETYNKIINWKESL-R-FPP-----DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred --------HHHHHHHhccCCcc-c-CCC-----CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 12222222110000 0 000 11134558899999997 9999999 999986
No 117
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-35 Score=306.14 Aligned_cols=257 Identities=26% Similarity=0.355 Sum_probs=195.3
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCC-----eEEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA-----EMFLV 849 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lv 849 (1052)
+|+-.+++|.|+||.||+|... +++.||||++-.... --.+|+++|+++.|||||++..+|.... ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4667799999999999999665 468999998854332 2246999999999999999999987432 23589
Q ss_pred EeecCCCCHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC-CcEEEEeccccccc
Q 001562 850 YNFLSGGNLETFIHKK--SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE-LNAYLSDFGLARLL 926 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~-~~~kl~Dfgla~~~ 926 (1052)
||||+ -+|.++++.. .+..++.-.+.-+..||.+|++|||+. +|+||||||+|+|+|.+ |.+||||||.|+..
T Consensus 101 leymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 99996 4999998753 245688888889999999999999998 99999999999999976 88999999999988
Q ss_pred cccccccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhC----
Q 001562 927 EVSETHATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEG---- 1001 (1052)
Q Consensus 927 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---- 1001 (1052)
..++.. ..+..|..|.|||.+.+. .|+.+.||||.||++.||+-|++-|.+.. ...++++.++..-...
T Consensus 177 ~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s----~~dQL~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 177 VKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS----SVDQLVEIIKVLGTPTREDI 250 (364)
T ss_pred ccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC----HHHHHHHHHHHhCCCCHHHH
Confidence 655444 445678899999998875 58899999999999999999998886422 2233333332221110
Q ss_pred ---Ccc--c----cccchhhcC-CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1002 ---RSS--E----LFLPELWEA-GPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1002 ---~~~--~----~~~~~l~~~-~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
... + .+.+..|.. .......+..+++.+++.++|.+|.++.|+++
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 000 0 111111111 22344556899999999999999999999875
No 118
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=4.7e-34 Score=314.60 Aligned_cols=255 Identities=23% Similarity=0.398 Sum_probs=205.8
Q ss_pred CCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
.+|++.+.||+|+||.||+|... ++..+|+|.+..........+.+|++++++++|+||+++++++.+....++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 46788899999999999999532 356899998877666667789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhccC-------------CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcE
Q 001562 849 VYNFLSGGNLETFIHKKSG-------------KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNA 915 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~ 915 (1052)
+|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 9999999999999976531 3478999999999999999999999 99999999999999999999
Q ss_pred EEEecccccccccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHH
Q 001562 916 YLSDFGLARLLEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSW 993 (1052)
Q Consensus 916 kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 993 (1052)
+|+|||++........ .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||..... .+.
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~ 233 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN--------TEA 233 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH--------HHH
Confidence 9999999975543221 11222345678999999999999999999999999999998 8888863211 111
Q ss_pred HHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 994 AKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
.... ..+... ..+...+..+.+++.+||+.||++||+++|+++.|++
T Consensus 234 ~~~~-~~~~~~---------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 234 IECI-TQGREL---------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHH-HcCccC---------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1111 111111 1112234458899999999999999999999999864
No 119
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.9e-34 Score=329.07 Aligned_cols=255 Identities=20% Similarity=0.302 Sum_probs=201.0
Q ss_pred HhhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEE
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 847 (1052)
...++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.++...|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34568999999999999999999765 57899999986422 223456788999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+||||+++|+|.+++... .+++..+..++.||+.|++|||++ +|+||||||+||++++++.+||+|||++....
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 999999999999999754 478899999999999999999999 99999999999999999999999999998764
Q ss_pred ccccccccCccccccccccccccCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCc
Q 001562 928 VSETHATTDVAGTFGYVAPEYATTCR----VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRS 1003 (1052)
Q Consensus 928 ~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
...........||+.|+|||++.+.. ++.++||||+||++|||++|+.||.... ..............
T Consensus 194 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~--------~~~~~~~i~~~~~~ 265 (370)
T cd05621 194 ETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS--------LVGTYSKIMDHKNS 265 (370)
T ss_pred cCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCcc
Confidence 33332334567999999999987643 6789999999999999999999997432 11222222221111
Q ss_pred cccccchhhcCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 001562 1004 SELFLPELWEAGPQENLLGMMRLASTCTVETLST--RPSVKQVLIK 1047 (1052)
Q Consensus 1004 ~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~--RPs~~eil~~ 1047 (1052)
.. + .........+.+++..|+..++.+ |+++.|+++.
T Consensus 266 ~~-~------p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 266 LN-F------PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred cC-C------CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 10 0 011123445788999999865544 8899998763
No 120
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=6.2e-34 Score=311.46 Aligned_cols=258 Identities=28% Similarity=0.423 Sum_probs=210.2
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||.||+|... +|+.||+|.++... ....+++.+|++++++++|++++++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57999999999999999999776 78999999886432 233567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 851 NFLSGGNLETFIHKK--SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
||+++++|.+++... ....++++++..++.+++.|++|||+. +|+||||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998653 234588999999999999999999999 999999999999999999999999999876543
Q ss_pred cccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.. .......+++.|+|||.+.+..++.++||||+|+++|||++|+.||.... .+..+....... +...
T Consensus 159 ~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~-~~~~---- 226 (267)
T cd08224 159 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLYSLCKKIEK-CDYP---- 226 (267)
T ss_pred CC-cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC------ccHHHHHhhhhc-CCCC----
Confidence 22 11223457889999999999889999999999999999999999986432 122222222111 1111
Q ss_pred chhhcCCC-HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 001562 1009 PELWEAGP-QENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQLK 1052 (1052)
Q Consensus 1009 ~~l~~~~~-~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ik 1052 (1052)
..+ ...+..+.+++.+||+.+|++||++.++++++++++
T Consensus 227 -----~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 227 -----PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -----CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 111 134456889999999999999999999999999874
No 121
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.4e-34 Score=309.60 Aligned_cols=250 Identities=24% Similarity=0.393 Sum_probs=205.4
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
+|++.+.||+|+||.||++... ++..+|+|.+.... ....+.+.+|+.+++.++|+|++++++++.+++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4788999999999999999654 68899999886432 334567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++++|.+++....+..++++.+..++.|++.|+.|||+. +|+|+||||+||++++++.++++|||.+....... ..
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~ 156 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-AY 156 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc-cc
Confidence 999999999776556789999999999999999999999 99999999999999999999999999997654222 12
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhc
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWE 1013 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1013 (1052)
.....+++.|+|||++.+..++.++|+||+|+++|+|++|+.||.... ......... .+...
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~~--------- 218 (255)
T cd08219 157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS--------WKNLILKVC-QGSYK--------- 218 (255)
T ss_pred cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC--------HHHHHHHHh-cCCCC---------
Confidence 233568889999999999889999999999999999999999997321 112222221 12111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1014 AGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1014 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
..+......+.+++.+||+.||++||++.|++..
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1122234458899999999999999999999864
No 122
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=6.2e-34 Score=326.29 Aligned_cols=262 Identities=22% Similarity=0.338 Sum_probs=206.5
Q ss_pred HHHhhCCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCch-hhHHHHHHHHHHhccCC-cCceeeEEEEEe
Q 001562 770 VVRATGNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIR-HKNLVTLIGYYV 841 (1052)
Q Consensus 770 ~~~~~~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 841 (1052)
.....++|.+.+.||+|+||.||+|.+. .+..||+|++..... ...+.+..|++++.++. ||||+++++++.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 4445567888999999999999999753 246899999975432 23457889999999997 999999999999
Q ss_pred cCCeEEEEEeecCCCCHHHHHhhccC------------------------------------------------------
Q 001562 842 GEAEMFLVYNFLSGGNLETFIHKKSG------------------------------------------------------ 867 (1052)
Q Consensus 842 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------ 867 (1052)
..+..++|+||+++|+|.++++....
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 99999999999999999999975421
Q ss_pred ------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 001562 868 ------------------------------------------KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPS 905 (1052)
Q Consensus 868 ------------------------------------------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~ 905 (1052)
..+++..+.+++.|++.|++|||+. +|+||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcc
Confidence 2356778899999999999999998 9999999999
Q ss_pred CEEECCCCcEEEEecccccccccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCccc
Q 001562 906 NILLDEELNAYLSDFGLARLLEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSE 983 (1052)
Q Consensus 906 Nill~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~ 983 (1052)
||++++++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~- 347 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM- 347 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc-
Confidence 99999999999999999986532211 11223456789999999998889999999999999999998 8888753211
Q ss_pred CCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 984 YGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+........+... ..+......+.+++.+||+.+|++||+++|+++.|+++
T Consensus 348 -------~~~~~~~~~~~~~~---------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 348 -------NEQFYNAIKRGYRM---------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred -------hHHHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11111222222111 11222345689999999999999999999999999875
No 123
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=7e-34 Score=308.92 Aligned_cols=249 Identities=27% Similarity=0.442 Sum_probs=202.6
Q ss_pred CCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEe-cCCeEEEEEeec
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYV-GEAEMFLVYNFL 853 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~ 853 (1052)
.+|++.+.||+|+||.||+|... |..||+|.++... ..+.+.+|+.++++++|+|++++++++. .+...++|+||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46889999999999999999765 7889999886433 3467889999999999999999999764 456789999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++++|.+++.......+++..+..++.|++.|++|||++ +|+||||||+||++++++.+|++|||++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 999999999876655689999999999999999999999 99999999999999999999999999987543221
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
....++..|+|||++.+..++.++||||||+++|||++ |+.||... ...+..... ..+... .
T Consensus 157 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~--------~~~~~~~~~-~~~~~~-----~-- 219 (256)
T cd05082 157 -DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--------PLKDVVPRV-EKGYKM-----D-- 219 (256)
T ss_pred -CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHH-hcCCCC-----C--
Confidence 22334568999999999889999999999999999998 88887522 112222222 111111 1
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+...+..+.+++.+|++.+|++|||+.++++.|+++
T Consensus 220 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 220 --APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred --CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 1223345688999999999999999999999999875
No 124
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.6e-34 Score=317.96 Aligned_cols=259 Identities=27% Similarity=0.443 Sum_probs=207.2
Q ss_pred HhhCCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCc-hhhHHHHHHHHHHhccC-CcCceeeEEEEEecC
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGE 843 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 843 (1052)
...++|++.+.||+|+||.||+|... ....+|+|.+.... .+...++.+|+++++++ +|+||+++++++..+
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 34567899999999999999999764 23679999887542 23446688999999999 799999999999999
Q ss_pred CeEEEEEeecCCCCHHHHHhhc--------------cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE
Q 001562 844 AEMFLVYNFLSGGNLETFIHKK--------------SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILL 909 (1052)
Q Consensus 844 ~~~~lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill 909 (1052)
+..+++|||+++|+|.++++.. ....+++..+.+++.|++.|++|||+. +|+||||||+||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEE
Confidence 9999999999999999999753 235689999999999999999999999 99999999999999
Q ss_pred CCCCcEEEEeccccccccccccc-cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCC
Q 001562 910 DEELNAYLSDFGLARLLEVSETH-ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNG 987 (1052)
Q Consensus 910 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~ 987 (1052)
++++.+||+|||+++........ ......++..|+|||++.+..++.++|||||||++||+++ |..||....
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------ 239 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------ 239 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC------
Confidence 99999999999999866533221 1222335678999999998889999999999999999998 888876321
Q ss_pred cchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 988 FNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+..+. ...+... ..+..+...+.+++.+|++.+|++|||+.|+++.|+++
T Consensus 240 --~~~~~~~-~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 240 --VEELFKL-LKEGYRM---------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred --HHHHHHH-HHcCCcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 1111121 1111111 11223345688999999999999999999999999875
No 125
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-34 Score=318.71 Aligned_cols=251 Identities=27% Similarity=0.362 Sum_probs=212.3
Q ss_pred hhCCCcccceeeecCceEEEEEEecC-CeEEEEEEeccCchh---hHHHHHHHHHHhccCC-cCceeeEEEEEecCCeEE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELVP-GYLVAVKKLSIGRFQ---GIQQFDAEIGTLGRIR-HKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 847 (1052)
....|++.+.||+|.||.||++..+. |+.+|+|.+.+.... ..+.+.+|+++|+++. |||||.++++|++...++
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 34578999999999999999997664 999999999765543 3468899999999998 999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC----CcEEEEecccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE----LNAYLSDFGLA 923 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~----~~~kl~Dfgla 923 (1052)
+|||++.||.|.+.+... .+++.++..++.|+++++.|||+. ||+|||+||+|+++... +.+|++|||++
T Consensus 113 lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 999999999999999876 399999999999999999999998 99999999999999644 47999999999
Q ss_pred ccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCc
Q 001562 924 RLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRS 1003 (1052)
Q Consensus 924 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
..... .......+||+.|+|||++....|+..+||||+||++|.|++|.+||...... .... .+..+..
T Consensus 187 ~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~--------~~~~-~i~~~~~ 255 (382)
T KOG0032|consen 187 KFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF--------EIFL-AILRGDF 255 (382)
T ss_pred eEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh--------HHHH-HHHcCCC
Confidence 98765 44556678999999999999999999999999999999999999999854332 1111 2222222
Q ss_pred cccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1004 SELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1004 ~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+....|... ...+.++++.|+..||.+|+|+.++++
T Consensus 256 --~f~~~~w~~i----s~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 256 --DFTSEPWDDI----SESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred --CCCCCCcccc----CHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 2333444433 445889999999999999999999986
No 126
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.6e-34 Score=326.20 Aligned_cols=248 Identities=29% Similarity=0.425 Sum_probs=194.2
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
++|+..+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 45777889999999999999764 689999999865432 3346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+. ...++..+..++.||+.|++|||+. +|+||||||+||++++++.+||+|||+++...... .
T Consensus 154 ~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~ 223 (353)
T PLN00034 154 MDGGSLEGT------HIADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-D 223 (353)
T ss_pred CCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc-c
Confidence 999998653 2356778889999999999999999 99999999999999999999999999998664321 1
Q ss_pred cccCccccccccccccccC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc
Q 001562 933 ATTDVAGTFGYVAPEYATT-----CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF 1007 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~-----~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
......|+..|+|||.+.. ...+.++|||||||++|||++|+.||..... . +|............
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~-----~---~~~~~~~~~~~~~~-- 293 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ-----G---DWASLMCAICMSQP-- 293 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-----c---cHHHHHHHHhccCC--
Confidence 2234578999999998753 2334689999999999999999999973211 1 12111111110000
Q ss_pred cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1008 LPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1008 ~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
+ ..+......+.+++.+||+.||++||++.|+++.
T Consensus 294 -~----~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 294 -P----EAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred -C----CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 1122334568999999999999999999999863
No 127
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=6.6e-34 Score=314.76 Aligned_cols=258 Identities=21% Similarity=0.334 Sum_probs=204.0
Q ss_pred HhhCCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCC
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA 844 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 844 (1052)
...++|++.+.||+|+||.||+|..+ .+..||+|.+.... ......+.+|+.++++++||||+++++++.+..
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 35678999999999999999999543 24579999876443 223456788999999999999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhcc--------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEE
Q 001562 845 EMFLVYNFLSGGNLETFIHKKS--------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAY 916 (1052)
Q Consensus 845 ~~~lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~k 916 (1052)
..++||||+++|+|.++++... ....++..+.+++.|++.|+.|||++ +|+||||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEE
Confidence 9999999999999999997642 12346778899999999999999999 999999999999999999999
Q ss_pred EEeccccccccccccc-cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHH
Q 001562 917 LSDFGLARLLEVSETH-ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWA 994 (1052)
Q Consensus 917 l~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 994 (1052)
++|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||.... ..++.
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~--------~~~~~ 231 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--------NEQVL 231 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHH
Confidence 9999999865432221 1122345678999999999899999999999999999999 677876321 12222
Q ss_pred HHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 995 KLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
+.....+... .+...+..+.+++.+|++.||++||++.|+++.+++
T Consensus 232 ~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 277 (288)
T cd05061 232 KFVMDGGYLD----------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 277 (288)
T ss_pred HHHHcCCCCC----------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 2222221111 112224569999999999999999999999999875
No 128
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=5.9e-34 Score=313.99 Aligned_cols=258 Identities=24% Similarity=0.354 Sum_probs=207.4
Q ss_pred hhCCCcccceeeecCceEEEEEEecC-----CeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEec-CCe
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELVP-----GYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVG-EAE 845 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 845 (1052)
..++|++.+.||+|+||.||+|.... +..|++|++.... ....+.+.+|+.++++++|+|++++++++.. ...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35679999999999999999997765 6889999886442 3345678899999999999999999998776 467
Q ss_pred EEEEEeecCCCCHHHHHhhccC------CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEe
Q 001562 846 MFLVYNFLSGGNLETFIHKKSG------KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSD 919 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~D 919 (1052)
.++++||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECC
Confidence 8999999999999999976532 4589999999999999999999999 999999999999999999999999
Q ss_pred cccccccccccccc-ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHH
Q 001562 920 FGLARLLEVSETHA-TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLL 997 (1052)
Q Consensus 920 fgla~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
||+++.+....... .....++..|+|||.+.+..++.++||||||+++||+++ |+.||....+ .++....
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~ 232 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--------FEMAAYL 232 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--------HHHHHHH
Confidence 99998664333221 122345678999999998889999999999999999999 9999864221 1222222
Q ss_pred HHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 998 IKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 998 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
. .+... ..+..++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 233 ~-~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 233 K-DGYRL---------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred H-cCCCC---------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1 11110 01122345689999999999999999999999999876
No 129
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.7e-34 Score=310.36 Aligned_cols=248 Identities=26% Similarity=0.371 Sum_probs=197.7
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCH
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNL 858 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 858 (1052)
+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46899999999999664 68899999876443 23356789999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc-cCc
Q 001562 859 ETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT-TDV 937 (1052)
Q Consensus 859 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~-~~~ 937 (1052)
.+++.... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++........... ...
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 81 LTFLRTEG-PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred HHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence 99997643 4688999999999999999999999 999999999999999999999999999875432211111 111
Q ss_pred cccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCC
Q 001562 938 AGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGP 1016 (1052)
Q Consensus 938 ~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1016 (1052)
..+..|+|||.+.+..++.++||||+|+++|||++ |..||...... . ........... ..+
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--------~-~~~~~~~~~~~---------~~~ 218 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--------Q-TREAIEQGVRL---------PCP 218 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--------H-HHHHHHcCCCC---------CCc
Confidence 23457999999999889999999999999999998 88887632111 1 11111111111 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 1017 QENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 1017 ~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
...+..+.+++.+|++.+|++||++.|+.++|++
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 219 ELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 2334568999999999999999999999999863
No 130
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.1e-33 Score=306.36 Aligned_cols=247 Identities=26% Similarity=0.384 Sum_probs=200.3
Q ss_pred ceeeecCceEEEEEEecCCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCHH
Q 001562 781 NLIGTGGFGSTYKAELVPGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNLE 859 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 859 (1052)
++||+|+||.||+|...++..||+|.+..... .....+.+|++++++++|||++++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 46899999999999888889999998865432 23456889999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccCccc
Q 001562 860 TFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTDVAG 939 (1052)
Q Consensus 860 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g 939 (1052)
+++.... ..+++..+..++.|++.|+.|+|+. +++||||+|+||++++++.++++|||++...............+
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 9997654 4678999999999999999999999 99999999999999999999999999997544322222222344
Q ss_pred cccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHH
Q 001562 940 TFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQE 1018 (1052)
Q Consensus 940 ~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1018 (1052)
+..|+|||++.+..++.++||||||+++||+++ |..||..... ..... ....+... ..+..
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~--------~~~~~-~~~~~~~~---------~~~~~ 218 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN--------QQARE-QVEKGYRM---------SCPQK 218 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH--------HHHHH-HHHcCCCC---------CCCCC
Confidence 678999999998889999999999999999998 8888863211 11111 12222111 11223
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 1019 NLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 1019 ~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
.+..+.+++.+|++.+|++||++.|+++.|.
T Consensus 219 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 219 CPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 3456999999999999999999999999875
No 131
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.4e-34 Score=328.70 Aligned_cols=251 Identities=22% Similarity=0.324 Sum_probs=195.9
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
.|++.+.||+|+||+||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 588899999999999999955 467899999986543 2334678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 99999999999765 4688999999999999999999999 999999999999999999999999999764311000
Q ss_pred ----------------------------------------------ccccCccccccccccccccCCCCCchhHHHHHHH
Q 001562 932 ----------------------------------------------HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGV 965 (1052)
Q Consensus 932 ----------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~ 965 (1052)
......+||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 0012346999999999999988999999999999
Q ss_pred HHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHH--cccCCCCCCCCHHH
Q 001562 966 VLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLAST--CTVETLSTRPSVKQ 1043 (1052)
Q Consensus 966 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~--cl~~dP~~RPs~~e 1043 (1052)
++|||++|+.||...... +............. .+ .......++.+++.+ |+..+|..||+++|
T Consensus 237 il~elltG~~Pf~~~~~~--------~~~~~i~~~~~~~~--~~-----~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPT--------ETQLKVINWENTLH--IP-----PQVKLSPEAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred HHHHHHhCCCCCcCCCHH--------HHHHHHHccccccC--CC-----CCCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence 999999999999743221 11111111111000 00 011123447788888 44556666999999
Q ss_pred HHH
Q 001562 1044 VLI 1046 (1052)
Q Consensus 1044 il~ 1046 (1052)
+++
T Consensus 302 ~l~ 304 (381)
T cd05626 302 IKA 304 (381)
T ss_pred Hhc
Confidence 975
No 132
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.2e-34 Score=329.82 Aligned_cols=251 Identities=25% Similarity=0.340 Sum_probs=199.8
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+++++.++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36899999999999999999664 58999999996532 233456788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++..+....
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 999999999999765 4689999999999999999999999 99999999999999999999999999987543211
Q ss_pred cc-------------------------------------cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhC
Q 001562 931 TH-------------------------------------ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISG 973 (1052)
Q Consensus 931 ~~-------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg 973 (1052)
.. .....+||+.|+|||++.+..++.++||||+||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 00 01124689999999999999999999999999999999999
Q ss_pred CCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 001562 974 KRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPS---VKQVLI 1046 (1052)
Q Consensus 974 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs---~~eil~ 1046 (1052)
..||..... .+..+......... .+ + ........+.+++.+|+. +|.+|++ ++|+++
T Consensus 236 ~~Pf~~~~~--------~~~~~~i~~~~~~~-~~-~-----~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 236 YPPFCSDNP--------QETYRKIINWKETL-QF-P-----DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCH--------HHHHHHHHcCCCcc-CC-C-----CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 999974321 12222222111100 00 0 011223457889999997 9999998 888765
No 133
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.9e-35 Score=287.37 Aligned_cols=252 Identities=27% Similarity=0.404 Sum_probs=205.1
Q ss_pred hhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchh--------hHHHHHHHHHHhccC-CcCceeeEEEEEec
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQ--------GIQQFDAEIGTLGRI-RHKNLVTLIGYYVG 842 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 842 (1052)
.-..|+-.+.+|+|..++|.++.+ .+|..+|+|++...... -.+.-..|+.+++++ .||+|+++.++|+.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 345678889999999999999854 46888999988543211 134456799999998 69999999999999
Q ss_pred CCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccc
Q 001562 843 EAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGL 922 (1052)
Q Consensus 843 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgl 922 (1052)
+..+++|+|.|+.|-|.||+... -.+++....+|+.|+.+|++|||.+ .|||||+||+|||++++.++||+|||+
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccce
Confidence 99999999999999999999876 5799999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCcccccccccccccc------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHH
Q 001562 923 ARLLEVSETHATTDVAGTFGYVAPEYAT------TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKL 996 (1052)
Q Consensus 923 a~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 996 (1052)
|+.+.+++ .....+|||+|.|||.+. ...|+...|+|++|||+|.++.|.+||.-. .. ..+-.
T Consensus 170 a~~l~~Ge--kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR--------kQ-mlMLR 238 (411)
T KOG0599|consen 170 ACQLEPGE--KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR--------KQ-MLMLR 238 (411)
T ss_pred eeccCCch--hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--------HH-HHHHH
Confidence 99886443 445678999999999885 245778899999999999999999999721 11 12333
Q ss_pred HHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 997 LIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 997 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+.+|+.. |...-|. +......+||.+|++.||.+|.|++|+++
T Consensus 239 ~ImeGkyq--F~speWa----dis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 239 MIMEGKYQ--FRSPEWA----DISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHhcccc--cCCcchh----hccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 44444433 2222232 33445889999999999999999999875
No 134
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.9e-34 Score=317.84 Aligned_cols=259 Identities=25% Similarity=0.426 Sum_probs=207.1
Q ss_pred HhhCCCcccceeeecCceEEEEEEec--------CCeEEEEEEeccCc-hhhHHHHHHHHHHhccC-CcCceeeEEEEEe
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAELV--------PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYV 841 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 841 (1052)
...++|++.+.||+|+||.||+|... ++..||+|.+.... ....+++.+|+.+++.+ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 34567889999999999999999642 24579999886432 34456789999999999 8999999999999
Q ss_pred cCCeEEEEEeecCCCCHHHHHhhcc--------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 001562 842 GEAEMFLVYNFLSGGNLETFIHKKS--------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNI 907 (1052)
Q Consensus 842 ~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Ni 907 (1052)
.....++||||+++|+|.+++.... ...+++.++..++.|+++|++|||+. +|+||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence 9999999999999999999997642 23578889999999999999999999 999999999999
Q ss_pred EECCCCcEEEEeccccccccccccc-cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCC
Q 001562 908 LLDEELNAYLSDFGLARLLEVSETH-ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYG 985 (1052)
Q Consensus 908 ll~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~ 985 (1052)
++++++.+||+|||.++........ ......+++.|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~----- 243 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI----- 243 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC-----
Confidence 9999999999999999866433222 1222345678999999999889999999999999999998 77777522
Q ss_pred CCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 986 NGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
...++.+.. ..+... ..+..++..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 244 ---~~~~~~~~~-~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~ 296 (304)
T cd05101 244 ---PVEELFKLL-KEGHRM---------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296 (304)
T ss_pred ---CHHHHHHHH-HcCCcC---------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence 122333322 222111 11223445688999999999999999999999999875
No 135
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=7.1e-34 Score=310.97 Aligned_cols=258 Identities=26% Similarity=0.403 Sum_probs=208.7
Q ss_pred CCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||.||+|.. .+++.+|||.+.... .....++.+|+++++.++|||++++++++.+++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688899999999999999975 478999999876432 233467889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 851 NFLSGGNLETFIHKK--SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
||+++++|.+++... ....+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999998743 234689999999999999999999999 999999999999999999999999999876543
Q ss_pred cccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
... ......++..|+|||.+.+..++.++||||||+++|||++|..||..... ...+..+.......
T Consensus 159 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~------ 225 (267)
T cd08229 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIEQCDY------ 225 (267)
T ss_pred CCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc------hHHHHhhhhhcCCC------
Confidence 221 22334678899999999998899999999999999999999999864321 11222222211110
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
+.. .+......+.+++.+||+.+|++|||+.++++.++++
T Consensus 226 ~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 226 PPL---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCC---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 111 1123455699999999999999999999999999876
No 136
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.2e-34 Score=320.13 Aligned_cols=238 Identities=25% Similarity=0.345 Sum_probs=189.9
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
++||+|+||.||+|... +++.||+|+++... ....+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999764 57889999986532 22334455666666654 899999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~ 154 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKAS 154 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Cccc
Confidence 9999999765 4689999999999999999999999 99999999999999999999999999997543222 2233
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||.+.+..++.++||||+||++|||++|+.||.... ..+....+.. .. + ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~-~~------~----~~ 215 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED--------EDELFDSILN-DR------P----HF 215 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHc-CC------C----CC
Confidence 4568999999999999899999999999999999999999997432 1122222211 11 1 11
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSVKQ 1043 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e 1043 (1052)
+......+.+++.+||+.||++||++.+
T Consensus 216 ~~~~~~~~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 216 PRWISKEAKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence 2223445789999999999999998753
No 137
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=9.8e-34 Score=310.97 Aligned_cols=254 Identities=23% Similarity=0.415 Sum_probs=202.1
Q ss_pred CcccceeeecCceEEEEEEecC----CeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCe-----
Q 001562 777 FSIRNLIGTGGFGSTYKAELVP----GYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAE----- 845 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~~----~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 845 (1052)
|++.+.||+|+||.||+|.... +..||+|+++... ......+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678999999999999996642 3679999987543 2335678999999999999999999998876544
Q ss_pred -EEEEEeecCCCCHHHHHhhcc----CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEec
Q 001562 846 -MFLVYNFLSGGNLETFIHKKS----GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDF 920 (1052)
Q Consensus 846 -~~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Df 920 (1052)
.++++||+++|+|..++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 799999999999999986542 23689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccccccccc-ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHH
Q 001562 921 GLARLLEVSETHA-TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLI 998 (1052)
Q Consensus 921 gla~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
|+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||..... .+..+...
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--------~~~~~~~~ 229 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--------HEIYDYLR 229 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHH
Confidence 9998665333222 122334678999999998889999999999999999999 7788753211 12222222
Q ss_pred HhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 999 KEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 999 ~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
. +... ..+..++..+.+++.+||+.||++||++.|+++.|+++
T Consensus 230 ~-~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 H-GNRL---------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred c-CCCC---------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1 1111 11233455699999999999999999999999999875
No 138
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=6.1e-34 Score=325.41 Aligned_cols=252 Identities=24% Similarity=0.337 Sum_probs=195.7
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||+||+|... +++.||+|++.... ......+.+|+.++++++|++|+++++++.+....|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46899999999999999999654 58899999986532 223456788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 999999999999765 4689999999999999999999999 99999999999999999999999999987543211
Q ss_pred c----------------------------------ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCC
Q 001562 931 T----------------------------------HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRS 976 (1052)
Q Consensus 931 ~----------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p 976 (1052)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 0 001234799999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHccc--CCCCCCCCHHHHHH
Q 001562 977 LDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTV--ETLSTRPSVKQVLI 1046 (1052)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~--~dP~~RPs~~eil~ 1046 (1052)
|..... .+..+.+.... ....+.+. ......+.+++.+++. .++..||+++|+++
T Consensus 236 f~~~~~--------~~~~~~i~~~~-~~~~~p~~------~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 236 FCSETP--------QETYKKVMNWK-ETLIFPPE------VPISEKAKDLILRFCCEWEHRIGAPGVEEIKT 292 (363)
T ss_pred CCCCCH--------HHHHHHHHcCc-CcccCCCc------CCCCHHHHHHHHHHcCChhhcCCCCCHHHHhC
Confidence 974321 12222222111 11111110 0122346677777544 23345689999876
No 139
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.9e-34 Score=314.46 Aligned_cols=255 Identities=24% Similarity=0.351 Sum_probs=204.1
Q ss_pred CCcccceeeecCceEEEEEEec------CCeEEEEEEeccCchh-hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGRFQ-GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
+|++.+.||+|+||.||+|... .+..||+|++...... ..+.+.+|+.+++.++||||+++++++.+....++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4778899999999999999653 2478999998755433 24678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcc--------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCc
Q 001562 849 VYNFLSGGNLETFIHKKS--------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELN 914 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~ 914 (1052)
++||+++++|.+++.... ...+++..+.+++.|++.|++|+|++ +|+||||||.||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 999999999999985321 13478888999999999999999999 9999999999999999999
Q ss_pred EEEEecccccccccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHH
Q 001562 915 AYLSDFGLARLLEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVS 992 (1052)
Q Consensus 915 ~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 992 (1052)
+||+|||+++....... .......+++.|+|||.+.+..++.++||||+|+++|||++ |..||.... ..+
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--------~~~ 234 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--------NQD 234 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC--------HHH
Confidence 99999999886543222 12233456789999999988889999999999999999998 777776321 122
Q ss_pred HHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 993 WAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
+...+.. +... ..+..++..+.+++.+||+.+|++||+++++++.|+.+
T Consensus 235 ~~~~i~~-~~~~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~ 283 (283)
T cd05091 235 VIEMIRN-RQVL---------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRTW 283 (283)
T ss_pred HHHHHHc-CCcC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhCC
Confidence 2222222 2111 11233455589999999999999999999999999753
No 140
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.3e-34 Score=321.54 Aligned_cols=236 Identities=25% Similarity=0.356 Sum_probs=191.4
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
+.||+|+||.||+|... +++.||+|++.... ....+.+..|..++... +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999765 57899999986432 23345677888888776 699999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++...... .....
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~-~~~~~ 154 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN-GKTTS 154 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC-CCccc
Confidence 9999998765 4689999999999999999999999 9999999999999999999999999998754221 12233
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||.+.+..++.++||||+||++|||++|+.||.... ..+..+.... +... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~--------~~~~~~~i~~-~~~~----------~ 215 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN--------EDDLFEAILN-DEVV----------Y 215 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC--------HHHHHHHHhc-CCCC----------C
Confidence 4568999999999999899999999999999999999999997432 1222222221 1110 1
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSV 1041 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~ 1041 (1052)
+......+.+++.+|++.||++||++
T Consensus 216 ~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 216 PTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 12233458899999999999999998
No 141
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=8.1e-34 Score=312.21 Aligned_cols=257 Identities=25% Similarity=0.373 Sum_probs=204.1
Q ss_pred hhCCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCe
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAE 845 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 845 (1052)
..++|++.+.||+|+||.||+|.+. .+..||+|.+.... ......+..|+.++++++|+||+++++++.+...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3467899999999999999999765 35789999876443 2334678999999999999999999999999899
Q ss_pred EEEEEeecCCCCHHHHHhhccC-----CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC---cEEE
Q 001562 846 MFLVYNFLSGGNLETFIHKKSG-----KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL---NAYL 917 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~---~~kl 917 (1052)
.++||||+++++|.++++.... ..+++..+.+++.||+.|++|||++ +++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999976531 2588999999999999999999999 999999999999998754 5999
Q ss_pred Eeccccccccccccc-cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHH
Q 001562 918 SDFGLARLLEVSETH-ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAK 995 (1052)
Q Consensus 918 ~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 995 (1052)
+|||+++........ .......+..|+|||++.+..++.++|||||||++|||++ |..||..... .+..+
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~--------~~~~~ 232 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN--------QEVME 232 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHH
Confidence 999999866322221 1112234568999999999899999999999999999997 8888863221 12222
Q ss_pred HHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 996 LLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
........ ..+...+..+.+++.+|++.+|++||++.++++.|.+
T Consensus 233 ~~~~~~~~----------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 233 FVTGGGRL----------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHHcCCcC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 22221111 1122334568999999999999999999999998863
No 142
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=9.3e-34 Score=311.97 Aligned_cols=254 Identities=23% Similarity=0.367 Sum_probs=200.5
Q ss_pred CCCcccceeeecCceEEEEEEec-CCe----EEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGY----LVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
++|++.+.||+|+||+||+|.+. +++ .+++|.+..... ....++..|+..++++.||||+++++++. ....++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 46888999999999999999764 343 477887754322 23456788888999999999999999886 456788
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
++||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +++||||||+||++++++.+||+|||.++....
T Consensus 86 i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 999999999999997654 5689999999999999999999999 999999999999999999999999999986543
Q ss_pred ccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 929 SET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 929 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
... .......++..|+|||.+.+..++.++||||||+++||+++ |+.||...... . .......+....
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--------~-~~~~~~~~~~~~- 231 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--------E-VPDLLEKGERLA- 231 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------H-HHHHHHCCCcCC-
Confidence 322 12233456778999999998899999999999999999998 99888643211 1 122222222111
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
. +..+...+.+++.+||..+|++||++.|+++.|.++
T Consensus 232 -~-------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 232 -Q-------PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred -C-------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 1 111234578899999999999999999999998765
No 143
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.8e-34 Score=324.80 Aligned_cols=241 Identities=22% Similarity=0.294 Sum_probs=195.0
Q ss_pred ceeeecCceEEEEEEe-cCCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCC
Q 001562 781 NLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGG 856 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 856 (1052)
+.||+|+||.||+|.. .+|+.||+|++.... ......+..|+++++.++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999965 468999999986532 233456788999999999999999999999999999999999999
Q ss_pred CHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 857 NLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHY-SCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 857 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
+|.+++... ..+++..+..++.|++.|++|||+ . +|+||||||+||++++++.+||+|||+++..... .....
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~~ 154 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMK 154 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCC-Ccccc
Confidence 999988764 468999999999999999999997 6 9999999999999999999999999998753221 12223
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||++.+..++.++||||+||++|||++|+.||..... .+..+.... ... . .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~--------~~~~~~i~~-~~~------~----~ 215 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILM-EEI------R----F 215 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH--------HHHHHHHhc-CCC------C----C
Confidence 35689999999999999999999999999999999999999964221 122222111 110 1 1
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRP-----SVKQVLI 1046 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RP-----s~~eil~ 1046 (1052)
+......+.+++.+|++.||++|+ ++.++++
T Consensus 216 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 216 PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 122334588999999999999997 8988875
No 144
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.4e-34 Score=321.55 Aligned_cols=196 Identities=27% Similarity=0.429 Sum_probs=172.9
Q ss_pred CCcccceeeecCceEEEEE-EecCCeEEEEEEeccCchhhHHHHHHHHHHhccCC-c-----CceeeEEEEEecCCeEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIR-H-----KNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~l 848 (1052)
+|++.++||+|.||.|.+| +..+++.||||+++..... ..+...|+.+|..++ | -|+|+++++|...++.|+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f-~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF-LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHH-HHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 7899999999999999999 6667999999999755433 466678999999996 4 389999999999999999
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC--cEEEEeccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL--NAYLSDFGLARLL 926 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~--~~kl~Dfgla~~~ 926 (1052)
|+|.+ .-+|+++++......++...+..|+.||+.||..||+. +|||+||||+|||+.+.+ .+||+|||.|+..
T Consensus 266 VfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999 67999999999888999999999999999999999999 999999999999997543 6999999999865
Q ss_pred cccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 001562 927 EVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPS 980 (1052)
Q Consensus 927 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~ 980 (1052)
..... .++-+..|.|||++.|.+|+.+.||||||||++||++|.+.|.++
T Consensus 342 ~q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 342 SQRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred CCcce----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 43222 456778899999999999999999999999999999997766543
No 145
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7.7e-34 Score=312.16 Aligned_cols=247 Identities=24% Similarity=0.333 Sum_probs=195.3
Q ss_pred eeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCH
Q 001562 783 IGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNL 858 (1052)
Q Consensus 783 Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 858 (1052)
||+|+||.||+++.. +|+.||+|++..... .....+..|++++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999664 589999999864322 1234456799999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccCcc
Q 001562 859 ETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTDVA 938 (1052)
Q Consensus 859 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 938 (1052)
.+++.......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~ 155 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQRA 155 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeeccC
Confidence 9998776556789999999999999999999999 99999999999999999999999999997654322 222346
Q ss_pred ccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHH
Q 001562 939 GTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQE 1018 (1052)
Q Consensus 939 g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1018 (1052)
|+..|+|||++.+..++.++||||+||++|||++|+.||...... ....++.+.... .... . ....
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~----~~~~~~~~~~~~-~~~~-----~----~~~~ 221 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK----VAKEELKRRTLE-DEVK-----F----EHQN 221 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch----hhHHHHHHHhhc-cccc-----c----cccc
Confidence 889999999999988999999999999999999999998643221 111111111111 1000 0 0112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001562 1019 NLLGMMRLASTCTVETLSTRPSVKQVLIKL 1048 (1052)
Q Consensus 1019 ~~~~l~~Li~~cl~~dP~~RPs~~eil~~L 1048 (1052)
...++.+++.+||+.||++||+++|+++..
T Consensus 222 ~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 222 FTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred CCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 344588999999999999999997766443
No 146
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.2e-33 Score=310.15 Aligned_cols=254 Identities=24% Similarity=0.411 Sum_probs=199.1
Q ss_pred CcccceeeecCceEEEEEEecCC---eEEEEEEeccC--chhhHHHHHHHHHHhccCCcCceeeEEEEEecC------Ce
Q 001562 777 FSIRNLIGTGGFGSTYKAELVPG---YLVAVKKLSIG--RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE------AE 845 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~~~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 845 (1052)
|.+.++||+|+||.||+|..... ..||+|.++.. .....+.+..|+++++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 35678999999999999976543 36899988654 234457788999999999999999999987532 24
Q ss_pred EEEEEeecCCCCHHHHHhhcc----CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecc
Q 001562 846 MFLVYNFLSGGNLETFIHKKS----GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFG 921 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfg 921 (1052)
.++++||+++|+|.+++.... ...+++..+..++.|++.|++|||++ +|+||||||+||++++++.++|+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 689999999999999885322 24578999999999999999999998 99999999999999999999999999
Q ss_pred cccccccccccc-ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHH
Q 001562 922 LARLLEVSETHA-TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIK 999 (1052)
Q Consensus 922 la~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
+++......... .....+++.|+|||...+..++.++||||||+++|||++ |+.||.... ..+..+. ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~~~~~~~-~~ 228 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE--------NSEIYDY-LR 228 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHH-HH
Confidence 998764332211 122345678999999999999999999999999999999 778875321 1122222 22
Q ss_pred hCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1000 EGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1000 ~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+.... .+...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 229 ~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 229 QGNRLK---------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred cCCCCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 222111 1123345589999999999999999999999999875
No 147
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1e-33 Score=307.60 Aligned_cols=252 Identities=25% Similarity=0.447 Sum_probs=204.4
Q ss_pred CCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecC
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
.+|++.+.||+|+||.||+|.+..++.+|+|++..... ...++.+|++++++++||+++++++++......++|+||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 36888899999999999999887788999998865433 34678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT 934 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 934 (1052)
+++|.+++.... ..++++.+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++...........
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (256)
T cd05112 83 HGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS 158 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCccccc
Confidence 999999997654 4578999999999999999999999 999999999999999999999999999876543322222
Q ss_pred cCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhc
Q 001562 935 TDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWE 1013 (1052)
Q Consensus 935 ~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1013 (1052)
....++.+|+|||.+.+..++.++||||+|+++|||++ |+.||..... .+..+.. ..+. ....+
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~-~~~~--~~~~~---- 223 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--------SEVVETI-NAGF--RLYKP---- 223 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--------HHHHHHH-hCCC--CCCCC----
Confidence 23345678999999998889999999999999999998 8888863221 1222222 1111 11111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 1014 AGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 1014 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 224 ---~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 224 ---RLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ---CCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 112356899999999999999999999999873
No 148
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=8.7e-34 Score=315.23 Aligned_cols=254 Identities=25% Similarity=0.403 Sum_probs=200.7
Q ss_pred CCCcccceeeecCceEEEEEEecC-C--eEEEEEEeccC-chhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELVP-G--YLVAVKKLSIG-RFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~~-~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 849 (1052)
++|++.++||+|+||.||+|.... + ..+++|.++.. .....+.+..|+++++++ +||||+++++++.+....++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 578999999999999999996643 3 34788887643 333456788999999999 799999999999999999999
Q ss_pred EeecCCCCHHHHHhhcc--------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcE
Q 001562 850 YNFLSGGNLETFIHKKS--------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNA 915 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~ 915 (1052)
+||+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 99999999999997532 13478899999999999999999998 99999999999999999999
Q ss_pred EEEeccccccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHH
Q 001562 916 YLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWA 994 (1052)
Q Consensus 916 kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 994 (1052)
||+|||++...... ........+..|+|||.+.+..++.++|||||||++|||++ |..||..... .+..
T Consensus 159 kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~--------~~~~ 228 (297)
T cd05089 159 KIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC--------AELY 228 (297)
T ss_pred EECCcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HHHH
Confidence 99999998643211 11111223557999999998889999999999999999998 9999863221 1222
Q ss_pred HHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 995 KLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
... ..+.. + ..+...+..+.+++.+||+.+|.+||+++++++.|+++
T Consensus 229 ~~~-~~~~~-----~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 275 (297)
T cd05089 229 EKL-PQGYR-----M----EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM 275 (297)
T ss_pred HHH-hcCCC-----C----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 221 11111 0 11222345688999999999999999999999998764
No 149
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=5.2e-34 Score=316.78 Aligned_cols=263 Identities=20% Similarity=0.368 Sum_probs=202.0
Q ss_pred hCCCcccceeeecCceEEEEEEecC---------------CeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP---------------GYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLI 837 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~ 837 (1052)
..+|++.+.||+|+||.||+|.... ...||+|++.... ....+++.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3579999999999999999986532 2358999886542 23346789999999999999999999
Q ss_pred EEEecCCeEEEEEeecCCCCHHHHHhhcc----------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 001562 838 GYYVGEAEMFLVYNFLSGGNLETFIHKKS----------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNI 907 (1052)
Q Consensus 838 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Ni 907 (1052)
+++......++||||+++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 99999999999999999999999996532 12368889999999999999999999 999999999999
Q ss_pred EECCCCcEEEEecccccccccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCcccC
Q 001562 908 LLDEELNAYLSDFGLARLLEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS--GKRSLDPSFSEY 984 (1052)
Q Consensus 908 ll~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt--g~~p~~~~~~~~ 984 (1052)
++++++.+||+|||++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~- 239 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE- 239 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH-
Confidence 999999999999999976543222 12223345678999999998889999999999999999998 55566532111
Q ss_pred CCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 985 GNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
............... ......+...+..+.+++.+||+.+|++||+++++++.|++
T Consensus 240 ----~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 240 ----QVIENTGEFFRNQGR------QIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred ----HHHHHHHHhhhhccc------cccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 111111111111100 00011122234569999999999999999999999999874
No 150
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.7e-33 Score=307.30 Aligned_cols=251 Identities=25% Similarity=0.386 Sum_probs=202.5
Q ss_pred CCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCch-----hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRF-----QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
++|++.+.||+|++|.||+|.. .+++.||+|.+..... .....+.+|++++++++||||+++++++.++...++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4689999999999999999965 4689999998864321 224568889999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
|+||+++++|.+++... ..+++..+.+++.|++.|+.|||+. +|+||||+|+||++++++.++|+|||++.....
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 99999999999999765 4588999999999999999999999 999999999999999999999999999976543
Q ss_pred cccccc--cCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 929 SETHAT--TDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 929 ~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
...... ....++..|+|||.+.+..++.++||||+|+++|||++|+.||..... .+......... ..
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------~~~~~~~~~~~-~~-- 225 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA--------MAAIFKIATQP-TN-- 225 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch--------HHHHHHHhccC-CC--
Confidence 221111 234577899999999998899999999999999999999999863211 11111111111 11
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
+ ..+......+.+++.+||..+|++||++.|+++.
T Consensus 226 --~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 --P----QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred --C----CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 1 1222344568899999999999999999999864
No 151
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-35 Score=320.28 Aligned_cols=245 Identities=27% Similarity=0.405 Sum_probs=204.5
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCHH
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNLE 859 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 859 (1052)
-+||+|.||+||.|+.. +...+|||.+.....+..+...+|+..-++++|.|||+++|.+.+++.+-+.||-++||+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 37999999999999654 45679999998887777888999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCc--cHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEC-CCCcEEEEeccccccccccccccccC
Q 001562 860 TFIHKKSGKKI--QWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLD-EELNAYLSDFGLARLLEVSETHATTD 936 (1052)
Q Consensus 860 ~~l~~~~~~~l--~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~-~~~~~kl~Dfgla~~~~~~~~~~~~~ 936 (1052)
+.++... .++ .+.++-.+.+||++|+.|||+. .|||||||-+||+|. -.|.+||+|||.++.... -...+..
T Consensus 661 sLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-inP~TET 735 (1226)
T KOG4279|consen 661 SLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-INPCTET 735 (1226)
T ss_pred HHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc-CCccccc
Confidence 9998876 345 6778888999999999999999 999999999999995 678999999999987642 2334556
Q ss_pred ccccccccccccccCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcC
Q 001562 937 VAGTFGYVAPEYATTC--RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEA 1014 (1052)
Q Consensus 937 ~~g~~~y~aPE~~~~~--~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1014 (1052)
..||..|||||++..+ .|+.++|||||||++.||.||++||..-.++ +.+ .++-|-.. ..+.
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp--------qAA--MFkVGmyK------vHP~ 799 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP--------QAA--MFKVGMYK------VHPP 799 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh--------hHh--hhhhccee------cCCC
Confidence 7799999999999764 5889999999999999999999999844333 111 11111111 1234
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1015 GPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1015 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.|.+...+...+|.+|+.+||.+||++.++++
T Consensus 800 iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 800 IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 56777888999999999999999999999875
No 152
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.7e-34 Score=316.40 Aligned_cols=255 Identities=24% Similarity=0.379 Sum_probs=203.0
Q ss_pred CCcccceeeecCceEEEEEEec------CCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
+|++.+.||+|+||.||+|... ....+|+|.+..... ...+++..|+++++.++||||+++++.+..++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4788899999999999999643 235688888765432 335678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcc----------------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 001562 849 VYNFLSGGNLETFIHKKS----------------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSN 906 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~N 906 (1052)
++||+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 999999999999986531 13478899999999999999999999 99999999999
Q ss_pred EEECCCCcEEEEeccccccccccccc-cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccC
Q 001562 907 ILLDEELNAYLSDFGLARLLEVSETH-ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEY 984 (1052)
Q Consensus 907 ill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~ 984 (1052)
|++++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||....+
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-- 235 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-- 235 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH--
Confidence 99999999999999999865432221 1222345678999999998889999999999999999999 8888864221
Q ss_pred CCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 985 GNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+... ....+... ..+...+..+.+++.+|++.+|++||+++|+++.|+++
T Consensus 236 ------~~~~~-~~~~~~~~---------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 236 ------ERLFN-LLKTGYRM---------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred ------HHHHH-HHhCCCCC---------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 11111 12211111 11223345688999999999999999999999999875
No 153
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=5.7e-34 Score=320.57 Aligned_cols=241 Identities=23% Similarity=0.317 Sum_probs=193.8
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCc-CceeeEEEEEecCCeEEEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRH-KNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 850 (1052)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+..|.++++.++| ++|+++++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4888999999999999999655 57889999986532 2345667889999999976 46888999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG- 154 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC-
Confidence 999999999999765 4688999999999999999999999 9999999999999999999999999998743211
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
........|++.|+|||++.+..++.++||||+||++|||+||+.||..... .+..+.... ... .
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--------~~~~~~i~~-~~~------~ 219 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--------DELFQSIME-HNV------S 219 (324)
T ss_pred CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHc-CCC------C
Confidence 1122335689999999999999999999999999999999999999974321 122222211 111 1
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPSV 1041 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~ 1041 (1052)
.+......+.+++.+|++.||++|++.
T Consensus 220 ----~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 220 ----YPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ----CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 122233458899999999999999976
No 154
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.4e-33 Score=306.45 Aligned_cols=250 Identities=25% Similarity=0.408 Sum_probs=206.0
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccC--chhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIG--RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+|++.+.||+|++|.||+|... +++.|++|.+... .......+.+|++++++++|||++++++++.+++..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4778899999999999999764 5889999988643 334467788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.++++......+++..+.+++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~- 156 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN- 156 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccc-
Confidence 9999999999886556799999999999999999999999 999999999999999999999999999886653322
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
......+++.|+|||+..+..++.++|+||||+++|||++|+.||..... .+..+.. ..+...
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~-~~~~~~-------- 219 (256)
T cd08529 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--------GALILKI-IRGVFP-------- 219 (256)
T ss_pred hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHH-HcCCCC--------
Confidence 22334578899999999998899999999999999999999999974321 1111111 111111
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
..+...+..+.+++.+||+.+|++||++.++++.
T Consensus 220 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 -PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred -CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1122344568999999999999999999999863
No 155
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1e-33 Score=340.18 Aligned_cols=257 Identities=22% Similarity=0.285 Sum_probs=200.7
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.++||+|+||.||+|... +++.||+|++.... ....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999654 58999999986532 223467899999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcc---------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecc
Q 001562 851 NFLSGGNLETFIHKKS---------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFG 921 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfg 921 (1052)
||+++|+|.+++.... ....++..+.+++.||++|++|||++ +|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999987521 13356678899999999999999999 99999999999999999999999999
Q ss_pred cccccccccc-----------------ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccC
Q 001562 922 LARLLEVSET-----------------HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEY 984 (1052)
Q Consensus 922 la~~~~~~~~-----------------~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~ 984 (1052)
+++....... ......+||+.|+|||.+.+..++.++||||+||++|||+||+.||......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~- 237 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR- 237 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh-
Confidence 9986621110 1112346899999999999999999999999999999999999999642111
Q ss_pred CCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhc
Q 001562 985 GNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRP-SVKQVLIKLKQ 1050 (1052)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RP-s~~eil~~L~~ 1050 (1052)
... .. .... .+.-.. .....+..+.+++.+|++.||++|| +++++.+.|+.
T Consensus 238 -------ki~---~~-~~i~---~P~~~~-p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~ 289 (932)
T PRK13184 238 -------KIS---YR-DVIL---SPIEVA-PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEP 289 (932)
T ss_pred -------hhh---hh-hhcc---Chhhcc-ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 000 00 0000 000000 0012344588999999999999997 56667666654
No 156
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.1e-33 Score=309.47 Aligned_cols=255 Identities=27% Similarity=0.437 Sum_probs=205.0
Q ss_pred CCCcccceeeecCceEEEEEEec----CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV----PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
++|++.+.||+|+||.||+|... .+..+|+|.++... ....+.+..|+.++++++||||+++++++.+++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46889999999999999999653 23479999886543 23356789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
|||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||++......
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999997654 4689999999999999999999999 9999999999999999999999999999876533
Q ss_pred ccccc--cCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 930 ETHAT--TDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 930 ~~~~~--~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
..... ....++..|+|||.+.+..++.++|+||||+++||+++ |..||...... +..... ..+...
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~-~~~~~~-- 228 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--------DVIKAI-EEGYRL-- 228 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--------HHHHHH-hCCCcC--
Confidence 22111 12223568999999999889999999999999999887 99998632111 111111 111110
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+...+..+.+++.+|++.+|++||++.++++.|+++
T Consensus 229 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 -------PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -------CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 11222345688999999999999999999999999875
No 157
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.3e-33 Score=306.97 Aligned_cols=246 Identities=26% Similarity=0.394 Sum_probs=197.2
Q ss_pred eeeecCceEEEEEEec---CCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCC
Q 001562 782 LIGTGGFGSTYKAELV---PGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGG 856 (1052)
Q Consensus 782 ~Lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 856 (1052)
.||+|+||.||+|.++ ++..+|+|+++.... ...+++..|+.++++++||||+++++++. ....++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999653 578899998864432 23567889999999999999999999886 45678999999999
Q ss_pred CHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc--cc
Q 001562 857 NLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH--AT 934 (1052)
Q Consensus 857 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~--~~ 934 (1052)
+|.+++... ..++++.+..++.|++.|++|||++ +|+||||||.||+++.++.+||+|||++......... ..
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 81 PLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence 999999764 4689999999999999999999999 9999999999999999999999999999866433221 11
Q ss_pred cCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhc
Q 001562 935 TDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWE 1013 (1052)
Q Consensus 935 ~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1013 (1052)
....++..|+|||.+....++.++||||||+++|||++ |+.||..... .++.+.+ ..+...
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~i-~~~~~~--------- 217 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--------NEVTQMI-ESGERM--------- 217 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH-HCCCCC---------
Confidence 22234578999999988888999999999999999998 9999874211 1222222 222211
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1014 AGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1014 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+...+..+.+++.+||+.||++||++++|++.|++.
T Consensus 218 ~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 218 ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 11223345689999999999999999999999999864
No 158
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.8e-34 Score=300.55 Aligned_cols=253 Identities=26% Similarity=0.360 Sum_probs=208.4
Q ss_pred hCCCcccceeeecCceEEEEEEecC-CeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP-GYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
..+|++.+.||+|.-|+||+++.++ +..+|+|++.+... +...+...|.++|+.+.||.+..+|+.++.+...|+|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 3468888999999999999998764 58899999965432 3356778899999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
||||+||+|....+++.+..++++.+.-+|.+++-||+|||.. |||.||+||+||||.++|.+.|+||.++......
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999999999999999999999999999999999999 9999999999999999999999999998655210
Q ss_pred c---------------------------------c----------------------ccccCccccccccccccccCCCC
Q 001562 930 E---------------------------------T----------------------HATTDVAGTFGYVAPEYATTCRV 954 (1052)
Q Consensus 930 ~---------------------------------~----------------------~~~~~~~g~~~y~aPE~~~~~~~ 954 (1052)
. . ......+||-.|.|||++.|...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 01123478899999999999999
Q ss_pred CchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCC
Q 001562 955 SDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVET 1034 (1052)
Q Consensus 955 ~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~d 1034 (1052)
+.++|.|+|||++|||+.|+.||.+..... -...+..+. +.-...+..+....+||++.+..|
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~--------Tl~NIv~~~---------l~Fp~~~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKE--------TLRNIVGQP---------LKFPEEPEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchh--------hHHHHhcCC---------CcCCCCCcchhHHHHHHHHHhccC
Confidence 999999999999999999999998654331 122222111 110111245567899999999999
Q ss_pred CCCCCC----HHHHHH
Q 001562 1035 LSTRPS----VKQVLI 1046 (1052)
Q Consensus 1035 P~~RPs----~~eil~ 1046 (1052)
|.+|.. ++||.+
T Consensus 376 P~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKR 391 (459)
T ss_pred hhhhhccccchHHhhc
Confidence 999997 777654
No 159
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-33 Score=316.14 Aligned_cols=257 Identities=25% Similarity=0.431 Sum_probs=204.7
Q ss_pred hCCCcccceeeecCceEEEEEEec--------CCeEEEEEEeccCc-hhhHHHHHHHHHHhccC-CcCceeeEEEEEecC
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV--------PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGE 843 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 843 (1052)
.++|.+.+.||+|+||.||+|... .+..+|+|.+.... .....++..|+++++++ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 457999999999999999999653 23569999987543 33456788899999999 799999999999999
Q ss_pred CeEEEEEeecCCCCHHHHHhhcc--------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE
Q 001562 844 AEMFLVYNFLSGGNLETFIHKKS--------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILL 909 (1052)
Q Consensus 844 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill 909 (1052)
+..++||||+++|+|.+++.... ...+++.++.+++.|++.|++|||+. +++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEE
Confidence 99999999999999999997643 13478899999999999999999998 99999999999999
Q ss_pred CCCCcEEEEecccccccccccccc-ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCC
Q 001562 910 DEELNAYLSDFGLARLLEVSETHA-TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNG 987 (1052)
Q Consensus 910 ~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~ 987 (1052)
+.++.++|+|||.+.......... .....+++.|+|||.+.+..++.++||||+||++|||++ |+.||...
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~------- 246 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV------- 246 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-------
Confidence 999999999999997654322111 112234568999999999889999999999999999998 77887532
Q ss_pred cchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 988 FNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
...+..+. ...+... ..+......+.+++.+|++.+|++||++.|+++.|+++
T Consensus 247 -~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 247 -PVEELFKL-LKEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred -CHHHHHHH-HHcCCCC---------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 11222222 2222111 11223345688999999999999999999999999875
No 160
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.7e-33 Score=305.94 Aligned_cols=247 Identities=24% Similarity=0.383 Sum_probs=196.7
Q ss_pred eeeecCceEEEEEEec---CCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCC
Q 001562 782 LIGTGGFGSTYKAELV---PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGN 857 (1052)
Q Consensus 782 ~Lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 857 (1052)
.||+|+||.||+|.+. .+..||+|++..... ...+.+.+|+.++++++||||+++++++. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999654 356799998865533 23467889999999999999999999886 457899999999999
Q ss_pred HHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc--cc
Q 001562 858 LETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA--TT 935 (1052)
Q Consensus 858 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~--~~ 935 (1052)
|.+++.... ..+++..+.+++.|++.|++|||++ +++||||||+||+++.++.+||+|||++.......... ..
T Consensus 81 L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05115 81 LNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS 156 (257)
T ss_pred HHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence 999997543 5689999999999999999999999 99999999999999999999999999997554322211 11
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEA 1014 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1014 (1052)
...++..|+|||.+.+..++.++||||||+++||+++ |..||..... .++...+ ..+... .
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~-~~~~~~---------~ 218 (257)
T cd05115 157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG--------PEVMSFI-EQGKRL---------D 218 (257)
T ss_pred CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH--------HHHHHHH-HCCCCC---------C
Confidence 1233578999999988889999999999999999996 9999863221 1222222 222111 1
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1015 GPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1015 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+..++.++.+++.+||..+|++||++.++.+.|+.+
T Consensus 219 ~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 219 CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1233445688999999999999999999999999864
No 161
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-34 Score=305.71 Aligned_cols=248 Identities=23% Similarity=0.375 Sum_probs=209.3
Q ss_pred hCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchh--hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
.+-|.+.+.||+|.|++|-.|++ -+|++||||++.+.... ....+..|+++|+-++|||||++|++...+...|+|+
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 45688899999999999999954 57999999999766443 3467889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEC-CCCcEEEEecccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLD-EELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~-~~~~~kl~Dfgla~~~~~~ 929 (1052)
|.=++|+|.+|+-++. ..+.++...+++.||+.|+.|+|+. .+||||+||+||++- +-|-||++|||++-.+.++
T Consensus 97 ELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred EecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 9999999999998875 6799999999999999999999999 899999999999875 5688999999999887654
Q ss_pred ccccccCccccccccccccccCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 930 ETHATTDVAGTFGYVAPEYATTCRVS-DKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 930 ~~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.. ....+|+..|.|||++.|..|. ++.||||+|||+|-+.+|++||.......+ -..+.+.++
T Consensus 173 ~k--L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET---------LTmImDCKY----- 236 (864)
T KOG4717|consen 173 KK--LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET---------LTMIMDCKY----- 236 (864)
T ss_pred ch--hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh---------hhhhhcccc-----
Confidence 43 3445899999999999999886 678999999999999999999985433311 111222221
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..|.....+..+||..|+..||++|.+.+||+.
T Consensus 237 -----tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 237 -----TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred -----cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 235556677899999999999999999999874
No 162
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.8e-34 Score=325.51 Aligned_cols=259 Identities=19% Similarity=0.283 Sum_probs=203.1
Q ss_pred hhHHHhhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecC
Q 001562 768 DNVVRATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE 843 (1052)
Q Consensus 768 ~~~~~~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 843 (1052)
.++....++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 344455678999999999999999999765 57899999986422 22345678899999999999999999999999
Q ss_pred CeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccc
Q 001562 844 AEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLA 923 (1052)
Q Consensus 844 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla 923 (1052)
...++||||+++|+|.+++... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a 189 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTC 189 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCce
Confidence 9999999999999999999754 478889999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCccccccccccccccCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 001562 924 RLLEVSETHATTDVAGTFGYVAPEYATTCR----VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIK 999 (1052)
Q Consensus 924 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
...............||+.|+|||++.+.. ++.++||||+||++|||++|+.||.... .....+.+..
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--------~~~~~~~i~~ 261 (371)
T cd05622 190 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--------LVGTYSKIMN 261 (371)
T ss_pred eEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC--------HHHHHHHHHc
Confidence 876543333334567999999999987543 7789999999999999999999997422 1222222222
Q ss_pred hCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 001562 1000 EGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLST--RPSVKQVLIK 1047 (1052)
Q Consensus 1000 ~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~--RPs~~eil~~ 1047 (1052)
....... .........+.+++.+|+..++.+ ||++.|+++.
T Consensus 262 ~~~~~~~-------~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 262 HKNSLTF-------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCCcccC-------CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 1111110 111233455888999999844433 7789988763
No 163
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.5e-33 Score=313.06 Aligned_cols=250 Identities=24% Similarity=0.387 Sum_probs=205.2
Q ss_pred hCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
..+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+|++++++.+..+...++||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 34788999999999999999965 46889999999876666667889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++... .+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++....... .
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~-~ 171 (296)
T cd06654 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-S 171 (296)
T ss_pred cCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccccc-c
Confidence 9999999998653 478999999999999999999999 99999999999999999999999999987654222 1
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
......+++.|+|||.+.+..++.++|||||||++|||++|+.||....+. .............
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~-------- 235 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--------RALYLIATNGTPE-------- 235 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH--------HhHHHHhcCCCCC--------
Confidence 122346788999999999888899999999999999999999999743221 1111111111110
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...+......+.+++.+||..+|++||++.|+++
T Consensus 236 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 236 LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 0112334456889999999999999999999986
No 164
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.8e-34 Score=309.86 Aligned_cols=255 Identities=24% Similarity=0.371 Sum_probs=202.5
Q ss_pred hCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
.++|++.+.||+|+||.||+|.. .+++.||+|++..........+.+|+.++++++|||++++++++..+...++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 34799999999999999999975 46889999998766555556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.++++.. ..+++..+..++.|+++|+.|||+. +|+|||++|+||++++++.++|+|||++....... .
T Consensus 88 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-~ 161 (267)
T cd06646 88 CGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI-A 161 (267)
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecccc-c
Confidence 9999999998754 4689999999999999999999999 99999999999999999999999999998654221 1
Q ss_pred cccCcccccccccccccc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 933 ATTDVAGTFGYVAPEYAT---TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~---~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......++..|+|||.+. ...++.++||||+||++|||++|+.||....+... .... ...... .+
T Consensus 162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~--------~~~~-~~~~~~---~~ 229 (267)
T cd06646 162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--------LFLM-SKSNFQ---PP 229 (267)
T ss_pred ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh--------heee-ecCCCC---CC
Confidence 223346788999999884 34467899999999999999999999863321100 0000 000000 01
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKL 1048 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L 1048 (1052)
... .....+..+.+++.+||+.+|++||+++++++.+
T Consensus 230 ~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 230 KLK--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCc--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 110 1112345688999999999999999999998753
No 165
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4.5e-34 Score=320.94 Aligned_cols=241 Identities=23% Similarity=0.334 Sum_probs=194.1
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
++||+|+||.||+|+.. +++.||+|++.... ....+.+..|.+++..+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46899999999999765 57899999986532 23345677888888866 799999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++....... ....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~ 154 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VTTT 154 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC-cccc
Confidence 9999998765 4689999999999999999999999 99999999999999999999999999987543221 2233
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||++.+..++.++||||+||++|||++|+.||..... .+..+....... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~--------~~~~~~i~~~~~-----------~~ 215 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE--------DDLFESILHDDV-----------LY 215 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCC-----------CC
Confidence 45689999999999998999999999999999999999999974321 122222222111 01
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCC-------CHHHHHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRP-------SVKQVLI 1046 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RP-------s~~eil~ 1046 (1052)
+......+.+++.+|++.||++|| ++.++++
T Consensus 216 p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 216 PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 112234588999999999999999 7777764
No 166
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=9e-34 Score=330.47 Aligned_cols=257 Identities=23% Similarity=0.360 Sum_probs=192.5
Q ss_pred hhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecC--------
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE-------- 843 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 843 (1052)
..++|++.++||+|+||.||+|... +++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3457999999999999999999664 58899999885432 2345799999999999999999886432
Q ss_pred CeEEEEEeecCCCCHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC-cEEEEec
Q 001562 844 AEMFLVYNFLSGGNLETFIHKK--SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL-NAYLSDF 920 (1052)
Q Consensus 844 ~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~-~~kl~Df 920 (1052)
...++||||++ +++.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecc
Confidence 24679999996 5788777542 245689999999999999999999999 999999999999999665 6999999
Q ss_pred cccccccccccccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 001562 921 GLARLLEVSETHATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIK 999 (1052)
Q Consensus 921 gla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
|+|+...... ......|++.|+|||++.+. .++.++||||+||++|||++|++||...... ..+. +....
T Consensus 216 Gla~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~----~~~~---~i~~~ 286 (440)
T PTZ00036 216 GSAKNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV----DQLV---RIIQV 286 (440)
T ss_pred ccchhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHH---HHHHH
Confidence 9998654322 22335688999999998764 6899999999999999999999999743211 0111 11110
Q ss_pred hCCcc-----------------ccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1000 EGRSS-----------------ELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1000 ~~~~~-----------------~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+... ......+....+...+.++.+++.+||+.||++|||+.|+++
T Consensus 287 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 287 LGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred hCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 01000 000011111122233456899999999999999999999874
No 167
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1e-33 Score=310.32 Aligned_cols=256 Identities=23% Similarity=0.371 Sum_probs=204.9
Q ss_pred hCCCcccceeeecCceEEEEEEecC----CeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP----GYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
..+|.+.+.||+|+||.||+|...+ ...||+|...... ....+.+.+|++++++++|||++++++++.+ ...++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 3468889999999999999996543 2468999886554 3445688999999999999999999999875 55789
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 84 VMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 999999999999997653 4689999999999999999999998 999999999999999999999999999986644
Q ss_pred cccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF 1007 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
..........++..|+|||.+....++.++||||||+++||+++ |..||...... +..... ..+...
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--------~~~~~~-~~~~~~--- 227 (270)
T cd05056 160 ESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN--------DVIGRI-ENGERL--- 227 (270)
T ss_pred ccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHH-HcCCcC---
Confidence 33222223345568999999988889999999999999999986 99998643211 111111 111111
Q ss_pred cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 001562 1008 LPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQLK 1052 (1052)
Q Consensus 1008 ~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ik 1052 (1052)
..+...+..+.+++.+|+..+|++|||+.++++.|++++
T Consensus 228 ------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 228 ------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 112233456999999999999999999999999998763
No 168
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.5e-33 Score=308.57 Aligned_cols=255 Identities=26% Similarity=0.438 Sum_probs=205.1
Q ss_pred CCCcccceeeecCceEEEEEEec-CC---eEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PG---YLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
.+|+..+.||+|+||.||+|... ++ ..+|+|.+.... ....+++..|++++++++|+|++++++++.+.+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46788899999999999999764 23 379999886543 33456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
|||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.++++|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 85 TEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 99999999999997653 5689999999999999999999999 9999999999999999999999999999866432
Q ss_pred cccc--ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 930 ETHA--TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 930 ~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.... ......+..|+|||.+.+..++.++|||||||++|||++ |+.||..... .++.+.+. .+...
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--------~~~~~~i~-~~~~~-- 229 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--------HEVMKAIN-DGFRL-- 229 (268)
T ss_pred cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--------HHHHHHHh-cCCCC--
Confidence 2211 111223457999999998889999999999999999998 9999863211 12222222 11111
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 230 -------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 230 -------PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11223345689999999999999999999999999875
No 169
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=8.4e-34 Score=312.36 Aligned_cols=245 Identities=25% Similarity=0.362 Sum_probs=194.8
Q ss_pred eeecCceEEEEEEec-CCeEEEEEEeccCchh---hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCH
Q 001562 783 IGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ---GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNL 858 (1052)
Q Consensus 783 Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 858 (1052)
||+|+||+||+|... +++.||+|++...... ..+.+..|++++++++|+||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999654 6889999998654322 235677899999999999999999999999999999999999999
Q ss_pred HHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccC
Q 001562 859 ETFIHKK--SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTD 936 (1052)
Q Consensus 859 ~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 936 (1052)
.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+........ ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence 9888542 235689999999999999999999999 999999999999999999999999999976543222 2234
Q ss_pred ccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCC
Q 001562 937 VAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGP 1016 (1052)
Q Consensus 937 ~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1016 (1052)
..|++.|+|||.+.+..++.++||||+|+++|||++|+.||...... ....+....... . . ...+
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~----~~~~~~~~~~~~-~--~--------~~~~ 221 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK----VENKELKQRILN-D--S--------VTYP 221 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcc----hhHHHHHHhhcc-c--C--------CCCc
Confidence 56889999999999999999999999999999999999999743221 011111111110 0 0 0112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001562 1017 QENLLGMMRLASTCTVETLSTRP-----SVKQVLI 1046 (1052)
Q Consensus 1017 ~~~~~~l~~Li~~cl~~dP~~RP-----s~~eil~ 1046 (1052)
...+..+.+++.+|++.||++|| +++++++
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 222 DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 23445688999999999999999 6777764
No 170
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=9.9e-34 Score=314.71 Aligned_cols=263 Identities=21% Similarity=0.378 Sum_probs=203.1
Q ss_pred hCCCcccceeeecCceEEEEEEec-----------------CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceee
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-----------------PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVT 835 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 835 (1052)
.++|++.+.||+|+||.||+|... ++..||+|++.... .....++.+|+++++.++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 357999999999999999998532 23468999987543 334567899999999999999999
Q ss_pred EEEEEecCCeEEEEEeecCCCCHHHHHhhccC---------CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 001562 836 LIGYYVGEAEMFLVYNFLSGGNLETFIHKKSG---------KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSN 906 (1052)
Q Consensus 836 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~N 906 (1052)
+++++..++..++||||+++++|.+++..... ..+++.++..++.|++.|++|||+. +|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 99999999999999999999999999976431 2467889999999999999999999 99999999999
Q ss_pred EEECCCCcEEEEeccccccccccccc-cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCccc
Q 001562 907 ILLDEELNAYLSDFGLARLLEVSETH-ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS--GKRSLDPSFSE 983 (1052)
Q Consensus 907 ill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt--g~~p~~~~~~~ 983 (1052)
|++++++.++|+|||++..+...... ......++..|++||...++.++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 99999999999999999865432221 1222345678999999888889999999999999999998 66777532111
Q ss_pred CCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 984 YGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
................ ... ..+..++..+.+++.+||+.||++||++.|+++.|++
T Consensus 241 -----~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 241 -----QVIENTGEFFRDQGRQ-VYL-----PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred -----HHHHHHHHHHhhcccc-ccC-----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1111111111111100 000 1122334568999999999999999999999999874
No 171
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.3e-33 Score=314.01 Aligned_cols=263 Identities=22% Similarity=0.381 Sum_probs=205.0
Q ss_pred hCCCcccceeeecCceEEEEEEecC-----------------CeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceee
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP-----------------GYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVT 835 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 835 (1052)
.++|++.+.||+|+||.||+|.... +..||+|++..... ...+++.+|++++++++|||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4579999999999999999986542 25689999875532 34567899999999999999999
Q ss_pred EEEEEecCCeEEEEEeecCCCCHHHHHhhcc---------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 001562 836 LIGYYVGEAEMFLVYNFLSGGNLETFIHKKS---------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSN 906 (1052)
Q Consensus 836 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~N 906 (1052)
+++++..++..++|+||+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 9999999999999999999999999997653 12689999999999999999999999 99999999999
Q ss_pred EEECCCCcEEEEecccccccccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCccc
Q 001562 907 ILLDEELNAYLSDFGLARLLEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS--GKRSLDPSFSE 983 (1052)
Q Consensus 907 ill~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt--g~~p~~~~~~~ 983 (1052)
|+++.++.++|+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-- 238 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT-- 238 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--
Confidence 9999999999999999986543322 22233456778999999998889999999999999999998 566664211
Q ss_pred CCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 984 YGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
................... ....+...+.++.+++.+|++.||++||++.|+++.|++
T Consensus 239 ---~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 239 ---DQQVIENAGHFFRDDGRQI------YLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred ---hHHHHHHHHhccccccccc------cCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 1111111111111111110 011122334569999999999999999999999998864
No 172
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.3e-33 Score=309.24 Aligned_cols=254 Identities=25% Similarity=0.450 Sum_probs=203.6
Q ss_pred CCcccceeeecCceEEEEEEecC-C---eEEEEEEeccC-chhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELVP-G---YLVAVKKLSIG-RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
.|++.+.||+|+||.||+|.... + ..||+|.+... ......+|..|+.++++++||||+++++++.++...++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 57889999999999999997643 2 36999998754 3334578999999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++++|.+++.... ..+++.++..++.|++.|++|||++ +++||||||+||+++.++.++++|||++.......
