Your job contains 1 sequence.
>001564
MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ
PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH
PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM
AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV
LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML
MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG
LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD
GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL
CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH
FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN
VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVK
LTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFAR
NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK
RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLE
MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI
NFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001564
(1052 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2012300 - symbol:PHYA "phytochrome A" species:... 4438 0. 1
UNIPROTKB|P06593 - symbol:PHYA3 "Phytochrome A type 3" sp... 3575 0. 1
TAIR|locus:2165199 - symbol:PHYC "phytochrome C" species:... 2741 2.6e-285 1
TAIR|locus:2005515 - symbol:PHYB "AT2G18790" species:3702... 2735 1.1e-284 1
TAIR|locus:2005535 - symbol:PHYD "phytochrome D" species:... 2724 1.6e-283 1
TAIR|locus:2005536 - symbol:PHYE "phytochrome E" species:... 2340 8.0e-243 1
UNIPROTKB|Q55168 - symbol:cph1 "Phytochrome-like protein ... 590 1.4e-56 1
UNIPROTKB|Q4K656 - symbol:bphP "Bacteriophytochrome histi... 419 1.0e-36 3
UNIPROTKB|Q7CY45 - symbol:Atu1990 "Bacteriophytochrome pr... 416 1.7e-35 2
UNIPROTKB|Q48G81 - symbol:bphP "Bacteriophytochrome histi... 394 2.0e-34 2
ASPGD|ASPL0000049609 - symbol:fphA species:162425 "Emeric... 343 1.8e-27 3
UNIPROTKB|G4MU11 - symbol:MGG_12377 "Phytochrome-1" speci... 325 4.0e-24 4
UNIPROTKB|Q55434 - symbol:cph2 "Phytochrome-like protein ... 156 1.2e-05 2
TIGR_CMR|SO_4445 - symbol:SO_4445 "response regulator/sen... 138 4.2e-05 1
TIGR_CMR|CPS_4117 - symbol:CPS_4117 "sensor histidine kin... 132 0.00015 1
TIGR_CMR|GSU_1285 - symbol:GSU_1285 "sensory box sensor h... 130 0.00019 1
UNIPROTKB|Q1D8M1 - symbol:MXAN_2785 "Sensory box histidin... 131 0.00022 1
TIGR_CMR|SPO_0094 - symbol:SPO_0094 "sensory box sensor h... 125 0.00054 2
UNIPROTKB|P16497 - symbol:kinA "Sporulation kinase A" spe... 93 0.00085 2
TIGR_CMR|GSU_2314 - symbol:GSU_2314 "sensory box histidin... 115 0.00098 2
>TAIR|locus:2012300 [details] [associations]
symbol:PHYA "phytochrome A" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009638 "phototropism" evidence=IMP]
[GO:0009630 "gravitropism" evidence=RCA;IMP] [GO:0016604 "nuclear
body" evidence=IDA] [GO:0010161 "red light signaling pathway"
evidence=IMP] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA;IMP] [GO:0009640 "photomorphogenesis"
evidence=IMP] [GO:0031516 "far-red light photoreceptor activity"
evidence=IMP] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010017 "red or far-red light signaling pathway" evidence=RCA]
[GO:0009883 "red or far-red light photoreceptor activity"
evidence=TAS] [GO:0010201 "response to continuous far red light
stimulus by the high-irradiance response system" evidence=IMP]
[GO:0010203 "response to very low fluence red light stimulus"
evidence=IMP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524
GO:GO:0005737 GO:GO:0016020 GO:GO:0006355 GO:GO:0017148
GO:GO:0046685 GO:GO:0016607 GO:GO:0006351 GO:GO:0009640
GO:GO:0009630 EMBL:AC003970 GO:GO:0023014 GO:GO:0018298
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
GO:GO:0016604 GO:GO:0010161 GO:GO:0010201 GO:GO:0009638
GO:GO:0008020 GO:GO:0017006 EMBL:X17341 EMBL:L21154 EMBL:AY039520
IPI:IPI00535033 IPI:IPI00891850 PIR:A33473 PIR:D86229
RefSeq:NP_001117256.1 RefSeq:NP_172428.1 UniGene:At.22828
ProteinModelPortal:P14712 SMR:P14712 IntAct:P14712
MINT:MINT-1174780 STRING:P14712 PaxDb:P14712 PRIDE:P14712
EnsemblPlants:AT1G09570.1 GeneID:837483 KEGG:ath:AT1G09570
TAIR:At1g09570 HOGENOM:HOG000272703 InParanoid:P14712 KO:K12120
OMA:RWGGAKH PhylomeDB:P14712 ProtClustDB:CLSN2679275
Genevestigator:P14712 GermOnline:AT1G09570 GO:GO:0031516
GO:GO:0010203 Uniprot:P14712
Length = 1122
Score = 4438 (1567.3 bits), Expect = 0., P = 0.
Identities = 851/1056 (80%), Positives = 934/1056 (88%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENA ELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHC+TS KPFYAI+HRVTGS+II
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIII 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXXGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+ GD T PQ
Sbjct: 301 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+EL+ Q++EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYHM
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHM 480
Query: 477 DSTGLSADSXXXXXXXXXXXXXXVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DS VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 481 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 601 YSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 661 IGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAFVNLGIVLN A++ QDPEKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TA+KRLKAL
Sbjct: 841 FFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKAL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXX 956
AY KRQIRNPLSGI+F+RKM+EGTELG EQ+R+L TSA CQ+QL K
Sbjct: 901 AYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGC 960
Query: 957 XXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
EM EFTLNEVL AS SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+++NF P+GGQL VS+SL KDQLG+SVHLA LE+R
Sbjct: 1021 LMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIR 1056
>UNIPROTKB|P06593 [details] [associations]
symbol:PHYA3 "Phytochrome A type 3" species:4498 "Avena
sativa" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003018 InterPro:IPR000014 InterPro:IPR001294
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR012129
InterPro:IPR013515 InterPro:IPR013516 InterPro:IPR013654
InterPro:IPR013767 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF00989 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245 PROSITE:PS50046
PROSITE:PS50112 SMART:SM00065 SMART:SM00091 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0006351 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 GO:GO:0000160 GO:GO:0008020
EMBL:X03242 EMBL:M18822 PIR:A29631 ProteinModelPortal:P06593
IntAct:P06593 Gramene:P06593 GO:GO:0017006 Uniprot:P06593
Length = 1129
Score = 3575 (1263.5 bits), Expect = 0., P = 0.
Identities = 678/1060 (63%), Positives = 833/1060 (78%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MSSSRPA SSS+ + ARV+AQTT+DA+L+A++E SG SFDYS V QQ
Sbjct: 1 MSSSRPASSSSSRNRQSSQARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQ 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
RS++V AYL HIQKGKLIQ FGCLLALDEK+F VIA+SENAPE+LT V+HAVPSV D
Sbjct: 61 GRSEKVI-AYLQHIQKGKLIQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDP 119
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
P LGIG++++++F+ A+AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++
Sbjct: 120 PRLGIGTNVRSLFSDQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVV 179
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKP E P TAAGALQSYKLAAKAI+++QSLP GSME LC+T+++EVF+LTGYDRVM
Sbjct: 180 DFEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVM 239
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEV SEITK GLEPYLGLHYPATDIPQAAR LFMKNKVRMI DCRAR +KV
Sbjct: 240 AYKFHEDDHGEVFSEITKPGLEPYLGLHYPATDIPQAARLLFMKNKVRMICDCRARSIKV 299
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXX--GDNTLP--- 355
++ E LPFD++LCGS LRAPHSCHLQYMENMNSIASLVMAVVVN+ ++ P
Sbjct: 300 IEAEALPFDISLCGSALRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQ 359
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QK+K+LWGL+VCH+ +PR+VPFPLRYACEFLAQVFA+HVN+E ELE Q+ EKNIL+ QT+
Sbjct: 360 QKKKKLWGLLVCHHESPRYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTM 419
Query: 416 LCDMLMRDA-PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
