BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001564
(1052 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224122788|ref|XP_002318913.1| phytochrome [Populus trichocarpa]
gi|222857289|gb|EEE94836.1| phytochrome [Populus trichocarpa]
Length = 1126
Score = 1891 bits (4899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 905/1036 (87%), Positives = 970/1036 (93%), Gaps = 3/1036 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
AR+IAQTT+DAKLHADFE SG+SFDYS+SVRV+ + GGDQ PRSD+VTT YLHHIQKGKL
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTTYLHHIQKGKL 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQPFGCLLALDEKTFKV+AYSENAPELLTMV+HAVPSVG+HPVLGIG+DI+TIFTAPSAS
Sbjct: 80 IQPFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
ALQKA+GFG+VSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDR MAYKFH+DDHGEVVSE+TK
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
G+EPYLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HVKVLQDEKLPFDLTLCGSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQKRKRLWGLVVCHNTTPRFVP 376
PHSCHLQYMENMNSIASLVMAVVVND +E+GD + PQKRKRLWGLVVCHNT+PRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSVNPQKRKRLWGLVVCHNTSPRFVP 379
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 436
FPLRYACEFLAQVFAIHVNKELELE QI+EKNILRTQTLLCDMLMRDAPLGIVTQSPNIM
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 437 DLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALA 496
DLVKCDGA L Y+NKIWRLG+TP+D QL DI WLSEYHMDSTGLS DSLYDAGY GALA
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 497 LGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEV 556
LGDVVCGMAAVRI+ KDM+FWFRSQTA+E+RWGGAKHEP EKDDGR+MHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTS 616
VKTRSLPWKDYEMDAIHSLQLILRNAFKD+ T+D+DTK+IH++L DLKIEGM+ELEAVTS
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNAFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 617 EMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRM 676
EMVRLIETATVPILAVDVDGLVNGWNTKI+ELTGL VDKAIGKH LTLVEDSS+D VKRM
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRM 679
Query: 677 LYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKT 736
L+LALQG+EEQNIQFEIKTHGSK PI L+VNACASRDLH+NVVGVCFV QDIT QK
Sbjct: 680 LFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQKM 739
Query: 737 VMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLA 796
VMDKFTRIEGDYKAIVQN NPLIPPIFG+DEFGWC EWNPAM LTGWKREEV+DK+LL
Sbjct: 740 VMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLG 799
Query: 797 EVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLD 856
EVFG NMACCRLKNQEAFVNLG+VLN AM+GQ+ EKV FGFFAR GKY ECLLCV+KKLD
Sbjct: 800 EVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLD 859
Query: 857 REGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKM 916
REGAVTGVFCFLQLAS ELQQALHVQRLSEQTALKRLKALAY KRQI NPLSGIIFS KM
Sbjct: 860 REGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKRQIWNPLSGIIFSGKM 919
Query: 917 MEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQ 976
MEGTELGAEQK LLHTSAQCQ QL KILDDSDLDSII+GYLDLEMVEFTL EVLVA+ SQ
Sbjct: 920 MEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREVLVAATSQ 979
Query: 977 VMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLT 1036
VMMKSN KGIRI+N+ AE+ M+ETLYGDSIRLQQVLADFL +S+NF P+GG L VS+SLT
Sbjct: 980 VMMKSNEKGIRIINDAAEETMAETLYGDSIRLQQVLADFLQMSVNFTPSGGLLSVSASLT 1039
Query: 1037 KDQLGQSVHLAYLELR 1052
KDQLGQSV+L +LELR
Sbjct: 1040 KDQLGQSVYLVHLELR 1055
>gi|340007753|gb|AEK26583.1| phytochrome A [Populus tremula]
Length = 1109
Score = 1886 bits (4885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 901/1036 (86%), Positives = 970/1036 (93%), Gaps = 3/1036 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
AR+IAQTT+DAKLHADFE SG+SFDYS+SVRV+ + GGDQ PRSD+VTTAYLHHIQKGKL
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKL 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQPFGCLLALDEKTF+V+AYSENAPELLTMV+HAVPSVG+HPVLGIG+DI+TIFTAPSAS
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
ALQKA+GFG+VSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDR MAYKFH+DDHGEVVSE+TK
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
G+EPYLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HVKVLQDEKLPFDLTLCGSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQKRKRLWGLVVCHNTTPRFVP 376
PHSCHLQYMENMNSIASLVMAVVVND +E+GD + PQKRKRLWGLVVCHNT+PRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVP 379
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 436
FPLRYACEFLAQVFAIHVNKELELE QI+EKNILRTQTLLCDMLMRDAPLGIVTQSPNIM
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 437 DLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALA 496
DLVKCDGA L Y+NKIWRLG+TP+D QL DI WLSEYHMDSTGLS DSLYDAGY GALA
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 497 LGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEV 556
LGDVVCGMAAVRI+ KDM+FWFRSQTA+E+RWGGAKHEP EKDDGR+MHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTS 616
VKTRSLPWKDYEMDAIHSLQLILRN FKD+ T+D+DTK+IH++L DLKIEGM+ELEAVTS
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 617 EMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRM 676
EMVRLIETATVPILAVDVDGLVNGWNTKI+ELTGL VDKAIGKH LTLVEDSS+D VKRM
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRM 679
Query: 677 LYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKT 736
L+LALQG+EEQNIQFEIKTHGSK PI L+VNACASRDLH+NVVGVCFV QDIT QK
Sbjct: 680 LFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQKM 739
Query: 737 VMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLA 796
VMDKFTRIEGDYKAIVQN NPLIPPIFG+DEFGWC EWNPAM LTGWKREEV+DK+LL
Sbjct: 740 VMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLG 799
Query: 797 EVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLD 856
EVFG NMACCRLKNQEAFVNLG+VLN AM+GQ+ EKV FGFFAR GKY ECLLCV+KKLD
Sbjct: 800 EVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLD 859
Query: 857 REGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKM 916
REGAVTGVFCFLQLAS ELQQALHVQRLSEQTALKRLKALAY K+QI NPLSGIIFS KM
Sbjct: 860 REGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIFSGKM 919
Query: 917 MEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQ 976
MEGTELGAEQK LLHTSAQCQ QL KILDDSDLDSII+GYLDLEMVEFTL EVLVA+ SQ
Sbjct: 920 MEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREVLVAATSQ 979
Query: 977 VMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLT 1036
VMMKSN KGIRI+N+ AE++M+ETLYGDSIRLQQVLADFL +S+NF P+GG L VS+S +
Sbjct: 980 VMMKSNEKGIRIINDAAEEMMAETLYGDSIRLQQVLADFLLMSVNFTPSGGLLTVSASFS 1039
Query: 1037 KDQLGQSVHLAYLELR 1052
KDQLGQSV+L +LELR
Sbjct: 1040 KDQLGQSVYLVHLELR 1055
>gi|225450405|ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
gi|147838424|emb|CAN76586.1| hypothetical protein VITISV_020287 [Vitis vinifera]
gi|183239014|gb|ACC60965.1| phytochrome A [Vitis vinifera]
gi|296089871|emb|CBI39690.3| unnamed protein product [Vitis vinifera]
Length = 1124
Score = 1877 bits (4862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 894/1042 (85%), Positives = 977/1042 (93%), Gaps = 4/1042 (0%)
Query: 14 GKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHH 73
G+S+HSAR+IAQTT+DAKLHADFE SG+SFDYS+SVR + AGGDQQPRSD+VTTAYLHH
Sbjct: 14 GRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTP-AGGDQQPRSDKVTTAYLHH 72
Query: 74 IQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIF 133
IQKGKLIQPFG LLALDEKTFKVIAYSENAPE+LTMV+HAVPSVG+HPVLGIG+D++TIF
Sbjct: 73 IQKGKLIQPFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIF 132
Query: 134 TAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMT 193
+ PSASAL KALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLIIDFEPVKPYEVPMT
Sbjct: 133 SGPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMT 192
Query: 194 AAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVV 253
AAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM+QEVFELTGYDRVMAYKFH+DDHGEVV
Sbjct: 193 AAGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVV 252
Query: 254 SEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLC 313
SEITK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+H++VLQDEKLPFDLTLC
Sbjct: 253 SEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLC 312
Query: 314 GSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNT 370
GSTLRAPHSCH+QYMENMNSIASLVMAVVVND +EEG+++ PQKRKRLWGLVVCH+T
Sbjct: 313 GSTLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHT 372
Query: 371 TPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVT 430
TPRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKNILRTQTLLCDMLMRDAPLGIV+
Sbjct: 373 TPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVS 432
Query: 431 QSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAG 490
QSPN+MDLVKCDGAALLYKNK+WRLG+TP+DFQLHDI SWLSEYHMDSTGLS DSLYDAG
Sbjct: 433 QSPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAG 492
Query: 491 YLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSF 550
Y GALALGD VCGMAAV+I+ KD +FWFRS TA+EVRWGGAKHEP EKDDGRKMHPRSSF
Sbjct: 493 YPGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSF 552
Query: 551 KAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKE 610
KAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD +D++T +IH+KL DLKIEGM+E
Sbjct: 553 KAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQE 612
Query: 611 LEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSI 670
LEAVTSEMVRLIETA+VPILAVDVDGLVNGWNTKI+ELT L VDKAIG H LTLVEDSS
Sbjct: 613 LEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSA 672
Query: 671 DTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQD 730
DTVK+ML+LALQGQEEQN+QFEIKTHGSK + PI+L+VNACASRDLH+NVVGVCFVAQD
Sbjct: 673 DTVKKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLHENVVGVCFVAQD 732
Query: 731 ITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVI 790
IT QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWNPAMVKL+GW REEV+
Sbjct: 733 ITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVM 792
Query: 791 DKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLC 850
DK+LL EVFGT+MACCRLKN+EAFV LGIVLN M+G++ EKV FGFF+++GKY ECLL
Sbjct: 793 DKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVECLLS 852
Query: 851 VNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGI 910
V+KKLDREGAVTGVFCFLQLAS ELQQALH+QRLSEQTALKRLKALAY KRQI+NPLSGI
Sbjct: 853 VSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGI 912
Query: 911 IFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVL 970
IFSRKMME T+LG EQ+++LHTSAQCQRQL KILDD DLDSII+GYLDLEMVEFTL EVL
Sbjct: 913 IFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLREVL 972
Query: 971 VASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLM 1030
VASISQVM+KSN KGI+IVN+ E IM+ETLYGD +RLQQVLADFL IS+NF P GGQL
Sbjct: 973 VASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTPGGGQLS 1032
Query: 1031 VSSSLTKDQLGQSVHLAYLELR 1052
V++SL KD+LG+SVHL +LELR
Sbjct: 1033 VAASLIKDRLGESVHLVHLELR 1054
>gi|183239022|gb|ACC60969.1| phytochrome A [Vitis riparia]
Length = 1124
Score = 1871 bits (4847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 892/1042 (85%), Positives = 976/1042 (93%), Gaps = 4/1042 (0%)
Query: 14 GKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHH 73
G+S+HSAR+IAQTT+DAKLHADFE SG+SFDYS+SVR + AGGDQQPRSD+VTTAYLHH
Sbjct: 14 GRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTP-AGGDQQPRSDKVTTAYLHH 72
Query: 74 IQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIF 133
IQKGKLIQPFG LLALD+KTFKVIAYSENAPE+LTMV+HAVPSVG+HPVLGIG+D++TIF
Sbjct: 73 IQKGKLIQPFGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIF 132
Query: 134 TAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMT 193
+ PSASAL KALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLIIDFEPVKPYEVPMT
Sbjct: 133 SGPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMT 192
Query: 194 AAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVV 253
AAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM+QEVFELTGYDRVMAYKFH+DDHGEVV
Sbjct: 193 AAGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVV 252
Query: 254 SEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLC 313
SEITK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+H++VLQDEKLPFDLTLC
Sbjct: 253 SEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLC 312
Query: 314 GSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNT 370
GSTLRAPHSCH+QYMENMNSIASLVMAVVVND +EEG+++ PQKRKRLWGLVVCH+T
Sbjct: 313 GSTLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHT 372
Query: 371 TPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVT 430
TPRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKNILRTQTLLCDMLMRDAPLGIV+
Sbjct: 373 TPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVS 432
Query: 431 QSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAG 490
QSPN+MDLVKCDGAALLYKNK+WRLG+TP+DFQLHDI SWLSEYHMDSTGLS DSLYDAG
Sbjct: 433 QSPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAG 492
Query: 491 YLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSF 550
Y GALALGD VCGMAAV+I+ KD +FWFRS TA+EVRWGGAKHEP EKDDGRKMHPRSSF
Sbjct: 493 YPGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSF 552
Query: 551 KAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKE 610
KAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD +D++T +IH+KL DLKIEGM+E
Sbjct: 553 KAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQE 612
Query: 611 LEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSI 670
LEAVTSEMVRLIETA+VPILAVDVDGLVNGWNTKI+ELT L VDKAIG H LTLVEDSS
Sbjct: 613 LEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSA 672
Query: 671 DTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQD 730
DTVK+ML+LALQGQEEQN+QFEIKTHGSK + PI+L+VNACASRDL +NVVGVCFVAQD
Sbjct: 673 DTVKKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLDENVVGVCFVAQD 732
Query: 731 ITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVI 790
IT QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWNPAMVKL+GW REEV+
Sbjct: 733 ITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVM 792
Query: 791 DKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLC 850
DK+LL EVFGT+MACCRLKN+EAFV LGIVLN M+G++ EKV FGFF+++GKY ECLL
Sbjct: 793 DKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVECLLS 852
Query: 851 VNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGI 910
V+KKLDREGAVTGVFCFLQLAS ELQQALH+QRLSEQTALKRLKALAY KRQI+NPLSGI
Sbjct: 853 VSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGI 912
Query: 911 IFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVL 970
IFSRKMME T+LG EQ+++LHTSAQCQRQL KILDD DLDSII+GYLDLEMVEFTL EVL
Sbjct: 913 IFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLREVL 972
Query: 971 VASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLM 1030
VASISQVM+KSN KGI+IVN+ E IM+ETLYGD +RLQQVLADFL IS+NF P GGQL
Sbjct: 973 VASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTPGGGQLS 1032
Query: 1031 VSSSLTKDQLGQSVHLAYLELR 1052
V++SL KD+LG+SVHL +LELR
Sbjct: 1033 VAASLIKDRLGESVHLVHLELR 1054
>gi|255543066|ref|XP_002512596.1| phytochrome A, putative [Ricinus communis]
gi|223548557|gb|EEF50048.1| phytochrome A, putative [Ricinus communis]
Length = 1124
Score = 1871 bits (4847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 881/1036 (85%), Positives = 958/1036 (92%), Gaps = 3/1036 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
AR+I+QT +DAKLHADFE SG+SFDYSNSV V+S+ G D PRSD+VTTAYLHHIQKGKL
Sbjct: 20 ARIISQTAVDAKLHADFEESGSSFDYSNSVHVTSSTGLDHAPRSDKVTTAYLHHIQKGKL 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQPFGCLLALDEKT+KVIAYSENAPE+LTMV+HAVPSVGDHPVLGIG+DI+TIFTAPSAS
Sbjct: 80 IQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTAPSAS 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
ALQKALGFG+VSLLNPILVHCKTSGKPFYAIVHRVTGS IIDFEPVKPYEVPMTAAGALQ
Sbjct: 140 ALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFIIDFEPVKPYEVPMTAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+RLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFH+DDHGEV+SE+TK
Sbjct: 200 SYKLAAKAISRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEVTKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA+HVKVLQDEKLP +LTLCGSTLRA
Sbjct: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDEKLPLELTLCGSTLRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL---PQKRKRLWGLVVCHNTTPRFVP 376
PHSCHLQYMENM+S+ASLVMAVVVN+ +E+ D+ PQKRKRLWGLVVCHNTTPRFVP
Sbjct: 320 PHSCHLQYMENMDSVASLVMAVVVNEGDEDDDSPTSVQPQKRKRLWGLVVCHNTTPRFVP 379
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 436
FPLRYACEFLAQVFAIHVNKELELE QI+EKNILRTQTLLCDML+RDAPLGI+TQSPNI
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLLRDAPLGILTQSPNIT 439
Query: 437 DLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALA 496
DLVKCDGAALLYKNKIWRLGVTP+D Q+ DI WLSEYHMDSTGLS DSLYDAGY AL+
Sbjct: 440 DLVKCDGAALLYKNKIWRLGVTPSDLQIRDIAVWLSEYHMDSTGLSTDSLYDAGYSAALS 499
Query: 497 LGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEV 556
L DVVCGMAAVRI+ KDM+FWFR+ TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLEV
Sbjct: 500 LEDVVCGMAAVRITSKDMLFWFRAPTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEV 559
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTS 616
VKTRSLPWKDYEMDAIHSLQLILRNAFKD T+D D K+IHS+L DLKIEGM+ELEAVTS
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNAFKDAETMDADAKAIHSRLSDLKIEGMQELEAVTS 619
Query: 617 EMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRM 676
EMVRLIETATVPILAVDVDGLVNGWNTKIAELTGL VDKAIGKH LTLVED SID VK M
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLPVDKAIGKHLLTLVEDGSIDLVKNM 679
Query: 677 LYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKT 736
L+ ALQG+EEQNIQFEIKTHGSK+ PI+L+VNACASRD+ +NVVGVCFVAQDIT QKT
Sbjct: 680 LFSALQGKEEQNIQFEIKTHGSKVESGPISLVVNACASRDISENVVGVCFVAQDITGQKT 739
Query: 737 VMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLA 796
VMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWNPAM KLTGWKREEV+DK+LL
Sbjct: 740 VMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMAKLTGWKREEVMDKMLLG 799
Query: 797 EVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLD 856
EVFG N ACC LKNQEAFVNLG+++N AM+ Q PEKV F FFARN KY ECLLCV+KKLD
Sbjct: 800 EVFGINRACCCLKNQEAFVNLGVLINNAMTSQVPEKVSFSFFARNKKYVECLLCVSKKLD 859
Query: 857 REGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKM 916
REGAVTGVFCFLQLAS ELQQALH+QRLSEQTALKRLK LAY KRQI+NPLSGI+FSRK+
Sbjct: 860 REGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKTLAYIKRQIQNPLSGIMFSRKL 919
Query: 917 MEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQ 976
ME TEL AEQK+LLHTSAQCQRQL KILDDSD+DSI++GYLDLEMVEFTL+EVL+A+ISQ
Sbjct: 920 MEITELDAEQKQLLHTSAQCQRQLSKILDDSDIDSIVEGYLDLEMVEFTLHEVLIAAISQ 979
Query: 977 VMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLT 1036
V +KS KGIRIVN+ AE IM+ETLYGDSIRLQQVLADFL+ S++F P GGQL +++ T
Sbjct: 980 VTIKSKGKGIRIVNDAAEVIMTETLYGDSIRLQQVLADFLAASVDFTPPGGQLTIAAKFT 1039
Query: 1037 KDQLGQSVHLAYLELR 1052
KDQLGQSVHL +LELR
Sbjct: 1040 KDQLGQSVHLVHLELR 1055
>gi|2499555|sp|P93673.1|PHYA_LATSA RecName: Full=Phytochrome type A
gi|1848273|gb|AAB47994.1| phytochrome type A [Lathyrus sativus]
Length = 1124
Score = 1845 bits (4780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 863/1054 (81%), Positives = 962/1054 (91%), Gaps = 3/1054 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS++RP+QSS+N+G+SR+SAR+IAQTT+DAKLHA FE SG+SFDYS+ VRVS + GDQQ
Sbjct: 1 MSTTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSWVRVSGSVDGDQQ 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRS++VTTAYL+HIQ+GK IQPFGCLLALDEKT KV+AYSENAPE+LTMV+HAVPSVGDH
Sbjct: 61 PRSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
P LGIG+DI+T+FTAPSASALQKALGF EVSLLNPILVHCKTSGKPFYAI+HRVTGSLII
Sbjct: 121 PALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSL SGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEV++EI K GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 241 AYKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQK 357
LQDEKLPFDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVND +E+GD+ LPQK
Sbjct: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQK 360
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
+KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELEYQILEKNILRTQTLLC
Sbjct: 361 KKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLC 420
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAAL Y+NK+W LG TP ++Q+ +I W+SEYH D
Sbjct: 421 DMLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTEYQIREIALWMSEYHTD 480
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAG+ GAL+L D VCGMAAVRI+ KD++FWFRS TA+E+RWGGAKHEP E
Sbjct: 481 STGLSTDSLLDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGE 540
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DDGRKMHPRSSFKAFLEVVK RS+PWKD+EMDAIHSLQLILRNA KD +DL+TK+I+
Sbjct: 541 QDDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKAIN 600
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
++L DLKIEGM+ELEAVTSEMVRLIETATVPILAVDVDG VNGWN KIAELTGL V +AI
Sbjct: 601 TRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGEAI 660
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS D VK+ML LALQG+EE+N+QFEIKTHG ++ PI+LIVNACASRDL
Sbjct: 661 GKHLLTLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVEFGPISLIVNACASRDL 720
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPA 777
+NVVGVCFVAQDIT QKTVMDKFTRIEGDYKAIVQNPN LIPPIFG+DEFGWCCEWN A
Sbjct: 721 RENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAA 780
Query: 778 MVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGF 837
M+KLTGWKREEV+DK+LL EVFGT M+CCRLKNQEAFVN GIVLNKAM+G + EKV FGF
Sbjct: 781 MIKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVAFGF 840
Query: 838 FARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALA 897
F+R GKY ECLL V+KK+D EG VTGVFCFLQLAS ELQQALH+QRLSEQTALKRLK L
Sbjct: 841 FSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLT 900
Query: 898 YTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYL 957
Y KRQIRNPL+GI+FS KM+EGT+L EQK++++TS+QCQRQL KILDDSDLD IIDGYL
Sbjct: 901 YMKRQIRNPLAGIVFSSKMLEGTDLETEQKQIVNTSSQCQRQLSKILDDSDLDGIIDGYL 960
Query: 958 DLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLS 1017
DLEM EFTL+EVLV S+SQVM +SN KGIRI N+ AE I E+LYGDS+RLQQVLADFL
Sbjct: 961 DLEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIAKESLYGDSLRLQQVLADFLL 1020
Query: 1018 ISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLEL 1051
ISIN PNGGQ++++SSLTK+QLG+SVHL LEL
Sbjct: 1021 ISINSTPNGGQVVIASSLTKEQLGKSVHLVNLEL 1054
>gi|9049366|dbj|BAA99409.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 1845 bits (4779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 869/1056 (82%), Positives = 958/1056 (90%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP+QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSEN+PELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENSPELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHCKTS KPFYAIVHRVTGS+I+
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIV 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIAS VMAVVVN+E+ EGD T PQ
Sbjct: 301 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASHVMAVVVNEEDGEGDATDSTTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++ L +I SWL EYH
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSELHLQEIASWLYEYHT 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH PD
Sbjct: 481 DSTGLSTDSLHDAGFPKALSLGDAVCGMAAVRISLKDMIFWFRSHTAGEVRWGGAKHNPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++T I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTNII 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 601 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + I+L VNACASRD
Sbjct: 661 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHQSRADAGTISLAVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAFVNLGIVLN A++ Q+ EKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNGAVTSQESEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TALKRLKA+
Sbjct: 841 FFTRGGKYIECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKAI 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPLSG++F+RKMMEGTELG EQ+++LHTSA CQ QL K+LDDSDL+SII+G
Sbjct: 901 AYIKRQIRNPLSGVMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGC 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
LDLEM EF+LNEVL AS SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+S+NF P+GGQL V++SL KDQLG+SVHLAYLE+R
Sbjct: 1021 LMSVNFTPSGGQLTVTASLRKDQLGRSVHLAYLEIR 1056
>gi|9049368|dbj|BAA99410.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 1842 bits (4772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 868/1056 (82%), Positives = 958/1056 (90%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP+QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHCKTS KPFYAIVHRVTGS+I+
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIV 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 301 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++ L +I SWL EYH
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSELHLQEIASWLYEYHT 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH PD
Sbjct: 481 DSTGLSTDSLHDAGFPKALSLGDAVCGMAAVRISLKDMIFWFRSHTAGEVRWGGAKHNPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++T I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTNII 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 601 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + I+L VNACASRD
Sbjct: 661 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHQSRADAGTISLAVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAFVNLGIVLN A++ Q+ EKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNGAVTSQESEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TALKRLKA+
Sbjct: 841 FFTRGGKYIECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKAI 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPLSG++F+R+M+EGTELG EQ+++LHTSA CQ QL K+LDDSDL+SII+G
Sbjct: 901 AYIKRQIRNPLSGVMFTREMIEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGC 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
LDLEM EF+LNEVL AS SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+S+NF P+GGQL V++SL KDQ G+SVHLAYLE+R
Sbjct: 1021 LMSVNFTPSGGQLTVTASLRKDQPGRSVHLAYLEIR 1056
>gi|15217562|ref|NP_172428.1| phytochrome A [Arabidopsis thaliana]
gi|6093714|sp|P14712.2|PHYA_ARATH RecName: Full=Phytochrome A; AltName: Full=Protein ELONGATED
HYPOCOTYL 8; AltName: Full=Protein FAR RED ELONGATED 1;
AltName: Full=Protein FAR RED ELONGATED HYPOCOTYL 2
gi|404670|gb|AAA21351.1| phytochrome A [Arabidopsis thaliana]
gi|3482934|gb|AAC33219.1| phytochrome A [Arabidopsis thaliana]
gi|14517372|gb|AAK62577.1| At1g09570/F14J9_27 [Arabidopsis thaliana]
gi|332190341|gb|AEE28462.1| phytochrome A [Arabidopsis thaliana]
Length = 1122
Score = 1840 bits (4767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 876/1056 (82%), Positives = 965/1056 (91%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENA ELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHC+TS KPFYAI+HRVTGS+II
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIII 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 301 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+EL+ Q++EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYHM
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHM 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 481 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 601 YSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 661 IGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAFVNLGIVLN A++ QDPEKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TA+KRLKAL
Sbjct: 841 FFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKAL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPLSGI+F+RKM+EGTELG EQ+R+L TSA CQ+QL KILDDSDL+SII+G
Sbjct: 901 AYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGC 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
LDLEM EFTLNEVL AS SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+++NF P+GGQL VS+SL KDQLG+SVHLA LE+R
Sbjct: 1021 LMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIR 1056
>gi|16421|emb|CAA35221.1| unnamed protein product [Arabidopsis thaliana]
Length = 1122
Score = 1838 bits (4761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 874/1056 (82%), Positives = 965/1056 (91%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENA ELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHC+TS KPFYAI+HRVTGS+II
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIII 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 301 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+EL+ Q++EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYHM
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHM 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 481 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 601 YSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 661 IGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAFVNLGIVLN A++ QDP+KV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPDKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDR+G VTGVFCFLQLASHELQQALHVQRL+E+TA+KRLKAL
Sbjct: 841 FFTRGGKYVECLLCVSKKLDRKGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKAL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPLSGI+F+RKM+EGTELG EQ+R+L TSA CQ+QL KILDDSDL+SII+G
Sbjct: 901 AYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGC 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
LDLEM EFTLNEVL AS SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+++NF P+GGQL VS+SL KDQLG+SVHLA LE+R
Sbjct: 1021 LMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIR 1056
>gi|297849258|ref|XP_002892510.1| hypothetical protein ARALYDRAFT_471053 [Arabidopsis lyrata subsp.
lyrata]
gi|297338352|gb|EFH68769.1| hypothetical protein ARALYDRAFT_471053 [Arabidopsis lyrata subsp.
lyrata]
Length = 1122
Score = 1838 bits (4760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 874/1056 (82%), Positives = 963/1056 (91%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENA ELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHCKTS KPFYAI+HRVTGS+I+
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIIHRVTGSIIV 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQ
Sbjct: 301 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDASTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q+LEKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMLEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAAL YK+KIW+LG TP++F L +I SWL EYHM
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKDKIWKLGTTPSEFHLQEIASWLCEYHM 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 481 DSTGLSTDSLHDAGFPKALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++T I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTNVI 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 601 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 661 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAFVNLGIVLN A++ QDPEKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TA+KRLKAL
Sbjct: 841 FFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKAL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPLSGI+F+RKM+EGTELG EQ+R+L TSA CQ+QL KILDDSDL+SII+G
Sbjct: 901 AYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGC 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
LDLEM EF+LNEVL AS SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+S+NF P+GGQL V++SL K+QLG+SVHLA LE+R
Sbjct: 1021 LMSVNFTPSGGQLTVTASLRKEQLGRSVHLANLEIR 1056
>gi|9049364|dbj|BAA99408.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 1837 bits (4759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 873/1056 (82%), Positives = 962/1056 (91%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP+QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHCKTS KPFYAIVHRVTGS+I+
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIV 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK G+EPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 301 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLYEYHT 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSLYDAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 481 DSTGLSTDSLYDAGFPKALSLGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKFI 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 601 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 661 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT ACCRLKNQEAFVNLGIVLN A++ Q+ EKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQTACCRLKNQEAFVNLGIVLNSAVTSQESEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TALKRLK L
Sbjct: 841 FFTRGGKYIECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKTL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPLSGI+F+RKMMEGTELG EQ+++L TS+ CQ+QL K+LDDSDL+ II+G
Sbjct: 901 AYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILQTSSLCQKQLSKVLDDSDLERIIEGC 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
LDLEM EF+LNEVL AS SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+S+NF P+GGQL V++SL KDQLG+SVHLAYLE+R
Sbjct: 1021 LMSVNFTPSGGQLTVTASLRKDQLGRSVHLAYLEIR 1056
>gi|240119381|dbj|BAH79239.1| phytochrome A [Cardamine nipponica]
gi|240119383|dbj|BAH79240.1| phytochrome A [Cardamine nipponica]
gi|240119387|dbj|BAH79242.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1834 bits (4750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 872/1056 (82%), Positives = 963/1056 (91%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP+QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEDSGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHCKTS KPFYAIVHRVTGS+I+
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIV 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK G+EPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQD+KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 301 LQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KD+IFWFRS TA EVRWGGAKH+PD
Sbjct: 481 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKII 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 601 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRD
Sbjct: 661 IGKHLLTLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+N+VGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAF+NLGIVLN A++ Q+ EKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TALKRLKAL
Sbjct: 841 FFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKAL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPLSGI+F+RKMMEGTELG EQ+++LHTSA CQ QL K+LDDSDL+SII+G
Sbjct: 901 AYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGC 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
LDLEM EF+LNEVL AS SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+S+NF P+GGQL V++SL KDQLG+SVHLAYLE+R
Sbjct: 1021 LMSVNFTPSGGQLTVTASLRKDQLGRSVHLAYLEIR 1056
>gi|240119385|dbj|BAH79241.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1833 bits (4747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 871/1056 (82%), Positives = 963/1056 (91%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP+QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEDSGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHCKTS KPFYAIVHRVTGS+I+
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIV 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK G+EPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQD+KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 301 LQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I +WL EYH
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIATWLCEYHT 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KD+IFWFRS TA EVRWGGAKH+PD
Sbjct: 481 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKII 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 601 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRD
Sbjct: 661 IGKHLLTLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+N+VGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAF+NLGIVLN A++ Q+ EKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TALKRLKAL
Sbjct: 841 FFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKAL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPLSGI+F+RKMMEGTELG EQ+++LHTSA CQ QL K+LDDSDL+SII+G
Sbjct: 901 AYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGC 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
LDLEM EF+LNEVL AS SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+S+NF P+GGQL V++SL KDQLG+SVHLAYLE+R
Sbjct: 1021 LMSVNFTPSGGQLTVTASLRKDQLGRSVHLAYLEIR 1056
>gi|240119379|dbj|BAH79238.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1832 bits (4745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 871/1056 (82%), Positives = 962/1056 (91%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP+QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHCKTS KPFYAIVHRVTGS+I+
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIV 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK G+EPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQD+KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 301 LQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KD+IFWFRS TA EVRWGGAKH+PD
Sbjct: 481 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKII 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 601 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRD
Sbjct: 661 IGKHLLTLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+N+VGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAF+NLGIVLN A++ Q+ EKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TALKRLKAL
Sbjct: 841 FFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKAL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPLSGI+F+RKMMEGTELG EQ+++LHTSA CQ QL K+LDDSDL+SII+G
Sbjct: 901 AYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGC 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
LDLEM EF+LNEVL S SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFSLNEVLTTSTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+S+NF P+GGQL V++SL KDQLG+SVHLAYLE+R
Sbjct: 1021 LMSVNFTPSGGQLTVTASLRKDQLGRSVHLAYLEIR 1056
>gi|240119375|dbj|BAH79236.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1831 bits (4743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 871/1056 (82%), Positives = 962/1056 (91%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP+QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHCKTS KPFYAIVHRVTGS+I+
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIV 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK G+EPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQD+KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 301 LQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KD+IFWFRS TA EVRWGGAKH+PD
Sbjct: 481 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKII 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 601 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRD
Sbjct: 661 IGKHLLTLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+N+VGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAF+NLGIVLN A++ Q+ EKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TALKRLKAL
Sbjct: 841 FFTRGGKYVECLLCVSKKLDREGEVTGVFCFLQLASHELQQALHVQRLAERTALKRLKAL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPLSGI+F+RKMMEGTELG EQ+++LHTSA CQ QL K+LDDSDL+SII+G
Sbjct: 901 AYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGC 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
LDLEM EF+LNEVL S SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFSLNEVLTTSTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+S+NF P+GGQL V++SL KDQLG+SVHLAYLE+R
Sbjct: 1021 LMSVNFTPSGGQLTVTASLRKDQLGRSVHLAYLEIR 1056
>gi|240119389|dbj|BAH79243.1| phytochrome A [Cardamine resedifolia]
Length = 1122
Score = 1831 bits (4743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 870/1056 (82%), Positives = 963/1056 (91%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP+QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHCKTS KPFYAIVHRVTGS+I+
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIV 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGY+RVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYERVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK G+EPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 301 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KD+IFWFRS TA EVRWGGAKH+PD
Sbjct: 481 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISSKDVIFWFRSHTAGEVRWGGAKHDPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKII 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 601 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ V+RML AL+G EEQN+QFEIKTH S + PI+L+VNACASRD
Sbjct: 661 IGKHLLTLVEDSSVEIVRRMLENALEGNEEQNVQFEIKTHLSMADTGPISLVVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+N+VGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAF+NLGIVLN A++ Q+ EKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TALKRLKAL
Sbjct: 841 FFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKAL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPLSGI+F+RKMMEGTELG EQ+++LHTSA CQ+QL K+LDDSDL+SII+G
Sbjct: 901 AYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQKQLSKVLDDSDLESIIEGC 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
LDLEM EF+LNEVL AS SQVMMKSN K +RI NET E++MS+TLYGDSI LQQVLADF+
Sbjct: 961 LDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSITLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+S+NF P+GGQL V++SL KDQLG+SVHLAYLE+R
Sbjct: 1021 LMSVNFTPSGGQLTVTASLRKDQLGRSVHLAYLEIR 1056
>gi|240119373|dbj|BAH79235.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1830 bits (4741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 870/1056 (82%), Positives = 962/1056 (91%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP+QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHCKTS KPFYAIVHRVTGS+I+
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIV 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK G+EPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQD+KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 301 LQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDM+MRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 421 CDMMMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KD+IFWFRS TA EVRWGGAKH+PD
Sbjct: 481 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKII 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 601 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRD
Sbjct: 661 IGKHLLTLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+N+VGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAF+NLGIVLN A++ Q+ EKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TALKRLKAL
Sbjct: 841 FFTRGGKYVECLLCVSKKLDREGEVTGVFCFLQLASHELQQALHVQRLAERTALKRLKAL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPLSGI+F+RKMMEGTELG EQ+++LHTSA CQ QL K+LDDSDL+SII+G
Sbjct: 901 AYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGC 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
LDLEM EF+LNEVL S SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFSLNEVLTTSTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+S+NF P+GGQL V++SL KDQLG+SVHLAYLE+R
Sbjct: 1021 LMSVNFTPSGGQLTVTASLRKDQLGRSVHLAYLEIR 1056
>gi|240119377|dbj|BAH79237.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 1829 bits (4737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 870/1056 (82%), Positives = 961/1056 (91%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP+QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHCKTS KPFYAIVHRVTGS+I+
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIV 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEV MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVSMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK G+EPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQD+KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 301 LQDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KD+IFWFRS TA EVRWGGAKH+PD
Sbjct: 481 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKII 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 601 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRD
Sbjct: 661 IGKHLLTLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSMADAGPISLVVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+N+VGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAF+NLGIVLN A++ Q+ EKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFLNLGIVLNSAVTSQESEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TALKRLKAL
Sbjct: 841 FFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKAL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPLSGI+F+RKMMEGTELG EQ+++LHTSA CQ QL K+LDDSDL+SII+G
Sbjct: 901 AYIKRQIRNPLSGIMFTRKMMEGTELGPEQRQILHTSALCQEQLSKVLDDSDLESIIEGC 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
LDLEM EF+LNEVL S SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFSLNEVLTTSTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+S+NF P+GGQL V++SL KDQLG+SVHLAYLE+R
Sbjct: 1021 LMSVNFTPSGGQLTVTASLRKDQLGRSVHLAYLEIR 1056
>gi|350536201|ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
Length = 1123
Score = 1825 bits (4728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 856/1039 (82%), Positives = 950/1039 (91%), Gaps = 3/1039 (0%)
Query: 17 RHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
+HSAR++AQT+IDAKLHADFE SG SFDYS+SVRV+S AG +++P+SD+VTTAYLH IQK
Sbjct: 17 KHSARIVAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEEKPKSDKVTTAYLHQIQK 76
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAP 136
GK IQPFGCLLALDEKT KVIA+SENAPE+LTMV+HAVPSVG+HPVLGIG+DI+TIFT P
Sbjct: 77 GKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGTDIRTIFTGP 136
Query: 137 SASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
S +ALQKALGFGEVSLLNP+LVHCK SGKPFYAIVHRVTGSLI+DFEPVKPYEVPMTAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLILDFEPVKPYEVPMTAAG 196
Query: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEI 256
ALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEVVSEI
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHEDDHGEVVSEI 256
Query: 257 TKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGST 316
TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKV+QDEKLPFDLTLCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPR 373
LRAPH CHLQYMENMNSIASLVMAVVVND +EEG D++ QKRKRLWGLVVCHNTTPR
Sbjct: 317 LRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPR 376
Query: 374 FVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSP 433
FVPFPLRYACEFLAQVFAIHVNKELELE Q LEKNILRTQTLLCDMLMRDAPLGIV+QSP
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDLVKCDGAALLYKNKI RLG+ P+DFQL DIVSWL EYH DSTGLS DSLYDAG+ G
Sbjct: 437 NIMDLVKCDGAALLYKNKIHRLGMNPSDFQLQDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
ALALGD VCGMAAVRIS KD +FWFRS TA+EVRWGGAKHEP EKDDGRKMHPRSSFKAF
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAF 556
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVKTRS+PWKDYEMDAIHSLQLILRNAFKD ++ +T SI+ KL DLKI+GM+ELE+
Sbjct: 557 LEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDAEVVNSNTNSIYKKLNDLKIDGMQELES 616
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VT+EMVRLIETA VPILAVDVDG VNGWNTKIAELTGL VD+AIGKH LTLVEDSS+DTV
Sbjct: 617 VTAEMVRLIETALVPILAVDVDGQVNGWNTKIAELTGLPVDEAIGKHLLTLVEDSSVDTV 676
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+ML LALQG+EE+N++FEIKTHG + PI+LIVNACAS+D+ DNVVGVCF+A DIT
Sbjct: 677 NKMLELALQGKEEKNVEFEIKTHGPSRDSSPISLIVNACASKDVRDNVVGVCFMAHDITG 736
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
QK++MDKFTRIEGDY+AI+QNP+PLIPPIFG+D+FGWC EWN AM KLTGW+R++V+DK+
Sbjct: 737 QKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNTAMTKLTGWRRDDVMDKM 796
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVFGT ACCRLKNQEAFVN G+VLN A++GQ+ EK+PFGFFAR GKY ECLLCV+K
Sbjct: 797 LLGEVFGTQAACCRLKNQEAFVNFGVVLNNAITGQESEKIPFGFFARYGKYVECLLCVSK 856
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
+LD+EGAVTG+FCFLQLASHELQQAL+VQRLSEQTALKRLK LAY +RQIRNPLSGIIFS
Sbjct: 857 RLDKEGAVTGLFCFLQLASHELQQALYVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFS 916
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVAS 973
RKM+EGT LG EQK +LHTSAQCQRQL+KILDD+DLDSIIDGYLDLEM+EF L+EVLVAS
Sbjct: 917 RKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIDGYLDLEMLEFKLHEVLVAS 976
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
ISQVMMKSN K I I N+ E +++ETLYGDS RLQQVLA+FL +S+N P+GGQL +S
Sbjct: 977 ISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNATPSGGQLSISG 1036
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
LTKD++G+SV LA LE R
Sbjct: 1037 RLTKDRIGESVQLALLEFR 1055
>gi|464380|sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1
gi|297478|emb|CAA47284.1| type-A phytochrome [Nicotiana tabacum]
Length = 1124
Score = 1820 bits (4714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 855/1042 (82%), Positives = 954/1042 (91%), Gaps = 3/1042 (0%)
Query: 14 GKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHH 73
+S+HSAR+IAQTTIDAKLHADFE SG SFDYS+SVRV+S AG +++P+SDRVTTAYL+
Sbjct: 14 ARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPKSDRVTTAYLNQ 73
Query: 74 IQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIF 133
IQKGK IQPFGCLLALDEKTFKVIA+SENAPE+LTMV+HAVPSVG+ P LGIG+DI+TIF
Sbjct: 74 IQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPALGIGTDIRTIF 133
Query: 134 TAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMT 193
T PSA+ALQKALGFGEVSLLNP+LVHCKTSGKP+YAIVHRVTGSLIIDFEPVKPYEVPMT
Sbjct: 134 TGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDFEPVKPYEVPMT 193
Query: 194 AAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVV 253
AAGALQSYKLAAKAITRLQ+LPSGSMERLCDTM+QEVFELTGYDRVM YKFH+DDHGEVV
Sbjct: 194 AAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVV 253
Query: 254 SEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLC 313
+EITK GL+PYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKV+QDEKLPFDLTLC
Sbjct: 254 AEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLC 313
Query: 314 GSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNT 370
GSTLRAPH CHLQYMENM+SIASLVMAVVVND +EEG D+T QKRKRLWGLVVCHNT
Sbjct: 314 GSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRKRLWGLVVCHNT 373
Query: 371 TPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVT 430
TPRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKNILRTQTLLCDMLMR APLGIV+
Sbjct: 374 TPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRVAPLGIVS 433
Query: 431 QSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAG 490
QSPNIMDLVKCDGAALLYKNKI RLG+TP+DFQLHDIVSWLSEYH DSTGLS DSLYDAG
Sbjct: 434 QSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDSTGLSTDSLYDAG 493
Query: 491 YLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSF 550
+ GALALGDVVCGMAAVRIS K +FW+RS TA+EVRWGGAKHEP EKDDGRKMHPRSSF
Sbjct: 494 FPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSF 553
Query: 551 KAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKE 610
KAFLEVVKTRS+PWKDYEMDAIHSLQLILRNA KD +D +T IH+KL DLKI+G++E
Sbjct: 554 KAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTKLNDLKIDGLQE 613
Query: 611 LEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSI 670
LEAVT+EMVRLIETA+VPI AVDVDG +NGWNTKIAELTGL VD+AIG H LTLVEDSS+
Sbjct: 614 LEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGNHLLTLVEDSSV 673
Query: 671 DTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQD 730
DTV +ML LALQG+EE+N++FEIKTHG + PI+LIVNACASRD+ D+VVGVCF+AQD
Sbjct: 674 DTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGDSVVGVCFIAQD 733
Query: 731 ITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVI 790
IT QK +MDKFTRIEGDY+AI+QNP+PLIPPIFG+D+FGWC EWN AM KLTGW+R++VI
Sbjct: 734 ITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVI 793
Query: 791 DKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLC 850
DK+LL EVFGT ACCRLKNQEAFVN G+VLN AM+GQ+ K+ FGFFARNGKY ECLLC
Sbjct: 794 DKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFARNGKYVECLLC 853
Query: 851 VNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGI 910
V+K+LDREGAVTG+FCFLQLASHELQQALH+QRLSEQTALKRLK LAY +RQIRNPLSGI
Sbjct: 854 VSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYIRRQIRNPLSGI 913
Query: 911 IFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVL 970
IFSRKM+EGT LG EQK +L TS+QCQRQL+KILDD+DLDSIIDGYLDLEM+EF L+EVL
Sbjct: 914 IFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYLDLEMLEFKLHEVL 973
Query: 971 VASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLM 1030
VASISQ+MMKSN K I IVN+ E +++ETLYGDS RLQQVLA+FL + +N P+GGQL
Sbjct: 974 VASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVLANFLLVCVNSTPSGGQLS 1033
Query: 1031 VSSSLTKDQLGQSVHLAYLELR 1052
+S +LTKD++G+SV LA LE+R
Sbjct: 1034 ISGTLTKDRIGESVQLALLEVR 1055
>gi|130188|sp|P15001.1|PHYA_PEA RecName: Full=Phytochrome A
gi|169132|gb|AAA33682.1| phytochrome [Pisum sativum]
gi|295830|emb|CAA32242.1| phytochrome apoprotein [Pisum sativum]
gi|51173514|gb|AAT97643.1| phytochrome A apoprotein [Pisum sativum]
gi|226757|prf||1604466A phytochrome
Length = 1124
Score = 1820 bits (4713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 865/1054 (82%), Positives = 963/1054 (91%), Gaps = 3/1054 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS++RP+QSS+N+G+SR+SAR+IAQTT+DAKLHA FE SG+SFDYS+SVRVS + GDQQ
Sbjct: 1 MSTTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGDQQ 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRS++VTTAYL+HIQ+GK IQPFGCLLALDEKT KV+AYSENAPE+LTMV+HAVPSVGDH
Sbjct: 61 PRSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
P LGIG+DI+T+FTAPSASALQKALGF EVSLLNPILVHCKTSGKPFYAI+HRVTGSLII
Sbjct: 121 PALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSL SGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEV++EI K GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 241 AYKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQK 357
LQDEKLPFDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVND +E+GD+ LPQK
Sbjct: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQK 360
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
+KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELEYQILEKNILRTQTLLC
Sbjct: 361 KKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLC 420
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAAL Y+NK+W LG TP + QL +I W+SEYH D
Sbjct: 421 DMLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTESQLREIALWMSEYHTD 480
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAG+ GAL+L D VCGMAAVRI+ KD++FWFRS TA+E+RWGGAKHEP +
Sbjct: 481 STGLSTDSLSDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGD 540
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DDGRKMHPRSSFKAFLEVVK RS+PWKD+EMDAIHSLQLILRNA KD +DL+TK+I+
Sbjct: 541 QDDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKAIN 600
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
++L DLKIEGM+ELEAVTSEMVRLIETATVPILAVDVDG VNGWN KIAELTGL V +AI
Sbjct: 601 TRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGEAI 660
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS D VK+ML LALQG+EE+N+QFEIKTHG ++ PI+LIVNACAS+DL
Sbjct: 661 GKHLLTLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVESGPISLIVNACASKDL 720
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPA 777
+NVVGVCFVAQDIT QKTVMDKFTRIEGDYKAIVQNPN LIPPIFG+DEFGWCCEWN A
Sbjct: 721 RENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAA 780
Query: 778 MVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGF 837
M+KLTGWKREEV+DK+LL EVFGT M+CCRLKNQEAFVN GIVLNKAM+G + EKVPFGF
Sbjct: 781 MIKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGF 840
Query: 838 FARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALA 897
F+R GKY ECLL V+KK+D EG VTGVFCFLQLAS ELQQALH+QRLSEQTALKRLK L
Sbjct: 841 FSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLT 900
Query: 898 YTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYL 957
Y KRQIRNPL+GI+FS KM+EGT+L EQKR+++TS+QCQRQL KILDDSDLD IIDGYL
Sbjct: 901 YMKRQIRNPLAGIVFSSKMLEGTDLETEQKRIVNTSSQCQRQLSKILDDSDLDGIIDGYL 960
Query: 958 DLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLS 1017
DLEM EFTL+EVLV S+SQVM +SN KGIRI N+ AE I ETLYGDS+RLQQVLADFL
Sbjct: 961 DLEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIARETLYGDSLRLQQVLADFLL 1020
Query: 1018 ISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLEL 1051
ISIN PNGGQ+++++SLTK+QLG+SVHL LEL
Sbjct: 1021 ISINSTPNGGQVVIAASLTKEQLGKSVHLVNLEL 1054
>gi|76574169|gb|ABA46868.1| phytochrome A [Solanum tuberosum]
Length = 1123
Score = 1816 bits (4703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1039 (81%), Positives = 949/1039 (91%), Gaps = 3/1039 (0%)
Query: 17 RHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
+HSAR+IAQT+IDAKLHADFE SG SFDYS+SVRV+S AG +++P+SD+VTTAYLH IQK
Sbjct: 17 KHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEERPKSDKVTTAYLHQIQK 76
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAP 136
GK IQPFG LLALDEKT KVIA+SENAPE+LTMV+HAVPSVG+HPVLGIG+DI+TIFT P
Sbjct: 77 GKFIQPFGSLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGTDIRTIFTGP 136
Query: 137 SASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
S +ALQKALGFGEVSLLNP+LVHCK SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEI 256
ALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFH+DDHGEVVSEI
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEI 256
Query: 257 TKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGST 316
TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKV+QDEKLPFDLTLCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPR 373
LRAPH CHLQYMENMNS+ASLVMAVVVND +EEG D++ QKRKRLWGLVVCHNTTPR
Sbjct: 317 LRAPHYCHLQYMENMNSVASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPR 376
Query: 374 FVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSP 433
FVPFPLRYACEFLAQVFAIHVNKELELE Q LEKNILRTQTLLCDMLMRDAPLGIV+QSP
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDLVKCDGAALLYKNKI RLG+ P+DFQLHDIVSWL EYH DSTGLS DSLYDAG+ G
Sbjct: 437 NIMDLVKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
ALALGD VCGMAAVRIS KD +FW+RS TA+EVRWGGAKHEP EKDDGRKMHPRSSFKAF
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAF 556
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVKTRS+PWKDYEMDAIHSLQLILRNAFKD ++ +T SIH+KL DL+I+GM+ELEA
Sbjct: 557 LEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTNSIHTKLNDLRIDGMQELEA 616
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VT+EM+RLIETA+VPI AVDVDG VNGWNTK+AELTGL VD+AIGKH LTLVEDSS+DTV
Sbjct: 617 VTAEMIRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTV 676
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+ML LALQG+EE+N++FEIK HG + PI+LIVNACAS+D+ D+VVGVCF+AQDIT
Sbjct: 677 NKMLELALQGKEERNVEFEIKAHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDITG 736
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
QK++MDKFTRIEGDY+AI+QNP+PLIPPIFG+D+FGWC EWN AM KLTGW+R++V+DK+
Sbjct: 737 QKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVMDKM 796
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVFGT ACCRLKNQEAFVN G++LN A++GQ+ EK+PFGFF R GKY ECLLCV+K
Sbjct: 797 LLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFGRYGKYVECLLCVSK 856
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
+LD+EGAVTG+FCFLQLASHELQQALHVQRLSEQTALKRLK LAY +RQI+NPLSGIIFS
Sbjct: 857 RLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIKNPLSGIIFS 916
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVAS 973
KM+EGT LG EQK +LHTSAQCQRQL+KILDD+DLDSII+GYLDLEM+EF L+EVLVAS
Sbjct: 917 WKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIEGYLDLEMLEFKLHEVLVAS 976
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
ISQVMMKSN K I I N+ E +++ETLYGDS RLQQVLA+FL +S+N P+GGQL +S
Sbjct: 977 ISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNSTPSGGQLSISG 1036
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
LTKD++G+SV LA LE R
Sbjct: 1037 RLTKDRIGESVQLALLEFR 1055
>gi|464383|sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A
gi|7550158|gb|AAB21533.2| type A phytochrome [Solanum tuberosum]
Length = 1123
Score = 1812 bits (4693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1039 (81%), Positives = 945/1039 (90%), Gaps = 3/1039 (0%)
Query: 17 RHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
+HSAR+IAQT+IDAKLHADFE SG SFDYS+SVRV++ A G+Q+P+SD+VTTAYLH IQK
Sbjct: 17 KHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPKSDKVTTAYLHQIQK 76
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAP 136
GK IQPFGCLLALDEKT KVIA+SENAPE+LTMV+HAVPSVG+HPVLGIG DI+TIFT P
Sbjct: 77 GKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGIDIRTIFTGP 136
Query: 137 SASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
S +ALQKALGFGEVSLLNP+LVHCK SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEI 256
ALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFH+DDHGEVVSEI
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEI 256
Query: 257 TKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGST 316
TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKV+QDEKLPFDLTLCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPR 373
LRAPH CHLQYMENMNSIASLVMAVVVND +EEG D++ QKRKRLWGLVV HNTTPR
Sbjct: 317 LRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVSHNTTPR 376
Query: 374 FVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSP 433
F PFPLRYACEFLAQVFAI VNKELELE Q LEKNILRTQTLLCDMLMRDAPLGIV+QSP
Sbjct: 377 FAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDL+KCDGAALLYKNKI RLG+ P+DFQLHDIVSWL EYH DSTGLS DSLYDAG+ G
Sbjct: 437 NIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
ALALGD VCGMAAVRIS KD +FW+RS TA+EVRWGGAKHEP EKDDGRKMHPRSSFK F
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKGF 556
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVKTRS+PWKDYEMD IHSLQLILRNAFKD ++ +T SIH+KL DLKI+GM+ELEA
Sbjct: 557 LEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTKLNDLKIDGMQELEA 616
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VT+EMVRLIETA+VPI AVDVDG VNGWNTK+AELTGL VD+AIGKH LTLVEDSS+DTV
Sbjct: 617 VTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTV 676
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+ML LALQGQEE+N++FEIKTHG + PI+LIVNACAS+D+ D+VVGVCF+AQDIT
Sbjct: 677 NKMLELALQGQEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDITG 736
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
QK++MDKFTRIEGDY+AI+QNP+PLIPPIFG+D+FGWC EWN AM LTGW+R++V+DK+
Sbjct: 737 QKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTMLTGWRRDDVMDKM 796
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVFGT ACCRLKNQEAFVN G++LN A++GQ+ EK+PFGFFAR GKY ECLLCV+K
Sbjct: 797 LLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFARYGKYVECLLCVSK 856
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
+LD+EGAVTG+FCFLQLASHELQQALHVQRLSEQTALKRLK LAY +RQIRNPLSGIIFS
Sbjct: 857 RLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFS 916
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVAS 973
RKM+EGT LG EQK +LHTSAQCQRQL KILDD+DLDSII+GYLDLEM+EF L+EVLVAS
Sbjct: 917 RKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYLDLEMLEFKLHEVLVAS 976
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
ISQVMMKSN K I I N+ E +++ETLYGDS RLQQVLA+FL +S+N P+GG+L +S
Sbjct: 977 ISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNSTPSGGKLSISG 1036
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
LTKD++G+SV LA LE R
Sbjct: 1037 KLTKDRIGESVQLALLEFR 1055
>gi|401782502|dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]
Length = 1124
Score = 1810 bits (4687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 864/1036 (83%), Positives = 960/1036 (92%), Gaps = 3/1036 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
ARVIAQTT+DAKLHA+FE SG+SFDYSNSVRVSS GDQQPRSD+VTTAYLHHIQKGKL
Sbjct: 20 ARVIAQTTVDAKLHANFEESGSSFDYSNSVRVSSEVTGDQQPRSDKVTTAYLHHIQKGKL 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQPFGCLLALD+KTF+VIAYSENAPE+LTMV+HAVPSVGDHPVLGIG+D++TIFT PSAS
Sbjct: 80 IQPFGCLLALDDKTFRVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDVRTIFTGPSAS 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGFGEVSLLNPILVHCK+SGKPFYAIVHRVTGSL+IDFEPVKPYEVPMTAAGALQ
Sbjct: 140 ALHKALGFGEVSLLNPILVHCKSSGKPFYAIVHRVTGSLVIDFEPVKPYEVPMTAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI RLQSLPSGS+ERLCDTM+QEVFELTGYDRVMAYKFH+DDHGEVV+E+TK+
Sbjct: 200 SYKLAAKAIARLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVAELTKT 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYP+TDIPQA+RFLFMKNKVRMIVDC A++VKVLQDEKLP DLTLCGSTLRA
Sbjct: 260 GLEPYLGLHYPSTDIPQASRFLFMKNKVRMIVDCCAKNVKVLQDEKLPLDLTLCGSTLRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEE---GDNTLPQKRKRLWGLVVCHNTTPRFVP 376
PHSCHLQYMENMNSIASLVMAVV+N+ + E D+ QKRKRLWGLVVCHNTTPRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVINEGDYEVAGPDSAQTQKRKRLWGLVVCHNTTPRFVP 379
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 436
FPLRYACEFLAQVFAIHVNKELELE Q++EKNILRTQTLLCDML+RDAPLGIV+Q+PNIM
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELEDQMIEKNILRTQTLLCDMLLRDAPLGIVSQTPNIM 439
Query: 437 DLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALA 496
DLVKCDGAALLYKNKIWRLG+TP+DFQ+ DI WLSE HMDSTGLS DSLYDAG+ GALA
Sbjct: 440 DLVKCDGAALLYKNKIWRLGLTPSDFQIQDISLWLSECHMDSTGLSTDSLYDAGFPGALA 499
Query: 497 LGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEV 556
LGDV CGMAAV+I+ KD+IFWFRS TA+E+RWGGAKH+PDEKD+G KMHPRSSFKAFLEV
Sbjct: 500 LGDVACGMAAVKITSKDIIFWFRSHTAAEIRWGGAKHDPDEKDNGWKMHPRSSFKAFLEV 559
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTS 616
KTRSLPWKDYEMDAIHSLQLILRNAFKDVG + ++ I +L DLKI+G++ELEAVT
Sbjct: 560 AKTRSLPWKDYEMDAIHSLQLILRNAFKDVGDMAVNNNGIQMQLSDLKIDGVQELEAVTG 619
Query: 617 EMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRM 676
EMVRLIETA+VPILAVD++G VNGWNTKI+ELTGL VDKAIGK+ LTLVE+SS V RM
Sbjct: 620 EMVRLIETASVPILAVDIEGSVNGWNTKISELTGLPVDKAIGKNLLTLVEESSTSMVGRM 679
Query: 677 LYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKT 736
L LALQG+EEQNIQFEIKTHG++ + PI+L+VNACASRD+H+NVVGVCFVAQDIT QK
Sbjct: 680 LELALQGKEEQNIQFEIKTHGARADFGPISLVVNACASRDIHENVVGVCFVAQDITGQKI 739
Query: 737 VMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLA 796
VMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWNPAM KLTGWKREEV+DK+LL
Sbjct: 740 VMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMTKLTGWKREEVMDKMLLG 799
Query: 797 EVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLD 856
EVFG +MACC LKNQEAFVNLG+V+N+AM+G+ EKVPFGF+ R GKY ECLLCV+KKLD
Sbjct: 800 EVFGIHMACCPLKNQEAFVNLGVVINRAMTGEVSEKVPFGFWNRGGKYTECLLCVSKKLD 859
Query: 857 REGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKM 916
EGAVTGVFCFLQLAS ELQQALHVQRLSEQTA+KR KALAY KRQIRNPLSGI+FSRKM
Sbjct: 860 SEGAVTGVFCFLQLASPELQQALHVQRLSEQTAVKRFKALAYIKRQIRNPLSGILFSRKM 919
Query: 917 MEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQ 976
+EGTELGAEQK+L+HTSAQCQ+QL KILDDSDLDSIIDGYLDLEMVEFTL EVLVASISQ
Sbjct: 920 IEGTELGAEQKQLIHTSAQCQQQLSKILDDSDLDSIIDGYLDLEMVEFTLQEVLVASISQ 979
Query: 977 VMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLT 1036
VM+KSNAK IR V + E+IM+ETLYGDS+RLQQVLADF+S+S+N++P GGQL ++++LT
Sbjct: 980 VMIKSNAKSIRTVQDANEEIMTETLYGDSLRLQQVLADFISVSVNYMPPGGQLTLATNLT 1039
Query: 1037 KDQLGQSVHLAYLELR 1052
KDQLGQSVHLA+LE R
Sbjct: 1040 KDQLGQSVHLAHLEFR 1055
>gi|130185|sp|P06592.1|PHYA_CUCPE RecName: Full=Phytochrome A
gi|167501|gb|AAA33115.1| phytochrome [Cucurbita pepo]
gi|225435|prf||1303260A phytochrome
Length = 1124
Score = 1803 bits (4671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 850/1034 (82%), Positives = 937/1034 (90%), Gaps = 2/1034 (0%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLI 80
R+IAQT++DA + ADFE SG SFDYS+SVRV+S GDQQPRSD+VTTAYLHHIQKGKLI
Sbjct: 21 RIIAQTSVDANVQADFEESGNSFDYSSSVRVTSDVSGDQQPRSDKVTTAYLHHIQKGKLI 80
Query: 81 QPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASA 140
QPFGCLLALD+KTFKVIAYSENAPE+LTMV+HAVPS+GD+PVLGIG+D++TIFTAPSASA
Sbjct: 81 QPFGCLLALDDKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAPSASA 140
Query: 141 LQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQS 200
L KALGFGEV+LLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYE P+TAAGALQS
Sbjct: 141 LLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEGPVTAAGALQS 200
Query: 201 YKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSG 260
YKLAAKAITRLQSLPSGSM RLCDTM+QEVFELTGYDRVMAYKFH+DDHGEV+SE+ K G
Sbjct: 201 YKLAAKAITRLQSLPSGSMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVAKPG 260
Query: 261 LEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAP 320
L+PYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA+H+KVLQDEKL FDLTLCGSTLRAP
Sbjct: 261 LQPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGSTLRAP 320
Query: 321 HSCHLQYMENMNSIASLVMAVVVN--DEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFP 378
HSCHLQYMENMNSIASLVMAVVVN DEE EG QKRKRLWGLVVCHN++PRFVPFP
Sbjct: 321 HSCHLQYMENMNSIASLVMAVVVNEGDEENEGPALQQQKRKRLWGLVVCHNSSPRFVPFP 380
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
LRYACEFLAQVFAIHVNKELELE QI+EKNILRTQTLLCDMLMRDAPLGIV++SPNIMDL
Sbjct: 381 LRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDL 440
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
VK DGAALLYK KIWRLG+TPNDFQL DI SWLSEYHMDSTGLS DSLYDAGY GA+ALG
Sbjct: 441 VKSDGAALLYKKKIWRLGLTPNDFQLLDIASWLSEYHMDSTGLSTDSLYDAGYPGAIALG 500
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVK 558
D VCGMAAVRI+ DMIFWFRS TASE+RWGGAKHE +KDD RKMHPRSSFKAFLEVVK
Sbjct: 501 DEVCGMAAVRITNNDMIFWFRSHTASEIRWGGAKHEHGQKDDARKMHPRSSFKAFLEVVK 560
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEM 618
TRSLPWKDYEMDAIHSLQLILRN FKD +++ KSI + L DLKIEG +ELE+VTSEM
Sbjct: 561 TRSLPWKDYEMDAIHSLQLILRNTFKDTDATEINRKSIQTTLGDLKIEGRQELESVTSEM 620
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLY 678
VRLIETATVPILAVD+DGL+NGWNTKIAELTGL VDKAIGKH LTLVEDSS++ V++ML+
Sbjct: 621 VRLIETATVPILAVDLDGLINGWNTKIAELTGLPVDKAIGKHLLTLVEDSSVEVVRKMLF 680
Query: 679 LALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVM 738
LALQGQEEQN+QFEIKTHGS I I+L+VNACASRDL +NVVGV FVAQDIT QK VM
Sbjct: 681 LALQGQEEQNVQFEIKTHGSHIEVGSISLVVNACASRDLRENVVGVFFVAQDITGQKMVM 740
Query: 739 DKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEV 798
DKFTR+EGDYKAIVQNPNPLIPPIFGSDEFGWC EWNPAM KLTGW REEVIDK+LL EV
Sbjct: 741 DKFTRLEGDYKAIVQNPNPLIPPIFGSDEFGWCSEWNPAMAKLTGWSREEVIDKMLLGEV 800
Query: 799 FGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDRE 858
FG + +CCRLKNQEAFVNLGIVLN AM GQDPEK FGF ARNG Y ECLLCVNK LD++
Sbjct: 801 FGVHKSCCRLKNQEAFVNLGIVLNNAMCGQDPEKASFGFLARNGMYVECLLCVNKILDKD 860
Query: 859 GAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMME 918
GAVTG FCFLQL SHELQQAL++QRL EQTALKRL+AL Y KRQI+NPLSGIIFSR+++E
Sbjct: 861 GAVTGFFCFLQLPSHELQQALNIQRLCEQTALKRLRALGYIKRQIQNPLSGIIFSRRLLE 920
Query: 919 GTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVM 978
TELG EQK LL TS CQ+Q+ K+LD+SD+D IIDG++DLEM EFTL+EVL+ SISQVM
Sbjct: 921 RTELGVEQKELLRTSGLCQKQISKVLDESDIDKIIDGFIDLEMDEFTLHEVLMVSISQVM 980
Query: 979 MKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKD 1038
+K KGI+IVNET E+ MSETLYGDS+RLQQVLADFL IS+++ P+GGQL +S+ +TK+
Sbjct: 981 LKIKGKGIQIVNETPEEAMSETLYGDSLRLQQVLADFLLISVSYAPSGGQLTISTDVTKN 1040
Query: 1039 QLGQSVHLAYLELR 1052
QLG+SVHL +LE R
Sbjct: 1041 QLGKSVHLVHLEFR 1054
>gi|449458035|ref|XP_004146753.1| PREDICTED: phytochrome A-like [Cucumis sativus]
Length = 1123
Score = 1803 bits (4669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 859/1034 (83%), Positives = 940/1034 (90%), Gaps = 2/1034 (0%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLI 80
R+IAQT++DAKLHADFE SG SFDYS+SVRVSS GD QPRSD+VTTAYLHHIQKGKLI
Sbjct: 21 RIIAQTSVDAKLHADFEESGNSFDYSSSVRVSSDVSGDHQPRSDKVTTAYLHHIQKGKLI 80
Query: 81 QPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASA 140
QPFGCLLALDEKTFKVIAYSENAPE+LTMV+HAVPS+GD+PVLGIG+D++TIFTAPSASA
Sbjct: 81 QPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAPSASA 140
Query: 141 LQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQS 200
L KALGFGEV+LLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP+TAAGALQS
Sbjct: 141 LLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPVTAAGALQS 200
Query: 201 YKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSG 260
YKLAAKAITRLQSLPSG M RLCDTM+QEVFELTGYDRVMAYKFH+DDHGEV+SE+TK G
Sbjct: 201 YKLAAKAITRLQSLPSGCMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVTKPG 260
Query: 261 LEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAP 320
LEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA+H+KVLQDEKL FDLTLCGSTLRAP
Sbjct: 261 LEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGSTLRAP 320
Query: 321 HSCHLQYMENMNSIASLVMAVVVN--DEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFP 378
HSCHLQYM NMNSIASLVMAVVVN DE+ EG QKRKRLWGLVVCHNT+PRFVPFP
Sbjct: 321 HSCHLQYMANMNSIASLVMAVVVNEGDEDAEGPALQQQKRKRLWGLVVCHNTSPRFVPFP 380
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
LRYACEFLAQVFAIHVNKELELE QI+EKNILRTQTLLCDMLMRDAPLGIV++SPNIMDL
Sbjct: 381 LRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDL 440
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
VK DGAALLYKNKIWRLG+TP+DF L DI SWL+EYHMDSTGLS DSLYDAGY GALALG
Sbjct: 441 VKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLAEYHMDSTGLSTDSLYDAGYPGALALG 500
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVK 558
D VCGMAAVRI+ DMIFWFRS TASE+RWGGAKHE EKDDGRKMHPRSSFKAFLEVVK
Sbjct: 501 DEVCGMAAVRITTNDMIFWFRSHTASEIRWGGAKHEHGEKDDGRKMHPRSSFKAFLEVVK 560
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEM 618
TRSLPWKDYEMDAIHSLQLILRN FKD T +++ KSI L DLKIEG +ELE+VTSEM
Sbjct: 561 TRSLPWKDYEMDAIHSLQLILRNTFKDTDTDEINRKSIQMTLGDLKIEGRQELESVTSEM 620
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLY 678
VRLIETATVPILAVDVDGL+NGWNTKIAELTGL VDKAIGKH LTLVED+S++ VK+MLY
Sbjct: 621 VRLIETATVPILAVDVDGLINGWNTKIAELTGLPVDKAIGKHLLTLVEDTSVEVVKKMLY 680
Query: 679 LALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVM 738
LALQGQEEQN+QFEIKTHGS I I L+VNACASRDL +NVVGVCFVAQDIT QK VM
Sbjct: 681 LALQGQEEQNVQFEIKTHGSHIEVGSIRLVVNACASRDLRENVVGVCFVAQDITGQKMVM 740
Query: 739 DKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEV 798
DKFTR+EGDYKAIVQNPNPLIPPIFGSD+FGWC EWN AM KLTGW REEVIDK+LL EV
Sbjct: 741 DKFTRLEGDYKAIVQNPNPLIPPIFGSDQFGWCSEWNAAMTKLTGWSREEVIDKMLLGEV 800
Query: 799 FGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDRE 858
FG + +CCRLKNQEAFVNLG+VLN AMSGQDPEKV FGFF RNG Y ECLLCVNK LD++
Sbjct: 801 FGAHKSCCRLKNQEAFVNLGVVLNNAMSGQDPEKVSFGFFGRNGMYVECLLCVNKILDKD 860
Query: 859 GAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMME 918
G VTGVFCFLQLASHELQQAL++QRL EQTALKRL+AL Y KR I+NPLSGIIFSR+++E
Sbjct: 861 GVVTGVFCFLQLASHELQQALNIQRLCEQTALKRLRALGYIKRHIQNPLSGIIFSRRLLE 920
Query: 919 GTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVM 978
TELG EQ+ +L TS CQ+Q+ K+L++SDLD IIDG++DLEMVEFTL+EVL SISQVM
Sbjct: 921 RTELGTEQREILLTSLHCQKQISKVLEESDLDQIIDGFIDLEMVEFTLHEVLKVSISQVM 980
Query: 979 MKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKD 1038
+KS K I+IVNET E+ MSETLYGDS+RLQQVLADFL +S+++ P GGQL +S++LTKD
Sbjct: 981 IKSKGKAIQIVNETVEEAMSETLYGDSLRLQQVLADFLLLSVSYAPAGGQLKISTNLTKD 1040
Query: 1039 QLGQSVHLAYLELR 1052
QLG+SVHL +LE R
Sbjct: 1041 QLGKSVHLVHLEFR 1054
>gi|3914343|sp|O49934.1|PHYA_POPTM RecName: Full=Phytochrome A
gi|2664190|emb|CAA04679.1| phytochrome A [Populus tremula x Populus tremuloides]
Length = 1125
Score = 1802 bits (4668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 876/1040 (84%), Positives = 943/1040 (90%), Gaps = 10/1040 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
AR+IAQTT+DAKLHADFE SG+SFDYS+SVRV+ + GGDQ PRSD+VTTAYLHHIQKGKL
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKL 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQPFGCLLALDEKTF+V+AYSENAPELLTMV+HAVPSVG+HPVLGIG+DI+TIFTAPSAS
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
ALQKA+GFG+VSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDR MAYKFH+DDHGEVVSE+TK
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
G+EPYLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HVKVLQDEKLPFDLTLCGSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQKRKRLWGLVVCHNTTPRFVP 376
PHSCHLQYMENMNSIASLVMAVVVND +E+GD + PQKRKRLWGLVVCHNT+PRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVP 379
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 436
FPLRYACEFLAQVFAIHVNKELELE QI+EKNILRTQTLLCDMLMRDAPLGIVTQSPNIM
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 437 DLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALA 496
DLVKCDGA L Y+NKIWRLG+TP+D QL DI WLSEYHMDSTGLS DSLYDAGY GALA
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 497 LGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEV 556
LGDVVCGMAAVRI+ KDM+FWFRSQTA+E+RWGGAKHEP EKDDGR+MHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTS 616
VKTRSLPWKDYEMDAIHSLQLILRN FKD+ T+D+DTK+IH++L DLKIEGM+ELEAVTS
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 617 EMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRM 676
EMVRLIETATVPILAVDVDGLVNGWNTKI+ELTGL VDKAIGKH LTLVEDSS+D VKRM
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRM 679
Query: 677 LYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKT 736
L+LALQG+EEQNIQFEIKTHGSK PI L+VNACASRDLH+NVVGVCFV QDIT QK
Sbjct: 680 LFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQKM 739
Query: 737 VMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLA 796
VMDKFTRIEGDYKAIVQN NPLIPPIFG+DEFGWC EWNPAM LTGWKREEV+DK+LL
Sbjct: 740 VMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLG 799
Query: 797 EVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLD 856
EVFG NMACCRLKNQEAFVNLG+VLN AM+GQ+ EKV FGFFAR GKY ECLLCV+KKLD
Sbjct: 800 EVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLD 859
Query: 857 REGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKM 916
REGAVTGVFCFLQLAS ELQQALHVQRLSEQTALKRLKALAY K+QI NPLSGIIFS KM
Sbjct: 860 REGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIFSGKM 919
Query: 917 MEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQ 976
MEGTELGAEQK LLHTSAQCQ QL KILDDSDLDSII+GYLDLEMVEFTL E S
Sbjct: 920 MEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREYYGCYQSS 979
Query: 977 VMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLT 1036
K + KGI I+N+ + M+ETLYGDSIRLQQVLADF + P+GG L VS+S
Sbjct: 980 HDEK-HEKGIPIINDALK--MAETLYGDSIRLQQVLADFCRCQLILTPSGGLLTVSASFF 1036
Query: 1037 KDQLGQS----VHLAYLELR 1052
+ +G VH L +R
Sbjct: 1037 QRPVGAILFILVHSGKLRIR 1056
>gi|449505651|ref|XP_004162532.1| PREDICTED: LOW QUALITY PROTEIN: phytochrome A-like [Cucumis sativus]
Length = 1123
Score = 1800 bits (4663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 858/1034 (82%), Positives = 939/1034 (90%), Gaps = 2/1034 (0%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLI 80
R+IAQT++DAKLHADFE SG SFDYS+SVRVSS GD QPRSD+VTTAYLHHIQKGKLI
Sbjct: 21 RIIAQTSVDAKLHADFEESGNSFDYSSSVRVSSDVSGDHQPRSDKVTTAYLHHIQKGKLI 80
Query: 81 QPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASA 140
QPFGCLLALD KTFKVIAYSENAPE+LTMV+HAVPS+GD+PVLGIG+D++TIFTAPSASA
Sbjct: 81 QPFGCLLALDXKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAPSASA 140
Query: 141 LQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQS 200
L KALGFGEV+LLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP+TAAGALQS
Sbjct: 141 LLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPVTAAGALQS 200
Query: 201 YKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSG 260
YKLAAKAITRLQSLPSG M RLCDTM+QEVFELTGYDRVMAYKFH+DDHGEV+SE+TK G
Sbjct: 201 YKLAAKAITRLQSLPSGCMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVTKPG 260
Query: 261 LEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAP 320
LEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA+H+KVLQDEKL FDLTLCGSTLRAP
Sbjct: 261 LEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGSTLRAP 320
Query: 321 HSCHLQYMENMNSIASLVMAVVVN--DEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFP 378
HSCHLQYM NMNSIASLVMAVVVN DE+ EG QKRKRLWGLVVCHNT+PRFVPFP
Sbjct: 321 HSCHLQYMANMNSIASLVMAVVVNEGDEDAEGPALQQQKRKRLWGLVVCHNTSPRFVPFP 380
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
LRYACEFLAQVFAIHVNKELELE QI+EKNILRTQTLLCDMLMRDAPLGIV++SPNIMDL
Sbjct: 381 LRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDL 440
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
VK DGAALLYKNKIWRLG+TP+DF L DI SWL+EYHMDSTGLS DSLYDAGY GALALG
Sbjct: 441 VKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLAEYHMDSTGLSTDSLYDAGYPGALALG 500
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVK 558
D VCGMAAVRI+ DMIFWFRS TASE+RWGGAKHE EKDDGRKMHPRSSFKAFLEVVK
Sbjct: 501 DEVCGMAAVRITTNDMIFWFRSHTASEIRWGGAKHEHGEKDDGRKMHPRSSFKAFLEVVK 560
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEM 618
TRSLPWKDYEMDAIHSLQLILRN FKD T +++ KSI L DLKIEG +ELE+VTSEM
Sbjct: 561 TRSLPWKDYEMDAIHSLQLILRNTFKDTDTDEINRKSIQMTLGDLKIEGRQELESVTSEM 620
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLY 678
VRLIETATVPILAVDVDGL+NGWNTKIAELTGL VDKAIGKH LTLVED+S++ VK+MLY
Sbjct: 621 VRLIETATVPILAVDVDGLINGWNTKIAELTGLPVDKAIGKHLLTLVEDTSVEVVKKMLY 680
Query: 679 LALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVM 738
LALQGQEEQN+QFEIKTHGS I I L+VNACASRDL +NVVGVCFVAQDIT QK VM
Sbjct: 681 LALQGQEEQNVQFEIKTHGSHIEVGSIRLVVNACASRDLRENVVGVCFVAQDITGQKMVM 740
Query: 739 DKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEV 798
DKFTR+EGDYKAIVQNPNPLIPPIFGSD+FGWC EWN AM KLTGW REEVIDK+LL EV
Sbjct: 741 DKFTRLEGDYKAIVQNPNPLIPPIFGSDQFGWCSEWNAAMTKLTGWSREEVIDKMLLGEV 800
Query: 799 FGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDRE 858
FG + +CCRLKNQEAFVNLG+VLN AMSGQDPEKV FGFF RNG Y ECLLCVNK LD++
Sbjct: 801 FGAHKSCCRLKNQEAFVNLGVVLNNAMSGQDPEKVSFGFFGRNGMYVECLLCVNKILDKD 860
Query: 859 GAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMME 918
G VTGVFCFLQLASHELQQAL++QRL EQTALKRL+AL Y KR I+NPLSGIIFSR+++E
Sbjct: 861 GVVTGVFCFLQLASHELQQALNIQRLCEQTALKRLRALGYIKRHIQNPLSGIIFSRRLLE 920
Query: 919 GTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVM 978
TELG EQ+ +L TS CQ+Q+ K+L++SDLD IIDG++DLEMVEFTL+EVL SISQVM
Sbjct: 921 RTELGTEQREILLTSLHCQKQISKVLEESDLDQIIDGFIDLEMVEFTLHEVLKVSISQVM 980
Query: 979 MKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKD 1038
+KS K I+IVNET E+ MSETLYGDS+RLQQVLADFL +S+++ P GGQL +S++LTKD
Sbjct: 981 IKSKGKAIQIVNETVEEAMSETLYGDSLRLQQVLADFLLLSVSYAPAGGQLKISTNLTKD 1040
Query: 1039 QLGQSVHLAYLELR 1052
QLG+SVHL +LE R
Sbjct: 1041 QLGKSVHLVHLEFR 1054
>gi|357441993|ref|XP_003591274.1| Phytochrome A [Medicago truncatula]
gi|355480322|gb|AES61525.1| Phytochrome A [Medicago truncatula]
Length = 1171
Score = 1794 bits (4646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 866/1054 (82%), Positives = 969/1054 (91%), Gaps = 3/1054 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS++RP+QSS+N+G+SR+SAR+IAQTT+DAKLHA FE SG+SFDYS+SVRVS + G+ Q
Sbjct: 48 MSTTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGEHQ 107
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRS++VTTAYL+ IQ+GK IQPFGCLLALDEKT KVIAYSENAPE+LTMV+HAVPSVGDH
Sbjct: 108 PRSNKVTTAYLNTIQRGKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDH 167
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
P LGIG+DI+TIFTAPSASALQKALGF EVSLLNPILVHCKTSGKPFYAI+HRVTGSLII
Sbjct: 168 PALGIGTDIRTIFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 227
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 228 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 287
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEV++E+TK+GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 288 AYKFHEDDHGEVIAEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKV 347
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQK 357
LQDEKLPFDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVND +E+GD+ LPQK
Sbjct: 348 LQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQK 407
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
+KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE+QILEKNILRTQTLLC
Sbjct: 408 KKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEFQILEKNILRTQTLLC 467
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLY+NK+W LG TP++ Q+ +I W+SEYH D
Sbjct: 468 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYRNKLWILGATPSEPQIREIALWMSEYHTD 527
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAG+ GAL L D VCGMAAVRI+ KD++FWFRS TA+E+RWGGAKHEP E
Sbjct: 528 STGLSTDSLSDAGFPGALKLNDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGE 587
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DDGRKMHPRSSFKAFLEVVK RS+PWKD+EMDAIHSLQLILRNA KD +DL++K+I+
Sbjct: 588 QDDGRKMHPRSSFKAFLEVVKARSIPWKDFEMDAIHSLQLILRNASKDTDMIDLNSKAIN 647
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
++L DLKIEGM+ELEAVTSEMVRLIETATVPILAVDVDG+VNGWN KI+ELTGL V +AI
Sbjct: 648 TRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGMVNGWNIKISELTGLPVGEAI 707
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS D VK+ML LALQGQEE+N+QFEIKTHGSK + PI+LIVNACASRDL
Sbjct: 708 GKHLLTLVEDSSTDIVKKMLNLALQGQEEKNVQFEIKTHGSKTDCGPISLIVNACASRDL 767
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPA 777
H+NVVGVCFVAQDIT QKTVMDKFTRIEGDYKAIVQNPN LIPPIFG+DEFGWCCEWN A
Sbjct: 768 HENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAA 827
Query: 778 MVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGF 837
M+K+TGWKREEV+DK+LL EVFGT+M+CCRLKNQEAFVN GIVLNKAM+G + EKVPFGF
Sbjct: 828 MIKITGWKREEVMDKMLLGEVFGTHMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGF 887
Query: 838 FARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALA 897
+R GKY ECLL V+KK+D EG VTGVFCFLQLAS ELQQALH+QRLSEQTALKRLK L
Sbjct: 888 LSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLT 947
Query: 898 YTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYL 957
Y +RQIRNPLSGI+FS KM+E TELG EQKR+++TS+QCQRQL KILDDSDLDSIIDGYL
Sbjct: 948 YMRRQIRNPLSGIVFSSKMLENTELGTEQKRIVNTSSQCQRQLSKILDDSDLDSIIDGYL 1007
Query: 958 DLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLS 1017
DLEM EFTL+EVLV S+SQVM +SN + IRIVN+ AE I ETLYGDS+RLQQVLADFL
Sbjct: 1008 DLEMAEFTLHEVLVTSLSQVMNRSNTRSIRIVNDVAEHIAMETLYGDSLRLQQVLADFLL 1067
Query: 1018 ISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLEL 1051
ISIN PNGGQ++++++LTK+QLG+SVHL LEL
Sbjct: 1068 ISINSTPNGGQVVIAATLTKEQLGKSVHLVNLEL 1101
>gi|371940260|dbj|BAL45567.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 1777 bits (4602), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 868/1053 (82%), Positives = 965/1053 (91%), Gaps = 2/1053 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS+SRP+QSS N+G+SR SAR +A T+DAKLHA FE SG+SFDYS+SVR+S TA G Q
Sbjct: 1 MSTSRPSQSSRNSGRSRRSARAMALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQ 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PR D+VTTAYLHH+QKGK+IQPFGCLLALDEKT KVIAYSENAPE+LTMV+HAVPSVGDH
Sbjct: 61 PRHDKVTTAYLHHMQKGKMIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
P LGIG+DIKT+FTAPSASALQKALGF EVSLLNP+L+HCKTSGKPFYAI+HRVTGS+II
Sbjct: 121 PALGIGTDIKTLFTAPSASALQKALGFAEVSLLNPVLIHCKTSGKPFYAIIHRVTGSMII 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEV++EITK GLE YLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HV+V
Sbjct: 241 AYKFHEDDHGEVIAEITKPGLELYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKR 358
LQDEKLPFDLTLCGSTLRAPHSCH QYM NM+SIASLVMAVVVND EE+GD PQKR
Sbjct: 301 LQDEKLPFDLTLCGSTLRAPHSCHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKR 360
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELEYQI+EKNILRTQTLLCD
Sbjct: 361 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCD 420
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
++MRDAPLGIV++SPNIMDLVKCDGAAL+YKNK+WRLGVTP++ Q+ +I WLSEYHMDS
Sbjct: 421 LVMRDAPLGIVSESPNIMDLVKCDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDS 480
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TG S DSL DAG+ AL+LGDVVCGMAAVR++ KD++FWFRS TA+E+RWGGAKHE EK
Sbjct: 481 TGFSTDSLSDAGFPSALSLGDVVCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEK 540
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DDGR+MHPRSSFK FL+VVK RSLPWK+YE+DA+HSLQLILRNAFKD ++DL+TK+I++
Sbjct: 541 DDGRRMHPRSSFKVFLDVVKARSLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINT 600
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
+L DLKIEGM+ELEAVTSE+VRLIETATVPILAVDVDGLVNGWN KIAELTGL V +A+G
Sbjct: 601 RLSDLKIEGMQELEAVTSEIVRLIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMG 660
Query: 659 KHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLH 718
KH LTLVEDSS D VK+ML LAL G+EE+N+QFEIKTHGSK++ PI+L+VNACASRDL
Sbjct: 661 KHLLTLVEDSSTDRVKKMLNLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLR 720
Query: 719 DNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAM 778
DNVVGVCFVA DIT QK VMDKFTRIEGDYKAIVQN NPLIPPIFG+DEFGWCCEWNPAM
Sbjct: 721 DNVVGVCFVAHDITAQKNVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAM 780
Query: 779 VKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFF 838
KLTGWKREEV+DK+LL E+FGT+MA CRLKNQEAFVNLG+VLNKAM+G + EKVPFGFF
Sbjct: 781 TKLTGWKREEVMDKMLLGELFGTHMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFF 840
Query: 839 ARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAY 898
ARNGKY ECLL V+KKLD EG VTGVFCFLQLAS ELQQALH+QRLSEQTALKRL AL+Y
Sbjct: 841 ARNGKYVECLLSVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSY 900
Query: 899 TKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLD 958
KRQIRNPL GIIFSRKM+EGT LG EQK+LL TSAQCQ+QL KILDDSDLDSIIDGYLD
Sbjct: 901 MKRQIRNPLCGIIFSRKMLEGTALGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLD 960
Query: 959 LEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSI 1018
LEM EFTL+EVLV S+SQVM KSN K IRIVN+ AEQI+ ETLYGDS+RLQQVLADFL I
Sbjct: 961 LEMAEFTLHEVLVTSLSQVMTKSNGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLI 1020
Query: 1019 SINFVPNGGQLMVSSSLTKDQLGQSVHLAYLEL 1051
SINF PNGGQ++V+ +LTK+QLG+SVHL LEL
Sbjct: 1021 SINFTPNGGQVVVAGTLTKEQLGKSVHLVKLEL 1053
>gi|371940244|dbj|BAL45559.1| Phytochrome A2 [Glycine soja]
gi|371940246|dbj|BAL45560.1| Phytochrome A2 [Glycine soja]
gi|371940248|dbj|BAL45561.1| Phytochrome A2 [Glycine soja]
gi|371940250|dbj|BAL45562.1| Phytochrome A2 [Glycine soja]
gi|371940252|dbj|BAL45563.1| Phytochrome A2 [Glycine soja]
gi|371940256|dbj|BAL45565.1| Phytochrome A2 [Glycine soja]
gi|371940258|dbj|BAL45566.1| Phytochrome A2 [Glycine soja]
gi|371940262|dbj|BAL45568.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 1774 bits (4595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 854/1031 (82%), Positives = 947/1031 (91%), Gaps = 2/1031 (0%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQP 82
+A T+DAKLHA FE SG+SFDYS+SVR+S TA G QPR D+VTTAYLHH+QKGK+IQP
Sbjct: 23 MALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQP 82
Query: 83 FGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQ 142
FGCLLALDEKT KVIAYSENAPE+LTMV+HAVPSVGDHP LGIG+DIKT+FTAPSASALQ
Sbjct: 83 FGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQ 142
Query: 143 KALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 202
KALGF EVSLLNP+L+HCKTSGKPFYAI+HRVTGS+IIDFEPVKPYEVPMTAAGALQSYK
Sbjct: 143 KALGFAEVSLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 202
Query: 203 LAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLE 262
LAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV++EITK GLE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 262
Query: 263 PYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHS 322
PYLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HV+VLQDEKLPFDLTLCGSTLRAPHS
Sbjct: 263 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 322
Query: 323 CHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLR 380
CH QYM NM+SIASLVMAVVVND EE+GD PQKRKRLWGLVVCHNTTPRFVPFPLR
Sbjct: 323 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 382
Query: 381 YACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVK 440
YACEFLAQVFAIHVNKE+ELEYQI+EKNILRTQTLLCD++MRDAPLGIV++SPNIMDLVK
Sbjct: 383 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 442
Query: 441 CDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDV 500
CDGAAL+YKNK+WRLGVTP++ Q+ +I WLSEYHMDSTG S DSL DAG+ AL+LGDV
Sbjct: 443 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDV 502
Query: 501 VCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTR 560
VCGMAAVR++ KD++FWFRS TA+E+RWGGAKHE EKDDGR+MHPRSSFK FL+VVK R
Sbjct: 503 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 562
Query: 561 SLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVR 620
SLPWK+YE+DA+HSLQLILRNAFKD ++DL+TK+I+++L DLKIEGM+ELEAVTSE+VR
Sbjct: 563 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 622
Query: 621 LIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLA 680
LIETATVPILAVDVDGLVNGWN KIAELTGL V +A+GKH LTLVEDSS D VK+ML LA
Sbjct: 623 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLA 682
Query: 681 LQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDK 740
L G+EE+N+QFEIKTHGSK++ PI+L+VNACASRDL DNVVGVCFVA DIT QK VMDK
Sbjct: 683 LLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDK 742
Query: 741 FTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFG 800
FTRIEGDYKAIVQN NPLIPPIFG+DEFGWCCEWNPAM KLTGWKREEV+DK+LL E+FG
Sbjct: 743 FTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELFG 802
Query: 801 TNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGA 860
T+MA CRLKNQEAFVNLG+VLNKAM+G + EKVPFGFFARNGKY ECLL V+KKLD EG
Sbjct: 803 THMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEGL 862
Query: 861 VTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGT 920
VTGVFCFLQLAS ELQQALH+QRLSEQTALKRL AL+Y KRQIRNPL GIIFSRKM+EGT
Sbjct: 863 VTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLEGT 922
Query: 921 ELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMK 980
LG EQK+LL TSAQCQ+QL KILDDSDLDSIIDGYLDLEM EFTL+EVLV S+SQVM K
Sbjct: 923 ALGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQVMTK 982
Query: 981 SNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQL 1040
SN K IRIVN+ AEQI+ ETLYGDS+RLQQVLADFL ISINF PNGGQ++V+ +LTK+QL
Sbjct: 983 SNGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLISINFTPNGGQVVVAGTLTKEQL 1042
Query: 1041 GQSVHLAYLEL 1051
G+SVHL LEL
Sbjct: 1043 GKSVHLVKLEL 1053
>gi|371940254|dbj|BAL45564.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 1773 bits (4591), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 854/1031 (82%), Positives = 946/1031 (91%), Gaps = 2/1031 (0%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQP 82
+A T+DAKLHA FE SG+SFDYS+SVR+S TA G QPR D+VTTAYLHH+QKGK+IQP
Sbjct: 23 MALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQP 82
Query: 83 FGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQ 142
FGCLLALDEKT KVIAYSENAPE+LTMV+HAVPSVGDHP LGIG+DIKT+FTAPSASALQ
Sbjct: 83 FGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQ 142
Query: 143 KALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 202
KALGF EVSLLNP+L+HCKTSGKPFYAI+HRVTGS+IIDFEPVKPYEVPMTAAGALQSYK
Sbjct: 143 KALGFAEVSLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 202
Query: 203 LAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLE 262
LAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV++EITK GLE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 262
Query: 263 PYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHS 322
PYLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HV+VLQDEKLPFDLTLCGSTLRAPHS
Sbjct: 263 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 322
Query: 323 CHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLR 380
CH QYM NM+SIASLVMAVVVND EE+GD PQKRKRLWGLVVCHNTTPRFVPFPLR
Sbjct: 323 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 382
Query: 381 YACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVK 440
YACEFLAQVFAIHVNKE+ELEYQI+EKNILRTQTLLCD++MRDAPLGIV++SPNIMDLVK
Sbjct: 383 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 442
Query: 441 CDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDV 500
CDGAAL+YKNK+WRLGVTP++ Q+ +I WLSEYHMDSTG S DSL DAG+ AL+LGDV
Sbjct: 443 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDV 502
Query: 501 VCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTR 560
VCGMAAVR++ KD++FWFRS TA+E+RWGGAKHE EKDDGR+MHPRSSFK FL+VVK R
Sbjct: 503 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 562
Query: 561 SLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVR 620
SLPWK+YE+DA+HSLQLILRNAFKD ++DL+TK+I+++L DLKIEGM+ELEAVTSE+VR
Sbjct: 563 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 622
Query: 621 LIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLA 680
LIETATVPILAVDVDGLVNGWN KIAELTGL V +A+GKH LTLVEDSS D VK+ML LA
Sbjct: 623 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLA 682
Query: 681 LQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDK 740
L G+EE+N+QFEIKTHGSK++ PI+L+VNACASRDL DNVVGVCFVA DIT QK VMDK
Sbjct: 683 LLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDK 742
Query: 741 FTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFG 800
FTRIEGDYKAIVQN NPLIPPIFG+DEFGWCCEWNPAM KLTGWKREEV+DK+LL E+FG
Sbjct: 743 FTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELFG 802
Query: 801 TNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGA 860
T+MA CRLKNQEAFVNLG+VLNKAM+G + EKVPFGFFARNGKY ECLL V+KKLD EG
Sbjct: 803 THMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEGL 862
Query: 861 VTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGT 920
VTGVFCFLQLAS ELQQALH+QRLSEQTALKRL AL Y KRQIRNPL GIIFSRKM+EGT
Sbjct: 863 VTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALNYMKRQIRNPLCGIIFSRKMLEGT 922
Query: 921 ELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMK 980
LG EQK+LL TSAQCQ+QL KILDDSDLDSIIDGYLDLEM EFTL+EVLV S+SQVM K
Sbjct: 923 ALGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQVMTK 982
Query: 981 SNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQL 1040
SN K IRIVN+ AEQI+ ETLYGDS+RLQQVLADFL ISINF PNGGQ++V+ +LTK+QL
Sbjct: 983 SNGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLISINFTPNGGQVVVAGTLTKEQL 1042
Query: 1041 GQSVHLAYLEL 1051
G+SVHL LEL
Sbjct: 1043 GKSVHLVKLEL 1053
>gi|359806634|ref|NP_001241532.1| phytochrome type A-like [Glycine max]
gi|190586157|gb|ACE79195.1| phytochrome A-1 [Glycine max]
gi|207367150|dbj|BAG72095.1| phytochrome A [Glycine max]
gi|371940264|dbj|BAL45569.1| Phytochrome A2 [Glycine max]
Length = 1123
Score = 1771 bits (4588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 853/1031 (82%), Positives = 946/1031 (91%), Gaps = 2/1031 (0%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQP 82
+A T+DAKLHA FE SG+SFDYS+SVR+S TA G QPR D+VTTAYLHH+QKGK+IQP
Sbjct: 23 MALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQP 82
Query: 83 FGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQ 142
FGCLLALDEKT KVIAYSENAPE+LTMV+HAVPSVGDHP LGIG+DIKT+FTAPSASALQ
Sbjct: 83 FGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQ 142
Query: 143 KALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 202
KALGF EV LLNP+L+HCKTSGKPFYAI+HRVTGS+IIDFEPVKPYEVPMTAAGALQSYK
Sbjct: 143 KALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 202
Query: 203 LAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLE 262
LAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV++EITK GLE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 262
Query: 263 PYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHS 322
PYLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HV+VLQDEKLPFDLTLCGSTLRAPHS
Sbjct: 263 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 322
Query: 323 CHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLR 380
CH QYM NM+SIASLVMAVVVND EE+GD PQKRKRLWGLVVCHNTTPRFVPFPLR
Sbjct: 323 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 382
Query: 381 YACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVK 440
YACEFLAQVFAIHVNKE+ELEYQI+EKNILRTQTLLCD++MRDAPLGIV++SPNIMDLVK
Sbjct: 383 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 442
Query: 441 CDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDV 500
CDGAAL+YKNK+WRLGVTP++ Q+ +I WLSEYHMDSTG S DSL DAG+ AL+LGDV
Sbjct: 443 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDV 502
Query: 501 VCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTR 560
VCGMAAVR++ KD++FWFRS TA+E+RWGGAKHE EKDDGR+MHPRSSFK FL+VVK R
Sbjct: 503 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 562
Query: 561 SLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVR 620
SLPWK+YE+DA+HSLQLILRNAFKD ++DL+TK+I+++L DLKIEGM+ELEAVTSE+VR
Sbjct: 563 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 622
Query: 621 LIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLA 680
LIETATVPILAVDVDGLVNGWN KIAELTGL V +A+GKH LTLVEDSS D VK+ML LA
Sbjct: 623 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLA 682
Query: 681 LQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDK 740
L G+EE+N+QFEIKTHGSK++ PI+L+VNACASRDL DNVVGVCFVA DIT QK VMDK
Sbjct: 683 LLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDK 742
Query: 741 FTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFG 800
FTRIEGDYKAIVQN NPLIPPIFG+DEFGWCCEWNPAM KLTGWKREEV+DK+LL E+FG
Sbjct: 743 FTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELFG 802
Query: 801 TNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGA 860
T+MA CRLKNQEAFVNLG+VLNKAM+G + EKVPFGFFARNGKY ECLL V+KKLD EG
Sbjct: 803 THMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEGL 862
Query: 861 VTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGT 920
VTGVFCFLQLAS ELQQALH+QRLSEQTALKRL AL+Y KRQIRNPL GIIFSRKM+EGT
Sbjct: 863 VTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLEGT 922
Query: 921 ELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMK 980
LG EQK+LL TSAQCQ+QL KILDDSDLDSIIDGYLDLEM EFTL+EVLV S+SQVM K
Sbjct: 923 ALGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQVMTK 982
Query: 981 SNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQL 1040
SN K IRIVN+ AEQI+ ETLYGDS+RLQQVLADFL ISINF PNGGQ++V+ +LTK+QL
Sbjct: 983 SNGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLISINFTPNGGQVVVAGTLTKEQL 1042
Query: 1041 GQSVHLAYLEL 1051
G+SVHL LEL
Sbjct: 1043 GKSVHLVKLEL 1053
>gi|38037242|gb|AAR08427.1| phytochrome A [Monotropastrum globosum]
Length = 1130
Score = 1771 bits (4586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 842/1059 (79%), Positives = 939/1059 (88%), Gaps = 7/1059 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MSSSRP QSS ++G+S+HSAR+IAQTT+DAKLHADFE SG SFDYS SVR + T GGD Q
Sbjct: 1 MSSSRPTQSSGSSGRSKHSARIIAQTTVDAKLHADFEESGGSFDYSTSVRFTGTVGGDIQ 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTTAYLH IQ+GKLIQPFGCLLA+DEKTFKVIAYSENAPE+LTMV+HAVPSVGDH
Sbjct: 61 PRSDKVTTAYLHQIQRGKLIQPFGCLLAVDEKTFKVIAYSENAPEMLTMVSHAVPSVGDH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
P+LGIG+D++TIFT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII
Sbjct: 121 PLLGIGTDVRTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSG+M LCD M+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMRILCDAMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
YKFH+DDHGEV SE+TK GLEPYLGLHYPATDIPQAARFLFMKNK+RMI DC A+ VKV
Sbjct: 241 VYKFHDDDHGEVFSELTKPGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCHAKQVKV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL------ 354
+QD+KLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VVVN+ +EEGD
Sbjct: 301 IQDDKLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEGDGGGSSVSSN 360
Query: 355 -PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
QK KRLWGL+VCHNTTPRFVPFPLRYACEFLAQVF IHVNKELELE QI EKNILRTQ
Sbjct: 361 QQQKIKRLWGLLVCHNTTPRFVPFPLRYACEFLAQVFTIHVNKELELENQIHEKNILRTQ 420
Query: 414 TLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSE 473
TLLCDMLMRDAPLGIV+QSPN+MDLVKCDGA LLYK+K +R+G TP DFQL DIV WLSE
Sbjct: 421 TLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKDKTYRMGTTPTDFQLRDIVYWLSE 480
Query: 474 YHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKH 533
YH DSTGLS DSLYDAGY GALA GD VCGMAAV+I+ DM+FWF++QTA+E++WGGAKH
Sbjct: 481 YHTDSTGLSTDSLYDAGYPGALAFGDGVCGMAAVKITSNDMLFWFKAQTAAEIQWGGAKH 540
Query: 534 EPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDT 593
E E+DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD +D T
Sbjct: 541 ESGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDTKAMDATT 600
Query: 594 KSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
IH++L DLKIEGM+ELEAVTSEMVRLIETATVPILAVDVDGLVNGWN KIAELTGL V
Sbjct: 601 DVIHTRLHDLKIEGMEELEAVTSEMVRLIETATVPILAVDVDGLVNGWNLKIAELTGLPV 660
Query: 654 DKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
DKAIG+ L+LVEDSS VK+ML LALQG+EEQNIQFE+KT S+ + PI+L+VNACA
Sbjct: 661 DKAIGRDLLSLVEDSSTGIVKKMLDLALQGKEEQNIQFELKTDESRRDSGPISLVVNACA 720
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
SRD H+NVVGVCFVAQDIT KTVMDKFTRIEGDYKAIVQNPNPLIPPI G+DEFGWC E
Sbjct: 721 SRDHHENVVGVCFVAQDITGHKTVMDKFTRIEGDYKAIVQNPNPLIPPILGTDEFGWCSE 780
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM K++GW RE+VI+K+LL EVFGT++ CCRLKNQEAFVNLGIVLN A++G++ EK+
Sbjct: 781 WNLAMEKISGWNREDVINKMLLGEVFGTHVVCCRLKNQEAFVNLGIVLNNAVTGRESEKI 840
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
FGFFARNGKY EC+LC +KK+D EGAVTGVFC LQLAS ELQQALHVQRL+EQTALKR
Sbjct: 841 SFGFFARNGKYVECILCASKKIDGEGAVTGVFCLLQLASPELQQALHVQRLTEQTALKRF 900
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY +RQ R LSGI++S ++MEGT+L QK+LLHTSAQCQ QL KILDD+DLD II
Sbjct: 901 KELAYIRRQTRASLSGIMYSWRLMEGTDLRERQKQLLHTSAQCQHQLTKILDDTDLDCII 960
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DGYLDLEMVEFTL EVL ASISQV +KSN KGI I N E+ M TLYGD++RLQQV+A
Sbjct: 961 DGYLDLEMVEFTLYEVLSASISQVTLKSNGKGIHIANPLQEEKMPATLYGDNLRLQQVIA 1020
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
DFLSIS+NF PNGGQ++ S+SLTKD+LGQSV L ++E+R
Sbjct: 1021 DFLSISVNFTPNGGQIVASASLTKDRLGQSVQLVHVEIR 1059
>gi|190586161|gb|ACE79197.1| phytochrome A-3 [Glycine max]
Length = 1122
Score = 1769 bits (4581), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 851/1031 (82%), Positives = 947/1031 (91%), Gaps = 2/1031 (0%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQP 82
+AQ T+DAK+HA FE SG+SFDYS+SVRVS TA G QPRSD+VTTAYL+H+Q+GK+IQP
Sbjct: 22 MAQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNHMQRGKIIQP 81
Query: 83 FGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQ 142
FGCLLA+DEKT KVIAYSENAPE+LTMV+HAVPSVGDHP LGIG+DIKT+FTAPSASALQ
Sbjct: 82 FGCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQ 141
Query: 143 KALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 202
KALGF EV LLNP+L+HCKTSGKPFYAI+HRVTGS+IIDFEPVKPYEVPMTAAGALQSYK
Sbjct: 142 KALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 201
Query: 203 LAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLE 262
LAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV++EITK GLE
Sbjct: 202 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 261
Query: 263 PYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHS 322
PYLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HV+VLQDEKLPFDLTLCGSTLRAPHS
Sbjct: 262 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 321
Query: 323 CHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLR 380
CH QYM NM+SIASLVMAVVVND EE+GD PQKRKRLWGLVVCHNTTPRFVPFPLR
Sbjct: 322 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 381
Query: 381 YACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVK 440
YACEFLAQVFAIHVNKE+ELEYQI+EKNILRTQTLLCD++MRDAPLGIV++SPNIMDLVK
Sbjct: 382 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 441
Query: 441 CDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDV 500
CDGAAL+YKNK+WRLGVTP++ Q+ +I WLSEYHMDSTG S DSL DAG+ A +LGDV
Sbjct: 442 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSAPSLGDV 501
Query: 501 VCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTR 560
VCGMAAVR++ KD++FWFRS TA+E+RWGGAKHE EKDDGR+MHPRSSFK FL+VVK R
Sbjct: 502 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 561
Query: 561 SLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVR 620
SLPWK+YE+DA+HSLQLILRNAFKD ++DL+TK+I+++L DLKIEGM+ELEAVTSE+VR
Sbjct: 562 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 621
Query: 621 LIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLA 680
LIETATVPILAVDVDGLVNGWN KIAELTGL V +A+GKH LTLVEDSS D VK+ML LA
Sbjct: 622 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLA 681
Query: 681 LQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDK 740
L G+EE+N+QFEIKTHGSK++ PI+L+VNACASRDL DNVVGVCFVA DIT QK VMDK
Sbjct: 682 LLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDK 741
Query: 741 FTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFG 800
FTRIEGDYKAIVQN NPLIPPIFG+DEFGWCCEWNPAM KLTGWKREEV+DK+LL E+FG
Sbjct: 742 FTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELFG 801
Query: 801 TNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGA 860
T+MA CRLKNQEAFVNLG+VLNKAM+G + EKVPFGFFARNGKY ECLL V+KKLD EG
Sbjct: 802 THMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEGL 861
Query: 861 VTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGT 920
VTGVFCFLQLAS ELQQALH+QRLSEQTALKRL AL+Y KRQIRNPL GIIFSRKM+EGT
Sbjct: 862 VTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLEGT 921
Query: 921 ELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMK 980
LG EQK+LL TSAQCQ+QL KILDDSDLDSIIDGYLDLEM EFTL+EVLV S+SQVM K
Sbjct: 922 ALGTEQKQLLRTSAQCQQQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQVMTK 981
Query: 981 SNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQL 1040
SN K IRIVN+ AEQI+ ETLYGDS+RLQQVLADFL ISINF PNGGQ++V+ +LTK+QL
Sbjct: 982 SNGKSIRIVNDVAEQIVMETLYGDSLRLQQVLADFLLISINFTPNGGQVVVAGTLTKEQL 1041
Query: 1041 GQSVHLAYLEL 1051
G+SVHL LEL
Sbjct: 1042 GKSVHLVKLEL 1052
>gi|422898333|dbj|BAM67032.1| phytochrome a [Chrysanthemum seticuspe f. boreale]
Length = 1121
Score = 1756 bits (4549), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 813/1052 (77%), Positives = 940/1052 (89%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
M+SSRP +SS+N+ +S+HSAR+I QTT+DAKL ADFE SG SFDYS+SV VS+T QQ
Sbjct: 1 MASSRPTESSTNSARSKHSARIIQQTTVDAKLDADFEESGDSFDYSSSVHVSTTVIDGQQ 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIA+SENAPE+LTMV+H VP+VG++
Sbjct: 61 PRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHTVPTVGEN 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+D++TIF PSA+AL KALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLII
Sbjct: 121 PVLGIGTDVRTIFAGPSATALFKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPV P EVPMTAAGALQSYK AAKAI RLQSLPSGS+ERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVMPNEVPMTAAGALQSYKHAAKAIARLQSLPSGSIERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVV+EITK GL+PYLGLHYPATDIPQAARFLFMKNKVRMI DCRA++VKV
Sbjct: 241 AYKFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKNVKV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
+QD+KLPFDLTLCGS LRAPHSCHLQYM+NM SIASLVMAVV+ND +EEG + PQKRK+
Sbjct: 301 VQDKKLPFDLTLCGSNLRAPHSCHLQYMDNMTSIASLVMAVVINDMDEEGQTSEPQKRKK 360
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLR+ACEFLAQVFAIH+NKELELE QILEKNILRTQTLLCD+L
Sbjct: 361 LWGLVVCHNTTPRFVPFPLRFACEFLAQVFAIHINKELELENQILEKNILRTQTLLCDLL 420
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPNIMDLVKCDGAALLYKNK++R+GV+P D Q+HDIVSWL EYHMDSTG
Sbjct: 421 MRDAPLGIVSQSPNIMDLVKCDGAALLYKNKVYRMGVSPTDSQIHDIVSWLYEYHMDSTG 480
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSLYDAGY GALALGDVVCGMA+VR++ KD++FWFRS TASE+RWGGAKHE EKDD
Sbjct: 481 LSTDSLYDAGYPGALALGDVVCGMASVRLTEKDILFWFRSNTASEIRWGGAKHEKGEKDD 540
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
G++MHPRSSFKAFLEVV+ RS PWKD+EMDAIHSLQLI+RNA KD +L T I +
Sbjct: 541 GKRMHPRSSFKAFLEVVRMRSFPWKDFEMDAIHSLQLIMRNALKDNEVAELKTDVIQAGF 600
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
+LK++GM+ELEAVTSEMVRLIETA+VPILAVD DG VNGWNTKIAELTGL+V++AIG +
Sbjct: 601 NELKLDGMQELEAVTSEMVRLIETASVPILAVDADGSVNGWNTKIAELTGLTVEEAIGSN 660
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
LTLVEDSS++TV++ML LAL+G+EE +QFEIKT+GS+ PITL+VNACASRD+H+N
Sbjct: 661 LLTLVEDSSVETVQKMLNLALEGKEESGVQFEIKTYGSRRESGPITLVVNACASRDVHEN 720
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVK 780
VVGVC +AQDIT QKT+MDKFTRIEGDYKAIV NPNPLIPPIFG+DEFGWC EWN AM +
Sbjct: 721 VVGVCCIAQDITHQKTIMDKFTRIEGDYKAIVHNPNPLIPPIFGTDEFGWCSEWNQAMTE 780
Query: 781 LTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFAR 840
L+G RE+VIDK+LL EVFGT+ A CRL N+E+F+NL IVLNKAM+ ++ EK+ FGFFA+
Sbjct: 781 LSGLSREQVIDKMLLGEVFGTHAASCRLSNEESFINLSIVLNKAMTSEEAEKISFGFFAK 840
Query: 841 NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK 900
NGKY +C+LC +K++D EG VTG+FCFLQLAS +LQQA+H QR+SEQ A KRLKALAY +
Sbjct: 841 NGKYVDCMLCASKRVDSEGTVTGLFCFLQLASKDLQQAIHFQRMSEQIAAKRLKALAYVR 900
Query: 901 RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLE 960
RQI+NPLSGIIFSRKMMEGTELG EQK LLHTSA CQ+QL+K+LDD+DLDSI+DGYLDLE
Sbjct: 901 RQIKNPLSGIIFSRKMMEGTELGDEQKELLHTSALCQKQLNKVLDDTDLDSIVDGYLDLE 960
Query: 961 MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI 1020
M EFTL ++L AS+SQVM KSN GI+IVN AE ++ E LYGDS+RLQQVLADFLS+S+
Sbjct: 961 MTEFTLQQILGASVSQVMTKSNIMGIQIVNNVAEDMLLEKLYGDSVRLQQVLADFLSLSV 1020
Query: 1021 NFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+ P GG L ++++L KD + +SV L LELR
Sbjct: 1021 SCTPAGGVLAIAANLGKDLIAKSVQLVNLELR 1052
>gi|207367148|dbj|BAG72094.1| phytochrome A [Glycine max]
gi|371940222|dbj|BAL45548.1| Phytochrome A1 [Glycine max]
gi|371940224|dbj|BAL45549.1| Phytochrome A1 [Glycine soja]
gi|371940226|dbj|BAL45550.1| Phytochrome A1 [Glycine soja]
gi|371940228|dbj|BAL45551.1| Phytochrome A1 [Glycine soja]
gi|371940230|dbj|BAL45552.1| Phytochrome A1 [Glycine soja]
gi|371940232|dbj|BAL45553.1| Phytochrome A1 [Glycine soja]
gi|371940234|dbj|BAL45554.1| Phytochrome A1 [Glycine soja]
gi|371940236|dbj|BAL45555.1| Phytochrome A1 [Glycine soja]
gi|371940238|dbj|BAL45556.1| Phytochrome A1 [Glycine max]
gi|371940240|dbj|BAL45557.1| Phytochrome A1 [Glycine max]
gi|371940242|dbj|BAL45558.1| Phytochrome A1 [Glycine max]
Length = 1130
Score = 1756 bits (4548), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 839/1040 (80%), Positives = 937/1040 (90%), Gaps = 12/1040 (1%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQP 82
+AQ T+DAK+HA FE SG+SFDYS+SVRVS TA G QPRSD+VTTAYL+H+Q+GK+IQP
Sbjct: 22 MAQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNHMQRGKMIQP 81
Query: 83 FGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQ 142
FGCLLA+DEKT KVIAYSENAPE+LTMV+HAVPSVGDHP LGIG+DIKT+FTAPS S LQ
Sbjct: 82 FGCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVSGLQ 141
Query: 143 KALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 202
KALG +VSLLNPILVHCKTSGKPFYAIVHRVTGSLI+DFEPVKPYEVPMTAAGALQSYK
Sbjct: 142 KALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYK 201
Query: 203 LAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLE 262
LAAKAITRLQSLPSG+MERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV++EITK GLE
Sbjct: 202 LAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 261
Query: 263 PYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHS 322