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 85 EFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred ecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 9999999999997654 4689999999999999999999999 99999999999999999999999999987654322
Q ss_pred ccc--ccCc--cccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 931 THA--TTDV--AGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 931 ~~~--~~~~--~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
... .... ..+..|+|||.+.+..++.++||||+|+++||+++ |..||..... .+..+.. ......
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--------~~~~~~i-~~~~~~- 230 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--------QDVINAI-EQDYRL- 230 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--------HHHHHHH-HcCCcC-
Confidence 111 1111 12457999999999999999999999999999987 9999863211 1112222 111110
Q ss_pred cccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1006 LFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1006 ~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+.+.+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 231 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 231 --------PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11223345688999999999999999999999999875
No 173
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=9.5e-34 Score=317.08 Aligned_cols=240 Identities=25% Similarity=0.340 Sum_probs=191.3
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhcc-CCcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGR-IRHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
+.||+|+||+||+|... +++.||+|+++... ....+.+..|..++.. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999765 47899999986542 1233456667777776 4899999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
|+|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||++++++.+||+|||++....... ....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 154 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKTC 154 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-Ccee
Confidence 9999999764 4688999999999999999999999 99999999999999999999999999987432211 1223
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||++.+..++.++||||+||++|||++|+.||.... ..+..+.... ... . .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~--------~~~~~~~i~~-~~~------~----~ 215 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD--------EEELFQSIRM-DNP------C----Y 215 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHh-CCC------C----C
Confidence 4568999999999999899999999999999999999999997421 1122222211 111 0 1
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSVK-QVL 1045 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~~-eil 1045 (1052)
+......+.+++.+|++.||++||++. ++.
T Consensus 216 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 216 PRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred CccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 112234588999999999999999997 553
No 174
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=6.5e-34 Score=315.03 Aligned_cols=261 Identities=25% Similarity=0.321 Sum_probs=195.3
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh--hHHHHHHHHHHhccC---CcCceeeEEEEEec-----CC
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRI---RHKNLVTLIGYYVG-----EA 844 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~~ 844 (1052)
+|++.+.||+|+||+||+|... +++.||+|.++..... ....+.+|+++++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4888999999999999999665 6889999988654322 223456677777665 69999999998864 34
Q ss_pred eEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccc
Q 001562 845 EMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLAR 924 (1052)
Q Consensus 845 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~ 924 (1052)
..++||||++ ++|.+++.......++++.+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCccc
Confidence 5799999996 5899999876556689999999999999999999999 99999999999999999999999999998
Q ss_pred cccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH---HhC
Q 001562 925 LLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLI---KEG 1001 (1052)
Q Consensus 925 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~ 1001 (1052)
..... .......++..|+|||++.+..++.++||||+||++|||++|++||...... ........... ...
T Consensus 157 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~----~~~~~~~~~~~~~~~~~ 230 (288)
T cd07863 157 IYSCQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA----DQLGKIFDLIGLPPEDD 230 (288)
T ss_pred cccCc--ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH----HHHHHHHHHhCCCChhh
Confidence 65422 2223346788999999999989999999999999999999999998643211 00111100000 000
Q ss_pred Cc------cccccch---hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1002 RS------SELFLPE---LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1002 ~~------~~~~~~~---l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+. ...+.+. ......+.....+.+++.+|++.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 231 WPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00 0000000 000111233456889999999999999999999875
No 175
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=8.7e-34 Score=318.93 Aligned_cols=241 Identities=22% Similarity=0.312 Sum_probs=194.3
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+..|..++... +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788999999999999999665 57899999987542 22334566788888777 5899999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|+|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~- 154 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD- 154 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCC-
Confidence 999999999998765 4689999999999999999999999 9999999999999999999999999998754321
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
........|++.|+|||++.+..++.++||||+||++|||+||+.||..... .+..+.... ...
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--------~~~~~~i~~-~~~------- 218 (323)
T cd05616 155 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIME-HNV------- 218 (323)
T ss_pred CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--------HHHHHHHHh-CCC-------
Confidence 1222345689999999999999999999999999999999999999974321 122222221 111
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPSV 1041 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~ 1041 (1052)
..+......+.+++.+|++.||++|++.
T Consensus 219 ---~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 219 ---AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ---CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1122334558899999999999999984
No 176
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.8e-34 Score=323.82 Aligned_cols=238 Identities=27% Similarity=0.375 Sum_probs=193.4
Q ss_pred ceeeecCceEEEEEEe----cCCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecC
Q 001562 781 NLIGTGGFGSTYKAEL----VPGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
+.||+|+||.||+++. .+|+.||+|++..... .....+..|++++++++||||+++++++.+.+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999854 3578999999875432 234557789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT 934 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 934 (1052)
+|+|.+++... ..+++..+..++.|+++|++|||+. +|+||||||+||++++++.+||+|||++....... ...
T Consensus 82 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~ 155 (318)
T cd05582 82 GGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KKA 155 (318)
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-Cce
Confidence 99999999764 4689999999999999999999999 99999999999999999999999999997653221 222
Q ss_pred cCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcC
Q 001562 935 TDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEA 1014 (1052)
Q Consensus 935 ~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1014 (1052)
....|++.|+|||.+.+..++.++|||||||++|||++|+.||.... ..+........ .. .
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~--------~~~~~~~i~~~-~~----------~ 216 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD--------RKETMTMILKA-KL----------G 216 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC--------HHHHHHHHHcC-CC----------C
Confidence 34568999999999999889999999999999999999999997421 11222222211 11 1
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 001562 1015 GPQENLLGMMRLASTCTVETLSTRPSVKQ 1043 (1052)
Q Consensus 1015 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e 1043 (1052)
.+......+.+++.+||+.||++||++.+
T Consensus 217 ~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 217 MPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 12223445889999999999999999544
No 177
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.1e-33 Score=324.71 Aligned_cols=264 Identities=23% Similarity=0.314 Sum_probs=198.4
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccC--chhhHHHHHHHHHHhccCCcCceeeEEEEEecCC-----eEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIG--RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA-----EMF 847 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 847 (1052)
+|++.+.||+|+||.||+|.. .+++.||+|++... ......++.+|+++++.++||||+++++++.... ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999965 46899999988643 2234567889999999999999999999998766 789
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+|+||+. ++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999995 6888887653 4689999999999999999999999 99999999999999999999999999998654
Q ss_pred ccccccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCC--------CcchHH------
Q 001562 928 VSETHATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGN--------GFNIVS------ 992 (1052)
Q Consensus 928 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~--------~~~~~~------ 992 (1052)
...........+++.|+|||.+.+. .++.++||||+||++|||++|+.||....+.... ......
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 234 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE 234 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH
Confidence 4333333445678899999998874 4788999999999999999999999743221000 000000
Q ss_pred HHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 993 WAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
................+... .........+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 235 GARAHILRGPHKPPSLPVLY-TLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HHHHHHHhCCCCCCchHHhc-ccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 00000000000000000000 011122456889999999999999999999986
No 178
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.4e-33 Score=312.42 Aligned_cols=256 Identities=27% Similarity=0.406 Sum_probs=205.5
Q ss_pred hCCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEM 846 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 846 (1052)
.++|++.+.||+|+||.||+|... ++..||+|++..... ....++.+|++++++++|||++++++++.++...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 457899999999999999999753 467899998875432 3356788999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhcc--------------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 001562 847 FLVYNFLSGGNLETFIHKKS--------------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSN 906 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~N 906 (1052)
++|+||+++++|.+++.... ...+++.++..++.|++.|++|||++ +++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence 99999999999999997532 12467888999999999999999999 99999999999
Q ss_pred EEECCCCcEEEEecccccccccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccC
Q 001562 907 ILLDEELNAYLSDFGLARLLEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEY 984 (1052)
Q Consensus 907 ill~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~ 984 (1052)
|++++++.++|+|||++........ ........+..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~--- 237 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA--- 237 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC---
Confidence 9999999999999999876543221 11222345678999999998899999999999999999998 777875321
Q ss_pred CCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 985 GNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
..++.... ..+... ..+...+..+.+++.+|++.+|++||++.|+++.|++
T Consensus 238 -----~~~~~~~~-~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 238 -----HEEVIYYV-RDGNVL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred -----HHHHHHHH-hcCCCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 12222222 222211 1122334568999999999999999999999999875
No 179
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.3e-34 Score=327.90 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=197.2
Q ss_pred CCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||+||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688999999999999999965 468999999986432 223466788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999999999764 4688999999999999999999999 99999999999999999999999999996432110
Q ss_pred cc----------------------------------------------cccCccccccccccccccCCCCCchhHHHHHH
Q 001562 931 TH----------------------------------------------ATTDVAGTFGYVAPEYATTCRVSDKADVYSFG 964 (1052)
Q Consensus 931 ~~----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG 964 (1052)
.. ......||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 00 00124689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCC---CCH
Q 001562 965 VVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTR---PSV 1041 (1052)
Q Consensus 965 ~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~R---Ps~ 1041 (1052)
|++|||++|+.||..... .+..+......... ..+ ........+.+++.+|+. +|.+| +++
T Consensus 236 vil~elltG~~Pf~~~~~--------~~~~~~i~~~~~~~--~~p-----~~~~~s~~~~dli~~lL~-~~~~r~~r~~~ 299 (377)
T cd05629 236 AIMFECLIGWPPFCSENS--------HETYRKIINWRETL--YFP-----DDIHLSVEAEDLIRRLIT-NAENRLGRGGA 299 (377)
T ss_pred hhhhhhhcCCCCCCCCCH--------HHHHHHHHccCCcc--CCC-----CCCCCCHHHHHHHHHHhc-CHhhcCCCCCH
Confidence 999999999999974321 11122222111100 001 011223458899999997 66665 599
Q ss_pred HHHHHH
Q 001562 1042 KQVLIK 1047 (1052)
Q Consensus 1042 ~eil~~ 1047 (1052)
.|+++.
T Consensus 300 ~~~l~h 305 (377)
T cd05629 300 HEIKSH 305 (377)
T ss_pred HHHhcC
Confidence 988753
No 180
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.2e-33 Score=305.16 Aligned_cols=249 Identities=27% Similarity=0.405 Sum_probs=202.3
Q ss_pred ceeeecCceEEEEEEecC--C--eEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELVP--G--YLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
++||+|++|.||+|.+.. + ..||+|.+..... ...+++..|++.+++++|||++++++++.+ ...++|+||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999997643 2 3699999987665 556789999999999999999999999988 889999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc--c
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH--A 933 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~--~ 933 (1052)
++|.+++.......+++..+..++.|+++|++|||+. +++||||+|+||+++.++.+||+|||++......... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 9999999876435689999999999999999999999 9999999999999999999999999999876542221 1
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+..+.........
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--------~~~~~~~~~~~~~~~-------- 220 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS--------GSQILKKIDKEGERL-------- 220 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHhcCCcC--------
Confidence 122456788999999999899999999999999999999 999986321 122222222211111
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
..+...+..+.+++.+|++.+|++||++.|+++.|.+
T Consensus 221 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 221 -ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred -CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 1122334568999999999999999999999998863
No 181
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=8.4e-34 Score=318.18 Aligned_cols=241 Identities=23% Similarity=0.328 Sum_probs=194.4
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
+.||+|+||+||+|... +++.||+|++.... ......+..|.++++.+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999665 57899999987542 23345667888888887 799999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++..... .....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~ 154 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG-GVTTS 154 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcC-CCccc
Confidence 9999998765 4689999999999999999999999 9999999999999999999999999998743211 12223
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||++.+..++.++||||+||++|||++|+.||.... ..+...... .... ..
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~--------~~~~~~~i~-~~~~----------~~ 215 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD--------EDELFQSIL-EDEV----------RY 215 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC--------HHHHHHHHH-cCCC----------CC
Confidence 3468999999999999999999999999999999999999997422 112222221 1111 11
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSV-----KQVLI 1046 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~-----~eil~ 1046 (1052)
+...+..+.+++.+||+.||++||++ .++++
T Consensus 216 ~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 216 PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 22234458899999999999999999 77764
No 182
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.2e-33 Score=318.78 Aligned_cols=254 Identities=23% Similarity=0.332 Sum_probs=197.8
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+.+++.++|+||+++++++.++...|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46899999999999999999754 58899999986422 223456888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|+|.+++.... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 9999999999997643 5689999999999999999999999 99999999999999999999999999997654333
Q ss_pred cccccCccccccccccccccC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 931 THATTDVAGTFGYVAPEYATT-----CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~-----~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
........|++.|+|||++.. ..++.++||||+||++|||++|+.||... +..+............
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~--------~~~~~~~~i~~~~~~~- 227 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE--------SLVETYGKIMNHKEHF- 227 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC--------CHHHHHHHHHcCCCcc-
Confidence 323333468999999999873 45678999999999999999999999732 1222222222211111
Q ss_pred cccchhhcCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 001562 1006 LFLPELWEAGPQENLLGMMRLASTCTVETLST--RPSVKQVLI 1046 (1052)
Q Consensus 1006 ~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~--RPs~~eil~ 1046 (1052)
.+ +. .....+..+.+++.+|++.++++ ||++.++++
T Consensus 228 ~~-~~----~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 228 QF-PP----DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred cC-CC----ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 01 11 11123445788888887654443 789988875
No 183
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.2e-33 Score=310.94 Aligned_cols=256 Identities=22% Similarity=0.374 Sum_probs=205.3
Q ss_pred hCCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEM 846 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 846 (1052)
.++|++.+.||+|+||.||+|... .+..||+|.+.... ......+.+|+++++.++|||++++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 357889999999999999999654 24689999986543 23346788999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhcc--------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEE
Q 001562 847 FLVYNFLSGGNLETFIHKKS--------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLS 918 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~ 918 (1052)
++||||+++++|.+++.... ...+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 99999999999999997543 12468889999999999999999999 99999999999999999999999
Q ss_pred ecccccccccccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHH
Q 001562 919 DFGLARLLEVSET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKL 996 (1052)
Q Consensus 919 Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 996 (1052)
|||+++....... .......++..|+|||.+.+..++.++|||||||++||+++ |..||.... ..+..+.
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--------~~~~~~~ 233 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS--------NEEVLKF 233 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC--------HHHHHHH
Confidence 9999986543322 12223446788999999998889999999999999999998 888885321 1222222
Q ss_pred HHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 997 LIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 997 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
.. .+... . .+...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus 234 ~~-~~~~~-----~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 234 VI-DGGHL-----D----LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred Hh-cCCCC-----C----CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 22 21111 1 122234568999999999999999999999999864
No 184
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-33 Score=325.63 Aligned_cols=262 Identities=21% Similarity=0.227 Sum_probs=198.2
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
...|.+.+.||+|+||.||+|... .++.||||.... ..+.+|++++++++|+||+++++++...+..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457999999999999999999665 478899996422 3456899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc-
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET- 931 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~- 931 (1052)
+ .++|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 242 ~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 242 Y-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316 (461)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence 9 579999987643 4689999999999999999999999 999999999999999999999999999986543221
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc--
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP-- 1009 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1009 (1052)
.......||+.|+|||++.+..++.++|||||||++|||++|..|+..............+..+.+...+.....+.+
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 122245689999999999999999999999999999999998876643221111111111111111111110000000
Q ss_pred ----------------------hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1010 ----------------------ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1010 ----------------------~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
.-|... ......+.+++.+|++.||++|||+.|+++.
T Consensus 397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRPAYTRPAWTRY-YKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred chHHHHHHHhhhhcccCCccCCcchhhh-ccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000000 0112357889999999999999999999864
No 185
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=6.9e-34 Score=313.79 Aligned_cols=250 Identities=27% Similarity=0.360 Sum_probs=200.6
Q ss_pred CcccceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 777 FSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
|++.+.||+|+||.||+|... +++.||+|.+..... .....+..|+.++++++|++++++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 677899999999999999654 688999998865432 2234577899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++.......+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 156 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence 9999999999766556789999999999999999999998 99999999999999999999999999987553222
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
......|+..|+|||++.+..++.++||||+|+++|||++|+.||...... . ..+......... .
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~----~-~~~~~~~~~~~~----------~ 221 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK----I-KREEVERLVKEV----------Q 221 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCcc----c-hHHHHHhhhhhh----------h
Confidence 122346899999999999999999999999999999999999999743221 0 001111111100 0
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPS-----VKQVLI 1046 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs-----~~eil~ 1046 (1052)
...+......+.+++.+||+.||++||+ ++|+++
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 222 EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0112223345889999999999999999 888876
No 186
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.7e-33 Score=321.65 Aligned_cols=257 Identities=26% Similarity=0.354 Sum_probs=196.0
Q ss_pred hhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccC--chhhHHHHHHHHHHhccCCcCceeeEEEEEecCC-----
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIG--RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA----- 844 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 844 (1052)
..++|++.+.||+|+||.||+|.. .+|..||+|++... .......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 346899999999999999999965 45899999998643 2233467788999999999999999999986443
Q ss_pred -eEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccc
Q 001562 845 -EMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLA 923 (1052)
Q Consensus 845 -~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla 923 (1052)
..|+||||++ +++.+++.. .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 5799999995 567776643 378899999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCc
Q 001562 924 RLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRS 1003 (1052)
Q Consensus 924 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
+..... .......+++.|+|||.+.+..++.++||||+||++|||++|+.||...... ..|.......+..
T Consensus 171 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~-------~~~~~~~~~~~~~ 241 (359)
T cd07876 171 RTACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI-------DQWNKVIEQLGTP 241 (359)
T ss_pred cccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHHhcCCC
Confidence 754321 2223456889999999999999999999999999999999999999743211 1111111110000
Q ss_pred c---------------------c--ccc---ch-hhc---CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1004 S---------------------E--LFL---PE-LWE---AGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1004 ~---------------------~--~~~---~~-l~~---~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. . .+. +. ... ..+......+.+++.+|++.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 242 SAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred cHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 0 000 00 000 001112345889999999999999999999986
No 187
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.9e-33 Score=315.11 Aligned_cols=258 Identities=24% Similarity=0.426 Sum_probs=204.2
Q ss_pred hhCCCcccceeeecCceEEEEEEec--------CCeEEEEEEeccCc-hhhHHHHHHHHHHhccC-CcCceeeEEEEEec
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV--------PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVG 842 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 842 (1052)
..++|.+.+.||+|+||.||+|... ....||+|.+.... .....++..|+++++++ +||||+++++++.+
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 3457889999999999999999642 24579999887543 23456788999999999 69999999999999
Q ss_pred CCeEEEEEeecCCCCHHHHHhhcc--------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 001562 843 EAEMFLVYNFLSGGNLETFIHKKS--------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNIL 908 (1052)
Q Consensus 843 ~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nil 908 (1052)
....++||||+++|+|.+++.... ...+++.++.+++.|++.|++|||++ ||+||||||+||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil 166 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVL 166 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEE
Confidence 899999999999999999997642 24588999999999999999999999 9999999999999
Q ss_pred ECCCCcEEEEecccccccccccccc-ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCC
Q 001562 909 LDEELNAYLSDFGLARLLEVSETHA-TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGN 986 (1052)
Q Consensus 909 l~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~ 986 (1052)
+++++.+||+|||.++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~----- 241 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP----- 241 (314)
T ss_pred EcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC-----
Confidence 9999999999999998654322211 112234567999999999889999999999999999999 788875321
Q ss_pred CcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 987 GFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+... ....+... ..+..++..+.+++.+|++.+|++||++.|+++.|+++
T Consensus 242 ---~~~~~~-~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 242 ---VEELFK-LLREGHRM---------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred ---HHHHHH-HHHcCCCC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 112222 22222111 11223344688999999999999999999999999865
No 188
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.1e-34 Score=328.09 Aligned_cols=250 Identities=22% Similarity=0.318 Sum_probs=196.4
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
+|++.+.||+|+||.||+|+.. +++.||+|++..... .....+.+|++++++++|+||+++++.+.+++..|+|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6899999999999999999654 588999999864322 234567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc-
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE- 930 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~- 930 (1052)
|+++|+|.+++... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+|..+....
T Consensus 82 ~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 82 YIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 99999999999765 4688899999999999999999999 99999999999999999999999999975331000
Q ss_pred -----------------------------------------cccccCccccccccccccccCCCCCchhHHHHHHHHHHH
Q 001562 931 -----------------------------------------THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLE 969 (1052)
Q Consensus 931 -----------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~e 969 (1052)
........||+.|+|||++.+..++.++||||+||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 000123468999999999999999999999999999999
Q ss_pred HHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCC---CHHHHHH
Q 001562 970 LISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRP---SVKQVLI 1046 (1052)
Q Consensus 970 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RP---s~~eil~ 1046 (1052)
|++|+.||....+. +.......... ....+ ........+.+++.+|+ .+|.+|+ ++.|+++
T Consensus 237 ll~G~~Pf~~~~~~--------~~~~~i~~~~~--~~~~~-----~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 237 MLVGQPPFLADTPA--------ETQLKVINWET--TLHIP-----SQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred hhhCCCCCCCCCHH--------HHHHHHhccCc--cccCC-----CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 99999999743221 22222111110 00000 01122344777888876 5999999 8888875
No 189
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.3e-33 Score=314.68 Aligned_cols=255 Identities=27% Similarity=0.418 Sum_probs=200.3
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCe--EEEEEEeccCc-hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGY--LVAVKKLSIGR-FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 848 (1052)
.++|++.+.||+|+||.||+|..+ ++. .+|+|.+.... .....++.+|++++.++ +||||+++++++.+++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 357889999999999999999764 343 46777765432 23456788999999999 89999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcc--------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCc
Q 001562 849 VYNFLSGGNLETFIHKKS--------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELN 914 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~ 914 (1052)
||||+++++|.++++... ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCc
Confidence 999999999999997542 23578999999999999999999999 9999999999999999999
Q ss_pred EEEEeccccccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHH
Q 001562 915 AYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSW 993 (1052)
Q Consensus 915 ~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 993 (1052)
+||+|||++...... .......++..|+|||.+.+..++.++|||||||++|||+| |..||..... .+.
T Consensus 163 ~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~ 232 (303)
T cd05088 163 AKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AEL 232 (303)
T ss_pred EEeCccccCcccchh--hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh--------HHH
Confidence 999999998633211 11111234568999999988888999999999999999998 9999863211 121
Q ss_pred HHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 994 AKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+.. ..+... . .+...+..+.+++.+||+.+|++||+++++++.++++
T Consensus 233 ~~~~-~~~~~~-----~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 233 YEKL-PQGYRL-----E----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred HHHH-hcCCcC-----C----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 2211 111100 0 1112334588999999999999999999999988764
No 190
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.3e-33 Score=309.07 Aligned_cols=255 Identities=23% Similarity=0.400 Sum_probs=202.3
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCe----EEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGY----LVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 847 (1052)
..+|++.++||+|+||+||+|.+. +++ .||+|++..... ....++.+|+.+++.++|||++++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 356889999999999999999753 343 589998865432 335678899999999999999999999875 4578
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+++||+++|+|.++++... ..+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||+++...
T Consensus 85 l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 9999999999999997653 4689999999999999999999999 99999999999999999999999999998764
Q ss_pred ccccc-cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 928 VSETH-ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 928 ~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
..... ......++..|+|||...+..++.++|||||||++|||++ |..||..... .+ .......+....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~-~~~~~~~~~~~~ 231 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--------RE-IPDLLEKGERLP 231 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HH-HHHHHHCCCcCC
Confidence 32221 1122335678999999999899999999999999999998 8888863221 11 111222221111
Q ss_pred cccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1006 LFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1006 ~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+...+..+.+++.+||+.||++||++.|+++.++++
T Consensus 232 ---------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~ 268 (279)
T cd05109 232 ---------QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM 268 (279)
T ss_pred ---------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 1122344588999999999999999999999998875
No 191
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.1e-33 Score=310.20 Aligned_cols=262 Identities=24% Similarity=0.393 Sum_probs=204.6
Q ss_pred CCcccceeeecCceEEEEEEe-----cCCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecC--CeEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-----VPGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE--AEMF 847 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 847 (1052)
.|++.+.||+|+||.||.|.. .++..||+|.++... ......+.+|++++++++|||++++++++.+. ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 478889999999999999964 347889999986543 33356789999999999999999999998875 5689
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+||||+++++|.+++.... ..+++..+..++.|++.|++|||++ ||+||||||+||+++.++.++|+|||++....
T Consensus 85 lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccccc
Confidence 9999999999999997653 4589999999999999999999999 99999999999999999999999999998664
Q ss_pred ccccc--cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccC-------CCCcchHHHHHHHH
Q 001562 928 VSETH--ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEY-------GNGFNIVSWAKLLI 998 (1052)
Q Consensus 928 ~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~-------~~~~~~~~~~~~~~ 998 (1052)
..... ......++..|+|||.+.+..++.++||||||+++|||++++.|........ ..........+ ..
T Consensus 161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 239 (284)
T cd05079 161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR-VL 239 (284)
T ss_pred cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH-HH
Confidence 32221 1223456678999999998889999999999999999999887654221110 00111111111 11
Q ss_pred HhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 999 KEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 999 ~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+... ..+...+..+.+++.+|++.+|++||++.++++.++++
T Consensus 240 ~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 240 EEGKRL---------PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HcCccC---------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111111 11223455699999999999999999999999999875
No 192
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=7.6e-34 Score=327.19 Aligned_cols=250 Identities=21% Similarity=0.304 Sum_probs=194.9
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
.|++.++||+|+||+||+|.. .+++.||+|++.... ......+.+|++++++++||||+++++++.+....|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588999999999999999965 458899999986542 2334678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc-
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE- 930 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~- 930 (1052)
|+++|+|.+++.+. ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999999765 4688999999999999999999999 99999999999999999999999999975331100
Q ss_pred ---------------------------------------------cccccCccccccccccccccCCCCCchhHHHHHHH
Q 001562 931 ---------------------------------------------THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGV 965 (1052)
Q Consensus 931 ---------------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~ 965 (1052)
.......+||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 00012246899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCC---HH
Q 001562 966 VLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPS---VK 1042 (1052)
Q Consensus 966 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs---~~ 1042 (1052)
++|||++|+.||....+ .+............. .+ ..........+++.+|+ .+|++|++ +.
T Consensus 237 il~elltG~~Pf~~~~~--------~~~~~~i~~~~~~~~--~p-----~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ 300 (382)
T cd05625 237 ILYEMLVGQPPFLAQTP--------LETQMKVINWQTSLH--IP-----PQAKLSPEASDLIIKLC-RGPEDRLGKNGAD 300 (382)
T ss_pred HHHHHHhCCCCCCCCCH--------HHHHHHHHccCCCcC--CC-----CcccCCHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence 99999999999974321 111122211111100 00 01112334677777765 59999997 77
Q ss_pred HHHH
Q 001562 1043 QVLI 1046 (1052)
Q Consensus 1043 eil~ 1046 (1052)
|+++
T Consensus 301 ei~~ 304 (382)
T cd05625 301 EIKA 304 (382)
T ss_pred HHhc
Confidence 7664
No 193
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.1e-33 Score=304.01 Aligned_cols=247 Identities=27% Similarity=0.410 Sum_probs=198.3
Q ss_pred ceeeecCceEEEEEEecC----CeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELVP----GYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
+.||+|+||.||+|.+.. +..+|+|.+..... ...+++.+|+++++++.|+|++++++++. ....++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 468999999999995432 26899999875543 24567889999999999999999999876 4568999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc-
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT- 934 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~- 934 (1052)
++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++..........
T Consensus 80 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~ 154 (257)
T cd05060 80 GPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA 154 (257)
T ss_pred CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccccc
Confidence 99999998753 689999999999999999999999 999999999999999999999999999986643332211
Q ss_pred -cCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 935 -TDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 935 -~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
....++..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+..+.. ..+...
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--------~~~~~~~-~~~~~~-------- 217 (257)
T cd05060 155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--------AEVIAML-ESGERL-------- 217 (257)
T ss_pred ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHH-HcCCcC--------
Confidence 11223468999999999899999999999999999998 9999864311 1222222 222111
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 218 -~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 218 -PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred -CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 12223345689999999999999999999999999876
No 194
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.4e-33 Score=305.48 Aligned_cols=240 Identities=25% Similarity=0.344 Sum_probs=189.8
Q ss_pred ceeeecCceEEEEEEecC-------------CeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEE
Q 001562 781 NLIGTGGFGSTYKAELVP-------------GYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 847 (1052)
+.||+|+||.||+|.+.. ...||+|.+..........+.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999996532 2358999877655555667888999999999999999999999989999
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCc-------EEEEec
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELN-------AYLSDF 920 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~-------~kl~Df 920 (1052)
+||||+++++|..++.... ..+++..+.+++.||++|++|||++ +|+||||||+||+++.++. ++++||
T Consensus 81 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999987643 4689999999999999999999999 9999999999999987654 899999
Q ss_pred cccccccccccccccCcccccccccccccc-CCCCCchhHHHHHHHHHHHHH-hCCCCCCCCcccCCCCcchHHHHHHHH
Q 001562 921 GLARLLEVSETHATTDVAGTFGYVAPEYAT-TCRVSDKADVYSFGVVLLELI-SGKRSLDPSFSEYGNGFNIVSWAKLLI 998 (1052)
Q Consensus 921 gla~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~sDv~slG~il~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
|++..... .....++..|+|||.+. +..++.++|||||||++|||+ +|..||..... .+..+ ..
T Consensus 157 g~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--------~~~~~-~~ 222 (262)
T cd05077 157 GIPITVLS-----RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL--------AEKER-FY 222 (262)
T ss_pred CCCccccC-----cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch--------hHHHH-HH
Confidence 99875432 12345778899999887 466888999999999999998 57777653211 11111 11
Q ss_pred HhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 999 KEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 999 ~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
.+... .. ......+.+++.+||+.||++||++.++++.++
T Consensus 223 -~~~~~------~~----~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 223 -EGQCM------LV----TPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred -hcCcc------CC----CCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 11100 00 112345889999999999999999999998763
No 195
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.1e-33 Score=316.66 Aligned_cols=240 Identities=24% Similarity=0.333 Sum_probs=191.4
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
++||+|+||.||+|+.. +|+.||+|+++... ....+.+..|..++... +||+|+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999765 58899999986532 22345566777777654 899999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
|+|.+++... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++|+|||+++..... .....
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~ 154 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-DNRAS 154 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccC-CCcee
Confidence 9999998764 4688999999999999999999999 9999999999999999999999999998743211 12233
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||++.+..++.++||||+||++|||++|+.||..... .+..+... ... +. .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--------~~~~~~~~-~~~------~~----~ 215 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--------DELFESIR-VDT------PH----Y 215 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHH-hCC------CC----C
Confidence 45689999999999999999999999999999999999999974321 12222221 111 11 1
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSVK-QVL 1045 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~~-eil 1045 (1052)
+......+.+++.+|++.||++||++. ++.
T Consensus 216 ~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 216 PRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 112334588999999999999999985 444
No 196
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.9e-33 Score=308.81 Aligned_cols=250 Identities=24% Similarity=0.378 Sum_probs=200.9
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecC
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
.|++.+.||+|+||.||+|... ++..+++|.+........+.+.+|+++++.++|||++++++++..+...++|+||++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 3678899999999999999665 478889999876666666788999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT 934 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 934 (1052)
+++|..++.... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++|+|||++...... ....
T Consensus 86 ~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-~~~~ 160 (282)
T cd06643 86 GGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQRR 160 (282)
T ss_pred CCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccc-cccc
Confidence 999999887543 5689999999999999999999999 9999999999999999999999999998754322 1222
Q ss_pred cCcccccccccccccc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 935 TDVAGTFGYVAPEYAT-----TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 935 ~~~~g~~~y~aPE~~~-----~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
....+++.|+|||++. +..++.++||||+||++|||++|++||....+ .+.............
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--------~~~~~~~~~~~~~~~---- 228 (282)
T cd06643 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAKSEPPTL---- 228 (282)
T ss_pred ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH--------HHHHHHHhhcCCCCC----
Confidence 3356888999999984 34567899999999999999999999863211 111111111111110
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+...+..+.+++.+||+.+|++||++.++++
T Consensus 229 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 229 ----AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ----CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112223456899999999999999999999875
No 197
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.4e-33 Score=319.81 Aligned_cols=259 Identities=26% Similarity=0.373 Sum_probs=201.4
Q ss_pred hhCCCcccceeeecCceEEEEEEe------cCCeEEEEEEeccCch-hhHHHHHHHHHHhccC-CcCceeeEEEEEecC-
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL------VPGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGE- 843 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~- 843 (1052)
..++|++.+.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.++.++ +||||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 346799999999999999999953 3478899999875432 3346688999999999 689999999988654
Q ss_pred CeEEEEEeecCCCCHHHHHhhccC--------------------------------------------------------
Q 001562 844 AEMFLVYNFLSGGNLETFIHKKSG-------------------------------------------------------- 867 (1052)
Q Consensus 844 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 867 (1052)
...++||||+++|+|.+++.....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 567999999999999999865321
Q ss_pred ---------CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc-ccccCc
Q 001562 868 ---------KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET-HATTDV 937 (1052)
Q Consensus 868 ---------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~~~~ 937 (1052)
..+++..+.+++.|+++|++|||++ +|+||||||+||++++++.+||+|||++........ ......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 2367888899999999999999999 999999999999999999999999999986532221 122223
Q ss_pred cccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCC
Q 001562 938 AGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGP 1016 (1052)
Q Consensus 938 ~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1016 (1052)
.++..|+|||.+.+..++.++||||||+++|||++ |..||...... .........+.... . +
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~--~-------~ 304 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------EEFCRRLKEGTRMR--A-------P 304 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc--------HHHHHHHhccCCCC--C-------C
Confidence 45678999999999899999999999999999997 88887532111 11112222221111 0 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1017 QENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1017 ~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
......+.+++.+||+.+|++||++.|+++.|+++
T Consensus 305 ~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 305 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11223588999999999999999999999999865
No 198
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=6.8e-34 Score=319.82 Aligned_cols=237 Identities=26% Similarity=0.364 Sum_probs=189.2
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHH-HhccCCcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIG-TLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
+.||+|+||+||+|... +|+.||+|++..... ....++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999764 689999999865322 22234444544 56789999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
|+|.+++... ..+++..+..++.||++|++|||++ +|+||||||+||+++.++.+||+|||++..... ......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~-~~~~~~ 154 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE-HSKTTS 154 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccccc-CCCccc
Confidence 9999999764 4688999999999999999999999 999999999999999999999999999875321 122233
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||.+.+..++.++|||||||++|||++|+.||.... ..+..+...... . .+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~-~------~~---- 215 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD--------TAEMYDNILNKP-L------RL---- 215 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC--------HHHHHHHHHcCC-C------CC----
Confidence 4568999999999999999999999999999999999999997421 222222222211 0 11
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSVK 1042 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~~ 1042 (1052)
+...+..+.+++.+|++.||++||+++
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 216 KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 112244588999999999999999885
No 199
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2e-33 Score=314.18 Aligned_cols=261 Identities=21% Similarity=0.310 Sum_probs=197.9
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
++|++.+.||+|+||.||+|... +++.||+|+++.... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56899999999999999999654 578899999865432 2234677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
++ ++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||.+....... .
T Consensus 86 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~ 159 (309)
T cd07872 86 LD-KDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT-K 159 (309)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCc-c
Confidence 96 58988887653 4588999999999999999999999 99999999999999999999999999997543221 2
Q ss_pred cccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH--------hCCc
Q 001562 933 ATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIK--------EGRS 1003 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 1003 (1052)
......+++.|+|||.+.+ ..++.++||||+||++|||+||+.||...... +..+....... ....
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-----DELHLIFRLLGTPTEETWPGISS 234 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCCHHHHhhhcc
Confidence 2233467889999998865 45788999999999999999999999743221 00000000000 0000
Q ss_pred ccc-cc---ch----hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1004 SEL-FL---PE----LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1004 ~~~-~~---~~----l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
... .+ +. ............+.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 235 NDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000 00 00 000011123456789999999999999999999886
No 200
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.1e-33 Score=308.70 Aligned_cols=250 Identities=24% Similarity=0.320 Sum_probs=199.4
Q ss_pred CcccceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 777 FSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
|+..+.||+|+||+||+|... +++.||+|.+..... .....+.+|++++++++|++++++++++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 677889999999999999664 688999999865432 2234577899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++.......+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-- 156 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence 9999999998765555799999999999999999999999 99999999999999999999999999997553221
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
......|+..|+|||.+.+..++.++|+||+|+++|||++|+.||...... ..... ......... . .
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~----~~~~~-~~~~~~~~~--~----~-- 223 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK----VKREE-VDRRVLETE--E----V-- 223 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH----HHHHH-HHHhhhccc--c----c--
Confidence 123346899999999999989999999999999999999999999743211 00011 111111110 0 1
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPS-----VKQVLI 1046 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs-----~~eil~ 1046 (1052)
.+...+..+.+++.+|++.||++||+ +.++++
T Consensus 224 --~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 224 --YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred --cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 12223345789999999999999999 666654
No 201
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.2e-33 Score=308.04 Aligned_cols=253 Identities=26% Similarity=0.469 Sum_probs=200.8
Q ss_pred HhhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEEEecC------
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGE------ 843 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------ 843 (1052)
.+.+.|++.+.||+|+||.||+|... +++.||+|++.... .....+..|+.+++++ +|+|++++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45678999999999999999999654 57899999986543 3346788899999998 799999999998753
Q ss_pred CeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccc
Q 001562 844 AEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLA 923 (1052)
Q Consensus 844 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla 923 (1052)
...++||||+++++|.+++.......+++..+..++.|++.|++|||++ +|+||||+|+||++++++.++|+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCc
Confidence 4689999999999999999876556789999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCcccccccccccccc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH
Q 001562 924 RLLEVSETHATTDVAGTFGYVAPEYAT-----TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLI 998 (1052)
Q Consensus 924 ~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
....... .......|+..|+|||++. +..++.++||||+||++|||++|+.||...... .... ..
T Consensus 159 ~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~-------~~~~--~~ 228 (272)
T cd06637 159 AQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-------RALF--LI 228 (272)
T ss_pred eeccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH-------HHHH--HH
Confidence 8654222 2223456888999999986 345778999999999999999999998632111 1111 11
Q ss_pred HhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 999 KEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 999 ~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...... .. .+...+..+.+++.+||+.+|.+||++.|+++
T Consensus 229 ~~~~~~-----~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 229 PRNPAP-----RL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred hcCCCC-----CC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 111101 11 11123346889999999999999999999875
No 202
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.6e-33 Score=307.35 Aligned_cols=251 Identities=24% Similarity=0.395 Sum_probs=199.1
Q ss_pred CCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 775 GNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
++|++.++||+|+||.||+|.. .+++.||+|++.... .....++.+|++++++++|||++++++++..+...++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3688889999999999999964 568899999986542 33346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--- 148 (279)
T cd06619 81 MDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--- 148 (279)
T ss_pred CCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---
Confidence 9999997652 367888999999999999999999 9999999999999999999999999999765322
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
......++..|+|||.+.+..++.++||||+|+++|||++|+.||.......... ...++.+..... ... .+.
T Consensus 149 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~-~~~-----~~~ 221 (279)
T cd06619 149 IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL-MPLQLLQCIVDE-DPP-----VLP 221 (279)
T ss_pred cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc-chHHHHHHHhcc-CCC-----CCC
Confidence 2233468899999999999899999999999999999999999997533221111 111111111111 111 110
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
......++.+++.+|++.+|++||+++|+++.
T Consensus 222 ---~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 222 ---VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred ---CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11123458899999999999999999998763
No 203
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-33 Score=311.36 Aligned_cols=250 Identities=24% Similarity=0.393 Sum_probs=205.0
Q ss_pred hCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
..+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+|++++++++..++..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 35799999999999999999965 46899999999776655567788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++... .+++.++..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 98 ~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~- 170 (297)
T cd06656 98 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 170 (297)
T ss_pred cCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc-
Confidence 9999999998653 478899999999999999999999 999999999999999999999999999876543221
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
......+++.|+|||.+.+..++.++||||+||++|++++|+.||....+... .......+...
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~--------~~~~~~~~~~~-------- 234 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--------LYLIATNGTPE-------- 234 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh--------eeeeccCCCCC--------
Confidence 22234678899999999998899999999999999999999999974322110 00000111000
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...+...+..+.+++.+||+.+|++||+++++++
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 235 LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0112233455889999999999999999999986
No 204
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.9e-33 Score=320.70 Aligned_cols=258 Identities=25% Similarity=0.320 Sum_probs=196.9
Q ss_pred hhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecC------
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE------ 843 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 843 (1052)
..++|++.+.||+|+||.||+|.. ..++.||+|++.... ......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 456899999999999999999954 458899999986532 23346778899999999999999999988643
Q ss_pred CeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccc
Q 001562 844 AEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLA 923 (1052)
Q Consensus 844 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla 923 (1052)
...++||||++ +++.+++.. .+++..+..++.|+++|++|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 95 ~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 95 QDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCccc
Confidence 35799999995 577777753 378899999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCC-
Q 001562 924 RLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGR- 1002 (1052)
Q Consensus 924 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 1002 (1052)
+..... .......+++.|+|||++.+..++.++||||+||++|||++|+.||...... ..+.......+.
T Consensus 167 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~~ 237 (355)
T cd07874 167 RTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-------DQWNKVIEQLGTP 237 (355)
T ss_pred ccCCCc--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHHHhCCC
Confidence 865422 2233456899999999999999999999999999999999999999743211 111111100000
Q ss_pred ---------------------ccccccchh-----h---cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1003 ---------------------SSELFLPEL-----W---EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1003 ---------------------~~~~~~~~l-----~---~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
......+.. . ...+......+.+++.+|++.||++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred CHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000000 0 00111223467899999999999999999999873
No 205
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.5e-33 Score=309.00 Aligned_cols=249 Identities=24% Similarity=0.415 Sum_probs=204.6
Q ss_pred CCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 775 GNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
.+|++.+.||.|+||.||+|.. .+++.||+|.+........+.+.+|+..++.++|||++++++++......++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4689999999999999999954 568999999987665555678889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++++|.+++... .+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++........ .
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~ 171 (296)
T cd06655 99 AGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-K 171 (296)
T ss_pred CCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc-c
Confidence 999999998654 489999999999999999999999 999999999999999999999999999886543322 2
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhc
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWE 1013 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1013 (1052)
.....++..|+|||.+.+..++.++|||||||++|+|++|+.||...... .......... ....
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~--------~~~~~~~~~~-~~~~------- 235 (296)
T cd06655 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--------RALYLIATNG-TPEL------- 235 (296)
T ss_pred CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhcC-Cccc-------
Confidence 22346788999999999988999999999999999999999999743221 1111111111 1100
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1014 AGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1014 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+...+..+.+++.+||..||++||++.++++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 236 QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 112223445889999999999999999999875
No 206
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.2e-33 Score=315.40 Aligned_cols=241 Identities=23% Similarity=0.324 Sum_probs=194.0
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCC-cCceeeEEEEEecCCeEEEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIR-HKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 850 (1052)
+|+..+.||+|+||+||+|... +|+.||+|++.... ....+.+..|..+++.+. |++|+++++++.+.+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3778899999999999999654 68899999986532 223456778888888885 577888999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|+|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||++++++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 999999999998765 4689999999999999999999999 99999999999999999999999999987543221
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||..... .+..+..... ..
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--------~~~~~~i~~~-~~------- 218 (323)
T cd05615 156 -VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--------DELFQSIMEH-NV------- 218 (323)
T ss_pred -ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhC-CC-------
Confidence 222345689999999999998999999999999999999999999974321 1222222221 11
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCCH
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPSV 1041 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~ 1041 (1052)
..+......+.+++.+|++.+|++|++.
T Consensus 219 ---~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 219 ---SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1122233458899999999999999974
No 207
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=5.9e-33 Score=301.64 Aligned_cols=250 Identities=23% Similarity=0.382 Sum_probs=206.6
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+|+..+.||+|+||.||.++. .+++.+++|.+.... .....++.+|++++++++|+||+++++++.+....+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 488899999999999999954 458899999886543 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++.......+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 9999999999876556789999999999999999999998 999999999999999999999999999986643332
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
......+++.|+|||...+..++.++||||+|+++|||++|+.||.... ..+....... +....
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~--------~~~~~~~~~~-~~~~~------- 220 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN--------PLNLVVKIVQ-GNYTP------- 220 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHc-CCCCC-------
Confidence 2334568899999999998888999999999999999999999986422 1222222222 21111
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
.+...+..+.+++.+||+.+|++||++.|+++.
T Consensus 221 --~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 221 --VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred --CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 112334558899999999999999999999875
No 208
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=4.5e-33 Score=303.69 Aligned_cols=250 Identities=26% Similarity=0.432 Sum_probs=194.0
Q ss_pred ceeeecCceEEEEEEec----CCeEEEEEEeccC-chhhHHHHHHHHHHhccCCcCceeeEEEEEe-cCCeEEEEEeecC
Q 001562 781 NLIGTGGFGSTYKAELV----PGYLVAVKKLSIG-RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYV-GEAEMFLVYNFLS 854 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 854 (1052)
+.||+|+||.||+|... .+..||+|++... .....+.+.+|+.+++.++|||++++++++. .++..++|+||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999653 2467999988543 3344578889999999999999999999876 4556899999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc---
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET--- 931 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~--- 931 (1052)
+++|.+++.... ...++..+..++.|+++|++|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 999999997653 3467788899999999999999999 999999999999999999999999999975532211
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
.......++..|+|||.+.+..++.++||||||+++|||++|+.|+.... +..+..+.........
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~-------~~~~~~~~~~~~~~~~------- 222 (262)
T cd05058 157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-------DSFDITVYLLQGRRLL------- 222 (262)
T ss_pred cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC-------CHHHHHHHHhcCCCCC-------
Confidence 11122345678999999998889999999999999999999655433211 1222223222211111
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+...+..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 223 ---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 223 ---QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred ---CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1112234688999999999999999999999999875
No 209
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.3e-33 Score=305.52 Aligned_cols=252 Identities=32% Similarity=0.505 Sum_probs=201.1
Q ss_pred CcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHH--HHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 777 FSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQ--QFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
|++.+.||+|+||+||+|... +++.||+|++......... ....|+.++++++||||+++++++.+....++|||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 678899999999999999765 4678999999876554332 3356999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++++|.+++... ..+++..+..++.|+++|+++||+. +|+|+||||+||++++++.++|+|||.+.... .....
T Consensus 81 ~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~~~ 154 (260)
T PF00069_consen 81 PGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENNEN 154 (260)
T ss_dssp TTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST-STTSE
T ss_pred cccccccccccc--ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc-ccccc
Confidence 999999999843 4689999999999999999999999 99999999999999999999999999997541 22233
Q ss_pred ccCcccccccccccccc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 934 TTDVAGTFGYVAPEYAT-TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~-~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
.....++..|+|||++. +..++.++||||+|+++|+|++|+.||.... ..+............ .....
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~-----~~~~~- 223 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESN-----SDDQLEIIEKILKRP-----LPSSS- 223 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS-----HHHHHHHHHHHHHTH-----HHHHT-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc-----chhhhhhhhhccccc-----ccccc-
Confidence 44556889999999998 8889999999999999999999999998431 011111111111100 00000
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.........+.+++.+|++.||++||++.++++
T Consensus 224 -~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 224 -QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp -TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred -cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 001111267999999999999999999999975
No 210
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.5e-33 Score=304.64 Aligned_cols=250 Identities=28% Similarity=0.427 Sum_probs=205.0
Q ss_pred hCCCcccceeeecCceEEEEEEecC-CeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP-GYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
.++|++.+.||+|+||.||+|.... ++.+++|.+..... .+++.+|++++++++|+|++++++++.++...|+++||
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 3579999999999999999997764 78999999865533 57899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++.... ..+++..+..++.|+++|+.|||+. +|+||||+|+||++++++.++|+|||++........
T Consensus 80 ~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (256)
T cd06612 80 CGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA- 154 (256)
T ss_pred CCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence 99999999997643 5789999999999999999999999 999999999999999999999999999986643321
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
......++..|+|||.+.+..++.++||||||+++|||++|+.||....+. .... ..... ... .
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~--------~~~~-~~~~~-~~~----~-- 218 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM--------RAIF-MIPNK-PPP----T-- 218 (256)
T ss_pred ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh--------hhhh-hhccC-CCC----C--
Confidence 223345788999999999989999999999999999999999998743221 0000 00000 000 0
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...+......+.+++.+||+.+|++||++.|+++
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 219 LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 0112233456899999999999999999999986
No 211
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.5e-33 Score=315.47 Aligned_cols=243 Identities=22% Similarity=0.309 Sum_probs=193.0
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
+.||+|+||+||+|... +++.||+|++.... ....+.+..|+.++.++ +||+|+++++++.+....|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999654 57899999997542 23345678899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP-GDTTS 154 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCC-CCcee
Confidence 9999988764 4689999999999999999999999 9999999999999999999999999998743211 12223
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||++.+..++.++||||+||++|||++|+.||....... .....++........... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~----------~ 222 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNP--DMNTEDYLFQVILEKPIR----------I 222 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCc--ccccHHHHHHHHHhCCCC----------C
Confidence 4568999999999999999999999999999999999999996432211 111222222222222111 1
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSV 1041 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~ 1041 (1052)
|......+.+++.+|++.||++|+++
T Consensus 223 p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 223 PRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 22233457899999999999999985
No 212
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.8e-33 Score=307.99 Aligned_cols=252 Identities=25% Similarity=0.391 Sum_probs=202.9
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
.+.|++.+.||+|+||.||+|+.. +++.||+|.+........+.+.+|+++++.++|||++++++++..+...++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 357999999999999999999765 4889999999877666677889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|..++.... ..+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||++...... ..
T Consensus 91 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-~~ 165 (292)
T cd06644 91 CPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-LQ 165 (292)
T ss_pred CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc-cc
Confidence 99999998886543 4689999999999999999999998 9999999999999999999999999998754322 12
Q ss_pred cccCcccccccccccccc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc
Q 001562 933 ATTDVAGTFGYVAPEYAT-----TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF 1007 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~-----~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
......+++.|+|||.+. ...++.++|||||||++|||++|+.||..... .+...... ......
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--------~~~~~~~~-~~~~~~-- 234 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MRVLLKIA-KSEPPT-- 234 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH--------HHHHHHHh-cCCCcc--
Confidence 223345788999999985 34467799999999999999999999863211 11111111 111110
Q ss_pred cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1008 LPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1008 ~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. ..+...+..+.+++.+||+.+|++||++.|+++
T Consensus 235 ---~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 235 ---L--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ---C--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0 112233456889999999999999999999975
No 213
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=6.6e-34 Score=320.21 Aligned_cols=240 Identities=27% Similarity=0.363 Sum_probs=190.0
Q ss_pred ceeeecCceEEEEEEe-cCCeEEEEEEeccCc---hhhHHHHHHHHH-HhccCCcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR---FQGIQQFDAEIG-TLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
+.||+|+||+||+|.. .+|+.||+|++.... ......+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999965 468999999986432 122344555554 56778999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
|+|..++... ..+++..+..++.||+.|++|||+. ||+||||||+||++++++.+||+|||+++..... .....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~ 154 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTTT 154 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCcc
Confidence 9999988764 4689999999999999999999999 9999999999999999999999999998743211 12233
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||++.+..++.++||||+||++|||++|+.||.... ..+..+...... .. +
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~--------~~~~~~~~~~~~---~~----~---- 215 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD--------VAEMYDNILHKP---LV----L---- 215 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC--------HHHHHHHHHcCC---cc----C----
Confidence 4568999999999999999999999999999999999999997421 122222222211 00 1
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSVKQVL 1045 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~~eil 1045 (1052)
++.....+.+++.+|++.+|.+||++++.+
T Consensus 216 ~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 216 RPGASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred CCCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 112334578999999999999999876433
No 214
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=6e-33 Score=303.97 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=191.9
Q ss_pred ceeeecCceEEEEEEecC---CeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCC
Q 001562 781 NLIGTGGFGSTYKAELVP---GYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGG 856 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 856 (1052)
+.||+|+||.||+|...+ +..+|+|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999997643 46799998865442 33457888999999999999999999999999999999999999
Q ss_pred CHHHHHhhcc---CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 857 NLETFIHKKS---GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 857 sL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
+|.++++... ....++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999997643 22456778889999999999999999 99999999999999999999999999997543322211
Q ss_pred -ccCccccccccccccccCC-------CCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCcc
Q 001562 934 -TTDVAGTFGYVAPEYATTC-------RVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSS 1004 (1052)
Q Consensus 934 -~~~~~g~~~y~aPE~~~~~-------~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
.....++..|+|||++.+. .++.++||||||+++|||++ |+.||....+. +......... ..
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~-~~ 228 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE--------QVLTYTVREQ-QL 228 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH--------HHHHHHhhcc-cC
Confidence 2234567889999998642 35779999999999999996 99998632211 1111111111 11
Q ss_pred ccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 1005 ELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 1005 ~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
....+.+.. .....+.+++..|| .+|++|||++|+.+.|+
T Consensus 229 ~~~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPKPRLKL----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCccCC----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111222211 12334788999999 58999999999999875
No 215
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1e-33 Score=318.65 Aligned_cols=241 Identities=25% Similarity=0.317 Sum_probs=189.7
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHH-HHhccCCcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEI-GTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
+.||+|+||+||+|... +++.||+|++..... .....+..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999665 578899999864321 2223344443 456788999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
|+|.+++... ..+.+..+..++.|+++|++|||+. ||+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~-~~~~~ 154 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NGTTS 154 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccC-CCCcc
Confidence 9999999764 4578888999999999999999999 9999999999999999999999999999753221 12233
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||++.+..++.++||||+||++|||++|+.||.... ..+..+...... . ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~~~-~----------~~ 215 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--------TAEMYDNILNKP-L----------QL 215 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC--------HHHHHHHHHhCC-c----------CC
Confidence 4568999999999999999999999999999999999999997322 112222222111 0 01
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
++.....+.+++.+|++.||.+||++.+.+.
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 216 KPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 1223445889999999999999998875443
No 216
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=7.5e-33 Score=301.02 Aligned_cols=249 Identities=26% Similarity=0.416 Sum_probs=202.6
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEec-CCeEEEEEe
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVG-EAEMFLVYN 851 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 851 (1052)
+|++.+.||+|++|.||+|... +++.||+|++.... ....+.+.+|++++++++|+|++++++.+.. +...+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4889999999999999999654 57889999986543 2345678899999999999999999998764 446899999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|+++++|.+++.......+++.++..++.+++.|+++||+. +|+||||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 99999999999876556789999999999999999999999 99999999999999999999999999998664322
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
.......+++.|+|||.+.+..++.++||||+|+++|||++|+.||.... ...+..... .+...
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~--------~~~~~~~~~-~~~~~------- 220 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD--------MNSLVYRII-EGKLP------- 220 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHH-hcCCC-------
Confidence 22334467889999999999999999999999999999999999986321 122222221 22111
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+......+.+++.+|++.+|++||++.++++
T Consensus 221 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 221 --PMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred --CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 112234456899999999999999999999975
No 217
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=9e-33 Score=301.34 Aligned_cols=254 Identities=25% Similarity=0.402 Sum_probs=206.5
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
.++|++.+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++++|||++++++++.+....+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 357899999999999999999664 5788999999876666678889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++.... ..+++.++..++.|++.|++|||+. +|+|+||+|+||++++++.++|+|||.+....... .
T Consensus 82 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~ 156 (262)
T cd06613 82 CGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-A 156 (262)
T ss_pred CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhh-h
Confidence 99999999987653 4689999999999999999999999 99999999999999999999999999998654321 1
Q ss_pred cccCccccccccccccccCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 933 ATTDVAGTFGYVAPEYATTC---RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~---~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......++..|+|||.+.+. .++.++||||+|+++|||++|+.||...... ...... ...... +
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~--------~~~~~~-~~~~~~----~ 223 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM--------RALFLI-SKSNFP----P 223 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHH-HhccCC----C
Confidence 22334678899999999876 7889999999999999999999999742211 111111 111000 0
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.. ...+...+..+.+++.+||+.+|.+||++.+++.
T Consensus 224 ~~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 224 PK-LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred cc-ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 0112334567899999999999999999999875
No 218
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.5e-33 Score=306.10 Aligned_cols=256 Identities=22% Similarity=0.338 Sum_probs=205.7
Q ss_pred CCCcccceeeecCceEEEEEEec------CCeEEEEEEeccCchh-hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV------PGYLVAVKKLSIGRFQ-GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 847 (1052)
++|++.+.||+|+||.||+|..+ +...|++|.+...... ..+.+.+|++++++++|+|++++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56889999999999999999754 2467999988654433 3567899999999999999999999999989999
Q ss_pred EEEeecCCCCHHHHHhhccC-------CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEec
Q 001562 848 LVYNFLSGGNLETFIHKKSG-------KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDF 920 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Df 920 (1052)
+||||+++|+|.++++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999986542 2589999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHH
Q 001562 921 GLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIK 999 (1052)
Q Consensus 921 gla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
|++...............++..|+|||.+.+..++.++||||+|+++|||++ |..||..... ...... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~--------~~~~~~-~~ 232 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD--------EEVLNR-LQ 232 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--------HHHHHH-HH
Confidence 9987554333333344466788999999998888999999999999999999 7778753211 111111 11
Q ss_pred hCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 1000 EGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 1000 ~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
.+.... ..+...+..+.+++.+|++.+|++||++.|+++.|.+
T Consensus 233 ~~~~~~--------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 233 AGKLEL--------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred cCCcCC--------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 111111 0112234569999999999999999999999998863
No 219
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=7e-33 Score=309.45 Aligned_cols=257 Identities=23% Similarity=0.373 Sum_probs=200.8
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
++|++.+.||+|+||.||+|... ++..+|+|.+.... .....++.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36899999999999999999654 57889999886542 23346688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.++++.. ..+++..+..++.|+++|++|||+.+ +++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 153 (308)
T cd06615 81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 153 (308)
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc---
Confidence 9999999999765 46889999999999999999999742 8999999999999999999999999998754322
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCC-------------------------
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNG------------------------- 987 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~------------------------- 987 (1052)
......++..|+|||.+.+..++.++||||||+++|||++|+.||..........
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (308)
T cd06615 154 MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDS 233 (308)
T ss_pred ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCc
Confidence 1233467889999999988889999999999999999999999986432110000
Q ss_pred ---cchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 988 ---FNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 988 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
....+..+...... .+.+. .......+.+++.+|++.+|++||++.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 234 PRPMAIFELLDYIVNEP------PPKLP---SGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred cchhhHHHHHHHHhcCC------CccCc---CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000000000 00000 01134458999999999999999999999864
No 220
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.2e-33 Score=308.11 Aligned_cols=253 Identities=25% Similarity=0.417 Sum_probs=204.6
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
.++|++.+.||.|+||.||+|... ++..||+|.+........+.+..|++++++++|||++++++++.++...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356999999999999999999764 5889999999877666677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++.... ..+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||.+....... .
T Consensus 84 ~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~ 158 (280)
T cd06611 84 CDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-Q 158 (280)
T ss_pred cCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccc-c
Confidence 99999999987653 5689999999999999999999999 99999999999999999999999999987543221 1
Q ss_pred cccCcccccccccccccc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc
Q 001562 933 ATTDVAGTFGYVAPEYAT-----TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF 1007 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~-----~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
......+++.|+|||.+. +..++.++||||+|+++|||++|+.||..... .+..... ..+.....
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~--------~~~~~~~-~~~~~~~~- 228 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP--------MRVLLKI-LKSEPPTL- 228 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH--------HHHHHHH-hcCCCCCc-
Confidence 223345788999999875 34467789999999999999999999874211 1111111 11111110
Q ss_pred cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1008 LPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1008 ~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
..+...+..+.+++.+||+.+|++||++.++++.
T Consensus 229 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 229 ------DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ------CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 1122334568899999999999999999999763
No 221
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5.8e-33 Score=302.62 Aligned_cols=248 Identities=28% Similarity=0.437 Sum_probs=203.9
Q ss_pred ceeeecCceEEEEEEecC----CeEEEEEEeccCchhh-HHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELVP----GYLVAVKKLSIGRFQG-IQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
+.||+|+||.||+|.... +..||+|.+....... .+++.+|++.++.++|+|++++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 468999999999997654 7889999987654433 67889999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcc-------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 856 GNLETFIHKKS-------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 856 gsL~~~l~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
++|.+++.... ...+++.++..++.|++.|++|||++ +|+||||+|+||++++++.++|+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999998752 35789999999999999999999999 999999999999999999999999999987654
Q ss_pred ccc-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 929 SET-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 929 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
... .......++..|+|||.+.+..++.++||||+|+++|||++ |..||... ...+..+.... +...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--------~~~~~~~~~~~-~~~~-- 226 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL--------SNEEVLEYLRK-GYRL-- 226 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC--------CHHHHHHHHHc-CCCC--
Confidence 321 22333457889999999998889999999999999999999 58888643 11222222221 1111
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
..+...+..+.+++.+|++.+|++||++.|+++.|+
T Consensus 227 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 -------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 112333556999999999999999999999999874
No 222
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.7e-33 Score=313.44 Aligned_cols=196 Identities=23% Similarity=0.414 Sum_probs=161.7
Q ss_pred cceeeecCceEEEEEEec---CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEec--CCeEEEEEeecC
Q 001562 780 RNLIGTGGFGSTYKAELV---PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVG--EAEMFLVYNFLS 854 (1052)
Q Consensus 780 ~~~Lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 854 (1052)
.++||+|+||+||+|... +++.||+|.+..... ...+.+|++++++++||||+++++++.. +...++||||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~- 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA- 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc-
Confidence 367999999999999754 467899998865432 2457789999999999999999999864 45689999999
Q ss_pred CCCHHHHHhhcc-------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE----CCCCcEEEEecccc
Q 001562 855 GGNLETFIHKKS-------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILL----DEELNAYLSDFGLA 923 (1052)
Q Consensus 855 ~gsL~~~l~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill----~~~~~~kl~Dfgla 923 (1052)
+++|.+++.... ...+++..+..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 568988876432 23588999999999999999999999 99999999999999 45678999999999
Q ss_pred cccccccc--ccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCc
Q 001562 924 RLLEVSET--HATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSF 981 (1052)
Q Consensus 924 ~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~ 981 (1052)
+....... .......+|+.|+|||++.+. .++.++||||+||++|||++|++||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 87643221 122345789999999999774 57889999999999999999999997543
No 223
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=313.10 Aligned_cols=243 Identities=31% Similarity=0.412 Sum_probs=203.9
Q ss_pred CcccceeeecCceEEEEEE-ecCCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 777 FSIRNLIGTGGFGSTYKAE-LVPGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
|+-.+-||.|+||.||.|. ..+.+.||||++.-... +.+.++..|+.++++++|||.|.+-|+|..+...|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 5566789999999999994 45688999999965433 3477899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
| -|+-.|.+.-+. +++.+.++..|..+.+.||+|||+. +.||||||+.|||+++.|.||++|||.|.+..+
T Consensus 108 C-lGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P---- 178 (948)
T KOG0577|consen 108 C-LGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAP---- 178 (948)
T ss_pred H-hccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCc----
Confidence 9 678899887765 7899999999999999999999999 999999999999999999999999999986643
Q ss_pred cccCcccccccccccccc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 933 ATTDVAGTFGYVAPEYAT---TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~---~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
...++|||.|||||++. .+.|+-++||||+|++..|+.-.++|+... +... +-+-+..+..... -
T Consensus 179 -AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM--------NAMS-ALYHIAQNesPtL-q- 246 (948)
T KOG0577|consen 179 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM--------NAMS-ALYHIAQNESPTL-Q- 246 (948)
T ss_pred -hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc--------hHHH-HHHHHHhcCCCCC-C-
Confidence 34578999999999985 467899999999999999999999997622 1111 2333444433322 1
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+....+..++..|++.-|.+|||.+++++
T Consensus 247 ------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 247 ------SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred ------CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 3445566999999999999999999999875
No 224
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.3e-33 Score=304.79 Aligned_cols=252 Identities=23% Similarity=0.371 Sum_probs=201.7
Q ss_pred CCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 775 GNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
++|++.+.||+|+||.||+|.. .+++.||+|.++.........+.+|+.+++.++|||++++++++.+++..++|+||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 4688899999999999999965 468899999987665555567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++++|.+++... ..+++.++..++.|++.|+.|||+. +|+|+||||+||+++.++.++|+|||++...... ...
T Consensus 89 ~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-~~~ 162 (267)
T cd06645 89 GGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT-IAK 162 (267)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc-ccc
Confidence 999999998765 4689999999999999999999999 9999999999999999999999999998765422 122
Q ss_pred ccCcccccccccccccc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 934 TTDVAGTFGYVAPEYAT---TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~---~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
.....|+..|+|||.+. ...++.++||||+||++|||++|+.||....+. ....... ..... +.
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~--------~~~~~~~-~~~~~----~~ 229 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM--------RALFLMT-KSNFQ----PP 229 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch--------hhHHhhh-ccCCC----CC
Confidence 23456889999999874 455788999999999999999999998643211 0011111 11111 10
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
... .....+..+.+++.+|++.+|++||+++++++
T Consensus 230 ~~~-~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 230 KLK-DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ccc-ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 000 01122345889999999999999999999875
No 225
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4e-33 Score=315.25 Aligned_cols=257 Identities=26% Similarity=0.432 Sum_probs=204.2
Q ss_pred hCCCcccceeeecCceEEEEEEec--------CCeEEEEEEeccCc-hhhHHHHHHHHHHhccC-CcCceeeEEEEEecC
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV--------PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGE 843 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 843 (1052)
..+|++.+.||+|+||.||+|... .+..||+|.+.... ....+++.+|+++++++ +||||+++++++.++
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 346899999999999999999642 12468999886543 33456889999999999 799999999999999
Q ss_pred CeEEEEEeecCCCCHHHHHhhcc--------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE
Q 001562 844 AEMFLVYNFLSGGNLETFIHKKS--------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILL 909 (1052)
Q Consensus 844 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill 909 (1052)
+..++++||+++|+|.+++.... ...+++.++.+++.|++.|++|||+. +|+||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEE
Confidence 99999999999999999997642 23578899999999999999999999 99999999999999
Q ss_pred CCCCcEEEEeccccccccccccc-cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCC
Q 001562 910 DEELNAYLSDFGLARLLEVSETH-ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNG 987 (1052)
Q Consensus 910 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~ 987 (1052)
++++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~------- 240 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI------- 240 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC-------
Confidence 99999999999999865432211 1122234568999999999999999999999999999998 77877532
Q ss_pred cchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 988 FNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
...++.+.. ..+... ..+......+.+++.+||+.+|++||++.|+++.|+++
T Consensus 241 -~~~~~~~~~-~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~ 293 (334)
T cd05100 241 -PVEELFKLL-KEGHRM---------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293 (334)
T ss_pred -CHHHHHHHH-HcCCCC---------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 122222222 111111 11223344688999999999999999999999999875
No 226
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=5.7e-33 Score=304.26 Aligned_cols=248 Identities=27% Similarity=0.420 Sum_probs=194.9
Q ss_pred ceeeecCceEEEEEEecC-Ce--EEEEEEeccCc-hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELVP-GY--LVAVKKLSIGR-FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
+.||+|+||.||+|.... +. .+|+|.++... ....+.+..|++++.++ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999997653 33 56888876432 34456788999999999 799999999999999999999999999
Q ss_pred CCHHHHHhhcc--------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecc
Q 001562 856 GNLETFIHKKS--------------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFG 921 (1052)
Q Consensus 856 gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfg 921 (1052)
|+|.+++.... ...++++++..++.|++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 99999997542 13478999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHh
Q 001562 922 LARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKE 1000 (1052)
Q Consensus 922 la~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
++...... ........+..|+|||++.+..++.++||||||+++|||++ |..||.... ..+..+.. ..
T Consensus 158 l~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~--------~~~~~~~~-~~ 226 (270)
T cd05047 158 LSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--------CAELYEKL-PQ 226 (270)
T ss_pred Cccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC--------HHHHHHHH-hC
Confidence 98632211 11111233567999999988889999999999999999997 999986321 11112211 11
Q ss_pred CCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1001 GRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1001 ~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
+... ..+......+.+++.+||+.+|.+||++.|+++.|+++
T Consensus 227 ~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 227 GYRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred CCCC---------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 1111 11122334588999999999999999999999999875
No 227
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.4e-33 Score=307.69 Aligned_cols=264 Identities=25% Similarity=0.401 Sum_probs=208.3
Q ss_pred CCCcccceeeecCceEEEEEEec-----CCeEEEEEEeccCchh-hHHHHHHHHHHhccCCcCceeeEEEEEec--CCeE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-----PGYLVAVKKLSIGRFQ-GIQQFDAEIGTLGRIRHKNLVTLIGYYVG--EAEM 846 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 846 (1052)
+.|++.+.||+|+||.||+|.+. ++..||||++...... ..+++.+|++++++++|+|++++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45788899999999999999753 3688999998765443 46789999999999999999999999887 5578
Q ss_pred EEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccc
Q 001562 847 FLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLL 926 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~ 926 (1052)
++||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999999997754 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred cccccc--cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCC-------CcchHHHHHHH
Q 001562 927 EVSETH--ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGN-------GFNIVSWAKLL 997 (1052)
Q Consensus 927 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~-------~~~~~~~~~~~ 997 (1052)
...... ......++..|+|||.+.+..++.++||||||+++|||++|+.|+......... ......+.. .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 238 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE-L 238 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH-H
Confidence 532211 111233456799999999888999999999999999999999998643322100 001111111 1
Q ss_pred HHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 001562 998 IKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQLK 1052 (1052)
Q Consensus 998 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ik 1052 (1052)
....... ..+..++..+.+++.+||+.+|++||++.|++++|++++
T Consensus 239 ~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 239 LKEGERL---------PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HHcCCcC---------CCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 1111110 112233456999999999999999999999999999874
No 228
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=7.6e-33 Score=302.47 Aligned_cols=250 Identities=25% Similarity=0.437 Sum_probs=201.4
Q ss_pred CCcccceeeecCceEEEEEEecCCeEEEEEEeccCch------hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRF------QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
+|++.+.||+|+||+||+|...+++.+|+|.+..... .....+.+|++++++++|+|++++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4788899999999999999887899999998864321 2245688899999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
+||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+|+||+|+||++++++.++|+|||.+......
T Consensus 81 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 9999999999999764 3578999999999999999999999 9999999999999999999999999998765321
Q ss_pred c-----cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcc
Q 001562 930 E-----THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSS 1004 (1052)
Q Consensus 930 ~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
. ........++..|+|||.+.+..++.++||||+|+++|||++|+.||..... ............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~~~-- 225 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR--------LAAMFYIGAHRG-- 225 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh--------HHHHHHhhhccC--
Confidence 1 1112234678899999999998899999999999999999999999963211 111111111100
Q ss_pred ccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1005 ELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1005 ~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+.+ +......+.+++.+||+.+|++||++.|+++
T Consensus 226 --~~~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 226 --LMPRL----PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred --CCCCC----CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11122 2223445889999999999999999999875
No 229
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.5e-33 Score=302.44 Aligned_cols=248 Identities=28% Similarity=0.397 Sum_probs=200.2
Q ss_pred ceeeecCceEEEEEEecCCeEEEEEEeccCchh-hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCHH
Q 001562 781 NLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQ-GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNLE 859 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 859 (1052)
++||+|+||.||+|....++.||+|.+...... ....+.+|+++++++.|+||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 468999999999998776999999988765443 4568899999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc-cCcc
Q 001562 860 TFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT-TDVA 938 (1052)
Q Consensus 860 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~-~~~~ 938 (1052)
+++.... ..+++..+..++.++++|++|||++ +++||||+|+||+++.++.++|+|||++........... ....