L DML R+A PL IV+ +PNIMDLVKCDGAALLY K+WRL P + Q+HDI WLS+
Sbjct: 420 LSDMLFREASPLTIVSGTPNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDV 479
Query: 475 HMDSTGLSADSXXXXXXXXXXXXXXVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLS DS ++CGMA +I+ KD++FWFRS TA+E+RWGGAK++
Sbjct: 480 HRDSTGLSTDSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKND 539
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P + DD R+MHPR SFKAFLEVVK +SLPW DYEMDAIHSLQLILR D +
Sbjct: 540 PSDMDDSRRMHPRLSFKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREA- 598
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
S+ +++ DLK++G+ EL+AVTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD
Sbjct: 599 SLDNQIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVD 658
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
AIG+H LTLVEDSS+ V+RMLYLALQG+EE+ ++FE+KTHG K +D P+ L+VNACAS
Sbjct: 659 DAIGRHILTLVEDSSVPVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACAS 718
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLHD+VVGVCFVAQD+T K VMDKFTR+EGDYKAI+ NPNPLIPPIFG+DEFGWC EW
Sbjct: 719 RDLHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEW 778
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R+EV+DK+LL EVF ++ A C LKN++AFV+L +++N A++G++ EK P
Sbjct: 779 NAAMTKLTGWNRDEVLDKMLLGEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAP 838
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
FGFF R+GKY ECLL N+K + G +TGVFCF+ +ASHELQ AL VQ+ SEQT+LKRLK
Sbjct: 839 FGFFDRSGKYIECLLSANRKENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLK 898
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXX 954
A +Y + I NPLSG+++SRK ++ T+L EQ + +H C Q++K
Sbjct: 899 AFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITE 958
Query: 955 XXX--XXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVL 1012
EM EF L +V+VA++SQV++ KGIRI E+ M +++YGD +RLQQ+L
Sbjct: 959 KSSCLDLEMAEFLLQDVVVAAVSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQIL 1018
Query: 1013 ADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+DFL IS+ F P GG + +SS LTK+ +G+++HL LELR
Sbjct: 1019 SDFLFISVKFSPVGGSVEISSKLTKNSIGENLHLIDLELR 1058
>TAIR|locus:2165199 [details] [associations]
symbol:PHYC "phytochrome C" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0008020
"G-protein coupled photoreceptor activity" evidence=IEA]
[GO:0009584 "detection of visible light" evidence=IEA] [GO:0009585
"red, far-red light phototransduction" evidence=IEA] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0017006 "protein-tetrapyrrole linkage"
evidence=IEA] [GO:0018106 "peptidyl-histidine phosphorylation"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245 PROSITE:PS50046
PROSITE:PS50112 SMART:SM00065 SMART:SM00091 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016020 GO:GO:0006355
GO:GO:0006351 GO:GO:0023014 GO:GO:0018298 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
GO:GO:0008020 EMBL:AB005236 GO:GO:0017006 HOGENOM:HOG000272703
ProtClustDB:CLSN2679275 EMBL:X17343 EMBL:Z32538 IPI:IPI00516887
PIR:C33473 RefSeq:NP_198433.1 UniGene:At.97
ProteinModelPortal:P14714 SMR:P14714 IntAct:P14714 STRING:P14714
PaxDb:P14714 PRIDE:P14714 EnsemblPlants:AT5G35840.1 GeneID:833570
KEGG:ath:AT5G35840 TAIR:At5g35840 InParanoid:P14714 OMA:LYGDNLR
PhylomeDB:P14714 Genevestigator:P14714 GermOnline:AT5G35840
Uniprot:P14714
Length = 1111
Score = 2741 (969.9 bits), Expect = 2.6e-285, P = 2.6e-285
Identities = 536/1054 (50%), Positives = 729/1054 (69%)
Query: 3 SSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPR 62
SS ++S S +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P
Sbjct: 2 SSNTSRSCST--RSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIP- 58
Query: 63 SDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPV 122
S V+T YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+
Sbjct: 59 SSAVST-YLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREA 117
Query: 123 LGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182
L IG+D+K++F +P SAL+KA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID
Sbjct: 118 LTIGTDVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDL 177
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EPV P EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM Y
Sbjct: 178 EPVSPDEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVY 237
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFHED HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+Q
Sbjct: 238 KFHEDGHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQ 297
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXXGDNTLPQKRKRLW 362
D+ L ++L GSTLRAPH CH QYM NM S+ASLVM+V +N N Q + LW
Sbjct: 298 DKSLSQPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLW 357
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVVCH+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R
Sbjct: 358 GLVVCHHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFR 417
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
+AP+GIVTQSPNIMDLVKCDGAAL Y++ +W LGVTP + Q+ D++ W+ + H +TG +
Sbjct: 418 NAPIGIVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFT 477
Query: 483 ADSXXXXXXXXXXXXXXVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
+S +CGMAAV IS KD +FWFRS TA +++WGGA+H+P+++D G+
Sbjct: 478 TESLMESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GK 536
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD 602
+MHPRSSFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + + L D
Sbjct: 537 RMHPRSSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQEEHSKTV----VDVPLVD 592
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
+++ + EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK
Sbjct: 593 NRVQKVDELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVS 652
Query: 663 TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVV 722
LVED S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+
Sbjct: 653 DLVEDDSVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVL 712
Query: 723 GVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLT 782
GVCF+ QD+T QKT+ + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+
Sbjct: 713 GVCFIGQDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLS 772
Query: 783 GWKREEVIDKLLLAEVFGTN-MACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFAR 840
G KREEV++K+LL EVF T+ CC LK+ + L I N +SGQ + EK+ FGF+ R
Sbjct: 773 GIKREEVVNKILLGEVFTTDDYGCC-LKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHR 831
Query: 841 NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK 900
+G + E LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY +
Sbjct: 832 DGSFIEALLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLR 891
Query: 901 RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXE 960
++++P I F + ++ + L +QKRLL TS C+ QL K +
Sbjct: 892 HEVKDPEKAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELD 951
Query: 961 MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI 1020
EF L E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI
Sbjct: 952 CSEFGLQESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSI 1011
Query: 1021 NFVPNGGQLMVSSSLTK--DQLGQSVHLAYLELR 1052
F P L VS + + +G+ + LE R
Sbjct: 1012 RFTPALRGLCVSFKVIARIEAIGKRMKRVELEFR 1045
>TAIR|locus:2005515 [details] [associations]
symbol:PHYB "AT2G18790" species:3702 "Arabidopsis
thaliana" [GO:0004673 "protein histidine kinase activity"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009409 "response
to cold" evidence=IMP] [GO:0009649 "entrainment of circadian clock"
evidence=IMP] [GO:0009883 "red or far-red light photoreceptor
activity" evidence=IMP] [GO:0009638 "phototropism" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0009630
"gravitropism" evidence=RCA;IMP] [GO:0009687 "abscisic acid
metabolic process" evidence=IMP] [GO:0010029 "regulation of seed
germination" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0010617 "circadian regulation of calcium
ion oscillation" evidence=IMP] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IMP] [GO:0031347 "regulation of defense
response" evidence=IMP] [GO:0010148 "transpiration" evidence=IMP]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0015979 "photosynthesis" evidence=IMP] [GO:0006325 "chromatin