PYLGLHYPATDIPQA+RFLF KNKVRMIVDC A+HV+VLQDEKL FDL LCGSTLRAPHS
Sbjct: 262 PYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHS 321
Query: 323 CHLQYMENMNSIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLR 380
CH QYM NM+SIASLV+AVVVND EE+GD PQKR+RLWGLVVCHNTTPRFVPFPLR
Sbjct: 322 CHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLR 381
Query: 381 YACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVK 440
YACEFLAQVFA+HV+KE+ELEYQI+EKNILRTQ LLC MLMRDAPLGIV++SPNIMDLVK
Sbjct: 382 YACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVK 440
Query: 441 CDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDV 500
CDGAAL+Y+NK+WRLGVTP++ Q+ +I WLSEYHMDSTG S DSL+DAG+ AL+LGDV
Sbjct: 441 CDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDV 500
Query: 501 VCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTR 560
VCGMA+VR++ KDM+FWFRS TA+E+RWGGAKHE EKDD R+MHPRSSFKAFLEVVK R
Sbjct: 501 VCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKAR 560
Query: 561 SLPWKDYEMDAIHSLQLILRNAFK-DVGTLDLDTKSIHSKLCDLKIEG--------MKEL 611
SLPWK+YEMDAIHSLQ+ILRNAFK D +LDL+ K+I+++L DLKIEG M+EL
Sbjct: 561 SLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLSDLKIEGINDLKIERMQEL 620
Query: 612 EAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSID 671
EAVTSE+VRLI+TATVPILAVDVDGLVNGWN KIAELTGL + +A GKH LTLVEDSS D
Sbjct: 621 EAVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVEDSSTD 680
Query: 672 TVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDI 731
VK+ML LAL G+EE+N+QFEIKTHGSK++ PI+L+VNACASRDL DNVVGVCFVA DI
Sbjct: 681 RVKKMLNLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDI 740
Query: 732 TPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVID 791
T QK VMDKF RIEGDYKAIVQN NPLIPPIFG+DEFGWCCEWNPAM+KLTGWKREEV+D
Sbjct: 741 TAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREEVMD 800
Query: 792 KLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCV 851
K+LL E+FGT MA CRLKNQEAFVNLG+VLNKAM+G + EKVPFGFFARNGKY ECLL V
Sbjct: 801 KMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECLLSV 860
Query: 852 NKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGII 911
+KKLD EG VTGVFCFLQLAS ELQQALH+QRLSEQTA KRL AL+Y KRQIRNPL GI+
Sbjct: 861 SKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLCGIV 920
Query: 912 FSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLV 971
FSRKM+EGT+LG EQK+LL TSAQCQ+QL KILDDSDLD+IIDGYLDLEM EFTL+EVLV
Sbjct: 921 FSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGYLDLEMAEFTLHEVLV 980
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
S+SQVM KSN K IRIVN+ A IM ETLYGDS+RLQQVLADFL ISINF PNGGQ++V
Sbjct: 981 TSLSQVMTKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQVLADFLLISINFTPNGGQVVV 1040
Query: 1032 SSSLTKDQLGQSVHLAYLEL 1051
+ SLTK+QLG+SVHL LEL
Sbjct: 1041 AGSLTKEQLGKSVHLVKLEL 1060
>gi|258677125|gb|ACV87353.1| phytochrome A [Aquilegia formosa]
Length = 1130
Score = 1754 bits (4544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 816/1056 (77%), Positives = 942/1056 (89%), Gaps = 6/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS+SRP Q ++++ +S+HSARVIAQTT+DAKLHA+FE +G+SFDYS SV V++++ +QQ
Sbjct: 1 MSNSRPNQVATSSSRSKHSARVIAQTTVDAKLHAEFEETGSSFDYSRSVSVTNSS--NQQ 58
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
RSD+VTTAYLH IQKGK IQPFGCLLALDEKT KVIAYSENAPE+LTMV+HAVPSVG+H
Sbjct: 59 TRSDKVTTAYLHQIQKGKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGEH 118
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+D+KTI T+PSASALQKAL F +V+LLNPILVHCK+SGKPFYAIVHRVTGSLII
Sbjct: 119 PVLGIGTDLKTILTSPSASALQKALAFSDVTLLNPILVHCKSSGKPFYAIVHRVTGSLII 178
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAI RLQSLPSGS++RLCDT+++EVF+LTGYDRVM
Sbjct: 179 DFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSIDRLCDTVVEEVFQLTGYDRVM 238
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
YKFH+DDHGEVVSE TK GL PYLGLHYPATDIPQAARFLFMKNK+RMI DCRA+HV+V
Sbjct: 239 VYKFHDDDHGEVVSETTKEGLPPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRV 298
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVND-EEEEG---DNTLPQ 356
LQDEKLPF+LTLCGSTLRAPHSCHLQYMENM+SIASLVMAVV+ND +EEEG + Q
Sbjct: 299 LQDEKLPFELTLCGSTLRAPHSCHLQYMENMDSIASLVMAVVINDGDEEEGTVEGASQSQ 358
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFL QVFAIHVNKE ELE QILEKNILRTQTLL
Sbjct: 359 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLIQVFAIHVNKEFELENQILEKNILRTQTLL 418
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMR+AP+GIV+QSPNIMDLVKCDGAALLY+NKIWRLG++P++ + DI SWLSEYHM
Sbjct: 419 CDMLMRNAPIGIVSQSPNIMDLVKCDGAALLYQNKIWRLGLSPSESHIRDIASWLSEYHM 478
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSLYDAG+ GAL++GD VCGMAAVRI+ KDM+FWFRS TA E+RWGGAKHEP
Sbjct: 479 DSTGLSTDSLYDAGFPGALSIGDTVCGMAAVRINSKDMLFWFRSHTAGEIRWGGAKHEPG 538
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
EKDDGRKMHPRSSFKAFLEVVKTRS PWKD+EMDAIHSLQLILRN FKD+ T D +T I
Sbjct: 539 EKDDGRKMHPRSSFKAFLEVVKTRSFPWKDFEMDAIHSLQLILRNTFKDIETADGNTNVI 598
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HS+L LKI+GM+ELEAVT+EMVRLIETATVPILAVD++GL+NGWNTKIAELTGL VD+
Sbjct: 599 HSQLDKLKIDGMEELEAVTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDQV 658
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFL LVE+SS +TVKRML+LAL G+EEQN+ FE+KTHGSK + P++L+VNACASRD
Sbjct: 659 IGKHFLKLVEESSAETVKRMLHLALLGKEEQNVHFEMKTHGSKKDSGPVSLVVNACASRD 718
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
L +NVVGVCFVA D+T QK VMDKFTRIEGDYKAI+QNP+PL PPIFG+DEFGWCCEWNP
Sbjct: 719 LQENVVGVCFVAHDLTNQKMVMDKFTRIEGDYKAILQNPSPLYPPIFGTDEFGWCCEWNP 778
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KL+GW R EV+DK+LL E+FGTNM+CCRLKNQE FVNLGIVLN AM G++ +KV FG
Sbjct: 779 AMTKLSGWDRAEVMDKMLLGEIFGTNMSCCRLKNQETFVNLGIVLNGAMMGEETDKVSFG 838
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF RNG Y +CLL V KK+D EG VTGVFCFL S ELQQALHVQRLSEQ+AL++ K L
Sbjct: 839 FFGRNGNYVDCLLSVTKKVDGEGVVTGVFCFLHTVSQELQQALHVQRLSEQSALQKSKGL 898
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
Y KRQIRNPLSGIIFS KMM GT+L EQK+LLHTS CQRQLHK+L+D+DL+ I+DGY
Sbjct: 899 TYMKRQIRNPLSGIIFSGKMMGGTDLDEEQKQLLHTSMHCQRQLHKVLEDTDLERIMDGY 958
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
+D +M+EFTL EVL+ ISQV ++S+ + +R N++ E M+ETLYGDS+RLQQVLADF+
Sbjct: 959 VDSKMIEFTLREVLITCISQVKIESDRRSLRFTNDSLEDFMTETLYGDSLRLQQVLADFM 1018
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+S+ F P GGQ+ +S+SLT+++LG+SVHLA+LELR
Sbjct: 1019 LVSVKFTPKGGQIGISASLTRNRLGESVHLAHLELR 1054
>gi|371940220|dbj|BAL45547.1| Phytochrome A1 [Glycine max]
Length = 1130
Score = 1753 bits (4541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 838/1040 (80%), Positives = 936/1040 (90%), Gaps = 12/1040 (1%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQP 82
+AQ T+DAK+HA FE SG+SFDYS+SVRVS TA G QPRSD+VTTAYL+H+Q+GK+IQP
Sbjct: 22 MAQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNHMQRGKMIQP 81
Query: 83 FGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQ 142
FGCLLA+DEKT KVIAYSENAPE+LTMV+HAVPSVGDHP LGIG+DIKT+FTAPS S LQ
Sbjct: 82 FGCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVSGLQ 141
Query: 143 KALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 202
KALG +VSLLNPILVHCKTSGKPFYAIVHRVTGSLI+DFEPVKPYEVPMTAAGALQSYK
Sbjct: 142 KALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYK 201
Query: 203 LAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLE 262
LAAKAITRLQSLPSG+MERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV++EITK GLE
Sbjct: 202 LAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 261
Query: 263 PYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHS 322
PYLGLHYPATDIPQA+RFLF KNKVRMIVDC A+HV+VLQDEKL FDL LCGSTLRAPHS
Sbjct: 262 PYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHS 321
Query: 323 CHLQYMENMNSIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLR 380
CH QYM NM+SIASLV+AVVVND EE+GD PQKR+RLWGLVVCHNTTPRFVPFPLR
Sbjct: 322 CHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLR 381
Query: 381 YACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVK 440
YACEFLAQVFA+HV+KE+ELEYQI+EKNILRTQ LLC MLMRDAPLGIV++SPNIMDLVK
Sbjct: 382 YACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVK 440
Query: 441 CDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDV 500
CDGAAL+Y+NK+WRLGVTP++ Q+ +I WLSEYHMDSTG S DSL+DAG+ AL+LGDV
Sbjct: 441 CDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDV 500
Query: 501 VCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTR 560
VCGMA+VR++ K M+FWFRS TA+E+RWGGAKHE EKDD R+MHPRSSFKAFLEVVK R
Sbjct: 501 VCGMASVRVTAKGMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKAR 560
Query: 561 SLPWKDYEMDAIHSLQLILRNAFK-DVGTLDLDTKSIHSKLCDLKIEG--------MKEL 611
SLPWK+YEMDAIHSLQ+ILRNAFK D +LDL+ K+I+++L DLKIEG M+EL
Sbjct: 561 SLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLSDLKIEGINDLKIERMQEL 620
Query: 612 EAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSID 671
EAVTSE+VRLI+TATVPILAVDVDGLVNGWN KIAELTGL + +A GKH LTLVEDSS D
Sbjct: 621 EAVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVEDSSTD 680
Query: 672 TVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDI 731
VK+ML LAL G+EE+N+QFEIKTHGSK++ PI+L+VNACASRDL DNVVGVCFVA DI
Sbjct: 681 RVKKMLNLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDI 740
Query: 732 TPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVID 791
T QK VMDKF RIEGDYKAIVQN NPLIPPIFG+DEFGWCCEWNPAM+KLTGWKREEV+D
Sbjct: 741 TAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREEVMD 800
Query: 792 KLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCV 851
K+LL E+FGT MA CRLKNQEAFVNLG+VLNKAM+G + EKVPFGFFARNGKY ECLL V
Sbjct: 801 KMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECLLSV 860
Query: 852 NKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGII 911
+KKLD EG VTGVFCFLQLAS ELQQALH+QRLSEQTA KRL AL+Y KRQIRNPL GI+
Sbjct: 861 SKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLCGIV 920
Query: 912 FSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLV 971
FSRKM+EGT+LG EQK+LL TSAQCQ+QL KILDDSDLD+IIDGYLDLEM EFTL+EVLV
Sbjct: 921 FSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGYLDLEMAEFTLHEVLV 980
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
S+SQVM KSN K IRIVN+ A IM ETLYGDS+RLQQVLADFL ISINF PNGGQ++V
Sbjct: 981 TSLSQVMTKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQVLADFLLISINFTPNGGQVVV 1040
Query: 1032 SSSLTKDQLGQSVHLAYLEL 1051
+ SLTK+QLG+SVHL LEL
Sbjct: 1041 AGSLTKEQLGKSVHLVKLEL 1060
>gi|371941942|gb|ACE79196.2| phytochrome A-2 [Glycine max]
Length = 1130
Score = 1753 bits (4539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 838/1040 (80%), Positives = 936/1040 (90%), Gaps = 12/1040 (1%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQP 82
+AQ T+DAK+HA FE SG+SFDYS+SVRVS TA G QPRSD+VTTAYL+ +Q+GK+IQP
Sbjct: 22 MAQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNRMQRGKMIQP 81
Query: 83 FGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQ 142
FGCLLA+DEKT KVIAYSENAPE+LTMV+HAVPSVGDHP LGIG+DIKT+FTAPS S LQ
Sbjct: 82 FGCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVSGLQ 141
Query: 143 KALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 202
KALG +VSLLNPILVHCKTSGKPFYAIVHRVTGSLI+DFEPVKPYEVPMTAAGALQSYK
Sbjct: 142 KALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYK 201
Query: 203 LAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLE 262
LAAKAITRLQSLPSG+MERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV++EITK GLE
Sbjct: 202 LAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 261
Query: 263 PYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHS 322
PYLGLHYPATDIPQA+RFLF KNKVRMIVDC A+HV+VLQDEKL FDL LCGSTLRAPHS
Sbjct: 262 PYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHS 321
Query: 323 CHLQYMENMNSIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLR 380
CH QYM NM+SIASLV+AVVVND EE+GD PQKR+RLWGLVVCHNTTPRFVPFPLR
Sbjct: 322 CHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLR 381
Query: 381 YACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVK 440
YACEFLAQVFA+HV+KE+ELEYQI+EKNILRTQ LLC MLMRDAPLGIV++SPNIMDLVK
Sbjct: 382 YACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVK 440
Query: 441 CDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDV 500
CDGAAL+Y+NK+WRLGVTP++ Q+ +I WLSEYHMDSTG S DSL+DAG+ AL+LGDV
Sbjct: 441 CDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDV 500
Query: 501 VCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTR 560
VCGMA+VR++ KDM+FWFRS TA+E+RWGGAKHE EKDD R+MHPRSSFKAFLEVVK R
Sbjct: 501 VCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKAR 560
Query: 561 SLPWKDYEMDAIHSLQLILRNAFK-DVGTLDLDTKSIHSKLCDLKIEG--------MKEL 611
SLPWK+YEMDAIHSLQ+ILRNAFK D +LDL+ K+I+++L DLKIEG M+EL
Sbjct: 561 SLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLSDLKIEGINDLKIERMQEL 620
Query: 612 EAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSID 671
EAVTSE+VRLI+TATVPILAVDVDGLVNGWN KIAELTGL + +A GKH LTLVEDSS D
Sbjct: 621 EAVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVEDSSTD 680
Query: 672 TVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDI 731
VK+ML LAL G+EE+N+QFEIKTHGSK++ PI+L+VNACASRDL DNVVGVCFVA DI
Sbjct: 681 RVKKMLNLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDI 740
Query: 732 TPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVID 791
T QK VMDKF RIEGDYKAIVQN NPLIPPIFG+DEFGWCCEWNPAM+KLTGWKREEV+D
Sbjct: 741 TAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKREEVMD 800
Query: 792 KLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCV 851
K+LL E+FGT MA CRLKNQEAFVNLG+VLNKAM+G + EKVPFGFFARNGKY ECLL V
Sbjct: 801 KMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVECLLSV 860
Query: 852 NKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGII 911
+KKLD EG VTGVFCFLQLAS ELQQALH+QRLSEQTA KRL AL+Y KRQIRNPL GI+
Sbjct: 861 SKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPLCGIV 920
Query: 912 FSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLV 971
FSRKM+EGT+LG EQK+LL TSAQCQ+QL KILDDSDLD+IIDGYLDLEM EFTL+EVLV
Sbjct: 921 FSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGYLDLEMAEFTLHEVLV 980
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
S+SQVM KSN K IRIVN+ A IM ETLYGDS+RLQQVLADFL ISINF PNGGQ++V
Sbjct: 981 TSLSQVMTKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQVLADFLLISINFTPNGGQVVV 1040
Query: 1032 SSSLTKDQLGQSVHLAYLEL 1051
+ SLTK+QLG+SVHL LEL
Sbjct: 1041 AGSLTKEQLGKSVHLVKLEL 1060
>gi|261865351|gb|ACY01932.1| phytochrome A [Beta vulgaris]
Length = 1125
Score = 1752 bits (4537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 830/1056 (78%), Positives = 939/1056 (88%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVR-VSSTAGGDQ 59
MSSS P+Q S+N+G+S+HS R++AQT +DAKLHADFE S + FDYS+SVR +S++ G Q
Sbjct: 1 MSSSTPSQGSNNSGRSKHSVRIMAQTIVDAKLHADFEESSSEFDYSSSVRATTSSSAGKQ 60
Query: 60 QPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD 119
P+SD+VT++YL IQKGKLIQPFGCLLALDEKTF+V+AYS+NAPE+LTMV+HAVPSVGD
Sbjct: 61 PPKSDKVTSSYLLQIQKGKLIQPFGCLLALDEKTFRVVAYSDNAPEMLTMVSHAVPSVGD 120
Query: 120 HPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
HPV+GIG+D++TIFTAPSASALQKALGF +VSLLNPILVHCKTSGKPFYAI+HRVTGSL+
Sbjct: 121 HPVIGIGTDVRTIFTAPSASALQKALGFADVSLLNPILVHCKTSGKPFYAIIHRVTGSLV 180
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSG++ RL DTM+QEV+ELTGYDRV
Sbjct: 181 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNISRLVDTMVQEVYELTGYDRV 240
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
MAYKFH+DDHGEV+SEITK LEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA++V+
Sbjct: 241 MAYKFHDDDHGEVISEITKPDLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKYVQ 300
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP---Q 356
V+QDEKLPFDLTLCGSTLRAPH CH QYMENMNSI SLVMAVVVNDE+E+ + + P Q
Sbjct: 301 VIQDEKLPFDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDEDDNASAPPQSQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELE Q LEK ILRTQTLL
Sbjct: 361 KRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRD PLGIVTQSPNIMDLVKCDGA LLY + IW++GVTP D+Q+ DI WLS H
Sbjct: 421 CDMLMRDVPLGIVTQSPNIMDLVKCDGAVLLYNSNIWKIGVTPTDYQIRDIAVWLSLDHQ 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSLYDAGY GALALGD VCGMAAVRI+ KDM+FWFRS TA+EV+WGGAKH+P
Sbjct: 481 DSTGLSTDSLYDAGYPGALALGDTVCGMAAVRITLKDMLFWFRSHTAAEVKWGGAKHQPG 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
EKDDG KMHPRSSFKAFLEVVK RS+PWKD+EMDAIHSLQLILRNAFKD DL+T I
Sbjct: 541 EKDDGAKMHPRSSFKAFLEVVKNRSVPWKDFEMDAIHSLQLILRNAFKDKEAADLNTSVI 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSK+ DLKI+G +ELEAVT EMVRLIETATVPI AVD DGLVNGWNTKI+ELTGL V +A
Sbjct: 601 HSKISDLKIDGYRELEAVTGEMVRLIETATVPIFAVDADGLVNGWNTKISELTGLPVTEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
+GKH LVED SIDTV+ +L LALQG+EE+++QFEIK H S ++ PI+L+VNACAS+D
Sbjct: 661 VGKHIAALVEDCSIDTVRNLLQLALQGKEEKDVQFEIKRHQSMVDTGPISLVVNACASKD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
++ NV+GVCF+AQDIT QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 VNGNVIGVCFIAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG+KREEV+DK+LL EVFGT+ +CCRLKNQEAFVNLG+VLN AMSGQD EKVP G
Sbjct: 781 AMSKLTGYKREEVMDKMLLGEVFGTHKSCCRLKNQEAFVNLGVVLNGAMSGQDTEKVPIG 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCVNKKLDREGAVTGVFCFLQLAS +LQ ALHVQRL+EQ A KRLKAL
Sbjct: 841 FFTRTGKYIECLLCVNKKLDREGAVTGVFCFLQLASQDLQHALHVQRLAEQAASKRLKAL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPL GI+FSRK++EGT+LG EQ+ LLHTSAQCQRQL+KILDDSDLD IIDGY
Sbjct: 901 AYMKRQIRNPLCGIMFSRKLLEGTDLGEEQRLLLHTSAQCQRQLNKILDDSDLDCIIDGY 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
L+LEMVEF++ +VLVASISQVM KSN KGIRI +E E+ M ETLYGDS+RLQQ+LADFL
Sbjct: 961 LELEMVEFSMQDVLVASISQVMTKSNEKGIRIKSECGEECMRETLYGDSVRLQQILADFL 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
IS+N P GG + ++ L KD++G+SV L LE R
Sbjct: 1021 LISVNCTPAGGDVGITVRLIKDKIGESVQLGNLEFR 1056
>gi|327342186|gb|AEA50880.1| phyA [Populus tremula]
Length = 958
Score = 1735 bits (4494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 829/941 (88%), Positives = 885/941 (94%), Gaps = 3/941 (0%)
Query: 18 HSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKG 77
HSAR+IAQTT+DAKLHADFE SG+SFDYS+SVRV+ + GGDQ PRSD+VTTAYLHHIQKG
Sbjct: 18 HSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKG 77
Query: 78 KLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPS 137
KLIQPFGCLLALDEKTF+V+AYSENAPELLTMV+HAVPSVG+HPVLGIG+DI+TIFTAPS
Sbjct: 78 KLIQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPS 137
Query: 138 ASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197
ASALQKA+GFG+VSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA
Sbjct: 138 ASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197
Query: 198 LQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEIT 257
LQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDR MAYKFH+DDHGEVVSE+T
Sbjct: 198 LQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVT 257
Query: 258 KSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTL 317
K G+EPYLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HVKVLQDEKLPFDLTLCGSTL
Sbjct: 258 KPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTL 317
Query: 318 RAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQKRKRLWGLVVCHNTTPRF 374
RAPHSCHLQYMENMNSIASLVMAVVVND +E+GD + PQKRKRLWGLVVCHNT+PRF
Sbjct: 318 RAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRF 377
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPN 434
VPFPLRYACEFLAQVFAIHVNKELELE QI+EKNILRTQTLLCDMLMRDAPLGIVTQSPN
Sbjct: 378 VPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPN 437
Query: 435 IMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGA 494
IMDLVKCDGA L Y+NKIWRLG+TP+D QL DI WLSEYHMDSTGLS DSLYDAGY GA
Sbjct: 438 IMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGA 497
Query: 495 LALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFL 554
LALGDVVCGMAAVRI+ KDM+FWFRSQTA+E+RWGGAKHEP EKDDGR+MHPRSSFKAFL
Sbjct: 498 LALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFL 557
Query: 555 EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAV 614
EVVKTRSLPWKDYEMDAIHSLQLILRN FKD+ T+D+DTK+IH++L DLKIEGM+ELEAV
Sbjct: 558 EVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAV 617
Query: 615 TSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVK 674
TSEMVRLIETATVPILAVDVDGLVNGWNTKI+ELTGL VDKAIGKH LTLVEDSS+D VK
Sbjct: 618 TSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVK 677
Query: 675 RMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQ 734
RML+LALQG+EEQNIQFEIKTHGSK PI L+VNACASRDLH+NVVGVCFV QDIT Q
Sbjct: 678 RMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQ 737
Query: 735 KTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLL 794
K VMDKFTRIEGDYKAIVQN NPLIPPIFG+DEFGWC EWNPAM LTGWKREEV+DK+L
Sbjct: 738 KMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKML 797
Query: 795 LAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKK 854
L EVFG NMACCRLKNQEAFVNLG+VLN AM+GQ+ EKV FGFFAR GKY ECLLCV+KK
Sbjct: 798 LGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKK 857
Query: 855 LDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSR 914
LDREGAVTGVFCFLQLAS ELQQALHVQRLSEQTALKRLKALAY K+QI NPLSGIIFS
Sbjct: 858 LDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIFSG 917
Query: 915 KMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG 955
KMMEGTELGAEQK LLHTSAQCQ QL KILDDSDLDSII+G
Sbjct: 918 KMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEG 958
>gi|38037178|gb|AAR08425.1| phytochrome A [Cuscuta pentagona]
Length = 1119
Score = 1715 bits (4442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 813/1040 (78%), Positives = 929/1040 (89%), Gaps = 10/1040 (0%)
Query: 17 RHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
+HSAR+IAQT+IDAKLHA+FE SG SFDYS+S+RV+S G+Q+PRSD+VTTAYLH IQK
Sbjct: 17 KHSARIIAQTSIDAKLHAEFEESGDSFDYSSSIRVTSVNTGEQKPRSDKVTTAYLHQIQK 76
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAP 136
K IQPFGCLLALDEKTF+VIA+SENAP++LTMV+HAVPSVGD PVLGIG+DI+TIFTAP
Sbjct: 77 AKFIQPFGCLLALDEKTFRVIAFSENAPDMLTMVSHAVPSVGDLPVLGIGTDIRTIFTAP 136
Query: 137 SASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
S +ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI+DFEPVKPYE PMTAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEAPMTAAG 196
Query: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEI 256
ALQSYKLAAKAI RLQSLPSGS+ER CDT++QEVFELTGYDRVMAYKFH+DDHGEVVSEI
Sbjct: 197 ALQSYKLAAKAIARLQSLPSGSLERFCDTIVQEVFELTGYDRVMAYKFHDDDHGEVVSEI 256
Query: 257 TKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGST 316
TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC+A+HVKV+QDEKL FDLTLCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCQAKHVKVVQDEKLLFDLTLCGST 316
Query: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ--KRKRLWGLVVCHNTTPRF 374
LRAPH+CHLQYMENMNSIASLVMA+VVND ++E + KRKRLWGLVVCHNTTPRF
Sbjct: 317 LRAPHTCHLQYMENMNSIASLVMAIVVNDGDDEEEEERSGSGKRKRLWGLVVCHNTTPRF 376
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQS-- 432
VPFPLRYACEFLAQVFAIHVNKELELE QI+EKNILRTQTLLCD+L+RDA LGIV+QS
Sbjct: 377 VPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDILLRDAVLGIVSQSQS 436
Query: 433 PNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYL 492
PN+MDLVKCDGA LLYK+KI RLG+TP DFQL DIV L+E+HMDSTGLS DSLYDAG+
Sbjct: 437 PNMMDLVKCDGAVLLYKSKIHRLGITPTDFQLQDIVYRLNEHHMDSTGLSTDSLYDAGFP 496
Query: 493 GALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKA 552
GAL+LG +CGMA+VRIS KD +FWFRS TASEVRWGG KHEPD DGRKMHPRSSFKA
Sbjct: 497 GALSLG--LCGMASVRISEKDWLFWFRSHTASEVRWGGVKHEPD---DGRKMHPRSSFKA 551
Query: 553 FLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELE 612
FLEVV+TRSLPWKDYEMD IHSLQLI+RNAF + + T IH+KL DL+I+G++ELE
Sbjct: 552 FLEVVETRSLPWKDYEMDGIHSLQLIMRNAFFNEAD-TVATNVIHAKLNDLRIDGLQELE 610
Query: 613 AVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDT 672
AVTSEMVRLIETA VPI+AV VDGLVNGWNTKIAELTGLSVD+AIG H LTLVEDSS+ T
Sbjct: 611 AVTSEMVRLIETAMVPIIAVGVDGLVNGWNTKIAELTGLSVDEAIGNHLLTLVEDSSVHT 670
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
VK+ML LALQG+EE+N+QFEI THG + PI+L+VNACASRD+ ++VVGVCF+AQDIT
Sbjct: 671 VKKMLNLALQGEEEKNVQFEIMTHGIRSECGPISLVVNACASRDVQESVVGVCFIAQDIT 730
Query: 733 PQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDK 792
QKTVMDKFTRIEGDY+AI+QNPNPLIPPIFG+DEFGWC EWN AM KL+GW+R+EVIDK
Sbjct: 731 GQKTVMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEWNSAMTKLSGWRRDEVIDK 790
Query: 793 LLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVN 852
++L EVFGT ACCRLK+ EAFV LG+VLN A++G + +K FGF RNGKY ECLL V
Sbjct: 791 MVLGEVFGTQKACCRLKSHEAFVTLGVVLNNAITGHESDKTVFGFCTRNGKYVECLLSVT 850
Query: 853 KKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K+L+++GAV G+FCFLQLAS ELQQALH Q+LSEQTA KRLK LAY ++Q++NPLSGI+F
Sbjct: 851 KRLNQDGAVIGLFCFLQLASQELQQALHFQKLSEQTATKRLKVLAYLRKQVKNPLSGIMF 910
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVA 972
SRKM+EGTELG +Q+ +LHTSAQCQ+QL K+LDD+DLD II+GYLDLEMVEF L+EVL+A
Sbjct: 911 SRKMLEGTELGNDQQNILHTSAQCQQQLSKVLDDTDLDCIIEGYLDLEMVEFKLDEVLLA 970
Query: 973 SISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVS 1032
SISQVM KSN K +R++N+ AE ++ ETLYGDS+RLQQVLA+FLS+++NF P+GGQL VS
Sbjct: 971 SISQVMTKSNGKSLRVINDVAENVLCETLYGDSLRLQQVLAEFLSVAVNFTPSGGQLAVS 1030
Query: 1033 SSLTKDQLGQSVHLAYLELR 1052
SSLTKD LGQSV LA+LE R
Sbjct: 1031 SSLTKDHLGQSVQLAHLEFR 1050
>gi|38037208|gb|AAR08426.1| phytochrome A [Orobanche minor]
Length = 1123
Score = 1715 bits (4441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 799/1054 (75%), Positives = 934/1054 (88%), Gaps = 2/1054 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
M+SS+P +SS+N+ +SR SAR+IAQT+IDAKL ADFE SG+SFDYS SVRV++ G +
Sbjct: 1 MASSQPGRSSTNSAQSRQSARIIAQTSIDAKLDADFEESGSSFDYSTSVRVTNYPAGLSE 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTTAYLH IQKGKLIQ FGCLLALDEKTF+VIAYSENAPE+LTMV+HAVPSVGDH
Sbjct: 61 PRSDKVTTAYLHQIQKGKLIQQFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
P+LGIGSDI+TIFTAPSA+ALQKALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLII
Sbjct: 121 PLLGIGSDIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKP+EVPMTAAGALQSYKLAAKAI LQ+LP GS+ERLCDTM+Q+VFELTGYDRVM
Sbjct: 181 DFEPVKPHEVPMTAAGALQSYKLAAKAIACLQALPGGSIERLCDTMVQQVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
YKFHEDDHGEV +EITK GLEPY+GLHYPATDIPQAARFLFMKNKVRMI DCRA HVKV
Sbjct: 241 IYKFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKR 358
+QD+ LPFDLTLCGSTLRAPH CH QYMENMNSIASLVM+VVVN+ +E+G ++ P KR
Sbjct: 301 VQDDNLPFDLTLCGSTLRAPHGCHSQYMENMNSIASLVMSVVVNEGDEDGPDSSSGPYKR 360
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNT PRF+PFPLRYACEFL QVF+IHVNKELELE Q+LEKNILRTQTLLCD
Sbjct: 361 KRLWGLVVCHNTCPRFIPFPLRYACEFLVQVFSIHVNKELELENQMLEKNILRTQTLLCD 420
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
+L+RD PLGIV+QSPN+MDLVKCDGA LL+K +RLG+TP DFQ+ DIVSWL EYH DS
Sbjct: 421 LLLRDVPLGIVSQSPNVMDLVKCDGAILLHKRTKYRLGLTPTDFQIRDIVSWLDEYHQDS 480
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSLYDAG+ GALALG+ +CGMAAV+I+ +D +FWFRS TA+E+RWGGAKHE + K
Sbjct: 481 TGLSTDSLYDAGFPGALALGNALCGMAAVKITDEDWLFWFRSHTAAEIRWGGAKHELEAK 540
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DDGRKMHPRSSF+AFLEVVKTRSLPWKDYEMD IHSLQLILRNA+K+ DL+++ IH+
Sbjct: 541 DDGRKMHPRSSFRAFLEVVKTRSLPWKDYEMDGIHSLQLILRNAYKESEEKDLESREIHA 600
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
+L +L+I+G+KE+EAVTSEMVRLIETATVPI +V VDGLVNGWNTKI++LTGLSV +AIG
Sbjct: 601 RLNELQIDGVKEIEAVTSEMVRLIETATVPIFSVGVDGLVNGWNTKISDLTGLSVVEAIG 660
Query: 659 KHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLH 718
HFL LVEDSS DTV +ML LALQG+EE ++QFEIKTHG + PI+LIVNACAS+D+
Sbjct: 661 MHFLALVEDSSADTVSKMLGLALQGKEEHDVQFEIKTHGQRSESGPISLIVNACASKDVK 720
Query: 719 DNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAM 778
+NVVGVCF+AQDIT QK++MDKFTRIEGDY++I+QNPNPLIPPIFG+DEFGWC EWN AM
Sbjct: 721 ENVVGVCFIAQDITTQKSMMDKFTRIEGDYRSIIQNPNPLIPPIFGTDEFGWCSEWNAAM 780
Query: 779 VKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFF 838
+KL+GW RE VIDK+LL EVFG N ACCRLKNQEA+VNLG+VLN ++GQ+ KV FGFF
Sbjct: 781 IKLSGWGREAVIDKMLLGEVFGLNKACCRLKNQEAYVNLGVVLNNTVTGQESGKVSFGFF 840
Query: 839 ARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAY 898
+R+GKY CLLCV+KK+D EG+VTG+FCFLQLAS ELQQALH+QR+SEQTA KRL+ LAY
Sbjct: 841 SRSGKYVACLLCVSKKVDSEGSVTGLFCFLQLASPELQQALHIQRISEQTASKRLRVLAY 900
Query: 899 TKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLD 958
+R+IR+PLSGIIFSRK+MEGT+L EQK ++ TS CQ Q++KIL+D+DLD II+GYLD
Sbjct: 901 IRREIRSPLSGIIFSRKLMEGTDLNDEQKNIVRTSLHCQSQMNKILEDTDLDHIIEGYLD 960
Query: 959 LEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSI 1018
LEMVEF L+EVL+ASISQV+ KSN KGI+IV+ A + +ETLYGDS+RLQQVLA FL I
Sbjct: 961 LEMVEFKLHEVLIASISQVISKSNGKGIKIVDNLAPNLSNETLYGDSLRLQQVLAAFLLI 1020
Query: 1019 SINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+++ P+GGQL V+++L KD +G+ V L LE R
Sbjct: 1021 AVDSTPSGGQLGVAATLAKDSIGEFVQLGRLECR 1054
>gi|351722971|ref|NP_001238286.1| phytochrome A [Glycine max]
gi|1172495|sp|P42500.1|PHYA_SOYBN RecName: Full=Phytochrome A
gi|515749|gb|AAA33957.1| phytochrome A [Glycine max]
gi|515751|gb|AAA33999.1| phytochrome A [Glycine max]
Length = 1131
Score = 1689 bits (4375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 822/1044 (78%), Positives = 915/1044 (87%), Gaps = 19/1044 (1%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQP 82
+AQ T+DAK+HA FE SG+SFDYS+SVRVS TA G QPRSD+VTTAYL +GK+IQP
Sbjct: 22 MAQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYL----RGKMIQP 77
Query: 83 FGCLLALDEK----TFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSA 138
FGCLLA+DEK T KVIAYSEN PE+LTMV+HAVPSVGDHP LGIG+DIKT+FTAPS
Sbjct: 78 FGCLLAIDEKNHMQTCKVIAYSENEPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSV 137
Query: 139 SALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGAL 198
S LQKALG +VSLLNPILVHCKTSGKPFYAIVHRVTGSLI+DFEPVKPYEVPMTAAGAL
Sbjct: 138 SGLQKALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGAL 197
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSG+MERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV+ EITK
Sbjct: 198 QSYKLAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIREITK 257
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
LEPYLGLHYPATDIPQA+RFLF KNKVRMIVDC A+HV+VLQDEKL FDL LCGSTLR
Sbjct: 258 PCLEPYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLR 317
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVP 376
APHSCH QYM NM+SIASLV+AVVVND EE+GD PQK +RLWGLVVCHNTTPRFVP
Sbjct: 318 APHSCHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKTERLWGLVVCHNTTPRFVP 377
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 436
FPLRYA EFL QVFA HV+KE+ELEYQI+EKNIL L MLMRDAPLGI ++SPNIM
Sbjct: 378 FPLRYAREFLPQVFADHVHKEIELEYQIIEKNILHHPGHLLCMLMRDAPLGIASESPNIM 437
Query: 437 DLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALA 496
DLVKCDGAAL+Y+NK+WRLGVTP++ Q+ +I WLSEYHMDST S DSL+DAG+ AL+
Sbjct: 438 DLVKCDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTSFSTDSLFDAGFPSALS 497
Query: 497 LGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEV 556
LGDVVCGMA+VR++ KDM+FWFRS TA+E+RWGGAKHE EKDD R+MHPRSSFKAFLEV
Sbjct: 498 LGDVVCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEV 557
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFK-DVGTLDLDTKSIHSKLCDLKIEG-------- 607
VK RSLPWK+YEMDAIHSLQ+ILRNAFK D +LDL+ K+I+++L DLKIEG
Sbjct: 558 VKARSLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLRDLKIEGINDLKIER 617
Query: 608 MKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVED 667
M+ELEAVTSE+VRL TATVPILAVDVDGLVNGWN KIAELTGL + +A GKH LTLVED
Sbjct: 618 MQELEAVTSEIVRLDYTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVED 677
Query: 668 SSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFV 727
SS D VK+ML LAL G+EE+N+QFEIKT GSK++ PI+L+VN CASRDL DNVVGVCFV
Sbjct: 678 SSTDRVKKMLNLALLGEEEKNVQFEIKTLGSKMDSGPISLVVNRCASRDLRDNVVGVCFV 737
Query: 728 AQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKRE 787
A DIT QK VMDKF RIEGDYKAIVQN NPLIPPIFG+DEFGWCCEWNPAM+KLTGWKRE
Sbjct: 738 AHDITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKRE 797
Query: 788 EVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAEC 847
EV+DK+LL E+FGT MA CRLKNQEAFVNLG+VLNKAM+G + EKVPFGFFARNGKY EC
Sbjct: 798 EVMDKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVEC 857
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL V+KKLD EG VTGVFCFLQLAS ELQQALH+QRLSEQTA KRL AL+Y KRQIRNPL
Sbjct: 858 LLSVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPL 917
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
GI+FSRKM+EGT+LG EQK+LL TSAQCQ+QL KILDDSDLD+IIDGYLDLEM EFTL+
Sbjct: 918 CGIVFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGYLDLEMAEFTLH 977
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
EVLV S+SQVM KSN K IRIVN+ A IM ETLYGDS+RLQQVLADFL ISINF PNGG
Sbjct: 978 EVLVTSLSQVMEKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQVLADFLLISINFTPNGG 1037
Query: 1028 QLMVSSSLTKDQLGQSVHLAYLEL 1051
Q++V+ SLTK+QLG+SVHL LEL
Sbjct: 1038 QVVVAGSLTKEQLGKSVHLVKLEL 1061
>gi|37779206|gb|AAO86645.1| PHYA4 photoreceptor [Stellaria longipes]
Length = 1122
Score = 1685 bits (4363), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 806/1055 (76%), Positives = 924/1055 (87%), Gaps = 4/1055 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
M+S +QSS+N+G+S+HSAR+IAQT DAKLHA+FE S FDYS+SVR ST+G +Q
Sbjct: 1 MASPAQSQSSTNSGRSKHSARIIAQTIQDAKLHAEFEESSNEFDYSSSVR-GSTSGVNQL 59
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
P+SD+VT++YL IQKGK IQ FGCLLALD+KTF+VIA+SENAPE+LTMV+HAVPSVGD
Sbjct: 60 PKSDKVTSSYLLQIQKGKFIQLFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVGDL 119
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PV+GIG++I+TIFT PSASALQKALGF +VSLLNPILVHCK SGKPFYAIVHRVT SL+I
Sbjct: 120 PVIGIGTNIRTIFTGPSASALQKALGFTDVSLLNPILVHCKNSGKPFYAIVHRVTRSLVI 179
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSG+M+RL DTM+QEVFELTGYDRVM
Sbjct: 180 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFELTGYDRVM 239
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK L+ YLGLHYPATDIPQAARFLFMKNKVR+I DCRA++V+V
Sbjct: 240 AYKFHDDDHGEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNVRV 299
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP---QK 357
+QDEKL DLTLCGSTLRAPH CH QYMENMNSI SLVMAVVVNDE++E + P K
Sbjct: 300 VQDEKLSVDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQPHK 359
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELE Q LEK ILRTQTLLC
Sbjct: 360 RKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTLLC 419
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIVTQ+PN+MDLVKCDGAALLY NKIW+LG+TP D+QL DI WLS H D
Sbjct: 420 DMLMRDAPLGIVTQNPNVMDLVKCDGAALLYNNKIWKLGITPTDYQLRDIAGWLSRDHTD 479
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAGY GA +LGD VCGMAAVRI+P DM+FWFRS TA+EV+WGGAKHE E
Sbjct: 480 STGLSTDSLHDAGYPGARSLGDTVCGMAAVRITPNDMLFWFRSHTAAEVKWGGAKHETGE 539
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG KMHPR+SFKAFLEVVK RS+PWKDYEMDAIHSLQLILRNAFKDV DL+T IH
Sbjct: 540 KDDGSKMHPRTSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDVEASDLNTSVIH 599
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SK+ DL+I G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKI+ELTG+ V +A+
Sbjct: 600 SKISDLQINGLRELEAVTSEMVRLIETATVPILAVDADGLVNGWNTKISELTGVPVAEAV 659
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH +L E+SSID VKRML LALQG+E++N+QFEIK H S + PI+L+VNACAS+D+
Sbjct: 660 GKHIASLAEESSIDNVKRMLQLALQGEEKKNVQFEIKRHQSNPDSGPISLVVNACASKDV 719
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPA 777
+ NVVGVC +AQDIT QKTVMDKFTRIEGDYKAI+Q+PNPLIPPIFG+DEFGWC EWNPA
Sbjct: 720 NGNVVGVCLIAQDITGQKTVMDKFTRIEGDYKAIIQSPNPLIPPIFGTDEFGWCSEWNPA 779
Query: 778 MVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGF 837
M KLTGW REEVIDK+LL EVFGT+ +CCRLKNQEAFVN GI+LN AMSGQ+ +K+P F
Sbjct: 780 MAKLTGWSREEVIDKMLLGEVFGTHKSCCRLKNQEAFVNFGIILNGAMSGQNTDKLPIEF 839
Query: 838 FARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALA 897
F R GKY ECLLCVNKKLD +GAVTGVFCFLQLASH+LQ ALH+QRL+EQ A KR KALA
Sbjct: 840 FTRFGKYIECLLCVNKKLDGDGAVTGVFCFLQLASHDLQHALHIQRLAEQAATKRAKALA 899
Query: 898 YTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYL 957
Y KRQI+NPLSGI+FS K+++GTE+G +Q+++L TS +CQ QL+KILDDSDLDSIIDGY
Sbjct: 900 YMKRQIKNPLSGIMFSGKILDGTEMGEDQRQVLQTSIRCQGQLNKILDDSDLDSIIDGYC 959
Query: 958 DLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLS 1017
+LEMVEFT+ ++LVASISQVM KS+ KGI++ N E ETLYGDS+RLQQ+LADFLS
Sbjct: 960 ELEMVEFTVQDILVASISQVMAKSSEKGIQMSNNCTEHGFKETLYGDSLRLQQILADFLS 1019
Query: 1018 ISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
IS+NF GG + V+ LTKD++G+SV LA LE R
Sbjct: 1020 ISVNFTSPGGHIGVTVRLTKDKIGESVQLANLEFR 1054
>gi|356572880|ref|XP_003554593.1| PREDICTED: phytochrome type A-like [Glycine max]
gi|227452663|dbj|BAH57342.1| phytochrome A [Glycine max]
gi|227452667|dbj|BAH57344.1| phytochrome A [Glycine max]
Length = 1130
Score = 1681 bits (4353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 809/1041 (77%), Positives = 932/1041 (89%), Gaps = 5/1041 (0%)
Query: 16 SRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVS--STAGGDQQPRSDRVTTAYLHH 73
SR SAR +AQTT+DAKLHA FE SG+SFDYS+SVR+S T GD QPRSDR T++YLH
Sbjct: 20 SRLSARRMAQTTLDAKLHATFEESGSSFDYSSSVRMSPAGTVSGDHQPRSDRATSSYLHQ 79
Query: 74 IQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIF 133
QK KLIQPFGCLLALDEKT KVIAYSENAPE+LTMV+HAVPSVGDHP LGIG+DI+TIF
Sbjct: 80 TQKIKLIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIRTIF 139
Query: 134 TAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMT 193
TAPS++A+QKAL FG+VSL NPILVHCKTSGKPFYAI+HRVTGS+IIDFEPVKP+EVPMT
Sbjct: 140 TAPSSAAIQKALRFGDVSLHNPILVHCKTSGKPFYAIIHRVTGSVIIDFEPVKPHEVPMT 199
Query: 194 AAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVV 253
A+GALQSYKLAAKAITRL+SL +G+ME LC+TM++EVFELTGYDRVMAYKFHEDDHGEV+
Sbjct: 200 ASGALQSYKLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVI 259
Query: 254 SEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLC 313
+E+ + GLEPYLGLHYPATDIPQA RFLFMKNKVRMIVDC A+HV VLQD+K+PFDLTLC
Sbjct: 260 AEVKRPGLEPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLC 319
Query: 314 GSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNT 370
GSTLRA HSCHLQYMENMNS ASLVMAVVVND +E+GD++ PQK KRLWGLVVCH+T
Sbjct: 320 GSTLRAAHSCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHT 379
Query: 371 TPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVT 430
TPRFVPFPLRYAC+FLAQVFA+HV+KELE+EYQI+EKNIL+TQTLLCDML++ PLGIV+
Sbjct: 380 TPRFVPFPLRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVS 439
Query: 431 QSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAG 490
QSPNIMDLVKCDGAALLYKNK+WRLGVTP++ Q+ +I WL E H DSTG DSL DAG
Sbjct: 440 QSPNIMDLVKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAG 499
Query: 491 YLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSF 550
+ GA ALGD+ CGMAA RI+ KD++FWFRS TASE+RWGGAKHEP E+DDGR++HPRSSF
Sbjct: 500 FPGAAALGDIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSF 559
Query: 551 KAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKE 610
KAFLEVVKTRSLPWK YE DAIHSLQLILR+AFK+ ++++ T +I ++L DLKIEGM+E
Sbjct: 560 KAFLEVVKTRSLPWKTYETDAIHSLQLILRDAFKETQSMEISTYAIDTRLGDLKIEGMQE 619
Query: 611 LEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSI 670
L+AVTSE+VRLIETATVPILAVDV+G++NGWNTKIAELTGL VD+AIGKH LTLVED S+
Sbjct: 620 LDAVTSEVVRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLLTLVEDFSV 679
Query: 671 DTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQD 730
D VK+ML +ALQG+EE+N+QFEI+TH KI+ PI+L+VNACASRDL DNVVGVCF+AQD
Sbjct: 680 DRVKKMLDMALQGEEERNVQFEIQTHHMKIDSGPISLVVNACASRDLQDNVVGVCFLAQD 739
Query: 731 ITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVI 790
IT QKT+MDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWCCEWN AM KLTGWKREEV+
Sbjct: 740 ITAQKTMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCCEWNSAMAKLTGWKREEVM 799
Query: 791 DKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLC 850
DK+LL EVFGT +ACCRL+N EA VN IVLN AM+G + EKVPFGFFAR+GK+ EC+L
Sbjct: 800 DKMLLGEVFGTQIACCRLRNHEAVVNFSIVLNTAMAGLETEKVPFGFFARDGKHVECILS 859
Query: 851 VNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGI 910
+ KKLD EG VTGVFCFLQLAS ELQQALH+QR+SEQT+LKRLK L Y KRQI+NPL GI
Sbjct: 860 MTKKLDAEGVVTGVFCFLQLASAELQQALHIQRISEQTSLKRLKDLTYLKRQIQNPLYGI 919
Query: 911 IFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVL 970
+FSRK++EGTELGAEQK+ L T +CQRQ+ KILDDSDLDSIIDGY+DLEMVEFTL+EVL
Sbjct: 920 MFSRKLLEGTELGAEQKQFLQTGIRCQRQISKILDDSDLDSIIDGYMDLEMVEFTLHEVL 979
Query: 971 VASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLM 1030
VAS+SQVM KSNAKGIR+VN+ E+I +ETLYGDSIRLQQVLADFL ISINF P GGQ++
Sbjct: 980 VASLSQVMTKSNAKGIRVVNDVEEKITTETLYGDSIRLQQVLADFLLISINFTPTGGQVV 1039
Query: 1031 VSSSLTKDQLGQSVHLAYLEL 1051
V+++LT+ QLG+ VHLA LE
Sbjct: 1040 VAATLTQQQLGKLVHLANLEF 1060
>gi|227452669|dbj|BAH57345.1| phytochrome A [Glycine max]
Length = 1094
Score = 1680 bits (4350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 810/1042 (77%), Positives = 933/1042 (89%), Gaps = 5/1042 (0%)
Query: 16 SRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVS--STAGGDQQPRSDRVTTAYLHH 73
SR SAR +AQTT+DAKLHA FE SG+SFDYS+SVR+S T GD QPRSDR T++YLH
Sbjct: 20 SRLSARRMAQTTLDAKLHATFEESGSSFDYSSSVRMSPAGTVSGDHQPRSDRATSSYLHQ 79
Query: 74 IQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIF 133
QK KLIQPFGCLLALDEKT KVIAYSENAPE+LTMV+HAVPSVGDHP LGIG+DI+TIF
Sbjct: 80 TQKIKLIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIRTIF 139
Query: 134 TAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMT 193
TAPS++A+QKAL FG+VSL NPILVHCKTSGKPFYAI+HRVTGS+IIDFEPVKP+EVPMT
Sbjct: 140 TAPSSAAIQKALRFGDVSLHNPILVHCKTSGKPFYAIIHRVTGSVIIDFEPVKPHEVPMT 199
Query: 194 AAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVV 253
A+GALQSYKLAAKAITRL+SL +G+ME LC+TM++EVFELTGYDRVMAYKFHEDDHGEV+
Sbjct: 200 ASGALQSYKLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVI 259
Query: 254 SEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLC 313
+E+ + GLEPYLGLHYPATDIPQA RFLFMKNKVRMIVDC A+HV VLQD+K+PFDLTLC
Sbjct: 260 AEVKRPGLEPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLC 319
Query: 314 GSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNT 370
GSTLRA HSCHLQYMENMNS ASLVMAVVVND +E+GD++ PQK KRLWGLVVCH+T
Sbjct: 320 GSTLRAAHSCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHT 379
Query: 371 TPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVT 430
TPRFVPFPLRYAC+FLAQVFA+HV+KELE+EYQI+EKNIL+TQTLLCDML++ PLGIV+
Sbjct: 380 TPRFVPFPLRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVS 439
Query: 431 QSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAG 490
QSPNIMDLVKCDGAALLYKNK+WRLGVTP++ Q+ +I WL E H DSTG DSL DAG
Sbjct: 440 QSPNIMDLVKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAG 499
Query: 491 YLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSF 550
+ GA ALGD+ CGMAA RI+ KD++FWFRS TASE+RWGGAKHEP E+DDGR++HPRSSF
Sbjct: 500 FPGAAALGDIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSF 559
Query: 551 KAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKE 610
KAFLEVVKTRSLPWK YE DAIHSLQLILR+AFK+ ++++ T +I ++L DLKIEGM+E
Sbjct: 560 KAFLEVVKTRSLPWKTYETDAIHSLQLILRDAFKETQSMEISTYAIDTRLGDLKIEGMQE 619
Query: 611 LEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSI 670
L+AVTSE+VRLIETATVPILAVDV+G++NGWNTKIAELTGL VD+AIGKH LTLVED S+
Sbjct: 620 LDAVTSEVVRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLLTLVEDFSV 679
Query: 671 DTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQD 730
D VK+ML +ALQG+EE+N+QFEI+TH KI+ PI+L+VNACASRDL DNVVGVCF+AQD
Sbjct: 680 DRVKKMLDMALQGEEERNVQFEIQTHHMKIDSGPISLVVNACASRDLQDNVVGVCFLAQD 739
Query: 731 ITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVI 790
IT QKT+MDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWCCEWN AM KLTGWKREEV+
Sbjct: 740 ITAQKTMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCCEWNSAMAKLTGWKREEVM 799
Query: 791 DKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLC 850
DK+LL EVFGT +ACCRL+N EA VN IVLN AM+G + EKVPFGFFAR+GK+ EC+L
Sbjct: 800 DKMLLGEVFGTQIACCRLRNHEAVVNFSIVLNTAMAGLETEKVPFGFFARDGKHVECILS 859
Query: 851 VNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGI 910
+ KKLD EG VTGVFCFLQLAS ELQQALH+QR+SEQT+LKRLK L Y KRQI+NPL GI
Sbjct: 860 MTKKLDAEGVVTGVFCFLQLASAELQQALHIQRISEQTSLKRLKDLTYLKRQIQNPLYGI 919
Query: 911 IFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVL 970
+FSRK++EGTELGAEQK+ L T +CQRQ+ KILDDSDLDSIIDGY+DLEMVEFTL+EVL
Sbjct: 920 MFSRKLLEGTELGAEQKQFLQTGIRCQRQISKILDDSDLDSIIDGYMDLEMVEFTLHEVL 979
Query: 971 VASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLM 1030
VAS+SQVM KSNAKGIR+VN+ E+I +ETLYGDSIRLQQVLADFL ISINF P GGQ++
Sbjct: 980 VASLSQVMTKSNAKGIRVVNDVEEKITTETLYGDSIRLQQVLADFLLISINFTPTGGQVV 1039
Query: 1031 VSSSLTKDQLGQSVHLAYLELR 1052
V+++LT+ QLG+ VHLA LE R
Sbjct: 1040 VAATLTQQQLGKLVHLANLEFR 1061
>gi|227452665|dbj|BAH57343.1| phytochrome A [Glycine max]
Length = 1130
Score = 1678 bits (4345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 808/1041 (77%), Positives = 931/1041 (89%), Gaps = 5/1041 (0%)
Query: 16 SRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVS--STAGGDQQPRSDRVTTAYLHH 73
SR SAR +AQTT+DAKLHA FE SG+SFDYS+SVR+S T GD QPRSDR T++YLH
Sbjct: 20 SRLSARRMAQTTLDAKLHATFEESGSSFDYSSSVRMSPAGTVSGDHQPRSDRATSSYLHQ 79
Query: 74 IQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIF 133
QK KLIQPFGCLLALDEKT KVIAYSENAPE+LTMV+HAVPSVGDHP LGIG+DI+TIF
Sbjct: 80 TQKIKLIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIRTIF 139
Query: 134 TAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMT 193
TAPS++A+QKAL FG+VSL NPILVHCKTSGKPFYAI+HRVTGS+IIDFEPVKP+EVPMT
Sbjct: 140 TAPSSAAIQKALRFGDVSLHNPILVHCKTSGKPFYAIIHRVTGSVIIDFEPVKPHEVPMT 199
Query: 194 AAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVV 253
A+GALQSYKLAAKAITRL+SL +G+ME LC+TM++EVFELTGYDRVMAYKFHEDDHGEV+
Sbjct: 200 ASGALQSYKLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVI 259
Query: 254 SEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLC 313
+E+ + GLEPYLGLHYPATDIPQA RFLFMKNKVRMIVDC A+HV VLQD+K+PFDLTLC
Sbjct: 260 AEVKRPGLEPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLC 319
Query: 314 GSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNT 370
GSTLRA HSCHLQYMENMNS ASLVMAVVVND +E+GD++ PQK KRLWGLVVCH+T
Sbjct: 320 GSTLRAAHSCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHT 379
Query: 371 TPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVT 430
TPRFVPFPLRYAC+FLAQVFA+HV+KELE+EYQI+EKNIL+TQTLLCDML++ PLGIV+
Sbjct: 380 TPRFVPFPLRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVS 439
Query: 431 QSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAG 490
QSPNIMDLVKCDGAALLYKNK+WRLGVTP++ Q+ +I WL E H DSTG DSL DAG
Sbjct: 440 QSPNIMDLVKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAG 499
Query: 491 YLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSF 550
+ GA ALGD+ CGMAA RI+ KD++FWFRS TASE+RWGGAKHEP E+DDGR++HPRSSF
Sbjct: 500 FPGAAALGDIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSF 559
Query: 551 KAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKE 610
KAFLEVVKTRSLPWK YE DAIHSLQLILR+AFK+ ++++ T +I ++L DLKIEGM+E
Sbjct: 560 KAFLEVVKTRSLPWKTYETDAIHSLQLILRDAFKETQSMEISTYAIDTRLGDLKIEGMQE 619
Query: 611 LEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSI 670
L+AVTSE+VRLIETATVPILAVDV+G++NGWNTKIAELTGL VD+AIGKH LTLVED S+
Sbjct: 620 LDAVTSEVVRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLLTLVEDFSV 679
Query: 671 DTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQD 730
D VK+ML +ALQG+EE+N+QFEI+TH KI+ PI+L+VNACASRDL DNVVGVCF+AQD
Sbjct: 680 DRVKKMLDMALQGEEERNVQFEIQTHHMKIDSGPISLVVNACASRDLQDNVVGVCFLAQD 739
Query: 731 ITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVI 790
IT QKT+MDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWCCEWN AM KLTGWKREEV+
Sbjct: 740 ITAQKTMMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCCEWNSAMAKLTGWKREEVM 799
Query: 791 DKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLC 850
DK+LL EVFGT +ACCRL+N EA VN IVLN AM+G + EKVPFGFFAR+GK+ EC+L
Sbjct: 800 DKMLLGEVFGTQIACCRLRNHEAVVNFSIVLNTAMAGLETEKVPFGFFARDGKHVECILS 859
Query: 851 VNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGI 910
+ KKLD EG VTGVFCFLQLAS ELQQALH+QR+SEQT+LKRLK L Y KRQI+NPL GI
Sbjct: 860 MTKKLDAEGVVTGVFCFLQLASAELQQALHIQRISEQTSLKRLKDLTYLKRQIQNPLYGI 919
Query: 911 IFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVL 970
+FSRK++EGTELGAEQK+ L T +CQRQ+ KILDDSDLDSIIDGY+DLEMVEFTL+EVL
Sbjct: 920 MFSRKLLEGTELGAEQKQFLQTGIRCQRQISKILDDSDLDSIIDGYMDLEMVEFTLHEVL 979
Query: 971 VASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLM 1030
VAS+SQVM KSNAKGIR+VN+ E+I +ETLYGDSIRLQQVLADFL ISINF P GGQ++
Sbjct: 980 VASLSQVMTKSNAKGIRVVNDVEEKITTETLYGDSIRLQQVLADFLLISINFTPTGGQVV 1039
Query: 1031 VSSSLTKDQLGQSVHLAYLEL 1051
V+++LT+ QL + VHLA LE
Sbjct: 1040 VAATLTQQQLRKLVHLANLEF 1060
>gi|37779204|gb|AAO86644.1| PHYA3 photoreceptor [Stellaria longipes]
Length = 1123
Score = 1675 bits (4337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 802/1056 (75%), Positives = 920/1056 (87%), Gaps = 5/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
M+S +QSS+N+G+S+HSAR+IAQT DAKLHA+FE S FDYS+SVR ST+G +Q
Sbjct: 1 MASPAQSQSSTNSGRSKHSARIIAQTIQDAKLHAEFEESSNEFDYSSSVR-GSTSGVNQL 59
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
P+SD+VT++YL IQKGK IQPFGCLLALD+KTF+VIA+SENAPE+LTMV+HAVPSVGD
Sbjct: 60 PQSDKVTSSYLLQIQKGKFIQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVGDL 119
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PV+GIG+DI+TIFT PSASALQKALGF +VSLLNPILVHCK SGKPFYAIVHRVT SL+I
Sbjct: 120 PVIGIGTDIRTIFTDPSASALQKALGFTDVSLLNPILVHCKNSGKPFYAIVHRVTRSLVI 179
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSG+M+RL DTM+QEVFELTGYDRVM
Sbjct: 180 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFELTGYDRVM 239
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK L+ YLGLHYPATDIPQAARFLFMKNKVR+I DCRA++V+V
Sbjct: 240 AYKFHDDDHGEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNVRV 299
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP---QK 357
+QDEKL DLTLCGSTLRAPH CH QYMENMNSI SLVMAVVVNDE++E + P K
Sbjct: 300 VQDEKLSVDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQPHK 359
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELE Q LEK ILRTQTLLC
Sbjct: 360 RKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELESQFLEKKILRTQTLLC 419
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIVTQ+PN+MDLVKCDGAALLY NKIW+LG++P D+QL DI WLS H D
Sbjct: 420 DMLMRDAPLGIVTQNPNVMDLVKCDGAALLYNNKIWKLGISPTDYQLRDIAGWLSRDHTD 479
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAGY GA +LGD VCGMAAVRI+ +M+FWFRS TA+EV+WGGAKHE E
Sbjct: 480 STGLSTDSLHDAGYPGARSLGDTVCGMAAVRITLNNMLFWFRSHTAAEVKWGGAKHETGE 539
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG KMHPR+SFKAFLEVVK RS+PWKDYEMDAIHSLQLILRNAFKDV DL+T IH
Sbjct: 540 KDDGSKMHPRTSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDVEASDLNTSVIH 599
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SK+ DL+I G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKI ELTG+ V +A+
Sbjct: 600 SKISDLQINGLRELEAVTSEMVRLIETATVPILAVDADGLVNGWNTKIFELTGVPVAEAV 659
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH +L E+SSID VKRML LALQG+E++N+QFEIK H S + PI+L+VNACAS+D+
Sbjct: 660 GKHIASLAEESSIDNVKRMLQLALQGEEKKNVQFEIKRHQSNPDSSPISLVVNACASKDV 719
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPA 777
+ NVVGVC + QDIT QKTVMDKFTRIEGDYKAI+Q+PNPLIPPIFG+DEFGWC EWNPA
Sbjct: 720 NGNVVGVCLITQDITGQKTVMDKFTRIEGDYKAIIQSPNPLIPPIFGTDEFGWCSEWNPA 779
Query: 778 MVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGF 837
M KLTGW REEVIDK+LL EVFGT +CCRLKNQEAFVN GI+LN AMSGQ+ +K+P F
Sbjct: 780 MAKLTGWSREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNFGIILNGAMSGQNTDKLPIEF 839
Query: 838 FARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALA 897
F R GKY ECLLCVNKKLD +GAVTGVFCFLQLASH+LQ ALH+QRL+EQ A KR KALA
Sbjct: 840 FTRFGKYIECLLCVNKKLDGDGAVTGVFCFLQLASHDLQHALHIQRLAEQAATKRAKALA 899
Query: 898 YTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYL 957
Y KRQI+NPLSGI+FS K+++GTE+G +Q+++L TS +CQ QL+KILDDSDLDSIIDGY
Sbjct: 900 YMKRQIKNPLSGIMFSGKILDGTEMGEDQRQVLQTSIRCQGQLNKILDDSDLDSIIDGYC 959
Query: 958 DLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNE-TAEQIMSETLYGDSIRLQQVLADFL 1016
+LEMVEFT+ ++LVAS QVM KSN KGI+I N+ T E + ETLYGDS+RLQQ+LADFL
Sbjct: 960 ELEMVEFTVQDILVASTCQVMAKSNEKGIQIANDSTTEHGLKETLYGDSLRLQQILADFL 1019
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
IS+NF P GG + + LTKD++G+S+ A LE R
Sbjct: 1020 WISVNFTPAGGNVGIKVRLTKDKIGESIQHANLEFR 1055
>gi|186478305|ref|NP_001117256.1| phytochrome A [Arabidopsis thaliana]
gi|332190342|gb|AEE28463.1| phytochrome A [Arabidopsis thaliana]
Length = 1014
Score = 1664 bits (4310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 791/948 (83%), Positives = 872/948 (91%), Gaps = 4/948 (0%)
Query: 109 MVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFY 168
M +HAVPSVG+HPVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHC+TS KPFY
Sbjct: 1 MASHAVPSVGEHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFY 60
Query: 169 AIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQ 228
AI+HRVTGS+IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+Q
Sbjct: 61 AIIHRVTGSIIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQ 120
Query: 229 EVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVR 288
EVFELTGYDRVMAYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVR
Sbjct: 121 EVFELTGYDRVMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVR 180
Query: 289 MIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEE 348
MIVDC A+H +VLQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+
Sbjct: 181 MIVDCNAKHARVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDG 240
Query: 349 EGD----NTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQI 404
EGD T PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+EL+ Q+
Sbjct: 241 EGDAPDATTQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQM 300
Query: 405 LEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQL 464
+EKNILRTQTLLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L
Sbjct: 301 VEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHL 360
Query: 465 HDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTAS 524
+I SWL EYHMDSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA
Sbjct: 361 QEIASWLCEYHMDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAG 420
Query: 525 EVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK 584
EVRWGGAKH+PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK
Sbjct: 421 EVRWGGAKHDPDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK 480
Query: 585 DVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTK 644
D T D++TK I+SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTK
Sbjct: 481 DSETTDVNTKVIYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTK 540
Query: 645 IAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDP 704
IAELTGLSVD+AIGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + P
Sbjct: 541 IAELTGLSVDEAIGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGP 600
Query: 705 ITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG 764
I+L+VNACASRDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG
Sbjct: 601 ISLVVNACASRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFG 660
Query: 765 SDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKA 824
+DEFGWC EWNPAM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAFVNLGIVLN A
Sbjct: 661 TDEFGWCTEWNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNA 720
Query: 825 MSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRL 884
++ QDPEKV F FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL
Sbjct: 721 VTSQDPEKVSFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRL 780
Query: 885 SEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKIL 944
+E+TA+KRLKALAY KRQIRNPLSGI+F+RKM+EGTELG EQ+R+L TSA CQ+QL KIL
Sbjct: 781 AERTAVKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKIL 840
Query: 945 DDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGD 1004
DDSDL+SII+G LDLEM EFTLNEVL AS SQVMMKSN K +RI NET E++MS+TLYGD
Sbjct: 841 DDSDLESIIEGCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGD 900
Query: 1005 SIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
SIRLQQVLADF+ +++NF P+GGQL VS+SL KDQLG+SVHLA LE+R
Sbjct: 901 SIRLQQVLADFMLMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIR 948
>gi|1730565|sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A
gi|556667|emb|CAA53165.1| phytochrome A [Petroselinum crispum]
Length = 1129
Score = 1660 bits (4298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 776/1050 (73%), Positives = 905/1050 (86%), Gaps = 10/1050 (0%)
Query: 12 NTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYL 71
N G++ +ARV+ TT+DAK+HADFE SG SFDYS+SVRV+S G + +S+++TTAYL
Sbjct: 12 NPGRANQNARVVL-TTLDAKIHADFEESGNSFDYSSSVRVTSAVGENSSIQSNKLTTAYL 70
Query: 72 HHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKT 131
HHIQKGKLIQP GCLLA+DEK+FK++AYSENAPE+LTMV+HAVPSVG+HPVLGIG+D++T
Sbjct: 71 HHIQKGKLIQPVGCLLAVDEKSFKIMAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRT 130
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
IFTAPSA+ALQKA+GF +++LLNPILVHCKTSGKPFYAI HRVTGSLIIDFEPVKPYEVP
Sbjct: 131 IFTAPSAAALQKAVGFTDINLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEVP 190