T Consensus 81 ~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (251)
T cd05041 81 TFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ 156 (251)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence 9997653 4688999999999999999999999 999999999999999999999999999986542211111 1223
Q ss_pred ccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCH
Q 001562 939 GTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQ 1017 (1052)
Q Consensus 939 g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 1017 (1052)
.+..|+|||.+.+..++.++|+||+|+++|||+| |..||...... .... ........ ..+.
T Consensus 157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--------~~~~-~~~~~~~~---------~~~~ 218 (251)
T cd05041 157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--------QTRE-RIESGYRM---------PAPQ 218 (251)
T ss_pred ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--------HHHH-HHhcCCCC---------CCCc
Confidence 4567999999998889999999999999999999 77777533211 1111 11111100 1122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 1018 ENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 1018 ~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
..+..+.+++.+|++.+|++||++.|+++.|+.
T Consensus 219 ~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 219 LCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred cCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 334569999999999999999999999998863
No 230
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=296.52 Aligned_cols=249 Identities=25% Similarity=0.413 Sum_probs=208.4
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecC
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
-|.++++||+|+||.||+|.++ .|+.+|+|++... .+.+++..|+.+|++...|+||++||.|.....+++|||||.
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 3778899999999999999654 6999999988654 346788999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT 934 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 934 (1052)
.|++.+.++.++ ++++++++..+....++|++|||.. .-+|||||+.|||+..+|.+|++|||.|..+... -...
T Consensus 112 AGSiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT-MAKR 186 (502)
T KOG0574|consen 112 AGSISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT-MAKR 186 (502)
T ss_pred CCcHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhh-HHhh
Confidence 999999998765 8999999999999999999999999 8899999999999999999999999999866422 2234
Q ss_pred cCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcC
Q 001562 935 TDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEA 1014 (1052)
Q Consensus 935 ~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1014 (1052)
..+.|||.|||||++..-.|..++||||+|+...||..|++||...-+-. +-..+..+.....-
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR---------AIFMIPT~PPPTF~------- 250 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR---------AIFMIPTKPPPTFK------- 250 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc---------eeEeccCCCCCCCC-------
Confidence 55789999999999999999999999999999999999999987432211 01111122222221
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1015 GPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1015 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
.|+....++.++++.|+-..|++|-|+.++++.
T Consensus 251 KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 251 KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 234445568999999999999999999988763
No 231
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.7e-36 Score=328.98 Aligned_cols=366 Identities=27% Similarity=0.348 Sum_probs=216.1
Q ss_pred CCCCCeeEecCCCcee-cCCCCccCCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCccccCCCCCcEE
Q 001562 122 LTELRTLSVPHNSFSG-EIPAGVGELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGNGELSVI 200 (1052)
Q Consensus 122 l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 200 (1052)
|+..+-.|+++|.|+| ..|.....+++++.|-|...++. .+|..++.+.+|++|.+++|++. .+-..+..++.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 3344555555555552 45555555555555555555555 55555555555555555555555 444455555555555
Q ss_pred EccCCcccC-ccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEEEccCCC
Q 001562 201 DMSSNRLSG-GLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVLDVSRNS 279 (1052)
Q Consensus 201 ~L~~N~l~~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 279 (1052)
++..|++.. .||. .+..+..|+.||||+|+++ ..|..+..-+++-.|+|++|+|..+.-..|-+++.|-.||||+|+
T Consensus 84 ~~R~N~LKnsGiP~-diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPT-DIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred hhhccccccCCCCc-hhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccch
Confidence 555555542 2332 2334566666666666666 366677777777777777777763333345567777777777777
Q ss_pred CCCCCCcccccCCCCCeeecccCcccccCCCCCCccccccCCCchhhhcccCCcEeecCCCCCc-ccCCccccCCCCccE
Q 001562 280 LTDRIPVELADCSKLSVLVLTNIDASLDLDNSRGEFSAFDGGVPYELLLSRSLEVLWAPRANLG-GRLPDNWSESCSLKV 358 (1052)
Q Consensus 280 l~~~~p~~l~~l~~L~~L~L~~n~~~~~l~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~n~l~-~~~p~~~~~~~~L~~ 358 (1052)
+. .+|+.+..+..|++|.|++|++.. |. ...+.++++|++|++++.+-+ ..+|..+..+.+|..
T Consensus 162 Le-~LPPQ~RRL~~LqtL~Ls~NPL~h--------fQ------LrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~d 226 (1255)
T KOG0444|consen 162 LE-MLPPQIRRLSMLQTLKLSNNPLNH--------FQ------LRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRD 226 (1255)
T ss_pred hh-hcCHHHHHHhhhhhhhcCCChhhH--------HH------HhcCccchhhhhhhcccccchhhcCCCchhhhhhhhh
Confidence 76 466677777777777777765431 00 011122334444444443322 344555555555555
Q ss_pred EeCCCCcccccCCccccccCCCCEEeCCCCcCccCCCCCCCCCccceEecccCccccCCCCCccccccccCCcccccccc
Q 001562 359 LNLGQNSLKGAVPKSLGMCRNLTYLDLSLNNLEGYLPMQLPVPCMVYFNVSQNNITGVLPRFENVSCDNHFGFQDLQYAN 438 (1052)
Q Consensus 359 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~l~~~~ 438 (1052)
+|||.|.+. .+|+.+-++++|+.|+||+|+|+..- .
T Consensus 227 vDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~-----------------------~-------------------- 262 (1255)
T KOG0444|consen 227 VDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELN-----------------------M-------------------- 262 (1255)
T ss_pred ccccccCCC-cchHHHhhhhhhheeccCcCceeeee-----------------------c--------------------
Confidence 555555555 55555555555555555555554210 0
Q ss_pred ccccCcccccceeeeeeccCCccccccCcccccccccccccchhHHhhccCCcccCCCCCccccccCCCcceEEecCccc
Q 001562 439 VPVMGSISDENFVIIHDFSGNKFLGSLPLFAIGDGFLAAKYKPHYRLLLNNNMFNGSVPGERISKCNDLQSFSVNLSANL 518 (1052)
Q Consensus 439 ~~~~~~~~~~~~l~~l~ls~n~~~g~~p~~~~~~~~~~~~~~~~~~l~l~~n~~~~~~p~~~~~~~~~l~~~~l~l~~n~ 518 (1052)
T Consensus 263 -------------------------------------------------------------------------------- 262 (1255)
T KOG0444|consen 263 -------------------------------------------------------------------------------- 262 (1255)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccchHHHHhcCCCceEEEccCcccccccccccCCCCCCCEEEccCCcCCC-CCchhhcCcccCcEEEcCCCccCCcCc
Q 001562 519 LSGMSYEAFLLDCVQLVEFEAANNQISGSIAAGVGKLMKLQRLDLRGNRVSG-SLPDELGKLKFLKWILLGGNNLTGEIP 597 (1052)
Q Consensus 519 l~~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p 597 (1052)
.. ....+|+.|+|+.|+++ ..|++++++++|+.|++.+|+++- -+|..+++|.+|+.+..++|++. ..|
T Consensus 263 ----~~----~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVP 332 (1255)
T KOG0444|consen 263 ----TE----GEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVP 332 (1255)
T ss_pred ----cH----HHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCc
Confidence 00 11246677777777777 677777777777777777777652 35666777777777777777766 666
Q ss_pred hhhcCCcCCcEEEcCCCCCCCCCcchhcccccccceeccCCcCC
Q 001562 598 SQFGHLISLVVLDLSHNALTGSIPASLTKATKLESLFLAHNRLS 641 (1052)
Q Consensus 598 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 641 (1052)
+.++.+.+|+.|.|++|++. .+|+.+.-|+.|+.|||.+|.--
T Consensus 333 EglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 333 EGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred hhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc
Confidence 66776777777777777665 56666666666666666666544
No 232
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.9e-33 Score=315.89 Aligned_cols=255 Identities=22% Similarity=0.309 Sum_probs=198.7
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.++||+|+||+||++... +++.||+|++.... ......+.+|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36899999999999999999765 47889999985422 222345788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 9999999999997643 4689999999999999999999999 99999999999999999999999999997654333
Q ss_pred cccccCcccccccccccccc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 931 THATTDVAGTFGYVAPEYAT-----TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
........|++.|+|||++. ...++.++|||||||++|||++|+.||... +..+....+..... ..
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~--------~~~~~~~~i~~~~~-~~ 227 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE--------SLVETYGKIMNHKE-RF 227 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC--------CHHHHHHHHhCCCc-cc
Confidence 33333457899999999986 345788999999999999999999999732 22222222222111 00
Q ss_pred cccchhhcCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 001562 1006 LFLPELWEAGPQENLLGMMRLASTCTVETLST--RPSVKQVLIK 1047 (1052)
Q Consensus 1006 ~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~--RPs~~eil~~ 1047 (1052)
. .+. ........+.+++.+|++.++++ |++++|+++.
T Consensus 228 ~-~p~----~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 228 Q-FPA----QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred c-CCC----ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0 011 11223455888999988765554 6889988753
No 233
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.5e-33 Score=308.66 Aligned_cols=259 Identities=25% Similarity=0.370 Sum_probs=197.5
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+|++.+.||+|++|.||+|... +++.||+|++..... .....+.+|+.++++++|||++++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4788899999999999999764 689999999865432 2346778899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 853 LSGGNLETFIHKKS-GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
++ ++|.+++.... +..+++..+..++.|+++|++|||+. +|+||||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 96 68999987643 35689999999999999999999999 99999999999999999999999999997654221
Q ss_pred ccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccc-----
Q 001562 932 HATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE----- 1005 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 1005 (1052)
.......+++.|+|||.+.+. .++.++||||+|+++|||+||+.||....... .........+....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 228 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-------QLFRIFRILGTPTEDVWPG 228 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-------HHHHHHHHhCCCChhhhhc
Confidence 222233568899999988754 46889999999999999999999997432210 00000000000000
Q ss_pred ------------cccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1006 ------------LFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1006 ------------~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
................++.+++.+|++.||++|||+.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 229 VTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred chhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000001123445789999999999999999999875
No 234
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=6.9e-33 Score=301.43 Aligned_cols=251 Identities=28% Similarity=0.460 Sum_probs=203.8
Q ss_pred CcccceeeecCceEEEEEEecC-----CeEEEEEEeccCchh-hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 777 FSIRNLIGTGGFGSTYKAELVP-----GYLVAVKKLSIGRFQ-GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
+++.+.||+|+||.||+|.... +..||+|++...... ..+.+..|+++++.++|+|++++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 4567899999999999997653 388999998765443 5678899999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++++|.+++.......+++.++..++.|++.|++|||+. +++||||+|+||++++++.++|+|||++.......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 999999999999876533389999999999999999999999 99999999999999999999999999998765443
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
........+++.|+|||.+.+..++.++||||+|+++|||++ |..||... ......+.... +...
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~--------~~~~~~~~~~~-~~~~----- 223 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM--------SNEEVLEYLKK-GYRL----- 223 (258)
T ss_pred ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHhc-CCCC-----
Confidence 332222346789999999988889999999999999999998 77777531 11222222221 1111
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKL 1048 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L 1048 (1052)
..+...+..+.+++.+|+..+|++|||+.|+++.|
T Consensus 224 ----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 ----PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ----CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11122345689999999999999999999998864
No 235
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.5e-33 Score=314.91 Aligned_cols=254 Identities=22% Similarity=0.306 Sum_probs=198.5
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||+||+|+.. +++.||+|++.... ......+.+|..+++.++|++|+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46899999999999999999765 57889999986422 223455788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999998643 4688999999999999999999999 99999999999999999999999999998665433
Q ss_pred cccccCccccccccccccccC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 931 THATTDVAGTFGYVAPEYATT-----CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~-----~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
........|++.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+.......... ..
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~--------~~~~~~~i~~~~~-~~ 227 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES--------LVETYGKIMNHEE-RF 227 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC--------HHHHHHHHHcCCC-cc
Confidence 333334568999999999876 457889999999999999999999997421 1222222221111 00
Q ss_pred cccchhhcCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 001562 1006 LFLPELWEAGPQENLLGMMRLASTCTVETLST--RPSVKQVLI 1046 (1052)
Q Consensus 1006 ~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~--RPs~~eil~ 1046 (1052)
.+ +... ...+..+.+++.+|++.++++ |++++++++
T Consensus 228 ~~-p~~~----~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 228 QF-PSHI----TDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred cC-CCcc----ccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 01 1111 122445888999999876554 467887764
No 236
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.3e-33 Score=318.84 Aligned_cols=257 Identities=24% Similarity=0.321 Sum_probs=196.1
Q ss_pred hhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecC------
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE------ 843 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 843 (1052)
..++|++.+.||+|+||.||+|.. ..++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 346899999999999999999965 458899999986532 23346678899999999999999999987643
Q ss_pred CeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccc
Q 001562 844 AEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLA 923 (1052)
Q Consensus 844 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla 923 (1052)
...|+||||++ +++.+++.. .+++..+..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 35799999995 578887753 378899999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCc
Q 001562 924 RLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRS 1003 (1052)
Q Consensus 924 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
+..... .......+++.|+|||++.+..++.++||||+||++|||++|+.||...... ..+.+.....+..
T Consensus 174 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-------~~~~~~~~~~~~~ 244 (364)
T cd07875 174 RTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-------DQWNKVIEQLGTP 244 (364)
T ss_pred cccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHHhcCCC
Confidence 865422 2223456889999999999999999999999999999999999999643211 1111111100000
Q ss_pred cc--------------------------cccchhh----cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1004 SE--------------------------LFLPELW----EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1004 ~~--------------------------~~~~~l~----~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.. ...+... ..........+.+++.+|++.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 245 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred CHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00 0000000 0001112346889999999999999999999986
No 237
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=6.5e-33 Score=301.32 Aligned_cols=249 Identities=24% Similarity=0.391 Sum_probs=204.8
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+|++.+.||+|+||.||++.. .+|+.||+|++.... .....++.+|+.++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 488899999999999999955 468899999986432 33456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++.......+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~- 156 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE- 156 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-
Confidence 9999999999876555688999999999999999999999 999999999999999999999999999986543221
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
......+++.|+|||+..+..++.++||||||+++|||++|+.||.... ..+......... ..
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~--------~~~~~~~~~~~~-~~-------- 219 (256)
T cd08218 157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN--------MKNLVLKIIRGS-YP-------- 219 (256)
T ss_pred hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC--------HHHHHHHHhcCC-CC--------
Confidence 1223457889999999999889999999999999999999999986321 122222222211 11
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+......+.+++.+||+.+|++||++.|+++
T Consensus 220 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 220 -PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred -CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 112233456899999999999999999999986
No 238
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=6.6e-33 Score=312.52 Aligned_cols=198 Identities=21% Similarity=0.333 Sum_probs=166.2
Q ss_pred ccceeeec--CceEEEEEEe-cCCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 779 IRNLIGTG--GFGSTYKAEL-VPGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 779 ~~~~Lg~G--~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
+.++||+| +|++||++.. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 56789999 6889999965 468999999986543 223456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc--
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET-- 931 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~-- 931 (1052)
++|+|.+++.......+++..+.+++.|++.|++|||++ +|+||||||+||+++.++.++++||+.+........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999999999776555689999999999999999999999 999999999999999999999999986543321110
Q ss_pred ----ccccCccccccccccccccC--CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 001562 932 ----HATTDVAGTFGYVAPEYATT--CRVSDKADVYSFGVVLLELISGKRSLDP 979 (1052)
Q Consensus 932 ----~~~~~~~g~~~y~aPE~~~~--~~~~~~sDv~slG~il~elltg~~p~~~ 979 (1052)
.......++..|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 01112346678999999976 4588999999999999999999999963
No 239
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=4.8e-33 Score=301.93 Aligned_cols=247 Identities=29% Similarity=0.493 Sum_probs=200.5
Q ss_pred CCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecC
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
++|++.+.||+|+||.||+|.. .++.||+|.+.... ..+.+.+|+.++++++|||++++++++..+ ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4588999999999999999975 57889999986543 236788999999999999999999998754 4799999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT 934 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 934 (1052)
+++|.+++.......+++..+.+++.|++.|+.|||+. +++||||||+||+++.++.++|+|||.+...... .
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----~ 154 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----V 154 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc----C
Confidence 99999999876555689999999999999999999998 9999999999999999999999999998754321 1
Q ss_pred cCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhc
Q 001562 935 TDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWE 1013 (1052)
Q Consensus 935 ~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1013 (1052)
.....+..|+|||.+.+..++.++||||+|+++|||++ |+.||.... ..+.... ...+....
T Consensus 155 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--------~~~~~~~-~~~~~~~~-------- 217 (254)
T cd05083 155 DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS--------LKEVKEC-VEKGYRME-------- 217 (254)
T ss_pred CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC--------HHHHHHH-HhCCCCCC--------
Confidence 12234568999999998899999999999999999998 888886321 1122222 22221111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 1014 AGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 1014 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
.+...+..+.+++.+||+.+|++||+++++++.|++
T Consensus 218 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 218 -PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 112334568899999999999999999999998864
No 240
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=7e-33 Score=303.29 Aligned_cols=253 Identities=23% Similarity=0.349 Sum_probs=199.7
Q ss_pred hhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
+.+.+.....||+|+||.||+|... ++..||+|.+........+.+.+|++++++++|+||+++++++..++..++|+|
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 85 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFME 85 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEe
Confidence 3445555678999999999999654 578899999877766667789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCc--cHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECC-CCcEEEEeccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKI--QWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDE-ELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~-~~~~kl~Dfgla~~~~~ 928 (1052)
|+++++|.+++.... ..+ ++..+..++.|++.|++|||++ +|+||||||+||+++. ++.++|+|||.+.....
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~ 161 (268)
T cd06624 86 QVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG 161 (268)
T ss_pred cCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence 999999999998653 234 7888899999999999999999 9999999999999976 67899999999876542
Q ss_pred cccccccCccccccccccccccCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTCR--VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
... ......+++.|+|||.+.+.. ++.++||||+|+++|||++|+.||...... ....+..... .
T Consensus 162 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~-----~~~~~~~~~~---~---- 228 (268)
T cd06624 162 INP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP-----QAAMFKVGMF---K---- 228 (268)
T ss_pred CCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh-----hhhHhhhhhh---c----
Confidence 221 222345788999999986643 788999999999999999999998632111 0011110000 0
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+ ..+......+.+++.+||+.+|++||++.|+++
T Consensus 229 ~~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 229 IHP----EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred cCC----CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 011 122334456889999999999999999999875
No 241
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.6e-34 Score=306.25 Aligned_cols=255 Identities=25% Similarity=0.424 Sum_probs=202.0
Q ss_pred HHhhCCCcccceeeecCceEEEEEEecCCeEEEEEEecc--CchhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEE
Q 001562 771 VRATGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSI--GRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 771 ~~~~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 847 (1052)
.+....|++.++||+||.++||++...+.+.||+|++.. .+.+...-|..|+..|.++ .|.+||++++|-..++..|
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY 436 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY 436 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE
Confidence 344567999999999999999999888788899987743 3455577899999999999 5999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+|||+= ..+|..+|+.......+| .+..+..|++.|+.+.|.. ||||.|+||.|+++-.. .+||+|||.|..+.
T Consensus 437 mvmE~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVkG-~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 437 MVMECG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVKG-RLKLIDFGIANAIQ 510 (677)
T ss_pred EEeecc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEee-eEEeeeechhcccC
Confidence 999976 679999999876544445 7788999999999999999 99999999999999875 99999999999887
Q ss_pred ccccc-cccCccccccccccccccCCC-----------CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHH
Q 001562 928 VSETH-ATTDVAGTFGYVAPEYATTCR-----------VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAK 995 (1052)
Q Consensus 928 ~~~~~-~~~~~~g~~~y~aPE~~~~~~-----------~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 995 (1052)
...+. .....+||+.||+||++.... .++++||||+|||+|+|+.|++||.... -.|.+
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~---------n~~aK 581 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII---------NQIAK 581 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH---------HHHHH
Confidence 55433 334568999999999985432 4578999999999999999999997211 12233
Q ss_pred HHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 996 LLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 996 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...-....++.-.|.+ +.. .+++++++.|++.||++||++.|+++
T Consensus 582 l~aI~~P~~~Iefp~~----~~~--~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 582 LHAITDPNHEIEFPDI----PEN--DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HHhhcCCCccccccCC----CCc--hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 2222221121111111 211 12899999999999999999999986
No 242
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.9e-33 Score=320.81 Aligned_cols=259 Identities=24% Similarity=0.295 Sum_probs=198.4
Q ss_pred hCCCcccceeeecCceEEEEEEec---CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV---PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
..+|++.+.||+|+||.||+|... .+..||+|.+... ....+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999643 3578999987543 23467999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
|++ .++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.++|+|||+++......
T Consensus 166 e~~-~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKY-KCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 999 57899998543 5789999999999999999999999 99999999999999999999999999998664332
Q ss_pred c-ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH----------
Q 001562 931 T-HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIK---------- 999 (1052)
Q Consensus 931 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 999 (1052)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+....+....
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~l~~i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKS-SSSQLRSIIRCMQVHPLEFPQNGS 318 (392)
T ss_pred ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCC-cHHHHHHHHHHhccCccccCCccc
Confidence 2 22234578999999999999999999999999999999999999997543221 11111111110000
Q ss_pred --------h-C--CccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1000 --------E-G--RSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1000 --------~-~--~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. . .......+.... .......+.+++++|+..||++||++.|++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIR--KYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhh--ccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 0 0 000000000000 0112345788999999999999999999985
No 243
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=8.3e-33 Score=303.33 Aligned_cols=239 Identities=24% Similarity=0.328 Sum_probs=187.6
Q ss_pred eeeecCceEEEEEEecC-------------------------CeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeE
Q 001562 782 LIGTGGFGSTYKAELVP-------------------------GYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTL 836 (1052)
Q Consensus 782 ~Lg~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 836 (1052)
.||+|+||.||+|.+.. ...||+|++..........+.+|+++++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999996421 14588998865554445678889999999999999999
Q ss_pred EEEEecCCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC---
Q 001562 837 IGYYVGEAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL--- 913 (1052)
Q Consensus 837 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~--- 913 (1052)
++++.+....++||||+++|+|..++.... ..+++..+.+++.|+++|++|||++ +|+||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCccc
Confidence 999999999999999999999999987643 4688999999999999999999999 999999999999997643
Q ss_pred ----cEEEEeccccccccccccccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHH-hCCCCCCCCcccCCCC
Q 001562 914 ----NAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELI-SGKRSLDPSFSEYGNG 987 (1052)
Q Consensus 914 ----~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~ell-tg~~p~~~~~~~~~~~ 987 (1052)
.++++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++||++ +|+.||......
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---- 228 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS---- 228 (274)
T ss_pred CccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH----
Confidence 3799999988643211 22346788999998875 56789999999999999995 688888633211
Q ss_pred cchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 988 FNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
... ........ . +......+.+++.+||+.+|++||++.++++.|+
T Consensus 229 -~~~----~~~~~~~~-------~----~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 229 -EKE----RFYEKKHR-------L----PEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred -HHH----HHHHhccC-------C----CCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 011 11111110 0 1111235889999999999999999999998874
No 244
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.3e-33 Score=315.39 Aligned_cols=237 Identities=25% Similarity=0.346 Sum_probs=188.4
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHH-HHhccCCcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEI-GTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
++||+|+||.||+|+.. +++.||+|++..... .....+..|. .+++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999764 588999999864322 2233444554 467889999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
++|.+++... ..+++..+..++.||++|++|||+. +|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~ 154 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP-EETTS 154 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCC-CCccc
Confidence 9999988754 4688899999999999999999999 9999999999999999999999999998753211 12233
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||.+.+..++.++||||+||++|||++|+.||.... ..+..+.... ... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~-~~~----------~~ 215 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD--------VSQMYDNILH-KPL----------QL 215 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC--------HHHHHHHHhc-CCC----------CC
Confidence 4568999999999999889999999999999999999999997421 2222222221 110 11
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSVK 1042 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~~ 1042 (1052)
+......+.+++.+|++.||++||++.
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 216 PGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 223344688999999999999999764
No 245
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=6.7e-33 Score=327.21 Aligned_cols=261 Identities=22% Similarity=0.242 Sum_probs=191.9
Q ss_pred HHHhhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccCC------cCceeeEEEEEec
Q 001562 770 VVRATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIR------HKNLVTLIGYYVG 842 (1052)
Q Consensus 770 ~~~~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~ 842 (1052)
+....++|++.++||+|+||+||+|.. ..++.||||+++.... ....+..|++++++++ |.+++++++++..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 344567899999999999999999965 4578899999864322 2344566777776664 4568899998875
Q ss_pred C-CeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEECCCC-------
Q 001562 843 E-AEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHY-SCVPRIVHRDIKPSNILLDEEL------- 913 (1052)
Q Consensus 843 ~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~iiHrDik~~Nill~~~~------- 913 (1052)
. ...|+|||++ +++|.+++... ..+++..+..++.||+.||+|||+ . +||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~~~ 276 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDPVT 276 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccccccc
Confidence 4 5789999988 88999998765 468999999999999999999997 5 999999999999998765
Q ss_pred ---------cEEEEeccccccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccC
Q 001562 914 ---------NAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEY 984 (1052)
Q Consensus 914 ---------~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~ 984 (1052)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+.....
T Consensus 277 ~~~~~~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~- 351 (467)
T PTZ00284 277 NRALPPDPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL- 351 (467)
T ss_pred ccccCCCCceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-
Confidence 49999999886432 2233457899999999999999999999999999999999999999743211
Q ss_pred CCCcchHHHHHHH--------------------HH-hCCccccccchhh----cCC---CHHHHHHHHHHHHHcccCCCC
Q 001562 985 GNGFNIVSWAKLL--------------------IK-EGRSSELFLPELW----EAG---PQENLLGMMRLASTCTVETLS 1036 (1052)
Q Consensus 985 ~~~~~~~~~~~~~--------------------~~-~~~~~~~~~~~l~----~~~---~~~~~~~l~~Li~~cl~~dP~ 1036 (1052)
.....+... +. .+......++.-. ... .......+.+|+.+|++.||+
T Consensus 352 ----~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~ 427 (467)
T PTZ00284 352 ----EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQ 427 (467)
T ss_pred ----HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChh
Confidence 111100000 00 0000000011000 000 001134578999999999999
Q ss_pred CCCCHHHHHH
Q 001562 1037 TRPSVKQVLI 1046 (1052)
Q Consensus 1037 ~RPs~~eil~ 1046 (1052)
+|||++|+++
T Consensus 428 ~R~ta~e~L~ 437 (467)
T PTZ00284 428 KRLNARQMTT 437 (467)
T ss_pred hCCCHHHHhc
Confidence 9999999986
No 246
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.9e-33 Score=303.99 Aligned_cols=255 Identities=24% Similarity=0.438 Sum_probs=204.3
Q ss_pred hCCCcccceeeecCceEEEEEEecC-C----eEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP-G----YLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~-~----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 847 (1052)
.++|++.+.||+|+||.||+|.... | ..||+|....... ....++.+|++.+++++|||++++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 3578899999999999999997542 3 3689998765543 335678899999999999999999999987 7889
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+|+||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||.++...
T Consensus 85 ~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 9999999999999998754 4589999999999999999999998 99999999999999999999999999998765
Q ss_pred cccccc-ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 928 VSETHA-TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 928 ~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
...... .....++..|+|||.+....++.++|+||||+++||+++ |+.||+... ..++.... ..+...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~-~~~~~~- 230 (279)
T cd05057 161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP--------AVEIPDLL-EKGERL- 230 (279)
T ss_pred CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC--------HHHHHHHH-hCCCCC-
Confidence 332211 122234568999999988889999999999999999999 999987432 12222222 222111
Q ss_pred cccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1006 LFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1006 ~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
..+..+...+.+++.+||..+|++||++.++++.|+++
T Consensus 231 --------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 231 --------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 11122334588999999999999999999999999874
No 247
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.1e-32 Score=303.21 Aligned_cols=248 Identities=25% Similarity=0.378 Sum_probs=203.8
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+.|+..+.||.|+||.||+|... ++..||+|.+.... ......+.+|+++++++.|||++++++++.++...++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 45778899999999999999764 58899999887543 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++.. ..+++.++..++.|++.|++|+|+. +++|+||+|+||+++.++.++|+|||++....... .
T Consensus 84 ~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~ 156 (277)
T cd06640 84 LGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-I 156 (277)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCc-c
Confidence 999999999865 3588999999999999999999999 99999999999999999999999999997654322 1
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
......++..|+|||.+.+..++.++|+||||+++|||++|..||....+. ...... ..+. .
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--------~~~~~~-~~~~---------~ 218 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM--------RVLFLI-PKNN---------P 218 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH--------hHhhhh-hcCC---------C
Confidence 223345788999999999888999999999999999999999998743221 111111 1111 1
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
...+...+..+.+++.+||+.+|++||++.++++.
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 219 PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 12234456679999999999999999999999753
No 248
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.2e-33 Score=309.71 Aligned_cols=261 Identities=21% Similarity=0.322 Sum_probs=198.1
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
++|++.+.||+|+||.||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++..+...++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46899999999999999999664 578999999865432 2335677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
++ ++|.+++.... ..+++..+..++.|+++|++|||+. +|+||||||+||++++++.++|+|||++....... .
T Consensus 86 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~ 159 (301)
T cd07873 86 LD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-K 159 (301)
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-C
Confidence 96 69999987653 4688999999999999999999999 99999999999999999999999999997543221 1
Q ss_pred cccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH------------H
Q 001562 933 ATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLI------------K 999 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------------~ 999 (1052)
......+++.|+|||.+.+. .++.++||||+||++|||++|+.||...... .......... .
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE-----EQLHFIFRILGTPTEETWPGILS 234 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHcCCCChhhchhhhc
Confidence 22234568899999988754 4788999999999999999999999743211 0110000000 0
Q ss_pred hCCccccccchhhc----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1000 EGRSSELFLPELWE----AGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1000 ~~~~~~~~~~~l~~----~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.......-.+.... .........+.+++.+|++.||.+|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 235 NEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000000000000 001123445889999999999999999999986
No 249
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.8e-33 Score=334.73 Aligned_cols=257 Identities=26% Similarity=0.374 Sum_probs=199.2
Q ss_pred HHHhhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEec--CC
Q 001562 770 VVRATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVG--EA 844 (1052)
Q Consensus 770 ~~~~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~ 844 (1052)
.....++|++.+.||+|+||+||+|... ++..||+|++.... ......+..|+.++++++||||++++++|.+ ..
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 3345568999999999999999999654 57789999886542 2345678899999999999999999998854 45
Q ss_pred eEEEEEeecCCCCHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhcCC----CCeeecCCCCCCEEECC-------
Q 001562 845 EMFLVYNFLSGGNLETFIHKKS--GKKIQWSVIHKIAIDIAQALAYLHYSCV----PRIVHRDIKPSNILLDE------- 911 (1052)
Q Consensus 845 ~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~----~~iiHrDik~~Nill~~------- 911 (1052)
.+|+||||+++|+|.+++.... ...+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 6899999999999999997632 3468999999999999999999998521 25999999999999964
Q ss_pred ----------CCcEEEEeccccccccccccccccCccccccccccccccC--CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 001562 912 ----------ELNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATT--CRVSDKADVYSFGVVLLELISGKRSLDP 979 (1052)
Q Consensus 912 ----------~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~sDv~slG~il~elltg~~p~~~ 979 (1052)
.+.+||+|||++...... .......|++.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~--s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIE--SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred ccccccccCCCCceEEccCCcccccccc--ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 234899999999865422 22234578999999999864 4578899999999999999999999963
Q ss_pred CcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 980 SFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.. ........+ ..+. .+. ....+..+.++|..||+.+|++||++.|+++
T Consensus 246 ~~-------~~~qli~~l-k~~p-------~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 246 AN-------NFSQLISEL-KRGP-------DLP---IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CC-------cHHHHHHHH-hcCC-------CCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 21 112222221 1111 000 0112345889999999999999999999984
No 250
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3e-33 Score=319.51 Aligned_cols=251 Identities=24% Similarity=0.342 Sum_probs=196.6
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++..++||+++++++.+.+.+..|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36889999999999999999664 58999999986432 233466788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999999999765 4689999999999999999999999 99999999999999999999999999987543110
Q ss_pred c----------------------------------ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCC
Q 001562 931 T----------------------------------HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRS 976 (1052)
Q Consensus 931 ~----------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p 976 (1052)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0 001134689999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 001562 977 LDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPS---VKQVLI 1046 (1052)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs---~~eil~ 1046 (1052)
|....+ .+..+.+... .....+.+. ......+.+++.+++ .||++|++ +.|+++
T Consensus 236 f~~~~~--------~~~~~~i~~~-~~~~~~p~~------~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 236 FCSETP--------QETYRKVMNW-KETLVFPPE------VPISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCCH--------HHHHHHHHcC-CCceecCCC------CCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 974322 1222222211 111111110 112345778888876 49999985 566553
No 251
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2e-32 Score=299.51 Aligned_cols=248 Identities=25% Similarity=0.445 Sum_probs=200.0
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchh---------hHHHHHHHHHHhccCCcCceeeEEEEEecCCe
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQ---------GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAE 845 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 845 (1052)
+|.+.+.||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 477889999999999999965 45789999988644221 13567889999999999999999999999999
Q ss_pred EEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccc
Q 001562 846 MFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARL 925 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~ 925 (1052)
.++|+||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999999765 4688999999999999999999999 999999999999999999999999999986
Q ss_pred cccccc-----ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHh
Q 001562 926 LEVSET-----HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKE 1000 (1052)
Q Consensus 926 ~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
...... .......++..|+|||.+.+..++.++||||+|+++|||++|+.||..... . ....... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~-~~~~~~~-~ 226 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ-------L-QAIFKIG-E 226 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH-------H-HHHHHHh-c
Confidence 642111 111223578899999999998899999999999999999999999974211 1 1111111 1
Q ss_pred CCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1001 GRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1001 ~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. ..+. .+...+..+.+++.+||+.||++||++.|+++
T Consensus 227 ~-----~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 N-----ASPE----IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred c-----CCCc----CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1 1111 12233456889999999999999999999976
No 252
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.8e-32 Score=300.24 Aligned_cols=251 Identities=23% Similarity=0.333 Sum_probs=189.5
Q ss_pred eeeecCceEEEEEEecC---CeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCC
Q 001562 782 LIGTGGFGSTYKAELVP---GYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGN 857 (1052)
Q Consensus 782 ~Lg~G~~g~V~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 857 (1052)
.||+|+||+||+|.... ...+|+|.+.... ......+.+|++.++.++|+||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999996543 3578888775433 2334678899999999999999999999999999999999999999
Q ss_pred HHHHHhhccC---CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc-c
Q 001562 858 LETFIHKKSG---KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH-A 933 (1052)
Q Consensus 858 L~~~l~~~~~---~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~ 933 (1052)
|.+++..... ...++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++......... .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 9999977542 2346788899999999999999999 9999999999999999999999999998754322211 1
Q ss_pred ccCccccccccccccccC-------CCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 934 TTDVAGTFGYVAPEYATT-------CRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~-------~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
.....++..|+|||+... ..++.++||||+||++|||++ |..||....+ .+.......... ..
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--------~~~~~~~~~~~~-~~ 229 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD--------EQVLKQVVREQD-IK 229 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH--------HHHHHHHhhccC-cc
Confidence 223345678999998743 356789999999999999999 6677753211 111222222221 11
Q ss_pred cccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 1006 LFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 1006 ~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
...+.. +......+.+++..|| .||++||+++|+++.+.
T Consensus 230 ~~~~~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 230 LPKPQL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCCcc----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 111222 2223345777888898 59999999999999874
No 253
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2e-32 Score=299.91 Aligned_cols=253 Identities=25% Similarity=0.441 Sum_probs=202.3
Q ss_pred CCcccceeeecCceEEEEEEecC--CeEEEEEEeccCc----------hhhHHHHHHHHHHhcc-CCcCceeeEEEEEec
Q 001562 776 NFSIRNLIGTGGFGSTYKAELVP--GYLVAVKKLSIGR----------FQGIQQFDAEIGTLGR-IRHKNLVTLIGYYVG 842 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 842 (1052)
.|++.+.||+|+||.||+|.... ++.+|+|.+.... .....++..|+.++.+ ++|||++++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999997654 6889999875321 2234557778888875 799999999999999
Q ss_pred CCeEEEEEeecCCCCHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEECCCCcEEEEe
Q 001562 843 EAEMFLVYNFLSGGNLETFIHKK--SGKKIQWSVIHKIAIDIAQALAYLHY-SCVPRIVHRDIKPSNILLDEELNAYLSD 919 (1052)
Q Consensus 843 ~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~iiHrDik~~Nill~~~~~~kl~D 919 (1052)
++..++||||+++++|.+++... ....+++..+++++.|++.|+.|||+ . +++||||+|+||++++++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEec
Confidence 99999999999999999988542 23568999999999999999999996 5 899999999999999999999999
Q ss_pred ccccccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 001562 920 FGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIK 999 (1052)
Q Consensus 920 fgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
||.+....... ......++..|+|||.+.+..++.++||||||+++|||++|+.||.... ..........
T Consensus 158 fg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~--------~~~~~~~~~~ 227 (269)
T cd08528 158 FGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN--------MLSLATKIVE 227 (269)
T ss_pred ccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC--------HHHHHHHHhh
Confidence 99998654332 3344568889999999999889999999999999999999999986321 1222222222
Q ss_pred hCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 1000 EGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 1000 ~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
.. ... . .....+..+.+++.+||+.||++||++.|+.+++++
T Consensus 228 ~~-~~~----~----~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 228 AV-YEP----L----PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred cc-CCc----C----CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 11 110 0 011223568899999999999999999999998863
No 254
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=3e-33 Score=289.61 Aligned_cols=263 Identities=24% Similarity=0.337 Sum_probs=215.3
Q ss_pred hhHHHhhCCCcccceeeecCceEEEEEEecC------CeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEE
Q 001562 768 DNVVRATGNFSIRNLIGTGGFGSTYKAELVP------GYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYY 840 (1052)
Q Consensus 768 ~~~~~~~~~~~~~~~Lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~ 840 (1052)
.++.....+++...++-+|.||.||.|.|++ .+.|.||.++.... -+...+..|.-.+....|||+..+.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 3455566778888899999999999996653 34566776654332 2356678899999999999999999998
Q ss_pred ecC-CeEEEEEeecCCCCHHHHHhhc------cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC
Q 001562 841 VGE-AEMFLVYNFLSGGNLETFIHKK------SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL 913 (1052)
Q Consensus 841 ~~~-~~~~lv~e~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~ 913 (1052)
.++ ...++++.++.-|+|..|+... ..+.++..+...++.|++.|++|||.. +|||.||.++|+++|+..
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQL 433 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhhe
Confidence 754 5678889999999999999832 245678889999999999999999999 999999999999999999
Q ss_pred cEEEEeccccccccccccccccC-ccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchH
Q 001562 914 NAYLSDFGLARLLEVSETHATTD-VAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIV 991 (1052)
Q Consensus 914 ~~kl~Dfgla~~~~~~~~~~~~~-~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~ 991 (1052)
++||+|=.+++...+.+++.-+. ...+.+||+||.+....|+.++|||||||++|||+| |+.|+..- +-.
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI--------DPf 505 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI--------DPF 505 (563)
T ss_pred eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc--------CHH
Confidence 99999999999999888876554 445779999999999999999999999999999999 88887632 222
Q ss_pred HHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 992 SWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
| +.....+|... ..|.+++.++..++.-||..+|++||+++|++.-|.++
T Consensus 506 E-m~~ylkdGyRl---------aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 506 E-MEHYLKDGYRL---------AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred H-HHHHHhcccee---------cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 3 33334444332 34667788899999999999999999999999887653
No 255
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.5e-32 Score=298.41 Aligned_cols=248 Identities=23% Similarity=0.378 Sum_probs=202.4
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+|++.+.||+|+||.||+|.. .+++.+|+|.+.... ......+..|++++++++|||++++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 488899999999999999955 468899999886542 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC-cEEEEecccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL-NAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~-~~kl~Dfgla~~~~~~~~ 931 (1052)
+++++|.+++....+..+++..+.+++.++++|++|||++ +|+||||+|+||++++++ .++++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 9999999999876656789999999999999999999999 999999999999998654 57999999998664321
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
......++..|+|||.+.+..++.++||||+|+++|+|++|+.||..... ............ .
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~--------~~~~~~~~~~~~-~------- 219 (256)
T cd08220 157 -KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL--------PALVLKIMSGTF-A------- 219 (256)
T ss_pred -cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch--------HHHHHHHHhcCC-C-------
Confidence 22234678899999999988889999999999999999999999864321 122222211111 1
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+...+..+.+++.+||+.+|++|||+.|+++
T Consensus 220 --~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 220 --PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred --CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111223445889999999999999999999986
No 256
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=5.9e-33 Score=306.35 Aligned_cols=259 Identities=24% Similarity=0.447 Sum_probs=204.1
Q ss_pred chhhHHHhhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEEEec-
Q 001562 766 TYDNVVRATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVG- 842 (1052)
Q Consensus 766 ~~~~~~~~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~- 842 (1052)
++.+...+.+.|++.+.||+|+||.||+|.. .+++.||+|++.... ....++..|+.+++++ +|+|++++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 4555556778999999999999999999966 458899999886543 2346678899999998 69999999999853
Q ss_pred -----CCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEE
Q 001562 843 -----EAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYL 917 (1052)
Q Consensus 843 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl 917 (1052)
....+++|||+++|+|.+++.......+++..+..++.|+++|++|||+. +|+||||+|+||++++++.++|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEE
Confidence 45789999999999999999876666788999999999999999999999 9999999999999999999999
Q ss_pred EeccccccccccccccccCcccccccccccccc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHH
Q 001562 918 SDFGLARLLEVSETHATTDVAGTFGYVAPEYAT-----TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVS 992 (1052)
Q Consensus 918 ~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~ 992 (1052)
+|||++....... .......+++.|+|||.+. +..++.++||||+||++|||++|+.||....+. ..
T Consensus 163 ~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~-------~~ 234 (282)
T cd06636 163 VDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM-------RA 234 (282)
T ss_pred eeCcchhhhhccc-cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH-------hh
Confidence 9999987553221 1223356888999999875 345778999999999999999999999643211 00
Q ss_pred HHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 993 WAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.... ...... . ......+..+.+++.+||+.||.+||++.|+++
T Consensus 235 -~~~~-~~~~~~-----~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 235 -LFLI-PRNPPP-----K---LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred -hhhH-hhCCCC-----C---CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0001 111000 0 011223456999999999999999999999875
No 257
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=9.4e-33 Score=305.44 Aligned_cols=262 Identities=25% Similarity=0.390 Sum_probs=203.4
Q ss_pred cchhhHHHhhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEEEe-
Q 001562 765 LTYDNVVRATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYV- 841 (1052)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~- 841 (1052)
+.++.+..+.++|++.+.||+|+||.||+|... +++.+|+|++..... ...++.+|+.+++++ +|||++++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 345566678889999999999999999999654 578999998764332 235678899999999 6999999999874
Q ss_pred ----cCCeEEEEEeecCCCCHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcE
Q 001562 842 ----GEAEMFLVYNFLSGGNLETFIHKK--SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNA 915 (1052)
Q Consensus 842 ----~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~ 915 (1052)
.+...++||||+++++|.+++... ....+++..+..++.|+++|+.|||+. +|+||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCE
Confidence 345689999999999999988642 235688999999999999999999999 99999999999999999999
Q ss_pred EEEeccccccccccccccccCccccccccccccccC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcch
Q 001562 916 YLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATT-----CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNI 990 (1052)
Q Consensus 916 kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~ 990 (1052)
+|+|||++....... .......|++.|+|||++.. ..++.++||||+||++|||++|+.||......
T Consensus 164 kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~------- 235 (286)
T cd06638 164 KLVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM------- 235 (286)
T ss_pred EEccCCceeecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh-------
Confidence 999999998654322 22233468899999998853 44788999999999999999999998743211
Q ss_pred HHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 991 VSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
....+ ..........+ +......+.+++.+||+.||++||++.|+++.
T Consensus 236 ~~~~~--~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 236 RALFK--IPRNPPPTLHQ-------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred HHHhh--ccccCCCcccC-------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 11110 01111111111 11123458899999999999999999999874
No 258
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.6e-32 Score=301.51 Aligned_cols=248 Identities=27% Similarity=0.419 Sum_probs=203.3
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
++|++.+.||.|+||.||+|... +++.||+|.+.... ......+.+|++++++++|+|++++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36888999999999999999654 58999999987553 33456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++... .+++..+..++.|++.|+.|||++ +++||||+|+||++++++.++|+|||++....... .
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~ 153 (274)
T cd06609 81 CGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-S 153 (274)
T ss_pred eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc-c
Confidence 9999999999764 689999999999999999999999 99999999999999999999999999998765332 2
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
......+++.|+|||.+.+..++.++||||||+++|||+||+.||....+ ...... ....... .+.
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~--------~~~~~~-~~~~~~~-----~~~ 219 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP--------MRVLFL-IPKNNPP-----SLE 219 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch--------HHHHHH-hhhcCCC-----CCc
Confidence 22334678899999999998899999999999999999999999964321 111111 1111111 111
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.. ..+..+.+++.+|++.+|++||+++++++
T Consensus 220 ~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 220 GN---KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred cc---ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 11 13445889999999999999999999975
No 259
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.4e-32 Score=308.96 Aligned_cols=194 Identities=24% Similarity=0.428 Sum_probs=160.3
Q ss_pred ceeeecCceEEEEEEec---CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEec--CCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELV---PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVG--EAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~ 855 (1052)
.+||+|+||+||+|... ++..||+|.+..... ...+.+|++++++++||||+++++++.. +...++|+||++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 57999999999999764 357899998865432 2467889999999999999999999853 567899999985
Q ss_pred CCHHHHHhhcc-------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE----CCCCcEEEEeccccc
Q 001562 856 GNLETFIHKKS-------GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILL----DEELNAYLSDFGLAR 924 (1052)
Q Consensus 856 gsL~~~l~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill----~~~~~~kl~Dfgla~ 924 (1052)
++|.+++.... ...+++..+.+++.|++.|+.|||+. +|+||||||+||++ ++++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 58888875321 23578899999999999999999999 99999999999999 566789999999998
Q ss_pred ccccccc--ccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 001562 925 LLEVSET--HATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPS 980 (1052)
Q Consensus 925 ~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~ 980 (1052)
....... .......+++.|+|||.+.+. .++.++||||+||++|||+||++||...
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 7653322 122345688999999998764 5789999999999999999999999744
No 260
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.9e-32 Score=298.04 Aligned_cols=247 Identities=27% Similarity=0.419 Sum_probs=201.4
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc-----hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR-----FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
+|+..+.||+|+||.||+|... +++.|++|.+.... .+..+.+.+|++++++++|+|++++++++.++...+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4778899999999999999765 78999999886543 22456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
+||+++++|.+++... ..+++..+..++.|+++|++|||+. +|+|+||+|+||+++.++.+||+|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 9999999999999765 3588999999999999999999999 9999999999999999999999999998865432
Q ss_pred ccccccCccccccccccccccCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 930 ETHATTDVAGTFGYVAPEYATTCR-VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 930 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
. ......++..|+|||.+.... ++.++|+||+|+++|+|++|+.||..... ............ .
T Consensus 156 ~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~--------~~~~~~~~~~~~-~---- 220 (258)
T cd06632 156 S--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG--------VAAVFKIGRSKE-L---- 220 (258)
T ss_pred c--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH--------HHHHHHHHhccc-C----
Confidence 2 223456788999999988766 88999999999999999999999874321 111111111111 1
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+ ..+......+.+++.+||+.+|++||++.++++
T Consensus 221 ~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 P----PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred C----CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 1 112233455889999999999999999999975
No 261
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.9e-33 Score=314.29 Aligned_cols=193 Identities=26% Similarity=0.359 Sum_probs=165.5
Q ss_pred hhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
...+|++.+.||+|+||.||+|... +++.||+|+.... ....|+.++++++||||+++++++.+....++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3457999999999999999999765 4678999975322 23568999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
++ .++|.+++.... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||.++.....
T Consensus 138 ~~-~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 210 (357)
T PHA03209 138 HY-SSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-- 210 (357)
T ss_pred cc-CCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccC--
Confidence 99 579999987643 5789999999999999999999999 9999999999999999999999999999743221
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLD 978 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~ 978 (1052)
.......|++.|+|||++.+..++.++|||||||++|||+++..|+.
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 211 PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 12233568999999999999999999999999999999999665553
No 262
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.1e-32 Score=302.02 Aligned_cols=249 Identities=24% Similarity=0.420 Sum_probs=197.8
Q ss_pred ceeeecCceEEEEEEecC-------CeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 781 NLIGTGGFGSTYKAELVP-------GYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+.||+|+||.||+|...+ +..+|+|.+.... .....++.+|+++++.++||||+++++++......++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999996542 2579999876543 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcc-----CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC-----cEEEEeccc
Q 001562 853 LSGGNLETFIHKKS-----GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL-----NAYLSDFGL 922 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~-----~~kl~Dfgl 922 (1052)
+++++|.++++... ...+++.++..++.|++.|++|||+. +++|+||+|+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997642 23478899999999999999999998 999999999999999887 899999999
Q ss_pred cccccccccc-cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHh
Q 001562 923 ARLLEVSETH-ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKE 1000 (1052)
Q Consensus 923 a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
+......... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+...... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--------~~~~~~~~-~ 228 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--------QEVLQHVT-A 228 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--------HHHHHHHh-c
Confidence 9765432221 1222345678999999999999999999999999999998 9988863211 11122211 1
Q ss_pred CCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 1001 GRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 1001 ~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
+... ..+...+..+.+++.+||+.+|++||+++++++.|++
T Consensus 229 ~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 229 GGRL---------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred CCcc---------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1100 1122345568999999999999999999999999864
No 263
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.1e-32 Score=302.70 Aligned_cols=259 Identities=25% Similarity=0.343 Sum_probs=202.0
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+|+.++++++|||++++++++..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4888999999999999999764 689999999876542 3346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+ +++|.+++.... ..+++.++..++.|+++|++|||+. +|+|+||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR 155 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC
Confidence 9 999999997654 5689999999999999999999999 9999999999999999999999999999876543322
Q ss_pred cccCccccccccccccccCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch-
Q 001562 933 ATTDVAGTFGYVAPEYATTCR-VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE- 1010 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~-~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1010 (1052)
......++..|+|||.+.+.. ++.++||||+|+++|||++|.+||..... ...+.+.....+.......+.
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-------IEQLAIVFRTLGTPNEETWPGL 228 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-------HHHHHHHHHHcCCCChHHHhhc
Confidence 233456888999999987544 58899999999999999999877753221 111111111111000000000
Q ss_pred -----------------hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1011 -----------------LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1011 -----------------l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+.....+....+.+++.+|++.+|++||+++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 229 TSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred cCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000011223467899999999999999999999986
No 264
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=8.8e-33 Score=313.82 Aligned_cols=256 Identities=25% Similarity=0.349 Sum_probs=194.8
Q ss_pred HhhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecC-----
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE----- 843 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 843 (1052)
...++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 4457899999999999999999965 4678999999865322 2345677899999999999999999987533
Q ss_pred -CeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccc
Q 001562 844 -AEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGL 922 (1052)
Q Consensus 844 -~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgl 922 (1052)
...|+++|++ +++|.++++. ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCcc
Confidence 3578999988 8899988864 3589999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH-Hh
Q 001562 923 ARLLEVSETHATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLI-KE 1000 (1052)
Q Consensus 923 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~ 1000 (1052)
++..... .....+++.|+|||++.+ ..++.++||||+||++|||++|+.||...... +...... ..
T Consensus 165 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~ 232 (343)
T cd07878 165 ARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI--------DQLKRIMEVV 232 (343)
T ss_pred ceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHHHh
Confidence 9865421 233468899999999877 56888999999999999999999999642111 1111110 00
Q ss_pred CCccccccchhh-----------cCCC--------HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1001 GRSSELFLPELW-----------EAGP--------QENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1001 ~~~~~~~~~~l~-----------~~~~--------~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+.....+...+. ...+ ......+.+++.+|++.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 233 GTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred CCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 100000000000 0000 011234789999999999999999999985
No 265
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.6e-32 Score=303.58 Aligned_cols=252 Identities=23% Similarity=0.409 Sum_probs=200.4
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccC-chhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIG-RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
++|++.+.||+|+||.||+|... +++.||+|.+... .......+.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36889999999999999999765 6899999988654 233456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 853 LSGGNLETFIHKKS-GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
+++++|.++++... ...+++..+..++.|+++|+.|||+.+ +|+||||||+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence 99999999987642 236899999999999999999999743 8999999999999999999999999998755322
Q ss_pred ccccCccccccccccccccCCC------CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 932 HATTDVAGTFGYVAPEYATTCR------VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~------~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
......+++.|+|||.+.+.. ++.++||||+||++|||++|+.||...... ........ ...+...
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~~~~~-~~~~~~~- 228 (286)
T cd06622 157 -LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-----NIFAQLSA-IVDGDPP- 228 (286)
T ss_pred -ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-----hHHHHHHH-HhhcCCC-
Confidence 122345778999999986543 478999999999999999999999642111 11111111 1111111
Q ss_pred cccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1006 LFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1006 ~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+......+.+++.+|++.+|++||+++++++
T Consensus 229 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 229 --------TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred --------CCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 122334556889999999999999999999986
No 266
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=5.6e-33 Score=305.59 Aligned_cols=246 Identities=26% Similarity=0.402 Sum_probs=200.3
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++..+...++|+||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 467778899999999999965 457899999886443 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++++|.+++.. ..+++..+..++.|+++|+.|||++ +++|+||+|+||++++++.++++|||++....... ..
T Consensus 85 ~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~ 157 (277)
T cd06642 85 GGGSALDLLKP---GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IK 157 (277)
T ss_pred CCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc-hh
Confidence 99999999864 3588999999999999999999998 99999999999999999999999999997654322 12
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhc
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWE 1013 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1013 (1052)
.....++..|+|||.+.+..++.++||||||+++|||++|+.|+....+. .... ....+. .+.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--------~~~~-~~~~~~-----~~~--- 220 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM--------RVLF-LIPKNS-----PPT--- 220 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh--------hHHh-hhhcCC-----CCC---
Confidence 22345788999999999988999999999999999999999998633211 1111 111111 111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1014 AGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1014 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+...+..+.+++.+||+.+|++||++.++++
T Consensus 221 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 221 -LEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred -CCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 12234456889999999999999999999987
No 267
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.4e-32 Score=306.33 Aligned_cols=255 Identities=25% Similarity=0.424 Sum_probs=200.7
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCe----EEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGY----LVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 847 (1052)
.++|+..+.||+|+||.||+|.+. +|. .||+|.+..... ....++.+|+.++++++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 356888899999999999999653 343 578888765432 2244688999999999999999999998754 567
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+++||+++|+|.+++.... ..++++.+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccccc
Confidence 9999999999999997653 4688999999999999999999999 99999999999999999999999999998664
Q ss_pred ccccc-cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 928 VSETH-ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 928 ~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
..... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+.. .....+....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--------~~~~~-~~~~~~~~~~ 231 (303)
T cd05110 161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--------TREIP-DLLEKGERLP 231 (303)
T ss_pred CcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHH-HHHHCCCCCC
Confidence 32221 1222345678999999999899999999999999999998 888886321 11111 2222221110
Q ss_pred cccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 1006 LFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 1006 ~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.+..++..+.+++.+||..+|++||+++++++.++++
T Consensus 232 ---------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 232 ---------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred ---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1112334688999999999999999999999998865
No 268
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.2e-32 Score=302.50 Aligned_cols=261 Identities=25% Similarity=0.350 Sum_probs=199.0
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46889999999999999999765 589999998864432 223567899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|++++.+..+.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 99998888876543 4689999999999999999999998 999999999999999999999999999987643321
Q ss_pred ccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH-----------
Q 001562 932 HATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIK----------- 999 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 999 (1052)
......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||...... ...........
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 156 -DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV-----DQLYLIRKTLGDLIPRHQQIFS 229 (286)
T ss_pred -cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCChHHhhhcc
Confidence 2223457789999999876 45788999999999999999999999743221 00100000000
Q ss_pred hCC-ccccccchhhcCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1000 EGR-SSELFLPELWEAGP-----QENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1000 ~~~-~~~~~~~~l~~~~~-----~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
... ......+......+ ...+..+.+++.+||+.+|++||++.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 230 TNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000 00000000000000 122456889999999999999999999875
No 269
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.3e-32 Score=300.12 Aligned_cols=255 Identities=25% Similarity=0.401 Sum_probs=199.6
Q ss_pred CcccceeeecCceEEEEEEec----CCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCC------
Q 001562 777 FSIRNLIGTGGFGSTYKAELV----PGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA------ 844 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 844 (1052)
|++.++||+|+||.||+|... ++..||+|++.... ....+++.+|++++++++|||++++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567889999999999999653 36889999886542 334567889999999999999999999886432
Q ss_pred eEEEEEeecCCCCHHHHHhhcc----CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEec
Q 001562 845 EMFLVYNFLSGGNLETFIHKKS----GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDF 920 (1052)
Q Consensus 845 ~~~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Df 920 (1052)
..++++||+++|+|.+++.... ...+++..+.+++.|++.|++|||+. +|+||||||+||++++++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2478899999999999875432 12578899999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccc-cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHHHHHHH
Q 001562 921 GLARLLEVSETH-ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSWAKLLI 998 (1052)
Q Consensus 921 gla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
|.++........ ......+++.|++||.+....++.++||||||+++|||++ |++||..... .+......
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~ 229 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--------SEIYNYLI 229 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--------HHHHHHHH
Confidence 999866433221 1222345678999999998889999999999999999999 7888763211 12222222
Q ss_pred HhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 001562 999 KEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQLK 1052 (1052)
Q Consensus 999 ~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ik 1052 (1052)
...... .+......+.+++.+|++.+|++||++.|+++.|+++.
T Consensus 230 ~~~~~~----------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~~ 273 (273)
T cd05074 230 KGNRLK----------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELIW 273 (273)
T ss_pred cCCcCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 111111 11223456999999999999999999999999998863
No 270
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=5.4e-33 Score=302.23 Aligned_cols=240 Identities=24% Similarity=0.321 Sum_probs=189.9
Q ss_pred ceeeecCceEEEEEEecC--------CeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 781 NLIGTGGFGSTYKAELVP--------GYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.+++.++|||++++++++..+...++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 468999999999996532 234888887655555567788999999999999999999999998999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCc--------EEEEeccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELN--------AYLSDFGLAR 924 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~--------~kl~Dfgla~ 924 (1052)
+++|+|.++++... ..+++..+.+++.|++.|++|||++ +|+||||||+||+++.++. ++++|||.+.
T Consensus 81 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 81 VKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999999998654 4689999999999999999999999 9999999999999987765 6999999987
Q ss_pred cccccccccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCC-CCCCCCcccCCCCcchHHHHHHHHHhCC
Q 001562 925 LLEVSETHATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGK-RSLDPSFSEYGNGFNIVSWAKLLIKEGR 1002 (1052)
Q Consensus 925 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
.... .....++..|+|||++.+. .++.++||||||+++|||++|. .|+... .. .... ..... .
T Consensus 157 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~-~~-------~~~~-~~~~~-~ 221 (258)
T cd05078 157 TVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSAL-DS-------QKKL-QFYED-R 221 (258)
T ss_pred ccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhc-cH-------HHHH-HHHHc-c
Confidence 5432 1224577889999999874 5788999999999999999996 444321 11 1111 11111 1
Q ss_pred ccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 1003 SSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 1003 ~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
. ..+......+.+++.+||+.||++|||++++++.|+
T Consensus 222 ~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 H----------QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred c----------cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 112222345899999999999999999999999874
No 271
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=6.8e-33 Score=306.19 Aligned_cols=258 Identities=22% Similarity=0.304 Sum_probs=197.4
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh--hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+|++.+.||+|+||.||+|... +|+.||+|++...... ....+.+|++++++++|||++++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999764 6889999998654322 235677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
++ ++|.+++.... ..+++..+..++.||++|+.|||++ +|+||||||+||+++.++.++|+|||+++...... .
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~ 154 (284)
T cd07839 81 CD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-R 154 (284)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC-C
Confidence 95 68888887643 4689999999999999999999999 99999999999999999999999999998654322 1
Q ss_pred cccCccccccccccccccCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhC-Cc-------
Q 001562 933 ATTDVAGTFGYVAPEYATTCR-VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEG-RS------- 1003 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~-~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~------- 1003 (1052)
......++..|+|||.+.+.. ++.++||||+||++|||+||+.|+.+.... .+..+...... ..
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-------DDQLKRIFRLLGTPTEESWPG 227 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH-------HHHHHHHHHHhCCCChHHhHH
Confidence 223345788999999987644 688999999999999999999987543221 11111111100 00
Q ss_pred -----cccccchh-----hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1004 -----SELFLPEL-----WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1004 -----~~~~~~~l-----~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.....+.. +....+.....+.+++.+|++.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 228 VSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00000000 01111223456889999999999999999999875
No 272
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2e-32 Score=297.96 Aligned_cols=238 Identities=25% Similarity=0.368 Sum_probs=189.5
Q ss_pred ceeeecCceEEEEEEecCC-----------eEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEE
Q 001562 781 NLIGTGGFGSTYKAELVPG-----------YLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~~-----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
+.||+|+||.||+|..... ..|++|.+...... ...+.+|+.++++++|||++++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 4689999999999976543 25788877654433 5788999999999999999999999988 778999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC-------cEEEEeccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL-------NAYLSDFGL 922 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~-------~~kl~Dfgl 922 (1052)
|||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++ .++|+|||+
T Consensus 79 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 79 EEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 99999999999998754 3688999999999999999999999 999999999999999887 799999999
Q ss_pred cccccccccccccCccccccccccccccCC--CCCchhHHHHHHHHHHHHHhC-CCCCCCCcccCCCCcchHHHHHHHHH
Q 001562 923 ARLLEVSETHATTDVAGTFGYVAPEYATTC--RVSDKADVYSFGVVLLELISG-KRSLDPSFSEYGNGFNIVSWAKLLIK 999 (1052)
Q Consensus 923 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~sDv~slG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
+..... .....++..|+|||++.+. .++.++||||||+++|||++| ..||..... .++.... .
T Consensus 155 a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~--------~~~~~~~-~ 220 (259)
T cd05037 155 PITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS--------SEKERFY-Q 220 (259)
T ss_pred cccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc--------hhHHHHH-h
Confidence 986542 2223466789999999876 788999999999999999994 666653211 1111111 1
Q ss_pred hCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 1000 EGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 1000 ~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
..... +......+.+++.+||..+|++||++.|+++.|+
T Consensus 221 ~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 DQHRL-----------PMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred cCCCC-----------CCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11100 0111156889999999999999999999998874
No 273
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.3e-32 Score=297.54 Aligned_cols=248 Identities=25% Similarity=0.384 Sum_probs=195.4
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc-----hhhHHHHHHHHHHhccCCcCceeeEEEEEec--CCeEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR-----FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVG--EAEMF 847 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 847 (1052)
+|+..+.||+|+||.||+|.. .++..||+|++.... .+....+.+|++++++++||||+++++++.+ ....+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 688899999999999999965 458899999886432 2234568889999999999999999999875 35788
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+++||+++++|.+++... ..+++.....++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||++....
T Consensus 83 l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 999999999999999765 3588999999999999999999998 99999999999999999999999999987653
Q ss_pred cccc--ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 928 VSET--HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 928 ~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
.... .......++..|+|||.+.+..++.++||||+||++|||++|+.||..... ............
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~--------~~~~~~~~~~~~--- 226 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA--------MAAIFKIATQPT--- 226 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch--------HHHHHHHhcCCC---
Confidence 2111 111234578899999999998899999999999999999999999973211 111111111111
Q ss_pred cccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1006 LFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1006 ~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+. .+......+.+++ +||..+|++||+++|+++
T Consensus 227 --~~~----~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 --NPQ----LPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred --CCC----CchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 111 1223334467777 688899999999999975
No 274
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3e-32 Score=298.05 Aligned_cols=255 Identities=24% Similarity=0.411 Sum_probs=204.8
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
++|++.+.||.|+||+||+|... ++..+|+|++.... ......+.+|++.++.++|+|++++++.+..+...++|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 36899999999999999999754 57899999986543 23457789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccC-CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 853 LSGGNLETFIHKKSG-KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
+++++|.++++.... ..+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999987543 5689999999999999999999999 999999999999999999999999999986653322
Q ss_pred c---cccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc
Q 001562 932 H---ATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF 1007 (1052)
Q Consensus 932 ~---~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
. ......++..|+|||.+... .++.++|+||||+++|||++|+.||...... ............
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~---- 225 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM--------KVLMLTLQNDPP---- 225 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh--------hhHHHHhcCCCC----
Confidence 2 22334688899999998876 7889999999999999999999999743221 111111111110
Q ss_pred cchhhcCC-CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1008 LPELWEAG-PQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1008 ~~~l~~~~-~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+.... ....+..+.+++.+|++.||++||++.|+++
T Consensus 226 --~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 226 --SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred --CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 111000 1233456899999999999999999999985
No 275
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3.5e-32 Score=297.57 Aligned_cols=251 Identities=20% Similarity=0.329 Sum_probs=189.9
Q ss_pred eeeecCceEEEEEEecCC---eEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCC
Q 001562 782 LIGTGGFGSTYKAELVPG---YLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGN 857 (1052)
Q Consensus 782 ~Lg~G~~g~V~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 857 (1052)
.||+|+||+||+|+..++ ..+++|.+.... ....+.+.+|+..++.++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999965433 346677665433 2345788999999999999999999999999999999999999999
Q ss_pred HHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc-cccc
Q 001562 858 LETFIHKKS--GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE-THAT 934 (1052)
Q Consensus 858 L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~-~~~~ 934 (1052)
|.++++... ....++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++....... ....
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 999997643 23466777889999999999999999 99999999999999999999999999986432211 1122
Q ss_pred cCccccccccccccccC-------CCCCchhHHHHHHHHHHHHHhC-CCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 935 TDVAGTFGYVAPEYATT-------CRVSDKADVYSFGVVLLELISG-KRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 935 ~~~~g~~~y~aPE~~~~-------~~~~~~sDv~slG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
....++..|+|||++.. ..++.++||||||+++|||+++ ..||.... ..+......... ....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~--------~~~~~~~~~~~~-~~~~ 229 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS--------DREVLNHVIKDQ-QVKL 229 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHhhc-cccc
Confidence 34567889999998753 2356789999999999999975 55664221 122333333222 2222
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
.++.+... ....+.+++..|| .+|++||+++++++.|.
T Consensus 230 ~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 230 FKPQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 33333222 2345788999999 67999999999998874
No 276
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-32 Score=302.94 Aligned_cols=257 Identities=26% Similarity=0.415 Sum_probs=205.2
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
++|++.+.||+|+||+||+|... +++.||+|++.... ....+++.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46888999999999999999654 58889999876543 23356789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++... ..+++..+..++.+++.|+.|||+.. +|+||||+|+||++++++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~--- 157 (284)
T cd06620 85 MDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS--- 157 (284)
T ss_pred CCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh---
Confidence 9999999998764 46899999999999999999999742 8999999999999999999999999998754321
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCC---CCcchHHHHHHHHHhCCccccccc
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYG---NGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......++..|+|||++.+..++.++|||||||++||+++|+.||........ ......++.+....... +
T Consensus 158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 231 (284)
T cd06620 158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP------P 231 (284)
T ss_pred ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC------C
Confidence 12234688999999999888899999999999999999999999985433211 11112222222222111 1
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
.+. ....+..+.+++.+|++.||++||++.|+++.
T Consensus 232 ~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 232 RLP---SSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred CCC---chhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 110 11234568999999999999999999999875
No 277
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.3e-32 Score=305.61 Aligned_cols=252 Identities=26% Similarity=0.381 Sum_probs=203.2
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh---hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ---GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|+++++.++|+||+++++++.+....++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999665 4899999998765332 4567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+.+++|.+++....+..+++..+..++.|+++|++|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 999999999999876667799999999999999999999999 99999999999999999999999999987653221
Q ss_pred cc----------------------------cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc
Q 001562 931 TH----------------------------ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFS 982 (1052)
Q Consensus 931 ~~----------------------------~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~ 982 (1052)
.. ......|+..|+|||++.+..++.++||||||+++|+|++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 10 11123578899999999998899999999999999999999999974321
Q ss_pred cCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCC----HHHHHH
Q 001562 983 EYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPS----VKQVLI 1046 (1052)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs----~~eil~ 1046 (1052)
. +...... ..... . ......+..+.+++.+|++.||++||+ ++|+++
T Consensus 238 ~--------~~~~~~~-~~~~~------~--~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 238 D--------ETFSNIL-KKEVT------F--PGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred H--------HHHHHHh-cCCcc------C--CCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 1 1111111 11110 0 001114556999999999999999999 666654
No 278
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.7e-32 Score=299.75 Aligned_cols=253 Identities=26% Similarity=0.419 Sum_probs=205.0
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+++.+|++++++++||||+++++++..+...++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35788899999999999999765 58899999887653 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHY-SCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
+++++|.+++.... ..+++..+..++.|+++|++|||+ . +++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 81 MDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred cCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence 99999999998764 578899999999999999999999 7 999999999999999999999999999876532221
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
. ...++..|+|||.+.+..++.++||||+|+++|+|++|+.||...... .....+..+..... ... .+
T Consensus 157 ~---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~-~~~-----~~ 224 (265)
T cd06605 157 K---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP---PDGIFELLQYIVNE-PPP-----RL 224 (265)
T ss_pred h---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc---cccHHHHHHHHhcC-CCC-----CC
Confidence 1 156788999999999999999999999999999999999999754321 11222222222221 111 11
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
... .....+.++|.+||..+|++||++.|+++
T Consensus 225 ~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 225 PSG---KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred Chh---hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 111 13455899999999999999999999875
No 279
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4e-32 Score=301.11 Aligned_cols=260 Identities=27% Similarity=0.405 Sum_probs=202.7
Q ss_pred chhhHHHhhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEEEecC
Q 001562 766 TYDNVVRATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGE 843 (1052)
Q Consensus 766 ~~~~~~~~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 843 (1052)
..+.+..+.++|++.+.||+|+||.||+|.. .+++.+|+|++..... ...++.+|+.+++++ +|||++++++++...
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 3455566788999999999999999999966 4688999998865432 235677899999998 899999999998753
Q ss_pred -----CeEEEEEeecCCCCHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEE
Q 001562 844 -----AEMFLVYNFLSGGNLETFIHKK--SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAY 916 (1052)
Q Consensus 844 -----~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~k 916 (1052)
...++|+||+++++|.++++.. ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.++
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEE
Confidence 3589999999999999998642 235689999999999999999999999 999999999999999999999
Q ss_pred EEeccccccccccccccccCccccccccccccccCCC-----CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchH
Q 001562 917 LSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCR-----VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIV 991 (1052)
Q Consensus 917 l~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-----~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~ 991 (1052)
|+|||.+........ ......++..|+|||.+.... ++.++||||+||++|||++|+.||....+.
T Consensus 169 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-------- 239 (291)
T cd06639 169 LVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-------- 239 (291)
T ss_pred Eeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH--------
Confidence 999999886543221 222346788999999886432 578999999999999999999998743211
Q ss_pred HHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 992 SWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+..... ......... .+......+.+++.+||+.+|++||++.|+++
T Consensus 240 ~~~~~~-~~~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 240 KTLFKI-PRNPPPTLL-------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHHHH-hcCCCCCCC-------cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111111 111111111 12223446899999999999999999999986
No 280
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=337.39 Aligned_cols=464 Identities=26% Similarity=0.300 Sum_probs=338.8
Q ss_pred CCCCCCeeEecCCCceecCCCCccCCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCccccCCCCCcEE
Q 001562 121 KLTELRTLSVPHNSFSGEIPAGVGELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGNGELSVI 200 (1052)
Q Consensus 121 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 200 (1052)
+--+|+.|++++|++. ..|..+..+.+|+.|+++.|.+. ..|.+.+++.+|++|+|..|.+. ..|.++..+.+|+.|
T Consensus 43 ~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~L 119 (1081)
T KOG0618|consen 43 KRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYL 119 (1081)
T ss_pred heeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhccccc
Confidence 3344888888888877 77777888888888888888887 67788888888888888888877 788888888888888
Q ss_pred EccCCcccCccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEEEccCCCC
Q 001562 201 DMSSNRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVLDVSRNSL 280 (1052)
Q Consensus 201 ~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 280 (1052)
+++.|++.. +| ..+..++.++.+..++|..... ++... ++.+++..|.+.+.++..+..++. .|+|.+|.+
T Consensus 120 dlS~N~f~~-~P-l~i~~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~ 190 (1081)
T KOG0618|consen 120 DLSFNHFGP-IP-LVIEVLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEM 190 (1081)
T ss_pred ccchhccCC-Cc-hhHHhhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchh
Confidence 888888764 32 3445567777778888822222 22222 788888888888888888877776 788888888
Q ss_pred CCCCCcccccCCCCCeeecccCcccccCCCCCCccccccCCCchhhhcccCCcEeecCCCCCcccCCccccCCCCccEEe
Q 001562 281 TDRIPVELADCSKLSVLVLTNIDASLDLDNSRGEFSAFDGGVPYELLLSRSLEVLWAPRANLGGRLPDNWSESCSLKVLN 360 (1052)
Q Consensus 281 ~~~~p~~l~~l~~L~~L~L~~n~~~~~l~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ 360 (1052)
. -..+.++.+|+.+....|.++.. + ....+|+.|+.+.|.+....+. .-..+|++++
T Consensus 191 ~---~~dls~~~~l~~l~c~rn~ls~l-----------~-------~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~d 247 (1081)
T KOG0618|consen 191 E---VLDLSNLANLEVLHCERNQLSEL-----------E-------ISGPSLTALYADHNPLTTLDVH--PVPLNLQYLD 247 (1081)
T ss_pred h---hhhhhhccchhhhhhhhcccceE-----------E-------ecCcchheeeeccCcceeeccc--cccccceeee
Confidence 6 24567777888887776665411 1 1236888999999998844432 2335799999
Q ss_pred CCCCcccccCCccccccCCCCEEeCCCCcCccCCCCCCCCCccceEecccCccccCCCCCccccccccCCcccccccccc
Q 001562 361 LGQNSLKGAVPKSLGMCRNLTYLDLSLNNLEGYLPMQLPVPCMVYFNVSQNNITGVLPRFENVSCDNHFGFQDLQYANVP 440 (1052)
Q Consensus 361 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~l~~~~~~ 440 (1052)
+++|+++ .+|++++.+.+|+.++..+|+|+..+-..+...+|+.|.+.+|.+.-++|..+..