organization" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0010017 "red or far-red light signaling pathway"
evidence=RCA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0016604 "nuclear body"
evidence=IDA] [GO:0031516 "far-red light photoreceptor activity"
evidence=IDA] [GO:0031517 "red light photoreceptor activity"
evidence=IDA] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0010202 "response to low fluence red light stimulus"
evidence=IMP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 GO:GO:0006355 GO:GO:0016607 GO:GO:0009649
GO:GO:0009409 GO:GO:0006351 GO:GO:0010148 GO:GO:0009630
GO:GO:0009687 GO:GO:0023014 GO:GO:0018298 TIGRFAMs:TIGR00229
GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874 PROSITE:PS50109
GO:GO:0010029 GO:GO:0000160 GO:GO:0015979 GO:GO:0006325
GO:GO:0010161 EMBL:AC005724 GO:GO:0009867 GO:GO:0010374
GO:GO:0031347 GO:GO:0010617 GO:GO:0009638 GO:GO:0008020
GO:GO:0009883 eggNOG:COG4251 GO:GO:0017006 HOGENOM:HOG000272703
ProtClustDB:CLSN2679275 EMBL:X17342 EMBL:L09262 EMBL:AY466496
IPI:IPI00521343 PIR:B33473 RefSeq:NP_179469.1 UniGene:At.96
ProteinModelPortal:P14713 SMR:P14713 DIP:DIP-31742N IntAct:P14713
MINT:MINT-192399 STRING:P14713 PaxDb:P14713 PRIDE:P14713
ProMEX:P14713 EnsemblPlants:AT2G18790.1 GeneID:816394
KEGG:ath:AT2G18790 TAIR:At2g18790 InParanoid:P14713 KO:K12121
OMA:AVAYITK PhylomeDB:P14713 Genevestigator:P14713
GermOnline:AT2G18790 GO:GO:0010202 Uniprot:P14713
Length = 1172
Score = 2735 (967.8 bits), Expect = 1.1e-284, P = 1.1e-284
Identities = 535/1060 (50%), Positives = 724/1060 (68%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG S FDYS S++ +T G
Sbjct: 40 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 94
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 95 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTLE 152
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 153 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 212
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 213 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 272
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 273 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 332
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXXGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N G N +
Sbjct: 333 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 392
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 393 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 452
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 453 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 512
Query: 478 STGLSADSXXXXXXXXXXXXXXVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DS VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 513 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 572
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++K +
Sbjct: 573 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE-SEAAMNSKVVD 631
Query: 598 SKL--C-DLKIE-GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
+ C D+ E G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAELTGLSV
Sbjct: 632 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 691
Query: 654 DKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNAC 712
++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + ++VNAC
Sbjct: 692 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNAC 751
Query: 713 ASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCC 772
+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE C
Sbjct: 752 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 811
Query: 773 EWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEK 832
EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ GQD +K
Sbjct: 812 EWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGGQDTDK 868
Query: 833 VPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKR 892
PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR + +
Sbjct: 869 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 928
Query: 893 LKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXX 952
K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +
Sbjct: 929 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 988
Query: 953 XXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVL 1012
+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR+QQ+L
Sbjct: 989 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1048
Query: 1013 ADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
A+FL I + P+ + + S Q+ E R
Sbjct: 1049 AEFLLSIIRYAPSQEWVEIHLSQLSKQMADGFAAIRTEFR 1088
>TAIR|locus:2005535 [details] [associations]
symbol:PHYD "phytochrome D" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009883 "red
or far-red light photoreceptor activity" evidence=IGI] [GO:0010017
"red or far-red light signaling pathway" evidence=IGI;RCA]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
GO:GO:0006355 GO:GO:0006351 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874
PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160 EMBL:Z97340
EMBL:AL161543 GO:GO:0008020 GO:GO:0009883 GO:GO:0017006
HOGENOM:HOG000272703 ProtClustDB:CLSN2679275 EMBL:X76609
IPI:IPI00538270 PIR:B71429 RefSeq:NP_193360.1 UniGene:At.33095
ProteinModelPortal:P42497 SMR:P42497 IntAct:P42497 STRING:P42497
PaxDb:P42497 PRIDE:P42497 EnsemblPlants:AT4G16250.1 GeneID:827319
KEGG:ath:AT4G16250 TAIR:At4g16250 InParanoid:P42497 KO:K12122
OMA:INDIVEW PhylomeDB:P42497 ArrayExpress:P42497
Genevestigator:P42497 GermOnline:AT4G16250 Uniprot:P42497
Length = 1164
Score = 2724 (964.0 bits), Expect = 1.6e-283, P = 1.6e-283
Identities = 538/1059 (50%), Positives = 718/1059 (67%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG S FDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXXGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N G+ NT +
Sbjct: 337 VVQDDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSD 516
Query: 478 STGLSADSXXXXXXXXXXXXXXVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DS VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-- 595
KDDG++M+PRSSF+ FLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D +
Sbjct: 577 KDDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 596 -IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
+ D+ +GM+E+ AV EMVRLIETATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A+GK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DAMGKSLVRELIYKEYKETVDRLLSCALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXX 953
K LAY + I+NPLSG+ F+ ++E +L +QK+LL TS C++Q+ K
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 XXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
E EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>TAIR|locus:2005536 [details] [associations]
symbol:PHYE "phytochrome E" species:3702 "Arabidopsis
thaliana" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=IEA] [GO:0004673 "protein histidine kinase activity"
evidence=IEA;ISS] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008020 "G-protein coupled photoreceptor activity"
evidence=IEA;ISS] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0009585 "red, far-red light phototransduction"
evidence=IEA] [GO:0009881 "photoreceptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017006
"protein-tetrapyrrole linkage" evidence=IEA] [GO:0018106
"peptidyl-histidine phosphorylation" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0016246 "RNA interference"
evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR012129 InterPro:IPR013515 InterPro:IPR013516
InterPro:IPR013654 InterPro:IPR013767 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF00989 Pfam:PF01590 Pfam:PF02518
Pfam:PF08446 PIRSF:PIRSF000084 PRINTS:PR01033 PROSITE:PS00245
PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006355
GO:GO:0006351 EMBL:AL110123 GO:GO:0023014 GO:GO:0018298
TIGRFAMs:TIGR00229 GO:GO:0009585 GO:GO:0000155 Gene3D:3.30.565.10
SUPFAM:SSF55874 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0000160
EMBL:AL161548 UniGene:At.32943 UniGene:At.70995 GO:GO:0008020