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
MTAAGALQSYKLA+KA+ RLQ+LP GSMERLCDTM+QEVFELTGYDRVMAYKFH+DDHGE
Sbjct: 191 MTAAGALQSYKLASKAVNRLQALPGGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGE 250
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
V +E+TK GLEPY GLHYPATD+PQAARFLF+KNKVRMI DCRA VLQDEKLPF+LT
Sbjct: 251 VTAEVTKPGLEPYFGLHYPATDVPQAARFLFLKNKVRMICDCRANSAPVLQDEKLPFELT 310
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEE--EGDNTLPQKRKRLWGLVVCHN 369
LCGSTLRAPHSCHLQYMENMNSIASLVMAVV+ND +E E + K K+LWGLVVCHN
Sbjct: 311 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVINDSDEVVESSDRNSVKSKKLWGLVVCHN 370
Query: 370 TTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIV 429
T+PRFVPFPLRYACEFLAQVFAIHV+KELELE QI+EKNILRTQTLLCD+LMRDAPLGIV
Sbjct: 371 TSPRFVPFPLRYACEFLAQVFAIHVSKELELENQIVEKNILRTQTLLCDLLMRDAPLGIV 430
Query: 430 TQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDA 489
+QSPN+MDLVKCDGAALLYKNK++RLG TP+D+QL DIVSWL+EYH DSTGLS DSLYDA
Sbjct: 431 SQSPNMMDLVKCDGAALLYKNKVYRLGATPSDYQLRDIVSWLTEYHTDSTGLSTDSLYDA 490
Query: 490 GYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSS 549
GY GALALGDVVCGMA V+I+ DM+FWFRS A +RWGGAK EPDE DGRKMHPRSS
Sbjct: 491 GYPGALALGDVVCGMAVVKITSHDMLFWFRSHAAGHIRWGGAKAEPDENHDGRKMHPRSS 550
Query: 550 FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF---KDVGT----LDLDTKSIHSKLCD 602
FKAFLEVVKTRS WK++EMDAIHSLQLILR A K V + +T IH+KL D
Sbjct: 551 FKAFLEVVKTRSTTWKEFEMDAIHSLQLILRKALSVEKAVAAQGDEIRSNTDVIHTKLND 610
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LKIEG++ELEAVTSEMVRLIETATVPI AVD D +VNGWNTKIAELTGL VD+A+GKH L
Sbjct: 611 LKIEGIQELEAVTSEMVRLIETATVPIFAVDADEIVNGWNTKIAELTGLPVDQAMGKHLL 670
Query: 663 TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVV 722
TLVEDSS+ TV +L LALQG+EEQ I FE KT+GS+ + PIT++VNACA+R LHDNVV
Sbjct: 671 TLVEDSSVGTVVFLLALALQGKEEQGIPFEFKTYGSREDSVPITVVVNACATRGLHDNVV 730
Query: 723 GVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLT 782
GVCFVAQD+T QKT+MDKFTRI+GDYKAIVQNPNPLIPPIFG+DEFGWC EWN AM +L+
Sbjct: 731 GVCFVAQDVTSQKTIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNQAMTELS 790
Query: 783 GWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNG 842
GW+RE+V++K+LL E+FG +CC LK++EAFVNLG+VLN A++GQ EK+ F FFA +G
Sbjct: 791 GWRREDVMNKMLLGEIFGIQTSCCHLKSKEAFVNLGVVLNNALTGQISEKICFSFFATDG 850
Query: 843 KYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQ 902
KY ECLLC +KKL EG VTG+FCFLQLAS ELQQALH+QRL+EQTA+KRLK L+Y +RQ
Sbjct: 851 KYVECLLCASKKLHGEGTVTGIFCFLQLASQELQQALHIQRLTEQTAMKRLKTLSYLRRQ 910
Query: 903 IRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMV 962
+NPL GI F R+ +E +G EQ +L TS CQR ++KILDD+DLDSIIDGYLDLEM
Sbjct: 911 AKNPLCGINFVREKLEEIGMGEEQTKLFRTSVHCQRHVNKILDDTDLDSIIDGYLDLEMS 970
Query: 963 EFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINF 1022
EF L++V VAS SQV M+SN K I++V+ +E++MSETLYGDS+RLQ+VLADF+S+ +N
Sbjct: 971 EFRLHDVYVASRSQVSMRSNGKAIQVVDNFSEEMMSETLYGDSLRLQKVLADFMSVCVNL 1030
Query: 1023 VPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
P GG L +S +LT+D LGQSV L +LE R
Sbjct: 1031 TPVGGHLGISVTLTEDNLGQSVQLVHLEFR 1060
>gi|33333476|gb|AAQ11871.1| phytochrome A1 [Stellaria longipes]
Length = 1122
Score = 1657 bits (4290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 798/1055 (75%), Positives = 909/1055 (86%), Gaps = 4/1055 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
M+S +QSS+N+G+S+HSAR+IAQT DAK HA+FE S FDYS+SVR ST+G +Q
Sbjct: 1 MASRAQSQSSTNSGRSKHSARIIAQTIQDAKFHAEFEESSNEFDYSSSVR-GSTSGVNQL 59
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
P+SD+VT++YL IQKGK IQPFGCLLALD+KTF+VIA+SENAPE+LTMV+HAVPSVGD
Sbjct: 60 PKSDKVTSSYLLQIQKGKFIQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVGDL 119
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PV+GIG+DI+TIFT PSASALQKALGF +VSLLNPILVHCK SGKPFYAIVHRVT SL+I
Sbjct: 120 PVIGIGTDIRTIFTGPSASALQKALGFTDVSLLNPILVHCKNSGKPFYAIVHRVTRSLVI 179
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSG+M RL DTM+QEVFELTGYDRVM
Sbjct: 180 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMVRLVDTMVQEVFELTGYDRVM 239
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK L+ YLGLHYPATDIPQAARFLFMKNKVR+I DCRA++V+V
Sbjct: 240 AYKFHDDDHGEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNVRV 299
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP---QK 357
+QDEKL DLTLCGSTLRAPH CH QYMENMNSI SLVMAVVVNDE++E + P K
Sbjct: 300 VQDEKLSVDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQPHK 359
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELE Q LEK ILRTQTLLC
Sbjct: 360 RKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTLLC 419
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAPLGIVT SPNIMDLVKCDGAALLY NK+WRLG TP D+QL +I WLS HMD
Sbjct: 420 DMLIRDAPLGIVTHSPNIMDLVKCDGAALLYNNKVWRLGSTPTDYQLQEIGGWLSRDHMD 479
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSLYDAGY AL LGD VCGMAAV I+ DM+FWF S TA+E++WGGAKHE E
Sbjct: 480 STGLSTDSLYDAGYPAALELGDSVCGMAAVSITVNDMLFWFTSHTAAEIKWGGAKHEAGE 539
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG KMHPRSSFKAFLEVVK RS+PWKDYEMDAIHSLQLILRNAFKD DL+T IH
Sbjct: 540 KDDGSKMHPRSSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDGEAADLNTSVIH 599
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SK+ DL+I G+KELEAVTSEMVRLIETATVPI AVD DGLVNGWNTKI ELTG+ V++A+
Sbjct: 600 SKISDLQISGLKELEAVTSEMVRLIETATVPIFAVDSDGLVNGWNTKIYELTGIPVEEAV 659
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LVEDSSID VK+ML ALQG+E++N+QFE+K H S + PI+LIVNACAS+D+
Sbjct: 660 GKHIAALVEDSSIDNVKQMLQSALQGEEKKNVQFEVKRHHSIPDSGPISLIVNACASKDV 719
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPA 777
+ NVVGVC +AQDIT QKTVMDKF RIEGDYKAI+Q+PNPLIPPIFG+DEFGWC EWNPA
Sbjct: 720 NGNVVGVCLIAQDITGQKTVMDKFLRIEGDYKAIIQSPNPLIPPIFGTDEFGWCSEWNPA 779
Query: 778 MVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGF 837
M KLTGW REEVIDK+LL EVFG + +CCRLKNQEAFVNLG++LN AMSGQ+ EK+ GF
Sbjct: 780 MAKLTGWTREEVIDKMLLGEVFGMHKSCCRLKNQEAFVNLGVLLNGAMSGQNIEKLSIGF 839
Query: 838 FARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALA 897
F R+GKY ECLLCVNKKL+ EG VTGVFCFLQLASH+LQ ALH+QRL+EQ A KR LA
Sbjct: 840 FTRSGKYIECLLCVNKKLNGEGDVTGVFCFLQLASHDLQHALHIQRLAEQAATKRANVLA 899
Query: 898 YTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYL 957
Y KRQI+NPL+GIIFS K+++GT + +Q+ +L TSA+CQ QL+KILDDSDLDSIIDGY
Sbjct: 900 YMKRQIKNPLAGIIFSGKILDGTNVDEKQRLVLQTSARCQGQLNKILDDSDLDSIIDGYC 959
Query: 958 DLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLS 1017
+LEMVEF + ++LVASISQVM KS+ KGI++ N E ETLYGDS+RLQQ+LADFLS
Sbjct: 960 ELEMVEFAVQDILVASISQVMAKSSEKGIQMSNNCTEHGFKETLYGDSLRLQQILADFLS 1019
Query: 1018 ISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
IS+NF GG + V+ LTKD++G+SV LA LE R
Sbjct: 1020 ISVNFTSPGGHIGVTVRLTKDKIGESVQLANLEFR 1054
>gi|371940268|dbj|BAL45571.1| truncate phytochrome A2 protein [Glycine max]
Length = 979
Score = 1641 bits (4250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 777/933 (83%), Positives = 860/933 (92%), Gaps = 2/933 (0%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQP 82
+A T+DAKLHA FE SG+SFDYS+SVR+S TA G QPR D+VTTAYLHH+QKGK+IQP
Sbjct: 23 MALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQP 82
Query: 83 FGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQ 142
FGCLLALDEKT KVIAYSENAPE+LTMV+HAVPSVGDHP LGIG+DIKT+FTAPSASALQ
Sbjct: 83 FGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQ 142
Query: 143 KALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 202
KALGF EV LLNP+L+HCKTSGKPFYAI+HRVTGS+IIDFEPVKPYEVPMTAAGALQSYK
Sbjct: 143 KALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 202
Query: 203 LAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLE 262
LAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV++EITK GLE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 262
Query: 263 PYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHS 322
PYLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HV+VLQDEKLPFDLTLCGSTLRAPHS
Sbjct: 263 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 322
Query: 323 CHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLR 380
CH QYM NM+SIASLVMAVVVND EE+GD PQKRKRLWGLVVCHNTTPRFVPFPLR
Sbjct: 323 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 382
Query: 381 YACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVK 440
YACEFLAQVFAIHVNKE+ELEYQI+EKNILRTQTLLCD++MRDAPLGIV++SPNIMDLVK
Sbjct: 383 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 442
Query: 441 CDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDV 500
CDGAAL+YKNK+WRLGVTP++ Q+ +I WLSEYHMDSTG S DSL DAG+ AL+LGDV
Sbjct: 443 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDV 502
Query: 501 VCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTR 560
VCGMAAVR++ KD++FWFRS TA+E+RWGGAKHE EKDDGR+MHPRSSFK FL+VVK R
Sbjct: 503 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 562
Query: 561 SLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVR 620
SLPWK+YE+DA+HSLQLILRNAFKD ++DL+TK+I+++L DLKIEGM+ELEAVTSE+VR
Sbjct: 563 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 622
Query: 621 LIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLA 680
LIETATVPILAVDVDGLVNGWN KIAELTGL V +A+GKH LTLVEDSS D VK+ML LA
Sbjct: 623 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLA 682
Query: 681 LQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDK 740
L G+EE+N+QFEIKTHGSK++ PI+L+VNACASRDL DNVVGVCFVA DIT QK VMDK
Sbjct: 683 LLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDK 742
Query: 741 FTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFG 800
FTRIEGDYKAIVQN NPLIPPIFG+DEFGWCCEWNPAM KLTGWKREEV+DK+LL E+FG
Sbjct: 743 FTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELFG 802
Query: 801 TNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGA 860
T+MA CRLKNQEAFVNLG+VLNKAM+G + EKVPFGFFARNGKY ECLL V+KKLD EG
Sbjct: 803 THMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEGL 862
Query: 861 VTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGT 920
VTGVFCFLQLAS ELQQALH+QRLSEQTALKRL AL+Y KRQIRNPL GIIFSRKM+EGT
Sbjct: 863 VTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALSYMKRQIRNPLCGIIFSRKMLEGT 922
Query: 921 ELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
LG EQK+LL TSAQCQ+QL KILDDSDLDSI+
Sbjct: 923 ALGTEQKQLLRTSAQCQQQLSKILDDSDLDSIM 955
>gi|255642605|gb|ACU21560.1| phytochrome A [Medicago sativa]
Length = 1001
Score = 1621 bits (4198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 772/931 (82%), Positives = 855/931 (91%), Gaps = 3/931 (0%)
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
GIG+DI+TIFTAPSASALQKALGF EVSLLNPILVHCKTSGKPFYAI+HRVTGSLIIDFE
Sbjct: 1 GIGTDIRTIFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFE 60
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYK
Sbjct: 61 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYK 120
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHEDDHGEV++E+TK+GLEPYLGLHYPATDIPQAARFL MKNKVRMIVDC A+HVKVLQD
Sbjct: 121 FHEDDHGEVIAEVTKTGLEPYLGLHYPATDIPQAARFLVMKNKVRMIVDCHAKHVKVLQD 180
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN---TLPQKRKR 360
EKLPFDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVND +E+GD+ LPQK+KR
Sbjct: 181 EKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKKKR 240
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELEYQILEKNILRTQTLLCDML
Sbjct: 241 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLCDML 300
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPNIMDLVKCDGAALLY+NK+W LG TP++ Q+ +I W+SEYH DSTG
Sbjct: 301 MRDAPLGIVSQSPNIMDLVKCDGAALLYRNKLWILGSTPSEPQIREIALWMSEYHTDSTG 360
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL DAG+ GAL L D VCGMAAVRI+ KD++FWFRS TA+E+RWGGAKHEP E+DD
Sbjct: 361 LSTDSLSDAGFPGALKLNDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQDD 420
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
GRKMHPRSSFKAFLEVVK RS+PWKD+EMDAIHSLQLILRNA KD +DL++K+I+++L
Sbjct: 421 GRKMHPRSSFKAFLEVVKARSIPWKDFEMDAIHSLQLILRNASKDTDMIDLNSKAINTRL 480
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
DLKIEGM+ELEAVTSEMVRLIETATVPILAVDVDG+VNGWN KI+ELTGL V +AIGKH
Sbjct: 481 NDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGMVNGWNIKISELTGLPVGEAIGKH 540
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
LTLVEDSS D VK+ML LALQGQEE+N+QFEIKTHGSK + PI+LIVNACASRDLH+N
Sbjct: 541 LLTLVEDSSTDIVKKMLNLALQGQEEKNVQFEIKTHGSKTDSGPISLIVNACASRDLHEN 600
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVK 780
VVGVCFVAQDIT QKTVMDKFTRIEGDYKAIVQNPN LIPPIFG+DEFGWCCEWN AM+K
Sbjct: 601 VVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAMIK 660
Query: 781 LTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFAR 840
+TGWKREEV+DK+LL EVFGT+M+CCRLKNQEAFVN GIVLNKAM+G + EKVPFGF +R
Sbjct: 661 ITGWKREEVMDKMLLGEVFGTHMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGFLSR 720
Query: 841 NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK 900
GKY ECLL V+KK+D EG VTGVFCFLQLAS ELQQALH+QRLSEQTALKRLK L Y +
Sbjct: 721 KGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTYMR 780
Query: 901 RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLE 960
RQIRNPLSGI+FS KM+E TELG EQKR+++TS+QCQRQL KILDDSDLDSIIDGYLDLE
Sbjct: 781 RQIRNPLSGIVFSSKMLENTELGTEQKRIVNTSSQCQRQLSKILDDSDLDSIIDGYLDLE 840
Query: 961 MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI 1020
M EFTL+EVLV S+SQVM +SN + IRIVN+ AE I ETLYGDS+RLQQVLADFL ISI
Sbjct: 841 MAEFTLHEVLVTSLSQVMNRSNTRSIRIVNDVAEHIAMETLYGDSLRLQQVLADFLLISI 900
Query: 1021 NFVPNGGQLMVSSSLTKDQLGQSVHLAYLEL 1051
N PNGGQ++++++LTK+QLG+SVHL LEL
Sbjct: 901 NSTPNGGQVVIAATLTKEQLGKSVHLVNLEL 931
>gi|449458123|ref|XP_004146797.1| PREDICTED: phytochrome A-like [Cucumis sativus]
gi|449527803|ref|XP_004170899.1| PREDICTED: phytochrome A-like [Cucumis sativus]
Length = 1148
Score = 1620 bits (4196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 794/1078 (73%), Positives = 907/1078 (84%), Gaps = 30/1078 (2%)
Query: 2 SSSRPAQSSSNTG-------KSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSST 54
S+SRP+Q+S NT +SRHS+R++ QT+IDAKL + FE SG+SFDYS S+ +++
Sbjct: 3 STSRPSQASRNTAGGSSSSSQSRHSSRILTQTSIDAKLQSHFEQSGSSFDYSTSIHLTNN 62
Query: 55 AGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAV 114
TTAYL IQ LIQPFGCLLAL T K+IA+S+NAPE+LT V H V
Sbjct: 63 P---TAAPPATTTTAYLQQIQISNLIQPFGCLLALHPTTLKLIAFSQNAPEMLTTVAHTV 119
Query: 115 PSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRV 174
P +HP+L IG+D++ IFTAP+A+AL KAL F +V+LLNPILVH K+SGKPFYAI+HRV
Sbjct: 120 PDGDNHPLLAIGTDLRGIFTAPTATALLKALAFPDVTLLNPILVHSKSSGKPFYAILHRV 179
Query: 175 TGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELT 234
TGSLIIDFEP+KP +VP+TAAGALQSYKLAAKAITRLQ+LPSGS+ RLCDTM+QEVFELT
Sbjct: 180 TGSLIIDFEPLKPDQVPVTAAGALQSYKLAAKAITRLQALPSGSLVRLCDTMVQEVFELT 239
Query: 235 GYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 294
GYDRVMAYKFH+DDHGEV SE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR
Sbjct: 240 GYDRVMAYKFHDDDHGEVFSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 299
Query: 295 ARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN--------DE 346
A+HVKV+QD+ L FDLTLCGSTLRAPH CHLQYMENM+SIASLVMA+VVN D+
Sbjct: 300 AKHVKVIQDQNLDFDLTLCGSTLRAPHCCHLQYMENMDSIASLVMAIVVNEEEEEENFDQ 359
Query: 347 EEEGDNTLPQ-KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQIL 405
D +L + KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE QIL
Sbjct: 360 SNNNDASLQKHKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIL 419
Query: 406 EKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLH 465
EKNILRTQTLLCDMLMRDAPLGIV+++PNIMDLVK DGAALLY NK+WRLG+TP DF L
Sbjct: 420 EKNILRTQTLLCDMLMRDAPLGIVSRTPNIMDLVKSDGAALLYNNKVWRLGITPTDFHLQ 479
Query: 466 DIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASE 525
DI SW+ EYHMDSTGLS DSLYDAGY GALALGDVVCGMAAVRIS DMIFWFRS TASE
Sbjct: 480 DIASWILEYHMDSTGLSTDSLYDAGYPGALALGDVVCGMAAVRISSNDMIFWFRSHTASE 539
Query: 526 VRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD 585
+RWGGAKHEP EKDDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILRN FKD
Sbjct: 540 IRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTFKD 599
Query: 586 VG--TLDLDTKSIHSKLCDLKI-EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWN 642
++ KSI + L DLKI +G +ELE+VTSEMVRLIETATVPILAVDVDGLVNGWN
Sbjct: 600 RDDHMSEIHRKSIQTTLSDLKILDGRQELESVTSEMVRLIETATVPILAVDVDGLVNGWN 659
Query: 643 TKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKIND 702
+KIAELTGLSVDKAIGK+ LTLV+DSS++ VK+ML LALQGQEE+N+QFEIKTH IN
Sbjct: 660 SKIAELTGLSVDKAIGKNLLTLVKDSSVEIVKKMLVLALQGQEEKNVQFEIKTHNVDINS 719
Query: 703 DPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPI 762
I+LIVNACAS+DL +NVVGVCFVAQDIT QK VMDKFT+++GDYKAIVQNPNPLIPPI
Sbjct: 720 GSISLIVNACASKDLSENVVGVCFVAQDITCQKIVMDKFTKLQGDYKAIVQNPNPLIPPI 779
Query: 763 FGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNM-----ACCRLKNQEAFVNL 817
FG DEFGWC EWN AM KL+GW RE V++K+LL EVFGT + CC+LKNQEAFVNL
Sbjct: 780 FGLDEFGWCTEWNLAMTKLSGWSRESVVNKMLLGEVFGTQLNNSSSCCCQLKNQEAFVNL 839
Query: 818 GIVLNKAMSGQDPEK-VPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQ 876
GIVLN AMSGQDPEK + FGF+ RNG + ECLLCVNK LDR+GAV GVFCFLQLAS ELQ
Sbjct: 840 GIVLNNAMSGQDPEKNISFGFYGRNGMFVECLLCVNKILDRDGAVIGVFCFLQLASQELQ 899
Query: 877 QALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQC 936
QAL +Q+L E+TA RLKAL Y KRQI+NPL GIIFSRKM++ T+LG EQK+LL S C
Sbjct: 900 QALSIQKLCERTASNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLINSVNC 959
Query: 937 QRQLHKILDDS-DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQ 995
QRQ+ K+LD+S DLD II G ++LEMVEF+L EVLV +ISQVMMKS KGI+I NE E+
Sbjct: 960 QRQISKVLDESHDLDHIIQGVIELEMVEFSLYEVLVVAISQVMMKSKGKGIQIENEVGEE 1019
Query: 996 IMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLT-KDQLGQSVHLAYLELR 1052
IM ETLYGD++R+QQ++ADFL IS+++ P GGQLM+S++ T KD S+HL +LE R
Sbjct: 1020 IMCETLYGDNLRVQQIMADFLLISVHYAPTGGQLMLSTTFTNKDHFRNSLHLLHLEFR 1077
>gi|371940266|dbj|BAL45570.1| truncate phytochrome A2 protein [Glycine max]
Length = 894
Score = 1540 bits (3987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 726/871 (83%), Positives = 805/871 (92%), Gaps = 2/871 (0%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQP 82
+A T+DAKLHA FE SG+SFDYS+SVR+S TA G QPR D+VTTAYLHH+QKGK+IQP
Sbjct: 23 MALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQP 82
Query: 83 FGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQ 142
FGCLLALDEKT KVIAYSENAPE+LTMV+HAVPSVGDHP LGIG+DIKT+FTAPSASALQ
Sbjct: 83 FGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQ 142
Query: 143 KALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 202
KALGF EV LLNP+L+HCKTSGKPFYAI+HRVTGS+IIDFEPVKPYEVPMTAAGALQSYK
Sbjct: 143 KALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 202
Query: 203 LAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLE 262
LAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV++EITK GLE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 262
Query: 263 PYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHS 322
PYLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HV+VLQDEKLPFDLTLCGSTLRAPHS
Sbjct: 263 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 322
Query: 323 CHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLR 380
CH QYM NM+SIASLVMAVVVND EE+GD PQKRKRLWGLVVCHNTTPRFVPFPLR
Sbjct: 323 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 382
Query: 381 YACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVK 440
YACEFLAQVFAIHVNKE+ELEYQI+EKNILRTQTLLCD++MRDAPLGIV++SPNIMDLVK
Sbjct: 383 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 442
Query: 441 CDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDV 500
CDGAAL+YKNK+WRLGVTP++ Q+ +I WLSEYHMDSTG S DSL DAG+ AL+LGDV
Sbjct: 443 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDV 502
Query: 501 VCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTR 560
VCGMAAVR++ KD++FWFRS TA+E+RWGGAKHE EKDDGR+MHPRSSFK FL+VVK R
Sbjct: 503 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 562
Query: 561 SLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVR 620
SLPWK+YE+DA+HSLQLILRNAFKD ++DL+TK+I+++L DLKIEGM+ELEAVTSE+VR
Sbjct: 563 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 622
Query: 621 LIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLA 680
LIETATVPILAVDVDGLVNGWN KIAELTGL V +A+GKH LTLVEDSS D VK+ML LA
Sbjct: 623 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLA 682
Query: 681 LQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDK 740
L G+EE+N+QFEIKTHGSK++ PI+L+VNACASRDL DNVVGVCFVA DIT QK VMDK
Sbjct: 683 LLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDK 742
Query: 741 FTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFG 800
FTRIEGDYKAIVQN NPLIPPIFG+DEFGWCCEWNPAM KLTGWKREEV+DK+LL E+FG
Sbjct: 743 FTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMTKLTGWKREEVMDKMLLGELFG 802
Query: 801 TNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGA 860
T+MA CRLKNQEAFVNLG+VLNKAM+G + EKVPFGFFARNGKY ECLL V+KKLD EG
Sbjct: 803 THMAACRLKNQEAFVNLGVVLNKAMTGLETEKVPFGFFARNGKYVECLLSVSKKLDVEGL 862
Query: 861 VTGVFCFLQLASHELQQALHVQRLSEQTALK 891
VTGVFCFLQLAS ELQQALH+QRLSEQTAL+
Sbjct: 863 VTGVFCFLQLASPELQQALHIQRLSEQTALR 893
>gi|37723871|gb|AAR02191.1| phytochrome A [Cyrtosia septentrionalis]
Length = 1118
Score = 1491 bits (3859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/1037 (67%), Positives = 860/1037 (82%), Gaps = 21/1037 (2%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
+IAQTT+DAKL A+F+ GT FDYS S+R A D+Q RS++VT AYL HIQ+GKLIQ
Sbjct: 22 IIAQTTVDAKLDAEFDAMGTCFDYSQSIR----APPDEQ-RSEKVT-AYLQHIQRGKLIQ 75
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLALDEKTFKV+A+SENAPE+LTMV+ VPSVGDHP + IG+D++ +FT+PS +AL
Sbjct: 76 PFGCLLALDEKTFKVLAFSENAPEMLTMVSFTVPSVGDHPTIVIGTDVRNLFTSPSTAAL 135
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
QKALGF EVSLLNPILVHCK+SG+PFYAIVHRVTG LI+DFEPVKP +VPMTAAGALQSY
Sbjct: 136 QKALGFAEVSLLNPILVHCKSSGRPFYAIVHRVTGCLIVDFEPVKPNDVPMTAAGALQSY 195
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI++LQSLPSGSME+LC+T+I+EVFELTGYDRVM YKFHEDDHGEV +EITK GL
Sbjct: 196 KLAAKAISKLQSLPSGSMEKLCNTVIEEVFELTGYDRVMVYKFHEDDHGEVFAEITKPGL 255
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
E Y GLHYPATDIPQAARFLFMKNKVRMI DC A+HVKV QD+KLPFD++ CGSTLRAPH
Sbjct: 256 ESYFGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVYQDKKLPFDISFCGSTLRAPH 315
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEEG-----DNTLPQKRKRLWGLVVCHNTTPRFVP 376
SCHLQYMENMNSIASLVMAVVVN+ EE+G +N+ P +RKRLWGLVVCHN +PRFVP
Sbjct: 316 SCHLQYMENMNSIASLVMAVVVNEGEEDGGNEAEENSPPHRRKRLWGLVVCHNESPRFVP 375
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD-APLGIVTQSPNI 435
FPLRYACEFL QVFAIHVNKE ELE + EK I+RTQT+LCDML+R+ PLGI+TQ+PNI
Sbjct: 376 FPLRYACEFLMQVFAIHVNKEFELENLVKEKKIMRTQTMLCDMLLREFVPLGIITQTPNI 435
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAA LY++KIWRLGVTP++ Q++DIV WLS HMDSTGLS D+L++AGY G
Sbjct: 436 MDLVKCDGAAFLYQDKIWRLGVTPSEPQIYDIVHWLSACHMDSTGLSTDNLHEAGYPGIS 495
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
+LGDVVCGMA RI+ KDM+FWFRS A+ +RWGGAKH+ +KDDGR+MHPRSSFKAFLE
Sbjct: 496 SLGDVVCGMAVARITSKDMLFWFRSPAAASIRWGGAKHDAADKDDGRRMHPRSSFKAFLE 555
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
V K RSLPW D+EM+AIHSLQLILR+ + + I +L +LK+EGM +E VT
Sbjct: 556 VAKVRSLPWGDHEMNAIHSLQLILRDTLNGIE----NKAIIDPQLNELKLEGM--VEVVT 609
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKR 675
+EMVRLIETATVPILAVD DGL+NGWN KIA+LTGLS D+A GKH LT+VEDSSID VKR
Sbjct: 610 NEMVRLIETATVPILAVDADGLINGWNMKIAQLTGLSDDEARGKHLLTIVEDSSIDVVKR 669
Query: 676 MLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQK 735
ML LALQG EEQN+QF++KT G + +D P+ L+VNAC SRD+H NVVG CFVAQD+T QK
Sbjct: 670 MLLLALQGIEEQNVQFQVKTSGVRRDDGPLILVVNACVSRDIHSNVVGACFVAQDVTGQK 729
Query: 736 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLL 795
++DKFT+IEGDYKAIVQNP PLIPPIFG+DEFGWC EWN AM KL+GWKR+EV+DK+LL
Sbjct: 730 FILDKFTKIEGDYKAIVQNPCPLIPPIFGTDEFGWCSEWNLAMTKLSGWKRDEVMDKMLL 789
Query: 796 AEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKL 855
EVFG N +CCR+K+Q+A VN I+++ A SGQ+ EK PF F R+GK+ +CLL V++K+
Sbjct: 790 GEVFGINTSCCRMKSQDALVNFSILISNAFSGQETEKSPFSFMNRSGKHVDCLLSVSRKV 849
Query: 856 DREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRK 915
D EG +TG+FCF+ HELQQ+ Q L +Q +KR+KALAY + +IRNPLSGI+++RK
Sbjct: 850 DVEGNLTGIFCFVLATGHELQQS---QPLVQQETVKRMKALAYIRNEIRNPLSGIMYTRK 906
Query: 916 MMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASIS 975
M+ GT L EQ LL T A+C QL++IL+D +L+ I++ L+LEM EF L +V++ ++S
Sbjct: 907 MLVGTNLDEEQSLLLSTGAKCHNQLNRILEDLNLEDIMNSCLELEMNEFNLKDVVLTAVS 966
Query: 976 QVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSL 1035
QVM+ S KG+ +V + + ++SE +YGDS+RLQQ+ ADFL + + + P+G Q+ ++++L
Sbjct: 967 QVMLPSEGKGVNVVYDLPDGLLSEYVYGDSLRLQQIXADFLLVCVKYSPDGAQVEITANL 1026
Query: 1036 TKDQLGQSVHLAYLELR 1052
K+ LG+S+ L ++E+R
Sbjct: 1027 KKNTLGKSLQLIHVEIR 1043
>gi|20288|emb|CAA32375.1| phytochrome [Oryza sativa Indica Group]
Length = 1128
Score = 1465 bits (3793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 702/1067 (65%), Positives = 869/1067 (81%), Gaps = 22/1067 (2%)
Query: 1 MSSSRPAQ--SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGD 58
MSSSRP Q SSS+ + AR++AQTT+DA+L+A++E G SFDYS V T G +
Sbjct: 1 MSSSRPTQCSSSSSRTRQSSRARILAQTTLDAELNAEYEEYGDSFDYSKLVEAQRTTGPE 60
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
QQ RS++V AYLHHIQ+ KLIQPFGCLLALDEKTF VIA SENAPE+LT V+HAVPSV
Sbjct: 61 QQARSEKVI-AYLHHIQRAKLIQPFGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVD 119
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
D P L IG++++++FT P +ALQKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L
Sbjct: 120 DPPKLRIGTNVRSLFTDPGTTALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCL 179
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
++DFEPVKP E P TAAGALQSYKLAAKAI+++QSLP GSME LC+T+++E+F+LTGYDR
Sbjct: 180 VVDFEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDR 239
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VMAYKFHEDDHGEV +EITK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRAR +
Sbjct: 240 VMAYKFHEDDHGEVFAEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSI 299
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD-----NT 353
K+++DE L D++LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN+ E++ +
Sbjct: 300 KIIEDESLHLDISLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPA 359
Query: 354 LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
QKRK+LWGL+VCH+ +PR+VPFPLRYACEFLAQVFA+HVNKE ELE Q+ EK+ILR Q
Sbjct: 360 QQQKRKKLWGLLVCHHESPRYVPFPLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQ 419
Query: 414 TLLCDMLMRDA-PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLS 472
T+L DML+R++ PL IV+ +PNIMDLVKCDGAALLY K+WRL P + Q+ DI WLS
Sbjct: 420 TMLSDMLLRESSPLSIVSGTPNIMDLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLS 479
Query: 473 EYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
+ H DSTGLS DSL+DAGY GA ALGD++CGMA +I+ KD++FWFRS TA+E+RWGGAK
Sbjct: 480 DVHRDSTGLSTDSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAK 539
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD 592
H+P +KDD R+MHPR SFKAFLEVVK +SLPW DYEMDAIHSLQLILR GTL+ D
Sbjct: 540 HDPSDKDDSRRMHPRLSFKAFLEVVKMKSLPWNDYEMDAIHSLQLILR------GTLNDD 593
Query: 593 TK-----SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAE 647
K S+ +++ DLK++G+ EL+AVTSEMVRL+ETATVPILAVD +GLVNGWN K+AE
Sbjct: 594 IKPTRAASLDNQVGDLKLDGLAELQAVTSEMVRLMETATVPILAVDSNGLVNGWNQKVAE 653
Query: 648 LTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
LTGL VD+AIG+H LT+VE+SS+ V+RMLYLALQG+EE+ ++FE+KTHGSK +D P+ L
Sbjct: 654 LTGLRVDEAIGRHILTVVEESSVPVVQRMLYLALQGKEEKEVKFEVKTHGSKRDDGPVIL 713
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNACASRDLHD+VVGVCFVAQD+T K VMDKFTR+EGDYKAI+ NP+PLIPPIFG+DE
Sbjct: 714 VVNACASRDLHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIIHNPSPLIPPIFGADE 773
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
FGWC EWN AM KLTGW R+EVI+K+LL EVF + A C +KN++AFV+L I++N A++G
Sbjct: 774 FGWCSEWNAAMTKLTGWHRDEVINKMLLGEVFDSTNASCLVKNKDAFVSLCILINSALAG 833
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
+ EK PF FF RNGKY ECLL VN+K++ +G +TGVFCF+Q+ SHELQ ALHVQ+ S+Q
Sbjct: 834 DETEKAPFSFFDRNGKYIECLLSVNRKVNADGVITGVFCFIQVPSHELQHALHVQQASQQ 893
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
AL +LKA +Y + I NPLSG+++SRK ++ T L EQ + ++ + C RQL+KIL D
Sbjct: 894 NALTKLKAYSYMRHAINNPLSGMLYSRKALKNTGLNEEQMKEVNVADSCHRQLNKILSDL 953
Query: 948 DLDSIID--GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDS 1005
D DS+++ LDLEMVEF L +V VA++SQV++ KGIR+ E+ M +T+YGD
Sbjct: 954 DQDSVMNKSSCLDLEMVEFVLQDVFVAAVSQVLITCQGKGIRVSCNLPERYMKQTVYGDG 1013
Query: 1006 IRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+RLQQ+L+DFL +S+ F P GG + +S SLTK+ +G+++HL LELR
Sbjct: 1014 VRLQQILSDFLFVSVKFSPVGGSVEISCSLTKNSIGENLHLIDLELR 1060
>gi|37926849|gb|AAP06787.1| phytochrome A1 apoprotein [Zea mays]
gi|414872502|tpg|DAA51059.1| TPA: phytochromeA1 [Zea mays]
Length = 1131
Score = 1465 bits (3793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/1062 (65%), Positives = 870/1062 (81%), Gaps = 12/1062 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHS--ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGD 58
MSS RPAQSSS++ ++R S AR++AQTT+DA+L+A++E SG SFDYS V + +
Sbjct: 1 MSSLRPAQSSSSSSRTRQSSQARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPPE 60
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
QQ RS +V AYL HIQ+GKLIQPFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V
Sbjct: 61 QQGRSGKVI-AYLQHIQRGKLIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVD 119
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
D P LGIG++++++FT P A+ALQKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L
Sbjct: 120 DPPKLGIGTNVRSLFTDPGATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCL 179
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
++DFEPVKP E P TAAGALQSYKLAAKAI+++QSLP GSM+ LC+T+++EVF+LTGYDR
Sbjct: 180 VVDFEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGGSMQALCNTVVKEVFDLTGYDR 239
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VMAYKFHED+HGEV +EITK G+EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRAR V
Sbjct: 240 VMAYKFHEDEHGEVFAEITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSV 299
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEE--EGDNTLP- 355
K+++DE L D++LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN+ E+ E ++ P
Sbjct: 300 KIIEDEALSIDISLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNENEDDDEPESEQPP 359
Query: 356 --QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
QKRK+LWGL+VCH+ +PR+VPFPLRYACEFLAQVFA+HVNKE ELE QI EK+ILR Q
Sbjct: 360 QQQKRKKLWGLIVCHHESPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQ 419
Query: 414 TLLCDMLMRDA-PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLS 472
T+L DML +++ PL IV+ SPNIMDLVKCDGAALLY +K+WRL P + Q+ DI WLS
Sbjct: 420 TMLSDMLFKESSPLSIVSGSPNIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLS 479
Query: 473 EYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
E H DSTGLS DSL DAGY GA +LGD++CGMA +I+ KD++FWFRS TA+E++WGGAK
Sbjct: 480 EVHGDSTGLSTDSLQDAGYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAK 539
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD 592
H+P ++DD R+MHPR SFKAFLEVVK +SLPW DYEMDAIHSLQLILR D
Sbjct: 540 HDPSDEDDSRRMHPRLSFKAFLEVVKMKSLPWSDYEMDAIHSLQLILRGTLND-ALKPAQ 598
Query: 593 TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLS 652
+ + +++ DLK++G+ EL+AVTSEMVRL+ETATVPILAVD +GLVNGWN K+A+L+GL
Sbjct: 599 SSGLDNQIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVADLSGLR 658
Query: 653 VDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNAC 712
VD+AIG+H LTLVEDSS+ V+RMLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNAC
Sbjct: 659 VDEAIGRHILTLVEDSSVPIVQRMLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNAC 718
Query: 713 ASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCC 772
ASRD+HD+VVGVCFVAQD+T K VMDKFTR+EGDY+AI+ NPNPLIPPIFG+D+FGWC
Sbjct: 719 ASRDMHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYRAIIHNPNPLIPPIFGADQFGWCS 778
Query: 773 EWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEK 832
EWN AM KLTGW R+EVID++LL EVF ++ A C LK+++AFV L I++N A++G++ EK
Sbjct: 779 EWNAAMTKLTGWHRDEVIDRMLLGEVFDSSNASCLLKSKDAFVRLCIIINSALAGEEAEK 838
Query: 833 VPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKR 892
P GFF R+GKY ECLL VN+K++ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTAL+R
Sbjct: 839 APIGFFDRDGKYIECLLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTALRR 898
Query: 893 LKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSI 952
LKA +Y + I PLSG+++SR+ ++GT+L EQ R + + C RQL+KIL D D D+I
Sbjct: 899 LKAFSYMRHAIDKPLSGMLYSRETLKGTDLDEEQMRQVRVADNCHRQLNKILADLDQDNI 958
Query: 953 ID--GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQ 1010
D LDL+M EF L +V+V+++SQV++ KGIR+ E+ M + +YGD IRLQQ
Sbjct: 959 TDKSSCLDLDMAEFVLQDVVVSAVSQVLIGCQGKGIRVACNLPERSMKQKVYGDGIRLQQ 1018
Query: 1011 VLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+L+DFL +S+ F P GG + +SS LTK+ +G+++HL ELR
Sbjct: 1019 ILSDFLFVSVKFSPAGGSVDISSKLTKNSIGENLHLIDFELR 1060
>gi|115454991|ref|NP_001051096.1| Os03g0719800 [Oryza sativa Japonica Group]
gi|122246800|sp|Q10DU0.1|PHYA_ORYSJ RecName: Full=Phytochrome A
gi|158513187|sp|A2XLG5.2|PHYA_ORYSI RecName: Full=Phytochrome A
gi|21321786|gb|AAM47309.1|AF377946_11 phytochrome A [Oryza sativa Japonica Group]
gi|30578176|dbj|BAC76431.1| phytochrome A [Oryza sativa Japonica Group]
gi|50540697|gb|AAT77854.1| phytochrome [Oryza sativa Japonica Group]
gi|108710785|gb|ABF98580.1| Phytochrome A, putative, expressed [Oryza sativa Japonica Group]
gi|113549567|dbj|BAF13010.1| Os03g0719800 [Oryza sativa Japonica Group]
gi|125587730|gb|EAZ28394.1| hypothetical protein OsJ_12374 [Oryza sativa Japonica Group]
gi|215704150|dbj|BAG92990.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1128
Score = 1464 bits (3791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 703/1067 (65%), Positives = 869/1067 (81%), Gaps = 22/1067 (2%)
Query: 1 MSSSRPAQ--SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGD 58
MSSSRP Q SSS+ + AR++AQTT+DA+L+A++E G SFDYS V T G +
Sbjct: 1 MSSSRPTQCSSSSSRTRQSSRARILAQTTLDAELNAEYEEYGDSFDYSKLVEAQRTTGPE 60
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
QQ RS++V AYLHHIQ+ KLIQPFGCLLALDEKTF VIA SENAPE+LT V+HAVPSV
Sbjct: 61 QQARSEKVI-AYLHHIQRAKLIQPFGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVD 119
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
D P L IG+++ ++FT P A+ALQKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L
Sbjct: 120 DPPKLRIGTNVWSLFTDPGATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCL 179
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
++DFEPVKP E P TAAGALQSYKLAAKAI+++QSLP GSME LC+T+++E+F+LTGYDR
Sbjct: 180 VVDFEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDR 239
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VMAYKFHEDDHGEV +EITK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRAR +
Sbjct: 240 VMAYKFHEDDHGEVFAEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSI 299
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD-----NT 353
K+++DE L D++LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN+ E++ +
Sbjct: 300 KIIEDESLHLDISLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPA 359
Query: 354 LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
QKRK+LWGL+VCH+ +PR+VPFPLRYACEFLAQVFA+HVNKE ELE Q+ EK+ILR Q
Sbjct: 360 QQQKRKKLWGLLVCHHESPRYVPFPLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQ 419
Query: 414 TLLCDMLMRDA-PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLS 472
T+L DML+R++ PL IV+ +PNIMDLVKCDGAALLY K+WRL P + Q+ DI WLS
Sbjct: 420 TMLSDMLLRESSPLSIVSGTPNIMDLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLS 479
Query: 473 EYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
+ H DSTGLS DSL+DAGY GA ALGD++CGMA +I+ KD++FWFRS TA+E+RWGGAK
Sbjct: 480 DVHRDSTGLSTDSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAK 539
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD 592
H+P +KDD R+MHPR SFKAFLEVVK +SLPW DYEMDAIHSLQLILR GTL+ D
Sbjct: 540 HDPSDKDDSRRMHPRLSFKAFLEVVKMKSLPWNDYEMDAIHSLQLILR------GTLNDD 593
Query: 593 TK-----SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAE 647
K S+ +++ DLK++G+ EL+AVTSEMVRL+ETATVPILAVD +GLVNGWN K+AE
Sbjct: 594 IKPTRAASLDNQVGDLKLDGLAELQAVTSEMVRLMETATVPILAVDSNGLVNGWNQKVAE 653
Query: 648 LTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
LTGL VD+AIG+H LT+VE+SS+ V+RMLYLALQG+EE+ ++FE+KTHGSK +D P+ L
Sbjct: 654 LTGLRVDEAIGRHILTVVEESSVPVVQRMLYLALQGKEEKEVKFEVKTHGSKRDDGPVIL 713
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNACASRDLHD+VVGVCFVAQD+T K VMDKFTR+EGDYKAI+ NP+PLIPPIFG+DE
Sbjct: 714 VVNACASRDLHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIIHNPSPLIPPIFGADE 773
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
FGWC EWN AM KLTGW R+EVI+K+LL EVF + A C +KN++AFV+L I++N A++G
Sbjct: 774 FGWCSEWNAAMTKLTGWHRDEVINKMLLGEVFDSTNASCLVKNKDAFVSLCILINSALAG 833
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
+ EK PF FF RNGKY ECLL VN+K++ +G +TGVFCF+Q+ SHELQ ALHVQ+ S+Q
Sbjct: 834 DETEKAPFSFFDRNGKYIECLLSVNRKVNADGVITGVFCFIQVPSHELQHALHVQQASQQ 893
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
AL +LKA +Y + I NPLSG+++SRK ++ T L EQ + ++ + C RQL+KIL D
Sbjct: 894 NALTKLKAYSYMRHAINNPLSGMLYSRKALKNTGLNEEQMKEVNVADSCHRQLNKILSDL 953
Query: 948 DLDSIID--GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDS 1005
D DS+++ LDLEMVEF L +V VA++SQV++ KGIR+ E+ M +T+YGD
Sbjct: 954 DQDSVMNKSSCLDLEMVEFVLQDVFVAAVSQVLITCQGKGIRVSCNLPERYMKQTVYGDG 1013
Query: 1006 IRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+RLQQ+L+DFL +S+ F P GG + +S SLTK+ +G+++HL LELR
Sbjct: 1014 VRLQQILSDFLFVSVKFSPVGGSVEISCSLTKNSIGENLHLIDLELR 1060
>gi|39777239|gb|AAR30889.1| phytochrome A [Sorghum bicolor]
gi|39777245|gb|AAR30892.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1464 bits (3789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 684/1041 (65%), Positives = 847/1041 (81%), Gaps = 10/1041 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
AR++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKL
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVI-AYLQHIQRGKL 80
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQPFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGAT 140
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
ALQKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQ
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 200
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++QSLP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
G+EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+ VK+++DE L D++LCGSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-----RLWGLVVCHNTTPRF 374
PHSCHLQYMENMNSIASLVMAVVVN+ EE+ + Q + RLWGL+VCH+ +PR+
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE ELE QI EK+ILR QT+L DML ++A PL IV+ SP
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DAGY G
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A +LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+A
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLND-ALKPVQASGLDNQIGDLKLDGLAELQA 619
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V
Sbjct: 620 VTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIV 679
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 680 QRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EVIDK+
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKM 799
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF ++ A C LK+++ FV L I++N A++G++ EK PFG F RNGKY ECLL VN+
Sbjct: 800 LLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNR 859
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
K++ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA +RLKA +Y + I PLSG+++S
Sbjct: 860 KVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYS 919
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
R+ ++ T L EQ R +H + C RQL+KIL D D D+I D LDL+M EF L +V+V
Sbjct: 920 RETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVV 979
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
+++SQV++ KGIR+ E+ M + +YGD IRLQQ+L+DFL +S+ F P GG + +
Sbjct: 980 SAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVGGSVDI 1039
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
SS LTK+ +G+++HL ELR
Sbjct: 1040 SSKLTKNSIGENLHLIDFELR 1060
>gi|39777243|gb|AAR30891.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1463 bits (3788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 684/1041 (65%), Positives = 847/1041 (81%), Gaps = 10/1041 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
AR++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKL
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVI-AYLQHIQRGKL 80
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQPFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGAT 140
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
ALQKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQ
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 200
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++QSLP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
G+EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+ VK+++DE L D++LCGSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-----RLWGLVVCHNTTPRF 374
PHSCHLQYMENMNSIASLVMAVVVN+ EE+ + Q + RLWGL+VCH+ +PR+
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE ELE QI EK+ILR QT+L DML ++A PL IV+ SP
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DAGY G
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A +LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+A
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLND-ALKPVQASGLDNQIGDLKLDGLAELQA 619
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V
Sbjct: 620 VTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIV 679
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 680 QRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EVIDK+
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKM 799
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF ++ A C LK+++ FV L I++N A++G++ EK PFG F RNGKY ECLL VN+
Sbjct: 800 LLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNR 859
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
K++ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA +RLKA +Y + I PLSG+++S
Sbjct: 860 KVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYS 919
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
R+ ++ T L EQ R +H + C RQL+KIL D D D+I D LDL+M EF L +V+V
Sbjct: 920 RETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVV 979
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
+++SQV++ KGIR+ E+ M + +YGD IRLQQ+L+DFL +S+ F P GG + +
Sbjct: 980 SAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVGGSVDI 1039
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
SS LTK+ +G+++HL ELR
Sbjct: 1040 SSKLTKNSIGENLHLIDFELR 1060
>gi|39777229|gb|AAR30884.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 1463 bits (3788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 684/1041 (65%), Positives = 847/1041 (81%), Gaps = 10/1041 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
AR++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKL
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVI-AYLQHIQRGKL 80
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQPFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGAT 140
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
ALQKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQ
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 200
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++QSLP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
G+EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+ VK+++DE L D++LCGSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-----RLWGLVVCHNTTPRF 374
PHSCHLQYMENMNSIASLVMAVVVN+ EE+ + Q + RLWGL+VCH+ +PR+
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE ELE QI EK+ILR QT+L DML ++A PL IV+ SP
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DAGY G
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A +LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+A
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLND-ALKPVQASGLDNQIGDLKLDGLAELQA 619
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V
Sbjct: 620 VTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIV 679
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 680 QRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EVIDK+
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKM 799
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF ++ A C LK+++ FV L I++N A++G++ EK PFG F RNGKY ECLL VN+
Sbjct: 800 LLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNR 859
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
K++ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA +RLKA +Y + I PLSG+++S
Sbjct: 860 KVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYS 919
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
R+ ++ T L EQ R +H + C RQL+KIL D D D+I D LDL+M EF L +V+V
Sbjct: 920 RETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVV 979
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
+++SQV++ KGIR+ E+ M + +YGD IRLQQ+L+DFL +S+ F P GG + +
Sbjct: 980 SAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVGGSVDI 1039
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
SS LTK+ +G+++HL ELR
Sbjct: 1040 SSKLTKNSIGENLHLIDFELR 1060
>gi|242033161|ref|XP_002463975.1| hypothetical protein SORBIDRAFT_01g009930 [Sorghum bicolor]
gi|241917829|gb|EER90973.1| hypothetical protein SORBIDRAFT_01g009930 [Sorghum bicolor]
Length = 1131
Score = 1461 bits (3783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/1041 (65%), Positives = 846/1041 (81%), Gaps = 10/1041 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
AR++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKL
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVI-AYLQHIQRGKL 80
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQPFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGAT 140
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
ALQKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQ
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 200
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++QSLP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
G+EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+ VK+++DE L D++LCGSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-----RLWGLVVCHNTTPRF 374
PHSCHLQYMENMNSIASLVMAVVVN+ EE+ + Q + RLWGL+VCH+ +PR+
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE ELE QI EK+ILR QT+L DML ++A PL IV+ SP
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DAGY G
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A +LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+A
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLND-ALKPVQASGLDNQIGDLKLDGLAELQA 619
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V
Sbjct: 620 VTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIV 679
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 680 QRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EVIDK+
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKM 799
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF ++ A C LK+++ FV L I++N A++G++ E PFG F RNGKY ECLL VN+
Sbjct: 800 LLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIECLLSVNR 859
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
K++ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA +RLKA +Y + I PLSG+++S
Sbjct: 860 KVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYS 919
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
R+ ++ T L EQ R +H + C RQL+KIL D D D+I D LDL+M EF L +V+V
Sbjct: 920 RETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVV 979
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
+++SQV++ KGIR+ E+ M + +YGD IRLQQ+L+DFL +S+ F P GG + +
Sbjct: 980 SAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVGGSVDI 1039
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
SS LTK+ +G+++HL ELR
Sbjct: 1040 SSKLTKNSIGENLHLIDFELR 1060
>gi|39777231|gb|AAR30885.1| phytochrome A [Sorghum bicolor]
gi|39777233|gb|AAR30886.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 1461 bits (3782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/1041 (65%), Positives = 846/1041 (81%), Gaps = 10/1041 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
AR++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKL
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVI-AYLQHIQRGKL 80
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQPFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGAT 140
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
ALQKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQ
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 200
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++QSLP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
G+EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+ VK+++DE L D++LCGSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-----RLWGLVVCHNTTPRF 374
PHSCHLQYMENMNSIASLVMAVVVN+ EE+ + Q + RLWGL+VCH+ +PR+
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE ELE QI EK+ILR QT+L DML ++A PL IV+ SP
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DAGY G
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A +LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+A
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLND-ALKPVQASGLDNQIGDLKLDGLAELQA 619
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V
Sbjct: 620 VTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIV 679
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 680 QRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EVIDK+
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKM 799
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF ++ A C LK+++ FV L I++N A++G++ E PFG F RNGKY ECLL VN+
Sbjct: 800 LLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIECLLSVNR 859
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
K++ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA +RLKA +Y + I PLSG+++S
Sbjct: 860 KVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYS 919
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
R+ ++ T L EQ R +H + C RQL+KIL D D D+I D LDL+M EF L +V+V
Sbjct: 920 RETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVV 979
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
+++SQV++ KGIR+ E+ M + +YGD IRLQQ+L+DFL +S+ F P GG + +
Sbjct: 980 SAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVGGSVDI 1039
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
SS LTK+ +G+++HL ELR
Sbjct: 1040 SSKLTKNSIGENLHLIDFELR 1060
>gi|11134026|sp|P93526.1|PHYA_SORBI RecName: Full=Phytochrome a
gi|1800215|gb|AAB41397.1| phytochrome A [Sorghum bicolor]
gi|39777227|gb|AAR30883.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 1461 bits (3782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/1041 (65%), Positives = 846/1041 (81%), Gaps = 10/1041 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
AR++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKL
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVI-AYLQHIQRGKL 80
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQPFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGAT 140
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
ALQKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQ
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 200
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++QSLP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
G+EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+ VK+++DE L D++LCGSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-----RLWGLVVCHNTTPRF 374
PHSCHLQYMENMNSIASLVMAVVVN+ EE+ + Q + RLWGL+VCH+ +PR+
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE ELE QI EK+ILR QT+L DML ++A PL IV+ SP
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DAGY G
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A +LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+A
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLND-ALKPVQASGLDNQIGDLKLDGLAELQA 619
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V
Sbjct: 620 VTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIV 679
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 680 QRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EVIDK+
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKM 799
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF ++ A C LK+++ FV L I++N A++G++ E PFG F RNGKY ECLL VN+
Sbjct: 800 LLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIECLLSVNR 859
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
K++ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA +RLKA +Y + I PLSG+++S
Sbjct: 860 KVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYS 919
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
R+ ++ T L EQ R +H + C RQL+KIL D D D+I D LDL+M EF L +V+V
Sbjct: 920 RETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVV 979
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
+++SQV++ KGIR+ E+ M + +YGD IRLQQ+L+DFL +S+ F P GG + +
Sbjct: 980 SAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVGGSVDI 1039
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
SS LTK+ +G+++HL ELR
Sbjct: 1040 SSKLTKNSIGENLHLIDFELR 1060
>gi|39777247|gb|AAR30893.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777249|gb|AAR30894.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777257|gb|AAR30898.1| phytochrome A [Sorghum bicolor subsp. x drummondii]
Length = 1131
Score = 1459 bits (3777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/1039 (65%), Positives = 845/1039 (81%), Gaps = 10/1039 (0%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKLIQ
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVI-AYLQHIQRGKLIQ 82
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+AL
Sbjct: 83 PFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATAL 142
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
QKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQSY
Sbjct: 143 QKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSY 202
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+++QSLP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK G+
Sbjct: 203 KLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGI 262
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+ VK+++DE L D++LCGSTLRAPH
Sbjct: 263 EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPH 322
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-----RLWGLVVCHNTTPRFVP 376
SCHLQYMENMNSIASLVMAVVVN+ EE+ + Q + RLWGL+VCH+ +PR+VP
Sbjct: 323 SCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVP 382
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSPNI 435
FPLRYACEFLAQVFA+HVNKE ELE QI EK+ILR QT+L DML ++A PL IV+ SPNI
Sbjct: 383 FPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNI 442
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DAGY GA
Sbjct: 443 MDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAA 502
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
+LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAFLE
Sbjct: 503 SLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLE 562
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVK +SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+AVT
Sbjct: 563 VVKMKSLPWSDYEMDAIHSLQLILRGTLND-ALKPVQASGLDNQIGDLKLDGLAELQAVT 621
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKR 675
SEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V+R
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681
Query: 676 MLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQK 735
MLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T K
Sbjct: 682 MLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 736 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLL 795
VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EVIDK+LL
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLL 801
Query: 796 AEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKL 855
EVF ++ A C LK+++ FV L I++N A++G++ EK PFG F RNGKY ECLL VN+K+
Sbjct: 802 GEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNRKV 861
Query: 856 DREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRK 915
+ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA +RLKA +Y + I PLSG+++SR+
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRE 921
Query: 916 MMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLVAS 973
++ T L EQ R +H + C RQL+KIL D D D+I D LDL+M EF L +V+V++
Sbjct: 922 TLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSA 981
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
+SQV++ KGIR+ E+ M + +YGD IRLQQ+L+DFL +S+ F P GG + +SS
Sbjct: 982 VSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVGGSVDISS 1041
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
LTK+ +G+++HL ELR
Sbjct: 1042 KLTKNSIGENLHLIDFELR 1060
>gi|39777241|gb|AAR30890.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1459 bits (3777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/1039 (65%), Positives = 845/1039 (81%), Gaps = 10/1039 (0%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKLIQ
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVI-AYLQHIQRGKLIQ 82
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+AL
Sbjct: 83 PFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATAL 142
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
QKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQSY
Sbjct: 143 QKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSY 202
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+++QSLP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK G+
Sbjct: 203 KLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGI 262
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+ VK+++DE L D++LCGSTLRAPH
Sbjct: 263 EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPH 322
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-----RLWGLVVCHNTTPRFVP 376
SCHLQYMENMNSIASLVMAVVVN+ EE+ + Q + RLWGL+VCH+ +PR+VP
Sbjct: 323 SCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVP 382
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSPNI 435
FPLRYACEFLAQVFA+HVNKE ELE QI EK+ILR QT+L DML ++A PL IV+ SPNI
Sbjct: 383 FPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNI 442
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DAGY GA
Sbjct: 443 MDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAA 502
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
+LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAFLE
Sbjct: 503 SLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLE 562
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVK +SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+AVT
Sbjct: 563 VVKMKSLPWSDYEMDAIHSLQLILRGTLND-ALKPVQASGLDNQIGDLKLDGLAELQAVT 621
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKR 675
SEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V+R
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681
Query: 676 MLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQK 735
MLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T K
Sbjct: 682 MLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 736 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLL 795
VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EVIDK+LL
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLL 801
Query: 796 AEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKL 855
EVF ++ A C LK+++ FV L I++N A++G++ EK PFG F RNGKY ECLL VN+K+
Sbjct: 802 GEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNRKV 861
Query: 856 DREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRK 915
+ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA +RLKA +Y + I PLSG+++SR+
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRE 921
Query: 916 MMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLVAS 973
++ T L EQ R +H + C RQL+KIL D D D+I D LDL+M EF L +V+V++
Sbjct: 922 TLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSA 981
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
+SQV++ KGIR+ E+ M + +YGD IRLQQ+L+DFL +S+ F P GG + +SS
Sbjct: 982 VSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVGGSVDISS 1041
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
LTK+ +G+++HL ELR
Sbjct: 1042 KLTKNSIGENLHLIDFELR 1060
>gi|39777251|gb|AAR30895.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1459 bits (3777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/1039 (65%), Positives = 845/1039 (81%), Gaps = 10/1039 (0%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKLIQ
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVI-AYLQHIQRGKLIQ 82
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+AL
Sbjct: 83 PFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATAL 142
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
QKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQSY
Sbjct: 143 QKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSY 202
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+++QSLP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK G+
Sbjct: 203 KLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGI 262
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+ VK+++DE L D++LCGSTLRAPH
Sbjct: 263 EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPH 322
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-----RLWGLVVCHNTTPRFVP 376
SCHLQYMENMNSIASLVMAVVVN+ EE+ + Q + RLWGL+VCH+ +PR+VP
Sbjct: 323 SCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVP 382
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSPNI 435
FPLRYACEFLAQVFA+HVNKE ELE QI EK+ILR QT+L DML ++A PL IV+ SPNI
Sbjct: 383 FPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNI 442
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DAGY GA
Sbjct: 443 MDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAA 502
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
+LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAFLE
Sbjct: 503 SLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLE 562
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVK +SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+AVT
Sbjct: 563 VVKMKSLPWSDYEMDAIHSLQLILRGTLND-ALKPVQASGLDNQIGDLKLDGLAELQAVT 621
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKR 675
SEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V+R
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681
Query: 676 MLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQK 735
MLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T K
Sbjct: 682 MLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 736 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLL 795
VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EVIDK+LL
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLL 801
Query: 796 AEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKL 855
EVF ++ A C LK+++ FV L I++N A++G++ EK PFG F RNGKY ECLL VN+K+
Sbjct: 802 GEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNRKV 861
Query: 856 DREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRK 915
+ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA +RLKA +Y + I PLSG+++SR+
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRE 921
Query: 916 MMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLVAS 973
++ T L EQ R +H + C RQL+KIL D D D+I D LDL+M EF L +V+V++
Sbjct: 922 TLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSA 981
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
+SQV++ KGIR+ E+ M + +YGD IRLQQ+L+DFL +S+ F P GG + +SS
Sbjct: 982 VSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVGGSVDISS 1041
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
LTK+ +G+++HL ELR
Sbjct: 1042 KLTKNSIGENLHLIDFELR 1060
>gi|39777235|gb|AAR30887.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 1459 bits (3776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/1039 (65%), Positives = 845/1039 (81%), Gaps = 10/1039 (0%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKLIQ
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVI-AYLQHIQRGKLIQ 82
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+AL
Sbjct: 83 PFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATAL 142
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
QKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQSY
Sbjct: 143 QKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSY 202
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+++QSLP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK G+
Sbjct: 203 KLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGI 262
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+ VK+++DE L D++LCGSTLRAPH
Sbjct: 263 EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPH 322
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-----RLWGLVVCHNTTPRFVP 376
SCHLQYMENMNSIASLVMAVVVN+ EE+ + Q + RLWGL+VCH+ +PR+VP
Sbjct: 323 SCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVP 382
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSPNI 435
FPLRYACEFLAQVFA+HVNKE ELE QI EK+ILR QT+L DML ++A PL IV+ SPNI
Sbjct: 383 FPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNI 442
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DAGY GA
Sbjct: 443 MDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAA 502
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
+LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAFLE
Sbjct: 503 SLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLE 562
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVK +SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+AVT
Sbjct: 563 VVKMKSLPWSDYEMDAIHSLQLILRGTLND-ALKPVQASGLDNQIGDLKLDGLAELQAVT 621
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKR 675
SEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V+R
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681
Query: 676 MLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQK 735
MLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T K
Sbjct: 682 MLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 736 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLL 795
VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EVIDK+LL
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLL 801
Query: 796 AEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKL 855
EVF ++ A C LK+++ FV L I++N A++G++ EK PFG F RNGKY ECLL VN+K+
Sbjct: 802 GEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNRKV 861
Query: 856 DREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRK 915
+ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA +RLKA +Y + I PLSG+++SR+
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRE 921
Query: 916 MMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLVAS 973
++ T L EQ R +H + C RQL+KIL D D D+I D LDL+M EF L +V+V++
Sbjct: 922 TLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSA 981
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
+SQV++ KGIR+ E+ M + +YGD IRLQQ+L+DFL +S+ F P GG + +SS
Sbjct: 982 VSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVGGSVDISS 1041
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
LTK+ +G+++HL ELR
Sbjct: 1042 KLTKNSIGENLHLIDFELR 1060
>gi|39777237|gb|AAR30888.1| phytochrome A [Sorghum bicolor]
gi|39777253|gb|AAR30896.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777255|gb|AAR30897.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 1459 bits (3776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/1039 (65%), Positives = 845/1039 (81%), Gaps = 10/1039 (0%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKLIQ
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVI-AYLQHIQRGKLIQ 82
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+AL
Sbjct: 83 PFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATAL 142
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
QKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQSY
Sbjct: 143 QKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSY 202
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+++QSLP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK G+
Sbjct: 203 KLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGI 262
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+ VK+++DE L D++LCGSTLRAPH
Sbjct: 263 EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPH 322
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-----RLWGLVVCHNTTPRFVP 376
SCHLQYMENMNSIASLVMAVVVN+ EE+ + Q + RLWGL+VCH+ +PR+VP
Sbjct: 323 SCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVP 382
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSPNI 435
FPLRYACEFLAQVFA+HVNKE ELE QI EK+ILR QT+L DML ++A PL IV+ SPNI
Sbjct: 383 FPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNI 442
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DAGY GA
Sbjct: 443 MDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAA 502
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
+LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAFLE
Sbjct: 503 SLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLE 562
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVK +SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+AVT
Sbjct: 563 VVKMKSLPWSDYEMDAIHSLQLILRGTLND-ALKPVQASGLDNQIGDLKLDGLAELQAVT 621
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKR 675
SEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V+R
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681
Query: 676 MLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQK 735
MLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T K
Sbjct: 682 MLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 736 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLL 795
VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EVIDK+LL
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLL 801
Query: 796 AEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKL 855
EVF ++ A C LK+++ FV L I++N A++G++ EK PFG F RNGKY ECLL VN+K+
Sbjct: 802 GEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAPFGLFDRNGKYIECLLSVNRKV 861
Query: 856 DREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRK 915
+ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA +RLKA +Y + I PLSG+++SR+
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRE 921
Query: 916 MMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLVAS 973
++ T L EQ R +H + C RQL+KIL D D D+I D LDL+M EF L +V+V++
Sbjct: 922 TLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSA 981
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
+SQV++ KGIR+ E+ M + +YGD IRLQQ+L+DFL +S+ F P GG + +SS
Sbjct: 982 VSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVGGSVDISS 1041
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
LTK+ +G+++HL ELR
Sbjct: 1042 KLTKNSIGENLHLIDFELR 1060
>gi|166563|gb|AAA76820.1| phytochrome [Avena sativa]
Length = 1129
Score = 1452 bits (3758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/1041 (66%), Positives = 846/1041 (81%), Gaps = 10/1041 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
ARV+AQTT+DA+L+A++E SG SFDYS V QQ RS++V AYL HIQKGKL
Sbjct: 20 ARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVI-AYLQHIQKGKL 78
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQ FGCLLALDEK+F VIA+SENAPE+LT V+HAVPSV D P LGIG++++++F+ A+
Sbjct: 79 IQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGAT 138
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQ
Sbjct: 139 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 198
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++QSLP GSME LC+T+++EVF+LTGYDRVMAYKFHEDDHGEV SEITK
Sbjct: 199 SYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEITKP 258
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRAR +KV++ E LPFD++LCGS LRA
Sbjct: 259 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRA 318
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ-----KRKRLWGLVVCHNTTPRF 374
PHSCHLQYMENMNSIASLVMAVVVN+ EE+ + Q K+K+LWGL+VCH+ +PR+
Sbjct: 319 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESPRY 378
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVN+E ELE Q+ EKNIL+ QT+L DML R+A PL IV+ +P
Sbjct: 379 VPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSGTP 438
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDLVKCDGAALLY K+WRL P + Q+HDI WLS+ H DSTGLS DSL+DAGY G
Sbjct: 439 NIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPG 498
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A ALGD++CGMA +I+ KD++FWFRS TA+E+RWGGAK++P + DD R+MHPR SFKAF
Sbjct: 499 AAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSFKAF 558
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SLPW DYEMDAIHSLQLILR D + S+ +++ DLK++G+ EL+A
Sbjct: 559 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREA-SLDNQIGDLKLDGLAELQA 617
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVEDSS+ V
Sbjct: 618 VTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEDSSVPVV 677
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHG K +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 678 QRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 737
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDYKAI+ NPNPLIPPIFG+DEFGWC EWN AM KLTGW R+EV+DK+
Sbjct: 738 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVLDKM 797
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF ++ A C LKN++AFV+L +++N A++G++ EK PFGFF R+GKY ECLL N+
Sbjct: 798 LLGEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLSANR 857
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
K + G +TGVFCF+ +ASHELQ AL VQ+ SEQT+LKRLKA +Y + I NPLSG+++S
Sbjct: 858 KENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGMLYS 917
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
RK ++ T+L EQ + +H C Q++KIL D D DSI + LDLEM EF L +V+V
Sbjct: 918 RKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITEKSSCLDLEMAEFLLQDVVV 977
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
A++SQV++ KGIRI E+ M +++YGD +RLQQ+L+DFL IS+ F P GG + +
Sbjct: 978 AAVSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQILSDFLFISVKFSPVGGSVEI 1037
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
SS LTK+ +G+++HL LELR
Sbjct: 1038 SSKLTKNSIGENLHLIDLELR 1058
>gi|39777259|gb|AAR30899.1| phytochrome A [Sorghum propinquum]
Length = 1131
Score = 1450 bits (3754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/1039 (65%), Positives = 842/1039 (81%), Gaps = 10/1039 (0%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKLIQ
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVI-AYLQHIQRGKLIQ 82
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLA DEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+AL
Sbjct: 83 PFGCLLAFDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATAL 142
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
QKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQSY
Sbjct: 143 QKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSY 202
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+++QSLP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK G+
Sbjct: 203 KLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGI 262
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+ VK+++DE L D++LCGSTLRAPH
Sbjct: 263 EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPH 322
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-----RLWGLVVCHNTTPRFVP 376
SCHLQYMENMNSIASLVMAVVVN+ EE+ + Q + RLWGL+VCH+ +PR+VP
Sbjct: 323 SCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVP 382
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSPNI 435
FPLRYACEFLAQVFA+HVNKE ELE QI EK+ILR QT+L DML ++A PL IV+ SPNI
Sbjct: 383 FPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNI 442
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DA Y GA
Sbjct: 443 MDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDARYPGAA 502
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
+LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAFLE
Sbjct: 503 SLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLE 562
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVK +SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+AVT
Sbjct: 563 VVKMKSLPWSDYEMDAIHSLQLILRGTLND-ALKPVQASGLDNQIGDLKLDGLAELQAVT 621
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKR 675
SEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V+R
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQR 681
Query: 676 MLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQK 735
MLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T K
Sbjct: 682 MLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 736 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLL 795
VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EVIDK+LL
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKMLL 801
Query: 796 AEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKL 855
EVF ++ A C LK+++ FV L I++N A++G++ EK FG F RNGKY ECLL VN+K+
Sbjct: 802 GEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAEKAQFGLFDRNGKYIECLLSVNRKV 861
Query: 856 DREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRK 915
+ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA +RLKA +Y + I PLSG+++SR+
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYSRE 921
Query: 916 MMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLVAS 973
++ T L EQ R +H + C RQL+KIL D D D+I D LDL+M EF L +V+V++
Sbjct: 922 TLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVVSA 981
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
+SQV++ KGIR+ E+ M + +YGD IRLQQ+L+DFL +S+ F P GG + +SS
Sbjct: 982 VSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVGGSVDISS 1041
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
LTK+ +G+++HL ELR
Sbjct: 1042 KLTKNSIGENLHLIDFELR 1060
>gi|130186|sp|P19862.1|PHYA1_MAIZE RecName: Full=Phytochrome A
gi|29293912|gb|AAO73469.1| phytochrome A2 [Zea mays]
gi|129560387|gb|ABO30572.1| phytochrome A2 [Zea mays]
gi|413933241|gb|AFW67792.1| phytochrome A [Zea mays]
Length = 1131
Score = 1449 bits (3752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/1039 (65%), Positives = 847/1039 (81%), Gaps = 10/1039 (0%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKLIQ
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPPEQQGRSGKVI-AYLQHIQRGKLIQ 82
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+AL
Sbjct: 83 PFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATAL 142
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
QKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQSY
Sbjct: 143 QKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSY 202
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+++QSLP GSME LC+T+++EVF+LTGYDRVMAYKFHED+HGEV +EITK G+
Sbjct: 203 KLAAKAISKIQSLPGGSMEALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEITKPGI 262
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPY+GLHYPATDIPQAARFLFMKNKVRMI DCRAR VK+++DE L D++LCGSTLRAPH
Sbjct: 263 EPYIGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGSTLRAPH 322
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ-----KRKRLWGLVVCHNTTPRFVP 376
SCHL+YMENMNSIASLVMAVVVN+ EE+ + Q K+KRLWGL+VCH+ +PR+VP
Sbjct: 323 SCHLKYMENMNSIASLVMAVVVNENEEDDEPEPEQPPQQQKKKRLWGLIVCHHESPRYVP 382
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSPNI 435
FPLRYACEFLAQVFA+HVNKE ELE QI EKNILR QT+L DML +++ PL IV+ SPNI
Sbjct: 383 FPLRYACEFLAQVFAVHVNKEFELEKQIREKNILRMQTMLSDMLFKESSPLSIVSGSPNI 442
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DAGY GA
Sbjct: 443 MDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAA 502
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
+LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAFLE
Sbjct: 503 SLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLE 562
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKT+SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+AVT
Sbjct: 563 VVKTKSLPWSDYEMDAIHSLQLILRGTLND-ASKPAQASGLDNQIGDLKLDGLAELQAVT 621
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKR 675
SEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V+R
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSLVQR 681
Query: 676 MLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQK 735
MLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T K
Sbjct: 682 MLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 736 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLL 795
VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EV+DK+LL
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNAAMTKLTGWHRDEVVDKMLL 801
Query: 796 AEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKL 855
EVF ++ A C LK+++AFV L IV+N A++G++ EK FGFF RN KY ECLL VN+K+
Sbjct: 802 GEVFNSSNASCLLKSKDAFVRLCIVINSALAGEEAEKASFGFFDRNEKYVECLLSVNRKV 861
Query: 856 DREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRK 915
+ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA ++LKA +Y + I PLSG+++SR+
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRKLKAFSYMRHAINKPLSGMLYSRE 921
Query: 916 MMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLVAS 973
++ T L EQ R + C RQL+KIL D D D+I D LDL+M EF L +V+V++
Sbjct: 922 TLKSTGLNEEQMRQVRVGDNCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLQDVVVSA 981
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
+SQV++ AKGIR+ E+ M + +YGD IRLQQ+++DFL +S+ F P GG + +SS
Sbjct: 982 VSQVLIGCQAKGIRVACNLPERSMKQKVYGDGIRLQQIVSDFLFVSVKFSPAGGSVDISS 1041
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
LTK+ +G+++HL ELR
Sbjct: 1042 KLTKNSIGENLHLIDFELR 1060
>gi|130181|sp|P06593.3|PHYA3_AVESA RecName: Full=Phytochrome A type 3; Short=AP3
gi|16111|emb|CAA26999.1| unnamed protein product [Avena sativa]
Length = 1129
Score = 1449 bits (3752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 690/1041 (66%), Positives = 845/1041 (81%), Gaps = 10/1041 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
ARV+AQTT+DA+L+A++E SG SFDYS V QQ RS++V AYL HIQKGKL
Sbjct: 20 ARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVI-AYLQHIQKGKL 78
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQ FGCLLALDEK+F VIA+SENAPE+LT V+HAVPSV D P LGIG++++++F+ A+
Sbjct: 79 IQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGAT 138
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQ
Sbjct: 139 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 198
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++QSLP GSME LC+T+++EVF+LTGYDRVMAYKFHEDDHGEV SEITK
Sbjct: 199 SYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEITKP 258
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAAR LFMKNKVRMI DCRAR +KV++ E LPFD++LCGS LRA
Sbjct: 259 GLEPYLGLHYPATDIPQAARLLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRA 318
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ-----KRKRLWGLVVCHNTTPRF 374
PHSCHLQYMENMNSIASLVMAVVVN+ EE+ + Q K+K+LWGL+VCH+ +PR+
Sbjct: 319 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESPRY 378
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVN+E ELE Q+ EKNIL+ QT+L DML R+A PL IV+ +P
Sbjct: 379 VPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSGTP 438
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDLVKCDGAALLY K+WRL P + Q+HDI WLS+ H DSTGLS DSL+DAGY G
Sbjct: 439 NIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPG 498
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A ALGD++CGMA +I+ KD++FWFRS TA+E+RWGGAK++P + DD R+MHPR SFKAF
Sbjct: 499 AAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSFKAF 558
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SLPW DYEMDAIHSLQLILR D + S+ +++ DLK++G+ EL+A
Sbjct: 559 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREA-SLDNQIGDLKLDGLAELQA 617
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVEDSS+ V
Sbjct: 618 VTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEDSSVPVV 677
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHG K +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 678 QRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 737
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDYKAI+ NPNPLIPPIFG+DEFGWC EWN AM KLTGW R+EV+DK+
Sbjct: 738 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVLDKM 797
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF ++ A C LKN++AFV+L +++N A++G++ EK PFGFF R+GKY ECLL N+
Sbjct: 798 LLGEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLSANR 857
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
K + G +TGVFCF+ +ASHELQ AL VQ+ SEQT+LKRLKA +Y + I NPLSG+++S
Sbjct: 858 KENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGMLYS 917
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
RK ++ T+L EQ + +H C Q++KIL D D DSI + LDLEM EF L +V+V
Sbjct: 918 RKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITEKSSCLDLEMAEFLLQDVVV 977
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
A++SQV++ KGIRI E+ M +++YGD +RLQQ+L+DFL IS+ F P GG + +
Sbjct: 978 AAVSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQILSDFLFISVKFSPVGGSVEI 1037
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
SS LTK+ +G+++HL LELR
Sbjct: 1038 SSKLTKNSIGENLHLIDLELR 1058
>gi|357117591|ref|XP_003560548.1| PREDICTED: phytochrome A type 3-like [Brachypodium distachyon]
Length = 1131
Score = 1444 bits (3737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/1041 (65%), Positives = 851/1041 (81%), Gaps = 10/1041 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
AR++AQTT+DA+L+A++E +G SF+YS V +QQ RS++V AYL HIQKGK+
Sbjct: 22 ARILAQTTLDAELNAEYEETGDSFNYSKLVEAQRNTPPEQQGRSEKVI-AYLQHIQKGKM 80
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQ FGCLLALDEK+F VIA+S+NAPE+LTMV+HAVPSV D P LGIG++++++FT A+
Sbjct: 81 IQSFGCLLALDEKSFNVIAFSQNAPEMLTMVSHAVPSVDDPPRLGIGTNVRSLFTDQGAT 140
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQ
Sbjct: 141 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 200
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++QSLP GSME LC+T+++EVF+LTGYDRVMAYKFHEDDHGEV +EITK
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFAEITKP 260
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRAR +K+++DE LPFD++LCGS LRA
Sbjct: 261 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIVEDESLPFDISLCGSALRA 320
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ-----KRKRLWGLVVCHNTTPRF 374
PHSCHLQYMENMNSIASLVMAVVVN+ EE+ + Q K+K+LWGL+VCH+ +PR+
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEVEAEQPAQQQKKKKLWGLLVCHHESPRY 380
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE ELE Q+ EK+ILR QT+L DML R+A PL I++ +P
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELENQLREKSILRMQTILSDMLFREASPLTIISGTP 440
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
N+MDLVKCDGAALL+ +K+WRL P + Q+ DI SWLSE H DSTGLS +SL+DAGY G
Sbjct: 441 NVMDLVKCDGAALLHGDKVWRLRDAPTESQIRDIASWLSEVHRDSTGLSTESLHDAGYPG 500
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A ALGD++CGMA +I+ +D++FWFRS TA+E++WGGAKH+P + DDGR+MHPR SFKAF
Sbjct: 501 ASALGDMICGMAVAKINSRDILFWFRSHTAAEIKWGGAKHDPSDMDDGRRMHPRLSFKAF 560
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SL W DYEMDAIHSLQLILR A D G S+ +++ DLK++G+ EL+A
Sbjct: 561 LEVVKMKSLSWSDYEMDAIHSLQLILRGALND-GIKATKGASLDNQIGDLKLDGLAELQA 619
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GL+NGWN K AELTGL VD AIG+H LTLVE+SS+ V
Sbjct: 620 VTSEMVRLMETATVPILAVDGNGLINGWNQKAAELTGLRVDDAIGRHILTLVEESSVPVV 679
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHG K D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 680 QRMLYLALQGKEEKEVRFEVKTHGPKREDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTRIEGDYKAI+ NPNPLIPPIFG+DEFGWC EWN AM LTGW R+EV+DK+
Sbjct: 740 HKLVMDKFTRIEGDYKAIIHNPNPLIPPIFGTDEFGWCSEWNTAMTMLTGWHRDEVVDKM 799
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF ++ A C LKN++AF++L +++N A++G++ +K PFGFF RNGKY ECLL N+
Sbjct: 800 LLGEVFDSSSASCLLKNKDAFISLCVLINSALAGEETDKAPFGFFDRNGKYIECLLSANR 859
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
K + G +TGVFCF+Q+ASHELQ ALHVQ+ SEQT+L++LKA +Y + I NPLSG+++S
Sbjct: 860 KENAGGLITGVFCFIQVASHELQHALHVQQASEQTSLRKLKAFSYMRHAINNPLSGMLYS 919
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
RK ++ T+L EQ + +H + C QL+KIL D D D+I + LDLEMVEF L +V+V
Sbjct: 920 RKALKNTDLNEEQMKQIHVADNCHHQLNKILADLDQDNITEKSSCLDLEMVEFVLQDVVV 979
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
A++SQV++ KGIR+ E+ M +++YGD IRLQQ+L+DFL +S+ F P GG + +
Sbjct: 980 AAVSQVLIACQGKGIRVSCNLPERFMKQSVYGDGIRLQQILSDFLFVSVKFSPVGGSVEI 1039
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
SS LTK +G ++HL LELR
Sbjct: 1040 SSKLTKKSIGDNLHLIDLELR 1060
>gi|130182|sp|P06594.3|PHYA4_AVESA RecName: Full=Phytochrome A type 4; Short=AP4
gi|16113|emb|CAA27000.1| unnamed protein product [Avena sativa]
Length = 1129
Score = 1438 bits (3723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/1039 (65%), Positives = 841/1039 (80%), Gaps = 10/1039 (0%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
V+AQTT+DA+L+A++E SG SFDYS V QQ RS++V AYL HIQKGKLIQ
Sbjct: 22 VLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVI-AYLQHIQKGKLIQ 80
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
FGC+LALDEK+F VIA+SENAPE+LT V+HAVPSV D P LGIG++++++F+ A+AL
Sbjct: 81 TFGCMLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGATAL 140
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQSY
Sbjct: 141 HKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSY 200
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+++QSLP GSME LC+T+++EVF+LTGYDRVMAYKFHEDDHGEV +EITK GL
Sbjct: 201 KLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFAEITKPGL 260
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRAR +KV++ E LPFD++LCGS LRAPH
Sbjct: 261 EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRAPH 320
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ-----KRKRLWGLVVCHNTTPRFVP 376
SCHLQYMENMNSIASLVMAVVVN+ EE+ + Q ++K+LWGL+VCH+ +PR+VP
Sbjct: 321 SCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQQKKKLWGLLVCHHESPRYVP 380
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSPNI 435
FPLRYACEFLAQVFA+HVN+E ELE Q+ EK+IL+ QT+L DML R+A PL IV+ +PNI
Sbjct: 381 FPLRYACEFLAQVFAVHVNREFELEKQLREKSILKMQTMLSDMLFREASPLTIVSGAPNI 440
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLY K+WRL P + Q+HDI WLS+ H DSTGLS DSL+DAGY GA
Sbjct: 441 MDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPGAS 500
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD++CGMA +I+ KD+IFWFRS TA+E+RWGGAKH+ + DD R+MHPR SFKAFLE
Sbjct: 501 ALGDMICGMAVAKINSKDIIFWFRSHTAAEIRWGGAKHDSSDMDDSRRMHPRLSFKAFLE 560
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVK +SLPW DYEMDAIHSLQLILR D + S+ +++ DLK++G+ EL+AVT
Sbjct: 561 VVKMKSLPWTDYEMDAIHSLQLILRGTLNDASKPKREA-SLDNQIGDLKLDGLAELQAVT 619
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKR 675
SEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVE+SS+ V+R
Sbjct: 620 SEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVPVVQR 679
Query: 676 MLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQK 735
MLYLALQG+EE+ ++FE+KTHG + +D P+ L+VNACASRDLHD+VVGVCFVAQD+T K
Sbjct: 680 MLYLALQGKEEKEVRFEVKTHGPRRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 739
Query: 736 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLL 795
VMDKFTR+EGDYKAI+ NPNPLIPPIFG+DEFGWC EWN AM KLTGW R+EV+DK+LL
Sbjct: 740 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVLDKMLL 799
Query: 796 AEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKL 855
EVF ++ A C LKN+ AFV+L +++N A++G++ EK PFGFF R+GKY ECLL N+K
Sbjct: 800 GEVFDSSNASCPLKNKNAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLSANRKE 859
Query: 856 DREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRK 915
+ G +TGVFCF+ +ASHELQ AL VQ+ SEQT+LKRLKA +Y + I NPLSG+++SRK
Sbjct: 860 NEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGMLYSRK 919
Query: 916 MMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLVAS 973
++ T+L EQ + +H C Q++KIL D D DSI + LDLEM EF +V+VA+
Sbjct: 920 ALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSISEKSSCLDLEMAEFVFQDVVVAA 979
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
+SQV++ KGIRI E+ M +++YGD +RLQQ+L+DFL IS+ F P GG + +SS
Sbjct: 980 VSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQILSDFLFISVKFSPVGGSVEISS 1039
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
LTK+ +G+++HL LELR
Sbjct: 1040 KLTKNSIGENLHLIDLELR 1058
>gi|327241182|gb|AEA40435.1| phytochrome A [Aegilops speltoides]
Length = 1130
Score = 1420 bits (3676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/1041 (65%), Positives = 841/1041 (80%), Gaps = 11/1041 (1%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVS-STAGGDQQPRSDRVTTAYLHHIQKGKL 79
RV+AQTT+DA+L+A+FE S SFDYS V T Q+ RS++V AYL HIQ+GK+
Sbjct: 21 RVLAQTTLDAQLNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVI-AYLQHIQRGKM 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQPFGCLLALDEK+F VIA+SENAPE+LT +HAVPSV D P L IG++++++FT A+
Sbjct: 80 IQPFGCLLALDEKSFNVIAFSENAPEMLTTASHAVPSVDDPPRLDIGTNVRSLFTDQGAT 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPV P E P +AAGALQ
Sbjct: 140 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPASAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++Q+LP GS+E LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 200 SYKLAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI D RAR +KV++DE LPFD++LCGS LRA
Sbjct: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSIKVIEDEALPFDISLCGSALRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLP---QKRKRLWGLVVCHNTTPRF 374
HSCHLQYMENMNSIASLVMAVVVN+ EE+ + + P QK+K LWGLVVCH+ +PR+
Sbjct: 320 AHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCHHESPRY 379
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE E++ Q+ EK+ILR QT+L DML ++A PL IV+ +P
Sbjct: 380 VPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGAP 439
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDL+KCDGAALLY +K+WRLG P +FQ+ D+ WLSE HMDSTGLS +SL+DAGY G
Sbjct: 440 NIMDLIKCDGAALLYGDKVWRLGNAPTEFQIRDLALWLSEVHMDSTGLSTESLHDAGYPG 499
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A ALGD VCGMA +I+ D++FWFRS TA E+RWGGAK++P + DD R+MHPR SFKAF
Sbjct: 500 ASALGDSVCGMAVAKINSSDILFWFRSHTADEIRWGGAKNDPSDVDDSRRMHPRLSFKAF 559
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SL W D EMDAIHSLQLILR A V S+ ++ DLK++G+ EL+A
Sbjct: 560 LEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGV-VKPTGKASLDEQIGDLKLDGLAELQA 618
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVE+SS+ V
Sbjct: 619 VTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVSVV 678
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHG K +D P+ L+ NACASRDLHD+VVGVCFVAQD+T
Sbjct: 679 QRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVGNACASRDLHDDVVGVCFVAQDVTV 738
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDY AI+ NPNPLIPPIFG+DEFGWCCEWN AM KLTGW REEV++K+
Sbjct: 739 HKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHREEVLNKM 798
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF ++ A C LKN++AFV+L +V+N A++G++ EK PFGFF R+GKY +CLL VN+
Sbjct: 799 LLGEVFDSSNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTDCLLSVNR 858
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
+ + G +TGVFCF+ + SHELQQAL VQ+ SEQT+LKRLKA +Y + I NPLSG+++S
Sbjct: 859 RENEGGLITGVFCFIHIPSHELQQALQVQQASEQTSLKRLKAFSYMRHAINNPLSGMLYS 918
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
RK ++ T+L EQ R +H S C QL+KIL D D D+I++ LDLEM EF L +V++
Sbjct: 919 RKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMEKSSCLDLEMAEFVLQDVVL 978
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
A++SQV++ KGIR+ E+ M + +YGD +RLQQ+L+DFLS+S+ F P GG + +
Sbjct: 979 AAVSQVLIACEGKGIRVSCNLPERFMKQLIYGDGVRLQQILSDFLSVSVKFSPVGGSIDI 1038
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
S+ TK+ +G+++HL LELR
Sbjct: 1039 SAKATKNSIGENLHLIDLELR 1059
>gi|327241204|gb|AEA40446.1| phytochrome A type 3 [Triticum aestivum]
Length = 1130
Score = 1419 bits (3673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/1046 (65%), Positives = 842/1046 (80%), Gaps = 21/1046 (2%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVS-STAGGDQQPRSDRVTTAYLHHIQKGKL 79
RV+AQTT+DA+L+A+FE S SFDYS V T Q+ RS++V AYL HIQ+GK+
Sbjct: 21 RVLAQTTLDAQLNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVI-AYLQHIQRGKM 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQ FGCLLALDEK+F VIA+SENAPE+LT V+HAVPSV D P L IG++++++FT A+
Sbjct: 80 IQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTDQGAT 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CK+SGKPFYAIVHR TG L++DFEPV P E P TAAGALQ
Sbjct: 140 ALHKALGFADVSLLNPILVQCKSSGKPFYAIVHRATGCLVVDFEPVNPTEFPATAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++Q+LP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 200 SYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI D RAR +KV++DE LPFD++LCGS LRA
Sbjct: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSIKVIEDEALPFDISLCGSALRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLP---QKRKRLWGLVVCHNTTPRF 374
HSCHLQYMENMNSIASLVMAVVVN+ EE+ + + P QK+K LWGLVVCH+ +PR+
Sbjct: 320 AHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCHHESPRY 379
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE E++ Q+ EK+ILR QT+L DML ++A PL IV+ +P
Sbjct: 380 VPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGAP 439
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDL+KCDGAALLY K+WRLG P + Q+ D+ WLSE HMDSTGLS +SL+DAGY G
Sbjct: 440 NIMDLIKCDGAALLYGGKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLHDAGYPG 499
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A ALGD+VCGMA +I+ D++FWFRS TA E+RWGGAK++P ++DD R+MHPR SFKAF
Sbjct: 500 ASALGDMVCGMAVAKINSNDILFWFRSHTAKEIRWGGAKNDPSDQDDSRRMHPRLSFKAF 559
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK-----SIHSKLCDLKIEGM 608
LEVVK +SL W D EMDAIHSLQLILR GT+D K S+ ++ DLK++G+
Sbjct: 560 LEVVKMKSLAWTDSEMDAIHSLQLILR------GTVDGVVKPTGKASLDEQIGDLKLDGL 613
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL+ VTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVE+S
Sbjct: 614 AELQTVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEES 673
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S+ V+RMLYLALQG+EE+ ++FE+KTHG K +D P+ L+VNACASRDLHD+VVGVCFVA
Sbjct: 674 SVSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVA 733
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T K VMDKFTR+EGDYKAI+ NPNPLIPPIFG+DEFGWCCEWN AM KLTGW +EE
Sbjct: 734 QDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHKEE 793
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECL 848
V+DK+LL EVF + A C LKN++AFV+L V+N A++G++ EK PFGFF R+GKY ECL
Sbjct: 794 VLDKMLLGEVFDSRNASCLLKNKDAFVSLCAVINSALAGKETEKAPFGFFDRSGKYTECL 853
Query: 849 LCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLS 908
L VN++ + +G +TGVFCF+ + SHELQQAL VQ+ SEQ +LKRLKA +Y + I NPLS
Sbjct: 854 LSVNRRQNEDGLITGVFCFIHIPSHELQQALQVQQASEQASLKRLKAFSYMRHAINNPLS 913
Query: 909 GIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTL 966
G+++SRK ++ T+L EQ R +H S C QL+KIL D D D I++ LDLEM EF L
Sbjct: 914 GMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDGIMEKSSCLDLEMAEFVL 973
Query: 967 NEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNG 1026
+V+VA++SQV++ KGIR+ E+ M + +YGD +RLQQ+L+DFLSIS+ F P G
Sbjct: 974 QDVVVAAVSQVLIACEGKGIRVSCNLPERFMKKLIYGDGVRLQQILSDFLSISVKFSPVG 1033
Query: 1027 GQLMVSSSLTKDQLGQSVHLAYLELR 1052
G + +S+ TK+ +G+++HL L+LR
Sbjct: 1034 GSIEISAKATKNSIGENLHLIDLDLR 1059
>gi|77963960|gb|ABB13322.1| phytochrome A [Hordeum vulgare subsp. vulgare]
Length = 1130
Score = 1415 bits (3664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/1041 (65%), Positives = 840/1041 (80%), Gaps = 11/1041 (1%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVS-STAGGDQQPRSDRVTTAYLHHIQKGKL 79
RV+AQTT+DA+L+A+FE S SFDYS V T Q+ RS++V AYL HIQ+GK+
Sbjct: 21 RVLAQTTLDAELNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVI-AYLQHIQRGKM 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQ FGCLLALDEK+F VIA+SENAPE+LT V+HAVPSV D P L IG++++++FT A+
Sbjct: 80 IQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTEQGAT 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPV P E P TAAGALQ
Sbjct: 140 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++Q+LP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 200 SYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI D RAR +KV++DE LPFD++LCGS+LRA
Sbjct: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLCGSSLRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL-----PQKRKRLWGLVVCHNTTPRF 374
HSCHLQYMENMNSIASLVMAVVVN+ EE+ + QK+K LWGLVVCH+ +PR+
Sbjct: 320 AHSCHLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCHHESPRY 379
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE E++ Q+ EK+ILR QT+L DML ++A PL IV+ +P
Sbjct: 380 VPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGTP 439
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDL+KCDGAALLY +K+WRLG P + Q+ I WLSE HMDSTGLS +SL+DAGY G
Sbjct: 440 NIMDLIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLHDAGYPG 499
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A ALGD+VCG+A +I+ D++FWFRS TA E+RWGGAK++P ++DD R+MHPR SFKAF
Sbjct: 500 ASALGDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPRLSFKAF 559
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SL W DYEMDAIHSLQLILR A DV S+ ++ DLK++G+ EL+A
Sbjct: 560 LEVVKMKSLAWSDYEMDAIHSLQLILRGALDDVAK-PTGKASLDEQIGDLKLDGIAELQA 618
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVE+SS+ V
Sbjct: 619 VTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVPVV 678
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++F++KTHG K +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 679 QRMLYLALQGKEEKEVRFDMKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDMTV 738
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR++GDY AIV NPNPLIPPIFG+DEFGWC EWN AM KLTGW REEV+DK+
Sbjct: 739 HKLVMDKFTRVKGDYMAIVHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWHREEVLDKM 798
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF ++ A C LKN++AFV L +++N A++G++ EK PFGFF R+GKY ECLL VN
Sbjct: 799 LLGEVFDSSNASCLLKNKDAFVGLCVLINSALAGEETEKAPFGFFDRSGKYTECLLSVNS 858
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
+ + +G +TGVFCF+ + SHELQQAL VQ+ SEQ +L+RLKA +Y + I NPLSG+++S
Sbjct: 859 RANEDGLITGVFCFIHIPSHELQQALQVQQASEQASLRRLKAFSYMRHAINNPLSGMLYS 918
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY--LDLEMVEFTLNEVLV 971
RK ++ T+L EQ R +H S C QL+KIL D D D+I++ LDLEM EF L +V+V
Sbjct: 919 RKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSCLDLEMAEFVLQDVVV 978
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
A++SQV++ KGIRI E+ M + +YGD IRLQQ+L+DFLSIS+ F P GG + +
Sbjct: 979 AAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSDFLSISVKFSPVGGSVEI 1038
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
S+ TK+ +G+++HL LELR
Sbjct: 1039 SAQATKNSIGENLHLIDLELR 1059
>gi|77963956|gb|ABB13320.1| phytochrome A [Hordeum vulgare subsp. vulgare]
gi|77963958|gb|ABB13321.1| phytochrome A [Hordeum vulgare subsp. vulgare]
Length = 1130
Score = 1411 bits (3653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/1041 (65%), Positives = 840/1041 (80%), Gaps = 11/1041 (1%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVS-STAGGDQQPRSDRVTTAYLHHIQKGKL 79
R++AQTT+DA+L+A+FE S SFDYS V T Q+ RS++V AYL HIQ+GK+
Sbjct: 21 RMLAQTTLDAELNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVI-AYLQHIQRGKM 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQ FGCLLALDEK+F +IA+SENAPE+LT V+HAVPSV D P L IG++++++FT A+
Sbjct: 80 IQSFGCLLALDEKSFNLIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTEQGAT 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPV P E P TAAGALQ
Sbjct: 140 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++Q+LP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 200 SYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI D RAR +KV++DE LPFD++LCGS+LRA
Sbjct: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLCGSSLRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL-----PQKRKRLWGLVVCHNTTPRF 374
HSCHLQYMENMNSIASLVMAVVVN+ EE+ + QK+K LWGLVVCH+ +PR+
Sbjct: 320 AHSCHLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCHHESPRY 379
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE E++ Q+ EK+ILR QT+L DML ++A PL IV+ +P
Sbjct: 380 VPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGTP 439
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDL+KCDGAALLY +K+WRLG P + Q+ I WLSE HMDSTGLS +SL+DAGY G
Sbjct: 440 NIMDLIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLHDAGYPG 499
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A ALGD+VCG+A +I+ D++FWFRS TA E+RWGGAK++P ++DD R+MHPR SFKAF
Sbjct: 500 ASALGDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPRLSFKAF 559
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SL W DYEMDAIHSLQLILR A DV S+ ++ DLK++G+ EL+A
Sbjct: 560 LEVVKMKSLAWSDYEMDAIHSLQLILRGALDDVAK-PTGKASLDEQIGDLKLDGIAELQA 618
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVE+SS+ V
Sbjct: 619 VTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVPVV 678
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++F++KTHG K +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 679 QRMLYLALQGKEEKEVRFDMKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDMTV 738
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR++GDY AIV NPNPLIPPIFG+DEFGWC EWN AM KLTGW REEV+DK+
Sbjct: 739 HKLVMDKFTRVKGDYMAIVHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWHREEVLDKM 798
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF ++ A C LKN++AFV L +++N A++G++ EK PFGFF R+GKY ECLL VN
Sbjct: 799 LLGEVFDSSNASCLLKNKDAFVGLCVLINSALAGEETEKAPFGFFDRSGKYTECLLSVNS 858
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
+ + +G +TGVFCF+ + SHELQQAL VQ+ SEQ +L+RLKA +Y + I NPLSG+++S
Sbjct: 859 RANEDGLITGVFCFIHIPSHELQQALQVQQASEQASLRRLKAFSYMRHAINNPLSGMLYS 918
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY--LDLEMVEFTLNEVLV 971
RK ++ T+L EQ R +H S C QL+KIL D D D+I++ LDLEM EF L +V+V
Sbjct: 919 RKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSCLDLEMAEFVLQDVVV 978
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
A++SQV++ KGIRI E+ M + +YGD +RLQQ+L+DFLSIS+ F P GG + +
Sbjct: 979 AAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPVGGSVEI 1038
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
S+ TK+ +G+++HL LELR
Sbjct: 1039 SAQATKNSIGENLHLIDLELR 1059
>gi|57281883|emb|CAC85512.1| phytochrome A [Triticum aestivum]
Length = 1130
Score = 1409 bits (3648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 675/1041 (64%), Positives = 835/1041 (80%), Gaps = 11/1041 (1%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVS-STAGGDQQPRSDRVTTAYLHHIQKGKL 79
RV+AQTT+DA+L+A+FE S SFDYS V T Q+ RS++V AYL HIQ+GK+
Sbjct: 21 RVLAQTTLDAELNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVI-AYLQHIQRGKM 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQ FGCLLALDEK+F VIA+SENAPE+LT V+HAVPSV D P L IG++++++FT A+
Sbjct: 80 IQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTDQGAA 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPV P E P TAAGALQ
Sbjct: 140 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++Q+LP GSME LC+T+++EVF+LTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 200 SYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVFAEITKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAARFLFMKNKVR+I D RAR +KV++DE LPFD++LCGS LRA
Sbjct: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLCGSALRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLP---QKRKRLWGLVVCHNTTPRF 374
HSCHLQYMENMNSIASLVMAVVVN+ EE+ + + P QK+K LWGL+VCH+ +PR+
Sbjct: 320 AHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCHHESPRY 379
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE E++ Q+ EK+ILR QT+L DML ++A PL IV+ +P
Sbjct: 380 VPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGAP 439
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDL+KCDGAALLY K+WRLG P + Q+ D+ WLSE HMDSTGLS +SL+DAGY G
Sbjct: 440 NIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLHDAGYPG 499
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A ALGD VCGMA +I+ D++FWFRS TA E+RWGGAK++P + DD R+MHPR SFKAF
Sbjct: 500 ASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRLSFKAF 559
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SL W D EMDAIHSLQLILR A V S+ ++ DLK++G+ EL+A
Sbjct: 560 LEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGV-VKPTGKASLDEQIGDLKLDGLAELQA 618
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVE+SS+ V
Sbjct: 619 VTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVSVV 678
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHG K +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 679 QRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDMTV 738
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDY AI+ NPNPLIPPIFG+DE GWCCEWN AM KLTGW REEV+DK+
Sbjct: 739 HKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADESGWCCEWNAAMTKLTGWHREEVLDKM 798
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF + A C LKN++AFV+L +V+N A++G++ EK PFGFF R+GKY ECLL VN+
Sbjct: 799 LLGEVFDSRNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTECLLSVNR 858
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
+ + G +TGVFCF+ + SHELQQAL VQ+ SEQ +LKRLKA +Y + I NPLSG+++S
Sbjct: 859 RQNEGGLITGVFCFIHIPSHELQQALQVQQASEQKSLKRLKAFSYMRHAINNPLSGMLYS 918
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
RK ++ T+L EQ R +H + C QL+KIL D D +I++ LDLEM EF L +V+V
Sbjct: 919 RKALKNTDLNEEQMRQIHVADNCHHQLNKILADLDQHNIMEKSSCLDLEMAEFVLQDVVV 978
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
A++SQV++ KGIR+ E+ M + +YGD +RLQQ+L+DFLSIS+ F P G + +
Sbjct: 979 AAVSQVLIACQGKGIRVSCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPVGSSVEI 1038
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
S+ TK+ +G+++HL LELR
Sbjct: 1039 SAKATKNSIGENLHLIDLELR 1059
>gi|327241172|gb|AEA40430.1| phytochrome A type 1 [Triticum aestivum]
Length = 1130
Score = 1406 bits (3640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/1041 (64%), Positives = 833/1041 (80%), Gaps = 11/1041 (1%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVS-STAGGDQQPRSDRVTTAYLHHIQKGKL 79
RV+AQTT+DA+L+A FE S SFDYS V T Q+ RS++V AYL HIQ+GK+
Sbjct: 21 RVLAQTTLDAELNAGFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVI-AYLQHIQRGKM 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQ FGCLLALDEK+F VIA+S NAPE+LT V+HAVPSV D P L IG++++++FT A+
Sbjct: 80 IQSFGCLLALDEKSFNVIAFSGNAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTDQGAA 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPV P E P TAAGALQ
Sbjct: 140 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++Q+LP GSME LC+T+++EVF+LTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 200 SYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVFAEITKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAARFLFMKNKVR+I D RAR +KV++DE LPFD++LCGS LRA
Sbjct: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLCGSALRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLP---QKRKRLWGLVVCHNTTPRF 374
HSCHLQYMENMNSIASLVMAVVVN+ EE+ + + P QK+K LWGL+VCH+ +PR+
Sbjct: 320 AHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCHHESPRY 379
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE E++ Q+ EK+ILR QT+L DML ++A PL IV+ +P
Sbjct: 380 VPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGAP 439
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDL+KCDGAALLY K+WRLG P + Q+ D+ WLSE HMDSTGLS +SL+DAGY G
Sbjct: 440 NIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLHDAGYPG 499
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A ALGD VCGMA +I+ D++FWFRS TA E+RWGGAK++P + DD R+MHPR SFKAF
Sbjct: 500 ASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRLSFKAF 559
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SL W D EMDAIHSLQLILR A V S+ ++ DLK++G+ EL+A
Sbjct: 560 LEVVKMKSLAWADSEMDAIHSLQLILRGAVDGV-VKPTGKASLDEQIGDLKLDGLAELQA 618
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVE+SS+ V
Sbjct: 619 VTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVSVV 678
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHG K +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 679 QRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDMTV 738
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDY AI+ NPNPLIPPIFG+DE GWCCEWN AM KLTGW REEV+DK+
Sbjct: 739 HKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADESGWCCEWNAAMTKLTGWHREEVLDKM 798
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF + A C LKN++AFV+L +V+N A++G++ EK PFGFF R+GKY ECLL VN+
Sbjct: 799 LLGEVFDSRNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTECLLSVNR 858
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
+ + G +TGVFCF+ + SHELQQAL VQ+ SEQ +LKRLKA +Y + I NPLSG+++S
Sbjct: 859 RQNEGGLITGVFCFIHIPSHELQQALQVQQASEQKSLKRLKAFSYMRHAINNPLSGMLYS 918
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
RK ++ T+L EQ R +H + C QL+KIL D D +I++ LDLEM EF L +V+V
Sbjct: 919 RKALKNTDLNEEQMRQIHVADNCHHQLNKILADLDQHNIMEKSSCLDLEMAEFVLQDVVV 978
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
A++SQV++ KGIR+ E+ M + +YGD +RLQQ+L+DFLSIS+ F P G + +
Sbjct: 979 AAVSQVLIACQGKGIRVSCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPVGSSVEI 1038
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
S+ TK+ +G+++HL LELR
Sbjct: 1039 SAKATKNSIGENLHLIDLELR 1059
>gi|327241174|gb|AEA40431.1| phytochrome A [Triticum monococcum]
Length = 1130
Score = 1402 bits (3630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 673/1041 (64%), Positives = 831/1041 (79%), Gaps = 11/1041 (1%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVS-STAGGDQQPRSDRVTTAYLHHIQKGKL 79
RV+AQTT+DA+L+A+FE S SFDYS V T Q+ RS++V AYL HIQ+GK+
Sbjct: 21 RVLAQTTLDAELNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVI-AYLQHIQRGKM 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQ FGCLLALDEK+F VIA+SENAPE+LT V+HAVPSV D P L IG++++++FT A+
Sbjct: 80 IQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTDQGAT 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPV P E P TAAGALQ
Sbjct: 140 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++Q+LP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 200 SYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI D RAR +KV++DE LPFD++LCGS LRA
Sbjct: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSLKVIEDEALPFDISLCGSALRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLP---QKRKRLWGLVVCHNTTPRF 374
HSCHLQYMENM+SIASLVMAVVVN+ EE+ + + P Q++K LWGL+VCH+ +PR+
Sbjct: 320 AHSCHLQYMENMSSIASLVMAVVVNENEEDDEVGSEQPAQQQQKKILWGLIVCHHESPRY 379
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE E++ Q+ EK+ILR QT+L DML ++A PL IV+ +P
Sbjct: 380 VPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGAP 439