T Consensus 248 is~n~l~-~lp~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~----------------- 309 (1081)
T KOG0618|consen 248 ISHNNLS-NLPEWIGACANLEALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGL----------------- 309 (1081)
T ss_pred cchhhhh-cchHHHHhcccceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCccccc-----------------
Confidence 9999999 5779999999999999999999765555667888999999999998877765433
Q ss_pred ccCcccccceeeeeeccCCccccccCcccccccccccccchhHHhhccCCcccCCCCCccccccCCCcceEEecCccccc
Q 001562 441 VMGSISDENFVIIHDFSGNKFLGSLPLFAIGDGFLAAKYKPHYRLLLNNNMFNGSVPGERISKCNDLQSFSVNLSANLLS 520 (1052)
Q Consensus 441 ~~~~~~~~~~l~~l~ls~n~~~g~~p~~~~~~~~~~~~~~~~~~l~l~~n~~~~~~p~~~~~~~~~l~~~~l~l~~n~l~ 520 (1052)
+.++.||+..|++. .+| +..+..... ..-.++.+.|.+.
T Consensus 310 --------~sL~tLdL~~N~L~-~lp-------------------------------~~~l~v~~~-~l~~ln~s~n~l~ 348 (1081)
T KOG0618|consen 310 --------KSLRTLDLQSNNLP-SLP-------------------------------DNFLAVLNA-SLNTLNVSSNKLS 348 (1081)
T ss_pred --------ceeeeeeehhcccc-ccc-------------------------------hHHHhhhhH-HHHHHhhhhcccc
Confidence 34556666666553 222 111111100 0012344555555
Q ss_pred ccchHHHHhcCCCceEEEccCcccccccccccCCCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCCccCCcCchhh
Q 001562 521 GMSYEAFLLDCVQLVEFEAANNQISGSIAAGVGKLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGNNLTGEIPSQF 600 (1052)
Q Consensus 521 ~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 600 (1052)
..+... ......|++|++.+|.++...-..+.++.+|+.|+|++|+|.......+.++..|++|+||+|+++ .+|..+
T Consensus 349 ~lp~~~-e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tv 426 (1081)
T KOG0618|consen 349 TLPSYE-ENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTV 426 (1081)
T ss_pred cccccc-chhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHH
Confidence 554211 124567999999999999888889999999999999999999666677889999999999999999 889999
Q ss_pred cCCcCCcEEEcCCCCCCCCCcchhcccccccceeccCCcCCCCCCcccccccccCeEecccCcCC----CCCCccccccc
Q 001562 601 GHLISLVVLDLSHNALTGSIPASLTKATKLESLFLAHNRLSGEIPVSFSTLVNLSALDLSFNNLS----GHIPHLQHLDC 676 (1052)
Q Consensus 601 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~----~~~p~~~~l~~ 676 (1052)
..++.|++|...+|+|. ..| .+..++.|+.+|++.|+|+...-..-..-++|++|||+||.-. ..+|.+.++..
T Consensus 427 a~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~ 504 (1081)
T KOG0618|consen 427 ANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQ 504 (1081)
T ss_pred HhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhh
Confidence 99999999999999998 788 7899999999999999998433222222379999999999842 34444444444
Q ss_pred ccccCC
Q 001562 677 IAFKGN 682 (1052)
Q Consensus 677 ~~~~~n 682 (1052)
.++.-|
T Consensus 505 ~~i~~~ 510 (1081)
T KOG0618|consen 505 MDITLN 510 (1081)
T ss_pred eecccC
Confidence 444433
No 281
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-34 Score=308.19 Aligned_cols=251 Identities=25% Similarity=0.406 Sum_probs=207.9
Q ss_pred CCCcccceeeecCceEEEEEEecC-CeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELVP-GYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
+.|+|..-||.|+||.||+|..++ +-..|.|++........++|.-|++++....||+||++++.|..++.+++..|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 457788889999999999996653 4456778888888888899999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
.||-++..+-.- +..+++.++..+++|++.||.|||++ .|||||+|+.|||++-+|.++++|||.+.... .....
T Consensus 112 ~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~-~t~qk 186 (1187)
T KOG0579|consen 112 GGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNK-STRQK 186 (1187)
T ss_pred CCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccch-hHHhh
Confidence 999998887654 37899999999999999999999999 99999999999999999999999999986433 23344
Q ss_pred ccCcccccccccccccc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 934 TTDVAGTFGYVAPEYAT-----TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~-----~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
...+.|||.|||||+.. ..+|..++||||||+.+.||..+.+|...-. ... +-..+........+-
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln--------pMR-VllKiaKSePPTLlq 257 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN--------PMR-VLLKIAKSEPPTLLQ 257 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc--------hHH-HHHHHhhcCCCcccC
Confidence 56688999999999864 5778999999999999999999998876321 111 122222333333333
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
|. .....+.+++++|+..+|..||+++++++
T Consensus 258 PS-------~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 258 PS-------HWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred cc-------hhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 33 34456899999999999999999999876
No 282
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-32 Score=330.10 Aligned_cols=262 Identities=25% Similarity=0.384 Sum_probs=212.9
Q ss_pred hHHHhhCCCcccceeeecCceEEEEEEec--------CCeEEEEEEeccCc-hhhHHHHHHHHHHhccC-CcCceeeEEE
Q 001562 769 NVVRATGNFSIRNLIGTGGFGSTYKAELV--------PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRI-RHKNLVTLIG 838 (1052)
Q Consensus 769 ~~~~~~~~~~~~~~Lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~ 838 (1052)
.++...++.++.+.+|+|+||.||+|... ....||||..+... ..+.+.+..|+++|+.+ +|+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 34455566677789999999999999533 14679999987543 34567899999999999 5999999999
Q ss_pred EEecCCeEEEEEeecCCCCHHHHHhhcc------------C--CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 001562 839 YYVGEAEMFLVYNFLSGGNLETFIHKKS------------G--KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKP 904 (1052)
Q Consensus 839 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------~--~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~ 904 (1052)
+|..++..++|.||++.|+|.+|++..+ . ..++..+...++.|||.||+||+++ +++|||+.+
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAa 446 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAA 446 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhh
Confidence 9999999999999999999999998765 1 2388999999999999999999999 999999999
Q ss_pred CCEEECCCCcEEEEeccccccccccccccccCcc--ccccccccccccCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCc
Q 001562 905 SNILLDEELNAYLSDFGLARLLEVSETHATTDVA--GTFGYVAPEYATTCRVSDKADVYSFGVVLLELIS-GKRSLDPSF 981 (1052)
Q Consensus 905 ~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~--g~~~y~aPE~~~~~~~~~~sDv~slG~il~ellt-g~~p~~~~~ 981 (1052)
+||+++++..+||+|||+|+...+.+.+....-. -+.+|||||.+....|+.++||||||+++||++| |..||.. .
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~-~ 525 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG-I 525 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC-C
Confidence 9999999999999999999976655554433222 4568999999999999999999999999999999 5566542 1
Q ss_pred ccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 982 SEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
. ...+..+ ..+.|...+ .|..+..++.++++.||+.+|++||++.|+++.++.
T Consensus 526 ~------~~~~l~~-~l~~G~r~~---------~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 526 P------PTEELLE-FLKEGNRME---------QPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred C------cHHHHHH-HHhcCCCCC---------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 1 0122222 444544432 244556678999999999999999999999999875
No 283
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=7e-32 Score=294.81 Aligned_cols=249 Identities=24% Similarity=0.352 Sum_probs=197.2
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc-----hhhHHHHHHHHHHhccCCcCceeeEEEEEecC--CeE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR-----FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE--AEM 846 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 846 (1052)
.+|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+. ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46889999999999999999654 58999999875322 12345788899999999999999999998763 467
Q ss_pred EEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccc
Q 001562 847 FLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLL 926 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~ 926 (1052)
++||||+++++|.+++... ..+++..+.+++.|++.|++|||++ +|+|+||+|+||+++.++.++|+|||++...
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 8999999999999999765 3578889999999999999999999 9999999999999999999999999999865
Q ss_pred ccccc--ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcc
Q 001562 927 EVSET--HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSS 1004 (1052)
Q Consensus 927 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
..... .......++..|+|||.+.+..++.++||||||+++|||++|+.||..... ... ........ .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-------~~~-~~~~~~~~--~ 226 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA-------MAA-IFKIATQP--T 226 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch-------HHH-HHHHhcCC--C
Confidence 32211 112234578899999999988899999999999999999999999863211 111 11111111 0
Q ss_pred ccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1005 ELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1005 ~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. ...+......+.+++.+|+. +|++||+++|+++
T Consensus 227 ---~----~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 227 ---N----PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred ---C----CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 1 11234445568889999985 9999999999985
No 284
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=6.2e-32 Score=295.10 Aligned_cols=251 Identities=31% Similarity=0.478 Sum_probs=202.3
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh--hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+|++.+.||+|+||.||+|... +++.||+|.+...... ..+.+..|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5888999999999999999654 6889999998765543 567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++... ..+++..+..++.|+++|++|||+. +|+|+||+|+||++++++.+||+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999999999764 3578999999999999999999999 9999999999999999999999999999876533222
Q ss_pred cc---cCccccccccccccccCCC---CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 933 AT---TDVAGTFGYVAPEYATTCR---VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 933 ~~---~~~~g~~~y~aPE~~~~~~---~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
.. ....++..|+|||.+.+.. ++.++||||||+++||+++|+.||...... ...... ...+. .
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-------~~~~~~-~~~~~-~-- 224 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-------FQIMFH-VGAGH-K-- 224 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-------HHHHHH-HhcCC-C--
Confidence 21 1345788999999998766 788999999999999999999999743211 111111 11111 1
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+.+.. .......+.+++.+|++.+|++||++.|++.
T Consensus 225 --~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 225 --PPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred --CCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11111 1122455789999999999999999999874
No 285
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.8e-32 Score=298.52 Aligned_cols=259 Identities=25% Similarity=0.341 Sum_probs=202.1
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecC--CeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE--AEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 850 (1052)
++|+..+.||.|++|.||+|... +++.+|+|.+..... ....++.+|++++++++||||+++++++.+. ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36888899999999999999764 588999998875433 3456789999999999999999999998653 4689999
Q ss_pred eecCCCCHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 851 NFLSGGNLETFIHKK--SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
||+++++|.+++... ....+++..+..++.|+++|++|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999987642 235688999999999999999999999 999999999999999999999999999875432
Q ss_pred cccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.. .....++..|+|||.+.+..++.++||||+|+++|||++|+.||.....+.... .+........ ... .+.
T Consensus 158 ~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~-~~~-~~~ 229 (287)
T cd06621 158 SL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGP---IELLSYIVNM-PNP-ELK 229 (287)
T ss_pred cc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCCh---HHHHHHHhcC-Cch-hhc
Confidence 21 123356788999999999899999999999999999999999998553321122 2222222111 111 111
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
... ......+..+.+++.+||+.+|++|||+.|+++
T Consensus 230 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 230 DEP--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred cCC--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 010 001123456899999999999999999999986
No 286
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.9e-32 Score=303.08 Aligned_cols=259 Identities=27% Similarity=0.389 Sum_probs=199.3
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh--hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
++|++.+.||+|+||.||+|... +++.||+|++...... ..+.+.+|+++++.++||||+++++++.++...++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36889999999999999999775 5889999987643322 34568889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|++++++.++.... ..+++.++..++.|+++|++|||+. +|+||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 99999988876543 3589999999999999999999999 99999999999999999999999999998654332
Q ss_pred ccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccc-----
Q 001562 932 HATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE----- 1005 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 1005 (1052)
.......++..|+|||++.+ ..++.++||||||+++|||++|++||..... ...+.+.....+....
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD-------IDQLYHIIKCLGNLIPRHQEI 227 (286)
T ss_pred cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch-------HHHHHHHHHHhCCCchhhHHH
Confidence 22233457889999999875 4467899999999999999999988863321 1111111110000000
Q ss_pred ---------cccchhhc-----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1006 ---------LFLPELWE-----AGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1006 ---------~~~~~l~~-----~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...+.... ...+..+..+.+++.+||+.+|++||++.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 228 FQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000 001233556999999999999999999999875
No 287
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=5.7e-32 Score=296.77 Aligned_cols=253 Identities=24% Similarity=0.426 Sum_probs=198.7
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchh----------hHHHHHHHHHHhccCCcCceeeEEEEEecCC
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQ----------GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA 844 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 844 (1052)
+|.+.+.||+|+||.||+|.. .+++.||+|.+...... ..+.+..|++++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 477889999999999999954 46889999987542111 1346788999999999999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccc
Q 001562 845 EMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLAR 924 (1052)
Q Consensus 845 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~ 924 (1052)
..++||||+++++|.++++.. ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||++.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999999999775 4689999999999999999999999 99999999999999999999999999997
Q ss_pred ccccccc-ccccCccccccccccccccCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhC
Q 001562 925 LLEVSET-HATTDVAGTFGYVAPEYATTCR--VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEG 1001 (1052)
Q Consensus 925 ~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~--~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1052)
....... .......++..|+|||.+.... ++.++||||+|+++||+++|..||..... .+....... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~-~ 227 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA--------IAAMFKLGN-K 227 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch--------HHHHHHhhc-c
Confidence 5532211 1122345788999999987654 78899999999999999999999863211 111111111 1
Q ss_pred CccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1002 RSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1002 ~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.....+.+.. ....+..+.+++.+|++.+|++||+++|+++
T Consensus 228 ~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 228 RSAPPIPPDV----SMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred ccCCcCCccc----cccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 1111111211 1223456899999999999999999999986
No 288
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3e-32 Score=302.01 Aligned_cols=250 Identities=24% Similarity=0.394 Sum_probs=203.9
Q ss_pred CCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 775 GNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
++|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.++++++|||++++++++......++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 5789999999999999999964 467889999987655555677899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++++|.+++... .+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++........ .
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-~ 171 (293)
T cd06647 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 171 (293)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc-c
Confidence 999999999754 478999999999999999999999 999999999999999999999999999876543322 2
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhc
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWE 1013 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1013 (1052)
.....+++.|+|||.+.+..++.++||||||+++||+++|+.||....... ........+... .
T Consensus 172 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~--------~~~~~~~~~~~~--------~ 235 (293)
T cd06647 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR--------ALYLIATNGTPE--------L 235 (293)
T ss_pred cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh--------heeehhcCCCCC--------C
Confidence 233467889999999988889999999999999999999999997432210 000011111100 0
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1014 AGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1014 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
..+......+.+++.+||..+|++||++.++++.
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 236 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1122334568899999999999999999999864
No 289
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2e-32 Score=303.21 Aligned_cols=248 Identities=24% Similarity=0.381 Sum_probs=199.5
Q ss_pred CcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 777 FSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
|.....||+|+||.||+|... ++..||||++........+.+.+|+.+++.++|+|++++++.+...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 344467999999999999654 5889999998766655667789999999999999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
++|.+++.. ..+++.++..++.|++.|++|||++ +|+||||||+||++++++.++|+|||++....... ....
T Consensus 104 ~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~ 176 (292)
T cd06658 104 GALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-PKRK 176 (292)
T ss_pred CcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-ccCc
Confidence 999998854 3588999999999999999999999 99999999999999999999999999987553221 1223
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...++..|+|||.+.+..++.++||||+|+++|||++|+.||..... .+..... .... .+.+..
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--------~~~~~~~-~~~~-----~~~~~~-- 240 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP--------LQAMRRI-RDNL-----PPRVKD-- 240 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHH-HhcC-----CCcccc--
Confidence 34678899999999888899999999999999999999999874221 1111111 1110 111110
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
.......+.+++.+|+..||++|||++|+++.
T Consensus 241 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 241 SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11233458899999999999999999999864
No 290
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=7e-33 Score=312.71 Aligned_cols=240 Identities=24% Similarity=0.303 Sum_probs=186.3
Q ss_pred eeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccC---CcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 783 IGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRI---RHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 783 Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
||+|+||+||+|+.. +++.||+|++..... .....+..|..++... +||+|+++++++.+....|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999654 589999999864322 2233445566666655 699999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
|+|.+++... ..+++..+..++.||++|++|||++ +|+||||||+||+++.++.++|+|||++....... ....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~~ 154 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTN 154 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCcc
Confidence 9999998764 4689999999999999999999999 99999999999999999999999999987543221 2233
Q ss_pred CccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcC
Q 001562 936 DVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEA 1014 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1014 (1052)
...|++.|+|||++.+. .++.++||||+||++|||++|+.||.... ..+..+... .+... + ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~--------~~~~~~~i~-~~~~~--~----~~- 218 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED--------TQQMYRNIA-FGKVR--F----PK- 218 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC--------HHHHHHHHH-cCCCC--C----CC-
Confidence 45689999999998764 47899999999999999999999997421 122222221 11111 0 00
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCC----CHHHHHH
Q 001562 1015 GPQENLLGMMRLASTCTVETLSTRP----SVKQVLI 1046 (1052)
Q Consensus 1015 ~~~~~~~~l~~Li~~cl~~dP~~RP----s~~eil~ 1046 (1052)
......+.+++.+|++.||++|| ++.|+++
T Consensus 219 --~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 219 --NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred --ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 11234578999999999999998 4555544
No 291
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.2e-32 Score=302.37 Aligned_cols=247 Identities=23% Similarity=0.368 Sum_probs=199.1
Q ss_pred CcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 777 FSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
|+....||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++++..++..++|+||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 334457999999999999654 6899999998765555567788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||++....... ....
T Consensus 103 ~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~ 175 (297)
T cd06659 103 GALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRK 175 (297)
T ss_pred CCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc-cccc
Confidence 999998865 3589999999999999999999999 99999999999999999999999999987554222 2223
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...++..|+|||.+.+..++.++||||+|+++|||++|+.||..... .+..+.. ....... . ..
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--------~~~~~~~-~~~~~~~--~-----~~ 239 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP--------VQAMKRL-RDSPPPK--L-----KN 239 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHH-hccCCCC--c-----cc
Confidence 35688999999999988899999999999999999999999873211 1111111 1111000 0 01
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.......+.+++.+|++.+|++||++.++++
T Consensus 240 ~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 240 AHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 1122345889999999999999999999987
No 292
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=5e-32 Score=299.98 Aligned_cols=262 Identities=25% Similarity=0.360 Sum_probs=201.7
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++|+||+++++++.+++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36889999999999999999765 57899999886532 2334678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|++++.+..+.... ..+++.++..++.|++.|++|||+. +++|||++|+||++++++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 99887766655443 4589999999999999999999999 999999999999999999999999999987654433
Q ss_pred ccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH-----------
Q 001562 932 HATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIK----------- 999 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 999 (1052)
.......++..|+|||++.+. .++.++||||+|+++|||++|+.||...... +..........
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI-----DQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCCHHHhhhcc
Confidence 233445678899999999888 7889999999999999999999998643211 00000000000
Q ss_pred -hCCc-----cccccch-hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1000 -EGRS-----SELFLPE-LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1000 -~~~~-----~~~~~~~-l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.... ....++. .....+...+..+.+++.+||..+|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000 0000000 001112223567999999999999999999999875
No 293
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4.1e-32 Score=298.35 Aligned_cols=254 Identities=28% Similarity=0.461 Sum_probs=201.8
Q ss_pred HhhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEEEecCC-----
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEA----- 844 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~----- 844 (1052)
.+.++|++.+.||+|++|.||+|... +++.+++|++..... ..+++.+|+++++++ .|+|++++++++.+..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35678999999999999999999764 578899998876543 346789999999999 6999999999997644
Q ss_pred -eEEEEEeecCCCCHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecc
Q 001562 845 -EMFLVYNFLSGGNLETFIHKKS--GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFG 921 (1052)
Q Consensus 845 -~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfg 921 (1052)
..++||||+++++|.++++... ...+++..+..++.|+++|++|||+. +++||||+|+||++++++.++|+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCc
Confidence 4899999999999999987643 46789999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccccccCccccccccccccccC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHH
Q 001562 922 LARLLEVSETHATTDVAGTFGYVAPEYATT-----CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKL 996 (1052)
Q Consensus 922 la~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 996 (1052)
.+....... .......++..|+|||.+.. ..++.++||||+|+++|||++|+.||...... .. ...
T Consensus 159 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~-~~~ 229 (275)
T cd06608 159 VSAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-------RA-LFK 229 (275)
T ss_pred cceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-------HH-HHH
Confidence 987654322 22234568889999998754 34677899999999999999999999632111 11 111
Q ss_pred HHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 997 LIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 997 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. ..+... .. ..+......+.+++.+|+..||++|||+.|+++
T Consensus 230 ~-~~~~~~-----~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 230 I-PRNPPP-----TL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred h-hccCCC-----CC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1 111111 11 112234556899999999999999999999976
No 294
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=3.7e-35 Score=318.69 Aligned_cols=372 Identities=28% Similarity=0.366 Sum_probs=301.2
Q ss_pred cCCCCccEEEccCcccc-ccCCccccCcCcCCeEecccccccccCCccccCCCCCcEEEccCCcccCccccCCCcccCCC
Q 001562 144 GELRLLEVLELQGNNFS-GKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGNGELSVIDMSSNRLSGGLAIDSSSECEFL 222 (1052)
Q Consensus 144 ~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L 222 (1052)
+-|+-.+-.|+++|.++ +..|.....+++++.|-|...++. .+|+.++.+.+|++|.+++|++.. ....++.++.|
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~--vhGELs~Lp~L 80 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS--VHGELSDLPRL 80 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh--hhhhhccchhh
Confidence 34556777899999999 578999999999999999999998 899999999999999999999975 23456788999
Q ss_pred CEEEccCCcCCC-CCCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEEEccCCCCCCCCCcccccCCCCCeeeccc
Q 001562 223 TYLKLSDNFLTE-SIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVLDVSRNSLTDRIPVELADCSKLSVLVLTN 301 (1052)
Q Consensus 223 ~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 301 (1052)
+.+++.+|++.. -+|..+..+..|+.|+|++|+++ ..|..+..-+++-+|+||+|+|..++..-|.+++.|-.|+|++
T Consensus 81 Rsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~ 159 (1255)
T KOG0444|consen 81 RSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSN 159 (1255)
T ss_pred HHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhcccc
Confidence 999999999863 37888899999999999999998 7899999999999999999999864445578899999999988
Q ss_pred CcccccCCCCCCccccccCCCchhhhcccCCcEeecCCCCCcccCCccccCCCCccEEeCCCCccc-ccCCccccccCCC
Q 001562 302 IDASLDLDNSRGEFSAFDGGVPYELLLSRSLEVLWAPRANLGGRLPDNWSESCSLKVLNLGQNSLK-GAVPKSLGMCRNL 380 (1052)
Q Consensus 302 n~~~~~l~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~Ls~N~l~-~~~p~~~~~l~~L 380 (1052)
|++. .+|+.+..+..|+.|.|++|.+...--..+-.|++|++|.+++.+=+ ..+|.++..|.+|
T Consensus 160 NrLe---------------~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL 224 (1255)
T KOG0444|consen 160 NRLE---------------MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNL 224 (1255)
T ss_pred chhh---------------hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhh
Confidence 7754 45666666666666666666655433333344556666666665433 3456666666666
Q ss_pred CEEeCCCCcCccCCCCCCCCCccceEecccCccccCCCCCccccccccCCccccccccccccCcccccceeeeeeccCCc
Q 001562 381 TYLDLSLNNLEGYLPMQLPVPCMVYFNVSQNNITGVLPRFENVSCDNHFGFQDLQYANVPVMGSISDENFVIIHDFSGNK 460 (1052)
Q Consensus 381 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~ls~n~ 460 (1052)
..+|||.|.+.-. |..
T Consensus 225 ~dvDlS~N~Lp~v-Pec--------------------------------------------------------------- 240 (1255)
T KOG0444|consen 225 RDVDLSENNLPIV-PEC--------------------------------------------------------------- 240 (1255)
T ss_pred hhccccccCCCcc-hHH---------------------------------------------------------------
Confidence 6666666655421 110
Q ss_pred cccccCcccccccccccccchhHHhhccCCcccCCCCCccccccCCCcceEEecCcccccccchHHHHhcCCCceEEEcc
Q 001562 461 FLGSLPLFAIGDGFLAAKYKPHYRLLLNNNMFNGSVPGERISKCNDLQSFSVNLSANLLSGMSYEAFLLDCVQLVEFEAA 540 (1052)
Q Consensus 461 ~~g~~p~~~~~~~~~~~~~~~~~~l~l~~n~~~~~~p~~~~~~~~~l~~~~l~l~~n~l~~~~~~~~~~~~~~L~~L~l~ 540 (1052)
...+.+|+.|+|+
T Consensus 241 -------------------------------------------------------------------ly~l~~LrrLNLS 253 (1255)
T KOG0444|consen 241 -------------------------------------------------------------------LYKLRNLRRLNLS 253 (1255)
T ss_pred -------------------------------------------------------------------HhhhhhhheeccC
Confidence 1234577788888
Q ss_pred CcccccccccccCCCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCCccC-CcCchhhcCCcCCcEEEcCCCCCCCC
Q 001562 541 NNQISGSIAAGVGKLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGNNLT-GEIPSQFGHLISLVVLDLSHNALTGS 619 (1052)
Q Consensus 541 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~ 619 (1052)
+|+|+ ......+.-.+|++|+|+.|+++ .+|+.+.+|++|+.|++.+|+++ .-+|..++.+.+|+.+..++|.+. .
T Consensus 254 ~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-l 330 (1255)
T KOG0444|consen 254 GNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-L 330 (1255)
T ss_pred cCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-c
Confidence 88887 45555666778999999999999 99999999999999999999987 248999999999999999999999 8
Q ss_pred CcchhcccccccceeccCCcCCCCCCcccccccccCeEecccCcCCCCCC
Q 001562 620 IPASLTKATKLESLFLAHNRLSGEIPVSFSTLVNLSALDLSFNNLSGHIP 669 (1052)
Q Consensus 620 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 669 (1052)
+|+.++.+.+|+.|.|++|++- .+|..+.-|+.|+.|||..|+=--.+|
T Consensus 331 VPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 331 VPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred CchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCC
Confidence 9999999999999999999998 799999999999999999998665555
No 295
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=7.2e-32 Score=295.31 Aligned_cols=252 Identities=24% Similarity=0.423 Sum_probs=201.4
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCch------hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRF------QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
+|+..+.||+|+||.||+|.. .+++.||+|++..... ...+.+..|++++++++|+|++++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 478889999999999999964 5689999998864331 234678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC-cEEEEecccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL-NAYLSDFGLARLLE 927 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~-~~kl~Dfgla~~~~ 927 (1052)
|+||+++++|.+++... ..+++..+..++.|++.|++|||++ +++||||+|+||+++.++ .++|+|||.+....
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 99999999999999764 4688999999999999999999999 999999999999998776 59999999998665
Q ss_pred cccc---ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcc
Q 001562 928 VSET---HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSS 1004 (1052)
Q Consensus 928 ~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
.... .......++..|+|||.+.+..++.++||||+|+++|+|++|..||...... ........... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~-~~~~ 229 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS-----NHLALIFKIAS-ATTA 229 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc-----chHHHHHHHhc-cCCC
Confidence 3321 1122346788999999998888999999999999999999999998632211 11111111111 1111
Q ss_pred ccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1005 ELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1005 ~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...+......+.+++.+|+..+|++||++.|+++
T Consensus 230 --------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 230 --------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred --------CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 1223344566889999999999999999999875
No 296
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.7e-32 Score=295.54 Aligned_cols=249 Identities=26% Similarity=0.392 Sum_probs=202.9
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+|++.+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++|+|++++++.+.+....++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4788899999999999999664 57889999886542 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCc-EEEEecccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELN-AYLSDFGLARLLEVSET 931 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~-~kl~Dfgla~~~~~~~~ 931 (1052)
+++++|.+++.......+++..+..++.|+++|++|||+. +++|+||+|+||++++++. ++++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 9999999999876555689999999999999999999999 9999999999999998864 69999999986643221
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
......|++.|+|||...+..++.++||||||+++|||++|+.||... ...++........ ..
T Consensus 158 -~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~~-~~------- 220 (257)
T cd08225 158 -LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN--------NLHQLVLKICQGY-FA------- 220 (257)
T ss_pred -cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc--------cHHHHHHHHhccc-CC-------
Confidence 222345788999999999888999999999999999999999998632 1222333222211 11
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+...+..+.+++.+|++.+|++||++.|+++
T Consensus 221 --~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 221 --PISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 111223446899999999999999999999986
No 297
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=8.4e-32 Score=300.53 Aligned_cols=253 Identities=23% Similarity=0.316 Sum_probs=199.5
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
+|++.+.||+|+||.||+|... .++.||+|.+..... .....+.+|+++++.++||||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 6888999999999999999765 478999998865432 234577889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc-
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE- 930 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~- 930 (1052)
|+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||+++......
T Consensus 82 ~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 82 YVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 99999999999765 4689999999999999999999999 99999999999999999999999999986421110
Q ss_pred -------------cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH
Q 001562 931 -------------THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLL 997 (1052)
Q Consensus 931 -------------~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
........++..|+|||.+.+..++.++|+||||+++|||++|+.||.... ..++....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~--------~~~~~~~~ 228 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT--------PEELFGQV 228 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHH
Confidence 001112356789999999998889999999999999999999999986321 11222222
Q ss_pred HHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 998 IKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 998 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
..... . .+. .+...+..+.+++.+||+.+|++||++.++.+.++
T Consensus 229 ~~~~~-~---~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 229 ISDDI-E---WPE----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred Hhccc-C---CCC----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 22111 1 011 01123445889999999999999999655555443
No 298
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=6.5e-32 Score=299.17 Aligned_cols=243 Identities=27% Similarity=0.413 Sum_probs=200.2
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36889999999999999999665 58999999886432 233467889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++++|.+++... ..+++..+..++.|+++|++|||+. +|+||||+|+||++++++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999999775 4689999999999999999999999 9999999999999999999999999999866433
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
.....+++.|+|||.+.+...+.++||||+|+++|+|++|+.||.... ..+..+... .+...
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~~------ 216 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN--------PIQIYEKIL-EGKVR------ 216 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHh-cCCcc------
Confidence 233467899999999988888999999999999999999999987432 111111111 11111
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHH
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRP-----SVKQVL 1045 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RP-----s~~eil 1045 (1052)
.+......+.+++.+||..+|++|| +++|++
T Consensus 217 ----~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 217 ----FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred ----CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 1122244588999999999999999 677765
No 299
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.1e-31 Score=293.08 Aligned_cols=251 Identities=29% Similarity=0.436 Sum_probs=206.8
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
+|++.+.||+|++|.||+|... +++.||+|++..... ....++.+|++.+++++|+|++++++++......++|+||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 6888999999999999999766 489999999876644 34578899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHY-SCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
++++|.+++... ..+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.+.........
T Consensus 82 ~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 82 DGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 999999999865 568999999999999999999999 8 9999999999999999999999999999866432222
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
.....++..|+|||.+.+..++.++|+||||+++|||++|+.||..... ....+..+....... +.
T Consensus 157 -~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~------~~-- 222 (264)
T cd06623 157 -CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ-----PSFFELMQAICDGPP------PS-- 222 (264)
T ss_pred -ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc-----cCHHHHHHHHhcCCC------CC--
Confidence 2234578899999999998899999999999999999999999875432 111222222221111 11
Q ss_pred cCCCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1013 EAGPQE-NLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1013 ~~~~~~-~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
.+.. .+..+.+++.+|++.+|++||++.|+++.
T Consensus 223 --~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 223 --LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1122 44569999999999999999999999863
No 300
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=4.7e-32 Score=299.53 Aligned_cols=259 Identities=28% Similarity=0.391 Sum_probs=198.8
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+|++.+.||+|++|.||+|... +++.||||++..... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788999999999999999664 688999998865432 2235788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+. ++|.+++.......+++..+..++.|+++|++|||+. +++||||+|+||++++++.++|+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~- 155 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR- 155 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc-
Confidence 95 6899999876666789999999999999999999999 999999999999999999999999999876543221
Q ss_pred cccCccccccccccccccCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch-
Q 001562 933 ATTDVAGTFGYVAPEYATTCR-VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE- 1010 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~-~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1010 (1052)
......+++.|+|||.+.+.. ++.++||||||+++|||+||+.||...... ....+.....+.......+.
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-------DQLFRIFRTLGTPDEVVWPGV 228 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHHHhCCCChhhhhhh
Confidence 122234678899999887654 578999999999999999999998643211 11111111111111100000
Q ss_pred ----------------hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1011 ----------------LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1011 ----------------l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
......+.....+.+++.+|++.||++||+++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 229 TSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000001122345789999999999999999999875
No 301
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=4.4e-32 Score=296.33 Aligned_cols=249 Identities=27% Similarity=0.433 Sum_probs=201.6
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEec--CCeEEEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVG--EAEMFLVY 850 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 850 (1052)
+|++.+.||.|+||.||+|.. .+++.||+|++.... ....+++..|++++++++|||++++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 478889999999999999954 467899999886432 3345678889999999999999999998764 45689999
Q ss_pred eecCCCCHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHH-----hcCCCCeeecCCCCCCEEECCCCcEEEEecccc
Q 001562 851 NFLSGGNLETFIHKKS--GKKIQWSVIHKIAIDIAQALAYLH-----YSCVPRIVHRDIKPSNILLDEELNAYLSDFGLA 923 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh-----~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla 923 (1052)
||+++++|.+++.... ...+++..+..++.|+++|++||| +. +|+|+||+|+||++++++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccccc
Confidence 9999999999997642 357899999999999999999999 66 9999999999999999999999999999
Q ss_pred ccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCc
Q 001562 924 RLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRS 1003 (1052)
Q Consensus 924 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
........ ......+++.|+|||.+.+..++.++|+||||+++|+|++|+.||.... ..+..+. ...+..
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~-~~~~~~ 227 (265)
T cd08217 158 KILGHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--------QLQLASK-IKEGKF 227 (265)
T ss_pred ccccCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--------HHHHHHH-HhcCCC
Confidence 87653322 1233468899999999999889999999999999999999999997432 1122222 121111
Q ss_pred cccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1004 SELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1004 ~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...+...+..+.+++.+|++.+|++||++.++++
T Consensus 228 ---------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 228 ---------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred ---------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 1123344556899999999999999999999986
No 302
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-33 Score=295.98 Aligned_cols=248 Identities=26% Similarity=0.344 Sum_probs=203.0
Q ss_pred hhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
..+.|+.-++||+|+||+||-++.+ +|+.+|.|++.+.+. +...-...|-+++.+++.+.||.+--+|+..+..|+
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 3456788899999999999999654 699999998854432 223456789999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
|+..|.||+|.-++.......++++.+.-+|.+|+.||++||.. +||.||+||+|||+|+.|+++|+|.|+|..+..
T Consensus 263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 99999999999999888778899999999999999999999999 999999999999999999999999999998764
Q ss_pred cccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
... ....+||.+|||||++....|+...|-||+||++|||+.|+.||....+. .. .+.+...... +
T Consensus 340 g~~--~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK----vk-~eEvdrr~~~-------~ 405 (591)
T KOG0986|consen 340 GKP--IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK----VK-REEVDRRTLE-------D 405 (591)
T ss_pred CCc--cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh----hh-HHHHHHHHhc-------c
Confidence 433 34458999999999999999999999999999999999999999732211 00 1111111111 1
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRPS 1040 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs 1040 (1052)
+ ..++....++..++.+..++.||++|.-
T Consensus 406 ~---~ey~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 406 P---EEYSDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred h---hhcccccCHHHHHHHHHHHccCHHHhcc
Confidence 1 1233444556788888999999999973
No 303
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1e-31 Score=296.58 Aligned_cols=247 Identities=23% Similarity=0.361 Sum_probs=201.1
Q ss_pred CcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 777 FSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
|...+.||+|++|.||+|.. .+++.+++|++........+.+.+|+.+++.++|||++++++++...+..++++||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 44557999999999999965 46889999998765555556788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
++|.+++.. ..++++.+..++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||.+...... .....
T Consensus 101 ~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~-~~~~~ 173 (285)
T cd06648 101 GALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE-VPRRK 173 (285)
T ss_pred CCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccC-Ccccc
Confidence 999999876 3589999999999999999999999 9999999999999999999999999988755322 12223
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...|++.|+|||.+.+..++.++||||+|+++|||++|+.||.... ..+..+..... .... . ..
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~--------~~~~~~~~~~~-~~~~-----~--~~ 237 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP--------PLQAMKRIRDN-LPPK-----L--KN 237 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC--------HHHHHHHHHhc-CCCC-----C--cc
Confidence 3468899999999998889999999999999999999999986421 12222222211 1110 0 01
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+...+..+.+++.+||+.+|++||++.++++
T Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 238 LHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 1123456899999999999999999999985
No 304
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-32 Score=304.78 Aligned_cols=245 Identities=25% Similarity=0.431 Sum_probs=195.9
Q ss_pred cccceeeecCceEEEEE-EecCCeEEEEEEec---c-CchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCe--EEEEE
Q 001562 778 SIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLS---I-GRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAE--MFLVY 850 (1052)
Q Consensus 778 ~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~---~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~ 850 (1052)
+...+||+|+|-+||+| +-.+|..||=-.++ . ......++|..|+.+|+.++||||++++.++.+... .-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 44578999999999999 43456666522221 1 123346889999999999999999999999987654 78899
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC-CcEEEEecccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE-LNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~-~~~kl~Dfgla~~~~~~ 929 (1052)
|.+..|+|..|.++++ ..+...+.+|++||++||.|||++ .|+|||||||..||+|+.+ |.|||+|+|+|.....+
T Consensus 123 EL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred ecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 9999999999999874 688899999999999999999998 6689999999999999754 89999999999977532
Q ss_pred ccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 930 ETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 930 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
+. ..++|||.|||||... ..|....||||||+.+.||+|+..||.... ...+..+.+....++ ..+.+
T Consensus 200 --~a-ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~-------n~AQIYKKV~SGiKP-~sl~k 267 (632)
T KOG0584|consen 200 --HA-KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT-------NPAQIYKKVTSGIKP-AALSK 267 (632)
T ss_pred --cc-ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC-------CHHHHHHHHHcCCCH-HHhhc
Confidence 22 2378999999999988 579999999999999999999999987543 344555555443322 22211
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
-..+ ++.++|.+|+.. .++|||+.|+++
T Consensus 268 ----V~dP----evr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 268 ----VKDP----EVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred ----cCCH----HHHHHHHHHhcC-chhccCHHHHhh
Confidence 1122 388999999999 999999999985
No 305
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.8e-32 Score=299.31 Aligned_cols=259 Identities=22% Similarity=0.336 Sum_probs=196.4
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh-hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ-GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
++|++.+.||+|++|.||+|... +++.||+|.+...... ....+.+|++++++++|+||+++++++.++...++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57899999999999999999665 6889999998654322 234567899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
++ ++|.+++.... ..+++..+..++.|+++|+.|||+. +|+||||||+||++++++.++|+|||+++...... .
T Consensus 85 ~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-~ 158 (291)
T cd07844 85 LD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-K 158 (291)
T ss_pred CC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC-c
Confidence 96 59999987654 4689999999999999999999999 99999999999999999999999999987543211 1
Q ss_pred cccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHh-CCcccccc--
Q 001562 933 ATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKE-GRSSELFL-- 1008 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 1008 (1052)
......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||...... .+..+..... +.......
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV-------EDQLHKIFRVLGTPTEETWPG 231 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH-------HHHHHHHHHhcCCCChhhhhh
Confidence 1122346788999999875 45788999999999999999999999643211 1111111100 00000000
Q ss_pred -----------------chhhcCC-CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1009 -----------------PELWEAG-PQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1009 -----------------~~l~~~~-~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+.... .......+.+++.+|++.+|++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 232 VSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000 0111256789999999999999999999875
No 306
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.5e-31 Score=296.57 Aligned_cols=261 Identities=21% Similarity=0.327 Sum_probs=197.3
Q ss_pred hhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhh-HHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQG-IQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
+.++|++.+.||+|+||.||+|.. .+++.||+|++....... ...+.+|+++++.++|+||+++++++.++...++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 356899999999999999999965 468899999986543322 346788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+. +++.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||+++......
T Consensus 83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 83 EYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred eccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 9995 78888776543 4578888999999999999999999 99999999999999999999999999997543221
Q ss_pred cccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH-hCCcc----
Q 001562 931 THATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIK-EGRSS---- 1004 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---- 1004 (1052)
.......+++.|+|||.+.+. .++.++||||+|+++|||++|+.||+..... .+.....+. .+...
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~-------~~~~~~~~~~~~~~~~~~~ 229 (291)
T cd07870 158 -QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV-------FEQLEKIWTVLGVPTEDTW 229 (291)
T ss_pred -CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH-------HHHHHHHHHHcCCCChhhh
Confidence 112334568899999998764 4788999999999999999999999743221 111111110 00000
Q ss_pred ------ccccchhhcCC----------CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1005 ------ELFLPELWEAG----------PQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1005 ------~~~~~~l~~~~----------~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
....+...... .......+.+++.+|+..||++|||+.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 230 PGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000000 0012356889999999999999999999874
No 307
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.7e-31 Score=293.86 Aligned_cols=246 Identities=25% Similarity=0.418 Sum_probs=200.3
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
-|++.+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|++++++++|||++++++++.++...++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 477889999999999999965 4688999998865432 33467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 85 ~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-~~ 157 (277)
T cd06641 85 GGGSALDLLEPG---PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IK 157 (277)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch-hh
Confidence 999999998653 588999999999999999999999 99999999999999999999999999987654322 12
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhc
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWE 1013 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1013 (1052)
.....++..|+|||.+.+..++.++|+||+||++|||++|..||..... ..+.... ..+.. +.
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~-~~~~~-----~~--- 220 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP--------MKVLFLI-PKNNP-----PT--- 220 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch--------HHHHHHH-hcCCC-----CC---
Confidence 2234578899999999988889999999999999999999999863211 1111111 11111 11
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1014 AGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1014 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+...+..+.+++.+|++.+|++||++.++++
T Consensus 221 -~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 221 -LEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred -CCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 12233455889999999999999999999987
No 308
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.1e-31 Score=298.84 Aligned_cols=258 Identities=24% Similarity=0.314 Sum_probs=198.4
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh-----hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ-----GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
+|++.+.||+|+||.||+|... +++.||+|++...... ....+..|++++++++|+||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4788899999999999999754 6899999998755432 234567899999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
|||+ +++|.+++.... ..+++..+..++.|+++|++|||++ +|+||||+|+||+++.++.++|+|||++......
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 999999997653 4689999999999999999999999 9999999999999999999999999999876533
Q ss_pred ccccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHh-CCccc--
Q 001562 930 ETHATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKE-GRSSE-- 1005 (1052)
Q Consensus 930 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-- 1005 (1052)
.. ......+++.|+|||.+.+ ..++.++|||||||++|||++|.+||...... .. ....... +....
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~ 226 (298)
T cd07841 156 NR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-------DQ-LGKIFEALGTPTEEN 226 (298)
T ss_pred Cc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-------HH-HHHHHHHcCCCchhh
Confidence 22 2222346788999998865 45788999999999999999997777532211 11 1111110 00000
Q ss_pred ---------cccchhhcCC-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1006 ---------LFLPELWEAG-----PQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1006 ---------~~~~~l~~~~-----~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
.......... .......+.+++.+||+.||++||++.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 227 WPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000 12234568899999999999999999999863
No 309
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1e-31 Score=298.11 Aligned_cols=258 Identities=24% Similarity=0.301 Sum_probs=198.3
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh--hHHHHHHHHHHhccCCcCceeeEEEEEecC--CeEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIRHKNLVTLIGYYVGE--AEMFLV 849 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 849 (1052)
++|++.+.||+|+||.||+|... +++.+|+|.++..... ....+.+|++++++++||||+++++++... ...|+|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46889999999999999999765 5889999998654322 234567899999999999999999998877 889999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
+||++ ++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||++......
T Consensus 85 ~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 99996 59999987654 4689999999999999999999999 9999999999999999999999999999866533
Q ss_pred ccccccCccccccccccccccCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHh--------
Q 001562 930 ETHATTDVAGTFGYVAPEYATTCR-VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKE-------- 1000 (1052)
Q Consensus 930 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------- 1000 (1052)
. .......+++.|+|||.+.+.. ++.++|+||+|+++|||++|+.||...... +........
T Consensus 160 ~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~--------~~~~~~~~~~~~~~~~~ 230 (293)
T cd07843 160 L-KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI--------DQLNKIFKLLGTPTEKI 230 (293)
T ss_pred c-cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHHHhCCCchHH
Confidence 2 1222345778999999987644 688999999999999999999998743211 111111100
Q ss_pred ------------CCccccccchhhcCCCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1001 ------------GRSSELFLPELWEAGPQE-NLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1001 ------------~~~~~~~~~~l~~~~~~~-~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..........+....+.. ....+.+++.+|++.+|++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 231 WPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000111111111 3556889999999999999999999975
No 310
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=7.2e-32 Score=296.84 Aligned_cols=247 Identities=26% Similarity=0.431 Sum_probs=198.8
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc-hhhHHHHHHHHHHhccCC---cCceeeEEEEEecCCeEEEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIR---HKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 850 (1052)
.|++.+.||+|+||.||+|.. .+++.||+|.+.... ....+++.+|+.++++++ |||++++++++.++...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477889999999999999975 468999999886542 334567888999999986 999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++++|.++++.. .+++..+..++.|+++|+.|||+. +|+||||+|+||++++++.++|+|||.+.......
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999998653 589999999999999999999999 99999999999999999999999999998765333
Q ss_pred cccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 931 THATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
.......|+..|+|||.+.++ .++.++||||||+++|+|++|+.||...... ...... ... ..+
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--------~~~~~~-~~~-----~~~ 220 (277)
T cd06917 156 -SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF--------RAMMLI-PKS-----KPP 220 (277)
T ss_pred -cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh--------hhhhcc-ccC-----CCC
Confidence 222334688899999988754 4688999999999999999999999743211 111110 011 011
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+... ..+..+.+++.+||+.||++||++.|+++
T Consensus 221 ~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 221 RLEDN---GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 11111 13456889999999999999999999975
No 311
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.6e-31 Score=295.58 Aligned_cols=252 Identities=26% Similarity=0.403 Sum_probs=205.3
Q ss_pred hhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
..+.|+..+.||+|+||.||+|... ++..||+|++..... ..+.+.+|++.+++++|+|++++++++......++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4456888899999999999999776 688999999976554 45778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. ||+|+||+|+||+++.++.++|+|||.+.......
T Consensus 96 ~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~- 170 (286)
T cd06614 96 YMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK- 170 (286)
T ss_pred ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccch-
Confidence 999999999998764 4799999999999999999999998 99999999999999999999999999987554221
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
.......++..|++||.+.+..++.++||||||+++|||++|+.||....+. ......... .....
T Consensus 171 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--------~~~~~~~~~-~~~~~----- 236 (286)
T cd06614 171 SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--------RALFLITTK-GIPPL----- 236 (286)
T ss_pred hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhc-CCCCC-----
Confidence 1222335778999999999888999999999999999999999998632111 111111111 11110
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+...+..+.+++.+|++.+|.+||++.++++
T Consensus 237 --~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 237 --KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred --cchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 011223456899999999999999999999975
No 312
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.9e-31 Score=298.02 Aligned_cols=247 Identities=30% Similarity=0.384 Sum_probs=197.6
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
...|++.+.||+|+||.||+|... +++.||+|++..... ...+++.+|+++++.++|||++++++++.+++..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 356888999999999999999664 589999998864322 2345688999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
+||++ |++.+++.... ..+++..+..++.|++.|+.|||+. +|+||||+|+||++++++.++|+|||++......
T Consensus 94 ~e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 94 MEYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HHhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 99995 68888776543 4689999999999999999999999 9999999999999999999999999998754322
Q ss_pred ccccccCcccccccccccccc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 930 ETHATTDVAGTFGYVAPEYAT---TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 930 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
....+++.|+|||.+. ...++.++||||||+++|||++|+.||..... ....... ..+...
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~--------~~~~~~~-~~~~~~-- 232 (307)
T cd06607 169 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------MSALYHI-AQNDSP-- 232 (307)
T ss_pred -----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH--------HHHHHHH-hcCCCC--
Confidence 2345778999999874 45678899999999999999999999863211 1111111 111111
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
...+...+..+.+++.+||+.+|++||++.++++.
T Consensus 233 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 233 ------TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred ------CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 01122345568999999999999999999999863
No 313
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.9e-32 Score=276.70 Aligned_cols=264 Identities=25% Similarity=0.361 Sum_probs=206.6
Q ss_pred hhhHHHhhCCCcccceeeecCceEEEEE-EecCCeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEEEecCC
Q 001562 767 YDNVVRATGNFSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEA 844 (1052)
Q Consensus 767 ~~~~~~~~~~~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 844 (1052)
+.++.+.++ +.||+|+|+.|-.+ ...+|..||||++.+.......++.+|++++... .|+||+.++++|++++
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 445444443 68999999999988 5678999999999888777788999999999998 5999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCc---EEEEecc
Q 001562 845 EMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELN---AYLSDFG 921 (1052)
Q Consensus 845 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~---~kl~Dfg 921 (1052)
.+|+|||.|.||+|..+++++ ..+++.++.++.++|+.||.+||.+ ||.|||+||+|||-.+... +|||||.
T Consensus 150 ~FYLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfD 224 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFD 224 (463)
T ss_pred eEEEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccc
Confidence 999999999999999999887 4699999999999999999999999 9999999999999976544 7999999
Q ss_pred ccccccccc------cccccCcccccccccccccc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc------cC
Q 001562 922 LARLLEVSE------THATTDVAGTFGYVAPEYAT-----TCRVSDKADVYSFGVVLLELISGKRSLDPSFS------EY 984 (1052)
Q Consensus 922 la~~~~~~~------~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDv~slG~il~elltg~~p~~~~~~------~~ 984 (1052)
++.-+.... +......+|+..|||||+.. .-.|+.+.|.||+|||+|-|+.|.+||.+.-. ..
T Consensus 225 LgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrG 304 (463)
T KOG0607|consen 225 LGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRG 304 (463)
T ss_pred cccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCC
Confidence 886543211 11223457889999999864 23467899999999999999999999965432 22
Q ss_pred CCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 985 GNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+....-.+..-..+.+|+..- -..=| .....+..++++..+-.|+.+|.++.+++.
T Consensus 305 e~Cr~CQ~~LFesIQEGkYeF--PdkdW----ahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 305 EVCRVCQNKLFESIQEGKYEF--PDKDW----AHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CccHHHHHHHHHHHhccCCcC--Chhhh----HHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 223333333334445554431 11112 223445778888999999999999988765
No 314
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.98 E-value=2.6e-31 Score=287.81 Aligned_cols=249 Identities=29% Similarity=0.456 Sum_probs=205.4
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecC
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
+|++.+.||+|++|.||+|... +++.+++|++..........+.+|++.+++++|++++++++++..+...++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4778899999999999999765 688999999977665566789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT 934 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 934 (1052)
+++|.+++.... ..+++..+..++.|+++|+++||+. +++||||+|+||++++++.++|+|||.+........ .
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~ 154 (253)
T cd05122 81 GGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--R 154 (253)
T ss_pred CCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc--c
Confidence 999999997753 5689999999999999999999998 999999999999999999999999999987654332 3
Q ss_pred cCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcC
Q 001562 935 TDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEA 1014 (1052)
Q Consensus 935 ~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1014 (1052)
....++..|+|||.+.+..++.++||||||+++|+|++|+.||.... ..+....... ...... .
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~-~~~~~~-----~-- 218 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELP--------PMKALFKIAT-NGPPGL-----R-- 218 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCc--------hHHHHHHHHh-cCCCCc-----C--
Confidence 34567889999999998888999999999999999999999987321 1111111111 111111 0
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1015 GPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1015 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+...+..+.+++.+|++.||++|||+.|+++
T Consensus 219 ~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 219 NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred cccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 01112456899999999999999999999875
No 315
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.98 E-value=5.6e-32 Score=299.52 Aligned_cols=253 Identities=27% Similarity=0.387 Sum_probs=195.2
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch-hhHHHHHHHHHHhccCC-cCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIR-HKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+|+..+.||+|+||.||++... +++.||+|++..... .....+.+|+..+.++. |+||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4666788999999999999654 589999999865432 34567889999999996 99999999999998999999999
Q ss_pred cCCCCHHHHH---hhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 853 LSGGNLETFI---HKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 853 ~~~gsL~~~l---~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
+. +++.++. .......+++..+.+++.|+++|++|||+.. +|+||||||+||+++.++.++|+|||++......
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 85 5665543 2233456899999999999999999999743 8999999999999999999999999999765422
Q ss_pred ccccccCccccccccccccccCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 930 ETHATTDVAGTFGYVAPEYATTC---RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 930 ~~~~~~~~~g~~~y~aPE~~~~~---~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
. ......++..|+|||.+.+. .++.++||||+||++|||++|+.||.... ...+.........
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~~~----- 227 (288)
T cd06616 162 I--AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-------SVFDQLTQVVKGD----- 227 (288)
T ss_pred C--ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-------hHHHHHhhhcCCC-----
Confidence 2 11223578899999999876 68889999999999999999999986421 1111111111111
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+.+....+...+..+.+++.+||+.+|++||+++++++
T Consensus 228 -~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 228 -PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred -CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111222222334556999999999999999999999886
No 316
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.98 E-value=8.7e-32 Score=297.21 Aligned_cols=258 Identities=26% Similarity=0.350 Sum_probs=198.0
Q ss_pred CcccceeeecCceEEEEEEec-CCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 777 FSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
|++.+.||.|++|.||+|... +|+.||+|++..... ...+.+.+|++++++++|||++++++++.+.+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 677899999999999999654 689999999865432 22356788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
+++|.+++.......+++..+.+++.|+++|++|||+. +++||||+|+||+++.++.++|+|||.+........ .
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~ 155 (283)
T cd07835 81 -DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR-T 155 (283)
T ss_pred -CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-c
Confidence 57999999876555789999999999999999999999 999999999999999999999999999976542211 1
Q ss_pred ccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc-----
Q 001562 934 TTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF----- 1007 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 1007 (1052)
.....++..|+|||++.+. .++.++||||+|+++|||++|+.||...... .+..+.....+......
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI-------DQLFRIFRTLGTPDEDVWPGVT 228 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHHHhCCCChHHhhhhh
Confidence 2223567899999988664 4688999999999999999999998643211 11111111000000000
Q ss_pred ------------cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1008 ------------LPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1008 ------------~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...............+.+++.+|++.||++||+++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 229 SLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000111223356889999999999999999999975
No 317
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.98 E-value=2e-31 Score=294.25 Aligned_cols=251 Identities=26% Similarity=0.425 Sum_probs=193.4
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch-hhHHHHHHHHHH-hccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF-QGIQQFDAEIGT-LGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
++|++.+.||+|+||.||+|... +|+.||+|++..... +...++..|+.. ++..+|||++++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36889999999999999999665 589999999875432 233455556554 666789999999999999999999999
Q ss_pred ecCCCCHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 852 FLSGGNLETFIHKK--SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
|++ |+|.+++... ....+++..+..++.|++.|++|||+++ +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 995 7898888653 2346899999999999999999999853 8999999999999999999999999999865322
Q ss_pred ccccccCccccccccccccccC----CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 930 ETHATTDVAGTFGYVAPEYATT----CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 930 ~~~~~~~~~g~~~y~aPE~~~~----~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
.......++..|+|||.+.+ ..++.++|+||+|+++|||++|+.||...... .+.......... .
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~-~- 226 (283)
T cd06617 158 --VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-------FQQLKQVVEEPS-P- 226 (283)
T ss_pred --cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-------HHHHHHHHhcCC-C-
Confidence 11222457889999998865 44678999999999999999999998632211 111112211111 1
Q ss_pred cccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1006 LFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1006 ~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+. ....+..+.+++.+||..+|++||++.++++
T Consensus 227 ----~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 227 ----QLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ----CCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111 0123445889999999999999999999986
No 318
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.98 E-value=2e-31 Score=295.01 Aligned_cols=257 Identities=27% Similarity=0.325 Sum_probs=198.8
Q ss_pred CcccceeeecCceEEEEEEec-CCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecC--CeEEEEEe
Q 001562 777 FSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE--AEMFLVYN 851 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 851 (1052)
|++.+.||+|+||.||+|... +++.+|+|++.... ......+.+|++++++++|+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 677899999999999999765 48999999997653 33346788999999999999999999999987 88999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|++ ++|.+++.... ..+++..+..++.|+++|++|||+. +++|+||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred ccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 996 58998887653 4689999999999999999999999 999999999999999999999999999987654432
Q ss_pred ccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCC-c------
Q 001562 932 HATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGR-S------ 1003 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~------ 1003 (1052)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ........... .
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL--------EQLEKIFELCGSPTDENWP 227 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHHHhCCCchhhcc
Confidence 22333456788999998765 45788999999999999999999998743321 11111111000 0
Q ss_pred -------------cccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1004 -------------SELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1004 -------------~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.......+.......+...+.+++.+|++.+|++||++.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 228 GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000000001112556899999999999999999999976
No 319
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.98 E-value=6.8e-32 Score=293.68 Aligned_cols=247 Identities=28% Similarity=0.358 Sum_probs=202.7
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
+|++.+.||.|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|||++++++++.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4888999999999999999765 58999999986543 2345788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|+++++|.+++... ..+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999765 4689999999999999999999999 99999999999999999999999999998664332
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
......++..|+|||.+.+..++.++|+||+|+++|+|++|+.||...... ...+....... ..
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~--~~------- 218 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT------IRDQIRAKQET--AD------- 218 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc------HHHHHHHHhcc--cc-------
Confidence 223345788999999999888999999999999999999999999754321 11111111111 11
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCH--HHHH
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSV--KQVL 1045 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~--~eil 1045 (1052)
...+...+..+.+++.+||+.||.+||++ +|++
T Consensus 219 -~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 219 -VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 11222334668899999999999999999 6654
No 320
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.98 E-value=2.8e-31 Score=294.85 Aligned_cols=260 Identities=25% Similarity=0.314 Sum_probs=196.8
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
++|++.+.||+|++|.||+|... +++.||+|++..... ...+.+.+|++++++++|||++++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46899999999999999999765 688999998865432 223567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECC-CCcEEEEeccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDE-ELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~-~~~~kl~Dfgla~~~~~~~ 930 (1052)
|++ +++.+++........++..+..++.||+.|++|||++ +|+||||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~- 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP- 156 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCC-
Confidence 995 6888888765545568888999999999999999999 9999999999999985 557999999999765432
Q ss_pred cccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc-
Q 001562 931 THATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL- 1008 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1008 (1052)
........+++.|+|||.+.+. .++.++||||+|+++|+|+||+.||...... .+..+.....+.......
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~ 229 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI-------DELFKIFRILGTPNEETWP 229 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHHHhCCCChhhcc
Confidence 1122234568899999988764 5788999999999999999999999643211 111111111010000000
Q ss_pred ------------chhh----cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1009 ------------PELW----EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1009 ------------~~l~----~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+... ....+.....+.+++.+|++.+|++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 230 GVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred ccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 0011223455889999999999999999999875
No 321
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.98 E-value=2.8e-31 Score=302.51 Aligned_cols=257 Identities=27% Similarity=0.355 Sum_probs=197.2
Q ss_pred hhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccC--chhhHHHHHHHHHHhccCCcCceeeEEEEEecC------
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIG--RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE------ 843 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 843 (1052)
..++|++.+.||+|+||.||+|.. .+++.||+|++... ......++.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 456899999999999999999965 46899999988643 223345677899999999999999999998643
Q ss_pred CeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccc
Q 001562 844 AEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLA 923 (1052)
Q Consensus 844 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla 923 (1052)
...|+||||+. ++|.+++... +++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 35799999994 6888887643 88999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCc
Q 001562 924 RLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRS 1003 (1052)
Q Consensus 924 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
+..... .......++..|+|||.+.+..++.++||||+||++|+|++|+.||...... ..|.+.....+..
T Consensus 166 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~ 236 (353)
T cd07850 166 RTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-------DQWNKIIEQLGTP 236 (353)
T ss_pred eeCCCC--CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHHhcCCC
Confidence 865432 2223345788999999999999999999999999999999999998643211 1111111000000
Q ss_pred c---------------------------ccccchhh----cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1004 S---------------------------ELFLPELW----EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1004 ~---------------------------~~~~~~l~----~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. ..+....+ ...+......+.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 237 SDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred CHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0 00000000 0001233556889999999999999999999985
No 322
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.98 E-value=2.4e-31 Score=294.86 Aligned_cols=260 Identities=20% Similarity=0.236 Sum_probs=186.2
Q ss_pred hhCCCcccceeeecCceEEEEEEecCC----eEEEEEEeccCchhh-----------HHHHHHHHHHhccCCcCceeeEE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELVPG----YLVAVKKLSIGRFQG-----------IQQFDAEIGTLGRIRHKNLVTLI 837 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~~~----~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l~ 837 (1052)
..++|++.++||+|+||.||+|...++ ..+|+|+........ ......+...+..+.|+++++++
T Consensus 10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~ 89 (294)
T PHA02882 10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY 89 (294)
T ss_pred CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence 346899999999999999999976543 456666543222111 01122344556677899999999
Q ss_pred EEEecCC----eEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC
Q 001562 838 GYYVGEA----EMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL 913 (1052)
Q Consensus 838 ~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~ 913 (1052)
+++.... ..++++|++ ..++.+.+... ...++..+..++.|++.|++|||+. +|+||||||+||+++.++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 90 GCGSFKRCRMYYRFILLEKL-VENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNN 163 (294)
T ss_pred EeeeEecCCceEEEEEEehh-ccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCC
Confidence 9866443 347788877 45777776543 2357888899999999999999999 999999999999999999
Q ss_pred cEEEEeccccccccccccc------cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCC
Q 001562 914 NAYLSDFGLARLLEVSETH------ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNG 987 (1052)
Q Consensus 914 ~~kl~Dfgla~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~ 987 (1052)
.++|+|||+|+.+...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~---- 239 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHN---- 239 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccc----
Confidence 9999999999866422211 112246899999999999999999999999999999999999999743221
Q ss_pred cchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 988 FNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
.......+.-....-... .. .....+..+.+++..|+..+|++||+++++++.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 240 GNLIHAAKCDFIKRLHEG----KI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred hHHHHHhHHHHHHHhhhh----hh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 111111110000000000 00 01122456889999999999999999999998763
No 323
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.98 E-value=3.2e-31 Score=288.16 Aligned_cols=249 Identities=27% Similarity=0.451 Sum_probs=206.0
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+|++.+.||+|+||.||+|... ++..||+|++..... .....+.+|++++++++|+|++++++.+......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4788899999999999999664 588999999876543 4556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 853 LSGGNLETFIHKKS--GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
+++++|.++++... +..+++..+..++.+++.|++|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999998753 46799999999999999999999999 99999999999999999999999999998664332
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
.......+++.|+|||...+..++.++||||+|+++|+|++|+.||.... ..+........ ...
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~--------~~~~~~~~~~~-~~~------ 221 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN--------LLELALKILKG-QYP------ 221 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc--------HHHHHHHHhcC-CCC------
Confidence 12233467889999999998889999999999999999999999986322 11222222211 111
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+......+.+++.+||..+|++||++.|+++
T Consensus 222 ---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 222 ---PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 112233456899999999999999999999875
No 324
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.98 E-value=2.4e-31 Score=293.88 Aligned_cols=258 Identities=21% Similarity=0.343 Sum_probs=198.4
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh-hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ-GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
+|++.+.||+|++|.||+|... +|+.||+|++...... ..+.+.+|++++++++|+|++++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4888999999999999999765 5899999998765332 3456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 854 SGGNLETFIHKKS-GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 854 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+ ++|.+++.... ...++++.+..++.|+++|++|||+. +++||||+|+||++++++.++++|||++....... .
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-~ 155 (284)
T cd07836 81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-N 155 (284)
T ss_pred C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc-c
Confidence 7 58999887643 24589999999999999999999999 99999999999999999999999999997553221 1
Q ss_pred cccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCC-c-------
Q 001562 933 ATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGR-S------- 1003 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~------- 1003 (1052)
......++..|++||.+.+. .++.++||||+|+++|||++|+.||...... +.......... .
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE--------DQLLKIFRIMGTPTESTWPG 227 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH--------HHHHHHHHHhCCCChhhHHH
Confidence 22234567899999988664 5688999999999999999999998743221 11111111000 0
Q ss_pred ---cccccchh-------hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1004 ---SELFLPEL-------WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1004 ---~~~~~~~l-------~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...+.... .....+..+..+.+++.+|++.||++||++.|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 228 ISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred HhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000000 00011223456889999999999999999999875
No 325
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.98 E-value=3.2e-31 Score=294.58 Aligned_cols=260 Identities=23% Similarity=0.310 Sum_probs=194.9
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh--hHHHHHHHHHHhccCC-cCceeeEEEEEecCCe-----
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIR-HKNLVTLIGYYVGEAE----- 845 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 845 (1052)
++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+|+.++++++ ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36889999999999999999764 6899999987654322 2356788999999995 6999999999886655
Q ss_pred EEEEEeecCCCCHHHHHhhcc---CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECC-CCcEEEEecc
Q 001562 846 MFLVYNFLSGGNLETFIHKKS---GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDE-ELNAYLSDFG 921 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~-~~~~kl~Dfg 921 (1052)
.|+||||+++ ++.+++.... ...+++..+..++.||++|++|||++ +|+||||+|+||+++. ++.++|+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999975 8999886543 24589999999999999999999999 9999999999999998 8899999999
Q ss_pred ccccccccccccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHh
Q 001562 922 LARLLEVSETHATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKE 1000 (1052)
Q Consensus 922 la~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
++....... .......+++.|+|||.+.+ ..++.++||||||+++|||++|..||..... ..+..+.....
T Consensus 157 ~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~-------~~~~~~~~~~~ 228 (295)
T cd07837 157 LGRAFSIPV-KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE-------LQQLLHIFKLL 228 (295)
T ss_pred cceecCCCc-cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH-------HHHHHHHHHHh
Confidence 998653221 11122356788999998865 4578899999999999999999999864221 11111111111
Q ss_pred CCccccccch----------------hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1001 GRSSELFLPE----------------LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1001 ~~~~~~~~~~----------------l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+.......+. ......+.....+.+++.+|+++||++||++.|++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 229 GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 1111000000 000001223456889999999999999999999875
No 326
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=1.1e-31 Score=317.60 Aligned_cols=262 Identities=21% Similarity=0.261 Sum_probs=188.8
Q ss_pred hCCCcccceeeecCceEEEEEEecC--CeEEEEE------------------EeccCchhhHHHHHHHHHHhccCCcCce
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP--GYLVAVK------------------KLSIGRFQGIQQFDAEIGTLGRIRHKNL 833 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~~E~~~l~~l~h~ni 833 (1052)
.++|++.+.||+|+||+||+|..+. +..+++| .+. .......++.+|++++++++||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCCc
Confidence 4689999999999999999986532 2222222 111 111234567899999999999999
Q ss_pred eeEEEEEecCCeEEEEEeecCCCCHHHHHhhcc---CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEC
Q 001562 834 VTLIGYYVGEAEMFLVYNFLSGGNLETFIHKKS---GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLD 910 (1052)
Q Consensus 834 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~ 910 (1052)
+++++++.+.+..|+|+|++ ++++.+++.... .......++..++.|++.||+|||++ +|+||||||+||+++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 99999999999999999998 568888875432 12234566778999999999999999 999999999999999
Q ss_pred CCCcEEEEeccccccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcch
Q 001562 911 EELNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNI 990 (1052)
Q Consensus 911 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~ 990 (1052)
.++.+||+|||+++.+............|+..|+|||++.+..++.++|||||||++|||++|+.++...... ...
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~----~~~ 377 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG----KPG 377 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC----CHH
Confidence 9999999999999876544333344567999999999999999999999999999999999988544321111 011
Q ss_pred HHHHHHHHHhCCcccccc----------------------chhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 991 VSWAKLLIKEGRSSELFL----------------------PELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~----------------------~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+..+.....+.....+. +.+... ......+.+++.+|++.||++|||+.|+++
T Consensus 378 ~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 378 KQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRN--LGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHh--cCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 111111110000000000 000000 011234678899999999999999999986
No 327
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.98 E-value=2.8e-32 Score=274.75 Aligned_cols=268 Identities=22% Similarity=0.306 Sum_probs=204.8
Q ss_pred CCCcccceeeecCceEEEEEEec---C--CeEEEEEEeccCchh--hHHHHHHHHHHhccCCcCceeeEEEEEec-CCeE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV---P--GYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIRHKNLVTLIGYYVG-EAEM 846 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~---~--~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 846 (1052)
..|+..+.||+|.||.||+|... + ...+|+|+++..... -....-+|+..++.++|||++.+..++.. +..+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 46899999999999999999332 2 237899998765322 13456789999999999999999999887 7899
Q ss_pred EEEEeecCCCCHHHHHhhcc---CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC----CcEEEEe
Q 001562 847 FLVYNFLSGGNLETFIHKKS---GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE----LNAYLSD 919 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~----~~~kl~D 919 (1052)
++++||.+. +|.+.++-++ ...++...+.+|..||+.|+.|||+. =|+|||+||.|||+..+ |.|||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeec
Confidence 999999964 8988886543 45688899999999999999999999 79999999999999888 8999999
Q ss_pred cccccccccccc--ccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCC--CcchHHHH
Q 001562 920 FGLARLLEVSET--HATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGN--GFNIVSWA 994 (1052)
Q Consensus 920 fgla~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~--~~~~~~~~ 994 (1052)
+|+++.+...-. .....++.|..|.|||.+.|. .|+++.|||+.|||+.||+|-++-|......... .....+..
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 999998864422 234557889999999999875 4788999999999999999999888654332211 23333434
Q ss_pred HHHHHhCCccccccchhhc--CC-------------C---H-------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 995 KLLIKEGRSSELFLPELWE--AG-------------P---Q-------ENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~--~~-------------~---~-------~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+...--|...+...|.+.. ++ + . .......+|+.+++.+||.+|.|+.+.++
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence 4444444444433333321 00 0 0 00112678999999999999999999875
No 328
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.98 E-value=2.8e-31 Score=298.21 Aligned_cols=267 Identities=22% Similarity=0.309 Sum_probs=197.1
Q ss_pred CCcccceeeecCceEEEEEEec---CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecC--CeEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV---PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE--AEMF 847 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 847 (1052)
+|++.+.||+|+||.||+|... .++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999764 47899999987633 33346678899999999999999999999988 7899
Q ss_pred EEEeecCCCCHHHHHhhcc---CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECC----CCcEEEEec
Q 001562 848 LVYNFLSGGNLETFIHKKS---GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDE----ELNAYLSDF 920 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~----~~~~kl~Df 920 (1052)
+||||++ +++.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 9999996 57777775432 23688999999999999999999999 9999999999999999 899999999
Q ss_pred ccccccccccc--ccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCc--chHHHHH
Q 001562 921 GLARLLEVSET--HATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGF--NIVSWAK 995 (1052)
Q Consensus 921 gla~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~--~~~~~~~ 995 (1052)
|++........ .......+++.|+|||.+.+. .++.++||||||+++|||++|++||........... ......+
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986643222 122334678899999988764 578899999999999999999999975443321000 0000000
Q ss_pred HHHHhCCc----------------------ccccc-chhhcCCCH--HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 996 LLIKEGRS----------------------SELFL-PELWEAGPQ--ENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 996 ~~~~~~~~----------------------~~~~~-~~l~~~~~~--~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
....-+.. ...+. ..+....+. .....+.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000000 00000 000000000 23346889999999999999999999975
No 329
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.98 E-value=6.3e-31 Score=286.01 Aligned_cols=250 Identities=31% Similarity=0.429 Sum_probs=206.0
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecC--CeEEEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE--AEMFLVY 850 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 850 (1052)
+|++.+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++.+++++|+|++++++++.+. ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4778899999999999999765 689999999876543 4467889999999999999999999999988 8899999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+++++|.+++.... .+++..+..++.|+++|++|||+. +++|+|++|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999998763 789999999999999999999998 99999999999999999999999999998765433
Q ss_pred cc-cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 931 TH-ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 931 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
.. ......++..|+|||.+.+...+.++||||+|+++|+|++|+.||.... ......... ...