GO:GO:0017006 HOGENOM:HOG000272703 EMBL:X76610 EMBL:AK221424
IPI:IPI00524548 PIR:S46313 RefSeq:NP_193547.4
ProteinModelPortal:P42498 SMR:P42498 IntAct:P42498 STRING:P42498
PaxDb:P42498 PRIDE:P42498 EnsemblPlants:AT4G18130.1 GeneID:827538
KEGG:ath:AT4G18130 TAIR:At4g18130 InParanoid:P42498 KO:K12123
OMA:LCLVNST Genevestigator:P42498 GermOnline:AT4G18130
Uniprot:P42498
Length = 1112
Score = 2340 (828.8 bits), Expect = 8.0e-243, P = 8.0e-243
Identities = 498/1059 (47%), Positives = 669/1059 (63%)
Query: 7 AQSSSNTGKSRHSARVIAQTTIDAKLHADFETS-GTSFDYSNSVRVSSTAGGDQQPRSDR 65
+ S+++ K + AQ ++DA L ADF S T ++ S V S + P D
Sbjct: 6 SSSAASNMKPQPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSVISPP--NHVP--DE 61
Query: 66 VTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV---GDHP- 121
TAYL +IQ+G L+QPFGCL+A++E +F+++ S+N+ + L +++ +PS G+
Sbjct: 62 HITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLLS--LPSTSHSGEFDK 119
Query: 122 VLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
V G IG D +T+FT S ++L KA F E+SLLNP+LVH +T+ KPFYAI+HR+ +++
Sbjct: 120 VKGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVM 179
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
D EP K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V LTGYDRVM
Sbjct: 180 DLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVM 239
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A VKV
Sbjct: 240 VYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKV 299
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXXGDNTLPQKRKR 360
+Q E+L L L STLRAPH CH QYM NM S+ASL +A+VV G ++ +
Sbjct: 300 VQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVK-----GKDS-----SK 349
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQTLLCDML
Sbjct: 350 LWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDML 409
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD-ST 479
+RD IVTQSP IMDLVKCDGAAL YK K W +GVTPN+ Q+ D+V+WL E H D ST
Sbjct: 410 LRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDST 469
Query: 480 GLSADSXXXXXXXXXXXXXXVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKD 539
GL+ DS VCG+AA S KD + WFRS TAS ++WGGAKH P +KD
Sbjct: 470 GLTTDSLVDAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKD 529
Query: 540 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSK 599
D +MHPRSSF AFLEV K+RSLPW+ E+DAIHSL+LI+R +F T S +
Sbjct: 530 DAGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF----TSSRPVLSGNGV 585
Query: 600 LCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGK 659
D EL + EMVR+IETAT PI VD G +NGWN K AE+TGL +A+GK
Sbjct: 586 ARDAN-----ELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGK 640
Query: 660 HFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDD---PITLIVNACASR 715
+V++ S ++ +L ALQG+EE+++ +++ G + D + ++VN+C SR
Sbjct: 641 SLADEIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSR 700
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
D +N++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE C EWN
Sbjct: 701 DYTENIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWN 760
Query: 776 PAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD-PEKVP 834
AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++G + PE
Sbjct: 761 AAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIAGDNVPESSL 817
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
FF + GKY E L NK + EG V F FLQ+ + E L L E + L
Sbjct: 818 VEFFNKEGKYIEASLTANKSTNIEGKVIRCFFFLQIINKE--SGLSCPELKESA--QSLN 873
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXX 954
L Y +++I+NPL+GI F+ K++E +E+ A Q++ L TS C++Q+
Sbjct: 874 ELTYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEE 933
Query: 955 XXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
E EF L +L ISQVM+ + ++ E AE+I + L GD ++LQ +LAD
Sbjct: 934 GKLQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILAD 993
Query: 1015 FLSISINFVP--N---GGQLMVSSSLTKDQLGQSVHLAY 1048
L +N P N G + L++D G+ +HL +
Sbjct: 994 LLRNIVNHAPFPNSWVGISISPGQELSRDN-GRYIHLQF 1031
>UNIPROTKB|Q55168 [details] [associations]
symbol:cph1 "Phytochrome-like protein cph1" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0004673 "protein
histidine kinase activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009585 "red, far-red light
phototransduction" evidence=IDA] [GO:0009639 "response to red or
far red light" evidence=IDA] [GO:0009883 "red or far-red light
photoreceptor activity" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IDA] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0046777 "protein
autophosphorylation" evidence=IDA] InterPro:IPR003018
InterPro:IPR000014 InterPro:IPR001294 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS00245 PROSITE:PS50046 PROSITE:PS50112 SMART:SM00065
SMART:SM00091 SMART:SM00387 SMART:SM00388 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0046777
GO:GO:0023014 GO:GO:0018298 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
GO:GO:0004673 GO:GO:0000160 EMBL:BA000022 GenomeReviews:BA000022_GR
BRENDA:2.7.13.3 GO:GO:0008020 GO:GO:0009883 PIR:S74389
RefSeq:NP_442237.1 RefSeq:YP_005652297.1 PDB:2VEA PDB:3ZQ5
PDBsum:2VEA PDBsum:3ZQ5 ProteinModelPortal:Q55168 IntAct:Q55168
STRING:Q55168 GeneID:12253516 GeneID:952560 KEGG:syn:slr0473
KEGG:syy:SYNGTS_2344 PATRIC:23842112 eggNOG:COG4251
HOGENOM:HOG000030537 KO:K11354 OMA:PESDIPQ ProtClustDB:CLSK893476
EvolutionaryTrace:Q55168 Uniprot:Q55168
Length = 748
Score = 590 (212.7 bits), Expect = 1.4e-56, P = 1.4e-56
Identities = 184/650 (28%), Positives = 301/650 (46%)
Query: 74 IQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIF 133
I LIQP G ++ L E + S N +L G P +G + +F
Sbjct: 20 IHTAHLIQPHGLVVVLQEPDLTISQISANCTGIL----------GRSPEDLLGRTLGEVF 69
Query: 134 TAPSASALQKALGFGEVSLLNPILVHCKTSGKPFY---AIVHRVT-GSLIIDFEPVKPYE 189
+ +Q L G++S LNP + + G F + HR + G L+ + EP +
Sbjct: 70 DSFQIDPIQSRLTAGQISSLNPSKLWARVMGDDFVIFDGVFHRNSDGLLVCELEPAYTSD 129
Query: 190 -VPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
+P L Y +A A+ RL+ ++ D +++EV +TG+DRVM Y+F E++
Sbjct: 130 NLPF-----LGFYHMANAALNRLRQ--QANLRDFYDVIVEEVRRMTGFDRVMLYRFDENN 182
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK----VLQDE 304
HG+V++E + +EPYLGLHYP +DIPQ AR LF+ N +R+I D V V
Sbjct: 183 HGDVIAEDKRDDMEPYLGLHYPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPST 242
Query: 305 KLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXXGDNTLPQKRKRLWGL 364
DLT S LR+ + CHL Y++NM ASL ++++ K LWGL
Sbjct: 243 NRAVDLT--ESILRSAYHCHLTYLKNMGVGASLTISLI--------------KDGHLWGL 286
Query: 365 VVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA 424
+ CH+ TP+ +PF LR ACEF +V +++ + + E + + +L D + A
Sbjct: 287 IACHHQTPKVIPFELRKACEFFGRVVFSNISAQEDTETFDYRVQLAEHEAVLLDKMTTAA 346
Query: 425 PL--GIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
G+ ++ L GAA+ + K+ +G TP++ + ++ WL + +
Sbjct: 347 DFVEGLTNHPDRLLGLTGSQGAAICFGEKLILVGETPDEKAVQYLLQWLENREVQDVFFT 406
Query: 483 ADSXXXXXXXXXXXXXXVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE--KDD 540
S V G+ A+ I+ + + WFR + V WGG + E ++D
Sbjct: 407 --SSLSQIYPDAVNFKSVASGLLAIPIARHNFLLWFRPEVLQTVNWGGDPNHAYEATQED 464
Query: 541 GR-KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQ-----LILRNAFKDVGTL--DLD 592
G+ ++HPR SF + E+V+ +SLPW+ E+ + +L+ LILR A +++ L +L+
Sbjct: 465 GKIELHPRQSFDLWKEIVRLQSLPWQSVEIQSALALKKAIVNLILRQA-EELAQLARNLE 523
Query: 593 TKSIH-SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVD----VDGLVNG---WNTK 644
+ K + ++E S V+L+E L D +D V G T
Sbjct: 524 RSNADLKKFAYIASHDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFAVTGVSLMQTL 583
Query: 645 IAE-LTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEI 693
I + LT VD + T V++ V + L Q EE + E+
Sbjct: 584 IDDILTYAKVDTQYAQLTFTDVQE----VVDKALANLKQRIEESGAEIEV 629
>UNIPROTKB|Q4K656 [details] [associations]
symbol:bphP "Bacteriophytochrome histidine kinase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000160
"phosphorelay signal transduction system" evidence=ISS] [GO:0009639
"response to red or far red light" evidence=ISS] [GO:0023014
"signal transduction by phosphorylation" evidence=ISS]
InterPro:IPR003018 InterPro:IPR000014 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013515 InterPro:IPR013654 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PRINTS:PR00344 PROSITE:PS50046 SMART:SM00065 SMART:SM00091