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDL+KCDGAALLY K+WRLG P D Q+HD+ WLSE HMDSTGLS +SL+DAGY G
Sbjct: 440 NIMDLIKCDGAALLYGGKVWRLGTAPTDSQIHDLALWLSEVHMDSTGLSTESLHDAGYPG 499
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A ALGD VCGMA +I+ D++FWFRS TA E+RWGGAK++P + DD R+MHPR SFKAF
Sbjct: 500 ASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRLSFKAF 559
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SL W D EMDAIHSLQLILR A V S+ ++ DLK++G+ EL+A
Sbjct: 560 LEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGV-VKPTGKASLDEQIGDLKLDGLAELQA 618
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVE+SS+ V
Sbjct: 619 VTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVSVV 678
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHG K +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 679 QRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDMTV 738
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDY AI+ NPNPLIPPIFG+DEFGWCCEWN AM KLTGW REEV+DK+
Sbjct: 739 HKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHREEVLDKM 798
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF + A LKN++AF L +V+ A++G++ EK+PFGFF R+GKY ECLL VN+
Sbjct: 799 LLGEVFDSRNASWLLKNKDAFGRLCVVITSALAGEETEKLPFGFFDRSGKYNECLLSVNR 858
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
+ + G +TGVFCF+ + SHELQQAL VQ+ EQ +LKRLKA +Y + I NPLSG+++S
Sbjct: 859 RQNEGGLITGVFCFIHIPSHELQQALQVQQALEQKSLKRLKAFSYMRHAINNPLSGMLYS 918
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
RK ++ T L EQ R +H + C QL+KIL D D + ++ LDLEM EF L +V+V
Sbjct: 919 RKALKNTHLNEEQMRQIHVADNCHHQLNKILADLDQHNTMEKSSCLDLEMAEFVLQDVVV 978
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
A++SQV++ KGIR+ E+ M + +YGD +RLQQ+L+DFLSIS+ F P G + +
Sbjct: 979 AAVSQVLIACQGKGIRVSCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPVGSSVEI 1038
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
S+ TK+ +G+++HL LELR
Sbjct: 1039 SAKATKNSIGENLHLIDLELR 1059
>gi|327241176|gb|AEA40432.1| phytochrome A type 1 [Triticum dicoccoides]
Length = 1130
Score = 1402 bits (3630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 673/1041 (64%), Positives = 833/1041 (80%), Gaps = 11/1041 (1%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVS-STAGGDQQPRSDRVTTAYLHHIQKGKL 79
RV+AQTT+DA+L+A+FE S SFD S V T Q+ RS++V AYL HIQ+GK+
Sbjct: 21 RVLAQTTLDAELNAEFEESSDSFDDSKLVEAQRDTPTVLQEGRSEKVI-AYLQHIQRGKM 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQ FGCLLALDEK+F VIA+SENAPE+LT V+HAVPSV D P L IG++++++FT A+
Sbjct: 80 IQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTDQGAA 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPV P E P TAAGALQ
Sbjct: 140 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++Q+LP GSME LC+T+++EVF+LTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 200 SYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVFAEITKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAARFLFMKNKVR+I D RAR +KV++DE LPFD++LCGS LRA
Sbjct: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLCGSALRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLP---QKRKRLWGLVVCHNTTPRF 374
HSCHLQYMENMNSIASLVMAVVVN+ EE+ + + P QK+K LWGL+VCH+ +PR+
Sbjct: 320 AHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCHHESPRY 379
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE E++ Q+ EK+ILR QT+L DML ++A PL IV+ +P
Sbjct: 380 VPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGAP 439
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDL+KCDGAALLY K+WRLG P + Q+ D+ WLSE HMDSTGLS +SL+DAGY G
Sbjct: 440 NIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLHDAGYPG 499
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A ALGD VCGMA +I+ D++FWFRS TA E+RWGGAK++P + DD R+MHPR SFKAF
Sbjct: 500 ASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRLSFKAF 559
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SL W D EMDAIHSLQLILR A V S+ ++ DLK++G+ EL+A
Sbjct: 560 LEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGV-VKPTGKASLDEQIGDLKLDGLAELQA 618
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVE+SS+ V
Sbjct: 619 VTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVSVV 678
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHG K +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 679 QRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDMTV 738
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDY AI+ NPNPLIPPIFG+DE GWCCEWN AM KLTGW REEV+DK+
Sbjct: 739 HKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADESGWCCEWNAAMTKLTGWHREEVLDKM 798
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF + A LKN++AFV+L +V+N A++G++ EK PFGFF R+GKY ECLL VN+
Sbjct: 799 LLGEVFDSRNASWPLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTECLLSVNR 858
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
+ + G +TGVFCF+ + SHELQQAL VQ+ SEQ +LKRLKA +Y + I NPLSG+++S
Sbjct: 859 RQNEGGLITGVFCFIHIPSHELQQALQVQQASEQKSLKRLKAFSYMRHAINNPLSGMLYS 918
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
RK ++ T+L EQ R +H + C QL+KIL D D +I++ LDLEM EF L +V+V
Sbjct: 919 RKALKNTDLNEEQMRQIHVADNCHHQLNKILADLDQHNIMEKSSCLDLEMAEFVLQDVVV 978
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
A++SQV++ KGIR+ E+ M + +YGD +RLQQ+L+DFLSIS+ F P G + +
Sbjct: 979 AAVSQVLIACQGKGIRVSCNLPERFMKQLVYGDGVRLQQILSDFLSISVKFSPVGSSVEI 1038
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
S+ TK+ +G+++HL LELR
Sbjct: 1039 SAKATKNSIGENLHLIDLELR 1059
>gi|327241206|gb|AEA40447.1| phytochrome A [Amblyopyrum muticum]
Length = 1130
Score = 1379 bits (3570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/1046 (63%), Positives = 827/1046 (79%), Gaps = 21/1046 (2%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVS-STAGGDQQPRSDRVTTAYLHHIQKGKL 79
RV+AQTT+DA+L+ +FE S SFDYS V T Q+ RS+ AYL HIQ+GK
Sbjct: 21 RVLAQTTLDAELNTEFEESNDSFDYSKLVEAQRDTPTVLQEGRSEN-AIAYLQHIQRGKR 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
+Q FGCLLALDEK+F V+A+SENAPE+LT V+HAVP V D P L +G+++ ++FT A+
Sbjct: 80 LQSFGCLLALDEKSFNVVAFSENAPEMLTAVSHAVPGVVDPPRLDMGTNVWSLFTDQGAT 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG ++DFEPV P E P T AGALQ
Sbjct: 140 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCFVVDFEPVNPTEFPATGAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
YKLAAKAI+++Q+LP GSME LC+TM++EVF+L GYDRVMAYKFHED+HGEVV+EITK
Sbjct: 200 PYKLAAKAISKIQALPGGSMELLCNTMVKEVFKLIGYDRVMAYKFHEDNHGEVVAEITKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAAR +FMK KVRMI D R +KV++DE LPFD++LCGS LRA
Sbjct: 260 GLEPYLGLHYPATDIPQAARCVFMKTKVRMICDVHTRSIKVIEDEALPFDISLCGSALRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLP---QKRKRLWGLVVCHNTTPRF 374
H+CHLQYMENM+SIASL MAVVVN+ EE+ + + P Q++K LWGLVVCH+ +PR+
Sbjct: 320 AHNCHLQYMENMSSIASLTMAVVVNENEEDDEVGSEQPAQQQQKKILWGLVVCHHESPRY 379
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE E++ Q+ EK+ILR QT+L ML ++A PL IV+ +P
Sbjct: 380 VPFPLRYACEFLAQVFAVHVNKEFEVQKQLHEKSILRMQTILSGMLFKEASPLTIVSGAP 439
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDL+KCDGAALLY +K+W LG P + Q+ D+ WLSE HMDS GLS +SL+DAGYLG
Sbjct: 440 NIMDLIKCDGAALLYGDKLWHLGNAPTESQIRDLALWLSEVHMDSIGLSTESLHDAGYLG 499
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A ALGD+VCGMA +IS ++FWFRS A E+RWGGAK++P ++DD R+MHPR SFKAF
Sbjct: 500 ASALGDMVCGMAVAKISSNHILFWFRSHIAEEIRWGGAKNDPSDQDDSRRMHPRLSFKAF 559
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK-----SIHSKLCDLKIEGM 608
LEVVK +SL W D EMDAIHSLQLILR GT+D K S+ ++ DLK++G+
Sbjct: 560 LEVVKMKSLAWTDSEMDAIHSLQLILR------GTVDGVVKPTGKASLDEQIGDLKLDGL 613
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL+AVTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVE+S
Sbjct: 614 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEES 673
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S+ V+RMLYLALQG+EE+ ++FE+KTHG K +D P+ L+VNACASRDLHD+VVGVCFVA
Sbjct: 674 SVSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVA 733
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T K VMDKFTR+EGDYKAI+ NPNPLIPPIFG+DEFGWCCEWN AM KLTGW +EE
Sbjct: 734 QDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHKEE 793
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECL 848
V+DK+LL EVF + A C LKN++AFV+L V+N A++G++ EK PFGFF R+GKY ECL
Sbjct: 794 VLDKMLLGEVFDSRNASCLLKNKDAFVSLCAVINSALAGKETEKAPFGFFNRSGKYTECL 853
Query: 849 LCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLS 908
L VN++ + +G +TGVFCF+ + SHELQQAL VQ+ SEQ +LKRLKA +Y + I NPLS
Sbjct: 854 LSVNRRQNEDGLITGVFCFIHIPSHELQQALQVQQASEQASLKRLKAFSYMRHAINNPLS 913
Query: 909 GIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTL 966
G+++SRK ++ T+L EQ R +H S C QL+KIL D D DSI++ LDLEM EF L
Sbjct: 914 GMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDSIMEKSSCLDLEMAEFAL 973
Query: 967 NEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNG 1026
+V+VA++SQV++ KGIR+ E+ M + +YGD +RLQQ+L+DFLSIS+ F P G
Sbjct: 974 QDVVVAAVSQVLIACEGKGIRVSCNLPERFMKKLIYGDGVRLQQILSDFLSISVKFSPVG 1033
Query: 1027 GQLMVSSSLTKDQLGQSVHLAYLELR 1052
G + +S+ TK+ +G+++HL L+LR
Sbjct: 1034 GSIEISAKATKNSIGENLHLIDLDLR 1059
>gi|13429830|dbj|BAB39687.1| phytochrome [Marchantia paleacea subsp. diptera]
Length = 1126
Score = 1365 bits (3533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/1059 (61%), Positives = 815/1059 (76%), Gaps = 13/1059 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
MS+++ SS ++ KS+HS R++ QTT DAKL A FE SG S FDY+ S+ S + G
Sbjct: 1 MSTTKVTYSSGSSAKSKHSVRIV-QTTADAKLQAVFEESGESGDSFDYTKSINASKSTG- 58
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+ + TAYL +Q+G L Q FGC+LA++E TF+V+AYSENAPE+L ++ AVP V
Sbjct: 59 --ESVPAQAVTAYLQRMQRGGLTQTFGCMLAVEELTFRVLAYSENAPEMLDLMPQAVPCV 116
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G VLGIG+D +T+F + SA AL+KA G +VS+ NPI V CK+SGKPFYAIVHR+
Sbjct: 117 GQQDVLGIGTDARTLFNSASAVALEKAAGALDVSMFNPISVQCKSSGKPFYAIVHRIDAG 176
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
L+ID EPV+P + ++AAGALQS+KLAAKAI+RLQSLP G + LCDT+++EV ELTGYD
Sbjct: 177 LVIDIEPVRPSDPSVSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYD 236
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVMAYKFHED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFMKN+VRMI DC A+
Sbjct: 237 RVMAYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCCAQP 296
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN-DEEEEGDNTLPQ 356
V+V+QD++L L+L GSTLRAPH CH QYM NM SIASLVMAV++N ++EE
Sbjct: 297 VQVIQDKELRQPLSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINVNDEEYSSRGYHH 356
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
K ++LWGLVVCH+TTPR VPFPLR ACEFL QVF + +N E+EL Q+ EK ILRTQTLL
Sbjct: 357 KGRKLWGLVVCHHTTPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREKRILRTQTLL 416
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDML+RDAP+GIV+QSPNIMDLVKCDGAAL Y + W LG TP + Q+ DI WL EYH
Sbjct: 417 CDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRYWVLGTTPTELQIKDIADWLLEYHK 476
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH+PD
Sbjct: 477 DSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHDPD 536
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS- 595
+KDDGRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR +F+D+ D DTK+
Sbjct: 537 DKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDID--DSDTKTM 594
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IH++L DLK++GM EL V +EMVRLIETAT PILAVD G +NGWN K+AELTGL V +
Sbjct: 595 IHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVSE 654
Query: 656 AIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+G+ + L + S++TV+R+LYLALQG+EEQN++ +++T+G++ + + LIVNAC+S
Sbjct: 655 AMGRSLVKDLALEESVETVERLLYLALQGEEEQNVEIKLQTYGAQKDKGAVILIVNACSS 714
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RD+ +NVVGVCFV QD+T QK VMDKFTRI+GDYKAIVQNPNPLIPPIFGSDEFG+C EW
Sbjct: 715 RDVTENVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGSDEFGYCSEW 774
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
NPAM KL GWKREEVI K+L+ E+FGT M CCRLK Q+A IVLN AM GQD EK P
Sbjct: 775 NPAMEKLAGWKREEVIGKMLVGEIFGTQMMCCRLKGQDAMTKFMIVLNSAMDGQDSEKFP 834
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF R GK+ E LL NK+ D EGA TGVFCFLQ+AS EL QAL VQR +E+ A +LK
Sbjct: 835 FAFFDRQGKFVEALLTANKRTDSEGAFTGVFCFLQIASMELLQALTVQRATEKVAFSKLK 894
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY +++I+NPL GI+F+R ++E T L EQK+ + TSA C+RQL +ILDD DL+SI D
Sbjct: 895 ELAYIRQEIKNPLYGIMFTRNLVEDTNLTEEQKQFIETSALCERQLRRILDDMDLESIED 954
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
GYL+L+ EF + V+ A ISQ M+ S KG++++ +T + L+GD +RLQQVLAD
Sbjct: 955 GYLELDTAEFIMGTVMDAVISQGMITSREKGLQLIWDTPRDTKNLCLFGDQVRLQQVLAD 1014
Query: 1015 FLSISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL +I F P+ G + + ++ + G VH+ + E R
Sbjct: 1015 FLLNAIRFTPSSEGWVGIKGVSSRHRQGGGVHVVHFEFR 1053
>gi|168042146|ref|XP_001773550.1| phytochrome 4 [Physcomitrella patens subsp. patens]
gi|139001628|dbj|BAF51710.1| phytochrome4 [Physcomitrella patens]
gi|162675089|gb|EDQ61588.1| phytochrome 4 [Physcomitrella patens subsp. patens]
Length = 1126
Score = 1363 bits (3529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/1059 (61%), Positives = 824/1059 (77%), Gaps = 13/1059 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
MS+++ A SS ++ KS+HS RV AQTT DAKL A +E SG S FDYS SV S + G
Sbjct: 1 MSTTKLAYSSGSSVKSKHSVRV-AQTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGE 59
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+ + TAYL +Q+G L+Q FGC+L +DE +F+VIAYSENAPE+L ++ AVPSV
Sbjct: 60 NVPALA---VTAYLQRMQRGGLVQTFGCMLCVDESSFRVIAYSENAPEMLDLMPQAVPSV 116
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G VLGIG+D +T+FT SA+AL+K G +V++LNPI VHC++SGKPFYAI+HR+
Sbjct: 117 GQQEVLGIGTDARTLFTPSSAAALEKCAGAVDVTMLNPISVHCRSSGKPFYAILHRIDVG 176
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
L+IDFEPV+P + +++AGALQS+KLAAKAI+RLQ+LP G + LCDT+++EV +L+GYD
Sbjct: 177 LVIDFEPVRPNDAVVSSAGALQSHKLAAKAISRLQALPGGDIGLLCDTVVEEVRQLSGYD 236
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVMAYKFHED+HGEV++EI +S LEPYLGLHYPATDIPQA+RFLFMKN+VRMI DC A
Sbjct: 237 RVMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMIGDCYAPP 296
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQK 357
VKV+QD+ L ++L GSTLRAPH CH QYM NMNSIASLVMAV+VND +E+ ++ Q+
Sbjct: 297 VKVVQDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNSRGGQQ 356
Query: 358 RKR-LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
R R LWGLVVCH+T+PR V FPLR ACEFL QVF + +N E+EL Q+ EK+ILRTQTLL
Sbjct: 357 RGRKLWGLVVCHHTSPRTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLL 416
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDML+RDAP+GIV+QSPNIMDLVKCDGAAL Y + W LG+TPN+ Q+ +I WL E+H
Sbjct: 417 CDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPNEVQIKEIADWLLEHHQ 476
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL DAGY GA LGD VCGMAA +I+P+D +FWFRS TA E++WGGAKH+PD
Sbjct: 477 DSTGLSTDSLADAGYPGAAQLGDAVCGMAAAKITPRDFLFWFRSHTAKEIKWGGAKHDPD 536
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS- 595
EKDDGRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR +F+D+ D DTK+
Sbjct: 537 EKDDGRKMHPRSSFKAFLEVVKRRSLPWEDIEMDAIHSLQLILRGSFQDID--DSDTKTM 594
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IH++L DLK++GM EL V +EMVRLIETAT PILAVD G +NGWN K+AELTGL V +
Sbjct: 595 IHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVGE 654
Query: 656 AIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+G+ + L+ + SID V+R+LYLALQG+EEQNI+ ++KT G + + LIVNAC+S
Sbjct: 655 AMGRSLVKDLILEESIDVVQRLLYLALQGEEEQNIEIQLKTFGPQKEKGAVILIVNACSS 714
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RD+ DNVVGVCFV QD+T QK V+DKFTRI+GDYKAIVQNPNPLIPPIFG+DE+G+C EW
Sbjct: 715 RDVQDNVVGVCFVGQDVTGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEW 774
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
NP+M KLTGWKREEV+ KLL+ E+FG + CCRLK Q+A I LN AM GQD ++ P
Sbjct: 775 NPSMEKLTGWKREEVLGKLLVGEIFGMQLMCCRLKGQDAMTKFMIALNSAMDGQDTDRFP 834
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF R GKY + LL VNK+ D EG++TGVFCFL S EL QAL VQR +E+ A +LK
Sbjct: 835 FSFFDRQGKYVDALLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRATEKVAFAKLK 894
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY +++I+NPL GI+F+R +ME T+L +Q++ + TSA C+RQL K+LDD DL+SI D
Sbjct: 895 ELAYIRQEIKNPLYGIMFTRNLMEDTDLSEDQRQFVETSAVCERQLRKVLDDMDLESIED 954
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
GYL+L+ EF + V+ A +SQ M+ S KG++++ ET +I + L+GD +RLQQVLAD
Sbjct: 955 GYLELDTNEFVMGTVMDAVVSQGMITSREKGLQLIRETPREIKNMCLFGDQVRLQQVLAD 1014
Query: 1015 FLSISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL ++ F P+ G + + TK +LG +H+ +LE R
Sbjct: 1015 FLLNAVRFTPSSEGWVGIKVVPTKKRLGGGIHVMHLEFR 1053
>gi|25986843|gb|AAM94952.1| phytochrome [Physcomitrella patens]
Length = 1126
Score = 1360 bits (3521), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1059 (61%), Positives = 822/1059 (77%), Gaps = 13/1059 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
MS+++ A SS ++ KS+HS RV AQTT DAKL A +E SG S FDYS SV S + G
Sbjct: 1 MSTTKLAYSSGSSVKSKHSVRV-AQTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGE 59
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+ + TAYL +Q+G L+Q FGC+L +DE +F+VIAYSENAPE+L ++ AVPSV
Sbjct: 60 NVPALA---VTAYLQRMQRGGLVQTFGCMLCVDESSFRVIAYSENAPEMLDLMPQAVPSV 116
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G VLGIG+D +T+FT SA+AL+K G +V++LNPI VHC++SGKPFYAI+HR+
Sbjct: 117 GQQEVLGIGTDARTLFTPSSAAALEKCAGAVDVTMLNPISVHCRSSGKPFYAILHRIDVG 176
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
L+IDFEPV+P + +++AGALQS+KLAAKAI+RLQ+LP G + LCDT+++EV +L+GYD
Sbjct: 177 LVIDFEPVRPNDAVVSSAGALQSHKLAAKAISRLQALPGGDIGLLCDTVVEEVRQLSGYD 236
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVMAYKFHED+HGEV++EI +S LEPYLGLHYPATDIPQA+RFLFMKN+VRMI DC A
Sbjct: 237 RVMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMIGDCYAPP 296
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQK 357
VKV+QD+ L ++L GSTLRAPH CH QYM NMNSIASLVMAV+VND +E+ ++ Q+
Sbjct: 297 VKVVQDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNSRGGQQ 356
Query: 358 RKR-LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
R R LWGLVVCH+T+PR V FPLR ACEFL VF + +N E+EL Q+ EK+ILRTQTLL
Sbjct: 357 RGRKLWGLVVCHHTSPRTVSFPLRSACEFLMLVFGLQLNMEVELAAQLREKHILRTQTLL 416
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDML+RDAP+GIV+QSPNIMDLVKCDGAAL Y + W LG+TPN+ Q+ +I W E+H
Sbjct: 417 CDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPNEVQIKEIADWFLEHHQ 476
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL DAGY GA LGD VCGMAA +I+P+D +FWFRS TA E++WGGAKH+PD
Sbjct: 477 DSTGLSTDSLADAGYPGAAQLGDAVCGMAAAKITPRDFLFWFRSHTAKEIKWGGAKHDPD 536
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS- 595
EKDDGRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI R +F+D+ D DTK+
Sbjct: 537 EKDDGRKMHPRSSFKAFLEVVKRRSLPWEDIEMDAIHSLQLISRGSFQDID--DSDTKTM 594
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IH++L DLK++GM EL V +EMVRLIETAT PILAVD G +NGWN K+AELTGL V +
Sbjct: 595 IHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVGE 654
Query: 656 AIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+G+ + L+ + SID V+R+LYLALQG+EEQNI+ ++KT G + + LIVNAC+S
Sbjct: 655 AMGRSLVKDLILEESIDVVQRLLYLALQGEEEQNIEIQLKTFGPQKEKGAVILIVNACSS 714
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RD+ DNVVGVCFV QD+T QK V+DKFTRI+GDYKAIVQNPNPLIPPIFG+DE+G+C EW
Sbjct: 715 RDVQDNVVGVCFVGQDVTGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEW 774
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
NP+M KLTGWKREEV+ KLL+ E+FG + CCRLK Q+A I LN AM GQD ++ P
Sbjct: 775 NPSMEKLTGWKREEVLGKLLVGEIFGMQLMCCRLKGQDAMTKFMIALNSAMDGQDTDRFP 834
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF R GKY + LL VNK+ D EG++TGVFCFL S EL QAL VQR +E+ A +LK
Sbjct: 835 FSFFDRQGKYVDALLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRATEKVAFAKLK 894
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY +++I+NPL GI+F+R +ME T+L +Q++ + TSA C+RQL K+LDD DL+SI D
Sbjct: 895 ELAYIRQEIKNPLYGIMFTRNLMEDTDLSEDQRQFVETSAVCERQLRKVLDDMDLESIED 954
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
GYL+L+ EF + V+ A +SQ M+ S KG++++ ET +I + L+GD +RLQQVLAD
Sbjct: 955 GYLELDTNEFVMGTVMDAVVSQGMITSREKGLQLIRETPREIKNMCLFGDQVRLQQVLAD 1014
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL ++ F P +GG + + TK +LG +H+ +LE R
Sbjct: 1015 FLLNAVKFTPSSGGWVGIKVVPTKKRLGGGIHVMHLEFR 1053
>gi|168060714|ref|XP_001782339.1| phytochrome 2 [Physcomitrella patens subsp. patens]
gi|139001623|dbj|BAF51708.1| phytochrome2 [Physcomitrella patens]
gi|162666198|gb|EDQ52859.1| phytochrome 2 [Physcomitrella patens subsp. patens]
Length = 1130
Score = 1358 bits (3514), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/1059 (61%), Positives = 820/1059 (77%), Gaps = 13/1059 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
MS+ + A SS ++ KS+HS RV AQTT DAKL A +E SG S FDYS SV S + G
Sbjct: 1 MSTPKLAYSSGSSVKSKHSVRV-AQTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTG- 58
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+ S + TAYL +Q+G L+Q FGC+L ++E F+VIA+SENAPE+L ++ AVPSV
Sbjct: 59 --ENVSAQAVTAYLQRMQRGGLMQTFGCMLCVEESNFRVIAFSENAPEMLDLMPQAVPSV 116
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G VLGIG+D +T+FT SA+AL+K G +V++LNPI VHC++SGKPFYAI+HR+
Sbjct: 117 GQQEVLGIGTDARTLFTPSSAAALEKCAGAVDVTMLNPISVHCRSSGKPFYAILHRIDVG 176
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
L+IDFEPV+ + +++AG LQS+KLAAKAI+RLQ+LP G + LCD ++QEV EL+GYD
Sbjct: 177 LVIDFEPVRSNDAIVSSAGVLQSHKLAAKAISRLQALPGGDIGLLCDIVVQEVRELSGYD 236
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVMAYKFHED+HGEV++EI +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A
Sbjct: 237 RVMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMIGDCFASP 296
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQK 357
VKV+QD+ L ++L GSTLRAPH CH QYM NMNSIASLVMAV+VND +E+ + Q+
Sbjct: 297 VKVIQDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNARGGQQ 356
Query: 358 RKR-LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
R R LWGLVVCH+T+PR V FPLR ACEFL QVF + +N E+EL Q+ EK+ILRTQTLL
Sbjct: 357 RGRKLWGLVVCHHTSPRTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLL 416
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDML+RDAP+GIV+QSPNIMDLVKCDGAAL Y + W LG+TPND Q+ +I WL E+H
Sbjct: 417 CDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPNDAQIKEIADWLLEHHQ 476
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL DAGY GA LGD VCGMAA +I+ KD +FWFRS TA E++WGGAKH+PD
Sbjct: 477 DSTGLSTDSLADAGYPGAAQLGDAVCGMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPD 536
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS- 595
EKDDGRKMHPRSSFKAFL VVK RSLPW+D EMDAIHSLQLILR +F+D+ D DTK+
Sbjct: 537 EKDDGRKMHPRSSFKAFLVVVKRRSLPWEDIEMDAIHSLQLILRGSFQDID--DSDTKTM 594
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IH++L DLK++GM EL V +EMVRLIETAT PILAVD G +NGWN K+AELTGL V++
Sbjct: 595 IHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSGGFINGWNAKVAELTGLPVEE 654
Query: 656 AIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+G+ + L+ + SID V+R+L+LALQG EEQNI+ ++KT G + + LIVNAC+S
Sbjct: 655 AMGRSLVKDLILNESIDVVQRLLHLALQGDEEQNIEIQLKTFGPQKEKGAVILIVNACSS 714
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RD+ DNVVGVCFV QD+T QK V+DKFTRI+GDYKAIVQNPNPLIPPIFG+DE+G+C EW
Sbjct: 715 RDVQDNVVGVCFVGQDVTGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEW 774
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
NP+M KLTGWKREEVI KLL+ E+FG + CCRLK+Q+A IVLN AM GQD ++ P
Sbjct: 775 NPSMEKLTGWKREEVIGKLLVGEIFGIQLMCCRLKSQDAMTKFMIVLNGAMDGQDTDRFP 834
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF R GKY + LL VNK+ D EG++TGVFCFL S EL QAL VQR +E+ A +LK
Sbjct: 835 FSFFDRQGKYVDPLLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRSTEKVAFAKLK 894
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY +++I+NPL GI+F+R +ME T+L +Q++ + TSA C+RQL KILDD DL+SI D
Sbjct: 895 ELAYIRQEIKNPLYGIVFTRNLMEDTDLSVDQRQFVETSAVCERQLRKILDDLDLESIED 954
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
GYL+L+ EF + V+ A +SQ M+ S KG++++ ET +I + LYGD +RLQQVLAD
Sbjct: 955 GYLELDTTEFEMGTVMDAVVSQGMITSREKGLQLIRETPSEIKNMCLYGDQVRLQQVLAD 1014
Query: 1015 FLSISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL ++ F P+ G + + TK +LG+ VH+ +LE R
Sbjct: 1015 FLLNAVRFTPSSEGWVGIKVVPTKKRLGRGVHVMHLEFR 1053
>gi|25986847|gb|AAM94954.1| phytochrome [Physcomitrella patens]
Length = 1130
Score = 1354 bits (3505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 653/1059 (61%), Positives = 820/1059 (77%), Gaps = 13/1059 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
MS+ + A SS ++ KS+HS RV AQTT DAKL A +E SG S FDYS SV S + G
Sbjct: 1 MSTPKLAYSSGSSVKSKHSVRV-AQTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTG- 58
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+ S + TAYL +Q+G L+Q FGC+L ++E F+VIA+SENAPE+L ++ AVPSV
Sbjct: 59 --ENVSAQAVTAYLQRMQRGGLMQTFGCMLCVEESNFRVIAFSENAPEMLDLMPQAVPSV 116
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G VLGIG+D +T+FT SA+AL+K G +V++LNPI VHC++SGKPFYAI+HR+
Sbjct: 117 GQQEVLGIGTDARTLFTPSSAAALEKCAGTVDVTMLNPISVHCRSSGKPFYAILHRIDVG 176
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
L+IDFEPV+ + +++AG LQS+KLAAKAI+RLQ+LP G + LCD ++QEV EL+GYD
Sbjct: 177 LVIDFEPVRSNDAIVSSAGVLQSHKLAAKAISRLQALPGGDIGLLCDIVVQEVRELSGYD 236
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVMAYKFHED+HGEV++EI +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A
Sbjct: 237 RVMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMIGDCFASP 296
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQK 357
VKV+QD+ L ++L GSTLRAPH CH QYM NMNSIASLVMAV+VND +E+ + Q+
Sbjct: 297 VKVIQDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNARGGQQ 356
Query: 358 RKR-LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
R R LWGLVVCH+T+PR V FPLR ACEFL QVF + +N E+EL Q+ EK+ILRTQTLL
Sbjct: 357 RGRKLWGLVVCHHTSPRTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLL 416
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDML+RDAP+GIV+QSPNIMDLVKCDGAAL Y + W LG+TPND Q+ +I WL E+H
Sbjct: 417 CDMLLRDAPIGIVSQSPNIMDLVKCDGAALHYGKRFWLLGITPNDAQIKEIADWLLEHHQ 476
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL DAGY GA LGD VCGMAA +I+ KD +FWFRS TA E++WGGAKH+PD
Sbjct: 477 DSTGLSTDSLADAGYPGAAQLGDAVCGMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPD 536
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS- 595
EKDDGRKMHPRSSFKAFL VVK RSLPW+D EMDAIHSLQLILR +F+D+ D DTK+
Sbjct: 537 EKDDGRKMHPRSSFKAFLVVVKRRSLPWEDIEMDAIHSLQLILRGSFQDID--DSDTKTM 594
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IH++L DLK++ M EL V +EMVRLIETAT PILAVD G +NGWN K+AELTGL V++
Sbjct: 595 IHARLNDLKLQDMDELSTVANEMVRLIETATAPILAVDSGGFINGWNAKVAELTGLPVEE 654
Query: 656 AIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+G+ + L+ + SID V+R+L+LALQG EEQNI+ ++KT G + + LIVNAC+S
Sbjct: 655 AMGRSLVKDLILNESIDVVQRLLHLALQGDEEQNIEIQLKTFGPQKEKGAVILIVNACSS 714
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RD+ DNVVGVCFV QD+T QK V+DKFTRI+GDYKAIVQNPNPLIPPIFG+DE+G+C EW
Sbjct: 715 RDVQDNVVGVCFVGQDVTGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEW 774
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
NP+M KLTGWKREEVI KLL+ E+FG + CCRLK+Q+A IVLN AM GQD ++ P
Sbjct: 775 NPSMEKLTGWKREEVIGKLLVGEIFGIQLMCCRLKSQDAMTKFMIVLNGAMDGQDTDRFP 834
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF R GKY + LL VNK+ D EG++TGVFCFL S EL QAL VQR +E+ A +LK
Sbjct: 835 FSFFDRQGKYVDPLLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRSTEKVAFAKLK 894
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY +++I+NPL GI+F+R +ME T+L +Q++L+ TSA C+RQL KILDD DL+SI D
Sbjct: 895 ELAYIRQEIKNPLYGIVFTRNLMEDTDLSVDQRQLVETSAVCERQLRKILDDLDLESIED 954
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
GYL+L+ EF + V+ A +SQ M+ S KG++++ ET +I + LYGD +RLQQVLAD
Sbjct: 955 GYLELDTTEFEMGTVMDAVVSQGMITSREKGLQLIRETPSEIKNMCLYGDQVRLQQVLAD 1014
Query: 1015 FLSISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL ++ F P+ G + + TK +LG+ VH+ ++E R
Sbjct: 1015 FLLNAVRFTPSSEGWVGIKVVPTKKRLGRGVHVMHVEFR 1053
>gi|326489438|dbj|BAK01700.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1089
Score = 1352 bits (3498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/977 (65%), Positives = 794/977 (81%), Gaps = 9/977 (0%)
Query: 84 GCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQK 143
GCLLALDEK+F VIA+SENAPE+LT V+HAVPSV D P L IG++++++FT A+AL K
Sbjct: 43 GCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTEQGATALHK 102
Query: 144 ALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKL 203
ALGF +VSLLNP LV CKTSGKPFYAIVHR TG L++DFEPV P E P TAAGALQSYKL
Sbjct: 103 ALGFADVSLLNPFLVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATAAGALQSYKL 162
Query: 204 AAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEP 263
AAKAI+++Q+LP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK GLEP
Sbjct: 163 AAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKPGLEP 222
Query: 264 YLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSC 323
YLGLHYPATDIPQAARFLFMKNKVRMI D RAR +KV++DE LPFD++LCGS+LRA HSC
Sbjct: 223 YLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLCGSSLRAAHSC 282
Query: 324 HLQYMENMNSIASLVMAVVVNDEEEEGDNTL-----PQKRKRLWGLVVCHNTTPRFVPFP 378
HLQYMENMNSIASLVMAVVVN+ EE+ + QK+K LWGLVVCH+ +PR+VPFP
Sbjct: 283 HLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCHHESPRYVPFP 342
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSPNIMD 437
LRYACEFLAQVFA+HVNKE E++ Q+ EK+ILR QT+L DML ++A PL IV+ +PNIMD
Sbjct: 343 LRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGTPNIMD 402
Query: 438 LVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALAL 497
L+KCDGAALLY +K+WRLG P + Q+ I WLSE HMDSTGLS +SL+DAGY GA AL
Sbjct: 403 LIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLHDAGYPGASAL 462
Query: 498 GDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVV 557
GD+VCG+A +I+ D++FWFRS TA E+RWGGAK++P ++DD R+MHPR SFKAFLEVV
Sbjct: 463 GDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPRLSFKAFLEVV 522
Query: 558 KTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSE 617
K +SL W DYEMDAIHSLQLILR A DV S+ ++ DLK++G+ EL+AVTSE
Sbjct: 523 KMKSLAWSDYEMDAIHSLQLILRGALDDVAK-PTGKASLDEQIGDLKLDGIAELQAVTSE 581
Query: 618 MVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRML 677
MVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVE+SS+ V+RML
Sbjct: 582 MVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVPVVQRML 641
Query: 678 YLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTV 737
YLALQG+EE+ ++F++KTHG K +D P+ L+VNACASRDLHD+VVGVCFVAQD+T K V
Sbjct: 642 YLALQGKEEKEVRFDMKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDMTVHKLV 701
Query: 738 MDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAE 797
MDKFTR++GDY AIV NPNPLIPPIFG+DEFGWC EWN AM KLTGW REEV+DK+LL E
Sbjct: 702 MDKFTRVKGDYMAIVHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWHREEVLDKMLLGE 761
Query: 798 VFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDR 857
VF ++ A C LKN++AFV L +++N A++G++ EK PFGFF R+GKY ECLL VN + +
Sbjct: 762 VFDSSNASCLLKNKDAFVGLCVLINSALAGEETEKAPFGFFDRSGKYTECLLSVNSRANE 821
Query: 858 EGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMM 917
+G +TGVFCF+ + SHELQQAL VQ+ SEQ +L+RLKA +Y + I NPLSG+++SRK +
Sbjct: 822 DGLITGVFCFIHIPSHELQQALQVQQASEQASLRRLKAFSYMRHAINNPLSGMLYSRKAL 881
Query: 918 EGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY--LDLEMVEFTLNEVLVASIS 975
+ T+L EQ R +H S C QL+KIL D D D+I++ LDLEM EF L +V+VA++S
Sbjct: 882 KNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSCLDLEMAEFVLQDVVVAAVS 941
Query: 976 QVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSL 1035
QV++ KGIRI E+ M + +YGD IRLQQ+L+DFLSIS+ F P GG + +S+
Sbjct: 942 QVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSDFLSISVKFSPVGGSVEISAQA 1001
Query: 1036 TKDQLGQSVHLAYLELR 1052
TK+ +G+++HL LELR
Sbjct: 1002 TKNSIGENLHLIDLELR 1018
>gi|302818893|ref|XP_002991119.1| hypothetical protein SELMODRAFT_161430 [Selaginella moellendorffii]
gi|300141213|gb|EFJ07927.1| hypothetical protein SELMODRAFT_161430 [Selaginella moellendorffii]
Length = 1143
Score = 1344 bits (3478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/1071 (60%), Positives = 818/1071 (76%), Gaps = 25/1071 (2%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
MS+++ SS ++ KS+HS RV AQTT DAKLHA +E SG S FDY+ SV + + G
Sbjct: 1 MSTTKLTYSSGSSAKSKHSVRV-AQTTADAKLHAVYEESGESGDSFDYTKSVNATKSTG- 58
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+ + TAYL +Q+G L+QPFGC+LA++E +F+VIA+S+NA E+L ++ +VPS+
Sbjct: 59 --ESIPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSL 116
Query: 118 G--DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
G +LGIGSD +++FT SASAL+KA G +VS+LNPI VHCKTS KPFYAIVHR+
Sbjct: 117 GAGQQDLLGIGSDARSLFTPASASALEKAAGAIDVSMLNPISVHCKTSAKPFYAIVHRID 176
Query: 176 GSLIIDFEPVKPYEVPM-TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELT 234
L++D EPVK + + +AAGALQS+KLAAKAI+RLQSLP G + LCDT+++EV ELT
Sbjct: 177 VGLVLDLEPVKASDTSVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELT 236
Query: 235 GYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 294
GYDRVMAYKFH+D+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFMKN+VRMI DC
Sbjct: 237 GYDRVMAYKFHDDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCS 296
Query: 295 ARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE----- 349
A VK+ QD+ L ++L GSTLRAPH CH QYM NM S+ASLVMAV++ND ++E
Sbjct: 297 AAPVKISQDKDLRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAVIINDNDDEYRSSS 356
Query: 350 -----GDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQI 404
G QK ++LWG+VVCH+T+PR VPFPLR ACEFL QVF + +N E+EL Q+
Sbjct: 357 GGGGGGGGAYQQKGRKLWGMVVCHHTSPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQL 416
Query: 405 LEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQL 464
EK+ILRTQTLLCDML+RDAP+GIV+QSPNIMDLVKCDGAAL Y + W LGVTP++ Q+
Sbjct: 417 REKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGVTPSEAQI 476
Query: 465 HDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTAS 524
DI WL E+H DSTGLS DSL DAGY GA +LGD VCGMAA +I+ KD +FWFRS TA
Sbjct: 477 KDIADWLLEHHKDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAK 536
Query: 525 EVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK 584
E++WGGAKH+PD+KDDGRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR +F
Sbjct: 537 EIKWGGAKHDPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFH 596
Query: 585 DVGTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNT 643
D+ D DTK+ IH++L DLK++GM EL V +EMVRLIETAT PILAVD G +NGWN
Sbjct: 597 DID--DSDTKTMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNA 654
Query: 644 KIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKIND 702
K+AELTGL V +A+G+ LV S D V+R+LYLALQG EEQN++ ++KT G + +
Sbjct: 655 KVAELTGLPVTEAMGRSLAKDLVLQESADMVERLLYLALQGDEEQNVELKLKTFGVQKDK 714
Query: 703 DPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPI 762
+ + L+VNACASRD+ DNVVGVCFV QD+T QK VMDKFTRI+GDYKAIVQNPNPLIPPI
Sbjct: 715 EAVILVVNACASRDVSDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPI 774
Query: 763 FGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLN 822
FG+DEFG+C EWNPAM KL+GWKREEV+ K+L+ E+FG M CRLK Q+A IVLN
Sbjct: 775 FGADEFGYCSEWNPAMEKLSGWKREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLN 834
Query: 823 KAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQ 882
A GQD EK PF FF R GKY E LL K+ D EG++TGVFCFL +AS ELQQAL VQ
Sbjct: 835 SAADGQDTEKFPFAFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQ 894
Query: 883 RLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHK 942
R +E+ AL +LK LAY +++I+NPL GI+F+R +ME T+L +QK+ + T A C++Q+ K
Sbjct: 895 RATEKVALSKLKELAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRK 954
Query: 943 ILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLY 1002
ILDD DL+SI DGYL+L+ EF + V+ A ISQ M+ S K ++++ ET ++I + LY
Sbjct: 955 ILDDMDLESIEDGYLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLY 1014
Query: 1003 GDSIRLQQVLADFLSISINFVPNGGQLM-VSSSLTKDQLGQSVHLAYLELR 1052
GD +RLQQVLADFL +I F P+ + + + ++ +LG VH+ +LE R
Sbjct: 1015 GDQVRLQQVLADFLLNAIRFTPSSENWVGIKVATSRKRLGGGVHVMHLEFR 1065
>gi|302819945|ref|XP_002991641.1| hypothetical protein SELMODRAFT_161807 [Selaginella moellendorffii]
gi|300140490|gb|EFJ07212.1| hypothetical protein SELMODRAFT_161807 [Selaginella moellendorffii]
Length = 1142
Score = 1342 bits (3474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1070 (60%), Positives = 818/1070 (76%), Gaps = 24/1070 (2%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
MS+++ SS ++ KS+HS RV AQTT DAKLHA +E SG S FDY+ SV + + G
Sbjct: 1 MSTTKLTYSSGSSAKSKHSVRV-AQTTADAKLHAVYEESGESGDSFDYTKSVNATKSTG- 58
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+ + TAYL +Q+G L+QPFGC+LA++E +F+VIA+S+NA E+L ++ +VPS+
Sbjct: 59 --ESIPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSL 116
Query: 118 G--DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
G +LGIGSD +++FT SASAL+KA G +VS+LNPI VHCKTS KPFYAIVHR+
Sbjct: 117 GAGQQDLLGIGSDARSLFTPASASALEKAAGAIDVSMLNPISVHCKTSAKPFYAIVHRID 176
Query: 176 GSLIIDFEPVKPYEVPM-TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELT 234
L++D EPVK + + +AAGALQS+KLAAKAI+RLQSLP G + LCDT+++EV ELT
Sbjct: 177 VGLVLDLEPVKASDTSVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELT 236
Query: 235 GYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 294
GYDRVMAYKFH+D+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFMKN+VRMI DC
Sbjct: 237 GYDRVMAYKFHDDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCS 296
Query: 295 ARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE----- 349
A VK+ QD+ L ++L GSTLRAPH CH QYM NM S+ASLVMAV++ND ++E
Sbjct: 297 AAPVKISQDKDLRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAVIINDNDDEYRSSS 356
Query: 350 ----GDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQIL 405
G QK ++LWG+VVCH+T+PR VPFPLR ACEFL QVF + +N E+EL Q+
Sbjct: 357 GGGGGGGAYQQKGRKLWGMVVCHHTSPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLR 416
Query: 406 EKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLH 465
EK+ILRTQTLLCDML+RDAP+GIV+QSPNIMDLVKC+GAAL Y + W LGVTP++ Q+
Sbjct: 417 EKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVKCNGAALYYGKRFWLLGVTPSEAQIK 476
Query: 466 DIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASE 525
DI WL E+H DSTGLS DSL DAGY GA +LGD VCGMAA +I+ KD +FWFRS TA E
Sbjct: 477 DIADWLLEHHKDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKE 536
Query: 526 VRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD 585
++WGGAKH+PD+KDDGRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR +F D
Sbjct: 537 IKWGGAKHDPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFHD 596
Query: 586 VGTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTK 644
+ D DTK+ IH++L DLK++GM EL V +EMVRLIETAT PILAVD G +NGWN K
Sbjct: 597 ID--DSDTKTMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAK 654
Query: 645 IAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDD 703
+AELTGL V +A+G+ LV S D V+R+LYLALQG EEQN++ ++KT G + + +
Sbjct: 655 VAELTGLPVTEAMGRSLAKDLVLQESADMVERLLYLALQGDEEQNVELKLKTFGVQKDKE 714
Query: 704 PITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIF 763
+ L+VNACASRD+ DNVVGVCFV QD+T QK VMDKFTRI+GDYKAIVQNPNPLIPPIF
Sbjct: 715 AVILVVNACASRDVSDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIF 774
Query: 764 GSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNK 823
G+DEFG+C EWNPAM KL+GWKREEV+ K+L+ E+FG M CRLK Q+A IVLN
Sbjct: 775 GADEFGYCSEWNPAMEKLSGWKREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNS 834
Query: 824 AMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQR 883
A GQD EK PF FF R GKY E LL K+ D EG++TGVFCFL +AS ELQQAL VQR
Sbjct: 835 AADGQDTEKFPFAFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQR 894
Query: 884 LSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKI 943
+E+ AL +LK LAY +++I+NPL GI+F+R +ME T+L +QK+ + T A C++Q+ KI
Sbjct: 895 ATEKVALSKLKELAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKI 954
Query: 944 LDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYG 1003
LDD DL+SI DGYL+L+ EF + V+ A ISQ M+ S K ++++ ET ++I + LYG
Sbjct: 955 LDDMDLESIEDGYLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYG 1014
Query: 1004 DSIRLQQVLADFLSISINFVPNGGQLM-VSSSLTKDQLGQSVHLAYLELR 1052
D +RLQQVLADFL +I F P+ + + + ++ +LG VH+ +LE R
Sbjct: 1015 DQVRLQQVLADFLLNAIRFTPSSENWVGIKVATSRKRLGGGVHVMHLEFR 1064
>gi|3724346|dbj|BAA33775.1| phytochrome 2 [Adiantum capillus-veneris]
Length = 1140
Score = 1322 bits (3422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/1066 (60%), Positives = 820/1066 (76%), Gaps = 19/1066 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVI-AQTTIDAKLHADFE-------TSGTSFDYSNSVR-VS 52
S++ P SSS+ S+H+ RV+ AQTT DAKLHA FE T G+SFDY S+
Sbjct: 11 SAAEPRSSSSSVVGSKHNRRVVVAQTTADAKLHAVFEQAQSEGDTGGSSFDYMRSIEDAR 70
Query: 53 STAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNH 112
+ ++ P + TAYL +Q+G LIQPFGC+LAL+E +F+VIAYSENA E+L ++
Sbjct: 71 GSVLSERVPA--QAVTAYLQRMQRGGLIQPFGCMLALEEGSFRVIAYSENAAEMLDLMPQ 128
Query: 113 AVPSVGDHP-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIV 171
+VPSVG VLGIG+D +T+FT SA+AL+KA G +VS+LNPI VHC++S KPF AIV
Sbjct: 129 SVPSVGVQVLVLGIGTDARTLFTYASAAALEKASGAVDVSMLNPITVHCRSSSKPFNAIV 188
Query: 172 HRVTGSLIIDFEPVKPYEVPM-TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEV 230
HR+ L+IDFEPV+P +V + AAGALQS+KLAAKAI+RLQ+LP G ++ LCD++++EV
Sbjct: 189 HRIDVGLVIDFEPVRPADVAVWAAAGALQSHKLAAKAISRLQALPVGDIDLLCDSVVEEV 248
Query: 231 FELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMI 290
ELTGYDRVMAYKFHED+HGEV++EI +S LEPYLGLHYPATDIPQA+RFLFMKN+VRMI
Sbjct: 249 RELTGYDRVMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMI 308
Query: 291 VDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG 350
DCRA V+V+QD++L L+L GSTLRAPH CH QYM NM SIASLVMAVVVND +E+
Sbjct: 309 CDCRALPVRVIQDKELRQPLSLAGSTLRAPHGCHSQYMANMGSIASLVMAVVVNDNDEDV 368
Query: 351 DNTLPQ-KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNI 409
N Q K +RLWGLVVCH+TTPR VPF LR ACEFL QVF + +N ELEL Q+ EK+I
Sbjct: 369 SNRSQQPKMRRLWGLVVCHHTTPRAVPFALRSACEFLMQVFGLQLNMELELAAQMREKHI 428
Query: 410 LRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVS 469
LRTQTLLCDML+RDAP+GIV++SPNIMDLVKCDGAAL Y W LG TP + Q+ D+
Sbjct: 429 LRTQTLLCDMLLRDAPIGIVSESPNIMDLVKCDGAALYYGKNFWLLGTTPIEAQIKDLAE 488
Query: 470 WLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWG 529
WL + H DSTGLS DSL DAGY GA ALGD VCGMAA +I+ +D +FWFRS TA E++WG
Sbjct: 489 WLLDVHRDSTGLSTDSLADAGYPGAAALGDAVCGMAAAKITTRDFLFWFRSHTAKEIKWG 548
Query: 530 GAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTL 589
GAKH+P+++DDGRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR +F+D+
Sbjct: 549 GAKHDPEDRDDGRKMHPRSSFKAFLEVVKRRSLPWEDMEMDAIHSLQLILRGSFQDID-- 606
Query: 590 DLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
D DTK+ IH++L DLK+ GM EL V +EMVRLIETAT PI AVD G +NGWN K+AEL
Sbjct: 607 DSDTKTMIHARLNDLKLHGMDELSTVANEMVRLIETATAPIFAVDAGGFINGWNAKVAEL 666
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGL+V++A+ + + +V ++S++T +R+L LALQGQEEQN++ ++KT+G + P+ L
Sbjct: 667 TGLTVEEAMSRSLVRDVVVNASMETAERVLDLALQGQEEQNVEIKLKTYGDQAIKGPVIL 726
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
IVNAC+SRD DNVVGVCFV QD+T QK VMDKFTRI+GDYK IVQNPNPLIPPIFG+DE
Sbjct: 727 IVNACSSRDFTDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKTIVQNPNPLIPPIFGADE 786
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
FG+C EWNPAM K +GWKRE+VI K+L+ EVFG+++ACC+L+ Q++ I+LN AM G
Sbjct: 787 FGYCSEWNPAMEKFSGWKREDVIGKMLIGEVFGSDLACCKLRGQDSMTKFMIILNAAMGG 846
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
+D ++ PFGFF R GKYAE LL NK+ D +GA+TGVFCFL AS ELQQAL VQ+ S +
Sbjct: 847 RDSDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSAR 906
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
TAL RLK +AY K++IRNPL GI+F+RK+++ T L EQK+++ TS+ C++QL ILD+
Sbjct: 907 TALDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDED 966
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
+ + + G +DL+ +EFT+ V+ A ISQ M++S KG++++ ET +I + L+GD R
Sbjct: 967 NFEKLDQGNVDLDTLEFTMGTVMDAVISQGMIRSREKGLQLIRETHVEIKNTRLFGDQYR 1026
Query: 1008 LQQVLADFLSISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
LQQVLADFL+ +I F + G + + T + +H+ + E R
Sbjct: 1027 LQQVLADFLTTAIRFTSSSDGWVGIKVVPTIKNMKDGLHIVHFEFR 1072
>gi|2499556|sp|Q40762.1|PHY_PICAB RecName: Full=Phytochrome
gi|1399958|gb|AAB03339.1| phytochrome [Picea abies]
Length = 1136
Score = 1320 bits (3417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1073 (60%), Positives = 821/1073 (76%), Gaps = 27/1073 (2%)
Query: 1 MSSSRPAQSS------SNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSST 54
MS++RP ++ S + S+HSARVI QT +DAKL A+FE S SFDY+ S+ +S
Sbjct: 1 MSTTRPRAATHSASSGSVSRSSKHSARVITQTPVDAKLQAEFEGSVHSFDYTKSIDISGD 60
Query: 55 AGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVN--H 112
+ AYL +QK LIQPFGC+LA++E + V+ YSENAPE+L +V H
Sbjct: 61 S----SSVPSETVKAYLQRLQKEMLIQPFGCVLAVEEGSCAVVGYSENAPEMLDVVGGAH 116
Query: 113 AVPSVGDHP---------VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTS 163
AVPS+G +L IG D +T+F SA+ALQKA F ++ L+NPI V C S
Sbjct: 117 AVPSIGGQQQEGGGGGGGLLRIGMDARTLFKPASAAALQKAATFADMHLVNPIFVRCNRS 176
Query: 164 GKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLC 223
GKPFYAI++R+ L+IDFEPV P +VP++AAGALQSYKLAAKAI+RLQSLP G + LC
Sbjct: 177 GKPFYAILNRIDAGLVIDFEPVMPSDVPVSAAGALQSYKLAAKAISRLQSLPGGDIRLLC 236
Query: 224 DTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFM 283
DT++QEV ELTGYDRVMAY+FHED+HGEVV+E+ + LEPYLGLHYPATDIPQA+RFLFM
Sbjct: 237 DTVVQEVRELTGYDRVMAYRFHEDEHGEVVAEMRRPDLEPYLGLHYPATDIPQASRFLFM 296
Query: 284 KNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 343
KN+VRMI DC A V V+QD++L L+LCGSTLRAPH CH QYM NM SIASLVM+V
Sbjct: 297 KNRVRMICDCCAPPVNVIQDKRLRQPLSLCGSTLRAPHGCHAQYMANMGSIASLVMSVTT 356
Query: 344 N---DEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
N D+ E G PQ R++LWGLVVCH+T+PR +PFPLRYACEFL QVF I +NKE+EL
Sbjct: 357 NENGDDSEGGGQQQPQNRRKLWGLVVCHHTSPRVIPFPLRYACEFLMQVFGIQLNKEVEL 416
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
Q+ EK+ILR Q +LCDML+RDAP+GIV+Q+PNIMDLVKCDGAALLY ++W LG TP
Sbjct: 417 AAQLREKHILRVQPVLCDMLLRDAPVGIVSQTPNIMDLVKCDGAALLYGKRLWLLGTTPT 476
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
+ Q+ DI WL E+H DSTGLS DSL +AGY GA +LGD VCG+AA RI+ KD +FWFRS
Sbjct: 477 EAQILDIADWLLEHHRDSTGLSTDSLAEAGYPGAASLGDAVCGIAAARITSKDFLFWFRS 536
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA E+ WGGAKH+P++KDDGR+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 537 HTAKEIIWGGAKHDPNDKDDGRRMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILR 596
Query: 581 NAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
++F D+ D D+K+ IH++L DL+++G+ EL AVT+EMVRLIETATVPILA+D +GLVN
Sbjct: 597 DSFHDID--DSDSKTMIHARLNDLRLQGIDELSAVTNEMVRLIETATVPILAIDSNGLVN 654
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWNTK AELTGL D+ IG+ + LV+ S++ VK+MLYLALQG+EEQN++ ++KT G +
Sbjct: 655 GWNTKAAELTGLLADEVIGRPLIDLVQHDSVEIVKKMLYLALQGEEEQNVEIKLKTFGIQ 714
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
P+ LIVNAC+SRDL +NVVGVCFVAQD+T Q+ MDKFT ++GDY+AIVQNPNPLI
Sbjct: 715 EEKGPVVLIVNACSSRDLEENVVGVCFVAQDVTWQRIAMDKFTHLQGDYRAIVQNPNPLI 774
Query: 760 PPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGI 819
PPIFG+DE+G+C EWNPAM KLTGWKREEVI K+L+ EVFG + C+LK Q+ L I
Sbjct: 775 PPIFGADEYGYCSEWNPAMEKLTGWKREEVIGKMLVGEVFGIHRMSCQLKGQDGLTKLRI 834
Query: 820 VLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQAL 879
VLN AM+G++ EK PF FF R+GK E LL NK+ D EG +TGVFCFL + S ELQQAL
Sbjct: 835 VLNNAMAGKETEKFPFSFFDRHGKNTEALLSANKRTDAEGIITGVFCFLHVTSTELQQAL 894
Query: 880 HVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQ 939
VQR++EQ A+ RLK LAY +++IRNPL GIIF+RK+ME T+L EQK+++ TSA CQRQ
Sbjct: 895 QVQRMAEQAAMDRLKELAYIRQEIRNPLYGIIFTRKLMESTDLSEEQKQIVQTSALCQRQ 954
Query: 940 LHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSE 999
L K+LDD+DL+SI DGYL+L+ +EFTL VL A +SQ M+ S KG++++ ++ E+I +
Sbjct: 955 LVKVLDDADLESIEDGYLELDTIEFTLGTVLDAVVSQGMILSREKGLQLIRDSPEEIKTM 1014
Query: 1000 TLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
LYGD +RLQQ+L++FL ++ F + G + TK LG V++ ++E R
Sbjct: 1015 CLYGDQLRLQQILSNFLINALRFSTSEGWVGNKVVPTKRHLGSGVNVMHMEFR 1067
>gi|168017219|ref|XP_001761145.1| phytochrome 5a [Physcomitrella patens subsp. patens]
gi|162687485|gb|EDQ73867.1| phytochrome 5a [Physcomitrella patens subsp. patens]
Length = 1123
Score = 1319 bits (3414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 632/1058 (59%), Positives = 811/1058 (76%), Gaps = 14/1058 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGG 57
M+S++ A S+ + KS+HS RV QTT DAKL A +E S G SFDYS SV ++ +
Sbjct: 1 MASAKLAYSTGSGIKSKHSVRV-QQTTADAKLQAAYEESNDSGDSFDYSKSVGQAAKSTV 59
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
Q P + TAYL +Q+G L Q FGC+LA++E TF+VIAYSENA ++L ++ AVPSV
Sbjct: 60 QQVPA--QAVTAYLQRMQRGGLTQTFGCMLAVEENTFRVIAYSENALDMLDLMPQAVPSV 117
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G VLGIG+D +++FT SA+AL++A ++S++NP+ VH ++SGKPFYAI+HR+
Sbjct: 118 GQQDVLGIGTDSRSLFTPSSAAALERATQQSDLSMVNPVSVHSRSSGKPFYAILHRIDVG 177
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
+++DFEPV+P +V +++AG + S+KLAAKAI+RLQSLP G + LCDT+++EV ELTGYD
Sbjct: 178 IVMDFEPVRPNDVVVSSAGTIHSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYD 237
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVMAYKFHED+HGEV++EI +S LEPYLGLHYPATDIPQA+RFLFMKN+ RMIVDC A
Sbjct: 238 RVMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRFRMIVDCYAPP 297
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQK 357
VKV+QD+ L LTL GSTLRAPH CH QYM NM SIAS+ MAVVVND+E++G + QK
Sbjct: 298 VKVIQDKDLRQPLTLAGSTLRAPHGCHAQYMGNMGSIASVTMAVVVNDQEDDGGS---QK 354
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
+RLWGLVVCH+T+ R + FPLR ACEFL QVF + +N E+EL Q+ EK+ILRTQTLLC
Sbjct: 355 ARRLWGLVVCHHTSARMISFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLC 414
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GIV+QSPNIMDLVKCDGAAL Y N+ W LG+TP++ Q+ +I WL E H D
Sbjct: 415 DMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGNRFWLLGITPSEQQIKEIADWLLECHKD 474
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA LGD VCGMAA RI+PKD +FWFRS TA E++WGGAKH+ D+
Sbjct: 475 STGLSTDSLADAGYPGANLLGDAVCGMAAARITPKDFLFWFRSHTAKEIKWGGAKHDADD 534
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-I 596
+DDGRKM PRSSF AFLEVVK RS+PW+D EMDAIHSLQLILR +F+D+ D DTK+ I
Sbjct: 535 RDDGRKMTPRSSFNAFLEVVKRRSVPWEDIEMDAIHSLQLILRGSFQDID--DSDTKTMI 592
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
H++L DLK++GM EL V +EMVRLIETAT PILAVD G +NGWN K+AELTGLSV A
Sbjct: 593 HARLNDLKLQGMDELSTVANEMVRLIETATTPILAVDSSGFINGWNAKVAELTGLSVGDA 652
Query: 657 IGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
+G+ + L+ + S++ V+R+LYLALQG+EEQN++ ++T G + + LIVNAC+SR
Sbjct: 653 MGRSLVKDLILEESVEDVQRLLYLALQGEEEQNVEIRLRTFGPQKAKGAVILIVNACSSR 712
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
D+ +NVVGVCFV QD+T QK + DKFTRI GDYK+IVQNPNPLIPPIFGSD+ G+C EW+
Sbjct: 713 DVQENVVGVCFVGQDVTGQKMLHDKFTRIHGDYKSIVQNPNPLIPPIFGSDDLGYCTEWS 772
Query: 776 PAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPF 835
P+M KLTGWKR+EV+ K+L+ EVFG ++ CCRLK Q+A IVLN AM GQD +K PF
Sbjct: 773 PSMEKLTGWKRDEVLGKMLVGEVFGMHLMCCRLKGQDAVTKFMIVLNNAMDGQDTDKYPF 832
Query: 836 GFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKA 895
FF R GK+ E LL NK+ D +G +TGVFCFL +AS EL QAL VQR +E+ A +LK
Sbjct: 833 SFFDRQGKFVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKLKE 892
Query: 896 LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG 955
LAY +++I+NPL GI+F+R +ME T+L +QK+ + TSA C+RQL KILDD DL+SI DG
Sbjct: 893 LAYIRQEIKNPLYGIMFTRNLMEDTDLSDDQKQFMDTSAVCERQLRKILDDMDLESIEDG 952
Query: 956 YLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADF 1015
YL+LE EF + ++ A +SQ M+ S KG++++ ET +I L+GD +RLQQVLADF
Sbjct: 953 YLELETAEFEMGSMMDAVVSQGMVTSREKGLQLIRETPREIKDMCLFGDQVRLQQVLADF 1012
Query: 1016 LSISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
L ++ F P+ G + + TK +LG H+ +LE R
Sbjct: 1013 LLNAVRFTPSSEGWVGIKVVATKRRLGGGFHVVHLEFR 1050
>gi|168003331|ref|XP_001754366.1| phytochrome 5c [Physcomitrella patens subsp. patens]
gi|162694468|gb|EDQ80816.1| phytochrome 5c [Physcomitrella patens subsp. patens]
Length = 1124
Score = 1314 bits (3401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/1058 (59%), Positives = 802/1058 (75%), Gaps = 13/1058 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGG 57
M+S++ + S T KS+HS RV QTT DAKL A +E S G +F+YS SV ++ A
Sbjct: 1 MTSTKLSYSLGTTVKSKHSVRV-QQTTADAKLQAVYEESNDSGDAFNYSKSVGQAAKATV 59
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
Q P + ++YL +Q+G L Q FGC+LA++E TF+VIAYSENAPE+L +V HAVPSV
Sbjct: 60 QQVPA--QAVSSYLQRMQRGGLTQTFGCMLAVEESTFRVIAYSENAPEMLDLVPHAVPSV 117
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G VLGIG+D +++FT SASAL++A ++S++NPI VH ++SGKPFYAIVHR+
Sbjct: 118 GQQDVLGIGADARSLFTPSSASALERAASTSDLSMVNPISVHSRSSGKPFYAIVHRIDVG 177
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++IDFEPV+P +V ++ AGAL S+KLAAKA+ RLQSLP G + LCD +++EV ELTGYD
Sbjct: 178 VVIDFEPVRPNDVIISTAGALHSHKLAAKAVARLQSLPGGDIGLLCDAVVEEVRELTGYD 237
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVMAYKFH+D+HGEV++EI +S LE YLGLHYP+TDIPQA+RFLFMKN+VRMI DC A
Sbjct: 238 RVMAYKFHDDEHGEVLAEIRRSDLESYLGLHYPSTDIPQASRFLFMKNRVRMIADCCAPP 297
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQK 357
VKV+QD+ L +TL GSTLRAPH CH QYM NM S+AS+ +AV+VND+EE D + QK
Sbjct: 298 VKVIQDKDLRQPITLAGSTLRAPHGCHAQYMGNMGSVASITLAVIVNDQEE--DFGVQQK 355
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
+RLWGLVVCH+T+ R + FPLR ACEFL QVF + +N E+EL+ Q+ EK+ILRTQTLLC
Sbjct: 356 GRRLWGLVVCHHTSARTISFPLRSACEFLMQVFGLQLNMEVELQAQVKEKHILRTQTLLC 415
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GIV+QSPNIMDLVKCDGAAL Y + W LG TP + Q+ +I WL EYH D
Sbjct: 416 DMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGTTPTEQQITEIADWLLEYHKD 475
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA LGD VCGMAA RI+PKD +FWFRS TA E++WGGAKH+ DE
Sbjct: 476 STGLSTDSLADAGYPGANLLGDAVCGMAAARITPKDFLFWFRSHTAKEIKWGGAKHDADE 535
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-I 596
KDDGRKM PRSSF AFLEVVK RS+PW+D EMDAIHSLQLILR +F+D+ D D K+ I
Sbjct: 536 KDDGRKMAPRSSFNAFLEVVKRRSVPWEDIEMDAIHSLQLILRGSFQDID--DSDGKTMI 593
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
H++L DLK++GM EL V +EMVRLIETATVPILAVD G +NGWN K+AELTGL V A
Sbjct: 594 HARLHDLKLQGMDELSTVANEMVRLIETATVPILAVDSSGFINGWNAKVAELTGLPVGDA 653
Query: 657 IGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
+G+ + L+ + S++ V+R+LYLALQG+EEQN++ +KT G + + + LIVNAC+SR
Sbjct: 654 MGRSLVKDLILEESVEAVERLLYLALQGEEEQNVEVRLKTFGQQKSKGVLILIVNACSSR 713
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
D+ +NVVGVCFV QD+T QK V DKFTRI GDYK+IVQNPNPLIPPIFG DE G+C EW+
Sbjct: 714 DVQENVVGVCFVGQDVTGQKMVHDKFTRIHGDYKSIVQNPNPLIPPIFGGDELGYCTEWS 773
Query: 776 PAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPF 835
P+M KLTGWKREEV+ K+L+ EVFG + CCRLK Q+A IVLN AM GQD +K PF
Sbjct: 774 PSMEKLTGWKREEVLGKMLVGEVFGVQLMCCRLKGQDAVTKFMIVLNNAMDGQDTDKFPF 833
Query: 836 GFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKA 895
FF R GK+ E LL NK+ D + +TGVFCFL AS EL QAL VQR +E+ A +LK
Sbjct: 834 SFFDRQGKFVEALLTANKRTDADDYITGVFCFLHTASPELLQALTVQRATEKVAFAKLKE 893
Query: 896 LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG 955
LAY +++I+NPL GI+F+R +ME T+L EQK+ + TSA C+RQL KILDD DL+SI DG
Sbjct: 894 LAYIRQEIKNPLYGIMFTRNLMEDTDLSEEQKQFMDTSAVCERQLRKILDDMDLESIEDG 953
Query: 956 YLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADF 1015
YL+LE EF + ++ A +SQ M+ S KG++++ ET +I L+GD +RLQQVLAD+
Sbjct: 954 YLELETAEFDMGSMMDAVVSQGMITSREKGLQLIRETPREIKGMCLFGDQVRLQQVLADY 1013
Query: 1016 LSISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
L ++ F P+ G + + TK +L H+ +LE R
Sbjct: 1014 LLNAVRFTPSSEGWVGIKVVSTKKRLVGGFHVVHLEFR 1051
>gi|2499554|sp|Q39557.1|PHY2_CERPU RecName: Full=Phytochrome 2
gi|1314837|gb|AAB67863.1| phytochrome photoreceptor CERPU;PHY0;2 [Ceratodon purpureus]
Length = 1121
Score = 1308 bits (3385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/1058 (59%), Positives = 799/1058 (75%), Gaps = 16/1058 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
MS+ + SS+ + KS+HS RV AQTT DA L A +E SG S FDYS SV G
Sbjct: 1 MSAPKKTYSSTTSAKSKHSVRV-AQTTADAALEAVYEMSGDSGDSFDYSKSV------GQ 53
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+ TAYL +Q+G LIQ FGC++A++E F VIAYSENA E L ++ AVPS+
Sbjct: 54 SAESVPAGAVTAYLQRMQRGGLIQTFGCMVAVEEPNFCVIAYSENASEFLDLMPQAVPSM 113
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G+ VLGIG+DI+T+FT S +AL+KA ++SLLNPI VHC+ SGKP YAI HR+
Sbjct: 114 GEMDVLGIGTDIRTLFTPSSGAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIG 173
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++IDFE VK +V ++AAGALQS+KLAAKAITRLQ+LP G + LCDT+++EV ELTGYD
Sbjct: 174 IVIDFEAVKMNDVSVSAAGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYD 233
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVMAYKFHED+HGEVV+EI + LEPYLGLHYPATDIPQA+RFLFMKN+VR+I DC A
Sbjct: 234 RVMAYKFHEDEHGEVVAEIRRMDLEPYLGLHYPATDIPQASRFLFMKNRVRVIADCCASP 293
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQK 357
VK++QD + ++L GSTLRAPH CH QYM NM SIASLVMAV++ND EE+ + Q+
Sbjct: 294 VKLIQDPDIKQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEDSRGAI-QR 352
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