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~---~~~------ 219 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-------NPMAALYKI---GSS------ 219 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------chHHHHHhc---ccc------
Confidence 21 1233567889999999998889999999999999999999999997432 111111111 110
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
......+...+..+.+++.+|++.+|++||++.|+++
T Consensus 220 ~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 220 GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 0111223334567999999999999999999999985
No 330
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=3.4e-31 Score=291.33 Aligned_cols=244 Identities=27% Similarity=0.327 Sum_probs=193.8
Q ss_pred eeecCceEEEEEEec-CCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCH
Q 001562 783 IGTGGFGSTYKAELV-PGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNL 858 (1052)
Q Consensus 783 Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 858 (1052)
||+|+||+||+|... +|+.||+|.+.... ......+..|++++++++|||++++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999654 58899999886432 22244567899999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccCcc
Q 001562 859 ETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTDVA 938 (1052)
Q Consensus 859 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 938 (1052)
.+++.......+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++|+|||.+..... ........
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKG--GKKIKGRA 155 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhcc--CCcccccc
Confidence 9999876555789999999999999999999999 999999999999999999999999999876542 22223345
Q ss_pred ccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHH
Q 001562 939 GTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQE 1018 (1052)
Q Consensus 939 g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1018 (1052)
++..|+|||.+.+..++.++||||+|+++|+|++|+.||....... ..... ....... . ...+..
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~-----~~~~~~~--~----~~~~~~ 220 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV----EKEEL-----KRRTLEM--A----VEYPDK 220 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc----cHHHH-----Hhccccc--c----ccCCcc
Confidence 7789999999988889999999999999999999999997432210 01111 1110000 0 111222
Q ss_pred HHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001562 1019 NLLGMMRLASTCTVETLSTRP-----SVKQVLI 1046 (1052)
Q Consensus 1019 ~~~~l~~Li~~cl~~dP~~RP-----s~~eil~ 1046 (1052)
....+.+++.+||+.+|++|| ++.++++
T Consensus 221 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 221 FSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 345588999999999999999 6666654
No 331
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=8.4e-31 Score=294.01 Aligned_cols=246 Identities=29% Similarity=0.389 Sum_probs=196.6
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
.|+..+.||+|+||.||+|... ++..||+|++..... +...++..|++++++++|||++++++++.++...++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3777889999999999999754 688999998864322 234578889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|++ |++.+++.... ..+++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||++.....
T Consensus 106 ~~~-g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~--- 177 (317)
T cd06635 106 YCL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASP--- 177 (317)
T ss_pred CCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCC---
Confidence 996 58888776543 5689999999999999999999999 999999999999999999999999999875432
Q ss_pred ccccCcccccccccccccc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 932 HATTDVAGTFGYVAPEYAT---TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~---~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.....+++.|+|||.+. +..++.++|||||||++|||++|+.||.... ...............
T Consensus 178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~--------~~~~~~~~~~~~~~~---- 243 (317)
T cd06635 178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNESPT---- 243 (317)
T ss_pred --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHHhccCCC----
Confidence 22345788999999974 4567889999999999999999999986421 111112222211111
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKL 1048 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L 1048 (1052)
..+......+.+++.+|++.+|.+||++.++++..
T Consensus 244 -----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 244 -----LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred -----CCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 11123345689999999999999999999998754
No 332
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=5.1e-31 Score=295.75 Aligned_cols=257 Identities=19% Similarity=0.260 Sum_probs=194.5
Q ss_pred CcccceeeecCceEEEEEEecCCeEEEEEEeccC--chhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecC
Q 001562 777 FSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIG--RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
+.+.+.+|.|+++.||++.. +++.||+|++... .....+.+..|++++++++|+||+++++++.++...+++|||++
T Consensus 4 ~~i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~ 82 (314)
T cd08216 4 TLIGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMA 82 (314)
T ss_pred hhhhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccC
Confidence 34445556666666666644 5899999998754 33456788999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc---
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET--- 931 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~--- 931 (1052)
+++|.+++.......+++..+..++.|+++|++|||++ +|+||||||+||+++.++.++|+|||.+........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 83 YGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 99999999876556789999999999999999999999 999999999999999999999999998875532211
Q ss_pred ---ccccCccccccccccccccCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccc-
Q 001562 932 ---HATTDVAGTFGYVAPEYATTC--RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE- 1005 (1052)
Q Consensus 932 ---~~~~~~~g~~~y~aPE~~~~~--~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1005 (1052)
.......++..|+|||++.+. .++.++||||+||++|||++|+.||...... ....+. ... ....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~-------~~~~~~-~~~-~~~~~ 230 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT-------QMLLEK-VRG-TVPCL 230 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHH-Hhc-cCccc
Confidence 111223467789999998763 5788999999999999999999999742211 000010 000 0000
Q ss_pred -------------------cccch----hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1006 -------------------LFLPE----LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1006 -------------------~~~~~----l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..++. ............+.+++.+||+.||++|||++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 231 LDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 00000 001112333456889999999999999999999986
No 333
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-34 Score=330.78 Aligned_cols=455 Identities=25% Similarity=0.330 Sum_probs=365.2
Q ss_pred cccccchhhhCCCCCCeeEecCCCceecCCCCccCCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCcc
Q 001562 111 ISGTLSASIAKLTELRTLSVPHNSFSGEIPAGVGELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRG 190 (1052)
Q Consensus 111 l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 190 (1052)
..+..|..+..+.+|+.|+++.|-|. .+|.+.+++.+|++|+|..|.+. ..|..+..+.+|++||+|+|++. .+|.-
T Consensus 56 ~~~~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~ 132 (1081)
T KOG0618|consen 56 QISSFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLV 132 (1081)
T ss_pred ccccCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchh
Confidence 56677888999999999999999999 89999999999999999999999 89999999999999999999998 89999
Q ss_pred ccCCCCCcEEEccCCcccCccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCC
Q 001562 191 LIGNGELSVIDMSSNRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISEL 270 (1052)
Q Consensus 191 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 270 (1052)
+..++.+..+..++|.... .++.. .++.++|..|.+.+.++..+..+.. .|+|.+|.+. -..+.++.+|
T Consensus 133 i~~lt~~~~~~~s~N~~~~-----~lg~~-~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l 201 (1081)
T KOG0618|consen 133 IEVLTAEEELAASNNEKIQ-----RLGQT-SIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANL 201 (1081)
T ss_pred HHhhhHHHHHhhhcchhhh-----hhccc-cchhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccch
Confidence 9999999999999993221 12222 2889999999999999888887777 7999999987 3456788999
Q ss_pred CEEEccCCCCCCCCCcccccCCCCCeeecccCcccccCCCCCCccccccCCCchhhhcccCCcEeecCCCCCcccCCccc
Q 001562 271 KVLDVSRNSLTDRIPVELADCSKLSVLVLTNIDASLDLDNSRGEFSAFDGGVPYELLLSRSLEVLWAPRANLGGRLPDNW 350 (1052)
Q Consensus 271 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~l~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~ 350 (1052)
++|....|++.... -..++|+.|+.++|.++... .-. ...+|+.++++.|++++. |+++
T Consensus 202 ~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~----------~~p------~p~nl~~~dis~n~l~~l-p~wi 260 (1081)
T KOG0618|consen 202 EVLHCERNQLSELE----ISGPSLTALYADHNPLTTLD----------VHP------VPLNLQYLDISHNNLSNL-PEWI 260 (1081)
T ss_pred hhhhhhhcccceEE----ecCcchheeeeccCcceeec----------ccc------ccccceeeecchhhhhcc-hHHH
Confidence 99999999998521 34567889999888876211 112 236899999999999875 4999
Q ss_pred cCCCCccEEeCCCCcccccCCccccccCCCCEEeCCCCcCccCCCCCCCCCccceEecccCccccCCCCCccccccccCC
Q 001562 351 SESCSLKVLNLGQNSLKGAVPKSLGMCRNLTYLDLSLNNLEGYLPMQLPVPCMVYFNVSQNNITGVLPRFENVSCDNHFG 430 (1052)
Q Consensus 351 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~ 430 (1052)
+.+.+|+.++..+|+|+ .+|..+..+.+|+.|+..+|.+.-.+|..-++.+|++|+|..|+|...++.+...
T Consensus 261 ~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v------- 332 (1081)
T KOG0618|consen 261 GACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAV------- 332 (1081)
T ss_pred HhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhh-------
Confidence 99999999999999997 8999999999999999999999976666667999999999999997554422100
Q ss_pred ccccccccccccCcccccceeeeeeccCCccccccCcccccccccccccchhHHhhccCCcccCCCCCccccccCCCcce
Q 001562 431 FQDLQYANVPVMGSISDENFVIIHDFSGNKFLGSLPLFAIGDGFLAAKYKPHYRLLLNNNMFNGSVPGERISKCNDLQSF 510 (1052)
Q Consensus 431 ~~~l~~~~~~~~~~~~~~~~l~~l~ls~n~~~g~~p~~~~~~~~~~~~~~~~~~l~l~~n~~~~~~p~~~~~~~~~l~~~ 510 (1052)
. ...+..+..|-|++. ..|.+ .-.....|+
T Consensus 333 -~---------------~~~l~~ln~s~n~l~-~lp~~-------------------------------~e~~~~~Lq-- 362 (1081)
T KOG0618|consen 333 -L---------------NASLNTLNVSSNKLS-TLPSY-------------------------------EENNHAALQ-- 362 (1081)
T ss_pred -h---------------hHHHHHHhhhhcccc-ccccc-------------------------------cchhhHHHH--
Confidence 0 001222333333332 11100 000111222
Q ss_pred EEecCcccccccchHHHHhcCCCceEEEccCcccccccccccCCCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCC
Q 001562 511 SVNLSANLLSGMSYEAFLLDCVQLVEFEAANNQISGSIAAGVGKLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGN 590 (1052)
Q Consensus 511 ~l~l~~n~l~~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 590 (1052)
.|.+.+|.+++--.+.+ .+...|+.|+|++|+|...+...+.++..|++|+|++|+++ .+|+.+.+++.|+.|...+|
T Consensus 363 ~LylanN~Ltd~c~p~l-~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN 440 (1081)
T KOG0618|consen 363 ELYLANNHLTDSCFPVL-VNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSN 440 (1081)
T ss_pred HHHHhcCcccccchhhh-ccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCC
Confidence 36789999988766665 57899999999999999888889999999999999999999 88999999999999999999
Q ss_pred ccCCcCchhhcCCcCCcEEEcCCCCCCCC-CcchhcccccccceeccCCcCCCCCCcccccccccCeEecccCc
Q 001562 591 NLTGEIPSQFGHLISLVVLDLSHNALTGS-IPASLTKATKLESLFLAHNRLSGEIPVSFSTLVNLSALDLSFNN 663 (1052)
Q Consensus 591 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 663 (1052)
++. ..| ++..+++|+.+|+|.|+|+.. +|..... ++|++|||++|.-...--..|..+.++..+++.-|+
T Consensus 441 ~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~~ 511 (1081)
T KOG0618|consen 441 QLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLNN 511 (1081)
T ss_pred cee-ech-hhhhcCcceEEecccchhhhhhhhhhCCC-cccceeeccCCcccccchhhhHHhhhhhheecccCC
Confidence 999 788 899999999999999999843 3333322 799999999998443555677778888888887773
No 334
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=4.5e-31 Score=295.30 Aligned_cols=259 Identities=27% Similarity=0.364 Sum_probs=196.1
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhh--HHHHHHHHHHhccCCcCceeeEEEEEecC--CeEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQG--IQQFDAEIGTLGRIRHKNLVTLIGYYVGE--AEMFL 848 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 848 (1052)
.++|++.+.||+|+||.||+|... +|+.||+|+++...... ...+.+|+.++++++|+|++++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 457999999999999999999664 58999999986543221 23566899999999999999999998754 56899
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
||||+. ++|.+++.... ..+++.++..++.|+++|++|||+. +++||||+|+||++++++.+||+|||.+.....
T Consensus 86 v~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 999995 58999887653 5689999999999999999999999 999999999999999999999999999987653
Q ss_pred cccccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHh-CCcccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKE-GRSSEL 1006 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 1006 (1052)
.. .......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||..... .+........ +.....
T Consensus 161 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~--------~~~~~~~~~~~~~~~~~ 231 (309)
T cd07845 161 PA-KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE--------IEQLDLIIQLLGTPNES 231 (309)
T ss_pred cc-CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHhcCCCChh
Confidence 32 12222345778999999876 4578899999999999999999999963221 1111111110 000000
Q ss_pred ccch-----------hh-------cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1007 FLPE-----------LW-------EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1007 ~~~~-----------l~-------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+. +. ..........+.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 232 IWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000 00 0000112455789999999999999999999875
No 335
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=1.8e-31 Score=301.05 Aligned_cols=259 Identities=20% Similarity=0.289 Sum_probs=192.8
Q ss_pred ceeeec--CceEEEEEEe-cCCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTG--GFGSTYKAEL-VPGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G--~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
..||+| +||+||+|.. .+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 9999999976 468999999986543 23356788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc---
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH--- 932 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~--- 932 (1052)
+++.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+.........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 9999999876555689999999999999999999999 9999999999999999999999999865433211100
Q ss_pred ---cccCccccccccccccccCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHH------------
Q 001562 933 ---ATTDVAGTFGYVAPEYATTC--RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAK------------ 995 (1052)
Q Consensus 933 ---~~~~~~g~~~y~aPE~~~~~--~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~------------ 995 (1052)
......++..|+|||++.+. .++.++||||+||++|||++|+.||....... ...+...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ----MLLQKLKGPPYSPLDITTF 236 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH----HHHHHhcCCCCCCcccccc
Confidence 01112345679999999763 46889999999999999999999997432110 0000000
Q ss_pred ----H----------------HHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 996 ----L----------------LIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 996 ----~----------------~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. ....+......+..+....+..+...+.+++++||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 237 PCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred chhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0 00000000000111111123345677999999999999999999999975
No 336
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=5e-31 Score=287.56 Aligned_cols=242 Identities=23% Similarity=0.303 Sum_probs=196.7
Q ss_pred eeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCH
Q 001562 783 IGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNL 858 (1052)
Q Consensus 783 Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 858 (1052)
||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999765 488999999865432 2346788999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccCcc
Q 001562 859 ETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTDVA 938 (1052)
Q Consensus 859 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 938 (1052)
.+++... ..+++..+..++.|+++|++|||++ +++|+||+|+||+++.++.++|+|||.+....... ......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~ 153 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFC 153 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccccc
Confidence 9999765 3589999999999999999999998 99999999999999999999999999998664332 223346
Q ss_pred ccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHH
Q 001562 939 GTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQE 1018 (1052)
Q Consensus 939 g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1018 (1052)
++..|++||.+.+..++.++|+||+|+++|||++|..||..... +..+..+....... . ...+..
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~-~--------~~~~~~ 218 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE------DPMEIYNDILKGNG-K--------LEFPNY 218 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC------CHHHHHHHHhccCC-C--------CCCCcc
Confidence 78899999999888899999999999999999999999975432 11222222221111 1 111222
Q ss_pred HHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 001562 1019 NLLGMMRLASTCTVETLSTRPS-----VKQVLI 1046 (1052)
Q Consensus 1019 ~~~~l~~Li~~cl~~dP~~RPs-----~~eil~ 1046 (1052)
....+.+++.+||+.+|++||+ ++|+++
T Consensus 219 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 219 IDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 3456999999999999999999 777765
No 337
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=5.9e-32 Score=317.12 Aligned_cols=252 Identities=28% Similarity=0.399 Sum_probs=191.8
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEec---------
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVG--------- 842 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 842 (1052)
..+|+..++||+||||.||+++.+ +|+.||||++.... ......+.+|+.++.+++|||||+++..+.+
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 356888899999999999999765 79999999997653 3345678899999999999999998852210
Q ss_pred --------------------------------------------------------------------------------
Q 001562 843 -------------------------------------------------------------------------------- 842 (1052)
Q Consensus 843 -------------------------------------------------------------------------------- 842 (1052)
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence
Q ss_pred ----------------------C--------CeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhc
Q 001562 843 ----------------------E--------AEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYS 892 (1052)
Q Consensus 843 ----------------------~--------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~ 892 (1052)
+ ...|+=||||+...++++++..... -.....++++.+|++|++|+|++
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEGLaYIH~~ 716 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEGLAYIHDQ 716 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHHHhC
Confidence 0 1147889999988888888765411 14678899999999999999999
Q ss_pred CCCCeeecCCCCCCEEECCCCcEEEEecccccccc----c-------------cccccccCccccccccccccccCCC--
Q 001562 893 CVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE----V-------------SETHATTDVAGTFGYVAPEYATTCR-- 953 (1052)
Q Consensus 893 ~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~----~-------------~~~~~~~~~~g~~~y~aPE~~~~~~-- 953 (1052)
|||||||||.||+++++..|||+|||+|.... . ......+..+||.-|+|||++.+..
T Consensus 717 ---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 717 ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred ---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 99999999999999999999999999998721 0 0111334568999999999997654
Q ss_pred -CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHccc
Q 001562 954 -VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTV 1032 (1052)
Q Consensus 954 -~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~ 1032 (1052)
|+.|+||||+|++++||+ .||.. .+........+. .+.... ++.+ .......-.++|.+|++
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~---yPF~T-------sMERa~iL~~LR-~g~iP~--~~~f----~~~~~~~e~slI~~Ll~ 856 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEML---YPFGT-------SMERASILTNLR-KGSIPE--PADF----FDPEHPEEASLIRWLLS 856 (1351)
T ss_pred cccchhhhHHHHHHHHHHh---ccCCc-------hHHHHHHHHhcc-cCCCCC--Cccc----ccccchHHHHHHHHHhc
Confidence 899999999999999998 35653 233333333332 222221 1222 22233445789999999
Q ss_pred CCCCCCCCHHHHHH
Q 001562 1033 ETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1033 ~dP~~RPs~~eil~ 1046 (1052)
.||.+||||.|++.
T Consensus 857 hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 857 HDPSKRPTATELLN 870 (1351)
T ss_pred CCCccCCCHHHHhh
Confidence 99999999999985
No 338
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=2.7e-31 Score=300.63 Aligned_cols=262 Identities=23% Similarity=0.346 Sum_probs=194.7
Q ss_pred hCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc-hhhHHHHHHHHHHhccCCcCceeeEEEEEecC-----CeE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR-FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE-----AEM 846 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 846 (1052)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+.++++++|||++++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46899999999999999999965 468999999986432 23346678899999999999999999987643 357
Q ss_pred EEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccc
Q 001562 847 FLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLL 926 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~ 926 (1052)
++|+||++ +++.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++|+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeec
Confidence 99999995 588887754 3589999999999999999999999 9999999999999999999999999999865
Q ss_pred cccccc--cccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCc
Q 001562 927 EVSETH--ATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRS 1003 (1052)
Q Consensus 927 ~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
...... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... ...............
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~-----~~~~~~~~~~~~~~~ 231 (336)
T cd07849 157 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL-----HQLNLILGVLGTPSQ 231 (336)
T ss_pred cccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHcCCCCH
Confidence 432211 1223467889999998754 56788999999999999999999999632110 000000000000000
Q ss_pred -----------c---c--cccchh-hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1004 -----------S---E--LFLPEL-WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1004 -----------~---~--~~~~~l-~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
. . ...+.. +....+.....+.+++.+||+.+|++||++.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0 000000 000001224458899999999999999999999864
No 339
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=5.4e-31 Score=286.16 Aligned_cols=247 Identities=23% Similarity=0.379 Sum_probs=203.3
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+|++.+.||+|+||.||+|... +++.+|+|.+.... ......+.+|++++++++|+||+++++++.+....++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4788899999999999999654 67899999986543 23356778899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 853 LSGGNLETFIHKKS--GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
+++++|.+++.... ...++++.+..++.|+++|++|||+. +++||||+|.||++++++.+|++|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 99999999987632 35689999999999999999999999 9999999999999999999999999999876533
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
......+++.|++||...+..++.++|+||+|+++|||++|+.||..... .+.... ...+...
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~-~~~~~~~------ 219 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM--------QDLRYK-VQRGKYP------ 219 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHH-HhcCCCC------
Confidence 22234578899999999998899999999999999999999999964321 111111 1111111
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+.....++.+++.+|++.+|++||++.|+++
T Consensus 220 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 220 ---PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ---CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 122344566999999999999999999999975
No 340
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=5.3e-31 Score=290.94 Aligned_cols=257 Identities=26% Similarity=0.350 Sum_probs=199.9
Q ss_pred CcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh--hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 777 FSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
|++.+.||+|++|.||+|... +++.+++|++...... ....+..|++++++++|+|++++++++.++...++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999664 6889999998655433 3567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
+ +++.+++.... ..+++..+..++.|+++|++|||+. +|+|+||+|+||++++++.++|+|||.+....... ..
T Consensus 81 ~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~ 154 (283)
T cd05118 81 D-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RP 154 (283)
T ss_pred C-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-cc
Confidence 6 58988887754 5789999999999999999999999 99999999999999999999999999998665432 12
Q ss_pred ccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 934 TTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
.....++..|+|||.+.+. .++.++||||+|+++|+|++|+.||..... ..+..+.....+.......+...
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 227 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE-------IDQLFKIFRTLGTPDPEVWPKFT 227 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHHHcCCCchHhcccch
Confidence 2334577889999998876 788999999999999999999999863221 11111111111110000000000
Q ss_pred ------------------cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1013 ------------------EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1013 ------------------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..........+.+++.+||+.||.+||++.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 228 SLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0111234567899999999999999999999975
No 341
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=5.7e-31 Score=291.41 Aligned_cols=244 Identities=24% Similarity=0.388 Sum_probs=197.3
Q ss_pred cceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCH
Q 001562 780 RNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNL 858 (1052)
Q Consensus 780 ~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 858 (1052)
..+||+|+||.||+|.. .+++.||+|++..........+.+|+.+++.++|+|++++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 46799999999999966 46899999998765555567789999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccCcc
Q 001562 859 ETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTDVA 938 (1052)
Q Consensus 859 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 938 (1052)
.+++... .+++..+..++.|++.|++|||+. |++||||+|+||++++++.++|+|||++....... .......
T Consensus 105 ~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~~~ 177 (292)
T cd06657 105 TDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLV 177 (292)
T ss_pred HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccccc
Confidence 9988543 478999999999999999999999 99999999999999999999999999987554221 2223346
Q ss_pred ccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHH
Q 001562 939 GTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQE 1018 (1052)
Q Consensus 939 g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1018 (1052)
+++.|+|||.+.+..++.++|+||+|+++|||++|+.||..... .+..... ...... .+. ....
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--------~~~~~~~-~~~~~~-----~~~--~~~~ 241 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--------LKAMKMI-RDNLPP-----KLK--NLHK 241 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHH-HhhCCc-----ccC--Cccc
Confidence 78899999999888889999999999999999999999863211 1111111 111110 100 0112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1019 NLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1019 ~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+..+.+++.+|++.+|.+||++.++++
T Consensus 242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred CCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 3345889999999999999999999886
No 342
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=5.5e-31 Score=293.74 Aligned_cols=263 Identities=27% Similarity=0.343 Sum_probs=198.4
Q ss_pred HhhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCC----
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA---- 844 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 844 (1052)
...++|++.+.||+|+||.||+|... +++.||+|+++.... .....+.+|++++++++|||++++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45578999999999999999999775 588999999865432 23356778999999999999999999987654
Q ss_pred ------eEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEE
Q 001562 845 ------EMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLS 918 (1052)
Q Consensus 845 ------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~ 918 (1052)
..++|+||+++ ++.+++... ...++++.+..++.|++.|++|||+. +|+||||+|+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeC
Confidence 78999999965 787877654 24689999999999999999999999 99999999999999999999999
Q ss_pred eccccccccccccccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH
Q 001562 919 DFGLARLLEVSETHATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLL 997 (1052)
Q Consensus 919 Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
|||.+...............++..|+|||.+.+ ..++.++||||+||++|||++|++||..... ....+.....
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-----~~~~~~~~~~ 233 (302)
T cd07864 159 DFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-----LAQLELISRL 233 (302)
T ss_pred cccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHH
Confidence 999998665333222233356778999998865 3568899999999999999999999873211 1111111111
Q ss_pred HHhCCccccccchh------------------hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 998 IKEGRSSELFLPEL------------------WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 998 ~~~~~~~~~~~~~l------------------~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. +.......+.+ ........+..+.+++.+||+.+|++||++.++++
T Consensus 234 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 234 C--GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred h--CCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1 00000000000 00001122456899999999999999999999875
No 343
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=4.2e-31 Score=292.49 Aligned_cols=254 Identities=25% Similarity=0.348 Sum_probs=201.0
Q ss_pred CCcccceeeecCceEEEEEEec----CCeEEEEEEeccCc----hhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV----PGYLVAVKKLSIGR----FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEM 846 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 846 (1052)
+|++.+.||+|+||.||+|... +++.||||.++... ....+.+..|+++++++ +||+++++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3788899999999999999642 46889999886432 22345678899999999 599999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccc
Q 001562 847 FLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLL 926 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~ 926 (1052)
++||||+++++|.+++... ..+++..+..++.|+++|++|||+. +++||||+|+||+++.++.++|+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 9999999999999998764 4688999999999999999999998 9999999999999999999999999998866
Q ss_pred cccccccccCccccccccccccccCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcc
Q 001562 927 EVSETHATTDVAGTFGYVAPEYATTCR--VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSS 1004 (1052)
Q Consensus 927 ~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
............++..|+|||...+.. .+.++||||+|+++|||++|..||...... ....+..+......
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~----~~~~~~~~~~~~~~--- 228 (288)
T cd05583 156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ----NSQSEISRRILKSK--- 228 (288)
T ss_pred ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc----chHHHHHHHHHccC---
Confidence 443333333446788999999987765 678999999999999999999998632111 11122222222111
Q ss_pred ccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 1005 ELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 1005 ~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
+ ..+......+.+++.+||+.+|++|||+.++.+.++
T Consensus 229 ----~----~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 229 ----P----PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred ----C----CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 1 112223445889999999999999999888877664
No 344
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=9.9e-31 Score=283.70 Aligned_cols=247 Identities=27% Similarity=0.470 Sum_probs=203.3
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+|++.+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++|+|++++++++.++...++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4788899999999999999654 578999999876654 4557889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+++++|.+++... ..+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 9999999999765 4689999999999999999999999 9999999999999999999999999999876543321
Q ss_pred cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhh
Q 001562 933 ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELW 1012 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1012 (1052)
.....++..|+|||...+..++.++|||++|+++|+|++|+.||.... ......+ ... . ... .
T Consensus 156 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~-------~~~~~~~-~~~-~-~~~----~-- 218 (254)
T cd06627 156 -DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN-------PMAALFR-IVQ-D-DHP----P-- 218 (254)
T ss_pred -ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc-------HHHHHHH-Hhc-c-CCC----C--
Confidence 233457889999999988888899999999999999999999986321 1111111 111 1 111 1
Q ss_pred cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1013 EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1013 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+...+..+.+++.+|+..+|++||++.|++.
T Consensus 219 --~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 219 --LPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred --CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 12223456889999999999999999999875
No 345
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=9.4e-31 Score=288.79 Aligned_cols=257 Identities=23% Similarity=0.271 Sum_probs=192.7
Q ss_pred CcccceeeecCceEEEEEEe-cCCeEEEEEEeccCch-hhHHHHHHHHHHhccCC-cCceeeEEEEEecC--CeEEEEEe
Q 001562 777 FSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIR-HKNLVTLIGYYVGE--AEMFLVYN 851 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 851 (1052)
|++.+.||+|+||.||+|.. .+++.||+|+++.... ........|+.+++++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 67788999999999999965 4688999998865422 22234457888898885 99999999999987 88999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|++ +++.+++.... ..+++.++..++.|++.|++|||+. +|+||||+|+||+++. +.+||+|||++........
T Consensus 81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 81 LMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred cCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 996 68888887643 4689999999999999999999999 9999999999999999 9999999999986643222
Q ss_pred ccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH-----------HH
Q 001562 932 HATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLL-----------IK 999 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-----------~~ 999 (1052)
.....++..|+|||.+.. ..++.++||||+||++|||++|+.||...... +...+.... ..
T Consensus 155 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07831 155 --YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL-----DQIAKIHDVLGTPDAEVLKKFR 227 (282)
T ss_pred --cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH-----HHHHHHHHHcCCCCHHHHHhhc
Confidence 123457889999997654 55688999999999999999999999643211 111111110 00
Q ss_pred hCCccccccchhh----cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1000 EGRSSELFLPELW----EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1000 ~~~~~~~~~~~l~----~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.........+... .......+..+.+++.+|++++|++||++.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 228 KSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000000000000 0001234567999999999999999999999975
No 346
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=1.2e-30 Score=288.71 Aligned_cols=256 Identities=25% Similarity=0.332 Sum_probs=195.6
Q ss_pred CcccceeeecCceEEEEEEecC-CeEEEEEEeccCchh--hHHHHHHHHHHhccC---CcCceeeEEEEEecCCe-----
Q 001562 777 FSIRNLIGTGGFGSTYKAELVP-GYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRI---RHKNLVTLIGYYVGEAE----- 845 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 845 (1052)
|++.+.||+|+||.||+|..+. ++.||+|++...... ....+.+|+.+++++ .|+|++++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6778999999999999998764 899999998754322 134556677776665 59999999999987766
Q ss_pred EEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccc
Q 001562 846 MFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARL 925 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~ 925 (1052)
.+++|||++ ++|.+++.......+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.++|+|||.+..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCccee
Confidence 899999996 5899998876545689999999999999999999999 999999999999999999999999999986
Q ss_pred ccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcc-
Q 001562 926 LEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSS- 1004 (1052)
Q Consensus 926 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1004 (1052)
...... .....++..|+|||.+.+..++.++||||||+++|||++|++||...... +............
T Consensus 157 ~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 226 (287)
T cd07838 157 YSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA--------DQLDKIFDVIGLPS 226 (287)
T ss_pred ccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH--------HHHHHHHHHcCCCC
Confidence 643221 12234678999999999988999999999999999999999888743211 1112121110000
Q ss_pred ------cc-----ccchhh----cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1005 ------EL-----FLPELW----EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1005 ------~~-----~~~~l~----~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.. ..+... ....+.....+.+++.+||+.||++||++.|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 227 EEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00 000000 0111233466789999999999999999999875
No 347
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=1.3e-30 Score=284.87 Aligned_cols=245 Identities=21% Similarity=0.294 Sum_probs=190.0
Q ss_pred HhhCCCccccee--eecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEE
Q 001562 772 RATGNFSIRNLI--GTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 772 ~~~~~~~~~~~L--g~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 847 (1052)
...++|++.+.+ |+|+||.||++.. .++..+|+|.+........ |+.....+ +|||++++++++...+..+
T Consensus 11 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 11 QFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 344567777766 9999999999965 4578899998865432211 22222222 6999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC-cEEEEeccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL-NAYLSDFGLARLL 926 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~-~~kl~Dfgla~~~ 926 (1052)
+||||+++++|.+++... ..++++++..++.|+++|+.|||+. +++||||+|+||+++.++ .++|+|||.+...
T Consensus 86 iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~ 160 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKII 160 (267)
T ss_pred EEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceec
Confidence 999999999999999765 3789999999999999999999999 999999999999999998 9999999998755
Q ss_pred cccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 927 EVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 927 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
... ....++..|+|||++.+..++.++||||+|+++|||++|+.||...... ......+.... ....
T Consensus 161 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~---~~~~-- 227 (267)
T PHA03390 161 GTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE---ELDLESLLKRQ---QKKL-- 227 (267)
T ss_pred CCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc---hhhHHHHHHhh---cccC--
Confidence 422 2235788999999999989999999999999999999999999743222 11122222111 1000
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPS-VKQVLI 1046 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs-~~eil~ 1046 (1052)
. .+......+.+++.+|++.+|.+||+ ++|+++
T Consensus 228 ---~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 228 ---P----FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ---C----cccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 1 11133455899999999999999996 588874
No 348
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.5e-33 Score=327.03 Aligned_cols=252 Identities=30% Similarity=0.421 Sum_probs=204.8
Q ss_pred hCCCcccceeeecCceEEEEE-EecCCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
+-+|+....||.|.||.||.| ...+|+-.|+|.+..... .....+.+|..++..++|||+|+++|+-.+.+.+++.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 346778889999999999999 455799999998765433 33566788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
|||++|+|.+.++.. ...++.....+..|++.|++|||+. |||||||||.||+++.+|.+|.+|||.|..+....
T Consensus 1314 EyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 999999999999765 3466777778889999999999999 99999999999999999999999999999886442
Q ss_pred ---cccccCccccccccccccccCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcc
Q 001562 931 ---THATTDVAGTFGYVAPEYATTC---RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSS 1004 (1052)
Q Consensus 931 ---~~~~~~~~g~~~y~aPE~~~~~---~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
........||+.|||||++.+. ....++||||+||++.||+||++||.....+ |+-. ..-+-.+
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne---------~aIM-y~V~~gh 1458 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE---------WAIM-YHVAAGH 1458 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch---------hHHH-hHHhccC
Confidence 1233456899999999999763 3556899999999999999999999743332 3221 1222222
Q ss_pred ccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1005 ELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1005 ~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
. ++.|.....+-.+++.+|+..||++|.++.|+++.
T Consensus 1459 ~-------Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1459 K-------PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred C-------CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 1 23345566667899999999999999999888753
No 349
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=6.4e-31 Score=289.16 Aligned_cols=242 Identities=25% Similarity=0.333 Sum_probs=186.6
Q ss_pred eeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhc---cCCcCceeeEEEEEecCCeEEEEEeecC
Q 001562 782 LIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLG---RIRHKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 782 ~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~---~l~h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
+||+|+||.||+|... +++.||+|.+..... .....+.+|..+++ ..+||+++.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999664 588999998864322 11223344444333 3479999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT 934 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 934 (1052)
+++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.++++|||++....... .
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---~ 152 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---P 152 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---c
Confidence 99999998765 4689999999999999999999999 99999999999999999999999999987553221 2
Q ss_pred cCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhc
Q 001562 935 TDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWE 1013 (1052)
Q Consensus 935 ~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1013 (1052)
....|+..|+|||.+.+ ..++.++||||+||++|||++|..||...... . .......... ....
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~-~~~~~~~~~~------~~~~--- 217 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-----D-KHEIDRMTLT------VNVE--- 217 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc-----C-HHHHHHHhhc------CCcC---
Confidence 23468899999999864 56789999999999999999999999743221 1 1111111100 0111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 001562 1014 AGPQENLLGMMRLASTCTVETLSTRP-----SVKQVLIK 1047 (1052)
Q Consensus 1014 ~~~~~~~~~l~~Li~~cl~~dP~~RP-----s~~eil~~ 1047 (1052)
.+...+..+.+++.+|++.||++|| +++|+++.
T Consensus 218 -~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 218 -LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred -CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 1223345688999999999999999 59988763
No 350
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=4.2e-31 Score=288.57 Aligned_cols=244 Identities=26% Similarity=0.402 Sum_probs=195.6
Q ss_pred eeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCH
Q 001562 783 IGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNL 858 (1052)
Q Consensus 783 Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 858 (1052)
||+|+||.||+|... +|+.+|+|++..... ...+.+.+|++++++++|||++++++++......|+++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999776 489999999865433 3456788999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc-------
Q 001562 859 ETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET------- 931 (1052)
Q Consensus 859 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~------- 931 (1052)
.+++.... .+++..+..++.|+++|++|||+. +++||||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99998753 689999999999999999999999 999999999999999999999999999875533211
Q ss_pred ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchh
Q 001562 932 HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPEL 1011 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1011 (1052)
.......++..|+|||...+...+.++||||||+++||+++|+.||..... .+....... +.... +.
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~-~~~~~---~~- 222 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP--------EEIFQNILN-GKIEW---PE- 222 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhc-CCcCC---Cc-
Confidence 122334577899999999888889999999999999999999999974321 122222211 11110 00
Q ss_pred hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001562 1012 WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKL 1048 (1052)
Q Consensus 1012 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L 1048 (1052)
....+..+.+++.+||+.+|++|||+.++.+.+
T Consensus 223 ----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 223 ----DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred ----cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 001245688999999999999999995554444
No 351
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=7.5e-32 Score=301.52 Aligned_cols=265 Identities=26% Similarity=0.347 Sum_probs=202.2
Q ss_pred CCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccC-chhhHHHHHHHHHHhccCCcCceeeEEEEEecC------CeE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIG-RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE------AEM 846 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 846 (1052)
.-|...+.||+|+||.||+|+. .+|+.||||.+... .....++..+|++++++++|+|||+++++=++. ...
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 3466778999999999999984 57999999988653 334567788999999999999999999986543 356
Q ss_pred EEEEeecCCCCHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEC--CCCc--EEEEecc
Q 001562 847 FLVYNFLSGGNLETFIHKKS-GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLD--EELN--AYLSDFG 921 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~--~~~~--~kl~Dfg 921 (1052)
.+|||||.+|||+..++... ...+++.++..+..+++.||.|||+. ||+||||||.||++- ++|. .||+|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 89999999999999998654 45799999999999999999999999 999999999999983 3333 6999999
Q ss_pred ccccccccccccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHh
Q 001562 922 LARLLEVSETHATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKE 1000 (1052)
Q Consensus 922 la~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1052)
.|+.+..+ ......+||..|.+||.... +.|+..+|.|||||++||++||..||.+...+... .+.+......
T Consensus 170 ~Arel~d~--s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~----~~~~~~~~tk 243 (732)
T KOG4250|consen 170 AARELDDN--SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNN----KEIMWHIITK 243 (732)
T ss_pred ccccCCCC--CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcccc----chhhhhhhcc
Confidence 99977533 35667899999999999985 78888999999999999999999999876555322 2222222222
Q ss_pred CCcc--ccccch-----hhcC-------CCHHHHHHHHHHHHHcccCCCCCCC--CHHHHHHHH
Q 001562 1001 GRSS--ELFLPE-----LWEA-------GPQENLLGMMRLASTCTVETLSTRP--SVKQVLIKL 1048 (1052)
Q Consensus 1001 ~~~~--~~~~~~-----l~~~-------~~~~~~~~l~~Li~~cl~~dP~~RP--s~~eil~~L 1048 (1052)
.... ....++ -|+. ........+.+.+..++..+|++|- ...+....+
T Consensus 244 kp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~ 307 (732)
T KOG4250|consen 244 KPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEV 307 (732)
T ss_pred CCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHH
Confidence 1111 111111 1111 1134445577788888899999998 555444443
No 352
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=265.04 Aligned_cols=250 Identities=24% Similarity=0.429 Sum_probs=198.1
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccC-chhhHHHHHHHHHHhccCC-cCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIG-RFQGIQQFDAEIGTLGRIR-HKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+.+...-||.|.-|.||+++++ +|..+|||.+... ..++.+++...++++.+-+ +|+||+.+|+|..+..+++.||.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 3455677999999999999776 4899999998654 4455677788888776664 89999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
| ....+..+++.. +++++..+-++...+++||.||.+++ +|+|||+||+|||+|+.|.+|+||||.+..+- +..
T Consensus 173 M-s~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlv--dSk 246 (391)
T KOG0983|consen 173 M-STCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLV--DSK 246 (391)
T ss_pred H-HHHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceee--ccc
Confidence 8 456666666554 67899889999999999999999996 99999999999999999999999999998664 334
Q ss_pred cccCccccccccccccccC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 933 ATTDVAGTFGYVAPEYATT---CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~---~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......|-+.|||||.+.- ..|..++||||||+.++|+.||..||.....++ +....+..+ .. ..+..
T Consensus 247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF-------e~ltkvln~-eP-P~L~~ 317 (391)
T KOG0983|consen 247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF-------EVLTKVLNE-EP-PLLPG 317 (391)
T ss_pred ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH-------HHHHHHHhc-CC-CCCCc
Confidence 4445578899999999864 457889999999999999999999998644331 222222221 11 21211
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. ......+++++..|+..|+.+||...++++
T Consensus 318 ~------~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 318 H------MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred c------cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 1 113455999999999999999999998875
No 353
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=1.6e-30 Score=283.84 Aligned_cols=249 Identities=24% Similarity=0.359 Sum_probs=197.2
Q ss_pred CCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccC-----chhhHHHHHHHHHHhccCCcCceeeEEEEEecC--CeE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIG-----RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE--AEM 846 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 846 (1052)
.+|++.+.||+|+||.||+|.. .++..||+|.+... .......+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4689999999999999999965 45899999987532 123346788999999999999999999998754 468
Q ss_pred EEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccc
Q 001562 847 FLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLL 926 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~ 926 (1052)
++++||+++++|.+++... ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 8999999999999999764 3578999999999999999999999 9999999999999999999999999999865
Q ss_pred cccc--cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcc
Q 001562 927 EVSE--THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSS 1004 (1052)
Q Consensus 927 ~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
.... ........++..|+|||.+.+..++.++|+|||||++||+++|+.||..... .+.......... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~-~ 227 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA--------MAAIFKIATQPT-K 227 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH--------HHHHHHHHcCCC-C
Confidence 3211 1111234578899999999988899999999999999999999999863211 111111111110 0
Q ss_pred ccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1005 ELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1005 ~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+ ..+......+.+++.+|+. +|.+||++.+++.
T Consensus 228 ----~----~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 228 ----P----MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ----C----CCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 1 1233444568999999999 5799999998865
No 354
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1e-30 Score=289.75 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=198.0
Q ss_pred CCcccceeeecCceEEEEEEe----cCCeEEEEEEeccCch----hhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeE
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL----VPGYLVAVKKLSIGRF----QGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEM 846 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 846 (1052)
+|++.+.||+|+||.||+|.. .+|+.||+|++..... ...+.+..|+++++++ +|++|+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 478889999999999999965 3688999999865322 2246678899999999 599999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccc
Q 001562 847 FLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLL 926 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~ 926 (1052)
++|+||+++++|.+++... ..+++..+..++.|+++|+.|||+. +++||||+|+||++++++.++|+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 9999999999999999765 4688999999999999999999999 9999999999999999999999999999865
Q ss_pred cccccccccCccccccccccccccCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcc
Q 001562 927 EVSETHATTDVAGTFGYVAPEYATTC--RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSS 1004 (1052)
Q Consensus 927 ~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
............++..|+|||.+.+. .++.++||||||+++|+|++|+.||..... .....++.+.......
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~----~~~~~~~~~~~~~~~~-- 229 (290)
T cd05613 156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE----KNSQAEISRRILKSEP-- 229 (290)
T ss_pred ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc----cccHHHHHHHhhccCC--
Confidence 43332333345688899999998753 467889999999999999999999863211 1122222222222111
Q ss_pred ccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001562 1005 ELFLPELWEAGPQENLLGMMRLASTCTVETLSTRP-----SVKQVLI 1046 (1052)
Q Consensus 1005 ~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RP-----s~~eil~ 1046 (1052)
..+......+.+++.+|++.||++|| ++.++..
T Consensus 230 ---------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 230 ---------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ---------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 11222344588999999999999997 6666654
No 355
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=1.1e-30 Score=284.44 Aligned_cols=242 Identities=22% Similarity=0.298 Sum_probs=187.7
Q ss_pred ceeeecCceEEEEEEec-CCeEEEEEEeccCchh---hHHHHHHHHHHh-ccCCcCceeeEEEEEecCCeEEEEEeecCC
Q 001562 781 NLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ---GIQQFDAEIGTL-GRIRHKNLVTLIGYYVGEAEMFLVYNFLSG 855 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 855 (1052)
+.||+|+||.||+|... +++.||+|.+...... ....+..|..++ ...+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56899999999999654 5889999998654321 223344454444 445899999999999999999999999999
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
++|.+++... ..+++..+..++.|+++|+.|||+. +++||||+|+||++++++.++|+|||++..... ..
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~ 151 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NK 151 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-----cc
Confidence 9999999765 4688999999999999999999999 999999999999999999999999999875432 22
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
...++..|+|||.+.+..++.++||||+|+++|||++|..||..... .+...... .+... ..+..
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~-~~~~~--~~~~~---- 216 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP--------DAVFDNIL-SRRIN--WPEEV---- 216 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHH-hcccC--CCCcc----
Confidence 34578899999999888889999999999999999999999964321 12122111 11111 01111
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1016 PQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1016 ~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
....+..+.+++.+||+.+|++||++.++.+.
T Consensus 217 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 217 KEFCSPEAVDLINRLLCMDPAKRLGANGYQEI 248 (260)
T ss_pred cccCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence 12234568999999999999999977544443
No 356
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=1.2e-30 Score=289.84 Aligned_cols=253 Identities=25% Similarity=0.413 Sum_probs=195.2
Q ss_pred hCCCcccceeeecCceEEEEEEecC-CeEEEEEEeccCch-hhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP-GYLVAVKKLSIGRF-QGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
.++|++.+.||+|+||.||+|.... ++.||||++..... .....+..|+..+.+. .||||+++++++.++...++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3568899999999999999998764 89999999875432 2345566677766666 4999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+ .+++.++..... ..+++..+..++.|++.|++|||+.. +|+||||+|+||++++++.++|+|||++..+....
T Consensus 94 e~~-~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 94 ELM-STCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred ecc-CcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 998 457887776643 47899999999999999999999732 89999999999999999999999999987654222
Q ss_pred cccccCccccccccccccccCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccc
Q 001562 931 THATTDVAGTFGYVAPEYATTCR----VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSEL 1006 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~----~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1006 (1052)
. .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... .+............
T Consensus 170 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~-- 238 (296)
T cd06618 170 A--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-------FEVLTKILQEEPPS-- 238 (296)
T ss_pred c--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-------HHHHHHHhcCCCCC--
Confidence 1 12235778999999987654 788999999999999999999998632111 12222222221110
Q ss_pred ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1007 FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1007 ~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
.. .....+.++.+++.+||+.||++||++.++++.
T Consensus 239 ----~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 239 ----LP--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred ----CC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 011234568999999999999999999999764
No 357
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=9.8e-31 Score=292.95 Aligned_cols=262 Identities=24% Similarity=0.322 Sum_probs=194.4
Q ss_pred hhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh--hHHHHHHHHHHhccCCcCceeeEEEEEecCC-----
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA----- 844 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 844 (1052)
..++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+|++++++++|||++++++++....
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 3457999999999999999999664 5899999988654322 2345678999999999999999999987543
Q ss_pred ---eEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecc
Q 001562 845 ---EMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFG 921 (1052)
Q Consensus 845 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfg 921 (1052)
..++||||+. +++.+++.... ..+++.++..++.|+++|++|||+. +++|+||+|+||+++.++.+||+|||
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCC
Confidence 4599999995 58888886643 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccccccc---cccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH
Q 001562 922 LARLLEVSETH---ATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLL 997 (1052)
Q Consensus 922 la~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
++......... ......++..|+|||.+.+. .++.++||||+|+++|||++|+.||...... .........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~-----~~~~~~~~~ 239 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ-----HQLTLISQL 239 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHH
Confidence 99866432211 12234567889999988664 3688999999999999999999998643221 111111111
Q ss_pred HHhCCccccccchh-----------hcCC---------CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 998 IKEGRSSELFLPEL-----------WEAG---------PQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 998 ~~~~~~~~~~~~~l-----------~~~~---------~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.. .....+.+.. .... +......+.+++.+|++.||++|||++|+++
T Consensus 240 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 240 CG--SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hC--CCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 10 0000000000 0000 0011234678999999999999999999975
No 358
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.1e-32 Score=272.80 Aligned_cols=242 Identities=24% Similarity=0.335 Sum_probs=199.5
Q ss_pred hhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc---hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR---FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 848 (1052)
..++|+..++||+|.||.|..++- .+++.+|+|++++.. ..+.+.-..|-++++..+||.+..+--.|+..+..|+
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 446799999999999999999954 468999999987643 3345556789999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
||||..||.|.-++.+. ..++++...-+-..|+.|+.|||++ +||.||+|.+|.|+|.+|.+||+|||+++.- -
T Consensus 246 VMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~-I 319 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEE-I 319 (516)
T ss_pred EEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhc-c
Confidence 99999999999888775 4789999999999999999999999 9999999999999999999999999999742 2
Q ss_pred cccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.........+|||.|+|||++....|..+.|.|.+||++|||++|+.||+.-..+ .+.+. ....+-+
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~-----kLFeL--Il~ed~k------ 386 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE-----KLFEL--ILMEDLK------ 386 (516)
T ss_pred cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh-----HHHHH--HHhhhcc------
Confidence 2344556789999999999999999999999999999999999999999843222 11111 1111111
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCC
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRP 1039 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RP 1039 (1052)
.|.....+...|+...+..||.+|.
T Consensus 387 ------FPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 387 ------FPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred ------CCccCCHHHHHHHHHHhhcChHhhc
Confidence 1223334477899999999999997
No 359
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=6.7e-31 Score=297.36 Aligned_cols=263 Identities=21% Similarity=0.256 Sum_probs=196.4
Q ss_pred hCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccC--chhhHHHHHHHHHHhccCCcCceeeEEEEEecC-----Ce
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIG--RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE-----AE 845 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 845 (1052)
..+|++.+.||+|+||.||+|.. .+++.||+|++... ......++.+|+.+++.++|+|++++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 35799999999999999999965 46899999988643 223345677899999999999999999987643 34
Q ss_pred EEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccc
Q 001562 846 MFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARL 925 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~ 925 (1052)
.++|+||+ +++|.+++... ..+++..+..++.|++.|+.|||++ +++||||||+||+++.++.+||+|||++..
T Consensus 84 ~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELM-DTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCC-CCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 79999999 47899988754 4689999999999999999999999 999999999999999999999999999986
Q ss_pred ccccccccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCC----------------CCc
Q 001562 926 LEVSETHATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYG----------------NGF 988 (1052)
Q Consensus 926 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~----------------~~~ 988 (1052)
..... .......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||........ ...
T Consensus 158 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 158 TSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred cCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 64322 22233457889999998865 4688899999999999999999999964211000 000
Q ss_pred chHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 989 NIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
....+.+. .... .....+... ...+.....+.+++.+|++.+|++||+++|+++.
T Consensus 237 ~~~~~~~~-~~~~--~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 237 RNEKARRY-IRSL--PYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred CchhhhHH-HHhc--CcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00000000 0000 000000000 0012234568899999999999999999999864
No 360
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=1.2e-30 Score=295.45 Aligned_cols=260 Identities=27% Similarity=0.352 Sum_probs=196.3
Q ss_pred hhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccC--chhhHHHHHHHHHHhccC-CcCceeeEEEEEecC--CeE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIG--RFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGE--AEM 846 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~ 846 (1052)
..++|++.+.||+|+||.||+|... +++.+|+|++... .......+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3467999999999999999999764 5889999988542 223345677899999999 999999999998643 368
Q ss_pred EEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccc
Q 001562 847 FLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLL 926 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~ 926 (1052)
++||||++ ++|.+++... .+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.+||+|||++...
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 99999996 6999988654 578899999999999999999999 9999999999999999999999999999866
Q ss_pred ccccc----ccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhC
Q 001562 927 EVSET----HATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEG 1001 (1052)
Q Consensus 927 ~~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1052)
..... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... ...+.....+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-------~~~~~~~~~~ 230 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-------QLEKIIEVIG 230 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-------HHHHHHHHhC
Confidence 43221 12233467889999998765 457889999999999999999999986432110 0000000000
Q ss_pred Cccc-------------ccc-------chhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1002 RSSE-------------LFL-------PELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1002 ~~~~-------------~~~-------~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
.... .+. .... ......+..+.+++.+||+.||++|||+.++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 231 PPSAEDIESIKSPFAATMLDSLPSRPRKPLD-ELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred CCCHHHHHHHHhhhHHHhhhhcccccccchh-hhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000 000 0000 0011134568999999999999999999999864
No 361
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=7.5e-31 Score=289.21 Aligned_cols=248 Identities=24% Similarity=0.388 Sum_probs=202.4
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccC---chhhHHHHHHHHHHhccCC-cCceeeEEEEEecCCeEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIG---RFQGIQQFDAEIGTLGRIR-HKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 849 (1052)
++|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++ ||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36889999999999999999664 6899999988643 2233467888999999998 99999999999999999999
Q ss_pred EeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccc
Q 001562 850 YNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVS 929 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~ 929 (1052)
|||+++++|.+++... ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 9999999999999875 3699999999999999999999999 9999999999999999999999999999866432
Q ss_pred cc-------------------ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcch
Q 001562 930 ET-------------------HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNI 990 (1052)
Q Consensus 930 ~~-------------------~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~ 990 (1052)
.. .......++..|+|||...+..++.++||||+|+++|++++|+.||.... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~ 227 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN--------E 227 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc--------H
Confidence 21 12223457889999999998889999999999999999999999987432 1
Q ss_pred HHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCH----HHHHH
Q 001562 991 VSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSV----KQVLI 1046 (1052)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~----~eil~ 1046 (1052)
....+....... ..+...+..+.+++.+||+.+|++||++ .|+++
T Consensus 228 ~~~~~~~~~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 228 YLTFQKILKLEY-----------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHHHHHhcCC-----------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 111122211110 1122334558999999999999999999 77764
No 362
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=4.1e-30 Score=287.77 Aligned_cols=243 Identities=30% Similarity=0.383 Sum_probs=193.4
Q ss_pred CcccceeeecCceEEEEEEe-cCCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 777 FSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
|...+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+++++.++|||++++++++.++...++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 56667899999999999965 4588999999864332 2345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
+. +++.+++.... ..+++.++..++.|++.|++|||+. +|+||||+|+||++++++.++|+|||++....
T Consensus 103 ~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~----- 172 (313)
T cd06633 103 CL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSS----- 172 (313)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccC-----
Confidence 95 68888886643 5689999999999999999999999 99999999999999999999999999986432
Q ss_pred cccCcccccccccccccc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 933 ATTDVAGTFGYVAPEYAT---TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~---~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
......++..|+|||.+. ...++.++||||||+++|||++|..||..... ........... ....
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~--------~~~~~~~~~~~-~~~~--- 240 (313)
T cd06633 173 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------MSALYHIAQND-SPTL--- 240 (313)
T ss_pred CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHhcC-CCCC---
Confidence 122346788999999984 45678899999999999999999999864311 11122221111 1110
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
........+.+++.+|++.+|.+||++.++++
T Consensus 241 -----~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 241 -----QSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred -----CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01122345889999999999999999999885
No 363
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=2.2e-30 Score=289.31 Aligned_cols=245 Identities=29% Similarity=0.381 Sum_probs=194.8
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccC---chhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIG---RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
.|+..+.||+|+||.||+|... +++.+|+|.+... ......++.+|+++++.++|+|++++++++.+....++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 4777788999999999999754 5788999988642 22334567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|+. |++.+++.... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 96 ~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-- 168 (308)
T cd06634 96 YCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 168 (308)
T ss_pred ccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc--
Confidence 995 68888776543 4689999999999999999999999 9999999999999999999999999998755422
Q ss_pred ccccCcccccccccccccc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 932 HATTDVAGTFGYVAPEYAT---TCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~---~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
....+++.|+|||.+. ...++.++|||||||++|||++|+.||..... .+....... +...
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------~~~~~~~~~-~~~~---- 232 (308)
T cd06634 169 ---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------MSALYHIAQ-NESP---- 232 (308)
T ss_pred ---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH--------HHHHHHHhh-cCCC----
Confidence 2345788999999974 35578899999999999999999999863211 111111111 1111
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
. ..+......+.+++.+||+.+|++||++.++++.
T Consensus 233 -~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 233 -A---LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred -C---cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 0 0112344568899999999999999999999864
No 364
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=8.7e-31 Score=296.19 Aligned_cols=264 Identities=22% Similarity=0.315 Sum_probs=196.5
Q ss_pred hCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEec----CCeE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVG----EAEM 846 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 846 (1052)
..+|++.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 36799999999999999999965 4689999999865422 234667789999999999999999998763 3468
Q ss_pred EEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccc
Q 001562 847 FLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLL 926 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~ 926 (1052)
++|+||+. ++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999994 6899998654 4589999999999999999999999 9999999999999999999999999999765
Q ss_pred ccccc---ccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCC----------CCcchH-
Q 001562 927 EVSET---HATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYG----------NGFNIV- 991 (1052)
Q Consensus 927 ~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~----------~~~~~~- 991 (1052)
..... .......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||........ ......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence 43221 11223468889999999865 4578899999999999999999999964321100 000000
Q ss_pred ----HHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 992 ----SWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 992 ----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.............. +..+....+..+..+.+++.+|++.+|++||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQ---PVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhchhhHHHHHhhcccCC---CCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00000000000000 00000011223556999999999999999999999876
No 365
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=1.1e-30 Score=295.04 Aligned_cols=258 Identities=24% Similarity=0.325 Sum_probs=200.9
Q ss_pred CCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCC-----eEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA-----EMF 847 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 847 (1052)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++|+||+++++++.... ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999765 48999999887543 334567889999999999999999999988765 789
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+||||++ ++|.+++... ..+++..+..++.|+++|++|||+. ||+||||||.||+++.++.++|+|||.+....
T Consensus 81 lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999996 5899988754 3789999999999999999999999 99999999999999999999999999998765
Q ss_pred cccc--ccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCC-c
Q 001562 928 VSET--HATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGR-S 1003 (1052)
Q Consensus 928 ~~~~--~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 1003 (1052)
.... .......++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||...... +..+....... .
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~~~ 226 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI--------DQLNLIVEVLGTP 226 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH--------HHHHHHHHhcCCC
Confidence 4321 123344678899999999887 7889999999999999999999999643211 11111111000 0
Q ss_pred ccc-------------------ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1004 SEL-------------------FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1004 ~~~-------------------~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
... ..+.-+.......+..+.+++.+||+.+|++||++.++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 227 SEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred ChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000 00000000112234568899999999999999999999873
No 366
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=3e-30 Score=292.82 Aligned_cols=261 Identities=24% Similarity=0.348 Sum_probs=196.4
Q ss_pred hhHHHhhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecC-
Q 001562 768 DNVVRATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE- 843 (1052)
Q Consensus 768 ~~~~~~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~- 843 (1052)
..+....++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 44566778999999999999999999954 568999999986532 22345678899999999999999999988643
Q ss_pred -----CeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEE
Q 001562 844 -----AEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLS 918 (1052)
Q Consensus 844 -----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~ 918 (1052)
...+++++++ +++|.+++... .+++..+..++.|+++|++|||+. +|+||||||+||++++++.+||+
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~ 162 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 162 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEe
Confidence 3468888887 88999888643 589999999999999999999999 99999999999999999999999
Q ss_pred eccccccccccccccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH
Q 001562 919 DFGLARLLEVSETHATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLL 997 (1052)
Q Consensus 919 Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
|||++..... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... ....+..
T Consensus 163 dfg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-------~~~~~~~ 231 (345)
T cd07877 163 DFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-------DQLKLIL 231 (345)
T ss_pred cccccccccc----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHH
Confidence 9999875432 2233467889999998876 46788999999999999999999998532211 0000000
Q ss_pred HHhCCccccccchh-------------------hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 998 IKEGRSSELFLPEL-------------------WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 998 ~~~~~~~~~~~~~l-------------------~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...+.....+.+.+ ...........+.+++.+|++.||++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 232 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred HHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 00010000000000 00000012345789999999999999999999875
No 367
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=1.4e-30 Score=287.59 Aligned_cols=264 Identities=26% Similarity=0.336 Sum_probs=196.9
Q ss_pred CcccceeeecCceEEEEEEec-CCeEEEEEEeccCch-hhHHHHHHHHHHhccCC-cCceeeEEEEEecCCeEEEEEeec
Q 001562 777 FSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIR-HKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
|++.+.||+|++|+||+|... +++.||+|++..... .......+|+..+++++ |+|++++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 677899999999999999775 478899998865432 22234567899999998 999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
+|+|.+++.......+++..+..++.|+++++.|||++ +++|+||+|+||++++++.++|+|||.+........
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 154 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-- 154 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCC--
Confidence 88999999876555789999999999999999999999 999999999999999999999999999986543221
Q ss_pred ccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCC--------CcchHHHHHHHHHhCCcc
Q 001562 934 TTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGN--------GFNIVSWAKLLIKEGRSS 1004 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 1004 (1052)
.....++..|+|||.+.+ ..++.++|+||||+++|||++|+.||......... ......|...........
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 223457889999998754 45788999999999999999999998643211000 000001111111111100
Q ss_pred ccccchh---hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1005 ELFLPEL---WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1005 ~~~~~~l---~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+.... .....+.....+.+++.+||+.+|++||+++|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000000 00001112456899999999999999999999975
No 368
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=1.1e-30 Score=296.03 Aligned_cols=258 Identities=19% Similarity=0.293 Sum_probs=193.7
Q ss_pred hCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecC---------
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE--------- 843 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 843 (1052)
..+|++.+.||.|+||.||+|.. .+++.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 36899999999999999999965 46889999998776666667888999999999999999999876543
Q ss_pred -----CeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEC-CCCcEEE
Q 001562 844 -----AEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLD-EELNAYL 917 (1052)
Q Consensus 844 -----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~-~~~~~kl 917 (1052)
...++|+||++ ++|.+++.. ..+++..+..++.|+++|+.|||+. +|+||||||+||+++ +++.+++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEE
Confidence 35789999996 689888864 3588999999999999999999999 999999999999997 4567899
Q ss_pred Eeccccccccccccc--cccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHH
Q 001562 918 SDFGLARLLEVSETH--ATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWA 994 (1052)
Q Consensus 918 ~Dfgla~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 994 (1052)
+|||.+......... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||....+. +..
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~--------~~~ 228 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL--------EQM 228 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHH
Confidence 999999865432211 1122357889999998654 55788999999999999999999999743211 001
Q ss_pred HHHHHhCCcc-------------cccc-----c-hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 995 KLLIKEGRSS-------------ELFL-----P-ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 995 ~~~~~~~~~~-------------~~~~-----~-~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.......... .... + .......+....++.+++.+|++.||++||++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 229 QLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 1000000000 0000 0 0000001122345889999999999999999999974
No 369
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=268.70 Aligned_cols=252 Identities=23% Similarity=0.306 Sum_probs=198.7
Q ss_pred hCCCccc-ceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEEEec----CCeE
Q 001562 774 TGNFSIR-NLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVG----EAEM 846 (1052)
Q Consensus 774 ~~~~~~~-~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~~ 846 (1052)
+++|++. ++||-|-.|.|..+.+ ++++++|+|++... ....+|++.--.. .|||||.++++|+. ...+
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 4456554 5799999999999954 46899999987532 3446677765444 69999999999864 4567
Q ss_pred EEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECC---CCcEEEEecccc
Q 001562 847 FLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDE---ELNAYLSDFGLA 923 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~---~~~~kl~Dfgla 923 (1052)
.+|||.|+||.|.+.++.+..+.+++.++..|++||+.|+.|||+. +|.|||+||+|+|.+. +..+|++|||+|
T Consensus 135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccc
Confidence 8999999999999999999888999999999999999999999999 9999999999999964 456899999999
Q ss_pred ccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCc
Q 001562 924 RLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRS 1003 (1052)
Q Consensus 924 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
+.... ........-||.|.|||++...+|+...|+||+||++|-|++|.+||+..... .+.--++..++.+..
T Consensus 212 K~t~~--~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~-----aispgMk~rI~~gqy 284 (400)
T KOG0604|consen 212 KETQE--PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-----AISPGMKRRIRTGQY 284 (400)
T ss_pred cccCC--CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc-----cCChhHHhHhhccCc
Confidence 96543 23344556799999999999999999999999999999999999999843221 111223444444433
Q ss_pred cccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1004 SELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1004 ~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. |-..-| ....+...++|+.++..+|++|.|+.|+..
T Consensus 285 ~--FP~pEW----s~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 285 E--FPEPEW----SCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred c--CCChhH----hHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 2 111112 234556889999999999999999999864
No 370
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1e-31 Score=312.45 Aligned_cols=256 Identities=23% Similarity=0.306 Sum_probs=209.3
Q ss_pred hHHHhhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccC---chhhHHHHHHHHHHhccCCcCceeeEEEEEecCC
Q 001562 769 NVVRATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIG---RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA 844 (1052)
Q Consensus 769 ~~~~~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 844 (1052)
++....++|++.++||+|+||+|..++++ +++.||+|++.+. .......|.+|-.+|.--..+=|+.++-+|.+..
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 34445678999999999999999999775 5788999988652 2334578999999999999999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccc
Q 001562 845 EMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLAR 924 (1052)
Q Consensus 845 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~ 924 (1052)
..|+|||||+||+|-..+.+.. .+++.-+..++..|+-|+..+|+. |+|||||||+|||+|..|++|++|||.+.
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHH
Confidence 9999999999999999998874 799999999999999999999999 99999999999999999999999999998
Q ss_pred cccccccccccCccccccccccccccC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 001562 925 LLEVSETHATTDVAGTFGYVAPEYATT-----CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIK 999 (1052)
Q Consensus 925 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
.+.....-.....+|||.|.+||+++. +.|++.+|.||+||++|||+.|..||+. .++++-...+..
T Consensus 224 km~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa--------dslveTY~KIm~ 295 (1317)
T KOG0612|consen 224 KMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA--------DSLVETYGKIMN 295 (1317)
T ss_pred hcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH--------HHHHHHHHHHhc
Confidence 887666656667899999999999853 5688999999999999999999999983 233433333332
Q ss_pred hCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCC---HHHHH
Q 001562 1000 EGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPS---VKQVL 1045 (1052)
Q Consensus 1000 ~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs---~~eil 1045 (1052)
....... +...+.+....+||.+.++ +|+.|.. +.|+.
T Consensus 296 hk~~l~F-------P~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 296 HKESLSF-------PDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred hhhhcCC-------CcccccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 2111110 1123345568888888876 6777776 77664
No 371
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.8e-30 Score=290.98 Aligned_cols=260 Identities=25% Similarity=0.326 Sum_probs=193.1
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchh--hHHHHHHHHHHhccCCcCceeeEEEEEecC-------
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIRHKNLVTLIGYYVGE------- 843 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 843 (1052)
.++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+|++++++++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999764 5889999988654322 234667899999999999999999987543
Q ss_pred -CeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccc
Q 001562 844 -AEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGL 922 (1052)
Q Consensus 844 -~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgl 922 (1052)
...++|+||+. +++..++.... ..+++..+..++.|+++|++|||++ +|+||||||+||++++++.++|+|||+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCcc
Confidence 34699999995 57877776542 5699999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccc----------cccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchH
Q 001562 923 ARLLEVSETH----------ATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIV 991 (1052)
Q Consensus 923 a~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~ 991 (1052)
+......... ......+++.|+|||.+.+. .++.++||||+|+++|||++|++||......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-------- 233 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-------- 233 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH--------
Confidence 9865432211 11223567889999987654 5788999999999999999999998643221
Q ss_pred HHHHHHHHhCCc------------cccccchhhcCCC-------HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 992 SWAKLLIKEGRS------------SELFLPELWEAGP-------QENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 992 ~~~~~~~~~~~~------------~~~~~~~l~~~~~-------~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...+........ ............+ ......+.+++.+|++.||++|||+.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 234 DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 111111110000 0000000000000 112246889999999999999999999875
No 372
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=3.8e-30 Score=282.96 Aligned_cols=241 Identities=24% Similarity=0.328 Sum_probs=186.3
Q ss_pred eeeecCceEEEEEEe-cCCeEEEEEEeccCchh---hHHHHHHHH---HHhccCCcCceeeEEEEEecCCeEEEEEeecC
Q 001562 782 LIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQ---GIQQFDAEI---GTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 782 ~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~---~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
+||+|+||.||+|.. .+++.||+|.+...... ....+..|. +.++...||+++++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999965 45889999988654221 112233443 34444579999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT 934 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 934 (1052)
+++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++....... .
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---~ 152 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---P 152 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---C
Confidence 99999998754 4689999999999999999999999 99999999999999999999999999987553221 2
Q ss_pred cCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhc
Q 001562 935 TDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWE 1013 (1052)
Q Consensus 935 ~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1013 (1052)
....|+..|+|||.+.++ .++.++||||+|+++|||++|+.||....... ... ........ ...+
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~-----~~~-~~~~~~~~------~~~~-- 218 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHE-IDRMTLTM------AVEL-- 218 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc-----hHH-HHHHhhcc------CCCC--
Confidence 234688999999998754 57899999999999999999999997532210 111 11111110 1111
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 001562 1014 AGPQENLLGMMRLASTCTVETLSTRP-----SVKQVLI 1046 (1052)
Q Consensus 1014 ~~~~~~~~~l~~Li~~cl~~dP~~RP-----s~~eil~ 1046 (1052)
+......+.+++.+|+..+|++|| ++.|+++
T Consensus 219 --~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 219 --PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred --CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 122245688999999999999999 9999875
No 373
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=4.6e-30 Score=288.92 Aligned_cols=264 Identities=25% Similarity=0.362 Sum_probs=196.2
Q ss_pred HHhhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEec-CCeE
Q 001562 771 VRATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVG-EAEM 846 (1052)
Q Consensus 771 ~~~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 846 (1052)
....++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+..|++++++++|||++++++++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 34567899999999999999999964 478999999875432 2234677889999999999999999999875 5678
Q ss_pred EEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccc
Q 001562 847 FLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLL 926 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~ 926 (1052)
++|+||+ +++|.+++... .+++..+..++.|+++|++|||+. +|+||||+|+||++++++.++|+|||.+...
T Consensus 86 ~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~ 158 (328)
T cd07856 86 YFVTELL-GTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQ 158 (328)
T ss_pred EEEeehh-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence 9999998 67999888643 478888999999999999999999 9999999999999999999999999998754
Q ss_pred cccccccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCC-------CcchHHHHHHHH
Q 001562 927 EVSETHATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGN-------GFNIVSWAKLLI 998 (1052)
Q Consensus 927 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~-------~~~~~~~~~~~~ 998 (1052)
.. ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||......... +....++.+...
T Consensus 159 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (328)
T cd07856 159 DP----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTIC 234 (328)
T ss_pred CC----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 32 1223456789999998766 56889999999999999999999998643210000 000000110000
Q ss_pred HhCCccccccchhh--cCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 999 KEGRSSELFLPELW--EAGP-----QENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 999 ~~~~~~~~~~~~l~--~~~~-----~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
... ..+ +...+. ...+ +.....+.+++.+|++.+|++||++.+++..
T Consensus 235 ~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 235 SEN-TLR-FVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred chh-hHH-HHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 000 000000 0001 1234568999999999999999999998753
No 374
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=4.3e-30 Score=291.23 Aligned_cols=256 Identities=23% Similarity=0.347 Sum_probs=194.9
Q ss_pred HhhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCC----
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEA---- 844 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 844 (1052)
...++|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+|++++++++||||+++++++..+.
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 3466899999999999999999954 468999999885432 222456788999999999999999999987543
Q ss_pred --eEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccc
Q 001562 845 --EMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGL 922 (1052)
Q Consensus 845 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgl 922 (1052)
..++||||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++++|||+
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 468999999 7899988864 3589999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHh-
Q 001562 923 ARLLEVSETHATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKE- 1000 (1052)
Q Consensus 923 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 1000 (1052)
+...... .....+++.|+|||.+.+ ..++.++|+||+|+++|++++|+.||...... .........
T Consensus 165 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~--------~~~~~~~~~~ 232 (343)
T cd07880 165 ARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL--------DQLMEIMKVT 232 (343)
T ss_pred ccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHhc
Confidence 9865322 223456889999999876 45788999999999999999999999743211 111111110
Q ss_pred CCccccccch------------hh-------cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1001 GRSSELFLPE------------LW-------EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1001 ~~~~~~~~~~------------l~-------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
......+.+. +. ..........+.+++.+|++.||++|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 233 GTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred CCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000 00 0001122345889999999999999999999883
No 375
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=2.6e-30 Score=281.63 Aligned_cols=248 Identities=23% Similarity=0.360 Sum_probs=194.9
Q ss_pred CCcccceeeecCceEEEEEEecC-CeEEEEEEeccC-----chhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELVP-GYLVAVKKLSIG-----RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLV 849 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 849 (1052)
+|.+.+.||+|+||.||+|.... +..+++|..+.. ......++..|+.++++++|||++++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 58889999999999999996543 444555554321 122334567899999999999999999999998999999
Q ss_pred EeecCCCCHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 850 YNFLSGGNLETFIHKK--SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 850 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+||+++++|.+++... ....+++..+..++.|+++|+.|||+. +++|+||+|+||++++ +.++|+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999998752 245789999999999999999999999 9999999999999986 479999999987654
Q ss_pred ccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc
Q 001562 928 VSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF 1007 (1052)
Q Consensus 928 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
... .......+++.|+|||...+..++.++|+||+|+++|+|++|..||... ........... +...