SMART:SM00387 SMART:SM00388 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0009639 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0018298 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 eggNOG:COG4251
HOGENOM:HOG000030537 OMA:NWLRIIP ProtClustDB:CLSK412238
RefSeq:YP_262277.1 ProteinModelPortal:Q4K656 STRING:Q4K656
GeneID:3479601 KEGG:pfl:PFL_5200 PATRIC:19879863
BioCyc:PFLU220664:GIX8-5240-MONOMER Uniprot:Q4K656
Length = 746
Score = 419 (152.6 bits), Expect = 1.0e-36, Sum P(3) = 1.0e-36
Identities = 127/490 (25%), Positives = 230/490 (46%)
Query: 104 PEL-LTMVNHAVPSVGDHPVLGI-GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCK 161
PEL + ++ V ++ P + G ++ + +++ L +S P+ H
Sbjct: 39 PELRIQQISANVEALLGQPAAQVLGQPLEQLLGDTDGQRIREVLQLPRLSDAPPL--HLA 96
Query: 162 TSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMER 221
+G F ++HR G L+++ E + P Q+ L + + RLQ+ + ++
Sbjct: 97 VNGARFEGLLHRHQGVLMLELEIQLEHLQPQHLKE--QTENLG-RLLRRLQT--AKTLNE 151
Query: 222 LCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFL 281
L + E+ +TGYDRV+ Y+F E+ HG+V++E T+ +E + GL +PA+DIPQ AR L
Sbjct: 152 LYAISVSEIQAMTGYDRVLIYRFEEEGHGQVIAEATRPTMEVFNGLFFPASDIPQQAREL 211
Query: 282 FMKNKVRMIVDCRARHVKVLQ----DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASL 337
+ N +R+I + + V +L D + DL+ +TLR+ H QYM+NM ++S+
Sbjct: 212 YRSNWLRIIPNADYQPVPLLPALRPDTQQALDLSF--ATLRSVSPIHCQYMKNMGVLSSM 269
Query: 338 VMAVVVNDXXXXGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVN-- 395
++++ D +LWGL+ C N P VP LR AC+ + QV ++ ++
Sbjct: 270 SISLLKGD--------------QLWGLISCGNRQPLLVPHELRIACQTIGQVLSLQISAM 315
Query: 396 KELELEYQILEKNILRTQTLLCDMLMRDAPLGI---VTQSPNIM-DLVKCDGAALLYKNK 451
+ L++ Q EK + +L D MRD P + + Q P ++ DL + G A++ +
Sbjct: 316 EALDISRQREEK-VTALASL--DQAMRDTPDSVFDGLAQVPQLLLDLTQAGGVAIIEDKQ 372
Query: 452 IWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSXXXXXXXXXXXXXXVVCGMAAVRI-S 510
+ G P ++ + WL + A V G+ A+ +
Sbjct: 373 LHCFGNCPPQDEIRALHRWLQG---TGQAVFASHHLANVYPPAASYQQVASGVLAMTLPK 429
Query: 511 PKDM-IFWFRSQTASEVRWGGAKHEP---DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKD 566
P D + WFR + + W G +P + D G ++ PR+SF+ + + S W
Sbjct: 430 PVDNGVLWFRPEVKENINWSGNPQKPLDLENSDAGLRLRPRTSFEIWKVEMAGISTKWSH 489
Query: 567 YEMDAIHSLQ 576
+ A + L+
Sbjct: 490 GDRFAANDLR 499
Score = 50 (22.7 bits), Expect = 1.0e-36, Sum P(3) = 1.0e-36
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 1004 DSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSV 1044
D RL QVL++ + +I F P G++ V + +Q+ SV
Sbjct: 637 DPERLFQVLSNLVGNAIKFTPKQGKVGVVAMSDGEQIVFSV 677
Score = 48 (22.0 bits), Expect = 1.0e-36, Sum P(3) = 1.0e-36
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 865 FCFLQLASHELQQALHVQRLSEQTALK-RLKALAYTKRQIRNPLSGIIFSRKMME 918
F L L+ L Q L EQ A++ R + +A +RNP++ I MM+
Sbjct: 493 FAANDLRRSALEHDLARQVLREQQAVRARDELVAVVSHDLRNPMTVISMLCGMMQ 547
>UNIPROTKB|Q7CY45 [details] [associations]
symbol:Atu1990 "Bacteriophytochrome protein" species:176299
"Agrobacterium fabrum str. C58" [GO:0004673 "protein histidine
kinase activity" evidence=TAS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009883 "red or far-red light
photoreceptor activity" evidence=TAS] [GO:0019922
"protein-chromophore linkage via peptidyl-cysteine" evidence=IDA]
InterPro:IPR003018 InterPro:IPR001294 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 SMART:SM00065 SMART:SM00387 SMART:SM00388
InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0023014 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0004673
GO:GO:0000160 EMBL:AE007869 GenomeReviews:AE007869_GR GO:GO:0008020
GO:GO:0009883 KO:K00936 eggNOG:COG4251 HOGENOM:HOG000030537
RefSeq:NP_354963.2 ProteinModelPortal:Q7CY45 STRING:Q7CY45
GeneID:1134028 KEGG:atu:Atu1990 PATRIC:20813753 OMA:PVHLQYM
GO:GO:0019922 Uniprot:Q7CY45
Length = 736
Score = 416 (151.5 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 125/415 (30%), Positives = 193/415 (46%)
Query: 172 HRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSG-SMERLCDTMIQEV 230
HR +G+L+I EV G + KL + + + L S S+E Q V
Sbjct: 95 HR-SGTLVI-------LEVEKAGVGE-SAEKLMGELTSLAKYLNSAPSLEDALFRTAQLV 145
Query: 231 FELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMI 290
++G+DR + Y F D G VV+E L YLGL +PA DIP AR L+ N++RMI
Sbjct: 146 SSISGHDRTLIYDFGLDWSGHVVAEAGSGALPSYLGLRFPAGDIPPQARQLYTINRLRMI 205
Query: 291 VDCRARHVKVLQDEKLPFD--LTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXX 348
D + V + + L + S LR+ HL+YM NM + AS+ +++VVN
Sbjct: 206 PDVDYKPVPIRPEVNAETGAVLDMSFSQLRSVSPVHLEYMRNMGTAASMSVSIVVNGA-- 263
Query: 349 XGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKN 408
LWGL+ CH+ TP V +R AC+F AQ+ ++ + E +
Sbjct: 264 ------------LWGLIACHHATPHSVSLAVREACDFAAQLLSMRIAMEQSSQDASRRVE 311
Query: 409 ILRTQT-LLCDMLMR----DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQ 463
+ Q LL M D LG + +++ V DGAAL+ + +G TP+ Q
Sbjct: 312 LGHIQARLLKGMAAAEKWVDGLLGGEGEREDLLKQVGADGAALVLGDDYELVGNTPSREQ 371
Query: 464 LHDIVSWLSEYHMDSTGLSADSXXXXXXXXXXXXXXVVCGMAAVRISPK--DMIFWFRSQ 521
+ +++ WL E + + A V G+ A+R+S + WFR +
Sbjct: 372 VEELILWLGEREI--ADVFATDNLAGNYPTAAAYASVASGIIAMRVSELHGSWLIWFRPE 429
Query: 522 TASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQ 576
VRWGG H+ + + GR +HPR SF+ + E ++ S PW + E+ A L+
Sbjct: 430 VIKTVRWGGDPHKTVQ-ESGR-IHPRKSFEIWKEQLRNTSFPWSEPELAAARELR 482
Score = 47 (21.6 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 80 IQPFGCLLALDEKTFKVIAYSEN 102
IQ G LL L + F V+ S+N
Sbjct: 22 IQEHGALLVLSAREFSVVQASDN 44
>UNIPROTKB|Q48G81 [details] [associations]
symbol:bphP "Bacteriophytochrome histidine kinase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0009639 "response to red or far red light"
evidence=ISS] [GO:0023014 "signal transduction by phosphorylation"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR003018 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013515 InterPro:IPR013654 InterPro:IPR016132
Pfam:PF00360 Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446
PRINTS:PR00344 PROSITE:PS50046 SMART:SM00065 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0009639 GO:GO:0005622 GO:GO:0018298
GO:GO:0000156 EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 eggNOG:COG4251
HOGENOM:HOG000030537 RefSeq:YP_275602.1 ProteinModelPortal:Q48G81
STRING:Q48G81 GeneID:3556653 KEGG:psp:PSPPH_3446 PATRIC:19976304
OMA:NWLRIIP ProtClustDB:CLSK412238 Uniprot:Q48G81
Length = 745
Score = 394 (143.8 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 127/497 (25%), Positives = 232/497 (46%)
Query: 97 IAYSENAPEL-LTMVNHAVPSVGDH-PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLN 154
+ ++ P L + V+ V SV H P +G + + A A ++ A
Sbjct: 32 LLFTLEEPNLTILQVSANVQSVLGHAPEHVLGKGLDHVLGAGWAEVIRSASAHDSFVDAQ 91
Query: 155 PILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSL 214
+L+ +G F A++HR G L+++ E + A A+ + L+ L
Sbjct: 92 RLLM--TVNGIEFEALMHRNQGVLVLELE------IQDKDAQAVSYTERTGNMGRMLRQL 143
Query: 215 PSGS-MERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATD 273
+ S ++ L + ++E+ +TGYDRV+ Y+F E+ HG+V++E + +E + GL +PA+D
Sbjct: 144 HAASDLQTLYEVSVREIQRMTGYDRVLIYRFEEEGHGQVIAEASAPSMELFNGLFFPASD 203
Query: 274 IPQAARFLFMKNKVRMIVDCRARHVKVLQ----DEKLPFDLTLCGSTLRAPHSCHLQYME 329
IP+ AR L+ +N +R+I D V ++ D + DL+ STLR+ H QYM+
Sbjct: 204 IPEQARELYRRNWLRIIPDADYTPVPLVPQLRPDTQQQLDLSF--STLRSVSPIHCQYMK 261
Query: 330 NMNSIASLVMAVVVNDXXXXGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQV 389
NM ++S+ ++++ +LWGL+ C + TP +V LR AC+ + QV
Sbjct: 262 NMGVLSSMSVSLIQGG--------------KLWGLISCGHRTPLYVSHELRSACQAIGQV 307
Query: 390 FAIHVN--KELELEYQILEKNILRTQTLLCDMLMRDAPL--GIVTQSPNIMDLVKCDGAA 445
++ ++ + LE+ Q E + + L M + + G+ Q +MDLV G A
Sbjct: 308 LSLQISAMEALEISRQ-REAKVRALEQLHQAMAESEENVFDGLAQQPQLLMDLVGATGVA 366
Query: 446 LLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSXXXXXXXXXXXXXXVVCGMA 505
++ + G P + + +W+ + A V G+
Sbjct: 367 IIEDRQTHCYGACPEVSDIRALHTWMIA---GGEPVYASHHLSSVYAPGEAYQPVASGVL 423
Query: 506 AVRI-SPKDM-IFWFRSQTASEVRWGGAKHEP---DEKDDGRKMHPRSSFKAFLEVVKTR 560
A+ + P D + WFRS+ V+W G ++P + + G ++ PR+SF+ + +V T