++LWGLVVCH+T+PR VPFPLR ACEFL QVF + +N E+EL Q+ EK+ILRTQTLLC
Sbjct: 353 GRKLWGLVVCHHTSPRTVPFPLRSACEFLMQVFGMQLNMEVELAAQLREKHILRTQTLLC 412
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GIV+Q+PNIMDLVKCDGAAL Y + W LG TP + Q+ DI WL EYH D
Sbjct: 413 DMLLRDAPIGIVSQTPNIMDLVKCDGAALYYGKRFWLLGTTPTENQIKDIAEWLLEYHKD 472
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DA Y GA LGD VCGMAA +I+ KD +FWFRS TA EV+WGGAKH+P E
Sbjct: 473 STGLSTDSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAE 532
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-I 596
KDDGRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR +F+D+ D DTK+ I
Sbjct: 533 KDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDID--DSDTKTMI 590
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
H++L DLK+ GM EL V +EMVRLIETAT PILAVD G++NGWN KIA +TGL V +A
Sbjct: 591 HARLNDLKLHGMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEA 650
Query: 657 IGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
+G+ + LV D S+ V+R+LYLA QG+EEQN++ ++KT G++ + + LIVNAC+SR
Sbjct: 651 MGRSLVKDLVLDESVVVVERLLYLASQGEEEQNVEIKLKTFGTQTEKEAVILIVNACSSR 710
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
D+ D+VVGVCFV QD+T QK MDKFTRI+GDYK IV+NP+PLIPPIFG DE+G+C EWN
Sbjct: 711 DVSDSVVGVCFVGQDVTGQKMFMDKFTRIQGDYKTIVKNPHPLIPPIFGGDEYGYCFEWN 770
Query: 776 PAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPF 835
PAM LTGWK +EV+ KLL+ E+FG M CCRLK+Q++ I LN AM G + +K F
Sbjct: 771 PAMEALTGWKHDEVVGKLLVGEIFGMEMMCCRLKSQDSMTKFMISLNNAMDGTNTDKFSF 830
Query: 836 GFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKA 895
F R GK+ E LL NK+ + +G +TGVFCFLQ+AS ELQQAL VQR +E+ A+ +LK
Sbjct: 831 SFCNREGKFVEALLSTNKRTNADGVITGVFCFLQIASSELQQALTVQRATEKVAIAKLKE 890
Query: 896 LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG 955
LAY +++I+NPL GI F+R+++E T+L +QK+ L TSA C++QL K+L+D DL+SI DG
Sbjct: 891 LAYIRQEIKNPLCGITFTRQLLEDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESIEDG 950
Query: 956 YLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADF 1015
YL+L+ EF + V+ A ISQ M S KG++I+ ET +I + L+GD IRLQQVL+DF
Sbjct: 951 YLELDTAEFEMGTVMDAVISQGMTTSREKGLQIIRETPREISTMRLFGDQIRLQQVLSDF 1010
Query: 1016 LSISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
L +I F P+ G + + T+ +LG +VH+ +LE R
Sbjct: 1011 LINAIRFTPSSEGWVKIKVVPTRKRLGGNVHVMHLEFR 1048
>gi|159147355|gb|ABW91071.1| phytochrome-4 [Ceratodon purpureus]
Length = 1125
Score = 1305 bits (3376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/1057 (59%), Positives = 800/1057 (75%), Gaps = 10/1057 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFE---TSGTSFDYSNSVRVSSTAGG 57
M+S++ + SS + KS+HS RV AQTT DAKL A +E SG SFDYS SV ++
Sbjct: 1 MTSTKLSYSSGASVKSKHSVRV-AQTTADAKLFAVYEESNNSGDSFDYSKSVGQAAKPAV 59
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
Q + VT AYL +Q+G L Q FGC++A++E TF+VIAYSENAPELL ++ AVPSV
Sbjct: 60 QAQVPAQAVT-AYLQRMQRGGLTQTFGCMIAVEENTFRVIAYSENAPELLDLMPQAVPSV 118
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G VLGIG+D +++FT S +AL++A +++++NPI VH ++SGKPFYAIVHR+
Sbjct: 119 GQQEVLGIGTDARSLFTPSSVAALERAASTHDLTMVNPISVHTRSSGKPFYAIVHRIDVG 178
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
+++DFEPV+P +V ++ AG L S+KLAAKAI RLQSLP G + LCDT+++EV ELTGYD
Sbjct: 179 VVMDFEPVRPNDVVISTAGTLHSHKLAAKAIARLQSLPGGDIGLLCDTVVEEVRELTGYD 238
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVMAYKFH+D+HGEV++EI +S LE YLGLHYP+TDIPQA+RFLFMKN+VRMI DC A
Sbjct: 239 RVMAYKFHDDEHGEVLAEIRRSDLESYLGLHYPSTDIPQASRFLFMKNRVRMIADCCAPP 298
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQK 357
KV+QD+ L +TL GSTLRAPH CH QYM NM S+AS+ +AV+VND+E+ D + QK
Sbjct: 299 XKVIQDKDLRQPVTLAGSTLRAPHGCHAQYMGNMGSVASITLAVIVNDQED--DFGVQQK 356
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
+RLWGLVVCH+T+ R + +PLR ACEFL QVF + +N E+EL+ Q+ EK+ILRTQTLLC
Sbjct: 357 GRRLWGLVVCHHTSARTISYPLRCACEFLMQVFGLQLNMEVELQAQMREKHILRTQTLLC 416
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GIV+QSPNIMDLVKCDGAAL Y ++ W LG+TP++ Q+ D+ WL E H D
Sbjct: 417 DMLLRDAPIGIVSQSPNIMDLVKCDGAALYYNDRFWLLGITPSEQQIKDVAEWLLENHKD 476
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY A LGD VCGMAA RISP D +FWFRS TA E++WGGAK E DE
Sbjct: 477 STGLSTDSLADAGYPSANLLGDAVCGMAAARISPSDFLFWFRSHTAKEIKWGGAKQEADE 536
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDGRKM PRSS AFLEVVK RSLPW+D EMDAIHSLQLILR +F+++ D IH
Sbjct: 537 KDDGRKMTPRSSLNAFLEVVKRRSLPWEDIEMDAIHSLQLILRGSFQEIDG-DSSKSMIH 595
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
++L D+K++GM EL V +EMVRLIETAT PILAVD +G +NGWN K+AELTGL V A+
Sbjct: 596 ARLHDMKLQGMDELSTVANEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPVGDAM 655
Query: 658 GKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
G+ + L+ D S++ V+R+LYLALQG+EEQNI+ +++T G + + + LIVNAC+SRD
Sbjct: 656 GRSLVNDLILDESVEVVERLLYLALQGEEEQNIEVQLRTFGPQKSKGAVILIVNACSSRD 715
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
+ +NVVGVCFV QD+T QK V DKFTRI GDYK+IVQNPNPLIPPIFGSDE G C EW+P
Sbjct: 716 VQENVVGVCFVGQDVTGQKMVHDKFTRIHGDYKSIVQNPNPLIPPIFGSDELGSCTEWSP 775
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
+M KLTGWKREEV+ K+L+ EVFG CCRLK Q+A IV+N AM GQD +K PF
Sbjct: 776 SMEKLTGWKREEVLGKMLVGEVFGMQQMCCRLKGQDAVTKFMIVINNAMDGQDTDKYPFS 835
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF RNGK+ E LL NK+ D +G +TGVFCFL +AS EL QAL VQR +E+ A +LK L
Sbjct: 836 FFDRNGKFVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKLKEL 895
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY +++I+NPL GI+F+R +ME T+L EQK+ + TSA C+RQL KILDD DL+SI DGY
Sbjct: 896 AYIRQEIKNPLYGIMFTRNLMEDTDLSDEQKQFMDTSAVCERQLRKILDDMDLESIEDGY 955
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
L+LE EF + ++ A +SQ M+ S KG++++ ET +I + L+GD +RLQQVLADFL
Sbjct: 956 LELETAEFEMGSMMDAVVSQGMVTSREKGLQLIRETPREIKNMCLFGDQVRLQQVLADFL 1015
Query: 1017 SISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
++ F P+ G + + TK +LG H+ +LE R
Sbjct: 1016 LNAVRFTPSSEGWVGIKVVPTKKRLGGGFHVVHLEFR 1052
>gi|1674478|gb|AAB19058.1| phytochrome photoreceptor [Ceratodon purpureus]
Length = 1121
Score = 1305 bits (3376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/1058 (59%), Positives = 798/1058 (75%), Gaps = 16/1058 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
MS+ + SS+ + KS+HS RV AQTT DA L A +E SG S FDYS SV G
Sbjct: 1 MSAPKKTYSSTTSAKSKHSVRV-AQTTADAALEAVYEMSGDSGDSFDYSKSV------GQ 53
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+ TAYL +Q+G LIQ FGC++A++E F VIAYSENA E L ++ AVPS+
Sbjct: 54 SAESVPAGAVTAYLQRMQRGGLIQTFGCMVAVEEPNFCVIAYSENASEFLDLMPQAVPSM 113
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G+ VLGIG+DI+T+FT S +AL+KA ++SLLNPI VHC+ SGKP YAI HR+
Sbjct: 114 GEMDVLGIGTDIRTLFTPSSGAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIG 173
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++IDFE VK +V ++AAGALQS+KLAAKAITRLQ+LP G + LCDT+++EV ELTGYD
Sbjct: 174 IVIDFEAVKMNDVSVSAAGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYD 233
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVMAYKFHED+HGEVV+EI + LEPYLGLHYPATDIPQA+RFLFMKN+VR+I DC A
Sbjct: 234 RVMAYKFHEDEHGEVVAEIRRMDLEPYLGLHYPATDIPQASRFLFMKNRVRVIADCCASP 293
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQK 357
VK++QD + ++L GSTLRAPH CH QYM NM SIASLVMAV++ND EE+ + Q+
Sbjct: 294 VKLIQDPDIKQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEDSRGAI-QR 352
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
++LWGLVVCH+T+PR VPFPLR ACEFL QVF + +N E+EL Q+ EK+ILRTQTLLC
Sbjct: 353 GRKLWGLVVCHHTSPRTVPFPLRSACEFLMQVFGMQLNMEVELAAQLREKHILRTQTLLC 412
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GIV+Q+PNIMDLVKCDGAAL Y + W LG TP + Q+ DI WL EYH D
Sbjct: 413 DMLLRDAPIGIVSQTPNIMDLVKCDGAALYYGKRFWLLGTTPTENQIKDIAEWLLEYHKD 472
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL D Y GA LGD VCGMAA +I+ KD +FWFRS TA EV+WGGAKH+P E
Sbjct: 473 STGLSTDSLADRNYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAE 532
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-I 596
KDDGRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR +F+D+ D DTK+ I
Sbjct: 533 KDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDID--DSDTKTMI 590
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
H++L DLK+ GM EL V +EMVRLIETAT PILAVD G++NGWN KIA +TGL V +A
Sbjct: 591 HARLNDLKLHGMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEA 650
Query: 657 IGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
+G+ + LV D S+ V+R+LYLA QG+EEQN++ ++KT G++ + + LIVNAC+SR
Sbjct: 651 MGRSLVKDLVLDESVVVVERLLYLASQGEEEQNVEIKLKTFGTQTEKEAVILIVNACSSR 710
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
D+ D+VVGVCFV QD+T QK MDKFTRI+GDYK IV+NP+PLIPPIFG DE+G+C EWN
Sbjct: 711 DVSDSVVGVCFVGQDVTGQKMFMDKFTRIQGDYKTIVKNPHPLIPPIFGGDEYGYCFEWN 770
Query: 776 PAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPF 835
PAM LTGWK +E++ KLL+ E+FG M CCRLK+Q++ I LN AM G + +K F
Sbjct: 771 PAMEALTGWKHDELVGKLLVGEIFGMEMMCCRLKSQDSMTKFMISLNNAMDGTNTDKFSF 830
Query: 836 GFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKA 895
F R GK+ E LL NK+ + +G +TGVFCFLQ+AS ELQQAL VQR +E+ A+ +LK
Sbjct: 831 SFCNREGKFVEALLSTNKRTNADGVITGVFCFLQIASSELQQALTVQRATEKVAIAKLKE 890
Query: 896 LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG 955
LAY +++I+NPL GI F+R+++E T+L +QK+ L TSA C++QL K+L+D DL+SI DG
Sbjct: 891 LAYIRQEIKNPLCGITFTRQLLEDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESIEDG 950
Query: 956 YLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADF 1015
YL+L+ EF + V+ A ISQ M S KG++I+ ET +I + L+GD IRLQQVL+DF
Sbjct: 951 YLELDTAEFEMGTVMDAVISQGMTTSREKGLQIIRETPREISTMRLFGDQIRLQQVLSDF 1010
Query: 1016 LSISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
L +I F P+ G + + T+ +LG +VH+ +LE R
Sbjct: 1011 LINAIRFTPSSEGWVKIKVVPTRKRLGGNVHVMHLEFR 1048
>gi|25986851|gb|AAM94956.1| phytochrome [Ceratodon purpureus]
Length = 1126
Score = 1305 bits (3376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/1060 (59%), Positives = 805/1060 (75%), Gaps = 15/1060 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGG 57
M+S++ A SS + KS+HS RV AQTT DAKL A +E S G SFDYS SV ++ + G
Sbjct: 1 MASAKMAYSSGSGIKSKHSVRV-AQTTSDAKLQAVYEESNDSGDSFDYSKSVAQAAKSTG 59
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
QQ + VT AYL +Q+G L Q FGC+LA++E TF+VIAYSENAPELL ++ AVPS+
Sbjct: 60 QQQVPAQAVT-AYLQRMQRGGLTQTFGCMLAVEENTFRVIAYSENAPELLDVMPQAVPSL 118
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G VLGIG+D +++FT SA+AL++A G ++SL+NPI VH + SGKPFYAI+HR+
Sbjct: 119 GQQDVLGIGTDARSLFTPSSATALERAAGAADLSLVNPISVHSRASGKPFYAIIHRIDVG 178
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
+++ FEPV+P +V ++ AG L S+KLAAKAI RLQ+L G + LCDT+++EV ELTGYD
Sbjct: 179 IVMGFEPVRPNDVIVSTAGTLHSHKLAAKAIARLQALSGGDIGLLCDTVVEEVRELTGYD 238
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVMAYKFHED+HGEV++EI +S LEPYLGLHYP+TDIPQA+RFLFMKN+VRMIVDC A
Sbjct: 239 RVMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPSTDIPQASRFLFMKNRVRMIVDCWAPP 298
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE--GDNTLP 355
VKV+QD+ L ++L GSTLRAPH CH QYM NM S+AS+ MAV+ ND+E++ G T
Sbjct: 299 VKVIQDKDLRQPISLAGSTLRAPHGCHAQYMGNMGSVASVTMAVIXNDQEDDFGGQQT-- 356
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ +RLWGLVVCH+T+ R + FPLR ACEFL QVF + +N E+ELE Q EK+ILRTQT+
Sbjct: 357 -RARRLWGLVVCHHTSARTISFPLRSACEFLMQVFGLQLNMEVELENQKREKHILRTQTM 415
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RDAP+GIV+Q PNIMDLVKCDGAAL Y + W LG+TP++ Q+ +I +WL E+H
Sbjct: 416 LCDMLLRDAPVGIVSQCPNIMDLVKCDGAALYYGKRFWLLGITPSEEQIEEIANWLLEHH 475
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL DAGY GA LGD VCGMAA RI+P D +FWFRS TA E++ GGAKHE
Sbjct: 476 QDSTGLSTDSLADAGYPGANLLGDAVCGMAAARITPTDFLFWFRSHTAKEIKRGGAKHEA 535
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
D+KDDGRKM PRSSF AFLEV+K RS+PW+D EMDAIHSLQLILR +F+D+ D DTK+
Sbjct: 536 DDKDDGRKMTPRSSFNAFLEVMKRRSVPWEDIEMDAIHSLQLILRGSFQDID--DSDTKT 593
Query: 596 -IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IH++L DLK++GM EL V +EMVRLIETAT PILAVD +G +NGWN K+AELTGL V
Sbjct: 594 MIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPVG 653
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A+G+ + L+ D S++ V+R+LYLALQG EEQ+++ +++T G + + LIVNAC+
Sbjct: 654 DAMGRSLVQDLIVDESVEVVERLLYLALQGDEEQDVEIQLRTFGPQKGKGAVILIVNACS 713
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
SRD+ DNVVGVCFV QD+T QK V DKFTRI GDYK+IVQNPNPLIPPIFGSDE G+C E
Sbjct: 714 SRDVQDNVVGVCFVGQDVTSQKQVHDKFTRIHGDYKSIVQNPNPLIPPIFGSDELGYCTE 773
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
W+P+M KLTGWKR+EV+ K+L+ EVFGT CCRLK Q++ IVLN AM GQD +K
Sbjct: 774 WSPSMEKLTGWKRDEVLGKMLVGEVFGTQQICCRLKGQDSVTKFMIVLNNAMDGQDTDKY 833
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF F+ R GK+ E LL NK+ D +G +TGVFCFL +AS EL QAL VQR +E+ A +L
Sbjct: 834 PFSFYDRQGKFVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKL 893
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY +++I+NPL GI+F+R +ME T+L EQK+ + TSA C+RQL KILDD DL+SI
Sbjct: 894 KELAYIRQEIKNPLYGIMFTRNLMEDTDLSDEQKQFMDTSAVCERQLRKILDDMDLESIE 953
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DGYL+LE E L ++ A +SQ M+ S KG++++ ET +I +L+GD +RLQ VLA
Sbjct: 954 DGYLELETAESELGSMMDAVVSQGMITSREKGLQLIRETPREINDMSLFGDQVRLQHVLA 1013
Query: 1014 DFLSISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
DFL ++ P+ G + + TK +LG H+ +LE R
Sbjct: 1014 DFLLNAVRLTPSSEGWVGIKVVPTKKRLGGGFHVVHLEFR 1053
>gi|183239026|gb|ACC60971.1| phytochrome C [Vitis riparia]
Length = 1123
Score = 1303 bits (3373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/1053 (58%), Positives = 794/1053 (75%), Gaps = 6/1053 (0%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S+++ S S++ +S+H ARV+AQT IDA+LH +FE S FDYS S+ + ++ P
Sbjct: 5 STNKTNCSRSSSARSKHGARVVAQTPIDAQLHVNFEESERHFDYSASIDFNISSSTGDVP 64
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
S +AYL +Q+G LIQPFGC++A+DE+ V+AYSENAPE+L + HAVPS+
Sbjct: 65 SS--TVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPHAVPSIEQQE 122
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L IG+D++T+F + A+ALQKA FGEV+LLNPILVHC+ SGKPFYAI+HR+ LIID
Sbjct: 123 ALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHCRNSGKPFYAILHRIDVGLIID 182
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++E ELTGYDRVM
Sbjct: 183 LEPVNPADVPITAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASELTGYDRVMV 242
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E K LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VKV+
Sbjct: 243 YKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKVI 302
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRL 361
Q+++L L+LCGSTLR+PH CH QYM NM S+ASLVM+V +N+E+++ ++ QK ++L
Sbjct: 303 QNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTESE-QQKGRKL 361
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGLVVCHNT+PRFVPFPLRYACEFL QVF + ++KE+EL Q+ EK+IL+TQT+LCDML+
Sbjct: 362 WGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQTVLCDMLL 421
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RDAP+GIVTQSPN+MDLV+CDGAAL Y+ K W LGVTP + Q+ DIV WL EYH STGL
Sbjct: 422 RDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLEYHSGSTGL 481
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
S DSL +AGY AL LGD VCG+AAV+I+ D +FWFRS TA E++WGGAKH+PD+KDDG
Sbjct: 482 STDSLMEAGYPAALVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKHDPDDKDDG 541
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLC 601
RKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D ++
Sbjct: 542 RKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQD-KSADDSKMIVNVPSV 600
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
D I+ +L VT+EMVRLIETA+VPILAVD G +NGWN K AELTGL + +AIG
Sbjct: 601 DASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQQAIGMPL 660
Query: 662 LTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+ LVE+ S D VK+ML +ALQG EEQN++ ++KT G + N+ P+ L+VNAC SRD+ DNV
Sbjct: 661 IDLVENDSADMVKKMLSMALQGIEEQNVEIKLKTFGPQENNGPVILVVNACCSRDIKDNV 720
Query: 722 VGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKL 781
VGVCFV QDIT QK VMDK+TRI+GDY IV+NP+ LIPPIF DE G C EWN AM L
Sbjct: 721 VGVCFVGQDITGQKMVMDKYTRIQGDYVGIVRNPSALIPPIFMMDEHGRCLEWNDAMQNL 780
Query: 782 TGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARN 841
+G KREE D++LL EVF N C++K+ + L I+LN A++GQD +K+ FGFF ++
Sbjct: 781 SGLKREEATDRMLLGEVFTVNNFGCQVKDHDTLTKLRILLNGAIAGQDAQKLLFGFFDQH 840
Query: 842 GKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKR 901
GKY E LL NK+ D EG +TGV CFL +AS ELQ A+ VQR+SEQ A LK LAY ++
Sbjct: 841 GKYIEALLSANKRTDAEGKITGVLCFLHVASPELQHAMQVQRISEQAAADSLKKLAYIRQ 900
Query: 902 QIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEM 961
QIR PL+GI+F + +M+ +EL +QK+ L TS CQ QL KI+DD+DL+SI + Y++L
Sbjct: 901 QIRKPLNGIMFIQNLMDSSELSQDQKKFLRTSMMCQEQLTKIVDDTDLESIEECYMELNS 960
Query: 962 VEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISIN 1021
EF L EVL ISQ M+ S + + I+ ++ ++ S LYGD++RLQQVL+DFL+ ++
Sbjct: 961 AEFNLGEVLEVVISQAMILSRERRVEIIYDSPAEVSSMFLYGDNLRLQQVLSDFLTNALL 1020
Query: 1022 FVP--NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
F P G + + ++ +G VH+ +LE R
Sbjct: 1021 FTPAFEGSSVALRVIPRRESIGTKVHIVHLEFR 1053
>gi|400792|sp|Q01549.1|PHY1_SELMA RecName: Full=Phytochrome 1
gi|22603|emb|CAA43698.1| phytochrome [Selaginella martensii]
Length = 1134
Score = 1298 bits (3358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/1064 (59%), Positives = 810/1064 (76%), Gaps = 20/1064 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
MS+++ SS ++ KS+HS RV AQTT DAKLHA +E SG S FDYS S+ + + G
Sbjct: 1 MSTTKLTYSSGSSAKSKHSVRV-AQTTADAKLHAVYEESGESGDSFDYSKSINATKSTG- 58
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+ + TAYL +Q+G L+QPFGC+LA++E +F+VIA+S+NA E+L ++ +VPS+
Sbjct: 59 --ETIPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSL 116
Query: 118 GD--HPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
G VL IG+D +T+FTA +ASAL+KA G ++S+LNPI V KTS KPFYAIVHR+
Sbjct: 117 GSGQQDVLTIGTDARTLFTA-AASALEKAAGAVDLSMLNPIWVQSKTSAKPFYAIVHRID 175
Query: 176 GSLIIDFEPVKPYEVPM-TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELT 234
L++D EPVK + + +AAGALQS+KLAAKAI+RLQSLP G + LCDT+++EV ++T
Sbjct: 176 VGLVMDLEPVKASDTRVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRDVT 235
Query: 235 GYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 294
GYD VMAYKFHED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFMKN+VRMI DC
Sbjct: 236 GYDLVMAYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCS 295
Query: 295 ARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL 354
A VK+ QD++L ++L GSTLRAPH CH QYM NM S+ASLVMA+++ND +E
Sbjct: 296 APPVKITQDKELRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAMIINDNDEPSGGGG 355
Query: 355 ---PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILR 411
K +RLWGLVVCH+T+PR VPF LR ACEFL QVF + +N E + + EK+ILR
Sbjct: 356 GGGQHKGRRLWGLVVCHHTSPRSVPF-LRSACEFLMQVFGLQLNMEAAVAAHVREKHILR 414
Query: 412 TQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWL 471
TQTLLCDML+RDAP+GIV+QSPNIMDLVKCDGAAL Y + W LG+TP++ Q+ DI WL
Sbjct: 415 TQTLLCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPSEAQIKDIAEWL 474
Query: 472 SEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
E+H DSTGLS DSL DAGY GA +LGD VCGMAA +I+ KD +FWFRS TA EV+WGGA
Sbjct: 475 LEHHKDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEVKWGGA 534
Query: 532 KHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDL 591
KH+PD+KDDGRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR +F+D+ D
Sbjct: 535 KHDPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDID--DS 592
Query: 592 DTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTG 650
DTK+ IH++L DLK++GM EL V +EMVRLIETAT PILAVD G +NGWN K+A++TG
Sbjct: 593 DTKTMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVADVTG 652
Query: 651 LSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIV 709
L V +A+G+ LV S D V+R+LYLALQG EEQN++ ++KT G + + + + L+V
Sbjct: 653 LPVTEAMGRSLAKELVLHESADMVERLLYLALQGDEEQNVELKLKTFGGQKDKEAVILVV 712
Query: 710 NACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFG 769
NACASRD+ DNVVGVCFV QD+T QK VMDKFTRI+GDYKAIVQNPNPLIPPIFG+DEFG
Sbjct: 713 NACASRDVSDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEFG 772
Query: 770 WCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD 829
+C EWNPAM KL+GW+REEV+ K+L+ E+FG M CRLK Q+A IVLN A GQD
Sbjct: 773 YCSEWNPAMEKLSGWRREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQD 832
Query: 830 PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTA 889
EK PF FF R GKY E LL K+ D EG++TGVFCFL +AS ELQQAL VQR +E+ A
Sbjct: 833 TEKFPFAFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVA 892
Query: 890 LKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDL 949
L +LK LAY +++I+NPL GI+F+R +ME T+L +QK+ + T A C++Q+ KILDD DL
Sbjct: 893 LSKLKELAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDL 952
Query: 950 DSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
+SI DGYL+L+ EF + V+ A ISQ M+ S K ++++ ET ++I + LYGD +RLQ
Sbjct: 953 ESIEDGYLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYGDQVRLQ 1012
Query: 1010 QVLADFLSISINFVPNGGQLM-VSSSLTKDQLGQSVHLAYLELR 1052
QVLADFL +I F P+ + + + ++ +LG VH+ +LE R
Sbjct: 1013 QVLADFLLNAIRFTPSSENWVGIKVATSRKRLGGVVHVMHLEFR 1056
>gi|168029421|ref|XP_001767224.1| phytochrome 5b3 [Physcomitrella patens subsp. patens]
gi|162681479|gb|EDQ67905.1| phytochrome 5b3 [Physcomitrella patens subsp. patens]
Length = 1131
Score = 1296 bits (3353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1057 (59%), Positives = 801/1057 (75%), Gaps = 11/1057 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGG 57
MSS++ + SS + KS+HS RV QTT DAKL A +E S G SFDYS SV ++ +
Sbjct: 1 MSSTKLSYSSGTSVKSKHSVRV-QQTTADAKLQAVYEESNDSGDSFDYSKSVGQATKSTV 59
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
Q P + TAYL +Q+G L Q FGC+LA++E TF+VIAYSENAPE+L ++ AVPSV
Sbjct: 60 QQVPA--QAVTAYLQRMQRGGLTQNFGCMLAVEESTFRVIAYSENAPEMLDLMPQAVPSV 117
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G VLGIG+D + +FT SAS L++A +++++NPI VH + SGKPFYAIVHR+
Sbjct: 118 GLKEVLGIGTDARLLFTPSSASTLERAAATSDLTMVNPISVHSRNSGKPFYAIVHRIDVG 177
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++IDFEPV+ +V ++ AGAL S+KLAAKA++RLQSLP G + LCD +++EV ELTGYD
Sbjct: 178 IVIDFEPVRSNDVVISTAGALHSHKLAAKAVSRLQSLPGGDIGLLCDAVVEEVRELTGYD 237
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVMAYKFH+D+HGEV++EI +S LE YLGLHYP+TDIPQA+RFLFMKN+VRMI DC A
Sbjct: 238 RVMAYKFHDDEHGEVLAEIRRSDLESYLGLHYPSTDIPQASRFLFMKNRVRMIADCCAPP 297
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQK 357
VKV+QD+ L +TL GSTLRAPH CH QYM NM S+AS+ +AV+V+D+EE D + QK
Sbjct: 298 VKVIQDKDLRQPITLAGSTLRAPHGCHAQYMGNMGSVASITLAVIVHDQEE--DFGVQQK 355
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
+RLWGLVVCH+T+PR + FPLR ACEFL QVF + +N E+EL+ Q+ EK+ILRTQTLLC
Sbjct: 356 GRRLWGLVVCHHTSPRTISFPLRSACEFLMQVFGLQLNMEVELQAQMKEKHILRTQTLLC 415
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GIV+QSPNIMDLVKCDGAAL Y+N+ W LG TP++ Q+ +I +WL E+H D
Sbjct: 416 DMLLRDAPVGIVSQSPNIMDLVKCDGAALYYENQFWLLGTTPSEEQIEEIAAWLLEHHKD 475
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA LGD VCGMAA RIS KD + WFRS +A E++WGGAKH+ ++
Sbjct: 476 STGLSTDSLADAGYPGANLLGDAVCGMAAARISSKDFLLWFRSHSAKEIKWGGAKHDAED 535
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD RKM PRSSF AFLEVVK RS+PW+D EMDAIHSLQLILR +F+DV T IH
Sbjct: 536 RDDSRKMTPRSSFNAFLEVVKRRSVPWEDIEMDAIHSLQLILRGSFQDVDGSGGKTM-IH 594
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
S+L DLK++GM EL V +EMVRLIETAT PILAVD +G +NGWN K+AELTGL V +A+
Sbjct: 595 SRLHDLKLQGMDELSTVANEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPVGEAM 654
Query: 658 GKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
G+ + L+ + ++ V+R+LYLALQG+EEQNI+ +KT G++ + L+VNAC+SRD
Sbjct: 655 GRSLVKDLILEEYVEVVERLLYLALQGEEEQNIEVSLKTFGAQKAKGAVILVVNACSSRD 714
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
+ +NVVGVCFV QD+T QK V DKFTRI GDYK+IVQ+PNPLIPPIFGSDE G+C EW+P
Sbjct: 715 VQENVVGVCFVGQDVTGQKMVHDKFTRIHGDYKSIVQSPNPLIPPIFGSDELGYCIEWSP 774
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
+M KLTGWKREEV+ K+L+ E+FG + CCRLK Q+A IVLN AM GQD +K PF
Sbjct: 775 SMEKLTGWKREEVLGKMLVGEIFGVHQMCCRLKGQDAVTKFMIVLNNAMDGQDTDKYPFS 834
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
F R GK E LL NK+ D +G +TGVFCFL +AS EL QAL VQR +E+ A +LK L
Sbjct: 835 FHDRQGKLVEALLTANKRTDADGYITGVFCFLHIASPELLQALTVQRATEKVAFAKLKEL 894
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY +++I+NPL GI+F+R +ME T+L EQK+ + TSA C+RQL KILDD DL+SI DGY
Sbjct: 895 AYIRQEIKNPLYGIMFTRNLMEDTDLSDEQKQYMDTSAVCERQLRKILDDMDLESIEDGY 954
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
L+LE +EF + ++ A +SQ M+ S KG++++ ET +I L+GD +RLQQVLADFL
Sbjct: 955 LELETMEFEMGSMMDAVVSQGMVTSREKGLQLIRETPREIQGMCLFGDQVRLQQVLADFL 1014
Query: 1017 SISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
++ F P+ G + + T+ +LG H+ +LE R
Sbjct: 1015 LNAVRFTPSSEGWVGIKVVPTRKRLGGGFHVVHLEFR 1051
>gi|225447543|ref|XP_002268724.1| PREDICTED: phytochrome C [Vitis vinifera]
Length = 1118
Score = 1293 bits (3346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/1053 (58%), Positives = 791/1053 (75%), Gaps = 6/1053 (0%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S+++ S S++ +S+H ARV+AQT IDA+LH +FE S FDYS SV + ++
Sbjct: 5 STNKTNCSRSSSARSKHGARVVAQTPIDAQLHVNFEESERHFDYSASVDFNISS--STSD 62
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+AYL +Q+G LIQPFGC++A+DE+ V+AYSENAPE+L + HAVPS+
Sbjct: 63 VPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPHAVPSIEQQE 122
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L IG+D++T+F + A+ALQKA FGEV+LLNPILVHC+ SGKPFYAI+HR+ LIID
Sbjct: 123 ALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHCRNSGKPFYAILHRIDVGLIID 182
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++E ELTGYDRVM
Sbjct: 183 LEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASELTGYDRVMV 242
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E K LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VKV+
Sbjct: 243 YKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKVI 302
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRL 361
Q+++L L+LCGSTLR+PH CH QYM NM S+ASLVM+V +N+E+++ ++ QK ++L
Sbjct: 303 QNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTESE-QQKGRKL 361
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGLVVCHNT+PRFVPFPLRYACEFL QVF + ++KE+EL Q+ EK+IL+TQT+LCDML+
Sbjct: 362 WGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQTVLCDMLL 421
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RDAP+GIVTQSPN+MDLV+CDGAAL Y+ K W LGVTP + Q+ DIV WL EYH STGL
Sbjct: 422 RDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLEYHSGSTGL 481
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
S DSL +AGY A LGD VCG+AAV+I+ D +FWFRS TA E++WGGAKH+PD+KDDG
Sbjct: 482 STDSLMEAGYPAASVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKHDPDDKDDG 541
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLC 601
RKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D ++
Sbjct: 542 RKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQD-KSADDSKMIVNVPSV 600
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
D I+ +L VT+EMVRLIETA+VPILAVD G +NGWN K AELTGL + +AIG
Sbjct: 601 DASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQQAIGMPL 660
Query: 662 LTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+ LVE+ S D VK+ML +ALQG EEQN++ ++KT G + N+ P+ L+VNAC SRD+ DNV
Sbjct: 661 INLVENDSADMVKKMLSMALQGIEEQNVEIKLKTFGPQENNGPVILVVNACCSRDIKDNV 720
Query: 722 VGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKL 781
VGVCFV QDIT QK VMDK+TRI+GDY IV+NP+ LIPPIF DE G C EWN AM L
Sbjct: 721 VGVCFVGQDITGQKMVMDKYTRIQGDYVGIVRNPSALIPPIFMMDEHGRCLEWNDAMQNL 780
Query: 782 TGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARN 841
+G KREE D++LL EVF N C++K+ + L I+LN A++GQD +K+ FGFF ++
Sbjct: 781 SGLKREEATDRMLLGEVFTVNNFGCQVKDHDTLTKLRILLNGAIAGQDAQKLLFGFFDQH 840
Query: 842 GKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKR 901
GKY E LL NK+ D EG +TGV CFL +AS ELQ A+ VQR+SEQ A LK LAY ++
Sbjct: 841 GKYIEALLSANKRTDAEGKITGVLCFLHVASPELQHAMQVQRISEQAAADSLKKLAYIRQ 900
Query: 902 QIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEM 961
QIR PL+GI+F + +M+ +EL +QK+ L TS CQ QL KI+DD+DL+SI + Y++L
Sbjct: 901 QIRKPLNGIMFIQNLMDSSELSQDQKKFLRTSMMCQEQLTKIVDDTDLESIEECYMELNS 960
Query: 962 VEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISIN 1021
EF L EVL ISQ M+ S + + I+ ++ ++ S LYGD++RLQQVL+DFL+ ++
Sbjct: 961 GEFNLGEVLEVVISQAMILSRERRVEIIYDSPAEVSSMLLYGDNLRLQQVLSDFLTNALL 1020
Query: 1022 FVP--NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
F P G + + ++ +G VH+ +LE R
Sbjct: 1021 FTPAFEGSSVALRVIPRRECIGTKVHIVHLEFR 1053
>gi|183239018|gb|ACC60967.1| phytochrome C [Vitis vinifera]
Length = 1118
Score = 1291 bits (3340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/1053 (58%), Positives = 791/1053 (75%), Gaps = 6/1053 (0%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S+++ S S++ +S+H ARV+AQT IDA+LH +FE S FDYS SV + ++
Sbjct: 5 STNKTNCSRSSSARSKHGARVVAQTPIDAQLHVNFEESERHFDYSASVDFNISS--STSD 62
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+AYL +Q+G LIQPFGC++A+DE+ V+AYSENAPE+L + HAVPS+
Sbjct: 63 VPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPHAVPSIEQQE 122
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L IG+D++T+F + A+ALQKA FGEV+LLNPILVHC+ SGKPFYAI+HR+ LIID
Sbjct: 123 ALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHCRNSGKPFYAILHRIDVGLIID 182
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++E ELTGYDRVM
Sbjct: 183 LEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASELTGYDRVMV 242
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E K LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VKV+
Sbjct: 243 YKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKVI 302
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRL 361
Q+++L L+LCGSTLR+PH CH QYM NM S+ASLVM+V +N+E+++ ++ QK ++L
Sbjct: 303 QNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTESK-QQKGRKL 361
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGLVVCHNT+PRFVPFPLRYACEFL QVF + ++KE+EL Q+ EK+IL+TQT+LCDML+
Sbjct: 362 WGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQTVLCDMLL 421
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RDAP+GIVTQSPN+MDLV+CDGAAL Y+ K W LGVTP + Q+ DIV WL E+H STGL
Sbjct: 422 RDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLEHHSGSTGL 481
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
S DSL +AGY A LGD VCG+AAV+I+ D +FWFRS TA E++WGGAKH+PD+KDDG
Sbjct: 482 STDSLMEAGYPAASVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKHDPDDKDDG 541
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLC 601
RKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D ++
Sbjct: 542 RKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQD-KSADDSKMIVNVPSV 600
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
D I+ +L VT+EMVRLIETA+VPILAVD G +NGWN K AELTGL + +AIG
Sbjct: 601 DASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQQAIGMPL 660
Query: 662 LTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+ LVE+ S D VK+ML +ALQG EEQN++ ++KT G + N+ P+ L+VNAC SRD+ DNV
Sbjct: 661 INLVENDSADMVKKMLSMALQGIEEQNVEIKLKTFGPQENNGPVILVVNACCSRDIKDNV 720
Query: 722 VGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKL 781
VGVCFV QDIT QK VMDK+TRI+GDY IV+NP+ LIPPIF DE G C EWN AM L
Sbjct: 721 VGVCFVGQDITGQKMVMDKYTRIQGDYVGIVRNPSALIPPIFMMDEHGRCLEWNDAMQNL 780
Query: 782 TGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARN 841
+G KREE D++LL EVF N C++K+ + L I+LN A++GQD +K+ FGFF ++
Sbjct: 781 SGLKREEATDRMLLGEVFTVNNFGCQVKDHDTLTKLRILLNGAIAGQDAQKLLFGFFDQH 840
Query: 842 GKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKR 901
GKY E LL NK+ D EG +TGV CFL +AS ELQ A+ VQR+SEQ A LK LAY ++
Sbjct: 841 GKYIEALLSANKRTDAEGKITGVLCFLHVASPELQHAMQVQRISEQAAADSLKKLAYIRQ 900
Query: 902 QIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEM 961
QIR P++GI+F + +M+ +EL +QK+ L TS CQ QL KI+DD+DL+SI + Y++L
Sbjct: 901 QIRKPINGIMFIQNLMDSSELSQDQKKFLRTSMMCQEQLTKIVDDTDLESIEECYMELNS 960
Query: 962 VEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISIN 1021
EF L EVL ISQ M+ S + + I+ ++ ++ S LYGD++RLQQVL+DFL+ ++
Sbjct: 961 GEFNLGEVLEVVISQAMILSRERRVEIIYDSPAEVSSMLLYGDNLRLQQVLSDFLTNALL 1020
Query: 1022 FVP--NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
F P G + + ++ +G VH+ +LE R
Sbjct: 1021 FTPAFEGSSVALRVIPRRESIGTKVHIVHLEFR 1053
>gi|168051425|ref|XP_001778155.1| phytochrome 1 [Physcomitrella patens subsp. patens]
gi|139001617|dbj|BAF51707.1| phytochrome1 [Physcomitrella patens]
gi|162670477|gb|EDQ57045.1| phytochrome 1 [Physcomitrella patens subsp. patens]
Length = 1123
Score = 1287 bits (3331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/1041 (59%), Positives = 788/1041 (75%), Gaps = 15/1041 (1%)
Query: 18 HSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHI 74
HS RV AQTT DA L A FE SG S FDYS SV S + + P TAYL +
Sbjct: 19 HSVRV-AQTTADAALQAVFEKSGDSGDSFDYSKSV---SKSTAESLPSG--AVTAYLQRM 72
Query: 75 QKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFT 134
Q+G L Q FGC++A++ F+VIAYSENAPE+L +V AVPSVG+ L IG+D++T+FT
Sbjct: 73 QRGGLTQSFGCMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFT 132
Query: 135 APSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTA 194
A S ++L+KA E+SLLNPI V+C+ SGK YAI HR+ ++IDFE VK + ++A
Sbjct: 133 ASSVASLEKAAEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSA 192
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
AGALQS+KLAAKAITRLQ+LP G + LCDT+++EV ELTGYDRVMAY+FHED+HGEVV+
Sbjct: 193 AGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVA 252
Query: 255 EITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCG 314
EI ++ LEPYLGLHYP TDIPQA+RFLFMKNKVR+I DC A VKV+QD L ++L G
Sbjct: 253 EIRRADLEPYLGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAG 312
Query: 315 STLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRF 374
STLR+PH CH QYM NM SIASLVMAV++ND EE+ ++ Q+ ++LWGLVVCH+T+PR
Sbjct: 313 STLRSPHGCHAQYMGNMGSIASLVMAVIINDNEEDSHGSV-QRGRKLWGLVVCHHTSPRT 371
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPN 434
VPFPLR AC FL QVF + +N E+EL Q+ EK+ILRTQTLLCDML+RDAP+GIV+Q PN
Sbjct: 372 VPFPLRSACGFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPN 431
Query: 435 IMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGA 494
IMDLVKCDGAAL Y + W LG TP + Q+ DI WL EYH DSTGLS DSL DA Y A
Sbjct: 432 IMDLVKCDGAALYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAA 491
Query: 495 LALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFL 554
LGD VCGMAA +I+ KD +FWFRS TA E++WGGAKH+P EKDDGRKMHPRSSFKAFL
Sbjct: 492 HLLGDAVCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHDPGEKDDGRKMHPRSSFKAFL 551
Query: 555 EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEA 613
EVVK RSLPW+D EMDAIHSLQLILR +F+D+ D DTK+ IH++L DLK+ M EL
Sbjct: 552 EVVKRRSLPWEDVEMDAIHSLQLILRGSFQDID--DSDTKTMIHARLNDLKLHDMDELSV 609
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDT 672
V +EMVRLIETAT PILAVD +G++NGWN KIA++TGL V +A+G+ + LV D S+
Sbjct: 610 VANEMVRLIETATAPILAVDSNGMINGWNAKIAQVTGLPVSEAMGRSLVKDLVTDESVAV 669
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
V+R+LYLAL+G+EEQN++ ++KT G++ + LIVNAC+SRD+ +NVVGVCFV QD+T
Sbjct: 670 VERLLYLALRGEEEQNVEIKLKTFGTQTEKGVVILIVNACSSRDVSENVVGVCFVGQDVT 729
Query: 733 PQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDK 792
QK MDKFTRI+GDYK IVQNP+PLIPPIFG+DEFG+C EWNPAM LTGWK++EV+ K
Sbjct: 730 GQKMFMDKFTRIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGK 789
Query: 793 LLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVN 852
LL+ E+FG M CCR+K+Q+A I LN AM GQ +K F FF R GKY + LL N
Sbjct: 790 LLVGEIFGMQMMCCRMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTN 849
Query: 853 KKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K+ + +G +TGVFCFLQ+AS ELQQAL VQR +E+ A+ +LK LAY +++I+NPL GI F
Sbjct: 850 KRTNADGVITGVFCFLQIASSELQQALKVQRATEKVAVAKLKELAYIRQEIKNPLCGITF 909
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVA 972
+R+++E T+L +Q++ L TSA C++QL K+L+D DL+SI DGYL+L+ EF + V+ A
Sbjct: 910 TRQLLEDTDLSDDQQQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAEFEMGTVMNA 969
Query: 973 SISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN-GGQLMV 1031
ISQ M S KG++I ET +I + L GD IRLQQVL+DFL ++ F P+ G + +
Sbjct: 970 VISQGMTTSREKGLQIFRETPREINTMRLLGDQIRLQQVLSDFLLNTVRFTPSPEGWVKI 1029
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
T+ +LG SVH+ +LE R
Sbjct: 1030 KVVPTRKRLGGSVHVVHLEFR 1050
>gi|25986845|gb|AAM94953.1| phytochrome [Physcomitrella patens]
Length = 1123
Score = 1278 bits (3306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/1041 (59%), Positives = 786/1041 (75%), Gaps = 15/1041 (1%)
Query: 18 HSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHI 74
HS RV AQTT DA L A FE SG S FDYS SV S + + P TAYL +
Sbjct: 19 HSVRV-AQTTADAALQAVFEKSGDSGDSFDYSKSV---SKSTAESLPSG--AVTAYLQRM 72
Query: 75 QKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFT 134
Q+G L Q FGC++A++ F+VIAYSENAPE+L +V AVPSVG+ L IG+D++T+FT
Sbjct: 73 QRGGLTQSFGCMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFT 132
Query: 135 APSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTA 194
A S ++L+KA E+SLLNPI V+C+ SGK YAI HR+ ++IDFE VK + ++A
Sbjct: 133 ASSVASLEKAAEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSA 192
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
AGALQS+KLAAKAITRLQ+LP G++ LCDT+++EV ELTGYDRVMAY+FHED+HGEVV+
Sbjct: 193 AGALQSHKLAAKAITRLQALPGGNIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVA 252
Query: 255 EITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCG 314
EI ++ LEPYLGLHYP TDIPQA+RFLFMKNKVR+I DC A VKV+QD L ++L G
Sbjct: 253 EIRRADLEPYLGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAG 312
Query: 315 STLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRF 374
STLR+PH CH QYM NM SIASLVMAV++ND EE+ ++ Q+ ++LWGLVVCH+T+PR
Sbjct: 313 STLRSPHGCHAQYMGNMGSIASLVMAVIINDNEEDSHGSV-QRGRKLWGLVVCHHTSPRT 371
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPN 434
VPFPLR AC FL QVF + +N E+EL Q+ EK+ILRTQTLLCDML+RDAP+GIV+Q PN
Sbjct: 372 VPFPLRSACGFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPN 431
Query: 435 IMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGA 494
IMDLVKCDGAAL Y + W LG TP + Q+ DI WL EYH DSTGLS DSL DA Y A
Sbjct: 432 IMDLVKCDGAALYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAA 491
Query: 495 LALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFL 554
LGD VCGMAA +I+ KD +FWFRS TA E++WGGAKH+P EKDDGRKMHPRSSFKAFL
Sbjct: 492 HLLGDAVCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHDPGEKDDGRKMHPRSSFKAFL 551
Query: 555 EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEA 613
EVVK RSLPW+D EMDAIHSLQLILR +F+D+ D DTK+ IH++L DLK+ M EL
Sbjct: 552 EVVKRRSLPWEDVEMDAIHSLQLILRGSFQDID--DSDTKTMIHARLNDLKLHDMDELSV 609
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDT 672
V +EMVRLIETAT PILAVD +G++NGWN KIA++TGL V +A G+ + LV D S+
Sbjct: 610 VANEMVRLIETATAPILAVDSNGMINGWNAKIAQVTGLPVSEAHGRSLVKDLVTDESVAV 669
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
V+R+LYLAL+G+EEQN++ ++KT G++ + LIV+AC+S + +NVVGVCFV QD+T
Sbjct: 670 VERLLYLALRGEEEQNVEIKLKTFGTQTEKGVVILIVDACSSIHVSENVVGVCFVGQDVT 729
Query: 733 PQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDK 792
QK MDKFTRI+GDYK IVQNP+PLIPPIFG+DEFG+C EWNPAM LTGWK++EV+ K
Sbjct: 730 GQKMFMDKFTRIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGK 789
Query: 793 LLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVN 852
LL+ E+FG M CCR+K+Q+A I LN AM GQ +K F FF R GKY + LL N
Sbjct: 790 LLVGEIFGMQMMCCRMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTN 849
Query: 853 KKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K+ + +G +TGVFCFLQ+AS ELQQAL VQR +E+ A+ +LK LAY +++I+NPL GI F
Sbjct: 850 KRTNADGVITGVFCFLQIASSELQQALKVQRATEKVAVAKLKELAYIRQEIKNPLCGITF 909
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVA 972
+R+++E T+L +Q++ L TSA C++QL K+L+D DL+SI DGYL+L+ EF + V+ A
Sbjct: 910 TRQLLEDTDLSDDQQQFLDTSAVCEQQLQKVLNDMDLESIEDGYLELDTAEFEMGTVMNA 969
Query: 973 SISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN-GGQLMV 1031
ISQ M S KG++I ET +I + L GD IRLQQVL+DFL ++ F P+ G + +
Sbjct: 970 VISQGMTTSREKGLQIFRETPREINTMRLLGDQIRLQQVLSDFLLNTVRFTPSPEGWVKI 1029
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
T+ +LG SVH+ +LE R
Sbjct: 1030 KVVPTRKRLGGSVHVVHLEFR 1050
>gi|139001625|dbj|BAF51709.1| phytochrome3 [Physcomitrella patens]
Length = 1122
Score = 1278 bits (3306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/1041 (59%), Positives = 790/1041 (75%), Gaps = 16/1041 (1%)
Query: 18 HSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHI 74
HS RV AQTT DA LHA FE SG S FDYS SV STAG TAYL +
Sbjct: 19 HSVRV-AQTTADAALHAVFEKSGVSGDNFDYSKSVS-KSTAGSLHTG----AVTAYLQRM 72
Query: 75 QKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFT 134
Q+G L Q FGC++A++E F+VIAYSENAPE L ++ AVP++G+ LGIG+D++T+FT
Sbjct: 73 QRGGLTQSFGCMVAVEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFT 132
Query: 135 APSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTA 194
SA++L+KA E+SLLNPI V+C+ S KP YAI HR+ ++IDFE V +V ++A
Sbjct: 133 PSSAASLEKAAETQEISLLNPITVYCR-SKKPLYAIAHRIDIGIVIDFEAVNMNDVTISA 191
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
GALQS+KLAAKAITRLQ+LP G + LCDT+++EV ELTGYDRVMAYKFHED+HGEVV+
Sbjct: 192 DGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVA 251
Query: 255 EITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCG 314
EI ++ LEPYLGLHYPATDIPQA+RFLFMKN+VRMI DC A VK++QD L ++L G
Sbjct: 252 EIRRTDLEPYLGLHYPATDIPQASRFLFMKNRVRMIGDCSAPPVKIVQDPNLRQPVSLAG 311
Query: 315 STLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRF 374
STLR+PH CH QYM NM SI+S+VMAV++ND E++ ++ Q+ ++LWGLVVCH+T+PR
Sbjct: 312 STLRSPHGCHAQYMGNMGSISSIVMAVIINDNEDDSRGSV-QRGRKLWGLVVCHHTSPRT 370
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPN 434
VPFPLR ACEFL QVF + +N E+EL Q+ EK+ILRTQTLLCDML+RDAP+GIV+Q PN
Sbjct: 371 VPFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQVPN 430
Query: 435 IMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGA 494
IMDLVKCDGAAL Y + W LG TP + Q+ DI WL EYH DSTGLS DSL DA Y A
Sbjct: 431 IMDLVKCDGAALYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAA 490
Query: 495 LALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFL 554
LGD VCGMAA +I+ KD +FWFRS TA E++WGGAKH+P EKDD RKMHPRSSFKAFL
Sbjct: 491 HLLGDAVCGMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSSFKAFL 550
Query: 555 EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEA 613
EVVK RSLPW+D EMDAIHSLQLILR +F+D+ D DTK+ IH++L DLK+ M EL
Sbjct: 551 EVVKRRSLPWEDVEMDAIHSLQLILRGSFQDID--DSDTKTMIHARLNDLKLHDMDELSI 608
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDT 672
V +EMVRLIETAT PILAVD +G++NGWN KIA+ TGL V +A+G+ + LV D S++
Sbjct: 609 VANEMVRLIETATAPILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEV 668
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
V+R+LYLAL+G+EEQ ++ ++KT G++ + LIVNACASRD+ +NVVGVCFV QD+T
Sbjct: 669 VERLLYLALRGEEEQGVEIKLKTFGAQTVKGAVILIVNACASRDVSENVVGVCFVGQDVT 728
Query: 733 PQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDK 792
QK MDKFTRI+GDYK IVQNP+PLIPPIFG+DEFG+C EWNPAM LTGWKR+EVI K
Sbjct: 729 GQKMFMDKFTRIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKRDEVIGK 788
Query: 793 LLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVN 852
LL+ E+FG CC++K+Q+A I LN AM GQ+ +K FF R G+Y + LL N
Sbjct: 789 LLVGEIFGMQKMCCQMKSQDAMTKFMISLNSAMDGQNTDKFSLSFFDREGRYVDALLSTN 848
Query: 853 KKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K+ + +GA+TGV CFLQ+AS ELQQAL VQ+ +E+ A+ +LK LAY +++I+NPL GI F
Sbjct: 849 KRTNADGAITGVICFLQIASSELQQALRVQQATEKVAIAKLKELAYIRQEIKNPLCGITF 908
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVA 972
+R+++E T+L +QK+ L TSA C++QL K+L+D DL+SI DGYL+L+ EF + V+ A
Sbjct: 909 TRQLLEDTDLSNDQKQFLDTSAVCEQQLQKVLNDLDLESIEDGYLELDTAEFEMRTVMDA 968
Query: 973 SISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNG-GQLMV 1031
ISQ M S KG++I+ ET +I++ L+GD +RLQQVL+DFL ++ F P+ G + +
Sbjct: 969 VISQGMTISREKGLQIIRETPREIITMRLFGDQVRLQQVLSDFLLNAVRFTPSSEGWVKI 1028
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
T+ +LG + H+ +LE R
Sbjct: 1029 KVVPTRKRLGGNEHVMHLEFR 1049
>gi|371940272|dbj|BAL45573.1| truncate phytochrome A2 protein [Glycine max]
Length = 759
Score = 1277 bits (3304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/734 (82%), Positives = 675/734 (91%), Gaps = 2/734 (0%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQP 82
+A T+DAKLHA FE SG+SFDYS+SVR+S TA G QPR D+VTTAYLHH+QKGK+IQP
Sbjct: 23 MALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQP 82
Query: 83 FGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQ 142
FGCLLALDEKT KVIAYSENAPE+LTMV+HAVPSVGDHP LGIG+DIKT+FTAPSASALQ
Sbjct: 83 FGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQ 142
Query: 143 KALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 202
KALGF EV LLNP+L+HCKTSGKPFYAI+HRVTGS+IIDFEPVKPYEVPMTAAGALQSYK
Sbjct: 143 KALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYK 202
Query: 203 LAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLE 262
LAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV++EITK GLE
Sbjct: 203 LAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLE 262
Query: 263 PYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHS 322
PYLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HV+VLQDEKLPFDLTLCGSTLRAPHS
Sbjct: 263 PYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHS 322
Query: 323 CHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLR 380
CH QYM NM+SIASLVMAVVVND EE+GD PQKRKRLWGLVVCHNTTPRFVPFPLR
Sbjct: 323 CHAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLR 382
Query: 381 YACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVK 440
YACEFLAQVFAIHVNKE+ELEYQI+EKNILRTQTLLCD++MRDAPLGIV++SPNIMDLVK
Sbjct: 383 YACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVK 442
Query: 441 CDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDV 500
CDGAAL+YKNK+WRLGVTP++ Q+ +I WLSEYHMDSTG S DSL DAG+ AL+LGDV
Sbjct: 443 CDGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDV 502
Query: 501 VCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTR 560
VCGMAAVR++ KD++FWFRS TA+E+RWGGAKHE EKDDGR+MHPRSSFK FL+VVK R
Sbjct: 503 VCGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKAR 562
Query: 561 SLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVR 620
SLPWK+YE+DA+HSLQLILRNAFKD ++DL+TK+I+++L DLKIEGM+ELEAVTSE+VR
Sbjct: 563 SLPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVR 622
Query: 621 LIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLA 680
LIETATVPILAVDVDGLVNGWN KIAELTGL V +A+GKH LTLVEDSS D VK+ML LA
Sbjct: 623 LIETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLA 682
Query: 681 LQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDK 740
L G+EE+N+QFEIKTHGSK++ PI+L+VNACASRDL DNVVGVCFVA DIT QK VMDK
Sbjct: 683 LLGEEEKNVQFEIKTHGSKMDSGPISLVVNACASRDLRDNVVGVCFVAHDITAQKNVMDK 742
Query: 741 FTRIEGDYKAIVQN 754
FTRIEGD + + +
Sbjct: 743 FTRIEGDTRQLYRT 756
>gi|168027033|ref|XP_001766035.1| phytochrome 3 [Physcomitrella patens subsp. patens]
gi|162682678|gb|EDQ69094.1| phytochrome 3 [Physcomitrella patens subsp. patens]
Length = 1123
Score = 1273 bits (3294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/1042 (59%), Positives = 790/1042 (75%), Gaps = 17/1042 (1%)
Query: 18 HSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHI 74
HS RV AQTT DA LHA FE SG S FDYS SV STAG TAYL +
Sbjct: 19 HSVRV-AQTTADAALHAVFEKSGVSGDNFDYSKSVS-KSTAGSLHTG----AVTAYLQRM 72
Query: 75 QKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFT 134
Q+G L Q FGC++A++E F+VIAYSENAPE L ++ AVP++G+ LGIG+D++T+FT
Sbjct: 73 QRGGLTQSFGCMVAVEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFT 132
Query: 135 APSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTA 194
SA++L+KA E+SLLNPI V+C+ S KP YAI HR+ ++IDFE V +V ++A
Sbjct: 133 PSSAASLEKAAETQEISLLNPITVYCR-SKKPLYAIAHRIDIGIVIDFEAVNMNDVTISA 191
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
GALQS+KLAAKAITRLQ+LP G + LCDT+++EV ELTGYDRVMAYKFHED+HGEVV+
Sbjct: 192 DGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVA 251
Query: 255 EITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCG 314
EI ++ LEPYLGLHYPATDIPQA+RFLFMKN+VRMI DC A VK++QD L ++L G
Sbjct: 252 EIRRTDLEPYLGLHYPATDIPQASRFLFMKNRVRMIGDCSAPPVKIVQDPNLRQPVSLAG 311
Query: 315 STLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRF 374
STLR+PH CH QYM NM SI+S+VMAV++ND E++ ++ Q+ ++LWGLVVCH+T+PR
Sbjct: 312 STLRSPHGCHAQYMGNMGSISSIVMAVIINDNEDDSRGSV-QRGRKLWGLVVCHHTSPRT 370
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPN 434
VPFPLR ACEFL QVF + +N E+EL Q+ EK+ILRTQTLLCDML+RDAP+GIV+Q PN
Sbjct: 371 VPFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQVPN 430
Query: 435 IMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGA 494
IMDLVKCDGAAL Y + W LG TP + Q+ DI WL EYH DSTGLS DSL DA Y A
Sbjct: 431 IMDLVKCDGAALYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAA 490
Query: 495 LALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFL 554
LGD VCGMAA +I+ KD +FWFRS TA E++WGGAKH+P EKDD RKMHPRSSFKAFL
Sbjct: 491 HLLGDAVCGMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSSFKAFL 550
Query: 555 EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEA 613
EVVK RSLPW+D EMDAIHSLQLILR +F+D+ D DTK+ IH++L DLK+ M EL
Sbjct: 551 EVVKRRSLPWEDVEMDAIHSLQLILRGSFQDID--DSDTKTMIHARLNDLKLHDMDELSI 608
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDT 672
V +EMVRLIETAT PILAVD +G++NGWN KIA+ TGL V +A+G+ + LV D S++
Sbjct: 609 VANEMVRLIETATAPILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEV 668
Query: 673 VKRMLYLALQG-QEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDI 731
V+R+LYLAL+G +EEQ ++ ++KT G++ + LIVNACASRD+ +NVVGVCFV QD+
Sbjct: 669 VERLLYLALRGSEEEQGVEIKLKTFGAQTVKGAVILIVNACASRDVSENVVGVCFVGQDV 728
Query: 732 TPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVID 791
T QK MDKFTRI+GDYK IVQNP+PLIPPIFG+DEFG+C EWNPAM LTGWKR+EVI
Sbjct: 729 TGQKMFMDKFTRIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKRDEVIG 788
Query: 792 KLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCV 851
KLL+ E+FG CC++K+Q+A I LN AM GQ+ +K FF R G+Y + LL
Sbjct: 789 KLLVGEIFGMQKMCCQMKSQDAMTKFMISLNSAMDGQNTDKFSLSFFDREGRYVDALLST 848
Query: 852 NKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGII 911
NK+ + +GA+TGV CFLQ+AS ELQQAL VQ+ +E+ A+ +LK LAY +++I+NPL GI
Sbjct: 849 NKRTNADGAITGVICFLQIASSELQQALRVQQATEKVAIAKLKELAYIRQEIKNPLCGIT 908
Query: 912 FSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLV 971
F+R+++E T+L +QK+ L TSA C++QL K+L+D DL+SI DGYL+L+ EF + V+
Sbjct: 909 FTRQLLEDTDLSNDQKQFLDTSAVCEQQLQKVLNDLDLESIEDGYLELDTAEFEMRTVMD 968
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNG-GQLM 1030
A ISQ M S KG++I+ ET +I++ L+GD +RLQQVL+DFL ++ F P+ G +
Sbjct: 969 AVISQGMTISREKGLQIIRETPREIITMRLFGDQVRLQQVLSDFLLNAVRFTPSSEGWVK 1028
Query: 1031 VSSSLTKDQLGQSVHLAYLELR 1052
+ T+ +LG + H+ +LE R
Sbjct: 1029 IKVVPTRKRLGGNEHVMHLEFR 1050
>gi|25986849|gb|AAM94955.1| phytochrome [Physcomitrella patens]
Length = 1122
Score = 1273 bits (3293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/1041 (59%), Positives = 787/1041 (75%), Gaps = 16/1041 (1%)
Query: 18 HSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHI 74
HS RV AQTT DA LHA FE SG S FDYS SV STAG TAYL +
Sbjct: 19 HSVRV-AQTTADAALHAVFEKSGVSGDNFDYSKSVS-KSTAGSLHTG----AVTAYLQRM 72
Query: 75 QKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFT 134
Q+G L Q FGC++A++E F+VIAYSENAPE L ++ AVP++G+ LGIG+D++T+FT
Sbjct: 73 QRGGLTQSFGCMVAVEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFT 132
Query: 135 APSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTA 194
SA++L+KA E+SLLNPI V+C+ S KP YAI HR+ ++IDFE V +V ++A
Sbjct: 133 PSSAASLEKAAETQEISLLNPITVYCR-SKKPLYAIAHRIDIGIVIDFEAVNMNDVTISA 191
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
GALQS+KLAAKAITRLQ+LP G + LCDT+++EV ELTGYDRVMAYKFHED+HGEVV+
Sbjct: 192 DGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVA 251
Query: 255 EITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCG 314
EI ++ LEPYLGLHYPATDIPQA+RFLFMKN+VRMI DC A K++QD L ++L G
Sbjct: 252 EIRRTDLEPYLGLHYPATDIPQASRFLFMKNRVRMIGDCSAPPEKIVQDPNLRQPVSLAG 311
Query: 315 STLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRF 374
STLR+PH CH QYM NM SI+S+VMAV++ND E++ ++ + RK+ WGLVVCH+T+PR
Sbjct: 312 STLRSPHGCHAQYMGNMGSISSIVMAVIINDNEDDSRGSVQRGRKQ-WGLVVCHHTSPRT 370
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPN 434
VPFPLR ACEFL QVF + +N E+EL Q+ EK+ILRTQTLLCDML+RDAP GIV+Q PN
Sbjct: 371 VPFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPTGIVSQVPN 430
Query: 435 IMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGA 494
IMDLVKCDGAAL Y + W LG TP + Q+ DI WL EYH DSTGLS DSL DA Y A
Sbjct: 431 IMDLVKCDGAALYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAA 490
Query: 495 LALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFL 554
LGD VCGMAA +I+ KD +FWFRS TA E++WGGAKH+P EKDD RKMHPRS FKAFL
Sbjct: 491 HLLGDAVCGMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSPFKAFL 550
Query: 555 EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEA 613
EVVK RSLPW+D EMDAIHSLQLILR +F+D+ D DTK+ IH++L DLK+ M EL
Sbjct: 551 EVVKRRSLPWEDVEMDAIHSLQLILRGSFQDID--DSDTKTMIHARLNDLKLHDMDELSI 608
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDT 672
V +EMVRLIETAT PILAVD +G++NGWN KIA+ TGL V +A+G+ + LV D S++
Sbjct: 609 VANEMVRLIETATAPILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEV 668
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
V+R+LYLAL+G+EEQ ++ ++KT G++ +TLIVNACASRD+ +NVVGVCFV QD+T
Sbjct: 669 VERLLYLALRGEEEQGVEIKLKTFGAQTVKGAVTLIVNACASRDVSENVVGVCFVGQDVT 728
Query: 733 PQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDK 792
QK MDKFTRI+GDYK IVQNP+PLIPPIFG+DEFG+C EWNPAM LTGWKR+EVI K
Sbjct: 729 GQKMFMDKFTRIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKRDEVIGK 788
Query: 793 LLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVN 852
LL+ E+FG CC++K+Q+A I LN AM GQ+ +K FF R G+Y + LL N
Sbjct: 789 LLVGEIFGMQKMCCQMKSQDAMTKFMISLNSAMDGQNTDKFSLSFFDREGRYVDALLSTN 848
Query: 853 KKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K+ + +GA+TGV CFLQ+AS ELQQAL VQ+ +E+ A+ +LK LAY +++I+NPL GI F
Sbjct: 849 KRTNADGAITGVICFLQIASSELQQALRVQQATEKVAIAKLKELAYIRQEIKNPLCGITF 908
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVA 972
+R+++E T+L +QK+ L TSA C++QL K+L+D DL+SI DGYL+L+ EF + V+ A
Sbjct: 909 TRQLLEDTDLSNDQKQFLDTSAVCEQQLQKVLNDLDLESIEDGYLELDTAEFEMRTVMDA 968
Query: 973 SISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNG-GQLMV 1031
ISQ M S KG++I+ ET +I++ L+GD +RLQQVL+DFL ++ F P+ G + +
Sbjct: 969 VISQGMTISREKGLQIIRETPREIITMRLFGDQVRLQQVLSDFLLNAVRFTPSSEGWVKI 1028
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
T+ +LG + H+ +LE R
Sbjct: 1029 KVVPTRKRLGGNEHVMHLEFR 1049
>gi|548512|sp|P36505.1|PHY1_PHYPA RecName: Full=Phytochrome 1
gi|402606|emb|CAA52933.1| phytochrome [Physcomitrella patens]
Length = 1132
Score = 1267 bits (3278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/1041 (59%), Positives = 780/1041 (74%), Gaps = 15/1041 (1%)
Query: 18 HSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHI 74
HS RV AQTT DA L A FE SG S FDYS SV S + + P TAYL +
Sbjct: 19 HSVRV-AQTTADAALQAVFEKSGDSGDSFDYSKSV---SKSTAESLPSG--AVTAYLQRM 72
Query: 75 QKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFT 134
Q+G L Q FGC++A++ F+VIAYSENAPE+L +V AVPSVG+ L IG+D++T+FT
Sbjct: 73 QRGGLTQSFGCMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFT 132
Query: 135 APSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTA 194
A S ++L+KA E+SLLNPI V+C+ SGK YAI HR+ ++IDFE VK + ++A
Sbjct: 133 ASSVASLEKAAEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSA 192
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
AGALQS+KLAAKAITRLQ+LP G++ LCDT+++EV ELTGYDRVMAY+FHED+HGEVV+
Sbjct: 193 AGALQSHKLAAKAITRLQALPGGNIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVA 252
Query: 255 EITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCG 314
EI ++ LEPYLGLHYP TDIPQA+RFLFMKNKVR+I DC A VKV+QD L ++L G
Sbjct: 253 EIRRADLEPYLGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAG 312
Query: 315 STLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRF 374
STLR+PH CH QYM NM SIASLVMAV++ND EE+ ++ Q+ ++LWGLVVCH+T+PR
Sbjct: 313 STLRSPHGCHAQYMGNMGSIASLVMAVIINDNEEDSHGSV-QRGRKLWGLVVCHHTSPRT 371
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPN 434
VPFPLR AC FL QVF + +N E+E Q+ EK+ILRTQTLLCDML+RDAP+GIV+Q PN
Sbjct: 372 VPFPLRSACGFLMQVFGLQLNMEVESAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPN 431
Query: 435 IMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGA 494
IMDLVKCDGAAL Y W LG TP + Q+ DI WL EYH DSTGLS DSL DA Y A
Sbjct: 432 IMDLVKCDGAALYYGKPFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAA 491
Query: 495 LALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFL 554
LGD VCGMAA +I+ KD +FWFRS TA E++WGGAKH+P E DGRKMHPRSSFKAFL
Sbjct: 492 HLLGDAVCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHDPGENHDGRKMHPRSSFKAFL 551
Query: 555 EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEA 613
EVVK RSLPW+D EMDAIHSLQLILR +F+D+ D DTK+ IH++L DLK+ M EL
Sbjct: 552 EVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIA--DSDTKTMIHARLNDLKLHDMDELSV 609
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDT 672
V +EMVRLIETAT PILAVD +G++NGWN KIA++TGL V +A G+ + LV D S+
Sbjct: 610 VANEMVRLIETATAPILAVDSNGMINGWNAKIAQVTGLPVSEAHGRSLVKDLVTDESVAV 669