T Consensus 157 ~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~--------~~~~~~~~~~~-~~~~--- 223 (260)
T cd08222 157 GSC-DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ--------NFLSVVLRIVE-GPTP--- 223 (260)
T ss_pred CCc-ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc--------cHHHHHHHHHc-CCCC---
Confidence 322 2223345788999999998888899999999999999999999998632 11222222211 1111
Q ss_pred cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1008 LPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1008 ~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+...+..+.+++.+|++.+|++||++.|+++
T Consensus 224 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 224 ------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 112344556899999999999999999999975
No 376
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=4.5e-30 Score=290.69 Aligned_cols=259 Identities=24% Similarity=0.315 Sum_probs=194.0
Q ss_pred CCCc-ccceeeecCceEEEEEEec-CCeEEEEEEeccCchhh--------------HHHHHHHHHHhccCCcCceeeEEE
Q 001562 775 GNFS-IRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQG--------------IQQFDAEIGTLGRIRHKNLVTLIG 838 (1052)
Q Consensus 775 ~~~~-~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~ 838 (1052)
++|. +.+.||+|+||+||+|... +++.||+|+++...... ...+.+|++++++++|+|++++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4565 4577999999999999654 68999999886543221 124678999999999999999999
Q ss_pred EEecCCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEE
Q 001562 839 YYVGEAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLS 918 (1052)
Q Consensus 839 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~ 918 (1052)
++...+..++||||+. |+|.+++... ..++++....++.|++.|++|||+. +|+||||+|+||+++.++.++|+
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEEC
Confidence 9999999999999995 6999998754 4689999999999999999999999 99999999999999999999999
Q ss_pred eccccccccccc-------------cccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccC
Q 001562 919 DFGLARLLEVSE-------------THATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEY 984 (1052)
Q Consensus 919 Dfgla~~~~~~~-------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~ 984 (1052)
|||++....... ........++..|+|||.+.+. .++.++||||+|+++|||++|+.||......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~- 240 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI- 240 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 999998654111 1111223467789999998764 4688999999999999999999998743221
Q ss_pred CCCcchHHHHHHHHHhCCcccc-------------cc---chhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 985 GNGFNIVSWAKLLIKEGRSSEL-------------FL---PELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~-------------~~---~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
......... -+..... +. +.............+.+++.+|++.+|++||+++|++.
T Consensus 241 ----~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 241 ----DQLGRIFEL--LGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred ----HHHHHHHHH--hCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 111101000 0000000 00 00000001122456889999999999999999999985
No 377
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=3.3e-30 Score=284.45 Aligned_cols=256 Identities=27% Similarity=0.363 Sum_probs=197.8
Q ss_pred CcccceeeecCceEEEEEEec-CCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 777 FSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
|+..+.||+|+||.||+|... +++.||+|++.... ....+.+..|++++++++|+|++++++++.+....++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999765 48999999987653 233467788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
+ ++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++|+|||.+........ .
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~ 154 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-T 154 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-c
Confidence 6 69999998763 4689999999999999999999999 999999999999999999999999999986543221 2
Q ss_pred ccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCC-c--------
Q 001562 934 TTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGR-S-------- 1003 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------- 1003 (1052)
.....++..|+|||.+.+. .++.++||||+|+++||+++|+.||...... +.......... .
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI--------DQLFKIFQILGTPTEESWPGV 226 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHHHhCCCcHHHHHhh
Confidence 2223456789999998776 7889999999999999999999988643211 11111110000 0
Q ss_pred ------ccc---ccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1004 ------SEL---FLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1004 ------~~~---~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
... ..........+.....+.+++.+|+..+|++||++.+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 227 TKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000 0000000001122456999999999999999999999875
No 378
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=5.1e-30 Score=290.68 Aligned_cols=254 Identities=22% Similarity=0.344 Sum_probs=191.4
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecC------C
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE------A 844 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 844 (1052)
..+|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 468999999999999999999754 689999998865322 2235678899999999999999999998754 3
Q ss_pred eEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccc
Q 001562 845 EMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLAR 924 (1052)
Q Consensus 845 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~ 924 (1052)
..++|+||+. .++.++.. ..++++.+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||+++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 4699999995 47776652 3588999999999999999999999 99999999999999999999999999987
Q ss_pred cccccccccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCc
Q 001562 925 LLEVSETHATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRS 1003 (1052)
Q Consensus 925 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ...+.......+..
T Consensus 166 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~-------~~~~~~~~~~~~~~ 234 (342)
T cd07879 166 HADA----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-------LDQLTQILKVTGVP 234 (342)
T ss_pred CCCC----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHHhcCCC
Confidence 5432 1223457889999999876 4578899999999999999999999974321 11111111100000
Q ss_pred ccccc---------------chhh----cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1004 SELFL---------------PELW----EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1004 ~~~~~---------------~~l~----~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...+. +... ....+.....+.+++.+||+.||++||+++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 235 GPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred CHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00000 0000 0000122345889999999999999999999984
No 379
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=8.9e-31 Score=289.47 Aligned_cols=248 Identities=27% Similarity=0.398 Sum_probs=204.9
Q ss_pred hCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchh--hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQ--GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
.+.|.+.+.||+|.|++|..|.+ .++..||+|.+...... ..+.+.+|+++|+.+.|||||+++.+.+.+..+|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 45799999999999999999965 46899999998765433 2345789999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
||+.+|.+.+|+.++. ...+..+..++.|+++|++|+|++ .|+|||||++||+++.+..+||+|||++..+. .
T Consensus 135 eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~--~ 207 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD--Y 207 (596)
T ss_pred EeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec--c
Confidence 9999999999998874 566688889999999999999999 99999999999999999999999999998775 3
Q ss_pred cccccCccccccccccccccCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 931 THATTDVAGTFGYVAPEYATTCRV-SDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
....+...|++.|.|||++.+..| .+++|+||+|+++|-|+.|..||++..-. +....+.....
T Consensus 208 ~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk--------~Lr~rvl~gk~------- 272 (596)
T KOG0586|consen 208 GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK--------ELRPRVLRGKY------- 272 (596)
T ss_pred cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc--------cccchheeeee-------
Confidence 344566789999999999999876 58999999999999999999999843211 11111111111
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
..+.-...+..+++++++-.+|.+|++.+++.+.
T Consensus 273 ----rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 273 ----RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred ----cccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 1122223346789999999999999999998753
No 380
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-30 Score=240.67 Aligned_cols=258 Identities=22% Similarity=0.346 Sum_probs=200.7
Q ss_pred CCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhh--HHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 776 NFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQG--IQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
.|...++||+|.||+||+|+. .+++.||+|+++..+..+ .....+|+-+++.++|.|||+++++...+....+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 466678899999999999965 458899999997654432 45678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETH 932 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 932 (1052)
| ..+|..|...-. ..++.+.+.+++.|+++|+.++|++ ++.|||+||+|.++..+|++|++|||+++.++.. ..
T Consensus 83 c-dqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgip-vr 156 (292)
T KOG0662|consen 83 C-DQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP-VR 156 (292)
T ss_pred h-hHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCc-eE
Confidence 9 678999987764 6789999999999999999999999 9999999999999999999999999999987643 33
Q ss_pred cccCccccccccccccccCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHH-HHhCCccccccch
Q 001562 933 ATTDVAGTFGYVAPEYATTCR-VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLL-IKEGRSSELFLPE 1010 (1052)
Q Consensus 933 ~~~~~~g~~~y~aPE~~~~~~-~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 1010 (1052)
+....+.|..|.+|+++.+.+ |+...|+||-||++.|+....+|..|. .++....+.+ ..-|...+.-.|.
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg-------~dvddqlkrif~~lg~p~ed~wps 229 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG-------NDVDDQLKRIFRLLGTPTEDQWPS 229 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC-------CcHHHHHHHHHHHhCCCccccCCc
Confidence 444556789999999998865 778889999999999999977666532 1222222222 2223332222222
Q ss_pred h--------hcCCC---------HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1011 L--------WEAGP---------QENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1011 l--------~~~~~---------~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+ ++.++ +.....-++++.+.+.-+|.+|.++++.++
T Consensus 230 ~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 230 MTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred cccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 1 11111 122223467788888889999999998875
No 381
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=4.2e-30 Score=291.48 Aligned_cols=255 Identities=25% Similarity=0.366 Sum_probs=195.5
Q ss_pred hhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCc--hhhHHHHHHHHHHhccCCcCceeeEEEEEecCCe----
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAE---- 845 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 845 (1052)
..++|++.+.||+|+||.||+|... +++.||+|++.... .....++.+|+.++++++|||++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3567999999999999999999765 57899999886432 2234567789999999999999999998776554
Q ss_pred --EEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccc
Q 001562 846 --MFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLA 923 (1052)
Q Consensus 846 --~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla 923 (1052)
.++|+||+ +++|.+++.. ..+++..+.+++.|+++|++|||+. +|+||||+|+||++++++.++|+|||++
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccc
Confidence 89999999 7799999875 3589999999999999999999999 9999999999999999999999999999
Q ss_pred ccccccccccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHh-C
Q 001562 924 RLLEVSETHATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKE-G 1001 (1052)
Q Consensus 924 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~ 1001 (1052)
...... .....++..|+|||.+.+ ..++.++||||+|+++||+++|+.||...... +........ +
T Consensus 166 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~--------~~~~~i~~~~~ 233 (343)
T cd07851 166 RHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI--------DQLKRIMNLVG 233 (343)
T ss_pred cccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHHhcC
Confidence 865422 233457888999998865 36788999999999999999999999633211 111111110 0
Q ss_pred Cccccccchh-------------------hcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1002 RSSELFLPEL-------------------WEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1002 ~~~~~~~~~l-------------------~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...+.+.... ...........+.+++.+|++.+|++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 234 TPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred CCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000000000 00000112456899999999999999999999875
No 382
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-31 Score=282.19 Aligned_cols=244 Identities=27% Similarity=0.435 Sum_probs=197.5
Q ss_pred cceeeecCceEEEEEEe-cCCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCC
Q 001562 780 RNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGG 856 (1052)
Q Consensus 780 ~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 856 (1052)
.++||.|.||+||-|.+ ++|+.||||++.+-+. +...+..+|+.+++.++||.||.+...|+..+.+++|||.+ +|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 57999999999999965 4799999999976543 33478899999999999999999999999999999999999 55
Q ss_pred CHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC---CcEEEEecccccccccccccc
Q 001562 857 NLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE---LNAYLSDFGLARLLEVSETHA 933 (1052)
Q Consensus 857 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~---~~~kl~Dfgla~~~~~~~~~~ 933 (1052)
+..+.+-.....++++.....++.||+.|+.|||.+ +|+|+|+||+|||+.+. ..+||||||+|++++. ...
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE--ksF 722 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE--KSF 722 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch--hhh
Confidence 655555444457899888888999999999999999 99999999999999654 4699999999998863 344
Q ss_pred ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhc
Q 001562 934 TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWE 1013 (1052)
Q Consensus 934 ~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1013 (1052)
...++|||.|+|||+++.+.|...-||||.|||+|.-+.|..||..+. + +...+. ...-.+-+.-|+
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE----d-------IndQIQ--NAaFMyPp~PW~ 789 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE----D-------INDQIQ--NAAFMYPPNPWS 789 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc----c-------hhHHhh--ccccccCCCchh
Confidence 566899999999999999999999999999999999999999997321 1 111222 222233344454
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1014 AGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1014 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+.+ ..++|...++..=.+|-++++.+.
T Consensus 790 eis~~----AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 790 EISPE----AIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred hcCHH----HHHHHHHHHHHHHHHhcchHhhcc
Confidence 44443 778888889988889998876543
No 383
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-31 Score=264.01 Aligned_cols=252 Identities=26% Similarity=0.389 Sum_probs=195.6
Q ss_pred cccceeeecCceEEEEEEec-CCeEEEEEEeccCch-hhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEEeecC
Q 001562 778 SIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 778 ~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
+-...||.|+||+|++-.++ .|+..|||+++.... .+..++..|.+...+- +.||||+++|++..++..++.||.|
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM- 145 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM- 145 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-
Confidence 34467999999999999665 589999999987654 5567888888765554 7999999999999999999999999
Q ss_pred CCCHHHHHhh---ccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 855 GGNLETFIHK---KSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 855 ~gsL~~~l~~---~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
..|++.+-+. .....+++..+-+|+...+.||.||-+.. .|||||+||+|||++..|.+|+||||.+..+.. .
T Consensus 146 d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~--S 221 (361)
T KOG1006|consen 146 DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD--S 221 (361)
T ss_pred hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH--H
Confidence 6787765432 23456899999999999999999999886 899999999999999999999999999986642 2
Q ss_pred ccccCccccccccccccccC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccc
Q 001562 932 HATTDVAGTFGYVAPEYATT--CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLP 1009 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~--~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1052)
...+.-.|-..|||||.+.. ..|.-+|||||+|+++||+.||+.|+.... ++.+....+. .|+......
T Consensus 222 iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-------svfeql~~Vv-~gdpp~l~~- 292 (361)
T KOG1006|consen 222 IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-------SVFEQLCQVV-IGDPPILLF- 292 (361)
T ss_pred HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-------HHHHHHHHHH-cCCCCeecC-
Confidence 22333457788999999964 347889999999999999999999987432 2223222222 333332211
Q ss_pred hhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1010 ELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1010 ~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+....+....+.++|..|+..|-.+||...++.+
T Consensus 293 ---~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 293 ---DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred ---cccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 1112334556899999999999999999998765
No 384
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=1.5e-29 Score=285.75 Aligned_cols=265 Identities=22% Similarity=0.229 Sum_probs=190.9
Q ss_pred CCcccceeeecCceEEEEEEec-C--CeEEEEEEeccCc--hhhHHHHHHHHHHhccC-CcCceeeEEEEEecC----Ce
Q 001562 776 NFSIRNLIGTGGFGSTYKAELV-P--GYLVAVKKLSIGR--FQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGE----AE 845 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~ 845 (1052)
+|++.+.||+|+||.||+|... . +..||+|++.... ....+.+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4788899999999999999764 3 6789999886432 22245678899999999 599999999975432 45
Q ss_pred EEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccc
Q 001562 846 MFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARL 925 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~ 925 (1052)
.++++||+ +++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++.
T Consensus 81 ~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELM-EADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEecc-cCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 78888988 47999998654 4689999999999999999999999 999999999999999999999999999986
Q ss_pred cccccc---ccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCC-------CcchHHHH
Q 001562 926 LEVSET---HATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGN-------GFNIVSWA 994 (1052)
Q Consensus 926 ~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~-------~~~~~~~~ 994 (1052)
...... .......|+..|+|||.+.+ ..++.++||||+|+++|+|++|+.||......... .....++.
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETL 234 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 643221 11233468899999998766 46789999999999999999999998643211000 00000000
Q ss_pred HHHHHhCC-----ccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 995 KLLIKEGR-----SSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 995 ~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
........ ..............+.....+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000 00000000000001112456889999999999999999999874
No 385
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.9e-30 Score=292.15 Aligned_cols=259 Identities=26% Similarity=0.455 Sum_probs=213.5
Q ss_pred cchhhHHHhhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEEEec
Q 001562 765 LTYDNVVRATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVG 842 (1052)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 842 (1052)
..++.....++-|++.++||+|.+|.||+++. ++|+.+|+|+....... .++++.|+.+++.. .|||++.++|++..
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 44555666777899999999999999999954 46889999988765544 37788899999998 69999999999863
Q ss_pred -----CCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEE
Q 001562 843 -----EAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYL 917 (1052)
Q Consensus 843 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl 917 (1052)
++.+++|||||.+||..|+++...+..+.|+.+..|++.++.|+.+||.. .++|||||-.||+++.++.||+
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEE
Confidence 57899999999999999999988888999999999999999999999999 9999999999999999999999
Q ss_pred EeccccccccccccccccCccccccccccccccC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHH
Q 001562 918 SDFGLARLLEVSETHATTDVAGTFGYVAPEYATT-----CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVS 992 (1052)
Q Consensus 918 ~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~ 992 (1052)
+|||.+...... .......+|||.|||||++.- ..|+.++|+||+|++..||.-|.+|+-..-+
T Consensus 165 vDFGvSaQldsT-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP---------- 233 (953)
T KOG0587|consen 165 VDFGVSAQLDST-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP---------- 233 (953)
T ss_pred eeeeeeeeeecc-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch----------
Confidence 999999877643 344556789999999999853 3466789999999999999999999863221
Q ss_pred HHHHHHH--hCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 993 WAKLLIK--EGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 993 ~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
++.++. .+...... .+.....++.++|..|+..|-++||++.++++
T Consensus 234 -mraLF~IpRNPPPkLk-------rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 234 -MRALFLIPRNPPPKLK-------RPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred -hhhhccCCCCCCcccc-------chhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 122222 22222222 23445667999999999999999999998875
No 386
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2.5e-29 Score=306.69 Aligned_cols=145 Identities=30% Similarity=0.472 Sum_probs=131.1
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
++|++.+.||+|+||.||+|... +++.||+|++..... .....+..|+.+++.++||||+++++++......|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57999999999999999999765 689999999865432 23467888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLAR 924 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~ 924 (1052)
||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999764 3588999999999999999999999 99999999999999999999999999986
No 387
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.8e-29 Score=273.11 Aligned_cols=236 Identities=28% Similarity=0.364 Sum_probs=192.8
Q ss_pred eeecCceEEEEEEec-CCeEEEEEEeccCchh---hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCH
Q 001562 783 IGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQ---GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNL 858 (1052)
Q Consensus 783 Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 858 (1052)
||+|+||.||+|... +++.+|+|++...... ..+.+..|++++++++|+|++++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999765 5889999988654332 356788999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccCcc
Q 001562 859 ETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTDVA 938 (1052)
Q Consensus 859 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 938 (1052)
.+++... ..+++..+..++.|+++|+.|+|+. +++|+||+|+||+++.++.++|+|||.+....... .......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~ 154 (250)
T cd05123 81 FSHLSKE--GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFC 154 (250)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCc
Confidence 9999765 3589999999999999999999998 99999999999999999999999999998654322 1233446
Q ss_pred ccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHH
Q 001562 939 GTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQE 1018 (1052)
Q Consensus 939 g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1018 (1052)
++..|+|||...+...+.++|+||||+++||+++|+.||..... .+..+.... ... ..+..
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~-~~~----------~~~~~ 215 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--------KEIYEKILK-DPL----------RFPEF 215 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHhc-CCC----------CCCCC
Confidence 78899999999988889999999999999999999999963211 122222221 111 11222
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHH
Q 001562 1019 NLLGMMRLASTCTVETLSTRPSVKQ 1043 (1052)
Q Consensus 1019 ~~~~l~~Li~~cl~~dP~~RPs~~e 1043 (1052)
.+..+.+++.+||..||++||++++
T Consensus 216 ~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 216 LSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCHHHHHHHHHHhcCCHhhCCCccc
Confidence 2455889999999999999999943
No 388
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-30 Score=269.72 Aligned_cols=241 Identities=24% Similarity=0.353 Sum_probs=196.9
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 848 (1052)
..+|....+||+|+||.|.+|+.+ +.+.+|||+++.... .+.+--+.|-+++..- +-|.++.++.+|+.-+.+|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 346899999999999999999655 467899999876532 2333345677777666 57889999999999999999
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
||||+.||+|--.++.. ..+.++.+.-+|..||-||-+||++ |||.||+|..|||++.+|.+||+|||+++.- .
T Consensus 428 VMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn-i 501 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN-I 501 (683)
T ss_pred EEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccc-c
Confidence 99999999999988876 4688899999999999999999999 9999999999999999999999999999732 1
Q ss_pred cccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
-+...+....|||.|+|||++...+|+..+|.||+||++|||+.|++||+++.++ +..+.+...+-
T Consensus 502 ~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~--------elF~aI~ehnv------ 567 (683)
T KOG0696|consen 502 FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--------ELFQAIMEHNV------ 567 (683)
T ss_pred cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHHccC------
Confidence 2334455678999999999999999999999999999999999999999965433 33333322211
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCC
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRP 1039 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RP 1039 (1052)
.+|.....+...+.+..+...|.+|.
T Consensus 568 -----syPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 568 -----SYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred -----cCcccccHHHHHHHHHHhhcCCcccc
Confidence 23444555678888899999999986
No 389
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-30 Score=271.65 Aligned_cols=260 Identities=21% Similarity=0.284 Sum_probs=200.5
Q ss_pred hhCCCcccceeeecCceEEEEE-EecCCeEEEEEEeccCchhhHHHHHHHHHHhccCC-cC-----ceeeEEEEEecCCe
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIR-HK-----NLVTLIGYYVGEAE 845 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~ 845 (1052)
..++|++.+.+|+|.||.|.++ +...+..||||+++..... .+..+-|++++.++. +. -++.+.++|.-.++
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 3678999999999999999999 4445899999998754433 356677999999993 22 36777788988999
Q ss_pred EEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECC--------------
Q 001562 846 MFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDE-------------- 911 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~-------------- 911 (1052)
.|+|+|.+ |-|+.+++......+++...+..|+.|+++++++||+. +++|.|+||+||++.+
T Consensus 166 iCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred eEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCccc
Confidence 99999999 77999999998888899999999999999999999999 9999999999999832
Q ss_pred ------CCcEEEEeccccccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCC
Q 001562 912 ------ELNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYG 985 (1052)
Q Consensus 912 ------~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~ 985 (1052)
+..++|+|||.|..-. ......+.|..|.|||++.+-.++.++||||+|||+.|++||...|+....
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~----e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen--- 314 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDH----EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN--- 314 (415)
T ss_pred eeccCCCcceEEEecCCcceec----cCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc---
Confidence 2358999999998543 222556789999999999999999999999999999999999998874321
Q ss_pred CCcchHHHHHHHHHhCCc-------------ccccc-ch------------------hhcCCCHHHHHHHHHHHHHcccC
Q 001562 986 NGFNIVSWAKLLIKEGRS-------------SELFL-PE------------------LWEAGPQENLLGMMRLASTCTVE 1033 (1052)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~-------------~~~~~-~~------------------l~~~~~~~~~~~l~~Li~~cl~~ 1033 (1052)
...+ .+++.+...-.. ...+| ++ ........+...+.+|+++|+..
T Consensus 315 -~EHL-aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~f 392 (415)
T KOG0671|consen 315 -LEHL-AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEF 392 (415)
T ss_pred -HHHH-HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHcc
Confidence 1111 122111110000 00000 00 01111234556799999999999
Q ss_pred CCCCCCCHHHHHH
Q 001562 1034 TLSTRPSVKQVLI 1046 (1052)
Q Consensus 1034 dP~~RPs~~eil~ 1046 (1052)
||.+|+|++|+++
T Consensus 393 DP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 393 DPARRITLREALS 405 (415)
T ss_pred CccccccHHHHhc
Confidence 9999999999975
No 390
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3e-31 Score=259.61 Aligned_cols=261 Identities=24% Similarity=0.358 Sum_probs=196.5
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhh--HHHHHHHHHHhccCCcCceeeEEEEEec--------
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQG--IQQFDAEIGTLGRIRHKNLVTLIGYYVG-------- 842 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 842 (1052)
.+.|+...+||+|.||+||+|+.+ +|+.||+|++-....+. .....+|++++..++|+|++.+++.|..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 345777789999999999999665 57889998775433222 3456889999999999999999998763
Q ss_pred CCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccc
Q 001562 843 EAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGL 922 (1052)
Q Consensus 843 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgl 922 (1052)
...+|+||++|+ -+|.-.+.... .+++..++.+++.++..|+.|+|.. .|+|||+||.|++++.+|.+||+|||+
T Consensus 96 r~t~ylVf~~ce-hDLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 96 RATFYLVFDFCE-HDLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred cceeeeeHHHhh-hhHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccc
Confidence 345899999995 48888887653 6789999999999999999999999 999999999999999999999999999
Q ss_pred cccccccc---cccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH
Q 001562 923 ARLLEVSE---THATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLI 998 (1052)
Q Consensus 923 a~~~~~~~---~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
++.+...+ .......+.|..|.+||.+.| +.|+++.|||+-||++.||+||.+-+.+..+. ...+.+..+.
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq-----qql~~Is~Lc 245 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ-----QQLHLISQLC 245 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH-----HHHHHHHHHh
Confidence 98775332 122345677999999998876 56899999999999999999999888754322 1112222221
Q ss_pred HhCCccccccch-----hhcCC-----C-------HHHH------HHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 999 KEGRSSELFLPE-----LWEAG-----P-------QENL------LGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 999 ~~~~~~~~~~~~-----l~~~~-----~-------~~~~------~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. .....+.|. ++... + ++.. ....+++..++..||.+|+++++++.
T Consensus 246 G--s~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 246 G--SITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred c--cCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 1 111111111 11111 0 1111 24678999999999999999999875
No 391
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=3.4e-29 Score=268.45 Aligned_cols=219 Identities=26% Similarity=0.252 Sum_probs=175.0
Q ss_pred cCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCHHHHHhh
Q 001562 786 GGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNLETFIHK 864 (1052)
Q Consensus 786 G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 864 (1052)
|.+|.||+|.. .+++.||+|++.... .+..|...+....|||++++++++.+....++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 89999999955 468999999986543 223445555556799999999999999999999999999999999976
Q ss_pred ccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccCcccccccc
Q 001562 865 KSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTDVAGTFGYV 944 (1052)
Q Consensus 865 ~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~ 944 (1052)
. ..+++..+..++.|+++|++|||+. +|+||||||+||++++++.++++|||.+...... .....++..|+
T Consensus 79 ~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~ 149 (237)
T cd05576 79 F--LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYC 149 (237)
T ss_pred h--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCcccc
Confidence 5 3589999999999999999999999 9999999999999999999999999987655422 12234567899
Q ss_pred ccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHH
Q 001562 945 APEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMM 1024 (1052)
Q Consensus 945 aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 1024 (1052)
|||.+.+..++.++||||+|+++|||++|+.|+....... .. ... . ..+......+.
T Consensus 150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~--------------~~--~~~---~----~~~~~~~~~~~ 206 (237)
T cd05576 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI--------------NT--HTT---L----NIPEWVSEEAR 206 (237)
T ss_pred CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc--------------cc--ccc---c----CCcccCCHHHH
Confidence 9999988888999999999999999999998875321110 00 000 0 11222344588
Q ss_pred HHHHHcccCCCCCCCCH
Q 001562 1025 RLASTCTVETLSTRPSV 1041 (1052)
Q Consensus 1025 ~Li~~cl~~dP~~RPs~ 1041 (1052)
+++.+|++.||++||++
T Consensus 207 ~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 207 SLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHccCCHHHhcCC
Confidence 99999999999999986
No 392
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.4e-30 Score=270.11 Aligned_cols=257 Identities=25% Similarity=0.402 Sum_probs=198.1
Q ss_pred hhCCCcccceeeecCceEEEEE-EecCCeEEEEEEeccCchhh-------HHHHHHHHHHhccCCcCceeeEEEEEe-cC
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIGRFQG-------IQQFDAEIGTLGRIRHKNLVTLIGYYV-GE 843 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~-~~ 843 (1052)
..++|-+...||+|+|++||+| +....+.||||+-....... .+...+|.++-+.+.||.||++|+++. +.
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 3457888999999999999999 66678899999764432211 244678999999999999999999986 56
Q ss_pred CeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEC---CCCcEEEEec
Q 001562 844 AEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLD---EELNAYLSDF 920 (1052)
Q Consensus 844 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~---~~~~~kl~Df 920 (1052)
+.+|-|+|||+|.+|+-|++.+ +.+++.++..|+.||+.||.||.+. .++|||-|+||.|||+. ..|.+||+||
T Consensus 541 dsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence 7899999999999999999887 4689999999999999999999987 55899999999999995 4578999999
Q ss_pred cccccccccccc------cccCccccccccccccccCC----CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcch
Q 001562 921 GLARLLEVSETH------ATTDVAGTFGYVAPEYATTC----RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNI 990 (1052)
Q Consensus 921 gla~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~----~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~ 990 (1052)
|+++++....+. .+....||..|++||.+.-+ ..+.+.||||+|||+|+++.|+.||.-....
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ------- 690 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ------- 690 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH-------
Confidence 999988643322 23456799999999987533 4577999999999999999999999743221
Q ss_pred HHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 001562 991 VSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVL 1045 (1052)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil 1045 (1052)
+.+..++.....- ++.-...+....+...+|++|+++.-++|..+.++.
T Consensus 691 ----QdILqeNTIlkAt--EVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 691 ----QDILQENTILKAT--EVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred ----HHHHhhhchhcce--eccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 1222222221110 010011122334577899999999999998877764
No 393
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-29 Score=280.64 Aligned_cols=239 Identities=27% Similarity=0.311 Sum_probs=190.7
Q ss_pred hCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEEe
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
.++|++...+|.|+|+.|-.+.. .+++..+||++.... .+-.+|+.++... +|||++++.+.+.+..+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 45688888899999999999854 467889999997652 2234566555555 79999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE-CCCCcEEEEeccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILL-DEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill-~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
.+.++-+.+.+...+ .....+..|+.+|+.|+.|||++ ||||||+||.|||+ ++.++++|+|||.++..+..
T Consensus 397 ~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred hccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 999998888776653 33367778999999999999999 99999999999999 58899999999999976644
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
....+-|..|.|||+.....|++++|+||+|+++|+|++|+.||...... ......+..+...
T Consensus 470 ---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--------~ei~~~i~~~~~s------ 532 (612)
T KOG0603|consen 470 ---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--------IEIHTRIQMPKFS------ 532 (612)
T ss_pred ---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--------HHHHHhhcCCccc------
Confidence 12234577899999999999999999999999999999999999742221 1122222222111
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
........+|+.+|++.||.+||++.++..
T Consensus 533 ------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 533 ------ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 334455889999999999999999999864
No 394
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=7.4e-29 Score=294.52 Aligned_cols=261 Identities=25% Similarity=0.310 Sum_probs=170.2
Q ss_pred hhCCCcccceeeecCceEEEEEEec-C----CeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEE------Ee
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV-P----GYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGY------YV 841 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~ 841 (1052)
..++|++.+.||+|+||.||+|... + +..||+|++...... +....| .++...+.++..++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4568999999999999999999765 3 689999987543221 111111 1111122222222211 24
Q ss_pred cCCeEEEEEeecCCCCHHHHHhhccC------------------CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 001562 842 GEAEMFLVYNFLSGGNLETFIHKKSG------------------KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIK 903 (1052)
Q Consensus 842 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik 903 (1052)
.+...++|+||+++++|.++++.... .......+..++.|++.|++|||++ +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 56789999999999999999875421 0112344668999999999999999 99999999
Q ss_pred CCCEEECC-CCcEEEEeccccccccccccccccCccccccccccccccCC----------------------CCCchhHH
Q 001562 904 PSNILLDE-ELNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTC----------------------RVSDKADV 960 (1052)
Q Consensus 904 ~~Nill~~-~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----------------------~~~~~sDv 960 (1052)
|+|||+++ ++.+||+|||+|+..............+++.|+|||.+... .+..++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999986 57899999999986654444444556789999999965422 13345699
Q ss_pred HHHHHHHHHHHhCCCCCCCCcccC-----CCCcchHHHHHHHHHhCCccccccchhhcCC--CHHHHHHHHHHHHHcccC
Q 001562 961 YSFGVVLLELISGKRSLDPSFSEY-----GNGFNIVSWAKLLIKEGRSSELFLPELWEAG--PQENLLGMMRLASTCTVE 1033 (1052)
Q Consensus 961 ~slG~il~elltg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~l~~Li~~cl~~ 1033 (1052)
||+||++|||+++..|++...... ....+...|....... ..+++.... .........+|+.+|++.
T Consensus 363 wSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR------ASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred HHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc------cchhhhhhhhhccccchHHHHHHHHHccC
Confidence 999999999998766543211000 0011111221111100 000000000 000122356899999999
Q ss_pred CCCCCCCHHHHHH
Q 001562 1034 TLSTRPSVKQVLI 1046 (1052)
Q Consensus 1034 dP~~RPs~~eil~ 1046 (1052)
||++|||++|+++
T Consensus 437 dP~kR~ta~e~L~ 449 (566)
T PLN03225 437 KGRQRISAKAALA 449 (566)
T ss_pred CcccCCCHHHHhC
Confidence 9999999999986
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-29 Score=241.06 Aligned_cols=209 Identities=26% Similarity=0.401 Sum_probs=171.9
Q ss_pred HHHhhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccC-chhhHHHHHHHHHHhcc-CCcCceeeEEEEEecCCeE
Q 001562 770 VVRATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIG-RFQGIQQFDAEIGTLGR-IRHKNLVTLIGYYVGEAEM 846 (1052)
Q Consensus 770 ~~~~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~ 846 (1052)
.+...+.......||+|+||.|-+-++ .+|+..|+|++... ..+..++...|+.+..+ ..+|.+|.++|...+...+
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 444555566667899999999988865 46999999998754 33445677788886555 4799999999999999999
Q ss_pred EEEEeecCCCCHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccc
Q 001562 847 FLVYNFLSGGNLETFIHKK--SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLAR 924 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~ 924 (1052)
++.||.| ..||+.|-++. .+..+++..+-+||..+++|+.|||++. .++|||+||.|||++.+|++||||||.+.
T Consensus 121 wIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 121 WICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccce
Confidence 9999999 67888876542 3678999999999999999999999997 89999999999999999999999999998
Q ss_pred cccccccccccCccccccccccccccC----CCCCchhHHHHHHHHHHHHHhCCCCCCCCccc
Q 001562 925 LLEVSETHATTDVAGTFGYVAPEYATT----CRVSDKADVYSFGVVLLELISGKRSLDPSFSE 983 (1052)
Q Consensus 925 ~~~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~sDv~slG~il~elltg~~p~~~~~~~ 983 (1052)
.+..+- ..+.-.|-..|||||.+.. ..|+-++||||+|+.+.||.+++.||+....+
T Consensus 198 ~L~dSi--Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp 258 (282)
T KOG0984|consen 198 YLVDSI--AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP 258 (282)
T ss_pred eehhhh--HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence 765322 2222346678999998864 46888999999999999999999999866555
No 396
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=3.5e-28 Score=280.70 Aligned_cols=261 Identities=24% Similarity=0.297 Sum_probs=180.9
Q ss_pred hhCCCcccceeeecCceEEEEEEe-----------------cCCeEEEEEEeccCchhhHHH--------------HHHH
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAEL-----------------VPGYLVAVKKLSIGRFQGIQQ--------------FDAE 821 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E 821 (1052)
..++|++.++||+|+||.||+|.. ..++.||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 356899999999999999999953 235679999986543322222 3346
Q ss_pred HHHhccCCcCce-----eeEEEEEec--------CCeEEEEEeecCCCCHHHHHhhcc----------------------
Q 001562 822 IGTLGRIRHKNL-----VTLIGYYVG--------EAEMFLVYNFLSGGNLETFIHKKS---------------------- 866 (1052)
Q Consensus 822 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~---------------------- 866 (1052)
+.++.+++|.++ ++++++|.. ++..++||||+++++|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 667777653 356899999999999999987532
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccCcccccccccc
Q 001562 867 GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTDVAGTFGYVAP 946 (1052)
Q Consensus 867 ~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aP 946 (1052)
...+++..+..++.|+++|+.|+|+. +|+||||||+||+++.++.+||+|||++...............+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12346778889999999999999999 999999999999999999999999999976543322222223457899999
Q ss_pred ccccCCCC----------------------CchhHHHHHHHHHHHHHhCCC-CCCCCcc---cC-CCCcchHHHHHHHHH
Q 001562 947 EYATTCRV----------------------SDKADVYSFGVVLLELISGKR-SLDPSFS---EY-GNGFNIVSWAKLLIK 999 (1052)
Q Consensus 947 E~~~~~~~----------------------~~~sDv~slG~il~elltg~~-p~~~~~~---~~-~~~~~~~~~~~~~~~ 999 (1052)
|.+..... ..+.||||+||+++||++|.. ||..... +. ....+...|... .
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~--~ 457 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY--K 457 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh--c
Confidence 98754321 124699999999999999875 5542110 00 001112222211 1
Q ss_pred hCCccccccchhhcCCCHHHHHHHHHHHHHcccCCC---CCCCCHHHHHH
Q 001562 1000 EGRSSELFLPELWEAGPQENLLGMMRLASTCTVETL---STRPSVKQVLI 1046 (1052)
Q Consensus 1000 ~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP---~~RPs~~eil~ 1046 (1052)
... ++-..+.. ......+++.+++..+| .+|+|++|+++
T Consensus 458 ~~~----~~~~~~d~----~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 458 GQK----YDFSLLDR----NKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred ccC----CCcccccc----cChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 111 11111222 23457889999999766 68999999975
No 397
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.6e-30 Score=272.89 Aligned_cols=242 Identities=22% Similarity=0.289 Sum_probs=199.1
Q ss_pred CCCcccceeeecCceEEEEEEecCCe-EEEEEEecc---CchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELVPGY-LVAVKKLSI---GRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~~~~-~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
.++++...||.|+||.|=.+...... .+|+|++++ .+.+..+.+..|-.+|...+.|.||++|..|.++..+|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 34666778999999999999766433 377776654 34555677889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~ 930 (1052)
|-|-||.++..++.+ ..++.....-++..+++|++|||++ +||.||+||+|.+++.+|.+||.|||+|+.+..+
T Consensus 500 EaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g- 573 (732)
T KOG0614|consen 500 EACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG- 573 (732)
T ss_pred HhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC-
Confidence 999999999999876 5789999999999999999999999 9999999999999999999999999999988643
Q ss_pred cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccch
Q 001562 931 THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPE 1010 (1052)
Q Consensus 931 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1052)
..+-..+|||.|.|||++..+.+..++|.||+|+++||+++|.+||....+- ..+ ..+-.|-..-
T Consensus 574 -~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm-------ktY--n~ILkGid~i----- 638 (732)
T KOG0614|consen 574 -RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM-------KTY--NLILKGIDKI----- 638 (732)
T ss_pred -CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH-------HHH--HHHHhhhhhh-----
Confidence 3455678999999999999999999999999999999999999999843221 111 1111111111
Q ss_pred hhcCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 001562 1011 LWEAGPQENLLGMMRLASTCTVETLSTRPS 1040 (1052)
Q Consensus 1011 l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs 1040 (1052)
..|........++|++.+..+|.+|.-
T Consensus 639 ---~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 639 ---EFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ---hcccccchhHHHHHHHHHhcCcHhhhc
Confidence 123444556788999999999999984
No 398
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.4e-28 Score=258.28 Aligned_cols=264 Identities=24% Similarity=0.352 Sum_probs=201.5
Q ss_pred CCCcccceeeecCceEEEEE-EecCCeEEEEEEeccCchhhHHHHHHHHHHhccCC--------cCceeeEEEEEec---
Q 001562 775 GNFSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIR--------HKNLVTLIGYYVG--- 842 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~~--- 842 (1052)
++|.+.++||-|.|++||+| +.+..+.||+|+.+.+... .+....|++++++++ ..+||++++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhY-tEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHY-TEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHH-HHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 68999999999999999999 6667899999999866544 366788999999983 2479999999975
Q ss_pred -CCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC---------
Q 001562 843 -EAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE--------- 912 (1052)
Q Consensus 843 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~--------- 912 (1052)
+.++|+|+|++ |.+|..++.....+.++...+.+|+.||+.||.|||++| ||||.||||+|||+..+
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~~~~~~~ 233 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEIDPAKDAR 233 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccchhhhhh
Confidence 45899999999 889999999988889999999999999999999999998 99999999999998210
Q ss_pred --C-----------------------------------------------------------------------------
Q 001562 913 --L----------------------------------------------------------------------------- 913 (1052)
Q Consensus 913 --~----------------------------------------------------------------------------- 913 (1052)
+
T Consensus 234 ~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~ 313 (590)
T KOG1290|consen 234 EAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNE 313 (590)
T ss_pred hhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCccc
Confidence 0
Q ss_pred ------------------------------------------------------------------------------cE
Q 001562 914 ------------------------------------------------------------------------------NA 915 (1052)
Q Consensus 914 ------------------------------------------------------------------------------~~ 915 (1052)
.|
T Consensus 314 ~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~v 393 (590)
T KOG1290|consen 314 STVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRV 393 (590)
T ss_pred cchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccceeE
Confidence 13
Q ss_pred EEEeccccccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc-cCCCCcchH-HH
Q 001562 916 YLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFS-EYGNGFNIV-SW 993 (1052)
Q Consensus 916 kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~-~~~~~~~~~-~~ 993 (1052)
||+|||-|+.+... .+.-..|..|.|||++.+..|+..+||||++|++|||+||...|+|... .|..+.+.. .+
T Consensus 394 KIaDlGNACW~~kh----FT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i 469 (590)
T KOG1290|consen 394 KIADLGNACWVHKH----FTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALI 469 (590)
T ss_pred EEeeccchhhhhhh----hchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHH
Confidence 34444444433211 1112356789999999999999999999999999999999999986532 232222222 11
Q ss_pred -------HHHHHHhCCccccccch------------------hh--cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 994 -------AKLLIKEGRSSELFLPE------------------LW--EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 994 -------~~~~~~~~~~~~~~~~~------------------l~--~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+.+...|+..+.|..+ +. -..+.++..++.+++.-|++.+|++||||.+.++
T Consensus 470 ~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~ 549 (590)
T KOG1290|consen 470 MELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK 549 (590)
T ss_pred HHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence 13333344433322211 11 1235778889999999999999999999999875
No 399
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=7.4e-28 Score=258.88 Aligned_cols=238 Identities=30% Similarity=0.437 Sum_probs=194.0
Q ss_pred CceEEEEEEecC-CeEEEEEEeccCchhh-HHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCHHHHHhh
Q 001562 787 GFGSTYKAELVP-GYLVAVKKLSIGRFQG-IQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNLETFIHK 864 (1052)
Q Consensus 787 ~~g~V~~~~~~~-~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 864 (1052)
+||.||+|.... ++.+|+|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 589999998764 8999999997665544 67899999999999999999999999999999999999999999999976
Q ss_pred ccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccCcccccccc
Q 001562 865 KSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTDVAGTFGYV 944 (1052)
Q Consensus 865 ~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~ 944 (1052)
.. .+++..+..++.+++.++.|||+. +++|+||+|+||++++++.++++|||.+....... ......++..|+
T Consensus 81 ~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~ 153 (244)
T smart00220 81 RG--RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYM 153 (244)
T ss_pred cc--CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCC
Confidence 53 388999999999999999999999 99999999999999999999999999998765332 233456788999
Q ss_pred ccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHH
Q 001562 945 APEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMM 1024 (1052)
Q Consensus 945 aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 1024 (1052)
+||...+..++.++|||++|+++|++++|..||.... ......+... ....... ......+..+.
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-------~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~ 218 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD-------QLLELFKKIG-KPKPPFP-------PPEWKISPEAK 218 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------cHHHHHHHHh-ccCCCCc-------cccccCCHHHH
Confidence 9999998888999999999999999999999986421 1112222221 1111100 00000345688
Q ss_pred HHHHHcccCCCCCCCCHHHHHH
Q 001562 1025 RLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1025 ~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+++.+|+..+|++||++.++++
T Consensus 219 ~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 219 DLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHccCCchhccCHHHHhh
Confidence 9999999999999999999986
No 400
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.8e-28 Score=247.42 Aligned_cols=249 Identities=22% Similarity=0.338 Sum_probs=197.2
Q ss_pred hCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccC---chhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIG---RFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 848 (1052)
-.+|.+.++||+|+|++|..+++. +.+.+|+|++++. +.++.+....|-.+..+. +||.+|.++.+|..+...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 457999999999999999999765 5788999988754 333455566777777766 79999999999999999999
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
|.||++||+|--++++. ..++++.+.-+...|.-|+.|||++ |||.||+|..||++|..|.+|++|+|+++.- -
T Consensus 329 vieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~-l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG-L 402 (593)
T ss_pred EEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC-C
Confidence 99999999998888776 4799999999999999999999999 9999999999999999999999999999743 2
Q ss_pred cccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
.....+....|||.|.|||++++..|....|.|++||+++||+.|+.||+--... ....+-..+.-.++-+....
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~-n~d~ntedylfqvilekqir---- 477 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMD-NPDMNTEDYLFQVILEKQIR---- 477 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCC-CcccchhHHHHHHHhhhccc----
Confidence 2344556789999999999999999999999999999999999999999732111 11111122222222222111
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCC
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRP 1039 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RP 1039 (1052)
.|.....+...+++.-++.||++|.
T Consensus 478 ------iprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 478 ------IPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ------ccceeehhhHHHHHHhhcCCcHHhc
Confidence 1222233456788889999999986
No 401
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.95 E-value=7.2e-29 Score=281.39 Aligned_cols=244 Identities=25% Similarity=0.337 Sum_probs=188.2
Q ss_pred CcccceeeecCce-EEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEEeecC
Q 001562 777 FSIRNLIGTGGFG-STYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g-~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
|.-.+++|.|+.| .||+|... |+.||||++-... .....+|++.++.- .|||||++++.-.++...|++.|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 4445678999988 57899775 8899999885332 34567899999988 6999999999999999999999999
Q ss_pred CCCHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECC---C--CcEEEEecccccccc
Q 001562 855 GGNLETFIHKK--SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDE---E--LNAYLSDFGLARLLE 927 (1052)
Q Consensus 855 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~---~--~~~kl~Dfgla~~~~ 927 (1052)
..+|.++++.. ............+..|+++|+++||+. +|||||+||+||||+. + .+++|+|||+++...
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 67999999874 211122244567889999999999998 9999999999999976 3 468999999999886
Q ss_pred cccc--ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCcccCCCCcchHHHHHHHHHhCCcc
Q 001562 928 VSET--HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISG-KRSLDPSFSEYGNGFNIVSWAKLLIKEGRSS 1004 (1052)
Q Consensus 928 ~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
.... .......||.+|+|||.+....-+.++||||+||++|+.++| ..||....... ..+.......
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~----------~NIl~~~~~L 732 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ----------ANILTGNYTL 732 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh----------hhhhcCccce
Confidence 4432 334567899999999999998888899999999999999996 89997543221 1111111111
Q ss_pred ccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1005 ELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1005 ~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
..+. . ..++ ...+||.+|+++||..||++.+|+.
T Consensus 733 ~~L~-----~-~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 733 VHLE-----P-LPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred eeec-----c-CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 1111 1 1111 6889999999999999999999874
No 402
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=9.7e-28 Score=261.98 Aligned_cols=214 Identities=23% Similarity=0.418 Sum_probs=178.8
Q ss_pred CCcccceeeecCceEEEEEE-ecCCeEEEEEEeccCch---hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 776 NFSIRNLIGTGGFGSTYKAE-LVPGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
-|...+.||-|+||+|.++. ..+...||.|.+++.+. ......++|.++|..-..+=||++|-.|.+++.+|+|||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 37778899999999999994 44567789998876543 334567899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc---c
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE---V 928 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~---~ 928 (1052)
|++||++-.+|-+. ..+.++.+..++..+.+|+++.|.. |+|||||||+|||||.+|.+||+|||++.-+. .
T Consensus 710 YIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd 784 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 784 (1034)
T ss_pred ccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceeccc
Confidence 99999999998776 4678888888999999999999999 99999999999999999999999999986441 1
Q ss_pred ccccc--------------------------------------ccCccccccccccccccCCCCCchhHHHHHHHHHHHH
Q 001562 929 SETHA--------------------------------------TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLEL 970 (1052)
Q Consensus 929 ~~~~~--------------------------------------~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~el 970 (1052)
+.++. ....+||+.|+|||++....++..+|.||.|||+|||
T Consensus 785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em 864 (1034)
T KOG0608|consen 785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEM 864 (1034)
T ss_pred cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHH
Confidence 11000 1124699999999999999999999999999999999
Q ss_pred HhCCCCCCCCcccCCCCcchHHHHH
Q 001562 971 ISGKRSLDPSFSEYGNGFNIVSWAK 995 (1052)
Q Consensus 971 ltg~~p~~~~~~~~~~~~~~~~~~~ 995 (1052)
+.|++||....+. +.+..+..|..
T Consensus 865 ~~g~~pf~~~tp~-~tq~kv~nw~~ 888 (1034)
T KOG0608|consen 865 LVGQPPFLADTPG-ETQYKVINWRN 888 (1034)
T ss_pred hhCCCCccCCCCC-cceeeeeehhh
Confidence 9999999866554 33444555543
No 403
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=2.8e-28 Score=235.66 Aligned_cols=267 Identities=19% Similarity=0.271 Sum_probs=199.4
Q ss_pred ccchhhHHHh---hCCCcccceeeecCceEEEEEE-ecCCeEEEEEEeccCchhhHHHHHHHHHHhccCC-cCceeeEEE
Q 001562 764 ELTYDNVVRA---TGNFSIRNLIGTGGFGSTYKAE-LVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIR-HKNLVTLIG 838 (1052)
Q Consensus 764 ~~~~~~~~~~---~~~~~~~~~Lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~ 838 (1052)
..+|+..... .++|++.+++|+|.|++||.|. ..+.++++||+++... .+.+.+|+.+++.++ ||||+++++
T Consensus 24 YWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~D 100 (338)
T KOG0668|consen 24 YWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLD 100 (338)
T ss_pred hcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhh
Confidence 3344443333 3479999999999999999994 4567889999987544 356789999999996 999999999
Q ss_pred EEecC--CeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC-CcE
Q 001562 839 YYVGE--AEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE-LNA 915 (1052)
Q Consensus 839 ~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~-~~~ 915 (1052)
+..+. ....+|+||+.+.+....-. .++..++..++.+++.|+.|+|++ ||+|||+||.|+|+|.. ..+
T Consensus 101 iV~Dp~SktpaLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkL 172 (338)
T KOG0668|consen 101 IVKDPESKTPSLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKL 172 (338)
T ss_pred hhcCccccCchhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhcee
Confidence 98764 46789999999988776653 477788899999999999999999 99999999999999865 469
Q ss_pred EEEeccccccccccccccccCccccccccccccccC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHH
Q 001562 916 YLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATT-CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWA 994 (1052)
Q Consensus 916 kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 994 (1052)
+++|+|+|..+.+...+. -.+.+..|.-||.+-. ..|...-|+|||||++..|+..+.||..... +..+++..+
T Consensus 173 rlIDWGLAEFYHp~~eYn--VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~d---N~DQLVkIa 247 (338)
T KOG0668|consen 173 RLIDWGLAEFYHPGKEYN--VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---NYDQLVKIA 247 (338)
T ss_pred eeeecchHhhcCCCceee--eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCC---CHHHHHHHH
Confidence 999999999887654433 2356677899998865 4567788999999999999999999863322 233344333
Q ss_pred HHHHHh------CCccccccchhhc---CC------------C-HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 995 KLLIKE------GRSSELFLPELWE---AG------------P-QENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 995 ~~~~~~------~~~~~~~~~~l~~---~~------------~-~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+.+-.+ ++....++|.+.. .. . .-...+..+++.+.+.+|-.+|+|++|...
T Consensus 248 kVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 248 KVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 221110 1111223333211 11 1 111245789999999999999999999864
No 404
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=5.6e-29 Score=246.10 Aligned_cols=260 Identities=23% Similarity=0.343 Sum_probs=192.9
Q ss_pred CcccceeeecCceEEEEE-EecCCeEEEEEEeccC--chhhHHHHHHHHHHhccCCcCceeeEEEEEecC-----CeEEE
Q 001562 777 FSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIG--RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE-----AEMFL 848 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~l 848 (1052)
.+..+.||.|+||.||.+ +-++|+.||.|++... +....+++.+|+.++..++|+|++..+++..-. .+.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 455688999999999998 4467999999988542 223457788999999999999999988876532 34688
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~ 928 (1052)
++|.| ..+|...+-. .+.++.+.+.-+.+||++|+.|||+. +|.||||||.|.++.++-.+||||||+|+....
T Consensus 135 ~TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccch
Confidence 88888 4577666543 36788889999999999999999999 999999999999999999999999999998776
Q ss_pred cccccccCccccccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHH------------HHH
Q 001562 929 SETHATTDVAGTFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVS------------WAK 995 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~------------~~~ 995 (1052)
.+...+...+.|-.|.|||.+.|. .|+.+.||||.|||+.|++.++..|.... .....+ .++
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~-----PiqQL~lItdLLGTPs~EaMr 283 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG-----PIEQLQMIIDLLGTPSQEAMK 283 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC-----hHHHHHHHHHHhCCCcHHHHH
Confidence 666556666778899999999885 58889999999999999998887775321 111111 122
Q ss_pred HHHHhCCc-------cccccchhhcCC-CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 996 LLIKEGRS-------SELFLPELWEAG-PQENLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 996 ~~~~~~~~-------~~~~~~~l~~~~-~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
......+. ...-.+.++.-. +.....+...+...++..||++|.+..+.++.
T Consensus 284 ~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 284 YACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred HHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 22221111 111111222111 11222345677888999999999998887653
No 405
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=1.7e-27 Score=242.49 Aligned_cols=254 Identities=27% Similarity=0.362 Sum_probs=199.6
Q ss_pred CCCcccceeeecCceEEEEE-EecCCeEEEEEEeccC--chhhHHHHHHHHHHhccCCcCceeeEEEEEecC------Ce
Q 001562 775 GNFSIRNLIGTGGFGSTYKA-ELVPGYLVAVKKLSIG--RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGE------AE 845 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~-~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 845 (1052)
.+|.-.+.+|.|+- .|..| +.-.+++||+|+.... .....++..+|..++..+.|+|+++++.++.-. ..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 35677788899988 55555 4446899999987543 233456778899999999999999999998743 35
Q ss_pred EEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccc
Q 001562 846 MFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARL 925 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~ 925 (1052)
+|+|||+| ..+|...+.. .++-+.+.++..|+++|+.|||+. ||+|||+||+||++..+..+||.|||+|+.
T Consensus 96 ~y~v~e~m-~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILM----ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHHHHHhh-hhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcc
Confidence 79999999 7799999874 378889999999999999999999 999999999999999999999999999985
Q ss_pred ccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccc
Q 001562 926 LEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSE 1005 (1052)
Q Consensus 926 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1052)
-... ...+.++.+..|.|||++.+..+.+.+||||.||++.||++|+.-|.+ .....+|.+....-|...+
T Consensus 168 e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g-------~d~idQ~~ki~~~lgtpd~ 238 (369)
T KOG0665|consen 168 EDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG-------KDHIDQWNKIIEQLGTPDP 238 (369)
T ss_pred cCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC-------chHHHHHHHHHHHhcCCCH
Confidence 4432 456677889999999999998899999999999999999999988763 2334455544444443333
Q ss_pred cccchhhc---------------------------C---CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1006 LFLPELWE---------------------------A---GPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1006 ~~~~~l~~---------------------------~---~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.+...+.+ . .+.-......+++.+|+-.+|++|-+++++++
T Consensus 239 ~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 239 SFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 22222110 0 01122334789999999999999999999875
No 406
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=3.1e-25 Score=232.65 Aligned_cols=210 Identities=34% Similarity=0.573 Sum_probs=183.8
Q ss_pred eeecCceEEEEEEecC-CeEEEEEEeccCchh-hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCHHH
Q 001562 783 IGTGGFGSTYKAELVP-GYLVAVKKLSIGRFQ-GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNLET 860 (1052)
Q Consensus 783 Lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 860 (1052)
||+|.+|.||++.... ++.+++|++...... ..+.+.+|++.++.++|++++++++++......++++|++++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999997754 899999998765543 34678999999999999999999999999899999999999999999
Q ss_pred HHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECC-CCcEEEEeccccccccccccccccCccc
Q 001562 861 FIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDE-ELNAYLSDFGLARLLEVSETHATTDVAG 939 (1052)
Q Consensus 861 ~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~-~~~~kl~Dfgla~~~~~~~~~~~~~~~g 939 (1052)
++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+........ ......+
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~ 155 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVG 155 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccC
Confidence 998653 4589999999999999999999999 9999999999999999 89999999999986643321 2233457
Q ss_pred cccccccccccCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHH
Q 001562 940 TFGYVAPEYATTC-RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQE 1018 (1052)
Q Consensus 940 ~~~y~aPE~~~~~-~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1018 (1052)
...|++||..... .++.++|+|++|++++++
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------ 187 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------ 187 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------
Confidence 7899999999887 788899999999999999
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 001562 1019 NLLGMMRLASTCTVETLSTRPSVKQVLIK 1047 (1052)
Q Consensus 1019 ~~~~l~~Li~~cl~~dP~~RPs~~eil~~ 1047 (1052)
..+.+++.+|++.+|++||+++++++.
T Consensus 188 --~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 --PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred --HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 347889999999999999999999864
No 407
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.93 E-value=7e-27 Score=253.88 Aligned_cols=197 Identities=23% Similarity=0.373 Sum_probs=170.0
Q ss_pred hCCCcccceeeecCceEEEEEEecC-CeEEEEEEeccCch--------hhHHHHHHHHHHhccCC---cCceeeEEEEEe
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP-GYLVAVKKLSIGRF--------QGIQQFDAEIGTLGRIR---HKNLVTLIGYYV 841 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---h~niv~l~~~~~ 841 (1052)
..+|...+.+|+|+||.|+.|.++. ...|+||.+.+.+. .....+-.|+++|..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 3468999999999999999997664 57788998865432 11223456999999997 999999999999
Q ss_pred cCCeEEEEEeec-CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEec
Q 001562 842 GEAEMFLVYNFL-SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDF 920 (1052)
Q Consensus 842 ~~~~~~lv~e~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Df 920 (1052)
+++.+|++||.. ++.+|.++++.+ ..+++.++..|++||+.|+++||++ ||||||||-+||.++.+|-+||+||
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeec
Confidence 999999999975 556999999877 4799999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccccCccccccccccccccCCCCC-chhHHHHHHHHHHHHHhCCCCCC
Q 001562 921 GLARLLEVSETHATTDVAGTFGYVAPEYATTCRVS-DKADVYSFGVVLLELISGKRSLD 978 (1052)
Q Consensus 921 gla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDv~slG~il~elltg~~p~~ 978 (1052)
|.|..... ......+||..|.|||++.|..|- ..-|||++|+++|.++....||+
T Consensus 715 gsaa~~ks---gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKS---GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcC---CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99986643 334557899999999999998874 56799999999999999888886
No 408
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.8e-26 Score=228.91 Aligned_cols=253 Identities=20% Similarity=0.302 Sum_probs=190.8
Q ss_pred hCCCcccceeeecCceEEEEEEecC-CeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEE-EecCCeEEEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP-GYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGY-YVGEAEMFLVY 850 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~-~~~~~~~~lv~ 850 (1052)
.+.|.+.+.+|+|.||.+-+++++. .+.+++|.+..... ..++|.+|..---.+ .|.||+.-|++ |+..+.+++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 3568999999999999999998864 67899998865543 357888888766566 59999988775 66777889999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEC--CCCcEEEEeccccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLD--EELNAYLSDFGLARLLEV 928 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~--~~~~~kl~Dfgla~~~~~ 928 (1052)
||++.|+|.+-+... .+.+....+++.|+++|+.|+|++ .+||||||.+||||- +..++|+||||..+..+.
T Consensus 102 E~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred ccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 999999999988664 588999999999999999999999 999999999999993 334799999999986653
Q ss_pred cccccccCccccccccccccccCC-----CCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCc
Q 001562 929 SETHATTDVAGTFGYVAPEYATTC-----RVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRS 1003 (1052)
Q Consensus 929 ~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1052)
...+. .-+..|.+||..... ...+.+|||.||++++.++||+.||...... +..+.+|.+- ..+..
T Consensus 176 tV~~~----~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~---d~~Y~~~~~w--~~rk~ 246 (378)
T KOG1345|consen 176 TVKYL----EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM---DKPYWEWEQW--LKRKN 246 (378)
T ss_pred eehhh----hhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc---CchHHHHHHH--hcccC
Confidence 22211 234568999976542 2356789999999999999999999854333 3344444433 23322
Q ss_pred cccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001562 1004 SELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKL 1048 (1052)
Q Consensus 1004 ~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L 1048 (1052)
.. .|+......+ .++++.++-+.++|++|-...++.++.
T Consensus 247 ~~--~P~~F~~fs~----~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 247 PA--LPKKFNPFSE----KALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred cc--CchhhcccCH----HHHHHHHHhcCCcccccchhHHHHHHH
Confidence 21 2333333333 477888999999999997666655543
No 409
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=3.6e-27 Score=260.42 Aligned_cols=253 Identities=25% Similarity=0.388 Sum_probs=204.4
Q ss_pred hhCCCcccceeeecCceEEEEEE-ecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAE-LVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
..++|+...++|.|.||.||||+ .+.++..|+|+++........-...|+-+++..+||||+.++|.+...+..+++||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 34579999999999999999994 45789999999988777777788889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|+.+|+|.+.-+-. ..+++.++..+.+...+|++|||++ |-+|||||-.||++++.|.+|++|||.+..+.. ..
T Consensus 93 ycgggslQdiy~~T--gplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita-ti 166 (829)
T KOG0576|consen 93 YCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA-TI 166 (829)
T ss_pred ecCCCcccceeeec--ccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh-hh
Confidence 99999999977654 5799999999999999999999999 999999999999999999999999999987753 23
Q ss_pred ccccCccccccccccccc---cCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhC-Cccccc
Q 001562 932 HATTDVAGTFGYVAPEYA---TTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEG-RSSELF 1007 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~---~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 1007 (1052)
.+.....||+.|||||+. +.+.|...+|||+.|+...|+---.+|...--+ .......-+.+ .....-
T Consensus 167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp--------mr~l~LmTkS~~qpp~lk 238 (829)
T KOG0576|consen 167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP--------MRALFLMTKSGFQPPTLK 238 (829)
T ss_pred hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch--------HHHHHHhhccCCCCCccc
Confidence 445667899999999976 346688899999999999999877766431100 01111111111 111122
Q ss_pred cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1008 LPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1008 ~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
|+ ......+-++++.|+..+|++||++..+++
T Consensus 239 Dk-------~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 239 DK-------TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CC-------ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 22 233445889999999999999999987764
No 410
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=5.2e-26 Score=243.86 Aligned_cols=211 Identities=23% Similarity=0.267 Sum_probs=176.1
Q ss_pred CCccchhhHHHhhCCCcccceeeecCceEEEEEEe-cCCeEEEEEEeccCchhhHHHHHHHHHHhccCC------cCcee
Q 001562 762 PAELTYDNVVRATGNFSIRNLIGTGGFGSTYKAEL-VPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIR------HKNLV 834 (1052)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~Lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv 834 (1052)
..+|.+.--+....+|.+....|+|-|++|.+|.. ..|..||||++.....-. +.=..|+++|+++. --|++
T Consensus 419 EGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~-KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 419 EGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMH-KTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred cceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHh-hhhhHHHHHHHHhhccCchhhhHHH
Confidence 34555666667778999999999999999999944 458899999997654332 33467999999994 35889
Q ss_pred eEEEEEecCCeEEEEEeecCCCCHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC
Q 001562 835 TLIGYYVGEAEMFLVYNFLSGGNLETFIHKKS-GKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL 913 (1052)
Q Consensus 835 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~ 913 (1052)
+++..|....++|+|+|.+ .-+|.+.+++.. +..+....+..++.|+.-||..|-.. +|+|.||||.||||.+..
T Consensus 498 rl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k 573 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESK 573 (752)
T ss_pred HHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCc
Confidence 9999999999999999988 679999998764 45688889999999999999999988 999999999999998764
Q ss_pred -cEEEEeccccccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 001562 914 -NAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPS 980 (1052)
Q Consensus 914 -~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~ 980 (1052)
.+||||||.|......+ .+.+..+..|.|||++.|..|....|+||+||.+||+.||+..|.+.
T Consensus 574 ~iLKLCDfGSA~~~~ene---itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 574 NILKLCDFGSASFASENE---ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred ceeeeccCcccccccccc---ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 57999999998665332 22234566899999999999999999999999999999999988644
No 411
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=1.2e-24 Score=231.01 Aligned_cols=198 Identities=35% Similarity=0.548 Sum_probs=173.3
Q ss_pred CcccceeeecCceEEEEEEecC-CeEEEEEEeccCchh-hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecC
Q 001562 777 FSIRNLIGTGGFGSTYKAELVP-GYLVAVKKLSIGRFQ-GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
|++.+.||.|++|.||+|.... ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++|+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5677899999999999997764 889999999876554 56788999999999999999999999999899999999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT 934 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 934 (1052)
+++|.+++..... .+++..+..++.+++.++.+||+. +++|+|++|.||+++.++.++|+|||.+...........
T Consensus 81 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (225)
T smart00221 81 GGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALL 156 (225)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccc
Confidence 9999999987542 278999999999999999999999 999999999999999999999999999987654321122
Q ss_pred cCccccccccccccc-cCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 001562 935 TDVAGTFGYVAPEYA-TTCRVSDKADVYSFGVVLLELISGKRSLD 978 (1052)
Q Consensus 935 ~~~~g~~~y~aPE~~-~~~~~~~~sDv~slG~il~elltg~~p~~ 978 (1052)
....++..|++||.. ....++.++|||+||++++||++|+.||+
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 334577889999998 66677889999999999999999999996
No 412
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=7.5e-26 Score=223.99 Aligned_cols=250 Identities=21% Similarity=0.334 Sum_probs=197.0
Q ss_pred CCcccceeeecCceEEEEEEecCCeEEEEEEeccCch--hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 776 NFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
+..+..+|.+...|+.|+|+|+ |..+++|++...+. ...++|.+|.-.++.+.||||.+++|.|.......++..||
T Consensus 191 ~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 4455677899999999999998 66677787755432 23478999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEE--ecccccccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLS--DFGLARLLEVSET 931 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~--Dfgla~~~~~~~~ 931 (1052)
+.|+|+..++...+-..+..++.+++.++|+|++|||+.- |-|----+.++.|++|++.+++|. |--++.. +
T Consensus 270 p~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsfq----e- 343 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ----E- 343 (448)
T ss_pred cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeeee----c-
Confidence 9999999999988778899999999999999999999873 334445689999999999888764 3222221 1
Q ss_pred ccccCccccccccccccccCCCC---CchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcccccc
Q 001562 932 HATTDVAGTFGYVAPEYATTCRV---SDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFL 1008 (1052)
Q Consensus 932 ~~~~~~~g~~~y~aPE~~~~~~~---~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1052)
....-.|.||+||.++.++. -.++|+|||++++||+-|...||... ++.+-++ + +. .
T Consensus 344 ---~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadl-spmecgm------k-ia---------l 403 (448)
T KOG0195|consen 344 ---VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADL-SPMECGM------K-IA---------L 403 (448)
T ss_pred ---cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccC-Cchhhhh------h-hh---------h
Confidence 11223578999999987654 35789999999999999999999743 2221111 1 11 1
Q ss_pred chhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhccC
Q 001562 1009 PELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQLK 1052 (1052)
Q Consensus 1009 ~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ik 1052 (1052)
+.+.-..|+.....+.+++.-|+.+||.+||.++.++-.||+++
T Consensus 404 eglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 404 EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 12333456777778999999999999999999999999999874
No 413
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=1.6e-26 Score=241.08 Aligned_cols=294 Identities=17% Similarity=0.110 Sum_probs=178.8
Q ss_pred ceEeecCCCceEEEEEcccCCCCCCCCcccccccchhhhCCCCCCeeEecCCCceecCCCCccCCCCccEEEccCccccc
Q 001562 82 GVTCDHFTGRVTALRITGKATPWPSKSSVISGTLSASIAKLTELRTLSVPHNSFSGEIPAGVGELRLLEVLELQGNNFSG 161 (1052)
Q Consensus 82 gV~C~~~~~~v~~l~l~~~~~~~~~~~~~l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 161 (1052)
-|+|+..+..-++-++|..+ +.+.|..|+|+...|.+|+.+++|+.||||+|+|+.
T Consensus 50 ~VdCr~~GL~eVP~~LP~~t------------------------veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~ 105 (498)
T KOG4237|consen 50 IVDCRGKGLTEVPANLPPET------------------------VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISF 105 (498)
T ss_pred eEEccCCCcccCcccCCCcc------------------------eEEEeccCCcccCChhhccchhhhceecccccchhh
Confidence 38888766666776776655 355566666664444456666666666666666665
Q ss_pred cCCccccCcCcCCeEeccc-ccccccCCccccCCCCCcEEEccCCcccCccccCCCcccCCCCEEEccCCcCCCCCCccc
Q 001562 162 KIPYQMSNLERLRVLNLSF-NSFSGEVPRGLIGNGELSVIDMSSNRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEI 240 (1052)
Q Consensus 162 ~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 240 (1052)
+-|++|.++++|..|-+.+ |+|+..--+.|.++..|+.|.+.-|++.- +..+.+..+++|..|.+.+|.+...--..|
T Consensus 106 I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~C-ir~~al~dL~~l~lLslyDn~~q~i~~~tf 184 (498)
T KOG4237|consen 106 IAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINC-IRQDALRDLPSLSLLSLYDNKIQSICKGTF 184 (498)
T ss_pred cChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcc-hhHHHHHHhhhcchhcccchhhhhhccccc
Confidence 5566666666555554444 55653333455556666666666665553 444555556666666666666653222256
Q ss_pred CCCCCCCEEEcCCCc------------cccccchhhhcCCCCCEEEccCCCCCCCCCcccccC-CCCCeeecccCccccc
Q 001562 241 GKCRNLKNLLLDGNI------------LEGSIPKEIGTISELKVLDVSRNSLTDRIPVELADC-SKLSVLVLTNIDASLD 307 (1052)
Q Consensus 241 ~~l~~L~~L~L~~N~------------l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~L~~n~~~~~ 307 (1052)
..+.+++.+.+..|. .....|.+++...-..-..+.++++...-+..|... ..+..-..+.+
T Consensus 185 ~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d----- 259 (498)
T KOG4237|consen 185 QGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSED----- 259 (498)
T ss_pred cchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhcccc-----
Confidence 666666666666655 122334455555555555566666654444333221 11111001110
Q ss_pred CCCCCCccccccCCCch-hhhcccCCcEeecCCCCCcccCCccccCCCCccEEeCCCCcccccCCccccccCCCCEEeCC
Q 001562 308 LDNSRGEFSAFDGGVPY-ELLLSRSLEVLWAPRANLGGRLPDNWSESCSLKVLNLGQNSLKGAVPKSLGMCRNLTYLDLS 386 (1052)
Q Consensus 308 l~~~~~~~~~~~~~~p~-~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 386 (1052)
..++..|. .+..+++|+.|+|++|.++++-+.+|.+...+++|.|..|+|...--..|.++..|+.|+|.
T Consensus 260 ---------~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~ 330 (498)
T KOG4237|consen 260 ---------FPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLY 330 (498)
T ss_pred ---------CcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeec
Confidence 11222333 35667778888888888888888888888888888888888887777788888888888888
Q ss_pred CCcCccCCCCCCC-CCccceEecccCccc
Q 001562 387 LNNLEGYLPMQLP-VPCMVYFNVSQNNIT 414 (1052)
Q Consensus 387 ~N~l~~~~p~~~~-~~~L~~L~ls~N~l~ 414 (1052)
+|+|+...|..|. +.+|..|+|-.|.+.
T Consensus 331 ~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 331 DNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred CCeeEEEecccccccceeeeeehccCccc
Confidence 8888888887774 677888888877664
No 414
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.90 E-value=4e-24 Score=226.79 Aligned_cols=267 Identities=25% Similarity=0.348 Sum_probs=197.9
Q ss_pred HHHhhCCCcccceeeecCceEEEEEEec----CCeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEEEecCC
Q 001562 770 VVRATGNFSIRNLIGTGGFGSTYKAELV----PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEA 844 (1052)
Q Consensus 770 ~~~~~~~~~~~~~Lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 844 (1052)
.....+.|...++||+|.|++||+|... ..+.||+|.+..... ..++.+|++++..+ .+.||+++.+++...+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 3344567889999999999999999443 468899998865543 36789999999999 5999999999999999
Q ss_pred eEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECC-CCcEEEEecccc
Q 001562 845 EMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDE-ELNAYLSDFGLA 923 (1052)
Q Consensus 845 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~-~~~~kl~Dfgla 923 (1052)
.+.+|+||++.....++... ++..++..+++.+..||+++|.. |||||||||.|++.+. .+.-.|+|||+|
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA 180 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLA 180 (418)
T ss_pred eeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhH
Confidence 99999999999999988854 66888999999999999999999 9999999999999975 466899999999
Q ss_pred cccccc------cc-------------------------------------ccccCccccccccccccccCCC-CCchhH
Q 001562 924 RLLEVS------ET-------------------------------------HATTDVAGTFGYVAPEYATTCR-VSDKAD 959 (1052)
Q Consensus 924 ~~~~~~------~~-------------------------------------~~~~~~~g~~~y~aPE~~~~~~-~~~~sD 959 (1052)
...... .. .......||++|.|||++.... -++++|
T Consensus 181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD 260 (418)
T KOG1167|consen 181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID 260 (418)
T ss_pred HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence 832100 00 0011346999999999987644 578999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCcccCCCCcchHH------HHHHHHHhCC--ccc---------------ccc-chhhc-C
Q 001562 960 VYSFGVVLLELISGKRSLDPSFSEYGNGFNIVS------WAKLLIKEGR--SSE---------------LFL-PELWE-A 1014 (1052)
Q Consensus 960 v~slG~il~elltg~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~--~~~---------------~~~-~~l~~-~ 1014 (1052)
|||.|||+.-+++++.||.....+......... +.+.....|. ..+ .++ ..+.+ .