Sbjct: 424 AMNLPKPVDNGVIWFRSEVKESVQWSGDPNKPLNMESSEGGMRLRPRTSFEIW-KVEMTG 482
Query: 561 SLP-WKDYEMDAIHSLQ 576
P W ++ A + L+
Sbjct: 483 IAPKWSHGDVFAANDLR 499
Score = 61 (26.5 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 41/178 (23%), Positives = 70/178 (39%)
Query: 864 VFCFLQLASHELQQALHVQRLSEQTALK-RLKALAYTKRQIRNPLSGIIFSRKMMEGT-- 920
VF L L+ L Q EQ A++ R + +A +RNP++ I MM+ +
Sbjct: 492 VFAANDLRRSALENDLASQVRKEQQAVRARDELVAVVSHDLRNPMTVISMLCGMMQKSFS 551
Query: 921 ELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQ---V 977
G R + T+ +Q T + V+ I +
Sbjct: 552 SDGPHTSRRISTAIDTMQQAASRMNVLLEDLLDTSKIEAGRYTITPQPLEVSQIFEEAYT 611
Query: 978 MMKSNA--KGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
++ A K I I + AE + + D RL QVL++ + +I F P G++ V++
Sbjct: 612 LLAPLAMDKSIEI-SFNAEPDLK--VQADPERLFQVLSNLIGNAIKFTPKLGKIGVAA 666
>ASPGD|ASPL0000049609 [details] [associations]
symbol:fphA species:162425 "Emericella nidulans"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0004673 "protein
histidine kinase activity" evidence=IDA] [GO:0000909 "sporocarp
development involved in sexual reproduction" evidence=IMP]
[GO:0031517 "red light photoreceptor activity" evidence=IDA]
[GO:0010913 "regulation of sterigmatocystin biosynthetic process"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0071491
"cellular response to red light" evidence=IMP;IDA] [GO:1900198
"positive regulation of penicillin biosynthetic process"
evidence=IMP] [GO:0042318 "penicillin biosynthetic process"
evidence=IMP] [GO:1900376 "regulation of secondary metabolite
biosynthetic process" evidence=IMP] [GO:0000155 "phosphorelay
sensor kinase activity" evidence=IEA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008020 "G-protein coupled photoreceptor
activity" evidence=IEA] [GO:0009584 "detection of visible light"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] InterPro:IPR003018 InterPro:IPR001294
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR009082 InterPro:IPR013515 InterPro:IPR013654
InterPro:IPR016132 Pfam:PF00072 Pfam:PF00360 Pfam:PF00512
Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 PROSITE:PS50110 SMART:SM00065 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 EMBL:BN001307
GO:GO:0005622 GO:GO:0023014 EMBL:AACD01000168 GO:GO:0018298
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0008020 RefSeq:XP_682277.1
ProteinModelPortal:G5EB62 EnsemblFungi:CADANIAT00007846
GeneID:2868257 KEGG:ani:AN9008.2 HOGENOM:HOG000171704 OMA:KELTGFH
Uniprot:G5EB62
Length = 1280
Score = 343 (125.8 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
Identities = 115/421 (27%), Positives = 201/421 (47%)
Query: 171 VHRVTGSLIIDFEPVKPYEVPMTAAG---ALQSYKLAAKAITRLQSLPSGSMERLCDTMI 227
+ ++ GS I +P++ G A++ + + ++ +L + +ME L DT
Sbjct: 346 IEQMAGSTITINQPLRVLRRARRRKGEAAAMEVFSIVSQIQEQLAR--ADNMEALLDTTS 403
Query: 228 QEVFELTGYDRVMAYKFHEDDHGEVVSEITKS--GLEPYLGLHYPATDIPQAARFLFMKN 285
V ELTG+ R++ Y+F + +G+VVSE+ ++ + GLH+PA DIP+ AR L+ N
Sbjct: 404 GIVKELTGFHRILVYQFDSEFNGKVVSELVDPTMSIDLFKGLHFPAADIPKQARDLYRIN 463
Query: 286 KVRMIVD---CRARHV-KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAV 341
KVR++ D AR V + L+D + P D+T + LRA H++Y+ NM +S M++
Sbjct: 464 KVRLLYDRDHVTARLVCRALEDLETPLDMT--HAYLRAMSPIHIKYLANMQIRSS--MSI 519
Query: 342 VVNDXXXXGDNTLPQKRKRLWGLVVCHNTTPRF--VPFPLRYACEFLAQVFAIHVNKELE 399
+N D LWGL+ CH+ PR V FP+R C + + ++ + L
Sbjct: 520 SINSM---ND---------LWGLISCHSYGPRGMRVSFPIRKMCRLIGDTVSRNIER-LS 566
Query: 400 LEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTP 459
++ + ++ T + D + IV S +++ LV D AL + ++ L +P
Sbjct: 567 YASRLQARKLINT--VPTDA---NPSGYIVASSDDLLRLVDADYGALCIRGEVKILAKSP 621
Query: 460 NDFQLHDIVSWLSEYHMDSTGLSADSXXXXXXXXXXXXXXVVCGMAAVRISPK--DMIFW 517
++ ++ +L +S S + G+ V +S D I +
Sbjct: 622 QSQEMLALLEYLKVRKYNSVLTSNHIVKDFQDLNYPPGFKDISGLLYVPLSTDGLDFIVF 681
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FR +EV+WGG +E + +G + PR SF+ + E V R W + E+D L L
Sbjct: 682 FRRGQLTEVKWGGNPNEA-KFTEGH-LEPRKSFQTWRETVLDRCRDWTESEVDTAAVLCL 739
Query: 578 I 578
+
Sbjct: 740 V 740
Score = 66 (28.3 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
Identities = 26/143 (18%), Positives = 61/143 (42%)
Query: 886 EQTALKRLKALAYTKRQIRNPLSGII-FSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXX 944
E ++L +L LA + ++R PL+ I+ + +EG G + L + + + ++
Sbjct: 756 ESSSLTKL-LLANSAHEVRTPLNAIVNYLEIALEGALDGETRDHLSKSYSASKSLIYVIN 814
Query: 945 XXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGD 1004
+ F L + + ++ KG+ ++ + ET+ GD
Sbjct: 815 DLLDLTNVEKGQSLIKDEPFDLPTTFSEATAMFESEAKRKGLNY-KVLSQPGIPETVIGD 873
Query: 1005 SIRLQQVLADFLSISINFVPNGG 1027
R++Q +++ +S ++ +GG
Sbjct: 874 QRRVRQSISNLISNAVQNTSSGG 896
Score = 40 (19.1 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 80 IQPFGCLLALDEKTFK---VIAYSENAPELL 107
IQ FG L+A+ E+ + V SEN+ ++L
Sbjct: 206 IQSFGALVAVREEPGEQMVVRIVSENSQDIL 236
>UNIPROTKB|G4MU11 [details] [associations]
symbol:MGG_12377 "Phytochrome-1" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR003018 InterPro:IPR000014
InterPro:IPR001294 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR009082 InterPro:IPR013515
InterPro:IPR013654 InterPro:IPR016132 Pfam:PF00072 Pfam:PF00360
Pfam:PF00512 Pfam:PF01590 Pfam:PF02518 Pfam:PF08446 PRINTS:PR01033
PROSITE:PS50046 PROSITE:PS50110 PROSITE:PS50112 SMART:SM00065
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0023014 GO:GO:0018298 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 GO:GO:0043581 EMBL:CM001232
GO:GO:0008020 RefSeq:XP_003715418.1 ProteinModelPortal:G4MU11
EnsemblFungi:MGG_12377T0 GeneID:5050971 KEGG:mgr:MGG_12377
Uniprot:G4MU11
Length = 1523
Score = 325 (119.5 bits), Expect = 4.0e-24, Sum P(4) = 4.0e-24
Identities = 106/395 (26%), Positives = 188/395 (47%)
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
AGA+Q + + ++ +L + + ++E+ ++ V ELTG+ RVM Y+F + +G VV+
Sbjct: 463 AGAMQIFDIMSQVQEQLAT--ADNLEKFLKILVGIVSELTGFHRVMIYQFDSEFNGRVVT 520
Query: 255 EI--TKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC---RARHV-KVLQDEKLPF 308
E+ T + Y GLH+PA+DIP+ AR L+ NKVR++ D AR V + +D P
Sbjct: 521 ELVDTAQTRDLYKGLHFPASDIPKQARDLYKINKVRLLYDRDQPTARLVCRSTEDLDKPL 580
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDXXXXGDNTLPQKRKRLWGLVVCH 368
DLT S LRA HL+Y+ NM +S+ +++ D LWGL+ CH
Sbjct: 581 DLT--HSYLRAMSPIHLKYLNNMAVRSSMSISIKAFD--------------ELWGLIACH 624
Query: 369 NTTPRF--VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPL 426
+ PR V FP+R C + + ++ + L ++ + ++ T + D ++
Sbjct: 625 SYGPRGMRVSFPIRKMCRLVGDTASRNIER-LSYASRLQARKLINT--VPTD---KNPSG 678
Query: 427 GIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSX 486
IV S +++ L D A+ + + LG + ++ ++ +L S S D
Sbjct: 679 YIVASSDDLLKLFDADFGAVSIRGETKILGKPESTQEILVLLEYLRMKKFTSVLTSQDLT 738
Query: 487 XXXXXXXXXXXXXVVCGMAAVRISP--KDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK- 543
++ G+ V +S D I +FR +V+W G +E ++ +
Sbjct: 739 VDFADLRYAPGFQMIAGVLYVPLSVGGNDFIVFFRQGQVRQVKWAGNPYEKVVQEGTQHY 798
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
+ PR SFK + E V + W + +++ L L+
Sbjct: 799 LEPRKSFKVWHETVVGKCRDWSEEQVETAAVLCLV 833
Score = 53 (23.7 bits), Expect = 4.0e-24, Sum P(4) = 4.0e-24
Identities = 32/145 (22%), Positives = 61/145 (42%)
Query: 886 EQTALKRLKALAYTKRQIRNPLSGII-FSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXX 944
+ + L +L LA + ++R PL+ II + +EG+ L E + L S + L
Sbjct: 849 QSSKLTKL-LLANSAHEVRTPLNAIINYLEIALEGS-LDQETRDNLSKSHSASKSL--IY 904
Query: 945 XXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVM--MKSNAKGIRIVNETAEQI-MSETL 1001
E+++ + + L A I + S+AK I E E + +
Sbjct: 905 VINDLLDLTKAEEGQELIKDEIFD-LPACIHEATESFTSDAKRKGIGYEVIEHPGLPRAV 963
Query: 1002 YGDSIRLQQVLADFLSISINFVPNG 1026
YGD +++Q +A+ + ++ G
Sbjct: 964 YGDQRKVRQAVANVTANAVQHTSQG 988
Score = 47 (21.6 bits), Expect = 4.0e-24, Sum P(4) = 4.0e-24
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 80 IQPFGCLLAL--DEKTFKVIAY-SENAPELL 107
+Q FG L+AL DE ++ Y SEN +L
Sbjct: 290 VQGFGALVALAEDENGCHLVRYASENTKHIL 320
Score = 41 (19.5 bits), Expect = 4.0e-24, Sum P(4) = 4.0e-24
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 774 WNPAMV-KLTGWKREEVIDKLLLAEVFGTNMACCRLK 809
W+ +V K W E+V +L V+G + R K
Sbjct: 808 WHETVVGKCRDWSEEQVETAAVLCLVYGKFIEVWRQK 844
>UNIPROTKB|Q55434 [details] [associations]
symbol:cph2 "Phytochrome-like protein cph2" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0009585 "red,
far-red light phototransduction" evidence=TAS] [GO:0009883 "red or
far-red light photoreceptor activity" evidence=TAS] [GO:0018298
"protein-chromophore linkage" evidence=TAS] InterPro:IPR003018
InterPro:IPR001054 InterPro:IPR001294 InterPro:IPR013515
InterPro:IPR016132 Pfam:PF00360 Pfam:PF01590 PRINTS:PR01033
PROSITE:PS00245 PROSITE:PS50046 SMART:SM00065 Pfam:PF00990
Pfam:PF00563 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
SUPFAM:SSF55073 GO:GO:0018298 GO:GO:0016849 GO:GO:0009190
InterPro:IPR000160 SMART:SM00267 TIGRFAMs:TIGR00254 PROSITE:PS50887
Gene3D:3.20.20.450 InterPro:IPR001633 SMART:SM00052
SUPFAM:SSF141868 PROSITE:PS50883 EMBL:BA000022
GenomeReviews:BA000022_GR GO:GO:0008020 GO:GO:0009883 PIR:S75801
RefSeq:NP_442466.1 RefSeq:YP_005652527.1 ProteinModelPortal:Q55434
DIP:DIP-48801N IntAct:Q55434 STRING:Q55434 GeneID:12253839
GeneID:952361 KEGG:syn:sll0821 KEGG:syy:SYNGTS_2574 PATRIC:23842638
eggNOG:COG2203 KO:K02488 OMA:AIHQGEL ProtClustDB:CLSK2393495
Uniprot:Q55434
Length = 1276
Score = 156 (60.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 48/160 (30%), Positives = 77/160 (48%)
Query: 218 SMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSE-ITKSGLEPYLGLHYPATDIPQ 276
++ +++E G DRV YKF D GEV++E + ++ L LGLH+P DIP
Sbjct: 23 TLRETLQVIVEEARIFLGVDRVKIYKFASDGSGEVLAEAVNRAALPSLLGLHFPVEDIPP 82
Query: 277 AARFLFMKNKVRMI-VDCRARHVKV--LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNS 333
AR + N+ +MI VD R K L P + + SCH+QY+ M
Sbjct: 83 QAREE-LGNQRKMIAVDVAHRRKKSHELSGRISPTEHS--NGHYTTVDSCHIQYLLAMGV 139
Query: 334 IASLVMAVVVNDXXXXGDNTLPQKRKRLWGLVVCHNTTPR 373
++SL + V+ + ++LWG++ H++ PR
Sbjct: 140 LSSLTVPVMQD--------------QQLWGIMAVHHSKPR 165
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 532 KHEPDEKD-DGRKMHPRSSFKAFLEVVKTRSLP-WKDYE--MDAIHSLQLIL 579
KH ++ D R + PR SF+A+ E K +P W E + + S QL +
Sbjct: 367 KHWAGKRGIDRRNILPRLSFEAWEETQKL--VPTWNRSERKLAQVASTQLYM 416
Score = 37 (18.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 1031 VSSSLTKDQLGQSVH 1045
VS ++T+ QL + VH
Sbjct: 182 VSLAITQSQLSRQVH 196
Score = 37 (18.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 912 FSRKMMEGTELGAEQKRLLHTSAQCQRQLHK 942
F+ + E L +++ L T +Q RQ+H+
Sbjct: 167 FTEQEWETMALLSKEVSLAITQSQLSRQVHQ 197
>TIGR_CMR|SO_4445 [details] [associations]
symbol:SO_4445 "response regulator/sensor histidine kinase"
species:211586 "Shewanella oneidensis MR-1" [GO:0000155
"phosphorelay sensor kinase activity" evidence=ISS] [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001638 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR008207
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00497 Pfam:PF00512
Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110
SMART:SM00062 SMART:SM00073 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 GO:GO:0005524 GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0005215 GO:GO:0030288
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0023014
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 Gene3D:1.20.120.160
SUPFAM:SSF47226 RefSeq:NP_719966.1 ProteinModelPortal:Q8E948
GeneID:1172042 KEGG:son:SO_4445 PATRIC:23528543
HOGENOM:HOG000273173 OMA:AYIGNLH ProtClustDB:CLSK641032
Uniprot:Q8E948
Length = 1141
Score = 138 (53.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 46/175 (26%), Positives = 85/175 (48%)
Query: 875 LQQALHVQRLSEQTALKRLKA--LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHT 932
++ AL + + + + A KR KA LA +IR P++G++ + + T LG EQK+++
Sbjct: 544 VENALAIAKENAELATKR-KAEFLAAMSHEIRTPMNGLVGMAEQLSFTPLGIEQKQMVQI 602
Query: 933 -SAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNE 991
S + L E L EVL ++++ VM K + +
Sbjct: 603 ISNGAEEILQIINNILDFSKIDMGKMRLESTPILLREVLDSTLNMVMNDLRTKDLSLYLH 662
Query: 992 TAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHL 1046
+Q ++ + GDS+R++Q+L +++S +I F G + VS L ++ GQ + L
Sbjct: 663 V-DQGVAARVTGDSLRIKQILFNWVSNAIKFTERGF-IEVSVKLEAEEEGQQLLL 715
>TIGR_CMR|CPS_4117 [details] [associations]
symbol:CPS_4117 "sensor histidine kinase/response
regulator" species:167879 "Colwellia psychrerythraea 34H"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR008207 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF00672 Pfam:PF01627 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50885 PROSITE:PS50894 SMART:SM00073
SMART:SM00304 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 GO:GO:0016021 GO:GO:0005524 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0023014 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
Gene3D:1.20.120.160 SUPFAM:SSF47226 HOGENOM:HOG000272329 KO:K07678
OMA:ANQVISQ ProtClustDB:PRK11107 InterPro:IPR019247 Pfam:PF09984
RefSeq:YP_270772.1 ProteinModelPortal:Q47WQ0 STRING:Q47WQ0
DNASU:3518736 GeneID:3518736 KEGG:cps:CPS_4117 PATRIC:21471097
BioCyc:CPSY167879:GI48-4130-MONOMER Uniprot:Q47WQ0
Length = 948
Score = 132 (51.5 bits), Expect = 0.00015, P = 0.00015
Identities = 43/179 (24%), Positives = 87/179 (48%)
Query: 870 LASHELQQA-LHVQRLSEQTALKRLKA--LAYTKRQIRNPLSGII-FSRKMMEGTELGAE 925
L E+Q L + + Q A R+K+ LA ++R PL+G+I F+R++++ T L
Sbjct: 280 LEQFEIQNVELSISKRKAQEA-NRVKSEFLANMSHELRTPLNGVIGFTRQVLK-TPLTEN 337
Query: 926 QKRLLHT-SAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAK 984
Q+ L T L E + F+L E + +++ + ++ K
Sbjct: 338 QRDYLQTIDRSANNLLTIINDILDFSKLDAGKMVTENIPFSLRESIDETLTLLAPSAHKK 397
Query: 985 GIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQS 1043
I + + Q + ++L GD++R++Q++ + +S +I F P G V+ +T +++ Q+
Sbjct: 398 NIEL-SINLPQELPDSLVGDTMRIKQIITNLVSNAIKFTPQGS---VAVDITSEEISQN 452
>TIGR_CMR|GSU_1285 [details] [associations]
symbol:GSU_1285 "sensory box sensor histidine
kinase/response regulator" species:243231 "Geobacter sulfurreducens
PCA" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
SUPFAM:SSF47226 InterPro:IPR013656 Pfam:PF08448 RefSeq:NP_952338.1
PDB:2R78 PDBsum:2R78 ProteinModelPortal:Q74DN1 SMR:Q74DN1
GeneID:2688111 KEGG:gsu:GSU1285 PATRIC:22025341
HOGENOM:HOG000144300 OMA:AHTNSER
BioCyc:GSUL243231:GH27-1253-MONOMER EvolutionaryTrace:Q74DN1
Uniprot:Q74DN1
Length = 772
Score = 130 (50.8 bits), Expect = 0.00019, P = 0.00019
Identities = 64/303 (21%), Positives = 127/303 (41%)
Query: 727 VAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKR 786
+A+D++ +K M++ R ++ + + PL PI+ + G N A + TG R
Sbjct: 140 IARDVSERKR-MEESLRSTSEFLDTILDEAPL--PIYITSVDGTLRLANNAWERETGIPR 196
Query: 787 EEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAE 846
+ + L E+F M C +Q + +N +V + A + QD E + FG R +
Sbjct: 197 NAAVGRRL-NELFPAAM-C----DQFSEINRRVVESNATAVQD-EFLDFGAGVRVFHTIK 249
Query: 847 CLL--CVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIR 904
L +D G + ++ EL+ A H + A ++ LA +IR
Sbjct: 250 FPLRDAAGGVVDVGGISIDITDRSKMEG-ELRAA-HAAAVDSSRA--KIDFLANMSHEIR 305
Query: 905 NPLSGIIFSRKMMEGTELGAEQKRLLHTSAQ-CQRQLHKXXXXXXXXXXXXXXXXXEMVE 963
P++G+I + +++ T+L Q+ + + + L E V
Sbjct: 306 TPMNGVIGTLELLRETDLDPRQREYAEIARESAESMLAVINMVLDYSKIESHQLVLEAVP 365
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F + E + ++ + KG+ + + + ET+ GD +R Q++A+ + ++ F
Sbjct: 366 FAIREAVERAVKPFRAVAARKGVMVAADVPPHV-PETVVGDPVRFSQIVANLVGNAVKFT 424
Query: 1024 PNG 1026
G
Sbjct: 425 EQG 427
>UNIPROTKB|Q1D8M1 [details] [associations]
symbol:MXAN_2785 "Sensory box histidine kinase/response
regulator" species:246197 "Myxococcus xanthus DK 1622" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000014
InterPro:IPR000700 InterPro:IPR001789 InterPro:IPR003594
InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR009082
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00072 Pfam:PF00512
Pfam:PF00989 Pfam:PF02518 Pfam:PF08447 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113 SMART:SM00091
SMART:SM00387 SMART:SM00388 SMART:SM00448 InterPro:IPR005467
InterPro:IPR001610 GO:GO:0005524 GO:GO:0016020 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 EMBL:CP000113 GenomeReviews:CP000113_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 InterPro:IPR013656