T Consensus 261 iws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~ 340 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSR 340 (418)
T ss_pred eeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccc
Confidence 999999999999999999765444222222111 1111111222 000 000 00000 0
Q ss_pred C--------CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1015 G--------PQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1015 ~--------~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. ....+..+.+++++|+..||.+|.|++|.++
T Consensus 341 q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 341 QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 0 1112336789999999999999999999875
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=1.7e-22 Score=260.71 Aligned_cols=178 Identities=20% Similarity=0.198 Sum_probs=100.4
Q ss_pred hhhhCCCCCCeeEecCCC------ceecCCCCccCCC-CccEEEccCccccccCCccccCcCcCCeEecccccccccCCc
Q 001562 117 ASIAKLTELRTLSVPHNS------FSGEIPAGVGELR-LLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPR 189 (1052)
Q Consensus 117 ~~l~~l~~L~~L~L~~n~------l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 189 (1052)
.++..+++|+.|.+..+. +...+|..|..++ +|+.|++.+|.+. .+|..| ...+|+.|+|++|++. .+|.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccc
Confidence 345666666666665442 3334555555553 3666666666665 555555 3566666666666665 5566
Q ss_pred cccCCCCCcEEEccCCcccCccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCC
Q 001562 190 GLIGNGELSVIDMSSNRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISE 269 (1052)
Q Consensus 190 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 269 (1052)
.+..+++|+.|+|++|...+.+| .++.+++|++|+|++|.....+|..++++++|+.|++++|..-+.+|..+ ++++
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip--~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~s 705 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIP--DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKS 705 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCC--ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCC
Confidence 66666666666666554333333 24555666666666655444566666666666666666654333555544 5566
Q ss_pred CCEEEccCCCCCCCCCcccccCCCCCeeecccCc
Q 001562 270 LKVLDVSRNSLTDRIPVELADCSKLSVLVLTNID 303 (1052)
Q Consensus 270 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~ 303 (1052)
|+.|++++|.....+|.. ..+|+.|++++|.
T Consensus 706 L~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~ 736 (1153)
T PLN03210 706 LYRLNLSGCSRLKSFPDI---STNISWLDLDETA 736 (1153)
T ss_pred CCEEeCCCCCCccccccc---cCCcCeeecCCCc
Confidence 666666666544444432 2345555555543
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=2.4e-22 Score=259.29 Aligned_cols=127 Identities=20% Similarity=0.256 Sum_probs=103.9
Q ss_pred CCCceEEEccCcccccccccccCCCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCCccCCcCchhhcCCcCCcEEE
Q 001562 531 CVQLVEFEAANNQISGSIAAGVGKLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGNNLTGEIPSQFGHLISLVVLD 610 (1052)
Q Consensus 531 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 610 (1052)
.++|+.|++++|...+.+|..++++++|+.|+|++|..-+.+|..+ ++++|+.|+|++|..-..+|.. ..+|++|+
T Consensus 777 ~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~ 852 (1153)
T PLN03210 777 SPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLN 852 (1153)
T ss_pred cccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeE
Confidence 4578889999988777889899999999999999886444777666 7899999999998655456653 36789999
Q ss_pred cCCCCCCCCCcchhcccccccceeccCC-cCCCCCCcccccccccCeEecccCc
Q 001562 611 LSHNALTGSIPASLTKATKLESLFLAHN-RLSGEIPVSFSTLVNLSALDLSFNN 663 (1052)
Q Consensus 611 l~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~N~ 663 (1052)
|++|.|+ .+|.++..+++|+.|+|++| ++. .+|..+..+++|+.+++++|.
T Consensus 853 Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 853 LSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 9999998 68889999999999999984 565 577788889999999998874
No 417
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=8.1e-26 Score=235.78 Aligned_cols=141 Identities=23% Similarity=0.261 Sum_probs=119.8
Q ss_pred cCCCCccCCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCccccCCCCCcEEEccC-CcccCccccCCC
Q 001562 138 EIPAGVGELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGNGELSVIDMSS-NRLSGGLAIDSS 216 (1052)
Q Consensus 138 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~ 216 (1052)
++|..+- ..-..++|..|+|+.+.|.+|+.+++|+.||||+|.|+.+-|++|.++.+|..|.+.+ |+|+. ++.+.|
T Consensus 60 eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~-l~k~~F 136 (498)
T KOG4237|consen 60 EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITD-LPKGAF 136 (498)
T ss_pred cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhh-hhhhHh
Confidence 4554442 3467899999999988889999999999999999999999999999999988877766 88886 888889
Q ss_pred cccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEEEccCCCCC
Q 001562 217 SECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVLDVSRNSLT 281 (1052)
Q Consensus 217 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 281 (1052)
..+.+|+.|.+.-|++.-.....|..+++|..|.+.+|.+...--..|..+..++.+.+..|.+.
T Consensus 137 ~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~i 201 (498)
T KOG4237|consen 137 GGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFI 201 (498)
T ss_pred hhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccc
Confidence 99999999999999998877788899999999999999988444448888889999999888853
No 418
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=1.3e-23 Score=263.58 Aligned_cols=195 Identities=17% Similarity=0.199 Sum_probs=138.8
Q ss_pred cCCc-CceeeEEEEE-------ecCCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 001562 827 RIRH-KNLVTLIGYY-------VGEAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIV 898 (1052)
Q Consensus 827 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ii 898 (1052)
.++| +||++++++| .+...++.++|++ +++|.++++.. ...+++.++..++.||++|++|||++ ||+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQ---GIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 3445 5777788876 2334678888988 67999999754 35689999999999999999999999 999
Q ss_pred ecCCCCCCEEECCC-------------------CcEEEEecccccccccccc---------------ccccCcccccccc
Q 001562 899 HRDIKPSNILLDEE-------------------LNAYLSDFGLARLLEVSET---------------HATTDVAGTFGYV 944 (1052)
Q Consensus 899 HrDik~~Nill~~~-------------------~~~kl~Dfgla~~~~~~~~---------------~~~~~~~g~~~y~ 944 (1052)
||||||+|||++.. +.+|++|||+++....... .......||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 99999999999654 4456666666653211000 0011135788899
Q ss_pred ccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHH
Q 001562 945 APEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMM 1024 (1052)
Q Consensus 945 aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 1024 (1052)
|||++.+..++.++|||||||++|||++|.+|+.... ........ .. +.+.. ........
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~----------~~~~~~~~-~~----~~~~~-----~~~~~~~~ 242 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS----------RTMSSLRH-RV----LPPQI-----LLNWPKEA 242 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH----------HHHHHHHH-hh----cChhh-----hhcCHHHH
Confidence 9999999999999999999999999999887764210 11111111 10 01111 11122356
Q ss_pred HHHHHcccCCCCCCCCHHHHHH
Q 001562 1025 RLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1025 ~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.++.+||+++|.+||++.|+++
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhh
Confidence 7888999999999999999975
No 419
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.88 E-value=2.1e-22 Score=205.16 Aligned_cols=166 Identities=17% Similarity=0.203 Sum_probs=126.5
Q ss_pred CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccccccc
Q 001562 856 GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATT 935 (1052)
Q Consensus 856 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 935 (1052)
|+|.++++.+. ..+++.++..++.|++.|++|||++ + ||+||+++.++.+++ ||.+.......
T Consensus 1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~----- 63 (176)
T smart00750 1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ----- 63 (176)
T ss_pred CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc-----
Confidence 68999998653 5699999999999999999999998 5 999999999999999 99988654321
Q ss_pred CccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCC
Q 001562 936 DVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAG 1015 (1052)
Q Consensus 936 ~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1015 (1052)
..|++.|||||++.+..++.++|||||||++|||+||+.||..... .....+............+ ...
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~----~~~ 131 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE-------LSAILEILLNGMPADDPRD----RSN 131 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch-------hcHHHHHHHHHhccCCccc----ccc
Confidence 2578999999999999999999999999999999999999864321 1122222221111110000 011
Q ss_pred CHHHHH--HHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 1016 PQENLL--GMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 1016 ~~~~~~--~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
+..... .+.+++.+||+.+|++||++.|+++.+..
T Consensus 132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 132 LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 122222 58999999999999999999999988754
No 420
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=2.9e-22 Score=238.97 Aligned_cols=121 Identities=31% Similarity=0.355 Sum_probs=77.1
Q ss_pred CceEEEccCcccccccccccCCCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCCccCCcCchhhcCCcCCcEEEcC
Q 001562 533 QLVEFEAANNQISGSIAAGVGKLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGNNLTGEIPSQFGHLISLVVLDLS 612 (1052)
Q Consensus 533 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 612 (1052)
+|++|++++|+|++ +|.. ..+|+.|++++|+|+ .+|.. ..+|+.|+|++|+|+ .+|.. .++|+.|+++
T Consensus 343 ~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS 410 (788)
T PRK15387 343 GLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLT-SLPVL---PSELKELMVS 410 (788)
T ss_pred ccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCccc---ccccceEEecCCccc-CCCCc---ccCCCEEEcc
Confidence 45566666666663 2322 235666677777776 34532 245677777777777 34542 2467777777
Q ss_pred CCCCCCCCcchhcccccccceeccCCcCCCCCCcccccccccCeEecccCcCCCCCCc
Q 001562 613 HNALTGSIPASLTKATKLESLFLAHNRLSGEIPVSFSTLVNLSALDLSFNNLSGHIPH 670 (1052)
Q Consensus 613 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 670 (1052)
+|+|+ .+|..+ .+|+.|++++|+|+ .+|..+..+++|+.|+|++|+|+|.+|.
T Consensus 411 ~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 411 GNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred CCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 77777 456432 35677777777777 5677777777777777777777776554
No 421
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=3e-22 Score=238.86 Aligned_cols=82 Identities=27% Similarity=0.325 Sum_probs=41.3
Q ss_pred ceEEEccCcccccccccccCCCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCCccCCcCchhhcCCcCCcEEEcCC
Q 001562 534 LVEFEAANNQISGSIAAGVGKLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGNNLTGEIPSQFGHLISLVVLDLSH 613 (1052)
Q Consensus 534 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 613 (1052)
|+.|++++|+|++ +|.. .++|+.|++++|+|++ +|..+ .+|+.|+|++|+|+ .+|..++++++|+.|+|++
T Consensus 384 L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~ 454 (788)
T PRK15387 384 LKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 454 (788)
T ss_pred cceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCC
Confidence 4455555555553 2221 2345555666665552 34322 24455555555555 4555555555555555555
Q ss_pred CCCCCCCcchh
Q 001562 614 NALTGSIPASL 624 (1052)
Q Consensus 614 N~l~~~~p~~~ 624 (1052)
|+|++..|..+
T Consensus 455 N~Ls~~~~~~L 465 (788)
T PRK15387 455 NPLSERTLQAL 465 (788)
T ss_pred CCCCchHHHHH
Confidence 55555444443
No 422
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.87 E-value=1.2e-21 Score=235.61 Aligned_cols=191 Identities=17% Similarity=0.192 Sum_probs=93.1
Q ss_pred CCChhhHHHHHHHHHhccCCCCCcccC----cCCCCCCCCCCc----------------eEeecCCCceEEEEEcccCCC
Q 001562 44 SVPTTDSASLLSFKASISRDPSNLLAT----WNSSTDHCTWHG----------------VTCDHFTGRVTALRITGKATP 103 (1052)
Q Consensus 44 ~~~~~d~~all~~k~~~~~~p~~~l~~----W~~~~~~C~w~g----------------V~C~~~~~~v~~l~l~~~~~~ 103 (1052)
...++|.+.+++..+.+...+ .+.+ |+.++|+|.=.. |.|. ++.|+.+.+.|....
T Consensus 59 ~~~~~~~~~~~~~~~~l~~p~--~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~--~~~vt~l~~~g~~~~ 134 (754)
T PRK15370 59 TASPEEIKSKFECLRMLAFPA--YADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGG--GKSVTYTRVTESEQA 134 (754)
T ss_pred CCCHHHHHHHHHHHHHhcCCc--hhhccccccCCCCcccccCCcchhhheeeecCCceEEecC--CCccccccccccccc
Confidence 456889999999999996433 3445 999999995332 6675 466777766663211
Q ss_pred CCCCCccccc-ccc---hhhhCCCCCCeeEecCCC--ceecCCCCccCCCCccEEEccCccccccCCccccCcCcCCeEe
Q 001562 104 WPSKSSVISG-TLS---ASIAKLTELRTLSVPHNS--FSGEIPAGVGELRLLEVLELQGNNFSGKIPYQMSNLERLRVLN 177 (1052)
Q Consensus 104 ~~~~~~~l~g-~l~---~~l~~l~~L~~L~L~~n~--l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 177 (1052)
-. .+..-.. .-. .....-.... -..++ -...+.+++ ..+...|+++++.++ .+|..+. ++|+.|+
T Consensus 135 ~~-~~~~~~~~~~~~~w~~w~~~~~~~---~~~~r~~a~~r~~~Cl--~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~ 205 (754)
T PRK15370 135 SS-ASGSKDAVNYELIWSEWVKEAPAK---EAANREEAVQRMRDCL--KNNKTELRLKILGLT-TIPACIP--EQITTLI 205 (754)
T ss_pred cc-CCCCCChhhHHHHHHHHHhcCCCC---ccccHHHHHHHHHhhc--ccCceEEEeCCCCcC-cCCcccc--cCCcEEE
Confidence 00 0000000 000 0000000000 00000 000011111 134567888888777 5666553 4678888
Q ss_pred cccccccccCCccccCCCCCcEEEccCCcccCccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccc
Q 001562 178 LSFNSFSGEVPRGLIGNGELSVIDMSSNRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILE 257 (1052)
Q Consensus 178 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 257 (1052)
|++|+|+ .+|..+. ++|+.|++++|+|+. +|... ..+|+.|+|++|.++ .+|..+. ++|+.|++++|+|+
T Consensus 206 Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lts-LP~~l---~~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~ 275 (754)
T PRK15370 206 LDNNELK-SLPENLQ--GNIKTLYANSNQLTS-IPATL---PDTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS 275 (754)
T ss_pred ecCCCCC-cCChhhc--cCCCEEECCCCcccc-CChhh---hccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC
Confidence 8888887 5565443 355555555555543 22111 123444555555444 2333322 23444444444444
No 423
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=5.4e-21 Score=213.66 Aligned_cols=257 Identities=22% Similarity=0.262 Sum_probs=192.6
Q ss_pred CCcccceeeecCceEEEEEEecC--CeEEEEEEeccCchhhHHHHHHHHHHhccCCc----CceeeEEEEE-ecCCeEEE
Q 001562 776 NFSIRNLIGTGGFGSTYKAELVP--GYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRH----KNLVTLIGYY-VGEAEMFL 848 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l 848 (1052)
+|.+.+.||+|+||.||.|.... ...+|+|............+..|..++..+.. +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 79999999999999999996554 35788887765433332367888888888863 6888999998 47778899
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC-----CcEEEEecccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE-----LNAYLSDFGLA 923 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~-----~~~kl~Dfgla 923 (1052)
||+.+ |.+|.++........++..++..++.|++.+++++|+. |++||||||.|+++... ..+.+.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99988 99999988777667899999999999999999999999 99999999999999865 35899999999
Q ss_pred cccc--cccc-----c-c-ccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHH
Q 001562 924 RLLE--VSET-----H-A-TTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWA 994 (1052)
Q Consensus 924 ~~~~--~~~~-----~-~-~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 994 (1052)
+... .... . . .....||.+|+++++..+...+++.|+||+++++.|+..|..||...... .......
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~----~~~~~~~ 250 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMT----DLKSKFE 250 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccccc----chHHHHH
Confidence 8332 1111 1 1 22356999999999999999999999999999999999999998532211 1111111
Q ss_pred HHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhc
Q 001562 995 KLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQ 1050 (1052)
Q Consensus 995 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~ 1050 (1052)
+.. ...... . ..... +..+.++...+-..+..++|....+...+++
T Consensus 251 ~~~-~~~~~~----~--~~~~~---~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~ 296 (322)
T KOG1164|consen 251 KDP-RKLLTD----R--FGDLK---PEEFAKILEYIDSLDYEDKPDYEKLAELLKD 296 (322)
T ss_pred HHh-hhhccc----c--ccCCC---hHHHHHHHHHhhccCCcCCCCHHHHHHHHHH
Confidence 111 111000 0 11112 2335555555666888999999988887654
No 424
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=3.7e-21 Score=188.22 Aligned_cols=259 Identities=22% Similarity=0.285 Sum_probs=198.2
Q ss_pred hhCCCcccceeeecCceEEEEEE-ecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCc-CceeeEEEEEecCCeEEEEE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAE-LVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRH-KNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 850 (1052)
..+.|.+.++||.|+||.+|.|. ..+|+.||+|.-+..... .+...|..+.+.+++ ..|..+..+..+...-.+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 34689999999999999999994 567999999987654433 567788899998864 56777778888888889999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC---CcEEEEecccccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE---LNAYLSDFGLARLLE 927 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~---~~~kl~Dfgla~~~~ 927 (1052)
|.. |.+|.+.+.-.. ..++..+++-.|-|++.-++|+|.+ +++||||||+|+++.-+ ..+.++|||+|+.+.
T Consensus 91 dLL-GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred ecc-CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 999 889999876543 6789999999999999999999999 99999999999999644 468999999999875
Q ss_pred ccc------cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhC
Q 001562 928 VSE------THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEG 1001 (1052)
Q Consensus 928 ~~~------~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1001 (1052)
... +.......||.+|.+-.+..+..-+.+.|+-|+|+++..+-.|..||.+-..... .+-. ..+.+.
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk-----~QKy-EkI~Ek 239 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK-----KQKY-EKISEK 239 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH-----HHHH-HHHHHh
Confidence 332 2234456799999999999988889999999999999999999999986433310 0111 112222
Q ss_pred CccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 1002 RSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 1002 ~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
+... ....+....|.+ +.-.+..|-...-++-|+..-+.+.++
T Consensus 240 K~s~-~ie~LC~G~P~E----F~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 240 KMST-PIEVLCKGFPAE----FAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred hcCC-CHHHHhCCCcHH----HHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 2211 122334444443 777778888888888888776666554
No 425
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=2.8e-21 Score=214.07 Aligned_cols=168 Identities=21% Similarity=0.206 Sum_probs=130.5
Q ss_pred hHHHhhCCCcccceeeecCceEEEEEEec--CCeEEEEEEeccC-----chhhHHHHHHHHHHhccCCcCceee-EEEEE
Q 001562 769 NVVRATGNFSIRNLIGTGGFGSTYKAELV--PGYLVAVKKLSIG-----RFQGIQQFDAEIGTLGRIRHKNLVT-LIGYY 840 (1052)
Q Consensus 769 ~~~~~~~~~~~~~~Lg~G~~g~V~~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~ 840 (1052)
......++|++.++||+|+||+||+|.+. +++.||||+.... .....+.+.+|++++++++|+|+++ +++
T Consensus 12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~-- 89 (365)
T PRK09188 12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA-- 89 (365)
T ss_pred ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE--
Confidence 34455678999999999999999999764 5778899986532 1223466899999999999999985 443
Q ss_pred ecCCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCEEECCCCcEEEEe
Q 001562 841 VGEAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDI-KPSNILLDEELNAYLSD 919 (1052)
Q Consensus 841 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDi-k~~Nill~~~~~~kl~D 919 (1052)
.+..|+||||+++++|... .. .. ...++.++++|++|||++ ||+|||| ||+||+++.++.+||+|
T Consensus 90 --~~~~~LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiD 155 (365)
T PRK09188 90 --TGKDGLVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVID 155 (365)
T ss_pred --cCCcEEEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEE
Confidence 2457999999999999632 11 11 146788999999999999 9999999 99999999999999999
Q ss_pred ccccccccccccc-------cccCccccccccccccccCC
Q 001562 920 FGLARLLEVSETH-------ATTDVAGTFGYVAPEYATTC 952 (1052)
Q Consensus 920 fgla~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~ 952 (1052)
||+|+.+...... ......+++.|+|||.+...
T Consensus 156 FGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 156 FQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9999977533211 11245678889999988643
No 426
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=2.7e-20 Score=190.49 Aligned_cols=259 Identities=19% Similarity=0.226 Sum_probs=196.8
Q ss_pred hhCCCcccceeeecCceEEEEEE-ecCCeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEEEEE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAE-LVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
..-.|++.++||+|.||+++.|+ +-++++||||.-.... +..++..|....+.+ ..++|..++-+..++..-.+|+
T Consensus 26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred ecccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 34479999999999999999994 5579999999654332 336778899988888 5789999998888888889999
Q ss_pred eecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC-----CcEEEEecccccc
Q 001562 851 NFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE-----LNAYLSDFGLARL 925 (1052)
Q Consensus 851 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~-----~~~kl~Dfgla~~ 925 (1052)
|.+ |.||.|..+-. +..++..++..+|.|++.-++|+|++ ..|.|||||+|+||... ..+.|+|||+|+.
T Consensus 104 dLL-GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hhh-CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 999 89999988765 47899999999999999999999999 99999999999999643 3489999999998
Q ss_pred cccccc------ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 001562 926 LEVSET------HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIK 999 (1052)
Q Consensus 926 ~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
+....+ .......||.+||+=....+++-+.+.|+-|+|-++.+.+.|..||.+-..+. ..+-. ..+.
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~t-----nK~kY-eKIG 252 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADT-----NKEKY-EKIG 252 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcc-----hHHHH-HHhc
Confidence 854432 23345679999999999999999999999999999999999999998543331 11111 1122
Q ss_pred hCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 001562 1000 EGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLK 1049 (1052)
Q Consensus 1000 ~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~ 1049 (1052)
+.+.... ..++.... +.++..-+.-.-..+-.+-|+.+-+...+.
T Consensus 253 e~Kr~T~-i~~Lc~g~----P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~ 297 (449)
T KOG1165|consen 253 ETKRSTP-IEVLCEGF----PEEFATYLRYVRRLDFFETPDYDYLRKLFD 297 (449)
T ss_pred cccccCC-HHHHHhcC----HHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence 2221111 12233333 334666666666667777787766655543
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=8.9e-21 Score=224.27 Aligned_cols=252 Identities=17% Similarity=0.167 Sum_probs=187.2
Q ss_pred ccceeeecCceEEEEEEec-CCeEEEEEEec----cCc-hhh-HHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 779 IRNLIGTGGFGSTYKAELV-PGYLVAVKKLS----IGR-FQG-IQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 779 ~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~----~~~-~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
..+++|.|++|.|+.+... .....+.|.+. ... ... ...+..|+-+-..++|+|++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4578999999988877433 33334444433 111 111 1225678888888999999888877777666666699
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
|+++ +|..++... ..++..++..+++|+..|+.|+|+. ||.|||+|++|++++.+|.+||+|||.+..+.....
T Consensus 402 ~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred cccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 9998 999998764 3588899999999999999999999 999999999999999999999999999987754433
Q ss_pred ---ccccCccccccccccccccCCCCCc-hhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccc
Q 001562 932 ---HATTDVAGTFGYVAPEYATTCRVSD-KADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELF 1007 (1052)
Q Consensus 932 ---~~~~~~~g~~~y~aPE~~~~~~~~~-~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1052)
......+|+..|+|||++.+..|.+ ..||||.|+++..|.+|+.||.......... .........-
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~----------~~~~~~~~~~ 545 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF----------KTNNYSDQRN 545 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch----------hhhccccccc
Confidence 4566788999999999999999986 4699999999999999999997544332110 0000000000
Q ss_pred cchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1008 LPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1008 ~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
...-........+...+.++.+|+++||.+|.|+++|++
T Consensus 546 ~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 546 IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 000001112344556889999999999999999999986
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.82 E-value=9.7e-20 Score=219.31 Aligned_cols=54 Identities=37% Similarity=0.473 Sum_probs=29.9
Q ss_pred CCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEEEccCCCCC
Q 001562 222 LTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVLDVSRNSLT 281 (1052)
Q Consensus 222 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 281 (1052)
...|+++++.++. +|..+. ++|+.|+|++|+|+ .+|..+. ++|++|++++|+++
T Consensus 180 ~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt 233 (754)
T PRK15370 180 KTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT 233 (754)
T ss_pred ceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc
Confidence 4556666666653 444332 35666666666666 3444432 35666666666665
No 429
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.81 E-value=1.7e-18 Score=195.90 Aligned_cols=259 Identities=30% Similarity=0.431 Sum_probs=198.1
Q ss_pred CcccceeeecCceEEEEEEecCCeEEEEEEeccCchh---hHHHHHHHHHHhccCCcC-ceeeEEEEEecCCeEEEEEee
Q 001562 777 FSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQ---GIQQFDAEIGTLGRIRHK-NLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 852 (1052)
|.+.+.||.|+||.||++... ..+++|.+...... ....+.+|+..++.+.|+ +++++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 677889999999999999776 77899988655433 367889999999999988 799999999877778999999
Q ss_pred cCCCCHHHHHhhccC-CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC-cEEEEeccccccccccc
Q 001562 853 LSGGNLETFIHKKSG-KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL-NAYLSDFGLARLLEVSE 930 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~-~~kl~Dfgla~~~~~~~ 930 (1052)
+.++++.+++..... ..+.......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|||.+.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977765432 2688999999999999999999999 999999999999999998 69999999998654333
Q ss_pred cc-----cccCccccccccccccccC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCC
Q 001562 931 TH-----ATTDVAGTFGYVAPEYATT---CRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGR 1002 (1052)
Q Consensus 931 ~~-----~~~~~~g~~~y~aPE~~~~---~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
.. ......|+..|+|||.+.+ ..+....|+|++|++++++++|..||...... ...............
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~ 232 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS----SATSQTLKIILELPT 232 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc----ccHHHHHHHHHhcCC
Confidence 22 3456689999999999988 57888999999999999999999996633221 011122222222221
Q ss_pred ccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 1003 SSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1003 ~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
. .................+.+++..|+..+|..|.++.+...
T Consensus 233 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 233 P--SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred c--ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 1 00001111111222346889999999999999999887654
No 430
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=2.5e-20 Score=217.36 Aligned_cols=249 Identities=22% Similarity=0.241 Sum_probs=183.6
Q ss_pred CCcccceeeecCceEEEEEEecCCeEEEEEEeccCc-hhhHHHHH---HHHHHhccCCcCceeeEEEEEecCCeEEEEEe
Q 001562 776 NFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGR-FQGIQQFD---AEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYN 851 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~---~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 851 (1052)
++...+.||.+.|=+|.+|+++.|. |+||++.... .-..+.|+ +|++ ...++|||++++.-+-..+...|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5777899999999999999998887 9999986654 22334443 4444 555689999999888777788899999
Q ss_pred ecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccc-
Q 001562 852 FLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSE- 930 (1052)
Q Consensus 852 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~- 930 (1052)
|+ .-+|+|.+..++ .+..-+.+.|+.|++.|+..+|+. ||+|||||.+|||++.-..+.|+||..-+...-.+
T Consensus 102 yv-khnLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 102 YV-KHNLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HH-hhhhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 99 459999998764 577788889999999999999999 99999999999999999999999998766442111
Q ss_pred -cc----cccCccccccccccccccCCC-----------CCchhHHHHHHHHHHHHHh-CCCCCCCCcccCCCCcchHHH
Q 001562 931 -TH----ATTDVAGTFGYVAPEYATTCR-----------VSDKADVYSFGVVLLELIS-GKRSLDPSFSEYGNGFNIVSW 993 (1052)
Q Consensus 931 -~~----~~~~~~g~~~y~aPE~~~~~~-----------~~~~sDv~slG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 993 (1052)
+. .......-..|.|||.+.... .+++.||||+||++.|+++ |++||.-
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-------------- 241 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-------------- 241 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH--------------
Confidence 11 111122334799999875411 4678899999999999999 5777751
Q ss_pred HHHHHHhCCccccccchhh-cCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 994 AKLLIKEGRSSELFLPELW-EAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 994 ~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
.++....... ..+++.. ...+ ...+++++..|++.||++|.+++++++.-+.+
T Consensus 242 -SQL~aYr~~~-~~~~e~~Le~Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 242 -SQLLAYRSGN-ADDPEQLLEKIE---DVSLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred -HHHHhHhccC-ccCHHHHHHhCc---CccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 1112111111 1122111 1111 11488999999999999999999999876543
No 431
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.78 E-value=3.1e-19 Score=183.31 Aligned_cols=171 Identities=13% Similarity=0.134 Sum_probs=132.8
Q ss_pred hhCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHH---------HHHHHHHHhccCCcCceeeEEEEEecC
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQ---------QFDAEIGTLGRIRHKNLVTLIGYYVGE 843 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~---------~~~~E~~~l~~l~h~niv~l~~~~~~~ 843 (1052)
..++|+..+++|.|+||.||.++. ++..+|+|.+......... .+.+|++.+.++.|+++..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 467899999999999999999866 4778999999654332222 268899999999999999998886532
Q ss_pred --------CeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcE
Q 001562 844 --------AEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNA 915 (1052)
Q Consensus 844 --------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~ 915 (1052)
+..++||||++|.+|.++.. +++ ....+++.++..+|+. |++|||++|.||+++.++ +
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-E
Confidence 35799999999999988732 222 2456999999999999 999999999999999988 9
Q ss_pred EEEeccccccccccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHH
Q 001562 916 YLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELI 971 (1052)
Q Consensus 916 kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ell 971 (1052)
+++|||........... ........+..++|+|++|+.+....
T Consensus 174 ~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99999988754211100 01333344567899999999887664
No 432
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.78 E-value=9.3e-19 Score=196.77 Aligned_cols=215 Identities=30% Similarity=0.433 Sum_probs=167.8
Q ss_pred hccCCcCceeeEEEEEecCCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCe-eecCCC
Q 001562 825 LGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRI-VHRDIK 903 (1052)
Q Consensus 825 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~i-iHrDik 903 (1052)
|+.+.|.|+.+++|.+.++...+.|.+|+..|+|.|.+... ...+++.....+.++|+.|++|+|.. .| .|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeec
Confidence 46789999999999999999999999999999999999874 37789999999999999999999988 55 899999
Q ss_pred CCCEEECCCCcEEEEecccccccccc-ccccccCccccccccccccccCCC-------CCchhHHHHHHHHHHHHHhCCC
Q 001562 904 PSNILLDEELNAYLSDFGLARLLEVS-ETHATTDVAGTFGYVAPEYATTCR-------VSDKADVYSFGVVLLELISGKR 975 (1052)
Q Consensus 904 ~~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~~~~~g~~~y~aPE~~~~~~-------~~~~sDv~slG~il~elltg~~ 975 (1052)
+.|++++....+|++|||+....... .........-..-|.|||.+.+.. .+.+.||||||++++|+++.+.
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 99999999999999999998866421 111222223445799999988742 3567899999999999999999
Q ss_pred CCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhcc
Q 001562 976 SLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 976 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L~~i 1051 (1052)
||+........ .+.+..+.. .....+.|.++... +....+..++.+||.++|++||+++++...++.+
T Consensus 157 ~~~~~~~~~~~----~eii~~~~~--~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 157 PFDLRNLVEDP----DEIILRVKK--GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred ccccccccCCh----HHHHHHHHh--cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 99854433222 233333222 23334555555332 3344689999999999999999999998887653
No 433
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.77 E-value=5.2e-18 Score=179.62 Aligned_cols=231 Identities=19% Similarity=0.289 Sum_probs=152.1
Q ss_pred CcccceeeecCceEEEEEEec-CCeEEEEEEeccCch---hhHHHHHHHHHHhccCC----------cCceeeEEEEEe-
Q 001562 777 FSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRF---QGIQQFDAEIGTLGRIR----------HKNLVTLIGYYV- 841 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~----------h~niv~l~~~~~- 841 (1052)
+...+.||.|+++.||.++.. +|+++|+|++..... ...+++++|.-....+. |-.++--++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 456789999999999999665 589999998865432 23567777776666542 212222222211
Q ss_pred -----------cCC-----eEEEEEeecCCCCHHHHHhh---ccC--CCccHHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 001562 842 -----------GEA-----EMFLVYNFLSGGNLETFIHK---KSG--KKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHR 900 (1052)
Q Consensus 842 -----------~~~-----~~~lv~e~~~~gsL~~~l~~---~~~--~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHr 900 (1052)
+.. ..+++|+-+ .++|.+++.. ... ..+....+..+..|+++.+++||.. |++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 111 236677777 6788888643 221 1234455667779999999999999 99999
Q ss_pred CCCCCCEEECCCCcEEEEeccccccccccccccccCccccccccccccccC--------CCCCchhHHHHHHHHHHHHHh
Q 001562 901 DIKPSNILLDEELNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATT--------CRVSDKADVYSFGVVLLELIS 972 (1052)
Q Consensus 901 Dik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~sDv~slG~il~ellt 972 (1052)
||+|+|++++.+|.++|+||+.....+..... ...+..|.+||.... -.++.+.|.|++|+++|.|++
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEEG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceeec----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 99999999999999999999988765432211 234577999997643 246789999999999999999
Q ss_pred CCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCC
Q 001562 973 GKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTR 1038 (1052)
Q Consensus 973 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~R 1038 (1052)
|..||+...+...... .+..+. +.++.+..||..+++++|++|
T Consensus 246 ~~lPf~~~~~~~~~~~----------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPEW----------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSGG----------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccccccc----------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999986544322111 334555 778889999999999999988
No 434
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.77 E-value=1.2e-18 Score=178.00 Aligned_cols=139 Identities=19% Similarity=0.210 Sum_probs=108.3
Q ss_pred cceeeecCceEEEEEEecCCeEEEEEEeccCchh--h-------H-----------------HHHHHHHHHhccCCcCce
Q 001562 780 RNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQ--G-------I-----------------QQFDAEIGTLGRIRHKNL 833 (1052)
Q Consensus 780 ~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~E~~~l~~l~h~ni 833 (1052)
.+.||+|+||.||+|...+|+.||||+++..... . . .....|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999998778999999998654211 0 0 122349999999988776
Q ss_pred eeEEEEEecCCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHH-HhcCCCCeeecCCCCCCEEECCC
Q 001562 834 VTLIGYYVGEAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYL-HYSCVPRIVHRDIKPSNILLDEE 912 (1052)
Q Consensus 834 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~L-h~~~~~~iiHrDik~~Nill~~~ 912 (1052)
.....+.. ...++||||++++++....... ..++..++..++.|++.++.|+ |+. ||+||||||+||++++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~~- 153 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYHD- 153 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEEC-
Confidence 43332222 2348999999887776543222 4688999999999999999999 688 9999999999999984
Q ss_pred CcEEEEeccccccc
Q 001562 913 LNAYLSDFGLARLL 926 (1052)
Q Consensus 913 ~~~kl~Dfgla~~~ 926 (1052)
+.++|+|||+|...
T Consensus 154 ~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 GKLYIIDVSQSVEH 167 (190)
T ss_pred CcEEEEEccccccC
Confidence 78999999999754
No 435
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=1.2e-17 Score=167.34 Aligned_cols=188 Identities=15% Similarity=0.089 Sum_probs=140.6
Q ss_pred cccceeeecCceEEEEEEecCCeEEEEEEeccCchhh----HHHHHHHHHHhccCC-cCceeeEEEEEecCCeEEEEEee
Q 001562 778 SIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQG----IQQFDAEIGTLGRIR-HKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 778 ~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
.+...|++|+||+||.+.- ++.+++.+.+....... ...+.+|+++++++. |+++.+++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3567899999999998865 57888877776543311 225789999999995 5788888886 346999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCEEECCCCcEEEEecccccccccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDI-KPSNILLDEELNAYLSDFGLARLLEVSET 931 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDi-k~~Nill~~~~~~kl~Dfgla~~~~~~~~ 931 (1052)
+.|.+|.+.... . ...++.|++++++++|+. ||+|||| ||.||+++.++.++|+|||+|........
T Consensus 80 I~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 80 LAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred ecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 999998754321 1 134778999999999999 9999999 79999999999999999999986543221
Q ss_pred c----c--------ccCccccccccccccccCC-CCC-chhHHHHHHHHHHHHHhCCCCCCCCcc
Q 001562 932 H----A--------TTDVAGTFGYVAPEYATTC-RVS-DKADVYSFGVVLLELISGKRSLDPSFS 982 (1052)
Q Consensus 932 ~----~--------~~~~~g~~~y~aPE~~~~~-~~~-~~sDv~slG~il~elltg~~p~~~~~~ 982 (1052)
. . ......++.|++|+...-- ..+ .+.+-++-|+.+|.++|++.+...+.+
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 0 0 0112246677777754332 233 567899999999999999988764433
No 436
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.75 E-value=2.5e-20 Score=172.94 Aligned_cols=168 Identities=34% Similarity=0.541 Sum_probs=154.4
Q ss_pred hhCCCCCCeeEecCCCceecCCCCccCCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCccccCCCCCc
Q 001562 119 IAKLTELRTLSVPHNSFSGEIPAGVGELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGNGELS 198 (1052)
Q Consensus 119 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 198 (1052)
+..+.+.+.|.|++|.++ .+|+.+..+.+|+.|++++|++. .+|.+++.+++|+.|+++-|++. ..|.+|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 556778899999999999 88999999999999999999999 89999999999999999999998 9999999999999
Q ss_pred EEEccCCcccCccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEEEccCC
Q 001562 199 VIDMSSNRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVLDVSRN 278 (1052)
Q Consensus 199 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 278 (1052)
.|||++|++....-+..|..++.|..|+|++|.+. .+|..++++++|+.|.+.+|.+- .+|.+++.+++|+.|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 99999999986555566777889999999999997 78999999999999999999998 79999999999999999999
Q ss_pred CCCCCCCcccccCC
Q 001562 279 SLTDRIPVELADCS 292 (1052)
Q Consensus 279 ~l~~~~p~~l~~l~ 292 (1052)
+++ .+|.+++++.
T Consensus 184 rl~-vlppel~~l~ 196 (264)
T KOG0617|consen 184 RLT-VLPPELANLD 196 (264)
T ss_pred eee-ecChhhhhhh
Confidence 998 6787777654
No 437
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.75 E-value=1.1e-17 Score=171.80 Aligned_cols=139 Identities=19% Similarity=0.226 Sum_probs=110.7
Q ss_pred cceeeecCceEEEEEEecCCeEEEEEEeccCchh---------------------h-----HHHHHHHHHHhccCCcCce
Q 001562 780 RNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQ---------------------G-----IQQFDAEIGTLGRIRHKNL 833 (1052)
Q Consensus 780 ~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~h~ni 833 (1052)
.+.||+|++|.||+|...+|+.||||++...... . ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5789999999999998778999999998754211 0 1224578999999999987
Q ss_pred eeEEEEEecCCeEEEEEeecCCCCHHHH-HhhccCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEECC
Q 001562 834 VTLIGYYVGEAEMFLVYNFLSGGNLETF-IHKKSGKKIQWSVIHKIAIDIAQALAYLHY-SCVPRIVHRDIKPSNILLDE 911 (1052)
Q Consensus 834 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~iiHrDik~~Nill~~ 911 (1052)
.....+... ..++||||++++++... +.. ..++..+..+++.|++.++.++|+ . ||+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-
Confidence 544443332 24899999988755443 332 357788999999999999999999 8 999999999999999
Q ss_pred CCcEEEEecccccccc
Q 001562 912 ELNAYLSDFGLARLLE 927 (1052)
Q Consensus 912 ~~~~kl~Dfgla~~~~ 927 (1052)
++.++|+|||++....
T Consensus 153 ~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCEEEEEcccceecC
Confidence 7899999999998654
No 438
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=5.5e-18 Score=177.36 Aligned_cols=193 Identities=21% Similarity=0.269 Sum_probs=136.8
Q ss_pred CcCceeeEEEEEec---------------------------CCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHH
Q 001562 829 RHKNLVTLIGYYVG---------------------------EAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAID 881 (1052)
Q Consensus 829 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 881 (1052)
+|||||++.++|.+ ....|+||..+ ..+|.+|+..+. .+.....-+..|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC---CchHHHHHHHHH
Confidence 59999999987753 23579999988 469999998764 566667778999
Q ss_pred HHHHHHHHHhcCCCCeeecCCCCCCEEEC--CC--CcEEEEeccccccccccc---ccc--ccCccccccccccccccCC
Q 001562 882 IAQALAYLHYSCVPRIVHRDIKPSNILLD--EE--LNAYLSDFGLARLLEVSE---THA--TTDVAGTFGYVAPEYATTC 952 (1052)
Q Consensus 882 i~~~l~~Lh~~~~~~iiHrDik~~Nill~--~~--~~~kl~Dfgla~~~~~~~---~~~--~~~~~g~~~y~aPE~~~~~ 952 (1052)
+++|+.|||.+ ||.|||+|++||++. +| ..+.|+|||.+---.... .+. .-..-|...-||||+....
T Consensus 350 lLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 99999999999 999999999999993 33 347899999775322211 111 1123466788999998653
Q ss_pred C------CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHH
Q 001562 953 R------VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRL 1026 (1052)
Q Consensus 953 ~------~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~L 1026 (1052)
+ ...|+|.|+.|.+.||+++...||+...+- ..+.. .+.+.-.|.+.+. ++..++++
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem---~L~~r----------~Yqe~qLPalp~~----vpp~~rql 489 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM---LLDTR----------TYQESQLPALPSR----VPPVARQL 489 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchh---eechh----------hhhhhhCCCCccc----CChHHHHH
Confidence 3 135899999999999999999999852111 00111 1112223333333 44458899
Q ss_pred HHHcccCCCCCCCCHHHHH
Q 001562 1027 ASTCTVETLSTRPSVKQVL 1045 (1052)
Q Consensus 1027 i~~cl~~dP~~RPs~~eil 1045 (1052)
+...++.||++|++..=..
T Consensus 490 V~~lL~r~pskRvsp~iAA 508 (598)
T KOG4158|consen 490 VFDLLKRDPSKRVSPNIAA 508 (598)
T ss_pred HHHHhcCCccccCCccHHH
Confidence 9999999999999865433
No 439
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.74 E-value=5.1e-20 Score=170.91 Aligned_cols=153 Identities=28% Similarity=0.411 Sum_probs=134.4
Q ss_pred hcCCCceEEEccCcccccccccccCCCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCCccC-CcCchhhcCCcCCc
Q 001562 529 LDCVQLVEFEAANNQISGSIAAGVGKLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGNNLT-GEIPSQFGHLISLV 607 (1052)
Q Consensus 529 ~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~ 607 (1052)
+.+.+|+.|++++|+|. ..|..++.+++|+.|+++-|++. ..|..|+.++.|+.|||.+|++. ..+|+.|..|..|+
T Consensus 53 a~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlr 130 (264)
T KOG0617|consen 53 AELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLR 130 (264)
T ss_pred HHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHH
Confidence 35678888888888888 77888899999999999999998 88999999999999999999986 35799999999999
Q ss_pred EEEcCCCCCCCCCcchhcccccccceeccCCcCCCCCCcccccccccCeEecccCcCCCCCCccccc------ccccccC
Q 001562 608 VLDLSHNALTGSIPASLTKATKLESLFLAHNRLSGEIPVSFSTLVNLSALDLSFNNLSGHIPHLQHL------DCIAFKG 681 (1052)
Q Consensus 608 ~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l------~~~~~~~ 681 (1052)
.|+|+.|.+. .+|..++++++|+.|.+.+|.+- ..|.+++.++.|+.|.+.+|+++-.+|.+..+ +...++.
T Consensus 131 alyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~vlppel~~l~l~~~k~v~r~E~ 208 (264)
T KOG0617|consen 131 ALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPELANLDLVGNKQVMRMEE 208 (264)
T ss_pred HHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceeeecChhhhhhhhhhhHHHHhhhh
Confidence 9999999998 88999999999999999999988 78999999999999999999999988887754 3456888
Q ss_pred Cccc
Q 001562 682 NKYL 685 (1052)
Q Consensus 682 n~~~ 685 (1052)
|||.
T Consensus 209 NPwv 212 (264)
T KOG0617|consen 209 NPWV 212 (264)
T ss_pred CCCC
Confidence 9885
No 440
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=2.7e-17 Score=197.39 Aligned_cols=197 Identities=23% Similarity=0.277 Sum_probs=159.9
Q ss_pred HHHhhCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCC---cCceeeEEEEEecCCeE
Q 001562 770 VVRATGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIR---HKNLVTLIGYYVGEAEM 846 (1052)
Q Consensus 770 ~~~~~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~ 846 (1052)
.....+.|.|.+.||+|+||+||+|...+|+.||+|+-+.....+ |.-=.+++.+++ -+.|+.+..++.-.+.-
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 344566799999999999999999988889999999877665432 222233444444 23455555555567778
Q ss_pred EEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEC-------CCCcEEEEe
Q 001562 847 FLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLD-------EELNAYLSD 919 (1052)
Q Consensus 847 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~-------~~~~~kl~D 919 (1052)
++|+||.+.|+|.+++.. .+..++.-++.++.|++..+++||.. +|||+||||+|+++. +...++|+|
T Consensus 770 ~lv~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred eeeeeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEe
Confidence 999999999999999984 36799999999999999999999999 999999999999994 234689999
Q ss_pred cccccccccc-ccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCC
Q 001562 920 FGLARLLEVS-ETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGK 974 (1052)
Q Consensus 920 fgla~~~~~~-~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~ 974 (1052)
||.+..+..- +.......++|-.+-.+|...|+.++.+.|-|.++.+++-|+.|+
T Consensus 845 fG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 845 FGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred cccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 9999866432 223455667889999999999999999999999999999999987
No 441
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.71 E-value=2.3e-18 Score=192.58 Aligned_cols=225 Identities=27% Similarity=0.322 Sum_probs=179.7
Q ss_pred eeeecCceEEEEEE----ecCCeEEEEEEeccCchhh--HHHHHHHHHHhccCC-cCceeeEEEEEecCCeEEEEEeecC
Q 001562 782 LIGTGGFGSTYKAE----LVPGYLVAVKKLSIGRFQG--IQQFDAEIGTLGRIR-HKNLVTLIGYYVGEAEMFLVYNFLS 854 (1052)
Q Consensus 782 ~Lg~G~~g~V~~~~----~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 854 (1052)
++|+|.||.|+.++ ...|.-+|.|+.+...... ......|..++...+ ||.+++++-.++.+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999873 3346778888776543221 124566888888886 9999999999999999999999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccc
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHAT 934 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 934 (1052)
+|.+...+... ..+++.....+...++-+++++|+. +|+|||+|++||+++.+|.+++.|||+++..-..+..
T Consensus 81 gg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~-- 153 (612)
T KOG0603|consen 81 GGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA-- 153 (612)
T ss_pred cchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc--
Confidence 99998887665 4577777888888999999999999 9999999999999999999999999999855322211
Q ss_pred cCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcC
Q 001562 935 TDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEA 1014 (1052)
Q Consensus 935 ~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1014 (1052)
+|+..|||||++. .+..++|.||||++++||+||..||.. +..+.+.+.. -.
T Consensus 154 ---cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------------~~~~~Il~~~-----------~~ 205 (612)
T KOG0603|consen 154 ---CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------------DTMKRILKAE-----------LE 205 (612)
T ss_pred ---ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------------HHHHHHhhhc-----------cC
Confidence 7899999999999 567789999999999999999999974 2233332211 12
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCH
Q 001562 1015 GPQENLLGMMRLASTCTVETLSTRPSV 1041 (1052)
Q Consensus 1015 ~~~~~~~~l~~Li~~cl~~dP~~RPs~ 1041 (1052)
.|.+......+++..+...+|..|.-.
T Consensus 206 ~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 206 MPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred CchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 355566668888889999999988743
No 442
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=1.1e-18 Score=196.30 Aligned_cols=88 Identities=33% Similarity=0.415 Sum_probs=39.9
Q ss_pred CCCCCCEEEccCCcCCCC----CchhhcCcccCcEEEcCCCccCCcCchhhcC-----CcCCcEEEcCCCCCCC----CC
Q 001562 554 KLMKLQRLDLRGNRVSGS----LPDELGKLKFLKWILLGGNNLTGEIPSQFGH-----LISLVVLDLSHNALTG----SI 620 (1052)
Q Consensus 554 ~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~----~~ 620 (1052)
.+++|+.|+|++|.+++. ++..+..+++|++|++++|.+++.....+.. .++|+.|++++|.++. .+
T Consensus 191 ~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l 270 (319)
T cd00116 191 ANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDL 270 (319)
T ss_pred hCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHH
Confidence 334555555555555422 2223344455555555555555322222211 2455555555555541 12
Q ss_pred cchhcccccccceeccCCcCC
Q 001562 621 PASLTKATKLESLFLAHNRLS 641 (1052)
Q Consensus 621 p~~~~~l~~L~~L~L~~N~l~ 641 (1052)
...+..+++|+++++++|+++
T Consensus 271 ~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 271 AEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred HHHHhcCCCccEEECCCCCCc
Confidence 223333445555555555555
No 443
>PRK10345 hypothetical protein; Provisional
Probab=99.70 E-value=1.7e-16 Score=163.28 Aligned_cols=136 Identities=18% Similarity=0.223 Sum_probs=106.6
Q ss_pred ccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccC-----CcCceeeEEEEEecCC---e-EEEE
Q 001562 779 IRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-----RHKNLVTLIGYYVGEA---E-MFLV 849 (1052)
Q Consensus 779 ~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~-~~lv 849 (1052)
-.+.||+|+||.||. +......+||++........+++.+|+++++.+ .||||++++|+++++. . +.+|
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 357899999999996 433333479988765444567889999999999 5799999999998763 3 3378
Q ss_pred Eee--cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHH-HHHHhcCCCCeeecCCCCCCEEECC----CCcEEEEe-cc
Q 001562 850 YNF--LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQAL-AYLHYSCVPRIVHRDIKPSNILLDE----ELNAYLSD-FG 921 (1052)
Q Consensus 850 ~e~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l-~~Lh~~~~~~iiHrDik~~Nill~~----~~~~kl~D-fg 921 (1052)
+|| +++++|.+++... .+++. ..++.+++.++ +|||+. +|+||||||+||+++. +..++|+| ||
T Consensus 84 ~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred ecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 999 5579999999653 35555 35677888777 999999 9999999999999974 34799999 55
Q ss_pred ccc
Q 001562 922 LAR 924 (1052)
Q Consensus 922 la~ 924 (1052)
...
T Consensus 156 ~~~ 158 (210)
T PRK10345 156 EST 158 (210)
T ss_pred Ccc
Confidence 443
No 444
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.70 E-value=8.4e-19 Score=197.16 Aligned_cols=264 Identities=22% Similarity=0.188 Sum_probs=145.2
Q ss_pred cchhhhCCCCCCeeEecCCCcee----cCCCCccCCCCccEEEccCccccc------cCCccccCcCcCCeEeccccccc
Q 001562 115 LSASIAKLTELRTLSVPHNSFSG----EIPAGVGELRLLEVLELQGNNFSG------KIPYQMSNLERLRVLNLSFNSFS 184 (1052)
Q Consensus 115 l~~~l~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~~L~~L~Ls~N~l~ 184 (1052)
....+..++.|+.|+++++.+++ .+++.+...++|++|+++++.+.+ .++..+..+++|+.|++++|.+.
T Consensus 15 ~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~ 94 (319)
T cd00116 15 ATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALG 94 (319)
T ss_pred hHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCC
Confidence 34455666667777777777743 255556666777777777776652 23445566667777777777776
Q ss_pred ccCCccccCCCC---CcEEEccCCcccCccc---cCCCccc-CCCCEEEccCCcCCCC----CCcccCCCCCCCEEEcCC
Q 001562 185 GEVPRGLIGNGE---LSVIDMSSNRLSGGLA---IDSSSEC-EFLTYLKLSDNFLTES----IPKEIGKCRNLKNLLLDG 253 (1052)
Q Consensus 185 ~~~p~~~~~l~~---L~~L~L~~N~l~~~~~---~~~~~~l-~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~ 253 (1052)
+..+..+..+.+ |++|++++|++++... ...+..+ ++|+.|++++|.+++. ++..+..+.+|++|++++
T Consensus 95 ~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~ 174 (319)
T cd00116 95 PDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLAN 174 (319)
T ss_pred hhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcC
Confidence 555555544444 6666666666652100 0112233 5566666666666532 222344445566666666
Q ss_pred Cccccc----cchhhhcCCCCCEEEccCCCCCCCCCcccccCCCCCeeecccCcccccCCCCCCccccccCCCchhhhcc
Q 001562 254 NILEGS----IPKEIGTISELKVLDVSRNSLTDRIPVELADCSKLSVLVLTNIDASLDLDNSRGEFSAFDGGVPYELLLS 329 (1052)
Q Consensus 254 N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~l~~~~~~~~~~~~~~p~~~~~~ 329 (1052)
|.+++. ++..+..+++|+.|++++|.+++..... ++..+...
T Consensus 175 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~----------------------------------l~~~~~~~ 220 (319)
T cd00116 175 NGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASA----------------------------------LAETLASL 220 (319)
T ss_pred CCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHH----------------------------------HHHHhccc
Confidence 665532 2333444455666666666554322111 11112223
Q ss_pred cCCcEeecCCCCCcccCCcccc-----CCCCccEEeCCCCccc----ccCCccccccCCCCEEeCCCCcCccCCCC----
Q 001562 330 RSLEVLWAPRANLGGRLPDNWS-----ESCSLKVLNLGQNSLK----GAVPKSLGMCRNLTYLDLSLNNLEGYLPM---- 396 (1052)
Q Consensus 330 ~~L~~L~l~~n~l~~~~p~~~~-----~~~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---- 396 (1052)
++|+.|++++|.+++.....+. ..+.|++|++++|.++ ..+...+..+++|+++++++|.++.....
T Consensus 221 ~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~ 300 (319)
T cd00116 221 KSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAE 300 (319)
T ss_pred CCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHH
Confidence 4455555555555542222221 2367888888888886 23345556667888888888888754222
Q ss_pred CCC-C-CccceEecccCc
Q 001562 397 QLP-V-PCMVYFNVSQNN 412 (1052)
Q Consensus 397 ~~~-~-~~L~~L~ls~N~ 412 (1052)
.+. . +.++++++.+|.
T Consensus 301 ~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 301 SLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHhhcCCchhhcccCCCC
Confidence 221 2 467777777664
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.64 E-value=6.9e-16 Score=163.10 Aligned_cols=141 Identities=23% Similarity=0.205 Sum_probs=111.2
Q ss_pred CCcccceeeecCceEEEEEE--ecCCeEEEEEEeccCchh------------------------hHHHHHHHHHHhccCC
Q 001562 776 NFSIRNLIGTGGFGSTYKAE--LVPGYLVAVKKLSIGRFQ------------------------GIQQFDAEIGTLGRIR 829 (1052)
Q Consensus 776 ~~~~~~~Lg~G~~g~V~~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 829 (1052)
.|++.+.||+|+||.||+|. ..+|+.||+|++...... ....+..|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48889999999999999997 567999999998754210 0123568999999997
Q ss_pred cCc--eeeEEEEEecCCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCC-eeecCCCCCC
Q 001562 830 HKN--LVTLIGYYVGEAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPR-IVHRDIKPSN 906 (1052)
Q Consensus 830 h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~-iiHrDik~~N 906 (1052)
+.. +.++++. ...++||||++++++..+.... ......+...++.|++.++++||+. + |+||||||+|
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~N 179 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYN 179 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhh
Confidence 533 3344442 2358999999998887665322 3456667789999999999999999 9 9999999999
Q ss_pred EEECCCCcEEEEeccccccc
Q 001562 907 ILLDEELNAYLSDFGLARLL 926 (1052)
Q Consensus 907 ill~~~~~~kl~Dfgla~~~ 926 (1052)
|+++ ++.++++|||.+...
T Consensus 180 Ili~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEEE-CCCEEEEEChhhhcc
Confidence 9999 789999999998744
No 446
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.62 E-value=3.1e-15 Score=157.15 Aligned_cols=134 Identities=24% Similarity=0.411 Sum_probs=113.5
Q ss_pred ceeeecCceEEEEEEecCCeEEEEEEeccCchh--------hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 781 NLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQ--------GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
+.||+|++|.||+|.. .|..|++|+....... ...++.+|++++..++|+++.....++.+....+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5789999999999987 5778999976543211 124577899999999999988777777777788999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARL 925 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~ 925 (1052)
++|++|.+++.... . .+..++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986532 2 7888999999999999999 999999999999999 78999999999874
No 447
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.61 E-value=2.9e-16 Score=172.66 Aligned_cols=244 Identities=23% Similarity=0.354 Sum_probs=160.6
Q ss_pred CCCcccceeeecCceEEEEEEecCC----eEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEE------EEEe--
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELVPG----YLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLI------GYYV-- 841 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~~~----~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~------~~~~-- 841 (1052)
....+.+..+..+++.+...+...+ +.++.+..............+++-.+... .|+..+..- ..+.
T Consensus 244 ~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~ 323 (516)
T KOG1033|consen 244 GSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRN 323 (516)
T ss_pred ccccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccc
Confidence 3455556667777777666533322 22333333222212222223334334333 344433221 1111
Q ss_pred ---cCCeEEEEEeecCCCCHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEE
Q 001562 842 ---GEAEMFLVYNFLSGGNLETFIHKK-SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYL 917 (1052)
Q Consensus 842 ---~~~~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl 917 (1052)
.....|+.|+++.-.+|.+|+..+ .....++.....++.|++.|++| + +.+|||+||.||+...+..+||
T Consensus 324 ~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kI 397 (516)
T KOG1033|consen 324 KVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKI 397 (516)
T ss_pred ccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhh
Confidence 123468999999999999999743 35677888999999999999999 6 8999999999999999999999
Q ss_pred Eeccccccccccc-----cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHH
Q 001562 918 SDFGLARLLEVSE-----THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVS 992 (1052)
Q Consensus 918 ~Dfgla~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~ 992 (1052)
.|||+........ .......+||..||+||.+.+..|+.++||||+|++++|++. +|...+.. .
T Consensus 398 gDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~---~f~T~~er--------~ 466 (516)
T KOG1033|consen 398 GDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI---QFSTQFER--------I 466 (516)
T ss_pred hhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH---HhccHHHH--------H
Confidence 9999998665433 234455689999999999999999999999999999999986 22211110 0
Q ss_pred HHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 001562 993 WAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQV 1044 (1052)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~ei 1044 (1052)
-...-++. ..+.|..+..+|.+ ..++.++++..|.+||++.+.
T Consensus 467 ~t~~d~r~----g~ip~~~~~d~p~e-----~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 467 ATLTDIRD----GIIPPEFLQDYPEE-----YTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred Hhhhhhhc----CCCChHHhhcCcHH-----HHHHHHhcCCCcccCchHHHH
Confidence 01111122 22333445555543 458889999999999965544
No 448
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.61 E-value=4.3e-15 Score=153.97 Aligned_cols=141 Identities=21% Similarity=0.206 Sum_probs=110.5
Q ss_pred HhhCCCcccceeeecCceEEEEEEecCCeEEEEEEeccCchh----------------------hHHHHHHHHHHhccCC
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQ----------------------GIQQFDAEIGTLGRIR 829 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~ 829 (1052)
.....|.+.+.||+|+||.||+|...+|+.||||++...... ....+..|...+.++.
T Consensus 12 ~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 91 (198)
T cd05144 12 KRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY 91 (198)
T ss_pred HcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH
Confidence 333448888999999999999998888999999987543210 0123567888888887
Q ss_pred cCc--eeeEEEEEecCCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 001562 830 HKN--LVTLIGYYVGEAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNI 907 (1052)
Q Consensus 830 h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Ni 907 (1052)
|++ +...++ ....++||||+++++|.+.... .....++.++++++.++|+. +|+||||+|.||
T Consensus 92 ~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Ni 156 (198)
T cd05144 92 EEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNI 156 (198)
T ss_pred HcCCCCCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccE
Confidence 774 444443 2455899999999998765421 33567889999999999998 999999999999
Q ss_pred EECCCCcEEEEecccccccc
Q 001562 908 LLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 908 ll~~~~~~kl~Dfgla~~~~ 927 (1052)
++++++.++|+|||++....
T Consensus 157 ll~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 157 LVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred EEcCCCcEEEEECCccccCC
Confidence 99999999999999996543
No 449
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.60 E-value=6.4e-15 Score=176.14 Aligned_cols=137 Identities=25% Similarity=0.341 Sum_probs=111.7
Q ss_pred hCCCcccceeeecCceEEEEEEecCCeEEEEEEeccC--ch------hhHHHHHHHHHHhccCCcCceeeEEEEEecCCe
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIG--RF------QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAE 845 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 845 (1052)
...|...+.||+|+||+||+|.+... .+++|+.... .. ...+++.+|++++++++|++++....++.+...
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 34456788999999999999987644 4444433211 11 123567899999999999999888877777778
Q ss_pred EEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccc
Q 001562 846 MFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARL 925 (1052)
Q Consensus 846 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~ 925 (1052)
.++||||+++++|.+++. ....++.++++++.|||+. +|+|||+||+||++ +++.++|+|||+++.
T Consensus 411 ~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 899999999999999885 3457899999999999999 99999999999999 577999999999974
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.60 E-value=5.8e-15 Score=153.44 Aligned_cols=131 Identities=25% Similarity=0.386 Sum_probs=106.8
Q ss_pred eeeecCceEEEEEEecCCeEEEEEEeccCch--------hhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 782 LIGTGGFGSTYKAELVPGYLVAVKKLSIGRF--------QGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 782 ~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
.||+|+||.||+|.+ ++..|++|+...... ....++.+|+++++.++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 379999999999985 478899998643221 11356778999999999887655555555666779999999
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccc
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLL 926 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~ 926 (1052)
+|++|.+++.... . .++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.+...
T Consensus 80 ~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGN---D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcH---H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999999875532 1 7899999999999999 999999999999999 789999999998753
No 451
>PLN03150 hypothetical protein; Provisional
Probab=99.58 E-value=6.7e-15 Score=177.52 Aligned_cols=148 Identities=32% Similarity=0.570 Sum_probs=95.7
Q ss_pred CChhhHHHHHHHHHhccCCCCCcccCcCCCCCCC----CCCceEeecC--CC--ceEEEEEcccCCCCCCCCcccccccc
Q 001562 45 VPTTDSASLLSFKASISRDPSNLLATWNSSTDHC----TWHGVTCDHF--TG--RVTALRITGKATPWPSKSSVISGTLS 116 (1052)
Q Consensus 45 ~~~~d~~all~~k~~~~~~p~~~l~~W~~~~~~C----~w~gV~C~~~--~~--~v~~l~l~~~~~~~~~~~~~l~g~l~ 116 (1052)
..++|..||+++|+++. +|.. .+|+. .+|| .|.||.|+.. .+ +|..+++.+. .++|.+|
T Consensus 369 t~~~~~~aL~~~k~~~~-~~~~--~~W~g-~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n---------~L~g~ip 435 (623)
T PLN03150 369 TLLEEVSALQTLKSSLG-LPLR--FGWNG-DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQ---------GLRGFIP 435 (623)
T ss_pred cCchHHHHHHHHHHhcC-Cccc--CCCCC-CCCCCcccccccceeeccCCCCceEEEEEECCCC---------CccccCC
Confidence 45779999999999995 4432 48963 3332 7999999632 11 3555555433 3666666
Q ss_pred hhhhCCCCCCeeEecCCCceecCCCCccCCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCccccCC-C
Q 001562 117 ASIAKLTELRTLSVPHNSFSGEIPAGVGELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGN-G 195 (1052)
Q Consensus 117 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~ 195 (1052)
++++.+++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..++++++|++|+|++|.++|.+|..+..+ .
T Consensus 436 ~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~ 515 (623)
T PLN03150 436 NDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLL 515 (623)
T ss_pred HHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccc
Confidence 666667777777777777766666666667777777777777766666666666667777777666666666665432 2
Q ss_pred CCcEEEccCC
Q 001562 196 ELSVIDMSSN 205 (1052)
Q Consensus 196 ~L~~L~L~~N 205 (1052)
++..+++.+|
T Consensus 516 ~~~~l~~~~N 525 (623)
T PLN03150 516 HRASFNFTDN 525 (623)
T ss_pred cCceEEecCC
Confidence 3333444433
No 452
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.56 E-value=3.2e-15 Score=175.42 Aligned_cols=208 Identities=23% Similarity=0.315 Sum_probs=144.6
Q ss_pred CCCcccceeeecCceEEEEEEec-CCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeec
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFL 853 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 853 (1052)
.+|+..+.|-.|+||.||.++++ ..+++|+|+ ..... +.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----ilRn--ilt~a~npfvv------------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----ILRN--ILTFAGNPFVV------------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcc-cccch-----hhhc--cccccCCccee-------------------
Confidence 46888999999999999999776 367788843 21111 1110 33333344443
Q ss_pred CCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccccccc--
Q 001562 854 SGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSET-- 931 (1052)
Q Consensus 854 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~-- 931 (1052)
|+-...++... .++.+ .+.+++|+|+. ||+|||+||.|.+|+.-|.+|++|||++++......
T Consensus 136 --gDc~tllk~~g--~lPvd--------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 --GDCATLLKNIG--PLPVD--------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred --chhhhhcccCC--CCcch--------hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 33333343321 22222 27889999999 999999999999999999999999999987632211
Q ss_pred ------------ccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHH
Q 001562 932 ------------HATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIK 999 (1052)
Q Consensus 932 ------------~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 999 (1052)
-....++||+.|.|||++....|...+|.|++|+|+||.+-|+.||.++.++ +....++.
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe--------elfg~vis 272 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE--------ELFGQVIS 272 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH--------HHHhhhhh
Confidence 0123458999999999999999999999999999999999999999977554 22222222
Q ss_pred hCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 001562 1000 EGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPS 1040 (1052)
Q Consensus 1000 ~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs 1040 (1052)
+. ..|.+.....+.+.++++.+.++.+|..|--
T Consensus 273 d~--------i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 273 DD--------IEWPEEDEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred hh--------ccccccCcCCCHHHHHHHHHHHHhChHhhcc
Confidence 11 1111122233445889999999999999873
No 453
>PLN03150 hypothetical protein; Provisional
Probab=99.51 E-value=5.4e-14 Score=169.70 Aligned_cols=113 Identities=39% Similarity=0.622 Sum_probs=61.3
Q ss_pred CCEEEccCCcCCCCCchhhcCcccCcEEEcCCCccCCcCchhhcCCcCCcEEEcCCCCCCCCCcchhcccccccceeccC
Q 001562 558 LQRLDLRGNRVSGSLPDELGKLKFLKWILLGGNNLTGEIPSQFGHLISLVVLDLSHNALTGSIPASLTKATKLESLFLAH 637 (1052)
Q Consensus 558 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 637 (1052)
++.|+|++|.++|.+|..+.++++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..++++++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 44555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CcCCCCCCcccccccccCeEecccCcCCCCCCcccccccccccCCccccCCC
Q 001562 638 NRLSGEIPVSFSTLVNLSALDLSFNNLSGHIPHLQHLDCIAFKGNKYLASCP 689 (1052)
Q Consensus 638 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~~~~~~n~~~~~~~ 689 (1052)
|+++|.+|..+..+ ..++..+.+.+|+..|.++
T Consensus 500 N~l~g~iP~~l~~~-------------------~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 500 NSLSGRVPAALGGR-------------------LLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CcccccCChHHhhc-------------------cccCceEEecCCccccCCC
Confidence 55555555444322 0123345677777776554
No 454
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.48 E-value=1.8e-13 Score=140.73 Aligned_cols=136 Identities=24% Similarity=0.289 Sum_probs=97.5
Q ss_pred cceeeecCceEEEEEEecCCeEEEEEEeccCchh--hHHH----------------------HHHHHHHhccCCcCc--e
Q 001562 780 RNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQ--GIQQ----------------------FDAEIGTLGRIRHKN--L 833 (1052)
Q Consensus 780 ~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~h~n--i 833 (1052)
.+.||+|+||.||+|...+|+.||||++...... .... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999998878999999988653221 1111 134555565554332 3
Q ss_pred eeEEEEEecCCeEEEEEeecCCCCHHH-HHhhccCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEECC
Q 001562 834 VTLIGYYVGEAEMFLVYNFLSGGNLET-FIHKKSGKKIQWSVIHKIAIDIAQALAYLHY-SCVPRIVHRDIKPSNILLDE 911 (1052)
Q Consensus 834 v~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~iiHrDik~~Nill~~ 911 (1052)
.+.+++ ...++||||++++.+.. .+.... .. .++..++.+++.++.++|. . +|+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~- 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD- 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-
Confidence 344433 24589999999854321 111111 11 5678899999999999999 7 999999999999999
Q ss_pred CCcEEEEecccccccc
Q 001562 912 ELNAYLSDFGLARLLE 927 (1052)
Q Consensus 912 ~~~~kl~Dfgla~~~~ 927 (1052)
++.++++|||.+....
T Consensus 150 ~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCcEEEEECccccccc
Confidence 8899999999997543
No 455
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.48 E-value=2.3e-13 Score=134.55 Aligned_cols=135 Identities=19% Similarity=0.173 Sum_probs=114.0
Q ss_pred ccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCc--CceeeEEEEEecCCeEEEEEeecCCC
Q 001562 779 IRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRH--KNLVTLIGYYVGEAEMFLVYNFLSGG 856 (1052)
Q Consensus 779 ~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 856 (1052)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+..++.++| ..+.++++++..++..++++||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 45789999999999998764 7899998865443 4678899999999976 58899999888888899999999887
Q ss_pred CHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccc
Q 001562 857 NLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARL 925 (1052)
Q Consensus 857 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~ 925 (1052)
.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.+..
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77654 4456677899999999999986444799999999999999989999999999874
No 456
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.46 E-value=5.4e-13 Score=141.41 Aligned_cols=134 Identities=22% Similarity=0.267 Sum_probs=104.8
Q ss_pred ceee-ecCceEEEEEEecCCeEEEEEEeccCc-------------hhhHHHHHHHHHHhccCCcCce--eeEEEEEecC-
Q 001562 781 NLIG-TGGFGSTYKAELVPGYLVAVKKLSIGR-------------FQGIQQFDAEIGTLGRIRHKNL--VTLIGYYVGE- 843 (1052)
Q Consensus 781 ~~Lg-~G~~g~V~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~- 843 (1052)
..|| .|+.|+||.+... +..++||.+.... ......+.+|++++.+++|+++ ++.+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 5687 8999999999775 7789999885321 1123567889999999998875 6677664432
Q ss_pred C---eEEEEEeecCC-CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEe
Q 001562 844 A---EMFLVYNFLSG-GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSD 919 (1052)
Q Consensus 844 ~---~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~D 919 (1052)
. ..++|+|++++ .+|.+++... .++.. .+.+++.++.+||+. ||+||||||.|||++.++.++|+|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEE
Confidence 2 23599999997 6999988643 34443 356899999999999 999999999999999988999999
Q ss_pred cccccc
Q 001562 920 FGLARL 925 (1052)
Q Consensus 920 fgla~~ 925 (1052)
||.+..
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 999874
No 457
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.41 E-value=2.2e-14 Score=170.18 Aligned_cols=255 Identities=26% Similarity=0.327 Sum_probs=190.1
Q ss_pred hCCCcccceeeecCceEEEEEEecC--CeEEEEEEeccCc--hhhHHHHHHHHHHhccCC-cCceeeEEEEEecCCeEEE
Q 001562 774 TGNFSIRNLIGTGGFGSTYKAELVP--GYLVAVKKLSIGR--FQGIQQFDAEIGTLGRIR-HKNLVTLIGYYVGEAEMFL 848 (1052)
Q Consensus 774 ~~~~~~~~~Lg~G~~g~V~~~~~~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 848 (1052)
...|.+.+.||+|+|+.|-.+.... ...+|+|.+.... .....+...|..+-+... |+|++.+++...+....++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 3467888889999999998885533 4456667665443 222344555777777776 9999999999999999999
Q ss_pred EEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH-hcCCCCeeecCCCCCCEEECCCC-cEEEEeccccccc
Q 001562 849 VYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLH-YSCVPRIVHRDIKPSNILLDEEL-NAYLSDFGLARLL 926 (1052)
Q Consensus 849 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh-~~~~~~iiHrDik~~Nill~~~~-~~kl~Dfgla~~~ 926 (1052)
+.||..++++.+-+........+......+..|+..++.|+| .. ++.||||||+|.+++..+ ..+++|||+|..+
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 999999999988883222225667778889999999999999 77 999999999999999999 9999999999987
Q ss_pred cc--cccccccCccc-cccccccccccCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCC
Q 001562 927 EV--SETHATTDVAG-TFGYVAPEYATTCR-VSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGR 1002 (1052)
Q Consensus 927 ~~--~~~~~~~~~~g-~~~y~aPE~~~~~~-~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1052)
.. +.........| ++.|+|||...+.. ..+..|+||.|+++.-+++|..|++...... .....|....
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~---~~~~~~~~~~----- 247 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD---GRYSSWKSNK----- 247 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc---ccceeecccc-----
Confidence 65 33334445667 99999999998854 4567899999999999999999987544332 1112221111
Q ss_pred ccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 001562 1003 SSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVL 1045 (1052)
Q Consensus 1003 ~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil 1045 (1052)
..+....|.... ....++..+++..+|..|.+.+++.
T Consensus 248 --~~~~~~~~~~~~----~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 248 --GRFTQLPWNSIS----DQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred --cccccCccccCC----hhhhhcccccccCCchhcccccccc
Confidence 011112222222 2366788889989999999988764
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.34 E-value=4.3e-14 Score=155.25 Aligned_cols=181 Identities=33% Similarity=0.482 Sum_probs=116.5
Q ss_pred CCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCccccCCCCCcEEEccCCcccCccccCCCcccCCCCE
Q 001562 145 ELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGNGELSVIDMSSNRLSGGLAIDSSSECEFLTY 224 (1052)
Q Consensus 145 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~ 224 (1052)
.+..-...||+.|++. ++|..+..+..|..|.|+.|.+. .+|..+.++..|++|||+.|+++. +| ..+..+ -|+.
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS~-lp-~~lC~l-pLkv 147 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLSH-LP-DGLCDL-PLKV 147 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhhc-CC-hhhhcC-ccee
Confidence 3444556667777776 66777766677777777777776 666666666666666666666653 22 111222 2666
Q ss_pred EEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEEEccCCCCCCCCCcccccCCCCCeeecccCcc
Q 001562 225 LKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVLDVSRNSLTDRIPVELADCSKLSVLVLTNIDA 304 (1052)
Q Consensus 225 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~ 304 (1052)
|-+++|+++ .+|..++.+..|..|+.+.|++. .+|..++++.+|+.|.+..|++.. +|.+++.|
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~-lp~El~~L------------- 211 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLED-LPEELCSL------------- 211 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhh-CCHHHhCC-------------
Confidence 777777776 46666776677777777777776 667777777777777777777763 44444322
Q ss_pred cccCCCCCCccccccCCCchhhhcccCCcEeecCCCCCcccCCccccCCCCccEEeCCCCcccccCCccccccCCCCEEe
Q 001562 305 SLDLDNSRGEFSAFDGGVPYELLLSRSLEVLWAPRANLGGRLPDNWSESCSLKVLNLGQNSLKGAVPKSLGMCRNLTYLD 384 (1052)
Q Consensus 305 ~~~l~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 384 (1052)
.|..||+|.|+++ .+|..|.+|+.|++|-
T Consensus 212 --------------------------------------------------pLi~lDfScNkis-~iPv~fr~m~~Lq~l~ 240 (722)
T KOG0532|consen 212 --------------------------------------------------PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQ 240 (722)
T ss_pred --------------------------------------------------ceeeeecccCcee-ecchhhhhhhhheeee
Confidence 3666777777777 6777777777777777
Q ss_pred CCCCcCccCCCCCC
Q 001562 385 LSLNNLEGYLPMQL 398 (1052)
Q Consensus 385 Ls~N~l~~~~p~~~ 398 (1052)
|.+|.|+. +|.++
T Consensus 241 LenNPLqS-PPAqI 253 (722)
T KOG0532|consen 241 LENNPLQS-PPAQI 253 (722)
T ss_pred eccCCCCC-ChHHH
Confidence 77777764 34433
No 459
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.33 E-value=5.1e-11 Score=137.49 Aligned_cols=141 Identities=21% Similarity=0.261 Sum_probs=101.4
Q ss_pred cceeeecCceEEEEEEecCCeEEEEEEeccCchhhH----------------------------------------HHHH
Q 001562 780 RNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGI----------------------------------------QQFD 819 (1052)
Q Consensus 780 ~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~ 819 (1052)
.+.||.|++|.||+|+..+|+.||||+.+....+.. -+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 367999999999999999999999999865421110 1244
Q ss_pred HHHHHhccCC----cCceeeEEEEEe-cCCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHH-HHHHHHhcC
Q 001562 820 AEIGTLGRIR----HKNLVTLIGYYV-GEAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQ-ALAYLHYSC 893 (1052)
Q Consensus 820 ~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~-~l~~Lh~~~ 893 (1052)
.|++.+.+++ |.+-+.+-.++. ..+..++||||++|++|.++..... ... ...+++..+++ .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~---~~~~ia~~~~~~~l~ql~~~- 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGL---DRKALAENLARSFLNQVLRD- 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCC---CHHHHHHHHHHHHHHHHHhC-
Confidence 5666665552 333333333332 2456799999999999998875432 112 23456666666 46788888
Q ss_pred CCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 894 VPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 894 ~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
|++|+|++|.||+++.++.++++|||++..+.
T Consensus 277 --g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 --GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred --CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999997654
No 460
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.28 E-value=9.7e-11 Score=133.11 Aligned_cols=167 Identities=18% Similarity=0.226 Sum_probs=131.7
Q ss_pred EecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEeecCCCCHHHHHhhccCCCccHHH
Q 001562 795 ELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNFLSGGNLETFIHKKSGKKIQWSV 874 (1052)
Q Consensus 795 ~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~ 874 (1052)
+..++.+|.|...+.......+...+-++.++.++||+|+++++.+..++..|+|+|-+ ..|..++++. +...
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l-----~~~~ 105 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKEL-----GKEE 105 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHh-----HHHH
Confidence 34467889998887666544566788899999999999999999999999999999988 4788888764 4677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccCccccccccccccccCCCC
Q 001562 875 IHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRV 954 (1052)
Q Consensus 875 ~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~ 954 (1052)
...-+.||+.||.+||..+ +++|+++....|+|++.|+.||++|.++........ .....+.-..|..|+.+....
T Consensus 106 v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~- 181 (690)
T KOG1243|consen 106 VCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE- 181 (690)
T ss_pred HHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc-
Confidence 7788999999999999776 899999999999999999999999998865432111 111122223566777554432
Q ss_pred CchhHHHHHHHHHHHHHhC
Q 001562 955 SDKADVYSFGVVLLELISG 973 (1052)
Q Consensus 955 ~~~sDv~slG~il~elltg 973 (1052)
-..|.|.||+++||++.|
T Consensus 182 -~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 182 -WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred -cchhhhhHHHHHHHHhCc
Confidence 346999999999999998
No 461
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.26 E-value=1.4e-13 Score=151.25 Aligned_cols=123 Identities=28% Similarity=0.430 Sum_probs=74.3
Q ss_pred ceEEEccCcccccccccccCCCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCCccCCcCchhhcCCcCCcEEEcCC
Q 001562 534 LVEFEAANNQISGSIAAGVGKLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGNNLTGEIPSQFGHLISLVVLDLSH 613 (1052)
Q Consensus 534 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 613 (1052)
|+.|-+++|+++ .+|..++.+..|..||.+.|.|. .+|..++++.+|+.|.+..|++. .+|++++. -.|..||+|.
T Consensus 145 Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfSc 220 (722)
T KOG0532|consen 145 LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFSC 220 (722)
T ss_pred ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC-Cceeeeeccc
Confidence 455556666665 55556666666666666666666 56666666666666666666666 45555653 3566666666
Q ss_pred CCCCCCCcchhcccccccceeccCCcCCCCCCcccccc---cccCeEecccC
Q 001562 614 NALTGSIPASLTKATKLESLFLAHNRLSGEIPVSFSTL---VNLSALDLSFN 662 (1052)
Q Consensus 614 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~l~~N 662 (1052)
|+++ .+|-.|.+|+.|++|-|.+|.++ ..|..+... .=.++|+..-+
T Consensus 221 Nkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 221 NKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred Ccee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 6666 56666666666666666666666 444443322 22345555444
No 462
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.26 E-value=7.3e-12 Score=129.15 Aligned_cols=201 Identities=22% Similarity=0.317 Sum_probs=139.2
Q ss_pred HHhccCCcCceeeEEEEEecC-----CeEEEEEeecCCCCHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001562 823 GTLGRIRHKNLVTLIGYYVGE-----AEMFLVYNFLSGGNLETFIHKKS--GKKIQWSVIHKIAIDIAQALAYLHYSCVP 895 (1052)
Q Consensus 823 ~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~ 895 (1052)
.-+-.+-|.|+++++.++.+. .+..++.|||..|++..+|++.. ...+......+|+-||..|+.|||+. .|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CC
Confidence 334455699999999998653 45789999999999999998754 45677888899999999999999975 67
Q ss_pred CeeecCCCCCCEEECCCCcEEEEeccccccccc----cccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHH
Q 001562 896 RIVHRDIKPSNILLDEELNAYLSDFGLARLLEV----SETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELI 971 (1052)
Q Consensus 896 ~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~ell 971 (1052)
.|+|+++..+-|++..+|-+||.--.-. .+.+ ..........+-++|.+||.-.....+-++|||+||+...||.
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCcc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 8999999999999999988887421111 1111 1111122234567999999877777778999999999999999
Q ss_pred hCCCCCCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 972 SGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 972 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
.|..--.............. ..+ ......+ =+.++..|++..|..||+|++++.
T Consensus 277 ilEiq~tnseS~~~~ee~ia----~~i------~~len~l-----------qr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIA----NVI------IGLENGL-----------QRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred HheeccCCCcceeehhhhhh----hhe------eeccCcc-----------ccCcCcccccCCCCCCcchhhhhc
Confidence 88754322211111111000 000 0000000 124777899999999999998764
No 463
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.24 E-value=7.2e-12 Score=141.40 Aligned_cols=247 Identities=25% Similarity=0.328 Sum_probs=183.1
Q ss_pred CCcccceeee--cCceEEEEEEe---cCCeEEEEEEeccCch--hhHHHHHHHHHHhccC-CcCceeeEEEEEecCCeEE
Q 001562 776 NFSIRNLIGT--GGFGSTYKAEL---VPGYLVAVKKLSIGRF--QGIQQFDAEIGTLGRI-RHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 776 ~~~~~~~Lg~--G~~g~V~~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 847 (1052)
.|.+.+.+|. |.+|.||.+.. .++..+|+|+-+.... .....-.+|+...+++ .|++.++.+..+.+.+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4666788999 99999999965 4578899998544322 2233345677777777 4999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHH----HHHHHHhcCCCCeeecCCCCCCEEECCC-CcEEEEeccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQ----ALAYLHYSCVPRIVHRDIKPSNILLDEE-LNAYLSDFGL 922 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~----~l~~Lh~~~~~~iiHrDik~~Nill~~~-~~~kl~Dfgl 922 (1052)
+-+|++ +.++..+.+... ..++...++.+..+..+ |+.++|+. .++|-|+||.||....+ ..++++|||+
T Consensus 195 iqtE~~-~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred eeeccc-cchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCcce
Confidence 999988 689999987754 45777788888888888 99999999 99999999999999999 8899999999
Q ss_pred cccccccccc----cccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHH
Q 001562 923 ARLLEVSETH----ATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLI 998 (1052)
Q Consensus 923 a~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 998 (1052)
...+....-. ......|...|++||..++ .++.++|+|++|.++.+..++-.++...... .|.+ .
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~--------~W~~--~ 338 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNS--------SWSQ--L 338 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCC--------Cccc--c
Confidence 9988654321 1222357778999999887 5788999999999999999988776532111 1111 1
Q ss_pred HhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 001562 999 KEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 999 ~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~ 1046 (1052)
+.+... .++.... ..++...+..|+.++|..|++.+.+..
T Consensus 339 r~~~ip----~e~~~~~----s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 339 RQGYIP----LEFCEGG----SSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ccccCc----hhhhcCc----chhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 111111 0111111 123445888999999999999887654
No 464
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.23 E-value=1.4e-11 Score=142.67 Aligned_cols=200 Identities=32% Similarity=0.434 Sum_probs=118.7
Q ss_pred EEEccCccccccCCccccCcCcCCeEecccccccccCCccccCCC-CCcEEEccCCcccCccccCCCcccCCCCEEEccC
Q 001562 151 VLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGNG-ELSVIDMSSNRLSGGLAIDSSSECEFLTYLKLSD 229 (1052)
Q Consensus 151 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~ 229 (1052)
.++++.|.+. ..+..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++.. ++ .....+++|+.|++++
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~~-l~-~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIES-LP-SPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchhh-hh-hhhhccccccccccCC
Confidence 4666666654 22333444466666666666666 5555555553 56666666666553 11 2344566666666666
Q ss_pred CcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEEEccCCCCCCCCCcccccCCCCCeeecccCcccccCC
Q 001562 230 NFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVLDVSRNSLTDRIPVELADCSKLSVLVLTNIDASLDLD 309 (1052)
Q Consensus 230 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~l~ 309 (1052)
|+++. +|...+.+++|+.|++++|+++ .+|........|++|++++|.+. ..+..+.++.++..+.+.+|+
T Consensus 173 N~l~~-l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~------ 243 (394)
T COG4886 173 NDLSD-LPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNK------ 243 (394)
T ss_pred chhhh-hhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCce------
Confidence 66663 4444445666666777777666 55655555555666777666433 244555555555555444332
Q ss_pred CCCCccccccCCCchhhhcccCCcEeecCCCCCcccCCccccCCCCccEEeCCCCcccccCCccccccCCCCEEeCCCCc
Q 001562 310 NSRGEFSAFDGGVPYELLLSRSLEVLWAPRANLGGRLPDNWSESCSLKVLNLGQNSLKGAVPKSLGMCRNLTYLDLSLNN 389 (1052)
Q Consensus 310 ~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 389 (1052)
+.. ++..++.++++++|++++|+++. ++. ++.+.+|+.|++++|.
T Consensus 244 --------------------------------~~~-~~~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~ 288 (394)
T COG4886 244 --------------------------------LED-LPESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNS 288 (394)
T ss_pred --------------------------------eee-ccchhccccccceeccccccccc-ccc-ccccCccCEEeccCcc
Confidence 221 15556667778888888888873 443 7778888888888888
Q ss_pred CccCCCCCC
Q 001562 390 LEGYLPMQL 398 (1052)
Q Consensus 390 l~~~~p~~~ 398 (1052)
++..+|...
T Consensus 289 ~~~~~~~~~ 297 (394)
T COG4886 289 LSNALPLIA 297 (394)
T ss_pred ccccchhhh
Confidence 877666544
No 465
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.21 E-value=1.2e-11 Score=143.17 Aligned_cols=178 Identities=32% Similarity=0.515 Sum_probs=102.0
Q ss_pred hhhCCCCCCeeEecCCCceecCCCCccCCC-CccEEEccCccccccCCccccCcCcCCeEecccccccccCCccccCCCC
Q 001562 118 SIAKLTELRTLSVPHNSFSGEIPAGVGELR-LLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGNGE 196 (1052)
Q Consensus 118 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 196 (1052)
.+..++.++.|++.+|+++ .+|...+.+. +|+.|++++|++. .+|..++.+++|+.|++++|+++ .+|...+.+++
T Consensus 111 ~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~ 187 (394)
T COG4886 111 ELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSN 187 (394)
T ss_pred hhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhh
Confidence 3444556666666666666 5555555553 6666666666666 55555666666666666666666 55555555666
Q ss_pred CcEEEccCCcccCccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEEEcc
Q 001562 197 LSVIDMSSNRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVLDVS 276 (1052)
Q Consensus 197 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 276 (1052)
|+.|++++|+++. ++.. ...+..|++|.+++|.+. ..+..+..+.++..+.+.+|++. .++..++.+++++.|+++
T Consensus 188 L~~L~ls~N~i~~-l~~~-~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s 263 (394)
T COG4886 188 LNNLDLSGNKISD-LPPE-IELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLS 263 (394)
T ss_pred hhheeccCCcccc-Cchh-hhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceeccc
Confidence 6666666666654 2211 122334666666666433 24445556666666666666665 335556666666666666
Q ss_pred CCCCCCCCCcccccCCCCCeeecccCcc
Q 001562 277 RNSLTDRIPVELADCSKLSVLVLTNIDA 304 (1052)
Q Consensus 277 ~N~l~~~~p~~l~~l~~L~~L~L~~n~~ 304 (1052)
+|+++. ++. ++.+.+++.|++++|.+
T Consensus 264 ~n~i~~-i~~-~~~~~~l~~L~~s~n~~ 289 (394)
T COG4886 264 NNQISS-ISS-LGSLTNLRELDLSGNSL 289 (394)
T ss_pred cccccc-ccc-ccccCccCEEeccCccc
Confidence 666653 222 55555555555555443
No 466
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.19 E-value=6.7e-10 Score=129.37 Aligned_cols=142 Identities=18% Similarity=0.238 Sum_probs=95.4
Q ss_pred CCCcccceeeecCceEEEEEEecC-CeEEEEEEeccCchhh----------------------------------H----
Q 001562 775 GNFSIRNLIGTGGFGSTYKAELVP-GYLVAVKKLSIGRFQG----------------------------------I---- 815 (1052)
Q Consensus 775 ~~~~~~~~Lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~----------------------------------~---- 815 (1052)
..|+. +.||.|++|.||+|..++ |+.||||+.+....+. .
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45776 789999999999999887 9999999987542110 0
Q ss_pred --HHHHHHHHHhccCC----cCceeeEEEEEec-CCeEEEEEeecCCCCHHHHHhhcc-CC---CccHHHHHHHHHHHHH
Q 001562 816 --QQFDAEIGTLGRIR----HKNLVTLIGYYVG-EAEMFLVYNFLSGGNLETFIHKKS-GK---KIQWSVIHKIAIDIAQ 884 (1052)
Q Consensus 816 --~~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~-~~---~l~~~~~~~i~~~i~~ 884 (1052)
-++.+|+..+.+++ +...+.+-.++.+ .+..++||||++|+++.++-.-.. +. .+....+..++.|+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-- 276 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-- 276 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH--
Confidence 12344555554442 3333444444433 456789999999999987532111 10 12233333333443
Q ss_pred HHHHHHhcCCCCeeecCCCCCCEEECCCC----cEEEEecccccccc
Q 001562 885 ALAYLHYSCVPRIVHRDIKPSNILLDEEL----NAYLSDFGLARLLE 927 (1052)
Q Consensus 885 ~l~~Lh~~~~~~iiHrDik~~Nill~~~~----~~kl~Dfgla~~~~ 927 (1052)
... |++|+|++|.||+++.++ .++++|||++..+.
T Consensus 277 -----f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 -----FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred -----HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 345 999999999999999988 99999999997654
No 467
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.14 E-value=2.9e-11 Score=119.45 Aligned_cols=105 Identities=32% Similarity=0.363 Sum_probs=22.4
Q ss_pred CCceEEEccCcccccccccccC-CCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCCccCCcCchhh-cCCcCCcEE
Q 001562 532 VQLVEFEAANNQISGSIAAGVG-KLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGNNLTGEIPSQF-GHLISLVVL 609 (1052)
Q Consensus 532 ~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L 609 (1052)
..+++|+|++|+|+.+ +.++ .+.+|+.|+|++|+|+.. + .+..+++|+.|++++|+|+ .+.+.+ ..+++|++|
T Consensus 19 ~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 19 VKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQEL 93 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EE
T ss_pred cccccccccccccccc--cchhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEE
Confidence 3455555555555522 1233 344555555555555522 1 3444555555555555555 222222 234555555
Q ss_pred EcCCCCCCCCCc-chhcccccccceeccCCcCC
Q 001562 610 DLSHNALTGSIP-ASLTKATKLESLFLAHNRLS 641 (1052)
Q Consensus 610 ~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 641 (1052)
+|++|+|...-- ..+..+++|+.|+|.+|+++
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 555555542110 22333444444444444443
No 468
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.12 E-value=1.9e-11 Score=124.12 Aligned_cols=133 Identities=29% Similarity=0.306 Sum_probs=111.6
Q ss_pred CCCceEEEccCcccccccccccCCCCCCCEEEccCCcCCCCCchhhcCcccCcEEEcCCCccCCcCchhhcCCcCCcEEE
Q 001562 531 CVQLVEFEAANNQISGSIAAGVGKLMKLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGNNLTGEIPSQFGHLISLVVLD 610 (1052)
Q Consensus 531 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 610 (1052)
+..|+++||++|.|+ .+.+...-++.++.|+++.|.|..+ +.+..+++|+.||||+|.++ .+.++-..+.+.+.|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 357899999999998 6677777889999999999999833 34888999999999999998 7778888889999999
Q ss_pred cCCCCCCCCCcchhcccccccceeccCCcCCCCC-CcccccccccCeEecccCcCCCCCC
Q 001562 611 LSHNALTGSIPASLTKATKLESLFLAHNRLSGEI-PVSFSTLVNLSALDLSFNNLSGHIP 669 (1052)
Q Consensus 611 l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p 669 (1052)
|++|.|... ..++.|-+|..||+++|+|.... -..++++|-|..+.|.+|++++.+.
T Consensus 359 La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 359 LAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 999998732 45788889999999999998432 2568899999999999999987665
No 469
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.11 E-value=2.3e-10 Score=115.46 Aligned_cols=129 Identities=22% Similarity=0.181 Sum_probs=95.9
Q ss_pred ceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCcee-eEEEEEecCCeEEEEEeecCCCCHH
Q 001562 781 NLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLV-TLIGYYVGEAEMFLVYNFLSGGNLE 859 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~gsL~ 859 (1052)
+.++.|.++.||+++.. +..|++|....... ....+..|+++++.+.+.+++ +++.+. ....++||||+++.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 56889999999999876 77899998754432 223567899999988665544 444443 23458999999998876
Q ss_pred HHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCEEECCCCcEEEEeccccc
Q 001562 860 TFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSC--VPRIVHRDIKPSNILLDEELNAYLSDFGLAR 924 (1052)
Q Consensus 860 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~--~~~iiHrDik~~Nill~~~~~~kl~Dfgla~ 924 (1052)
+.. . ....++.+++++++.||... ..+++|+|++|.||+++ ++.++++|||.+.
T Consensus 80 ~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 80 TED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 430 0 11245678999999999882 12359999999999999 5689999999986
No 470
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.05 E-value=1.5e-09 Score=109.51 Aligned_cols=137 Identities=15% Similarity=0.154 Sum_probs=98.1
Q ss_pred cceeeecCceEEEEEEecC-------CeEEEEEEeccCch----------------------hhHHH----HHHHHHHhc
Q 001562 780 RNLIGTGGFGSTYKAELVP-------GYLVAVKKLSIGRF----------------------QGIQQ----FDAEIGTLG 826 (1052)
Q Consensus 780 ~~~Lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~----------------------~~~~~----~~~E~~~l~ 826 (1052)
...||.|.-+.||.|.-.+ +..+|||+.+.... ..... .++|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999995442 47899997743210 00112 237999999
Q ss_pred cCCc--CceeeEEEEEecCCeEEEEEeecCCCCHHH-HHhhccCCCccHHHHHHHHHHHHHHHHHH-HhcCCCCeeecCC
Q 001562 827 RIRH--KNLVTLIGYYVGEAEMFLVYNFLSGGNLET-FIHKKSGKKIQWSVIHKIAIDIAQALAYL-HYSCVPRIVHRDI 902 (1052)
Q Consensus 827 ~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~i~~~l~~L-h~~~~~~iiHrDi 902 (1052)
++.. -++...+++ ...++||||+.+..+.. .++. ..++.++...+..+++.++..+ |.. +|+|||+
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL 151 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL 151 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 9853 345555554 45689999996643321 2222 2345566778889999999999 788 9999999
Q ss_pred CCCCEEECCCCcEEEEecccccccc
Q 001562 903 KPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 903 k~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
++.||++++ +.++|+|||.+....
T Consensus 152 s~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEEC-CcEEEEECCCceeCC
Confidence 999999974 589999999987553
No 471
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.05 E-value=1.2e-10 Score=115.16 Aligned_cols=110 Identities=33% Similarity=0.474 Sum_probs=44.0
Q ss_pred cCCCCCCCEEEccCCcCCCCCchhhc-CcccCcEEEcCCCccCCcCchhhcCCcCCcEEEcCCCCCCCCCcchh-ccccc
Q 001562 552 VGKLMKLQRLDLRGNRVSGSLPDELG-KLKFLKWILLGGNNLTGEIPSQFGHLISLVVLDLSHNALTGSIPASL-TKATK 629 (1052)
Q Consensus 552 ~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~ 629 (1052)
+.+..++++|+|++|+|+. +. .++ .+.+|+.|+|++|+|+ .++ .+..++.|++|++++|+|+ .+++.+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred ccccccccccccccccccc-cc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 3455678999999999994 33 465 6889999999999999 444 4888999999999999999 455555 46999
Q ss_pred ccceeccCCcCCCCCC-cccccccccCeEecccCcCCC
Q 001562 630 LESLFLAHNRLSGEIP-VSFSTLVNLSALDLSFNNLSG 666 (1052)
Q Consensus 630 L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~ 666 (1052)
|++|+|++|+|...-. ..+..+++|+.|+|.+|+++.
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 9999999999985322 456789999999999999984
No 472
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.04 E-value=3.4e-09 Score=101.65 Aligned_cols=144 Identities=21% Similarity=0.287 Sum_probs=109.0
Q ss_pred ccceeeecCceEEEEEEecCCeEEEEEEeccCchh--------hHHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEE
Q 001562 779 IRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQ--------GIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVY 850 (1052)
Q Consensus 779 ~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 850 (1052)
....+.+|+-+.|+++.+. |+...||.-...... ...+.++|++.+.+.+--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4678899999999999886 777777743222211 1355678999998886545544444555666778999
Q ss_pred eecCC-CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCC---cEEEEeccccccc
Q 001562 851 NFLSG-GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEEL---NAYLSDFGLARLL 926 (1052)
Q Consensus 851 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~---~~kl~Dfgla~~~ 926 (1052)
||+++ .++.+|+...-......+....++..|-+.+.-||.. +|+|+|+..+||++..++ .+.++|||++..-
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 99965 4889998876645555555578899999999999999 999999999999996554 3589999998754
No 473
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=2.4e-09 Score=103.57 Aligned_cols=131 Identities=24% Similarity=0.398 Sum_probs=100.9
Q ss_pred ceeeecCceEEEEEEecCCeEEEEEEeccCchh--h------HHHHHHHHHHhccCCcCceeeEEEEEecCCeEEEEEee
Q 001562 781 NLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQ--G------IQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMFLVYNF 852 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 852 (1052)
..+++|+-+.+|.+.+. |.++++|.-..+... . .++-.+|+.++.+++--.|...+-+..+.....++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 45789999999999886 555666643222211 1 24456799999998765655555555667788999999
Q ss_pred cCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccc
Q 001562 853 LSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARL 925 (1052)
Q Consensus 853 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~ 925 (1052)
++|..|.+++... ...++..+-.-+.-||.. ||+|+|+.++||.+..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA---------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc---------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999999765 244677778888899999 999999999999999874 99999999974
No 474
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.01 E-value=4e-11 Score=121.82 Aligned_cols=141 Identities=26% Similarity=0.278 Sum_probs=74.2
Q ss_pred cccccchhhhCCCCCCeeEecCCCceecCCCCccCCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCcc
Q 001562 111 ISGTLSASIAKLTELRTLSVPHNSFSGEIPAGVGELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRG 190 (1052)
Q Consensus 111 l~g~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 190 (1052)
..|..-.++..-+.|++|||++|.|+ .+.++..-++.++.|++|+|.+. .+-. +..|++|+.||||+|.++ .+..+
T Consensus 272 ~~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gw 347 (490)
T KOG1259|consen 272 SNGSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGW 347 (490)
T ss_pred cCCceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhh
Confidence 34444444444455555566665555 55555555555555555555555 2221 555555555555555554 33333
Q ss_pred ccCCCCCcEEEccCCcccCccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccc-cchhhhcCCC
Q 001562 191 LIGNGELSVIDMSSNRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGS-IPKEIGTISE 269 (1052)
Q Consensus 191 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~ 269 (1052)
-.. +.+++.|.|+.|.|.. -+.++.+-+|..|++++|+|... --..+++++-
T Consensus 348 h~K-------------------------LGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPC 400 (490)
T KOG1259|consen 348 HLK-------------------------LGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPC 400 (490)
T ss_pred Hhh-------------------------hcCEeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccH
Confidence 333 4445555555555542 13345555666666666666522 1234566666
Q ss_pred CCEEEccCCCCCC
Q 001562 270 LKVLDVSRNSLTD 282 (1052)
Q Consensus 270 L~~L~L~~N~l~~ 282 (1052)
|+.+.|.+|.+.+
T Consensus 401 LE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 401 LETLRLTGNPLAG 413 (490)
T ss_pred HHHHhhcCCCccc
Confidence 6666666666664
No 475
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.00 E-value=1.8e-11 Score=127.95 Aligned_cols=250 Identities=23% Similarity=0.262 Sum_probs=115.7
Q ss_pred hhhhCCCCCCeeEecCCCceec----CCCCccCCCCccEEEccCc---cccccCCcc-------ccCcCcCCeEeccccc
Q 001562 117 ASIAKLTELRTLSVPHNSFSGE----IPAGVGELRLLEVLELQGN---NFSGKIPYQ-------MSNLERLRVLNLSFNS 182 (1052)
Q Consensus 117 ~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N---~l~~~~p~~-------~~~l~~L~~L~Ls~N~ 182 (1052)
+.+.....++.++|++|.|..+ +.+.+.+.++|+..++|+= ++...+|.. +-..++|++||||+|.
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 3445556666677777666532 3444555666666666543 122234433 3344577777777777
Q ss_pred ccccCCcccc----CCCCCcEEEccCCcccCccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCcccc
Q 001562 183 FSGEVPRGLI----GNGELSVIDMSSNRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEG 258 (1052)
Q Consensus 183 l~~~~p~~~~----~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 258 (1052)
|....+..|. .+..|++|+|.+|.+.- .....++ .-|..|. .| ...+.-+.|+++..++|++..
T Consensus 104 ~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~-~ag~~l~--~al~~l~--~~-------kk~~~~~~Lrv~i~~rNrlen 171 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTDLEELYLNNCGLGP-EAGGRLG--RALFELA--VN-------KKAASKPKLRVFICGRNRLEN 171 (382)
T ss_pred cCccchHHHHHHHHhccCHHHHhhhcCCCCh-hHHHHHH--HHHHHHH--HH-------hccCCCcceEEEEeecccccc
Confidence 7644444433 33555555555555431 0000000 0011111 11 112233456666666666642
Q ss_pred c----cchhhhcCCCCCEEEccCCCCCCCC----CcccccCCCCCeeecccCcccccCCCCCCccccccCC--Cchhhhc
Q 001562 259 S----IPKEIGTISELKVLDVSRNSLTDRI----PVELADCSKLSVLVLTNIDASLDLDNSRGEFSAFDGG--VPYELLL 328 (1052)
Q Consensus 259 ~----~p~~~~~l~~L~~L~L~~N~l~~~~----p~~l~~l~~L~~L~L~~n~~~~~l~~~~~~~~~~~~~--~p~~~~~ 328 (1052)
. +...|...+.|+.+.+++|.+.... -..|..+++|++|+|.+|-++. .|+ +...+..
T Consensus 172 ~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~------------egs~~LakaL~s 239 (382)
T KOG1909|consen 172 GGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTL------------EGSVALAKALSS 239 (382)
T ss_pred ccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhh------------HHHHHHHHHhcc
Confidence 2 2334455566666666666654221 1234555555555555433221 011 1122233
Q ss_pred ccCCcEeecCCCCCcccCCccc-----cCCCCccEEeCCCCcccc----cCCccccccCCCCEEeCCCCcC
Q 001562 329 SRSLEVLWAPRANLGGRLPDNW-----SESCSLKVLNLGQNSLKG----AVPKSLGMCRNLTYLDLSLNNL 390 (1052)
Q Consensus 329 ~~~L~~L~l~~n~l~~~~p~~~-----~~~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l 390 (1052)
+++|++|++++|.+.......| ...++|++|.|.+|.|+. .+...+...+.|..|+|++|.+
T Consensus 240 ~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 240 WPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred cchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 3444444444454444333222 123455555555555541 1222333445555555555555
No 476
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.00 E-value=5.8e-11 Score=127.37 Aligned_cols=217 Identities=23% Similarity=0.192 Sum_probs=148.8
Q ss_pred ccCCCCccEEEccCccccccCC--ccccCcCcCCeEecccccccc--cCCccccCCCCCcEEEccCCcccCccccCCCcc
Q 001562 143 VGELRLLEVLELQGNNFSGKIP--YQMSNLERLRVLNLSFNSFSG--EVPRGLIGNGELSVIDMSSNRLSGGLAIDSSSE 218 (1052)
Q Consensus 143 ~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 218 (1052)
=.++.+|+...|.+..+. ..+ .....+++++.||||.|-+.. .+-.-...+++|+.|+|+.|++.-......-..
T Consensus 117 Qsn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 117 QSNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hhhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhh
Confidence 366788888888888876 333 356778889999999988773 333455578889999999998875444333445
Q ss_pred cCCCCEEEccCCcCCCC-CCcccCCCCCCCEEEcCCCccccccchhhhcCCCCCEEEccCCCCCCCCC--cccccCCCCC
Q 001562 219 CEFLTYLKLSDNFLTES-IPKEIGKCRNLKNLLLDGNILEGSIPKEIGTISELKVLDVSRNSLTDRIP--VELADCSKLS 295 (1052)
Q Consensus 219 l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~l~~l~~L~ 295 (1052)
++.|+.|.|+.|.++.. +...+..+++|+.|+|..|...+........++.|+.|||++|++-. .+ ...+.++.|+
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~ 274 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLN 274 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchh
Confidence 67889999999998832 33445678899999999996444445555667889999999998874 33 4467777777
Q ss_pred eeecccCcccccCCCCCCccccccCCCchhhhcccCCcEeecCCCCCcccCCccccCCCCccEEeCCCCcccc-cCCccc
Q 001562 296 VLVLTNIDASLDLDNSRGEFSAFDGGVPYELLLSRSLEVLWAPRANLGGRLPDNWSESCSLKVLNLGQNSLKG-AVPKSL 374 (1052)
Q Consensus 296 ~L~L~~n~~~~~l~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~Ls~N~l~~-~~p~~~ 374 (1052)
.|.++.+.+... ...++ ..-+.-..+++|++|+++.|+|.. ..-..+
T Consensus 275 ~Lnls~tgi~si--------~~~d~------------------------~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l 322 (505)
T KOG3207|consen 275 QLNLSSTGIASI--------AEPDV------------------------ESLDKTHTFPKLEYLNISENNIRDWRSLNHL 322 (505)
T ss_pred hhhccccCcchh--------cCCCc------------------------cchhhhcccccceeeecccCccccccccchh
Confidence 777776544310 00000 000113445689999999999952 122355
Q ss_pred cccCCCCEEeCCCCcCccC
Q 001562 375 GMCRNLTYLDLSLNNLEGY 393 (1052)
Q Consensus 375 ~~l~~L~~L~Ls~N~l~~~ 393 (1052)
..+++|+.|....|.|+..
T Consensus 323 ~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 323 RTLENLKHLRITLNYLNKE 341 (505)
T ss_pred hccchhhhhhccccccccc
Confidence 6678888888889988754
No 477
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.96 E-value=5.6e-10 Score=82.84 Aligned_cols=40 Identities=53% Similarity=1.130 Sum_probs=31.6
Q ss_pred hhhHHHHHHHHHhccCCCCCcccCcCCC--CCCCCCCceEee
Q 001562 47 TTDSASLLSFKASISRDPSNLLATWNSS--TDHCTWHGVTCD 86 (1052)
Q Consensus 47 ~~d~~all~~k~~~~~~p~~~l~~W~~~--~~~C~w~gV~C~ 86 (1052)
.+|++||++||+++..||.+.+.+|+.+ ++||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 5799999999999987788899999977 799999999996
No 478
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.95 E-value=8.1e-11 Score=123.09 Aligned_cols=112 Identities=30% Similarity=0.342 Sum_probs=68.1
Q ss_pred hcCCCceEEEccCcccccc----cccccCCCCCCCEEEccCCcCCCC----CchhhcCcccCcEEEcCCCccCCcCchhh
Q 001562 529 LDCVQLVEFEAANNQISGS----IAAGVGKLMKLQRLDLRGNRVSGS----LPDELGKLKFLKWILLGGNNLTGEIPSQF 600 (1052)
Q Consensus 529 ~~~~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 600 (1052)
..++.|+++.+..|.|... ....|..+++|+.|||+.|.++.. +.+.+..+++|++|++++|.+...-...|
T Consensus 182 ~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~ 261 (382)
T KOG1909|consen 182 QSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAF 261 (382)
T ss_pred HhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHH
Confidence 4456788888888887522 224566777888888888877742 34556677777777777777764333322
Q ss_pred -----cCCcCCcEEEcCCCCCCCC----CcchhcccccccceeccCCcC
Q 001562 601 -----GHLISLVVLDLSHNALTGS----IPASLTKATKLESLFLAHNRL 640 (1052)
Q Consensus 601 -----~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l 640 (1052)
...++|+.|.|.+|.|+.. +-..+...+.|+.|+|++|++
T Consensus 262 ~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 262 VDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 2356677777777776621 112233345555555555555
No 479
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.94 E-value=1.7e-10 Score=123.88 Aligned_cols=62 Identities=21% Similarity=0.366 Sum_probs=32.0
Q ss_pred CCCCccEEeCCCCcccccCC--ccccccCCCCEEeCCCCcCccCCCCC-C--CCCccceEecccCccc
Q 001562 352 ESCSLKVLNLGQNSLKGAVP--KSLGMCRNLTYLDLSLNNLEGYLPMQ-L--PVPCMVYFNVSQNNIT 414 (1052)
Q Consensus 352 ~~~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~-~--~~~~L~~L~ls~N~l~ 414 (1052)
++.+|+...|.+.... ..+ .....|++++.||||+|-|....|.. + ++|+|+.|+|+.|++.
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~ 185 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLS 185 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhccccccccc
Confidence 3445566666666554 222 24455666666666666655432210 0 2556666666666553
No 480
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.89 E-value=7.6e-09 Score=109.51 Aligned_cols=142 Identities=19% Similarity=0.231 Sum_probs=108.7
Q ss_pred ceeeecCceEEEEEEecCCeEEEEEEeccCch-hhHHHHHHHHHHhccCCcC--ceeeEEEEEecC---CeEEEEEeecC
Q 001562 781 NLIGTGGFGSTYKAELVPGYLVAVKKLSIGRF-QGIQQFDAEIGTLGRIRHK--NLVTLIGYYVGE---AEMFLVYNFLS 854 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~---~~~~lv~e~~~ 854 (1052)
+.|+.|.++.||+++..+|+.+++|....... ....++..|+++++.+++. .+.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999887668899998765432 1346788999999999753 456677776653 25689999999
Q ss_pred CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 001562 855 GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSC----------------------------------------- 893 (1052)
Q Consensus 855 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~----------------------------------------- 893 (1052)
|.++.+.+.. ..++.++...++.++++++.+||+..
T Consensus 84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 9888775431 23667777778888888888887521
Q ss_pred ------------CCCeeecCCCCCCEEECC--CCcEEEEecccccc
Q 001562 894 ------------VPRIVHRDIKPSNILLDE--ELNAYLSDFGLARL 925 (1052)
Q Consensus 894 ------------~~~iiHrDik~~Nill~~--~~~~kl~Dfgla~~ 925 (1052)
...++|+|+.+.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 66789999998863
No 481
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.88 E-value=2.6e-10 Score=132.16 Aligned_cols=244 Identities=26% Similarity=0.287 Sum_probs=115.4
Q ss_pred CCCCCCeeEecCCCceecCCCCccCCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCccccCCCCCcEE
Q 001562 121 KLTELRTLSVPHNSFSGEIPAGVGELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGNGELSVI 200 (1052)
Q Consensus 121 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 200 (1052)
.+..++.+++..|.+. .+-..+..+++|+.|++.+|+|. .+...+..+++|++|+|++|.|+...
T Consensus 70 ~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~------------- 134 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE------------- 134 (414)
T ss_pred HhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc-------------
Confidence 3444555555555555 22233555555666666666655 23333455555555555555555222
Q ss_pred EccCCcccCccccCCCcccCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcCCCccccccchh-hhcCCCCCEEEccCCC
Q 001562 201 DMSSNRLSGGLAIDSSSECEFLTYLKLSDNFLTESIPKEIGKCRNLKNLLLDGNILEGSIPKE-IGTISELKVLDVSRNS 279 (1052)
Q Consensus 201 ~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~ 279 (1052)
.+..++.|+.|++++|.|+.. ..+..+.+|+.+++++|++...-+ . ...+.+|+.+++..|.
T Consensus 135 --------------~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~ 197 (414)
T KOG0531|consen 135 --------------GLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNS 197 (414)
T ss_pred --------------chhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCc
Confidence 222333344445555544421 223334555555555555542222 1 3444555555555555
Q ss_pred CCCCCCcccccCCCCCeeecccCcccccCCCCCCccccccCCCchhhhccc--CCcEeecCCCCCcccCCccccCCCCcc
Q 001562 280 LTDRIPVELADCSKLSVLVLTNIDASLDLDNSRGEFSAFDGGVPYELLLSR--SLEVLWAPRANLGGRLPDNWSESCSLK 357 (1052)
Q Consensus 280 l~~~~p~~l~~l~~L~~L~L~~n~~~~~l~~~~~~~~~~~~~~p~~~~~~~--~L~~L~l~~n~l~~~~p~~~~~~~~L~ 357 (1052)
+.. ...+..+..+..+++.+|.++.. .|- + ... .|+.+++++|.+.... ..+..+..+.
T Consensus 198 i~~--i~~~~~~~~l~~~~l~~n~i~~~-----------~~l-~----~~~~~~L~~l~l~~n~i~~~~-~~~~~~~~l~ 258 (414)
T KOG0531|consen 198 IRE--IEGLDLLKKLVLLSLLDNKISKL-----------EGL-N----ELVMLHLRELYLSGNRISRSP-EGLENLKNLP 258 (414)
T ss_pred hhc--ccchHHHHHHHHhhcccccceec-----------cCc-c----cchhHHHHHHhcccCcccccc-cccccccccc
Confidence 542 12223333333333333332210 000 0 001 2455555556555331 3455566777
Q ss_pred EEeCCCCcccccCCccccccCCCCEEeCCCCcCccC---CCC--CCCCCccceEecccCccccCC
Q 001562 358 VLNLGQNSLKGAVPKSLGMCRNLTYLDLSLNNLEGY---LPM--QLPVPCMVYFNVSQNNITGVL 417 (1052)
Q Consensus 358 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~--~~~~~~L~~L~ls~N~l~~~~ 417 (1052)
.|++++|++... ..+...+.+..+.+..|++... ... ....+.+..+.+..|.+....
T Consensus 259 ~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (414)
T KOG0531|consen 259 VLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKIS 321 (414)
T ss_pred ccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCcccccc
Confidence 777777777632 2233445666667777776532 111 223456666666666665543
No 482
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.87 E-value=1.6e-09 Score=122.59 Aligned_cols=245 Identities=21% Similarity=0.208 Sum_probs=174.5
Q ss_pred hhCCCcccceeeecCceEEEEEEec--CCeEEEEEEeccCchhhHHH--HHHHHHHhccC-CcCceeeEEEEEecCCeEE
Q 001562 773 ATGNFSIRNLIGTGGFGSTYKAELV--PGYLVAVKKLSIGRFQGIQQ--FDAEIGTLGRI-RHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 773 ~~~~~~~~~~Lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 847 (1052)
...+|..+..||.|.|+.|++...+ ++..|++|...........+ -..|+.+...+ .|.++++.+..+......|
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 4457888999999999999998543 57788999775543332222 24566666666 5888998888888778888
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC-CcEEEEeccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE-LNAYLSDFGLARLL 926 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~-~~~kl~Dfgla~~~ 926 (1052)
+=-||+++++........ ..+++..++++..|++.++.++|+. .++|+|++|.||++..+ +..++.|||.+..+
T Consensus 343 ip~e~~~~~s~~l~~~~~--~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVTS--QMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred CchhhhcCcchhhhhHHH--HhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccccccc
Confidence 889999999887776332 4678888999999999999999999 99999999999999986 78899999988632
Q ss_pred cccccccccCcccccccc--ccccccCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcccCCCCcchHHHHHHHHHhCCcc
Q 001562 927 EVSETHATTDVAGTFGYV--APEYATTCRVSDKADVYSFGVVLLELISGKRSLDPSFSEYGNGFNIVSWAKLLIKEGRSS 1004 (1052)
Q Consensus 927 ~~~~~~~~~~~~g~~~y~--aPE~~~~~~~~~~sDv~slG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1052)
.... .......+++ +++......+..+.|+||||.-+.|.+++..--. ... +|.. ++.+...
T Consensus 418 ~~~~----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~-~~~---------~~~~--i~~~~~p 481 (524)
T KOG0601|consen 418 AFSS----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE-SGV---------QSLT--IRSGDTP 481 (524)
T ss_pred ceec----ccccccccccccchhhccccccccccccccccccccccccCcccCc-ccc---------ccee--eeccccc
Confidence 1111 1111223444 5555566778889999999999999998874322 111 1111 1111111
Q ss_pred ccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 001562 1005 ELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVKQVLIKL 1048 (1052)
Q Consensus 1005 ~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~eil~~L 1048 (1052)
. .......++.+.+.+..+++..||.+.+.....
T Consensus 482 -----~-----~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 482 -----N-----LPGLKLQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred -----C-----CCchHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence 1 112225577888899999999999988876543
No 483
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.80 E-value=5.1e-10 Score=129.70 Aligned_cols=219 Identities=25% Similarity=0.240 Sum_probs=144.9
Q ss_pred CcCcCCeEecccccccccCCccccCCCCCcEEEccCCcccCccccCC-CcccCCCCEEEccCCcCCCCCCcccCCCCCCC
Q 001562 169 NLERLRVLNLSFNSFSGEVPRGLIGNGELSVIDMSSNRLSGGLAIDS-SSECEFLTYLKLSDNFLTESIPKEIGKCRNLK 247 (1052)
Q Consensus 169 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 247 (1052)
.+..++.+++..|.+. .+-..+..+.+|+.|++..|+|.. ... +..+++|++|++++|.|+... .+..++.|+
T Consensus 70 ~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~---i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~ 143 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEK---IENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLK 143 (414)
T ss_pred HhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhh---cccchhhhhcchheecccccccccc--chhhccchh
Confidence 3344445555555554 233345555666666666666654 122 567889999999999998653 467788899
Q ss_pred EEEcCCCccccccchhhhcCCCCCEEEccCCCCCCCCC-cccccCCCCCeeecccCcccccCCCCCCccccccCCCchhh
Q 001562 248 NLLLDGNILEGSIPKEIGTISELKVLDVSRNSLTDRIP-VELADCSKLSVLVLTNIDASLDLDNSRGEFSAFDGGVPYEL 326 (1052)
Q Consensus 248 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~n~~~~~l~~~~~~~~~~~~~~p~~~ 326 (1052)
.|++++|.|+. ...+..+++|+.+++++|++...-+ . ...+.+++.+.+.+|.+... ..+
T Consensus 144 ~L~l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i----------------~~~ 204 (414)
T KOG0531|consen 144 ELNLSGNLISD--ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI----------------EGL 204 (414)
T ss_pred hheeccCcchh--ccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc----------------cch
Confidence 99999999983 3455568999999999999996544 2 58888999999998776521 112
Q ss_pred hcccCCcEeecCCCCCcccCCccccCCCCccEEeCCCCcccccCCccccccCCCCEEeCCCCcCccCCCCCCCCCccceE
Q 001562 327 LLSRSLEVLWAPRANLGGRLPDNWSESCSLKVLNLGQNSLKGAVPKSLGMCRNLTYLDLSLNNLEGYLPMQLPVPCMVYF 406 (1052)
Q Consensus 327 ~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L 406 (1052)
.....+..+++..|.+...-+-....+..|+.+++++|++. .++..+..+.++..|++.+|++...-. .-..+.+..+
T Consensus 205 ~~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~~-~~~~~~~~~~ 282 (414)
T KOG0531|consen 205 DLLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLEG-LERLPKLSEL 282 (414)
T ss_pred HHHHHHHHhhcccccceeccCcccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccccc-ccccchHHHh
Confidence 22334444566777776554322222223788888888888 454677778888888888888875422 1123455566
Q ss_pred ecccCccc
Q 001562 407 NVSQNNIT 414 (1052)
Q Consensus 407 ~ls~N~l~ 414 (1052)
....|.+.
T Consensus 283 ~~~~~~~~ 290 (414)
T KOG0531|consen 283 WLNDNKLA 290 (414)
T ss_pred ccCcchhc
Confidence 66666654
No 484
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.79 E-value=1.3e-07 Score=104.39 Aligned_cols=168 Identities=22% Similarity=0.329 Sum_probs=129.4
Q ss_pred CceEEEEEE-ecCCeEEEEEEeccCchhhHHHHHHHHHHhccCCcCceeeEEEEEe----cCCeEEEEEeecCC-CCHHH
Q 001562 787 GFGSTYKAE-LVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRIRHKNLVTLIGYYV----GEAEMFLVYNFLSG-GNLET 860 (1052)
Q Consensus 787 ~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~lv~e~~~~-gsL~~ 860 (1052)
-..+.|++. ..+|..|++|++...+......-..-++.++++.|+|+|++.+++. .+...++||+|.++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 345788984 4579999999996555444434456688999999999999999987 34578999999876 47777
Q ss_pred HHhhc-------------cCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 861 FIHKK-------------SGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 861 ~l~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
+-... .+...++..++.++.|+..||.++|+. |...+-+.+++|+++.+.+++|...|....+.
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeec
Confidence 54321 134567899999999999999999999 99999999999999999999998888765543
Q ss_pred ccccccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCC
Q 001562 928 VSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKR 975 (1052)
Q Consensus 928 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~ 975 (1052)
.... |-+.+ -.+-|.=.+|.++..+.||..
T Consensus 445 ~d~~---------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 445 EDPT---------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCCC---------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 2220 11111 236799999999999999964
No 485
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.78 E-value=3.4e-09 Score=86.15 Aligned_cols=59 Identities=39% Similarity=0.531 Sum_probs=29.7
Q ss_pred CCCEEEccCCcCCCCCchhhcCcccCcEEEcCCCccCCcCchhhcCCcCCcEEEcCCCC
Q 001562 557 KLQRLDLRGNRVSGSLPDELGKLKFLKWILLGGNNLTGEIPSQFGHLISLVVLDLSHNA 615 (1052)
Q Consensus 557 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 615 (1052)
+|++|++++|+|+...++.|.++++|++|++++|+++...|+.|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44455555555554444455555555555555555554444445555555555555554
No 486
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.78 E-value=2.5e-09 Score=126.72 Aligned_cols=250 Identities=23% Similarity=0.306 Sum_probs=175.7
Q ss_pred HhhCCCcccceeeecCceEEEEEEec-CCeEEEEEEeccC---chhhHHHHHHHHHHhccCCcCceeeEEEEEecCCeEE
Q 001562 772 RATGNFSIRNLIGTGGFGSTYKAELV-PGYLVAVKKLSIG---RFQGIQQFDAEIGTLGRIRHKNLVTLIGYYVGEAEMF 847 (1052)
Q Consensus 772 ~~~~~~~~~~~Lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 847 (1052)
...+.+.+.+.+-+|.++.++-+.-. .|...+.|..... .....+....+-.+.-..++|.+++....+.-....+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 45567888889999999999988432 2433344433221 1112223333334444445677776666655567889
Q ss_pred EEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 848 LVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 848 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
++++|..+++|..-++... ..+.+........+..+.+|||.. .+.|||++|.|.+...++..+++|||......
T Consensus 881 L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred hhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccc
Confidence 9999999999999988753 455555666777888999999998 79999999999999999999999998444331
Q ss_pred cc---c---------------------------cccccCccccccccccccccCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 001562 928 VS---E---------------------------THATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELISGKRSL 977 (1052)
Q Consensus 928 ~~---~---------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~slG~il~elltg~~p~ 977 (1052)
.. . ........+|+.|.+||...+......+|.|+.|++++|.++|.+||
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 10 0 01123456899999999999999999999999999999999999999
Q ss_pred CCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 001562 978 DPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTCTVETLSTRPSVK 1042 (1052)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~ 1042 (1052)
....++.. .+.+ ... ..-|...+.......++++.+.+..+|.+|-.+.
T Consensus 1036 na~tpq~~--------f~ni-----~~~---~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1036 NAETPQQI--------FENI-----LNR---DIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCcchhhh--------hhcc-----ccC---CCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 86655411 1111 110 0113334455556688899999999999998765
No 487
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.77 E-value=1.2e-07 Score=101.73 Aligned_cols=140 Identities=17% Similarity=0.142 Sum_probs=100.5
Q ss_pred ceeeecCceEEEEEEecCCeEEEEEEeccCchh-----------hHHHHHHHHHHhccCCcCce--eeEEEEEec-----
Q 001562 781 NLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQ-----------GIQQFDAEIGTLGRIRHKNL--VTLIGYYVG----- 842 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~----- 842 (1052)
+.+-+.....|+++++. |+.|.||+....... ....+.+|...+.++...+| .+.+++...
T Consensus 28 e~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 34444444557777664 788999977443311 11246788888888743332 344445432
Q ss_pred CCeEEEEEeecCCC-CHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECC-------CCc
Q 001562 843 EAEMFLVYNFLSGG-NLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDE-------ELN 914 (1052)
Q Consensus 843 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~-------~~~ 914 (1052)
...-++|+|++++. +|.+++........+......++.+++..+..||.. ||+|+|++++|||++. +..
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCce
Confidence 23578999999876 899998643223456677788999999999999999 9999999999999975 467
Q ss_pred EEEEeccccc
Q 001562 915 AYLSDFGLAR 924 (1052)
Q Consensus 915 ~kl~Dfgla~ 924 (1052)
+.++||+.+.
T Consensus 184 ~~LIDl~r~~ 193 (268)
T PRK15123 184 LSVIDLHRAQ 193 (268)
T ss_pred EEEEECCccc
Confidence 9999999885
No 488
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.74 E-value=5.5e-09 Score=84.88 Aligned_cols=60 Identities=48% Similarity=0.569 Sum_probs=32.9
Q ss_pred CCcEEEcCCCCCCCCCcchhcccccccceeccCCcCCCCCCcccccccccCeEecccCcC
Q 001562 605 SLVVLDLSHNALTGSIPASLTKATKLESLFLAHNRLSGEIPVSFSTLVNLSALDLSFNNL 664 (1052)
Q Consensus 605 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 664 (1052)
+|++|++++|+|+...+..|.++++|++|++++|+|+...|..|..+++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455555555555543334555555555555555555555555555555555555555543
No 489
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.73 E-value=8.5e-08 Score=96.66 Aligned_cols=125 Identities=26% Similarity=0.311 Sum_probs=83.8
Q ss_pred EEEEEEecCCeEEEEEEeccCch-------------h-------------hHHHHHHHHHHhccCCcCc--eeeEEEEEe
Q 001562 790 STYKAELVPGYLVAVKKLSIGRF-------------Q-------------GIQQFDAEIGTLGRIRHKN--LVTLIGYYV 841 (1052)
Q Consensus 790 ~V~~~~~~~~~~vavK~~~~~~~-------------~-------------~~~~~~~E~~~l~~l~h~n--iv~l~~~~~ 841 (1052)
.||.|...+|..+|+|+.+.... . ......+|++.|.++..-+ +.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999888899999998743210 0 0234677999999997653 45555442
Q ss_pred cCCeEEEEEeecC--CCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHH-HHhcCCCCeeecCCCCCCEEECCCCcEEEE
Q 001562 842 GEAEMFLVYNFLS--GGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAY-LHYSCVPRIVHRDIKPSNILLDEELNAYLS 918 (1052)
Q Consensus 842 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~-Lh~~~~~~iiHrDik~~Nill~~~~~~kl~ 918 (1052)
..++||||++ |..+..+.... ++.+....++.+++..+.. +|.. ||+|+|+.+.||+++++ .+.|+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEEE
Confidence 3489999998 55555443322 2244566778888886666 4677 99999999999999988 99999
Q ss_pred eccccccc
Q 001562 919 DFGLARLL 926 (1052)
Q Consensus 919 Dfgla~~~ 926 (1052)
|||.+...
T Consensus 149 Df~qav~~ 156 (188)
T PF01163_consen 149 DFGQAVDS 156 (188)
T ss_dssp -GTTEEET
T ss_pred ecCcceec
Confidence 99998754
No 490
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.69 E-value=6e-07 Score=96.63 Aligned_cols=261 Identities=17% Similarity=0.157 Sum_probs=158.7
Q ss_pred CcccceeeecCceEEEEEEecCCeEEEEEEeccCchhhHHHHHHHHHHhccC-CcCceeeEEEEE------e-cCCeEEE
Q 001562 777 FSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQGIQQFDAEIGTLGRI-RHKNLVTLIGYY------V-GEAEMFL 848 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~------~-~~~~~~l 848 (1052)
....+.||+|+.+.+|-..-- ...+.|++.........+. +..|... .||-+-.-+.+= . .+....+
T Consensus 13 i~~gr~LgqGgea~ly~l~e~--~d~VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 13 IPPGRPLGQGGEADLYTLGEV--RDQVAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred cCCCccccCCccceeeecchh--hchhheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 345678999999999976222 1235676655443332332 3333343 455443312210 1 1223567
Q ss_pred EEeecCCC-CHHHHHh----hccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEecccc
Q 001562 849 VYNFLSGG-NLETFIH----KKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLA 923 (1052)
Q Consensus 849 v~e~~~~g-sL~~~l~----~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla 923 (1052)
.|..+++- ...++.. +.......|+..++++..++.+.+.||+. |.+-+|+.++|+|+.+++.|.+.|-+.-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccce
Confidence 77776553 2333332 12234578999999999999999999999 9999999999999999999999987654
Q ss_pred ccccccccccccCcccccccccccccc-----CCCCCchhHHHHHHHHHHHHHhC-CCCCCCCcccCCCCcchHHHHHHH
Q 001562 924 RLLEVSETHATTDVAGTFGYVAPEYAT-----TCRVSDKADVYSFGVVLLELISG-KRSLDPSFSEYGNGFNIVSWAKLL 997 (1052)
Q Consensus 924 ~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDv~slG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~ 997 (1052)
..-. ........+|...|++||.-. +..-+...|-|.+|+++++++.| +.||.+-....... .-.| .-
T Consensus 165 qi~~--ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap-~p~E---~~ 238 (637)
T COG4248 165 QINA--NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAP-NPLE---TD 238 (637)
T ss_pred eecc--CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCC-Ccch---hh
Confidence 4322 222333457889999999765 33445678999999999999987 88886432111111 0011 01
Q ss_pred HHhCCccccccchh-----hcCCC-HHHHHHHHHHHHHcccCC--CCCCCCHHHHHHHHhcc
Q 001562 998 IKEGRSSELFLPEL-----WEAGP-QENLLGMMRLASTCTVET--LSTRPSVKQVLIKLKQL 1051 (1052)
Q Consensus 998 ~~~~~~~~~~~~~l-----~~~~~-~~~~~~l~~Li~~cl~~d--P~~RPs~~eil~~L~~i 1051 (1052)
+..+.....-+... ....| .-.+..++.+..+|+... +.-||+++.++..|..+
T Consensus 239 Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 239 IAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred hhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 11111111111000 00111 122345778888888764 45799999998877654
No 491
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.68 E-value=7.5e-09 Score=127.69 Aligned_cols=126 Identities=29% Similarity=0.347 Sum_probs=75.3
Q ss_pred CCCeeEecCCC--ceecCCCCccCCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCccccCCCCCcEEE
Q 001562 124 ELRTLSVPHNS--FSGEIPAGVGELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGNGELSVID 201 (1052)
Q Consensus 124 ~L~~L~L~~n~--l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 201 (1052)
.|++|-+..|. +....++.|..++.|++|||++|.=-+.+|..+++|-+|++|+|++..++ .+|..+.++.+|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 56677777665 44223334666777777777776655667777777777777777777776 6777777777777777
Q ss_pred ccCCcccCccccCCCcccCCCCEEEccCCcC--CCCCCcccCCCCCCCEEEc
Q 001562 202 MSSNRLSGGLAIDSSSECEFLTYLKLSDNFL--TESIPKEIGKCRNLKNLLL 251 (1052)
Q Consensus 202 L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l--~~~~~~~~~~l~~L~~L~L 251 (1052)
+..+.-...+ ......+++|++|.+..-.. ++..-..+..+.+|+.+..
T Consensus 625 l~~~~~l~~~-~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~ 675 (889)
T KOG4658|consen 625 LEVTGRLESI-PGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSI 675 (889)
T ss_pred cccccccccc-cchhhhcccccEEEeeccccccchhhHHhhhcccchhhhee
Confidence 7766544323 33444566777776655432 2222233444444444444
No 492
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.66 E-value=1.4e-07 Score=97.05 Aligned_cols=136 Identities=24% Similarity=0.242 Sum_probs=101.9
Q ss_pred CcccceeeecCceEEEEEEecCCeEEEEEEeccCchh----------------------hHHHHHHHHHHhccCCcC--c
Q 001562 777 FSIRNLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQ----------------------GIQQFDAEIGTLGRIRHK--N 832 (1052)
Q Consensus 777 ~~~~~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~h~--n 832 (1052)
..+...||.|.-+.||.|....|.++|||.-+....+ .....++|.+.|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 4567899999999999999989999999954322110 123457799999998644 5
Q ss_pred eeeEEEEEecCCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCC
Q 001562 833 LVTLIGYYVGEAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEE 912 (1052)
Q Consensus 833 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~ 912 (1052)
|.+.+++ +...+|||+++|..|...- ++.+....++..|++-+...... ||||+|+++-||+++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~d 238 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTED 238 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecC
Confidence 5555553 5679999999886664421 23444556667777777766667 99999999999999999
Q ss_pred CcEEEEeccccccc
Q 001562 913 LNAYLSDFGLARLL 926 (1052)
Q Consensus 913 ~~~kl~Dfgla~~~ 926 (1052)
|.+.++||-.+...
T Consensus 239 g~~~vIDwPQ~v~~ 252 (304)
T COG0478 239 GDIVVIDWPQAVPI 252 (304)
T ss_pred CCEEEEeCcccccC
Confidence 99999999887643
No 493
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.61 E-value=2.7e-08 Score=122.93 Aligned_cols=88 Identities=28% Similarity=0.419 Sum_probs=56.0
Q ss_pred hhhCCCCCCeeEecCCCceecCCCCccCCCCccEEEccCccccccCCccccCcCcCCeEecccccccccCCccccCCCCC
Q 001562 118 SIAKLTELRTLSVPHNSFSGEIPAGVGELRLLEVLELQGNNFSGKIPYQMSNLERLRVLNLSFNSFSGEVPRGLIGNGEL 197 (1052)
Q Consensus 118 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 197 (1052)
.|..++.|++|||++|.=-+.+|..+++|-+|++|+|+++.++ .+|..+++|.+|.+||+..+.-...+|.....+++|
T Consensus 566 ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~L 644 (889)
T KOG4658|consen 566 FFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSL 644 (889)
T ss_pred HHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccc
Confidence 3555666666666666555566666666666666666666666 666666666666666666665544455555556666
Q ss_pred cEEEccCCc
Q 001562 198 SVIDMSSNR 206 (1052)
Q Consensus 198 ~~L~L~~N~ 206 (1052)
++|.+..-.
T Consensus 645 r~L~l~~s~ 653 (889)
T KOG4658|consen 645 RVLRLPRSA 653 (889)
T ss_pred cEEEeeccc
Confidence 666665443
No 494
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.54 E-value=1.9e-08 Score=91.30 Aligned_cols=131 Identities=21% Similarity=0.268 Sum_probs=83.4
Q ss_pred ceEEEccCccccccccc---ccCCCCCCCEEEccCCcCCCCCchhh-cCcccCcEEEcCCCccCCcCchhhcCCcCCcEE
Q 001562 534 LVEFEAANNQISGSIAA---GVGKLMKLQRLDLRGNRVSGSLPDEL-GKLKFLKWILLGGNNLTGEIPSQFGHLISLVVL 609 (1052)
Q Consensus 534 L~~L~l~~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 609 (1052)
+-.++|++++|. .+++ .+.....|+..+|++|.+.. .|..| .+.+.++.|+|++|+|+ .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 344555555544 2222 23334456666777777773 44444 34457777788888877 677778888888888
Q ss_pred EcCCCCCCCCCcchhcccccccceeccCCcCCCCCCcccccccccCeEecccCcCCCCCC
Q 001562 610 DLSHNALTGSIPASLTKATKLESLFLAHNRLSGEIPVSFSTLVNLSALDLSFNNLSGHIP 669 (1052)
Q Consensus 610 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 669 (1052)
+++.|.+. ..|..+..|.+|-.|+..+|.+. .+|..+---++.-..++.++++.+..+
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETK 163 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCc
Confidence 88888877 66777777788888888888777 555443333344455567777776555
No 495
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.53 E-value=6.7e-09 Score=94.15 Aligned_cols=104 Identities=28% Similarity=0.369 Sum_probs=62.1
Q ss_pred CCEEEccCCcCCCCCchhhc---CcccCcEEEcCCCccCCcCchhhcC-CcCCcEEEcCCCCCCCCCcchhcccccccce
Q 001562 558 LQRLDLRGNRVSGSLPDELG---KLKFLKWILLGGNNLTGEIPSQFGH-LISLVVLDLSHNALTGSIPASLTKATKLESL 633 (1052)
Q Consensus 558 L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 633 (1052)
+..++|++++|. .+++... +...|+..+|++|.+. .+|..|.. .+.++.|+|++|+|+ .+|..+..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 445666666654 4444333 3344555566666666 45554543 346666666666666 566666666666666
Q ss_pred eccCCcCCCCCCcccccccccCeEecccCcCC
Q 001562 634 FLAHNRLSGEIPVSFSTLVNLSALDLSFNNLS 665 (1052)
Q Consensus 634 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 665 (1052)
+++.|++. ..|..+..|.+|..||..+|.+.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 66666666 55666666666666666666554
No 496
>PRK09902 hypothetical protein; Provisional
Probab=98.45 E-value=1.9e-06 Score=87.10 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=103.7
Q ss_pred eecCceEEEEEEecCCeEEEEEEeccCc------hhhHHHHHHHHHHhccCCcCc--eeeEEEEEe-c----CCeEEEEE
Q 001562 784 GTGGFGSTYKAELVPGYLVAVKKLSIGR------FQGIQQFDAEIGTLGRIRHKN--LVTLIGYYV-G----EAEMFLVY 850 (1052)
Q Consensus 784 g~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~-~----~~~~~lv~ 850 (1052)
|+||-+.|++.+.. |..+-+|+-.... .-....|.+|...+.++...+ +.+.+ ++. . ....++|+
T Consensus 27 ~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 67888999998776 4468888764211 224578999999999985322 34444 322 1 23468999
Q ss_pred eecCC-CCHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCc--EEEEecccccc
Q 001562 851 NFLSG-GNLETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELN--AYLSDFGLARL 925 (1052)
Q Consensus 851 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~--~kl~Dfgla~~ 925 (1052)
|-+++ .+|.+++....-.+.+......+..+++..++-||.. |+.|+|+.++||+++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 98743 5999998765444567888889999999999999999 9999999999999986666 99999987763
No 497
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.36 E-value=1.1e-07 Score=109.24 Aligned_cols=150 Identities=19% Similarity=0.268 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHhcCCCCeeecCCCCCCEEECCCCcEEEEeccccccccccccccccC--------ccccccccccccccC
Q 001562 880 IDIAQALAYLHYSCVPRIVHRDIKPSNILLDEELNAYLSDFGLARLLEVSETHATTD--------VAGTFGYVAPEYATT 951 (1052)
Q Consensus 880 ~~i~~~l~~Lh~~~~~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~--------~~g~~~y~aPE~~~~ 951 (1052)
.+++.|+.|+|... ++||++|.|++|.+++.+.+||+.|+.+........+.... ..-...|.|||++.+
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 45569999999874 89999999999999999999999999987665422111110 123457999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHhCCCC-CCCCcccCCCCcchHHHHHHHHHhCCccccccchhhcCCCHHHHHHHHHHHHHc
Q 001562 952 CRVSDKADVYSFGVVLLELISGKRS-LDPSFSEYGNGFNIVSWAKLLIKEGRSSELFLPELWEAGPQENLLGMMRLASTC 1030 (1052)
Q Consensus 952 ~~~~~~sDv~slG~il~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~Li~~c 1030 (1052)
...+.++|+||+|+++|.+..|+.+ +...... ...+... ..... -...++...+.++.+=+.++
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~-----~~~~~~~---~~~~~-------~~~~~s~~~p~el~~~l~k~ 248 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGL-----LSYSFSR---NLLNA-------GAFGYSNNLPSELRESLKKL 248 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCc-----chhhhhh---ccccc-------ccccccccCcHHHHHHHHHH
Confidence 8889999999999999999954444 3321111 0011000 00000 01122344556688888899
Q ss_pred ccCCCCCCCCHHHHHH
Q 001562 1031 TVETLSTRPSVKQVLI 1046 (1052)
Q Consensus 1031 l~~dP~~RPs~~eil~ 1046 (1052)
+..++..||++.++..
T Consensus 249 l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 249 LNGDSAVRPTLDLLLS 264 (700)
T ss_pred hcCCcccCcchhhhhc
Confidence 9999999998777654
No 498
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.35 E-value=3e-06 Score=86.62 Aligned_cols=152 Identities=22% Similarity=0.239 Sum_probs=101.1
Q ss_pred chhhHHHhhCCCcccce---eeecCceEEEEEEecCCeEEEEEEeccCchhh------------------------HHHH
Q 001562 766 TYDNVVRATGNFSIRNL---IGTGGFGSTYKAELVPGYLVAVKKLSIGRFQG------------------------IQQF 818 (1052)
Q Consensus 766 ~~~~~~~~~~~~~~~~~---Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------------------------~~~~ 818 (1052)
+.+.+.....+..+... |..|.-+.||+|...++..+|||+++.....- ....
T Consensus 36 t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~ 115 (268)
T COG1718 36 TLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWA 115 (268)
T ss_pred HHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHH
Confidence 44555555555555554 55677779999988889999999986432110 1123
Q ss_pred HHHHHHhccCC--cCceeeEEEEEecCCeEEEEEeecCCCC-HHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001562 819 DAEIGTLGRIR--HKNLVTLIGYYVGEAEMFLVYNFLSGGN-LETFIHKKSGKKIQWSVIHKIAIDIAQALAYLHYSCVP 895 (1052)
Q Consensus 819 ~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~gs-L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~ 895 (1052)
.+|+..|+++. +-.+.+-+++. ...+||||+.... -.-.|. ..++...+...+..++++.+.-|...+
T Consensus 116 ~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~Lk---Dv~~e~~e~~~~~~~~v~~~~~l~~~a-- 186 (268)
T COG1718 116 RKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLK---DVPLELEEAEGLYEDVVEYMRRLYKEA-- 186 (268)
T ss_pred HHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcc---cCCcCchhHHHHHHHHHHHHHHHHHhc--
Confidence 45777777763 33333444433 3489999994431 111111 122333467778889999999888733
Q ss_pred CeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 896 RIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 896 ~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
++||+|++.-|||+. ++.+.|+|+|.|....
T Consensus 187 ~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 187 GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred CcccccchhhheEEE-CCeEEEEECccccccC
Confidence 999999999999999 7799999999997553
No 499
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.35 E-value=1.1e-05 Score=93.69 Aligned_cols=140 Identities=24% Similarity=0.274 Sum_probs=94.6
Q ss_pred ceeeecCceEEEEEEecCCeEEEEEEeccCchhh----------------------------------------HHHHHH
Q 001562 781 NLIGTGGFGSTYKAELVPGYLVAVKKLSIGRFQG----------------------------------------IQQFDA 820 (1052)
Q Consensus 781 ~~Lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~~~ 820 (1052)
+.|+.++-|.||+|++.+|+.||||+.+..-.+. .-++..
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 6789999999999999999999999875432111 012344
Q ss_pred HHHHhccCC-----cCceeeEEEEEecCCeEEEEEeecCCCCHHHHHhhccCCCccHHHHHHHHHHHHHH-HHHHHhcCC
Q 001562 821 EIGTLGRIR-----HKNLVTLIGYYVGEAEMFLVYNFLSGGNLETFIHKKSGKKIQWSVIHKIAIDIAQA-LAYLHYSCV 894 (1052)
Q Consensus 821 E~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~-l~~Lh~~~~ 894 (1052)
|...+.+++ .+.+.--.-+++-.+...++|||++|..+.+...... ...+... ++..++++ +..+-..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~---ia~~~~~~f~~q~~~d-- 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKE---LAELLVRAFLRQLLRD-- 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHH---HHHHHHHHHHHHHHhc--
Confidence 555555552 3333222222333567899999999999998854333 3455333 33333332 2223333
Q ss_pred CCeeecCCCCCCEEECCCCcEEEEecccccccc
Q 001562 895 PRIVHRDIKPSNILLDEELNAYLSDFGLARLLE 927 (1052)
Q Consensus 895 ~~iiHrDik~~Nill~~~~~~kl~Dfgla~~~~ 927 (1052)
|++|.|..|.||++..+|.+.+.|||+...+.
T Consensus 285 -gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 285 -GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred -CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 99999999999999999999999999987554
No 500
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.34 E-value=3.9e-06 Score=87.13 Aligned_cols=106 Identities=25% Similarity=0.371 Sum_probs=83.2
Q ss_pred HHHHHHHHHhccCCcCc--eeeEEEEEecC----CeEEEEEeecCCC-CHHHHHhhccCCCccHHHHHHHHHHHHHHHHH
Q 001562 816 QQFDAEIGTLGRIRHKN--LVTLIGYYVGE----AEMFLVYNFLSGG-NLETFIHKKSGKKIQWSVIHKIAIDIAQALAY 888 (1052)
Q Consensus 816 ~~~~~E~~~l~~l~h~n--iv~l~~~~~~~----~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~ 888 (1052)
....+|...+.++.... +.+.+++.+.. ...++|+|++++. +|.+++.... ..+......++.+++..++-
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLIAK 133 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHHHH
Confidence 45677888777774332 34555555432 2458999999874 8999997643 25667788899999999999
Q ss_pred HHhcCCCCeeecCCCCCCEEECCCC---cEEEEeccccccc
Q 001562 889 LHYSCVPRIVHRDIKPSNILLDEEL---NAYLSDFGLARLL 926 (1052)
Q Consensus 889 Lh~~~~~~iiHrDik~~Nill~~~~---~~kl~Dfgla~~~ 926 (1052)
||+. ||+|+|+++.|||++.+. .+.++||+-++..
T Consensus 134 lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 134 LHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999 999999999999999887 7999999987743
Done!