Pfam:PF08448 RefSeq:YP_631002.1 ProteinModelPortal:Q1D8M1
IntAct:Q1D8M1 STRING:Q1D8M1 GeneID:4101404 KEGG:mxa:MXAN_2785
PATRIC:22648109 OMA:ATHLAVE BioCyc:MXAN246197:GIWU-2762-MONOMER
Uniprot:Q1D8M1
Length = 1077
Score = 131 (51.2 bits), Expect = 0.00022, P = 0.00022
Identities = 94/435 (21%), Positives = 174/435 (40%)
Query: 615 TSEMVRL-IETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG-KHFLTLVEDSSIDT 672
+ E +R+ + + ++ + + V W+ + + GL K+ K + ++
Sbjct: 426 SEERLRMALAAGQLGVVELQYERGVLSWDERALQHLGLPPGKSPTLKEAAARIHPDDVNR 485
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHG-SKINDDPITLIVNACASRDLHDNVVGVCFVAQDI 731
+R + AL+ E I+ E + G + + ++ ++ D VVG QD+
Sbjct: 486 ARRTIEQALRPGAEA-IRLECRVQGWDGVQRFLLAMVKTHFDAQGQPDRVVGAL---QDV 541
Query: 732 TPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW-NPAMVKLTGWKREEVI 790
T Q++ + R+ IV+ P G + W N A +L G +E I
Sbjct: 542 TEQRSAERERERLA----TIVEQS----PDFIGVGDPSGRAVWVNDAGRRLLGLGLDEDI 593
Query: 791 DKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYA---EC 847
+ L + F L + +V+ I G+ F F A
Sbjct: 594 TRYHLRDFF--------LAEDQTYVDEHIAAAILQGGRREGAFRFRHFPTGEPIAAQYHT 645
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASH---ELQQALHVQRLSEQTA--LKRLKA--LAYTK 900
V R+ + V ++ E ++ L +R++ + A RLK LA
Sbjct: 646 FALVEHDTQRQMGIATVGRDIRAQKRLEAERERLLARERVAREEAEEANRLKDEFLATVS 705
Query: 901 RQIRNPLSGIIFSRKMME-GTELGAEQKRLLHT---SAQCQRQLHKXXXXXXXXXXXXXX 956
++R PL+ ++ +M+ GT +++R L T +A+ Q QL +
Sbjct: 706 HELRTPLTAVLGWVQMLRTGTLPPEKRERALATVERNARAQGQLVEDLLDVSRIMTGKLK 765
Query: 957 XXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
V+ +++V+ A + + + AKGIRI A T+ GD RLQQV+ + L
Sbjct: 766 LDVSSVD--VSQVVEAVLESLRPAAEAKGIRI---QAALDSGGTIMGDVSRLQQVVWNLL 820
Query: 1017 SISINFVPNGGQLMV 1031
S ++ F P GG++ V
Sbjct: 821 SNAVKFTPKGGRVQV 835
>TIGR_CMR|SPO_0094 [details] [associations]
symbol:SPO_0094 "sensory box sensor histidine
kinase/response regulator" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112
PROSITE:PS50113 SMART:SM00091 SMART:SM00387 SMART:SM00388
SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0005622 GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 KO:K00936
RefSeq:YP_165368.1 ProteinModelPortal:Q5LWQ3 GeneID:3196418
KEGG:sil:SPO0094 PATRIC:23373425 HOGENOM:HOG000014353 OMA:ASTHEMC
ProtClustDB:CLSK933154 Uniprot:Q5LWQ3
Length = 743
Score = 125 (49.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 44/189 (23%), Positives = 80/189 (42%)
Query: 855 LDREGAVTGVFCF---LQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGII 911
LDR G V + A + ++ + +E+ A + + LA +IR P++G++
Sbjct: 325 LDRNGKVEVTVAIERDVTAAKAQAEELAAARVAAEEGARAKAEFLATMSHEIRTPMNGVV 384
Query: 912 FSRKMMEGTELGAEQKRLLHTSAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLV 971
+++ T+L EQ++ + T L E+ + V
Sbjct: 385 GMAELLSETKLSIEQRQYVDTIRSSSTAL-LAIINDILELSRLDARKMELHPVNFDPVSC 443
Query: 972 ASISQVMMK--SNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQL 1029
+ ++K + AKG+R+ ET + +YGD RL+QVL + L +I F GG
Sbjct: 444 VRDTMRLLKPQAQAKGLRLSLETGADV-PPLVYGDDGRLRQVLINLLGNAIKFTERGGVT 502
Query: 1030 MVSSSLTKD 1038
+ S +D
Sbjct: 503 LRLRSEAQD 511
Score = 50 (22.7 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 616 SEMVRLI-ETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
++++ L+ A ++ D +G + N TG S+D+A G++
Sbjct: 228 AQLLSLVARNANDSVILADSEGRIVWTNESFTRTTGYSLDEAKGRY 273
>UNIPROTKB|P16497 [details] [associations]
symbol:kinA "Sporulation kinase A" species:224308 "Bacillus
subtilis subsp. subtilis str. 168" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR000014 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 InterPro:IPR013767
Pfam:PF00512 Pfam:PF00989 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50112 PROSITE:PS50113 SMART:SM00091 SMART:SM00387
SMART:SM00388 InterPro:IPR005467 InterPro:IPR001610 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0030435 GO:GO:0023014
EMBL:AL009126 GenomeReviews:AL009126_GR SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
eggNOG:COG0642 BRENDA:2.7.13.3 EMBL:AJ222587 EMBL:M29450
EMBL:M31067 PIR:A33496 RefSeq:NP_389282.1 PDB:2VLG PDBsum:2VLG
ProteinModelPortal:P16497 SMR:P16497 DIP:DIP-58966N
EnsemblBacteria:EBBACT00000003684 GeneID:939230 KEGG:bsu:BSU13990
PATRIC:18974581 GenoList:BSU13990 HOGENOM:HOG000008904 KO:K02491
OMA:TQANLNG ProtClustDB:CLSK887211 BioCyc:BSUB:BSU13990-MONOMER
BindingDB:P16497 ChEMBL:CHEMBL3889 EvolutionaryTrace:P16497
Uniprot:P16497
Length = 606
Score = 93 (37.8 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 42/206 (20%), Positives = 88/206 (42%)
Query: 553 FLEVVKTRSLPWKDYEMDAIHS-LQLILRNAFKDVGTLDLDT--KSIHSKLCDLKIEGMK 609
F + K ++ W + ++ + + + R + L+ +T +S++ + +++ +
Sbjct: 77 FRFIKKDHTIVWVEAAVEIVTTRAERTEREIILKMKVLEEETGHQSLNCEKHEIEPASPE 136
Query: 610 ELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGL-SVDKAIGKHFLTLVEDS 668
+T + RL+E P L + V G + N+ + + G S D IGK +E+
Sbjct: 137 STTYITDDYERLVENLPSP-LCISVKGKIVYVNSAMLSMLGAKSKDAIIGKSSYEFIEEE 195
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
D VK + +G E I+ K +++ P+ L V A S ++ N +
Sbjct: 196 YHDIVKNRIIRMQKGMEVGMIEQTWK----RLDGTPVHLEVKA--SPTVYKNQQAELLLL 249
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQN 754
DI+ +K + Y+ ++QN
Sbjct: 250 IDISSRKKFQTILQKSRERYQLLIQN 275
Score = 79 (32.9 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 54/230 (23%), Positives = 99/230 (43%)
Query: 820 VLNKAMSGQDPEKVPFGFFARNGK--YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQ 877
+ N A + E V +F + Y E ++C+ E AV + L+ S E +Q
Sbjct: 328 IQNIAEQKTESEIVKQSWFTFQNRVIYTE-MVCIPTTFFGEAAVQVI---LRDIS-ERKQ 382
Query: 878 ALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQ 937
+ SE+ ++ A A +IRNPL+ I ++M+ T G E H
Sbjct: 383 TEELMLKSEKLSIAGQLA-AGIAHEIRNPLTAIKGFLQLMKPTMEGNE-----HYFDIVF 436
Query: 938 RQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVM-MKSNAKGIRIVNETAEQI 996
+L + + E+ + L+ +S ++ ++N GI I T+ +
Sbjct: 437 SELSRIELILSELLMLAKPQQNAVKEYLNLKKLIGEVSALLETQANLNGIFI--RTSYEK 494
Query: 997 MSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHL 1046
S + GD +L+QV + + ++ +P+GG V +T+D+ SVH+
Sbjct: 495 DSIYINGDQNQLKQVFINLIKNAVESMPDGGT--VDIIITEDE--HSVHV 540
>TIGR_CMR|GSU_2314 [details] [associations]
symbol:GSU_2314 "sensory box histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR000014 InterPro:IPR000700
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF01627 Pfam:PF02518 Pfam:PF13188
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50894 SMART:SM00073 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
Gene3D:1.20.120.160 SUPFAM:SSF47226 InterPro:IPR021796 Pfam:PF11845
HSSP:P06143 RefSeq:NP_953363.2 GeneID:2687347 KEGG:gsu:GSU2314
PATRIC:22027483 HOGENOM:HOG000144277 ProtClustDB:CLSK2306793
BioCyc:GSUL243231:GH27-2320-MONOMER Uniprot:Q74AN8
Length = 1025
Score = 115 (45.5 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 44/176 (25%), Positives = 74/176 (42%)
Query: 876 QQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKR---LLHT 932
++ L + +E + + LA +IR P++G+I ++ T L EQ+R ++ T
Sbjct: 497 EELLLAKEQAESANRAKSEFLANMSHEIRTPMNGVIGMTGLLLETGLADEQRRYAEIVRT 556
Query: 933 SAQCQRQLHKXXXXXXXXXXXXXXXXXEMVEFTLNEVLVASISQVMMKSNAKGIRIVNET 992
SA Q+ E + F L +L + K+N KG+
Sbjct: 557 SAASLLQV--IDDILDFSKIEAGRLEMETIGFDLRTLLDDLAESLAFKANEKGLTFTCLL 614
Query: 993 AEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAY 1048
++ L GD +RL+QVL + ++ F G + SLTK G SV L +
Sbjct: 615 RPEV-PRFLMGDPVRLKQVLVNLAGNALKFTHQGEISVEVGSLTKT--GDSVKLRF 667
Score = 61 (26.5 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 232 ELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPY 264
EL G + V++ FH DD G ++ +++++ EPY
Sbjct: 299 ELEGIN-VISLLFHPDDIGSMIDKMSRAHSEPY 330
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1052 1017 0.00080 123 3 11 22 0.37 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 626 (67 KB)
Total size of DFA: 457 KB (2218 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 80.32u 0.09s 80.41t Elapsed: 00:00:06
Total cpu time: 80.33u 0.09s 80.42t Elapsed: 00:00:06
Start: Tue May 21 03:42:52 2013 End: Tue May 21 03:42:58 2013