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
V+R+LYLAL+G+EEQN++ ++KT G++ + LIV+AC+S + +NVVGVCFV QD+T
Sbjct: 670 VERLLYLALRGEEEQNVEIKLKTFGTQTEKGVVILIVDACSSIHVSENVVGVCFVGQDVT 729
Query: 733 PQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDK 792
QK MDKFTRI+GDYK IVQNP+PLIPPIFG+DEFG+C EWNPAM LTGWK++EV+ K
Sbjct: 730 GQKMFMDKFTRIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGK 789
Query: 793 LLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVN 852
LL+ E+FG M CCR+K+Q+A I LN AM GQ +K F FF R GKY + LL N
Sbjct: 790 LLVGEIFGMQMMCCRMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTN 849
Query: 853 KKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K+ + +G +TGVFCFLQ+AS ELQQAL VQR +E+ A+ +LK LAY R+I+NPL G+ F
Sbjct: 850 KRTNADGVITGVFCFLQIASSELQQALKVQRATEKVAVAKLKELAYIVREIKNPLCGLTF 909
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVA 972
+R+++E T+L +Q++ L TSA C++QL K L+D DL+SI DGYL+L+ EF + V+ A
Sbjct: 910 TRQLLEDTDLSDDQQQFLDTSAVCEQQLQKSLNDMDLESIEDGYLELDTAEFEMGTVMNA 969
Query: 973 SISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN-GGQLMV 1031
ISQ M S KG++I ET +I + L GD IRLQQVL+DFL ++ F P+ G + +
Sbjct: 970 VISQGMTTSREKGLQIFRETPREINTMRLLGDQIRLQQVLSDFLLNTVRFTPSPEGWVKI 1029
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
T+ +LG SVH+ +LE R
Sbjct: 1030 KVVPTRKRLGGSVHVVHLEFR 1050
>gi|51556875|gb|AAU06208.1| phytochrome C [Triticum aestivum]
gi|51556889|gb|AAU06215.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1261 bits (3264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/1058 (57%), Positives = 789/1058 (74%), Gaps = 11/1058 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++RPA S ++ +S+HS RV+AQT +DA+LHA+FE S FDYS+SV + +G
Sbjct: 6 SNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSHRHFDYSSSVSALNRSGAS--- 62
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+ +AYL ++Q+G+ IQPFGCLLA+ ++F ++AYSENA E+L + HAVP++
Sbjct: 63 -TSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRD 121
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L +G+D++T+F + SA AL KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID
Sbjct: 122 ALAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 181
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLP G++ LCD +++EV ELTGYDRVMA
Sbjct: 182 LEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPGGNLSLLCDVLVREVSELTGYDRVMA 241
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++
Sbjct: 242 YKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLI 301
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN-DEEEEGDNTLPQ--KR 358
QD+ L ++LCGST+RAPH CH QYM NM SIASLVM++ +N DE+E+GD Q K
Sbjct: 302 QDDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDEDEDGDTGSDQQPKG 361
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLCD
Sbjct: 362 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCD 421
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
ML+RDAP+GI TQSPN+MDLVKCDGAAL Y+N+I LG TP++ ++ IV+WL E H S
Sbjct: 422 MLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGS 481
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DE 537
TGLS DSL +AGY GA ALG+VVCGMAA++IS K IFWFRS TA E++WGGAKHEP D
Sbjct: 482 TGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDA 541
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
D+GR+MHPRSSF+AFLEVVK RS+PW+D EMDAIHSLQLILR + +D D +SI
Sbjct: 542 DDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNTARSIV 601
Query: 598 SKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
D KI+G+ EL+ VT+EMVRLIETAT PILAVD+ G +NGWN K+AE+TGL +
Sbjct: 602 EAPSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTE 661
Query: 656 AIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
AIG + LVE S++ VK+ML ALQG EEQN++ ++KT + + P+ L+VNAC SR
Sbjct: 662 AIGMLLVDLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTFHQQESKGPVVLMVNACCSR 721
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
DL D VVGVCFVAQD+T K VMDK+TRI+GDY AIV+NPN LIPPIF ++ G C EWN
Sbjct: 722 DLSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEWN 781
Query: 776 PAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPF 835
AM K+TG KRE+ IDKLL+ EVF + CR+K+Q L I++N +SGQ+PEK+ F
Sbjct: 782 EAMQKITGIKREDAIDKLLIGEVFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLAF 841
Query: 836 GFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKA 895
GFF NGKY E LL NK+ D EG +TG CFL +AS ELQ AL VQ++SEQ A K
Sbjct: 842 GFFNTNGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFKE 901
Query: 896 LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG 955
L Y +++++NPL+G+ F+RK++E ++L EQ++L ++ CQ QL KIL D+DL+ I
Sbjct: 902 LTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQC 961
Query: 956 YLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADF 1015
Y+++ VEF L E L + Q M S K I + + ++ S LYGD++RLQQVLAD+
Sbjct: 962 YMEMNTVEFNLEEALNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADY 1021
Query: 1016 LSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
L+ ++ F P G +++ K+ +G + +A+LE R
Sbjct: 1022 LACTLQFTRPAEGPIVLQVIPKKEHIGSGMQIAHLEFR 1059
>gi|3724336|dbj|BAA33774.1| phytochrome 2 [Adiantum capillus-veneris]
Length = 973
Score = 1254 bits (3245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/965 (62%), Positives = 759/965 (78%), Gaps = 18/965 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVI-AQTTIDAKLHADFE-------TSGTSFDYSNSVR-VS 52
S++ P SSS+ S+H+ RV+ AQTT DAKLHA FE T G+SFDY S+
Sbjct: 11 SAAEPRSSSSSVVGSKHNRRVVVAQTTADAKLHAVFEQAQSEGDTGGSSFDYMRSIEDAR 70
Query: 53 STAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNH 112
+ ++ P + TAYL +Q+G LIQPFGC+LAL+E +F+VIAYSENA E+L ++
Sbjct: 71 GSVLSERVPA--QAVTAYLQRMQRGGLIQPFGCMLALEEGSFRVIAYSENAAEMLDLMPQ 128
Query: 113 AVPSVGDHP-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIV 171
+VPSVG VLGIG+D +T+FT SA+AL+KA G +VS+LNPI VHC++S KPF AIV
Sbjct: 129 SVPSVGVQVLVLGIGTDARTLFTYASAAALEKASGAVDVSMLNPITVHCRSSSKPFNAIV 188
Query: 172 HRVTGSLIIDFEPVKPYEVPM-TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEV 230
HR+ L+IDFEPV+P +V + AAGALQS+KLAAKAI+RLQ+LP G ++ LCD++++EV
Sbjct: 189 HRIDVGLVIDFEPVRPADVAVWAAAGALQSHKLAAKAISRLQALPVGDIDLLCDSVVEEV 248
Query: 231 FELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMI 290
ELTGYDRVMAYKFHED+HGEV++EI +S LEPYLGLHYPATDIPQA+RFLFMKN+VRMI
Sbjct: 249 RELTGYDRVMAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMI 308
Query: 291 VDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG 350
DCRA V+V+QD++L L+L GSTLRAPH CH QYM NM SIASLVMAVVVND +E+
Sbjct: 309 CDCRALPVRVIQDKELRQPLSLAGSTLRAPHGCHSQYMANMGSIASLVMAVVVNDNDEDV 368
Query: 351 DNTLPQ-KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNI 409
N Q K +RLWGLVVCH+TTPR VPF LR ACEFL QVF + +N ELEL Q+ EK+I
Sbjct: 369 SNRSQQPKMRRLWGLVVCHHTTPRAVPFALRSACEFLMQVFGLQLNMELELAAQMREKHI 428
Query: 410 LRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVS 469
LRTQTLLCDML+RDAP+GIV++SPNIMDLVKCDGAAL Y W LG TP + Q+ D+
Sbjct: 429 LRTQTLLCDMLLRDAPIGIVSESPNIMDLVKCDGAALYYGKNFWLLGTTPIEAQIKDLAE 488
Query: 470 WLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWG 529
WL + H DSTGLS DSL DAGY GA ALGD VCGMAA +I+ +D +FWFRS TA E++WG
Sbjct: 489 WLLDVHRDSTGLSTDSLADAGYPGAAALGDAVCGMAAAKITTRDFLFWFRSHTAKEIKWG 548
Query: 530 GAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTL 589
GAKH+P+++DDGRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR +F+D+
Sbjct: 549 GAKHDPEDRDDGRKMHPRSSFKAFLEVVKRRSLPWEDMEMDAIHSLQLILRGSFQDID-- 606
Query: 590 DLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
D DTK+ IH++L DLK+ GM EL V +EMVRLIETAT PI AVD G +NGWN K+AEL
Sbjct: 607 DSDTKTMIHARLNDLKLHGMDELSTVANEMVRLIETATAPIFAVDAGGFINGWNAKVAEL 666
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGL+V++A+ + + +V ++S++T +R+L LALQGQEEQN++ ++KT+G + P+ L
Sbjct: 667 TGLTVEEAMSRSLVRDVVVNASMETAERVLDLALQGQEEQNVEIKLKTYGDQAIKGPVIL 726
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
IVNAC+SRD DNVVGVCFV QD+T QK VMDKFTRI+GDYK IVQNPNPLIPPIFG+DE
Sbjct: 727 IVNACSSRDFTDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKTIVQNPNPLIPPIFGADE 786
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
FG+C EWNPAM K +GWKRE+VI K+L+ EVFG+++ACC+L+ Q++ I+LN AM G
Sbjct: 787 FGYCSEWNPAMEKFSGWKREDVIGKMLIGEVFGSDLACCKLRGQDSMTKFMIILNAAMGG 846
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
+D ++ PFGFF R GKYAE LL NK+ D +GA+TGVFCFL AS ELQQAL VQ+ S +
Sbjct: 847 RDSDRFPFGFFDRYGKYAEALLIANKRTDSDGAITGVFCFLHTASPELQQALQVQKRSAR 906
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
TAL RLK +AY K++IRNPL GI+F+RK+++ T L EQK+++ TS+ C++QL ILD+
Sbjct: 907 TALDRLKEVAYMKQEIRNPLYGIVFTRKLLDNTNLTDEQKQIMETSSLCEKQLQNILDED 966
Query: 948 DLDSI 952
+ + +
Sbjct: 967 NFEKL 971
>gi|51556879|gb|AAU06210.1| phytochrome C [Triticum aestivum]
gi|51556881|gb|AAU06211.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1250 bits (3234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/1059 (57%), Positives = 791/1059 (74%), Gaps = 13/1059 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++RPA S ++ +S+HS RV+AQT +DA+LHA+FE S FDYS+SV + +G
Sbjct: 6 SNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS--- 62
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+ +AYL ++Q+G+ IQPFGCLLA+ ++F ++AYSENA E+L + HAVP++
Sbjct: 63 -TSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRD 121
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L +G+D++T+F + SA AL KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID
Sbjct: 122 ALAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 181
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMA
Sbjct: 182 LEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 241
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++
Sbjct: 242 YKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLI 301
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQK 357
QD+ L ++LCGST+RAPH CH QYM NM SIASLVM++ +N++++E +T P+
Sbjct: 302 QDDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKG 361
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLC
Sbjct: 362 RK-LWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLC 420
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GI TQSPN+MDLVKCDGAAL Y+N+I LG TP++ ++ IV+WL E H
Sbjct: 421 DMLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDG 480
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-D 536
STGLS DSL +AGY GA ALG+VVCGMAA++IS K IFWFRS TA E++WGGAKHEP D
Sbjct: 481 STGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
D+GR+MHPRSSF+AFLEVVK RS+PW+D EMDAIHSLQLILR + +D D + +SI
Sbjct: 541 ADDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSI 600
Query: 597 HSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
D KI+G+ EL+ VT+EMVRLIETAT PILAVD+ G +NGWN K+AE+TGL
Sbjct: 601 VEAPSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTT 660
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIG + LVE S++ VK+ML ALQG EEQN++ ++KT + + P+ L+VNAC S
Sbjct: 661 EAIGMLLVDLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCS 720
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDL D VVGVCFVAQD+T K VMDK+TRI+GDY AIV+NPN LIPPIF ++ G C EW
Sbjct: 721 RDLSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEW 780
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM K+TG KRE+ IDKLL+ E+F + CR+K+Q L I++N +SGQ+PEK+
Sbjct: 781 NEAMQKITGIKREDAIDKLLIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLA 840
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
FGFF +GKY E LL NK+ D EG +TG CFL +AS ELQ AL VQ++SEQ A K
Sbjct: 841 FGFFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
L Y +++++NPL+G+ F+RK++E ++L EQ++L ++ CQ QL KIL D+DL+ I
Sbjct: 901 ELTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
Y+++ VEF L E L + Q M S K I + + ++ S LYGD++RLQQVLAD
Sbjct: 961 CYMEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLAD 1020
Query: 1015 FLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+L+ ++ F P G +++ K+ +G + +A+LE R
Sbjct: 1021 YLACTLQFTRPAEGPIVLQVIPKKEHIGSGMQIAHLEFR 1059
>gi|51556883|gb|AAU06212.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1249 bits (3232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/1059 (57%), Positives = 791/1059 (74%), Gaps = 13/1059 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++RPA S ++ +S+HS RV+AQT +DA+LHA+FE S FDYS+SV + +G
Sbjct: 6 SNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS--- 62
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+ +AYL ++Q+G+ IQPFGCLLA+ ++F ++AYSENA E+L + HAVP++
Sbjct: 63 -TSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRD 121
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L +G+D++T+F + SA AL KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID
Sbjct: 122 ALAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 181
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMA
Sbjct: 182 LEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 241
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++
Sbjct: 242 YKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLI 301
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQK 357
QD+ L ++LCGST+RAPH CH QYM NM SIASLVM++ +N++++E +T P+
Sbjct: 302 QDDDLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKG 361
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLC
Sbjct: 362 RK-LWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLC 420
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GI TQSPN+MDLVKCDGAAL Y+N+I LG TP++ ++ IV+WL E H
Sbjct: 421 DMLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEITKIVAWLLECHDG 480
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-D 536
STGLS DSL +AGY GA ALG+VVCGMAA++IS K IFWFRS TA E++WGGAKHEP D
Sbjct: 481 STGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
D+GR+MHPRSSF+AFLEVVK RS+PW+D EMDAIHSLQLILR + +D D + +SI
Sbjct: 541 ADDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSI 600
Query: 597 HSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
D KI+G+ EL+ VT+EMVRLIETAT PILAVD+ G +NGWN K+AE+TGL
Sbjct: 601 VEAPSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTT 660
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIG + LVE S++ VK+ML ALQG EEQN++ ++KT + + P+ L+VNAC S
Sbjct: 661 EAIGMLLVDLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCS 720
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDL D VVGVCFVAQD+T K VMDK+TRI+GDY AIV+NPN LIPPIF ++ G C EW
Sbjct: 721 RDLSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEW 780
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM K+TG KRE+ IDKLL+ E+F + CR+K+Q L I++N +SGQ+PEK+
Sbjct: 781 NEAMQKITGIKREDAIDKLLIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLA 840
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
FGFF +GKY E LL NK+ D EG +TG CFL +AS ELQ AL VQ++SEQ A K
Sbjct: 841 FGFFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
L Y +++++NPL+G+ F+RK++E ++L EQ++L ++ CQ QL KIL D+DL+ I
Sbjct: 901 ELTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
Y+++ VEF L E L + Q M S K I + + ++ S LYGD++RLQQVLAD
Sbjct: 961 CYMEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLAD 1020
Query: 1015 FLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+L+ ++ F P G +++ K+ +G + +A+LE R
Sbjct: 1021 YLACTLQFTRPAEGPIVLQVIPKKEHIGSGMQIAHLEFR 1059
>gi|7672696|gb|AAF66603.1|AF141942_1 phytochrome C [Oryza sativa Indica Group]
Length = 1137
Score = 1249 bits (3232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/1060 (56%), Positives = 793/1060 (74%), Gaps = 15/1060 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++R S S++ +S+HSARV+AQT +DA+LHA+FE S FDYS+SV ++ +G
Sbjct: 6 SNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVGAANRSGA---- 61
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+ +AYL ++Q+G+ +QPFGCLLA+ +TF ++AYSENA E+L + HAVP++
Sbjct: 62 -TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQRE 120
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L +G+D++T+F + S ALQKA FG+V+LLNPILVH +TSGKPFYAI+HR+ L+ID
Sbjct: 121 ALAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVID 180
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P ++P+TA GA++SYKLAA+AI RLQSLPSG++ LCD +++EV ELTGYDRVMA
Sbjct: 181 LEPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 240
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++
Sbjct: 241 YKFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKII 300
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQK 357
QD+ L +++CGSTLRAPH CH QYM +M S+ASLVM+V +N++E++ +T P+
Sbjct: 301 QDDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKG 360
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK LWGL+VCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLC
Sbjct: 361 RK-LWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLC 419
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GI TQSPN+MDLVKCDGAAL Y+N++W LG TP++ ++ +IV+WL EYH
Sbjct: 420 DMLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDG 479
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-D 536
STGLS DSL +AGY GA ALGDVVCGMAA++IS KD IFWFRS TA E++WGGAKHEP D
Sbjct: 480 STGLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPID 539
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDV-GTLDLDTKS 595
D+GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D + + KS
Sbjct: 540 ADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKS 599
Query: 596 IHSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
I + D KI+G+ EL VT+EMVRLIETAT PILAVD+ G +NGWN K AELTGL V
Sbjct: 600 IVTAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPV 659
Query: 654 DKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
+AIGK + LV D S++ VK++L ALQG EEQN+Q ++KT + N+ P+ L+VNAC
Sbjct: 660 MEAIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACC 719
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
SRDL + VVGVCFVAQD+T Q +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C E
Sbjct: 720 SRDLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLE 779
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM K+TG KRE+ +DKLL+ EVF + CR+K+ L I++N +SGQDPEK+
Sbjct: 780 WNEAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKL 839
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
FGFF +GKY E L+ K+ D EG +TG CFL +AS ELQ AL VQ++SEQ A+
Sbjct: 840 LFGFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSF 899
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K L Y ++++RNPL+G+ F+R ++E ++L EQ++LL ++ CQ QL KIL D+DL+SI
Sbjct: 900 KELTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIE 959
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
Y ++ V+F L E L + Q M +S K I I + ++ L GD++RLQQVLA
Sbjct: 960 QCYTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGDNLRLQQVLA 1019
Query: 1014 DFLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
DFL+ ++ F P G +++ + +G + +A+LE R
Sbjct: 1020 DFLACTLQFTQPAEGPIVLQVIPRMENIGSGMQIAHLEFR 1059
>gi|51556885|gb|AAU06213.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1249 bits (3232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/1059 (57%), Positives = 791/1059 (74%), Gaps = 13/1059 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++RPA S ++ +S+HS RV+AQT +DA+LHA+FE S FDYS+SV + +G
Sbjct: 6 SNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS--- 62
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+ +AY+ ++Q+G+ IQPFGCLLA+ ++F ++AYSENA E+L + HAVP++
Sbjct: 63 -TSSAVSAYIQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRD 121
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L +G+D++T+F + SA AL KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID
Sbjct: 122 ALAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 181
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMA
Sbjct: 182 LEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 241
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++
Sbjct: 242 YKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLI 301
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQK 357
QD+ L ++LCGST+RAPH CH QYM NM SIASLVM++ +N++++E +T P+
Sbjct: 302 QDDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKG 361
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLC
Sbjct: 362 RK-LWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLC 420
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GI TQSPN+MDLVKCDGAAL Y+N+I LG TP++ ++ IV+WL E H
Sbjct: 421 DMLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDG 480
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-D 536
STGLS DSL +AGY GA ALG+VVCGMAA++IS K IFWFRS TA E++WGGAKHEP D
Sbjct: 481 STGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
D+GR+MHPRSSF+AFLEVVK RS+PW+D EMDAIHSLQLILR + +D D + +SI
Sbjct: 541 ADDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSI 600
Query: 597 HSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
D KI+G+ EL+ VT+EMVRLIETAT PILAVD+ G +NGWN K+AE+TGL
Sbjct: 601 VEAPSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTT 660
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIG + LVE S++ VK+ML ALQG EEQN++ ++KT + + P+ L+VNAC S
Sbjct: 661 EAIGMLLVDLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCS 720
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDL D VVGVCFVAQD+T K VMDK+TRI+GDY AIV+NPN LIPPIF ++ G C EW
Sbjct: 721 RDLSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEW 780
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM K+TG KRE+ IDKLL+ E+F + CR+K+Q L I++N +SGQ+PEK+
Sbjct: 781 NEAMQKITGIKREDAIDKLLIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLA 840
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
FGFF +GKY E LL NK+ D EG +TG CFL +AS ELQ AL VQ++SEQ A K
Sbjct: 841 FGFFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
L Y +++++NPL+G+ F+RK++E ++L EQ++L ++ CQ QL KIL D+DL+ I
Sbjct: 901 ELTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
Y+++ VEF L E L + Q M S K I + + ++ S LYGD++RLQQVLAD
Sbjct: 961 CYMEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLAD 1020
Query: 1015 FLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+L+ ++ F P G +++ K+ +G + +A+LE R
Sbjct: 1021 YLACTLQFTRPAEGPIVLQVIPKKEHIGSGMQIAHLEFR 1059
>gi|327241180|gb|AEA40434.1| phytochrome A type 2 [Triticum aestivum]
Length = 889
Score = 1248 bits (3228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/866 (67%), Positives = 715/866 (82%), Gaps = 19/866 (2%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVS-STAGGDQQPRSDRVTTAYLHHIQKGKL 79
RV+AQTT+DA+L+A+FE S SFDYS V T Q+ RS++V AYL HIQ+GK+
Sbjct: 21 RVLAQTTLDAQLNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVI-AYLQHIQRGKM 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQ FGCLLALDEK+F VIA+SENAPE+LT V+HAVPSV D P L IG++++++FT A+
Sbjct: 80 IQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVNDPPRLDIGTNVRSLFTDQGAT 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L +DFEPV P E P +AAGALQ
Sbjct: 140 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLAVDFEPVNPTEFPASAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++Q+LP GS+E LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 200 SYKLAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI D R+R +KV++DE LPFD++LCGS LRA
Sbjct: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRSRSIKVIEDEALPFDISLCGSALRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLP---QKRKRLWGLVVCHNTTPRF 374
HSCHLQYMENMNSIASLVMAVVVN+ EE+ + + P QK+K LWGLVVCH+ +PR+
Sbjct: 320 AHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCHHESPRY 379
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
PFPLRYACEFLAQVFA+HVNKE E++ Q+ EK+ILRTQT+L DML ++A PL IV+ +P
Sbjct: 380 APFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRTQTILSDMLFKEASPLTIVSGAP 439
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDL+KCDGAALLY +K+WRLG P + Q+ D+ WLSE HMDSTGLS +SL+DAGY G
Sbjct: 440 NIMDLIKCDGAALLYGDKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLHDAGYPG 499
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A ALGD VCGMA +I+ D++FWFRS TA E+RWGGAK++P ++DD R+MHPR SFKAF
Sbjct: 500 ASALGDSVCGMAVAKINSSDILFWFRSHTAQEIRWGGAKNDPSDQDDSRRMHPRLSFKAF 559
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK-----SIHSKLCDLKIEGM 608
LEVVK +SL W D EMDAIHSLQLILR GT+D K S+ ++ DLK++G+
Sbjct: 560 LEVVKMKSLAWTDSEMDAIHSLQLILR------GTVDGVVKPTGKASLDEQIGDLKLDGL 613
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL+AVTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVE+S
Sbjct: 614 AELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEES 673
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S+ V+RMLYLALQG+EE+ ++FE+KTHG K +D P+ L+VNACASRDLHD+VVGVCFVA
Sbjct: 674 SVSVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVA 733
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T K VMDKFTR+EGDY AI+ NPNPLIPPIFG+DEFGWCCEWN AM KLTGW REE
Sbjct: 734 QDVTVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHREE 793
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECL 848
V++K+LL EVF ++ A C LKN++AFV+L +V+N A++G++ EK PFGFF R+GKY +CL
Sbjct: 794 VLNKMLLGEVFDSSNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTDCL 853
Query: 849 LCVNKKLDREGAVTGVFCFLQLASHE 874
L VN++ + G +TGVFCF+ + SHE
Sbjct: 854 LSVNRRENEGGLITGVFCFIHIPSHE 879
>gi|115455391|ref|NP_001051296.1| Os03g0752100 [Oryza sativa Japonica Group]
gi|122246759|sp|Q10CQ8.1|PHYC_ORYSJ RecName: Full=Phytochrome C
gi|21070927|gb|AAM34402.1|AF377947_8 phytochrome C [Oryza sativa Japonica Group]
gi|4190974|dbj|BAA74448.1| phytochrome C [Oryza sativa Japonica Group]
gi|31712054|gb|AAP68360.1| phytochrome C [Oryza sativa Japonica Group]
gi|40538982|gb|AAR87239.1| phytochrome C [Oryza sativa Japonica Group]
gi|108711120|gb|ABF98915.1| Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
gi|113549767|dbj|BAF13210.1| Os03g0752100 [Oryza sativa Japonica Group]
gi|125587941|gb|EAZ28605.1| hypothetical protein OsJ_12592 [Oryza sativa Japonica Group]
Length = 1137
Score = 1248 bits (3228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/1060 (56%), Positives = 792/1060 (74%), Gaps = 15/1060 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++R S S++ +S+HSARV+AQT +DA+LHA+FE S FDYS+SV ++ +G
Sbjct: 6 SNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVGAANRSGA---- 61
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+ +AYL ++Q+G+ +QPFGCLLA+ +TF ++AYSENA E+L + HAVP++
Sbjct: 62 -TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQRE 120
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L +G+D++T+F + S ALQKA FG+V+LLNPILVH +TSGKPFYAI+HR+ L+ID
Sbjct: 121 ALAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVID 180
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P ++P+TA GA++SYKLAA+AI RLQSLPSG++ LCD +++EV ELTGYDRVMA
Sbjct: 181 LEPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 240
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++
Sbjct: 241 YKFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKII 300
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQK 357
QD+ L +++CGSTLRAPH CH QYM +M S+ASLVM+V +N++E++ +T P+
Sbjct: 301 QDDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKG 360
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK LWGL+VCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLC
Sbjct: 361 RK-LWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLC 419
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GI TQSPN+MDLVKCDGAAL Y+N++W LG TP++ ++ +IV+WL EYH
Sbjct: 420 DMLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDG 479
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-D 536
STGLS DSL +AGY GA ALGDVVCGMAA++IS KD IFWFRS TA E++WGGAKHEP D
Sbjct: 480 STGLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPID 539
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDV-GTLDLDTKS 595
D+GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D + + KS
Sbjct: 540 ADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKS 599
Query: 596 IHSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
I + D KI+G+ EL VT+EMVRLIETAT PILAVD+ G +NGWN K AELTGL V
Sbjct: 600 IVTAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPV 659
Query: 654 DKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
+AIGK + LV D S++ VK++L ALQG EEQN+Q ++KT + N+ P+ L+VNAC
Sbjct: 660 MEAIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACC 719
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
SRDL + VVGVCFVAQD+T Q +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C E
Sbjct: 720 SRDLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLE 779
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM K+TG KRE+ +DKLL+ EVF + CR+K+ L I++N +SGQDPEK+
Sbjct: 780 WNEAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKL 839
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
FGFF +GKY E L+ K+ D EG +TG CFL +AS ELQ AL VQ++SEQ A+
Sbjct: 840 LFGFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSF 899
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K L Y ++++RNPL+G+ F+R ++E ++L EQ++LL ++ CQ QL KIL D+DL+SI
Sbjct: 900 KELTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIE 959
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
Y ++ V+F L E L + Q M +S K I I + ++ L GD++RLQQVLA
Sbjct: 960 QCYTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGDNLRLQQVLA 1019
Query: 1014 DFLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
DFL+ + F P G +++ + +G + +A+LE R
Sbjct: 1020 DFLACMLQFTQPAEGPIVLQVIPRMENIGSGMQIAHLEFR 1059
>gi|119926110|emb|CAC82798.2| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1248 bits (3228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/1059 (57%), Positives = 791/1059 (74%), Gaps = 13/1059 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++RPA S ++ +S+HS RV+AQT +DA+LHA+FE S FDYS+SV + +G
Sbjct: 6 SNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS--- 62
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+ +AY+ ++Q+G+ IQPFGCLLA+ ++F ++AYSENA E+L + HAVP++
Sbjct: 63 -TSSAVSAYIQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRD 121
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L +G+D++T+F + SA AL KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID
Sbjct: 122 ALAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 181
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMA
Sbjct: 182 LEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 241
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++
Sbjct: 242 YKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLI 301
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQK 357
QD+ L ++LCGST+RAPH CH QYM NM SIASLVM++ +N++++E +T P+
Sbjct: 302 QDDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKG 361
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLC
Sbjct: 362 RK-LWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLC 420
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GI TQSPN+MDLVKCDGAAL Y+N+I LG TP++ ++ IV+WL E H
Sbjct: 421 DMLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDG 480
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-D 536
STGLS DSL +AGY GA ALG+VVCGMAA++IS K IFWFRS TA E++WGGAKHEP D
Sbjct: 481 STGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
D+GR+MHPRSSF+AFLEVVK RS+PW+D EMDAIHSLQLILR + +D D + +SI
Sbjct: 541 ADDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSI 600
Query: 597 HSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
D KI+G+ EL+ VT+EMVRLIETAT PILAVD+ G +NGWN K+AE+TGL
Sbjct: 601 VEAPSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTT 660
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIG + LVE S++ VK+ML ALQG EEQN++ ++KT + + P+ L+VNAC S
Sbjct: 661 EAIGMLLVDLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCS 720
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDL D VVGVCFVAQD+T K VMDK+TRI+GDY AIV+NPN LIPPIF ++ G C EW
Sbjct: 721 RDLSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEW 780
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM K+TG KRE+ IDKL++ E+F + CR+K+Q L I++N +SGQ+PEK+
Sbjct: 781 NEAMQKITGIKREDAIDKLVIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLA 840
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
FGFF +GKY E LL NK+ D EG +TG CFL +AS ELQ AL VQ++SEQ A K
Sbjct: 841 FGFFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
L Y +++++NPL+G+ F+RK++E ++L EQ++L ++ CQ QL KIL D+DL+ I
Sbjct: 901 ELTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
Y+++ VEF L E L + Q M S K I + + ++ S LYGD++RLQQVLAD
Sbjct: 961 CYMEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLAD 1020
Query: 1015 FLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+L+ ++ F P G +++ K+ +G + +A+LE R
Sbjct: 1021 YLACTLQFTRPAEGPIVLQVIPKKEHIGSGMQIAHLEFR 1059
>gi|51556877|gb|AAU06209.1| phytochrome C [Triticum spelta]
Length = 1139
Score = 1246 bits (3225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/1059 (57%), Positives = 791/1059 (74%), Gaps = 13/1059 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++RPA S ++ +S+HS RV+AQT +DA+LHA+FE S FDYS+SV + +G
Sbjct: 6 SNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS--- 62
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+ +AYL ++Q+G+ IQPFGCLLA+ ++F ++AY+ENA E+L + HAVP++
Sbjct: 63 -TSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYNENAAEILDLTPHAVPTIDQRD 121
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L +G+D++T+F + SA AL KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID
Sbjct: 122 ALAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 181
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMA
Sbjct: 182 LEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 241
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++
Sbjct: 242 YKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLI 301
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQK 357
QD+ L ++LCGST+RAPH CH QYM NM SIASLVM++ +N++++E +T P+
Sbjct: 302 QDDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKG 361
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLC
Sbjct: 362 RK-LWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLC 420
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GI TQSPN+MDLVKCDGAAL Y+N+I LG TP++ ++ IV+WL E H
Sbjct: 421 DMLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDG 480
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-D 536
STGLS DSL +AGY GA ALG+VVCGMAA++IS K IFWFRS TA E++WGGAKHEP D
Sbjct: 481 STGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
D+GR+MHPRSSF+AFLEVVK RS+PW+D EMDAIHSLQLILR + +D D + +SI
Sbjct: 541 ADDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSI 600
Query: 597 HSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
D KI+G+ EL+ VT+EMVRLIETAT PILAVD+ G ++GWN K+AE+TGL
Sbjct: 601 VEAPSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNISGWNNKVAEITGLPTT 660
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIG + LVE S++ VK+ML ALQG EEQN++ ++KT + + P+ L+VNAC S
Sbjct: 661 EAIGMLLVDLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTMHQQESKGPVVLMVNACCS 720
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDL D VVGVCFVAQD+T K VMDK+TRI+GDY AIV+NPN LIPPIF ++ G C EW
Sbjct: 721 RDLSDKVVGVCFVAQDLTGHKMVMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEW 780
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM K+TG KRE+ IDKLL+ E+F + CR+K+Q L I++N +SGQ+PEK+
Sbjct: 781 NEAMQKITGIKREDAIDKLLIGELFTLHDYGCRVKDQVTLTKLSILMNTVISGQEPEKLA 840
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
FGFF +GKY E LL NK+ D EG +TG CFL +AS ELQ AL VQ++SEQ A K
Sbjct: 841 FGFFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
L Y +++++NPL+G+ F+RK++E ++L EQ++L ++ CQ QL KIL D+DL+ I
Sbjct: 901 ELTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
Y+++ VEF L E L + Q M S K I + + ++ S LYGD++RLQQVLAD
Sbjct: 961 CYMEMNTVEFNLEEALNTVLMQGMSVSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLAD 1020
Query: 1015 FLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+L+ ++ F P G +++ K+ +G + +A+LE R
Sbjct: 1021 YLACTLQFTRPAEGPIVLQVIPKKEHIGSGMQIAHLEFR 1059
>gi|224285845|gb|ACN40636.1| unknown [Picea sitchensis]
Length = 1132
Score = 1244 bits (3219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/1070 (56%), Positives = 788/1070 (73%), Gaps = 32/1070 (2%)
Query: 2 SSSRPAQSSSNTGKSRHS----------ARVIAQTTIDAKLHADFETSG---TSFDYSNS 48
S+SR QS S +R S A +AQ DA+L FE SG SFDY+ S
Sbjct: 3 SNSRHTQSQSTGSNNRRSSINTNTTTNKATAMAQYNADARLLQVFEQSGESGKSFDYTRS 62
Query: 49 VRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLT 108
++ ++ + +QQ TAYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L
Sbjct: 63 IKSTTESVPEQQ------ITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLD 116
Query: 109 MVNHAVPSVGDHP---VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGK 165
+ +VPS+ + P VL IG+D++T+FTA SA +L+KA E+SL+NPI VHCK S K
Sbjct: 117 LAPQSVPSM-EQPQLEVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRK 175
Query: 166 PFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT 225
PFYAIVHR+ ++IDFEP+K + ++AAGA+QS KLA +AI+RLQSLP G +E LCD+
Sbjct: 176 PFYAIVHRIDVGMVIDFEPLKTGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDS 235
Query: 226 MIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKN 285
+++ V ELTGYDRVM YKFHED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N
Sbjct: 236 VVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQN 295
Query: 286 KVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVND 345
+VRMI DC A V+V+Q E+L L L GSTLRAPH CH QYM NM SIASLVMAV++N
Sbjct: 296 RVRMICDCMATPVQVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIING 355
Query: 346 EEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQIL 405
++EG + + +LWGLVVCH+T+PR VPFPLRYACEF+ Q F + +N EL+L Q+
Sbjct: 356 NDDEGAGS-GRNSMKLWGLVVCHHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLT 414
Query: 406 EKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLH 465
EK+ILRTQTLLCDML+RDAP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+
Sbjct: 415 EKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIK 474
Query: 466 DIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASE 525
DI WL E+H DSTGLS DSL DAGY GA +LGD VCGMA+ RI+ KD +FWFRS TA E
Sbjct: 475 DIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKE 534
Query: 526 VRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD 585
++WGGAKH PD+KDDGR+MHPRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D
Sbjct: 535 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQD 594
Query: 586 VGTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTK 644
+ D TK+ +HS+L DL+++G+ EL +V SEMVRLIETAT PILAVD +GLVN WN K
Sbjct: 595 ID--DSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNVWNAK 652
Query: 645 IAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDD 703
+AELTGL V +A+G + LV + S++ VK+ML A++G+EE+N++ ++T G + +
Sbjct: 653 VAELTGLPVGEAMGMSLVQDLVFEESVERVKKMLCNAIRGEEEKNVEMILRTFGPQKQKE 712
Query: 704 PITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIF 763
+ L+VNAC+SRD +N+VGVCFV QD+T QK VMDKF RI+GDY++IVQNPNPLIPPIF
Sbjct: 713 AVFLVVNACSSRDFTNNIVGVCFVGQDVTGQKVVMDKFIRIQGDYRSIVQNPNPLIPPIF 772
Query: 764 GSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNK 823
SDE C EWN AM +TGW R+EVI K+L+ E+FG CCRLK Q+A IVL+
Sbjct: 773 ASDESACCSEWNAAMENVTGWARDEVIGKMLVGEIFG---GCCRLKGQDAVTKFTIVLHS 829
Query: 824 AMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQR 883
A+ G + EK PF FF + GKY E LL NK+ D +G +TG FCFLQ+AS EL+QAL VQR
Sbjct: 830 AIDGHEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSELRQALEVQR 889
Query: 884 LSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKI 943
E+ RLK LAY +++I+NPL G++F+RK++E T+L +QK+ + TSA C+RQ+ K+
Sbjct: 890 QQEKKCFARLKELAYIRQEIKNPLYGMMFTRKLLEETDLSDDQKQFVETSAVCERQMQKV 949
Query: 944 LDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYG 1003
+DD DLDS+ DGY++L+ EF L V+ A +SQ M+ KG++++ E ++ + LYG
Sbjct: 950 IDDMDLDSLEDGYMELDTAEFILGTVIDAVVSQGMIILREKGLQLIREIPGEVKTMHLYG 1009
Query: 1004 DSIRLQQVLADFLSISINFVPN-GGQLMVSSSLTKDQLGQSVHLAYLELR 1052
D +RLQQ+LADFL ++ F P+ G + + T QL ++H+ LE R
Sbjct: 1010 DQVRLQQILADFLLNALRFTPSPEGWVAIKVLPTLKQLSGALHVVLLEFR 1059
>gi|158513185|sp|A2XM23.2|PHYC_ORYSI RecName: Full=Phytochrome C
Length = 1137
Score = 1243 bits (3217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/1060 (56%), Positives = 791/1060 (74%), Gaps = 15/1060 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++R S S++ +S+HSARV+AQT +DA+LHA+FE S FDYS+SV ++ +G
Sbjct: 6 SNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVGAANRSGA---- 61
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+ +AYL ++Q+G+ +QPFGCLLA+ +TF ++AYSENA E+L + HAVP++
Sbjct: 62 -TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQRE 120
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L +G+D++T+F + S ALQKA FG+V+LLNPILVH +TSGKPFYAI+HR+ L+ID
Sbjct: 121 ALAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVID 180
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P ++P+TA GA++SYKLAA+AI RLQSLPSG++ LCD +++EV ELTGYDRVMA
Sbjct: 181 LEPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 240
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++
Sbjct: 241 YKFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKII 300
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQK 357
QD+ L +++CGSTLRAPH CH QYM +M S+ASLVM+V +N++E++ +T P+
Sbjct: 301 QDDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKG 360
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK LWGL+VCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLC
Sbjct: 361 RK-LWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLC 419
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GI TQSPN+MDLVKCDGAAL Y+N++W LG TP++ ++ +IV+WL EYH
Sbjct: 420 DMLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDG 479
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-D 536
STGLS DSL +AGY GA ALGDVV GMAA++IS KD IFWFRS TA E++WGGAKHEP D
Sbjct: 480 STGLSTDSLVEAGYPGAAALGDVVYGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPID 539
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDV-GTLDLDTKS 595
D+GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D + + KS
Sbjct: 540 ADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKS 599
Query: 596 IHSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
I + D KI+G+ EL VT+EMVRLIETAT PILAVD+ G +NGWN K AELTGL V
Sbjct: 600 IVTAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPV 659
Query: 654 DKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
+AIGK + LV D S++ VK++L ALQG EEQN+Q ++KT + N+ P+ L+VNAC
Sbjct: 660 MEAIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACC 719
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
SRDL + VVGVCFVAQD+T Q +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C E
Sbjct: 720 SRDLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLE 779
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM K+TG KRE+ +DKLL+ EVF + CR+K+ L I++N +SGQDPEK+
Sbjct: 780 WNEAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKL 839
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
FGFF +GKY E L+ K+ D EG +TG CFL +AS ELQ AL VQ++SEQ A+
Sbjct: 840 LFGFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSF 899
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K L Y ++++RNPL+G+ F+R ++E ++L EQ++LL ++ CQ QL KIL D+DL+SI
Sbjct: 900 KELTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIE 959
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
Y ++ V+F L E L + Q M +S K I I + ++ L GD++RLQQVLA
Sbjct: 960 QCYTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGDNLRLQQVLA 1019
Query: 1014 DFLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
DFL+ + F P G +++ + +G + +A+LE R
Sbjct: 1020 DFLACMLQFTQPAEGPIVLQVIPRMENIGSGMQIAHLEFR 1059
>gi|51556887|gb|AAU06214.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1243 bits (3216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/1059 (57%), Positives = 787/1059 (74%), Gaps = 13/1059 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++RPA S ++ +S+HS RV+AQT +DA+LHA+FE S FDYS+SV + +G
Sbjct: 6 SNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS--- 62
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+ +AYL ++Q+G+ IQPFGCLLA+ ++F ++AYSENA E+L + HAVP++
Sbjct: 63 -TSSAVSAYLQNMQRGRYIQPFGCLLAIHSESFALLAYSENAAEMLDLTPHAVPTIDQRD 121
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L +G+D++T+F + SA AL KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID
Sbjct: 122 ALAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 181
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMA
Sbjct: 182 LEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 241
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++
Sbjct: 242 YKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLI 301
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQK 357
QD+ L ++LCGST+RAPH CH QYM NM SIASLVM++ +N++++E +T P+
Sbjct: 302 QDDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKG 361
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLC
Sbjct: 362 RK-LWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLC 420
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GI TQSPN+MDLVKCDGAAL Y+N+I LG TP++ ++ IV+WL E H
Sbjct: 421 DMLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDG 480
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-D 536
STGLS DSL +AGY GA ALG+VVCGMAA++IS K IFWFRS TA E++WGGAK EP D
Sbjct: 481 STGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKQEPGD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
D+GR+MHPRSSF+AFLEVVK RS+PW+D EMDAIHSLQLILR + +D D + SI
Sbjct: 541 ADDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDATDNNAGSI 600
Query: 597 HSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
D KI+G+ EL VT+EMVRLIETAT PILAVD+ G +NGWN K+AE+TGL
Sbjct: 601 VEAPSDDIKKIQGLLELRIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTT 660
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIG + LVE S++ VK+ML ALQG EEQN++ ++KT + + P+ L+VNAC S
Sbjct: 661 EAIGMLLVDLVEGDSVEVVKQMLNSALQGTEEQNLEIKLKTFHQQESKGPVVLMVNACCS 720
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDL + VVGVC VAQD+T K +MDK+TRI+GDY AIV+NPN LIPPIF ++ G C EW
Sbjct: 721 RDLSEKVVGVCLVAQDLTGHKMIMDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEW 780
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM K+TG KRE+ IDKLL+ EVF + CR+K+Q L I++N +SGQ+PEK+
Sbjct: 781 NEAMQKITGIKREDAIDKLLIGEVFTLHDYGCRVKDQATLTKLSILMNTVISGQEPEKLA 840
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
FGFF +GKY E LL NK+ D EG +TG CFL +AS ELQ AL VQ++SEQ A K
Sbjct: 841 FGFFNTDGKYMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
L Y +++++NPL+G+ F+RK++E ++L EQ++L ++ CQ QL KIL D+DL+ I
Sbjct: 901 ELTYIRQELKNPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQ 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
Y+++ VEF L E L + Q M S K I + + ++ S LYGD++RLQQVLAD
Sbjct: 961 CYMEMNAVEFNLEEALNTVLMQGMSLSKEKQISLDRDWPVEVSSIYLYGDNLRLQQVLAD 1020
Query: 1015 FLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+L+ ++ F P G +++ K+ +G + +A+LE R
Sbjct: 1021 YLACTLQFTRPAEGPIVLQVIPKKEHIGSGMQIAHLEFR 1059
>gi|357115337|ref|XP_003559446.1| PREDICTED: phytochrome C-like [Brachypodium distachyon]
Length = 1140
Score = 1242 bits (3213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/1059 (56%), Positives = 784/1059 (74%), Gaps = 12/1059 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++R S ++ +S+HS RV+AQT +DA+LHA+FE S FDYS+SV ++ +G
Sbjct: 6 SNNRATCSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRRFDYSSSVSAANRSGAS--- 62
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+ +AYL ++Q+G+ IQPFGCLLA +TF ++AYSENA E+L + HAVP++
Sbjct: 63 -TSTAVSAYLQNMQRGRYIQPFGCLLAAHPETFALLAYSENAAEMLDLTPHAVPTIDQRD 121
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L +G D++T+F + SA AL KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID
Sbjct: 122 ALTVGVDVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 181
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMA
Sbjct: 182 LEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 241
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++
Sbjct: 242 YKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAAVPVKLI 301
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN-DEEEEGDNTLPQ--KR 358
QD+ L ++LCGST+RAPH CH QYM NM S+ASLVM++ +N DEEE+GD Q K
Sbjct: 302 QDDNLSQPISLCGSTMRAPHGCHAQYMANMGSVASLVMSITINEDEEEDGDTGSDQQPKG 361
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
++LWGLVVCH+++PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLCD
Sbjct: 362 RKLWGLVVCHHSSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCD 421
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
ML+RDAP+GI TQSPN+MDLVKCDGAAL Y+N+I LG TP++ ++ +IV+WL EYH S
Sbjct: 422 MLLRDAPIGIFTQSPNVMDLVKCDGAALCYRNQIMVLGSTPSEGEIKNIVAWLQEYHDGS 481
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DE 537
TGLS DSL +AGY GA ALG++VCGMAA++IS K I WFRS TA E++WGGAKHEP D
Sbjct: 482 TGLSTDSLVEAGYPGASALGEIVCGMAAIKISSKGFILWFRSHTAKEIKWGGAKHEPGDA 541
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDV-GTLDLDTKSI 596
D+GRKMHPRSSF+AFLEVVK RS+PW+D EMDAIHSLQLILR + +D + + SI
Sbjct: 542 DDNGRKMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANNNNNVMSI 601
Query: 597 HSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
D KI+G+ EL VT+EMVRLIETAT PILAVD+ G +NGWN K AE+TGL
Sbjct: 602 VEAPSDDMKKIQGLLELRIVTNEMVRLIETATAPILAVDIVGNINGWNNKAAEITGLPTT 661
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIG + +V S++ V ++L ALQG EEQN++ ++KT ++ P+ L+VNAC S
Sbjct: 662 EAIGMPLVQVVHGDSVEVVTQILNSALQGVEEQNLEIKLKTFHHLESNGPVILMVNACCS 721
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDL + VVGVCFVAQD+T QK ++DK+TRI+GDY AIV+NPN LIPPIF ++ G C EW
Sbjct: 722 RDLSEKVVGVCFVAQDLTGQKMILDKYTRIQGDYVAIVKNPNELIPPIFMINDLGSCLEW 781
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM ++TG KRE+ IDKLL+ EVF + CR+K+ L I++N +SGQDPEK+P
Sbjct: 782 NEAMQRITGIKREDAIDKLLIGEVFTLHDYGCRVKDHATLTKLSILMNTVISGQDPEKLP 841
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
FGFF +GK E LL NK+ D EG +TG CFL +AS ELQ AL VQ++SEQ A K
Sbjct: 842 FGFFDADGKCMESLLTANKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATHSFK 901
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
L Y +++++NPL+G+ F+R ++E +EL EQ++LL ++ CQ QL KIL D+DL+ I
Sbjct: 902 ELTYIRQELKNPLNGMQFTRNLLEPSELTEEQRQLLASNVLCQEQLKKILHDNDLEGIEQ 961
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
Y+++ VEF L E L + Q M S K I + + ++ S LYGD++RLQQVLAD
Sbjct: 962 CYMEMNTVEFNLEEALNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLAD 1021
Query: 1015 FLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL+ ++ F P G +++ K+ +G + +A+LE R
Sbjct: 1022 FLACTLQFTQPAEGPIVLQVIPRKESIGSGMQIAHLEFR 1060
>gi|82491942|gb|ABB77851.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1147
Score = 1233 bits (3190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1049 (57%), Positives = 781/1049 (74%), Gaps = 13/1049 (1%)
Query: 12 NTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYL 71
++ +SRHS RV+AQT +DA+LHA+FE+S FDYS+SV + +G + +A+L
Sbjct: 16 SSARSRHSERVVAQTPVDAQLHAEFESSHRHFDYSSSVSALNRSGAS----TSSAVSAFL 71
Query: 72 HHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKT 131
++Q+G+ IQPFGCLLA+ ++F ++AYSENA E+L + HAVP++ L +G+D++T
Sbjct: 72 QNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRT 131
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F + SA AL KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID EPV P +VP
Sbjct: 132 LFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVP 191
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMAYKFHED+HGE
Sbjct: 192 VTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGE 251
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
V++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++QD L ++
Sbjct: 252 VIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPIS 311
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQKRKRLWGLVVC 367
LCGST+RAPH CH QYM NM SIASLVM+V VN++++E +T P+ RK LWGLVVC
Sbjct: 312 LCGSTMRAPHGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRK-LWGLVVC 370
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLCDML+RDAP+G
Sbjct: 371 HHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVG 430
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
I TQSPN+MDLVKCDGAAL Y+N+I LG P++ ++ I +WL E H STGLS DSL
Sbjct: 431 IFTQSPNVMDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLL 490
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DEKDDGRKMHP 546
+AGY GA ALG+VVCGMAA++IS K IFWFRS TA E++W GAKHEP D D+GR+MHP
Sbjct: 491 EAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHP 550
Query: 547 RSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD--LK 604
RSSF+AFLEVVK RS+PW+D EMDAIHSLQLILR + +D D + +SI D K
Sbjct: 551 RSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRK 610
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTL 664
I+G+ EL VT+EMVRLIETAT PILAVD+ G +NGWN K+AE+TGL +AIG + L
Sbjct: 611 IQGLLELRIVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVDL 670
Query: 665 VEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGV 724
VE S++ +K+ML A+QG EEQN + ++KT + ++ P+ L+VNAC SRDL D VVGV
Sbjct: 671 VEGDSVEVIKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGV 730
Query: 725 CFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGW 784
CFVAQD+T K VMDK+T+I+GDY AIV+NPN LIPPIF ++ G C EWN AM K+TG
Sbjct: 731 CFVAQDLTGHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGI 790
Query: 785 KREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKY 844
KRE+ IDKLL+ EVF + CR+K+Q L I++N +SGQ+PEK+ FGFF+ +GKY
Sbjct: 791 KREDAIDKLLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKY 850
Query: 845 AECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIR 904
E LL NK+ D EG +TG CFL + S ELQ AL VQ++SEQ A + K L Y +++++
Sbjct: 851 MESLLTANKRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELK 910
Query: 905 NPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEF 964
NPL+G+ F+RK++E ++L EQ++L ++ CQ QL KIL D+DL+ I Y+++ VEF
Sbjct: 911 NPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCYMEMNTVEF 970
Query: 965 TLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV- 1023
L E L + Q M S K I + + ++ S LYGD++RLQQVLAD+L+ ++ F
Sbjct: 971 NLEEALNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYLACTLQFTR 1030
Query: 1024 PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
P G +++ K+ +G + +A+LE R
Sbjct: 1031 PAEGPIVLQVIPKKEHIGSGMQIAHLEFR 1059
>gi|77963970|gb|ABB13327.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1139
Score = 1233 bits (3189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1049 (57%), Positives = 781/1049 (74%), Gaps = 13/1049 (1%)
Query: 12 NTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYL 71
++ +SRHS RV+AQT +DA+LHA+FE+S FDYS+SV + +G + +A+L
Sbjct: 16 SSARSRHSERVVAQTPVDAQLHAEFESSHRHFDYSSSVSALNRSGAS----TSSAVSAFL 71
Query: 72 HHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKT 131
++Q+G+ IQPFGCLLA+ ++F ++AYSENA E+L + HAVP++ L +G+D++T
Sbjct: 72 QNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRT 131
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F + SA AL KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID EPV P +VP
Sbjct: 132 LFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVP 191
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMAYKFHED+HGE
Sbjct: 192 VTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGE 251
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
V++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++QD L ++
Sbjct: 252 VIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPIS 311
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQKRKRLWGLVVC 367
LCGST+RAPH CH QYM NM SIASLVM+V VN++++E +T P+ RK LWGLVVC
Sbjct: 312 LCGSTMRAPHGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRK-LWGLVVC 370
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLCDML+RDAP+G
Sbjct: 371 HHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVG 430
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
I TQSPN+MDLVKCDGAAL Y+N+I LG P++ ++ I +WL E H STGLS DSL
Sbjct: 431 IFTQSPNVMDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLL 490
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DEKDDGRKMHP 546
+AGY GA ALG+VVCGMAA++IS K IFWFRS TA E++W GAKHEP D D+GR+MHP
Sbjct: 491 EAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHP 550
Query: 547 RSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD--LK 604
RSSF+AFLEVVK RS+PW+D EMDAIHSLQLILR + +D D + +SI D K
Sbjct: 551 RSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRK 610
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTL 664
I+G+ EL VT+EMVRLIETAT PILAVD+ G +NGWN K+AE+TGL +AIG + L
Sbjct: 611 IQGLLELRIVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVDL 670
Query: 665 VEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGV 724
VE S++ +K+ML A+QG EEQN + ++KT + ++ P+ L+VNAC SRDL D VVGV
Sbjct: 671 VEGDSVEVIKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGV 730
Query: 725 CFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGW 784
CFVAQD+T K VMDK+T+I+GDY AIV+NPN LIPPIF ++ G C EWN AM K+TG
Sbjct: 731 CFVAQDLTGHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGI 790
Query: 785 KREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKY 844
KRE+ IDKLL+ EVF + CR+K+Q L I++N +SGQ+PEK+ FGFF+ +GKY
Sbjct: 791 KREDAIDKLLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKY 850
Query: 845 AECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIR 904
E LL NK+ D EG +TG CFL + S ELQ AL VQ++SEQ A + K L Y +++++
Sbjct: 851 MESLLTANKRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELK 910
Query: 905 NPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEF 964
NPL+G+ F+RK++E ++L EQ++L ++ CQ QL KIL D+DL+ I Y+++ VEF
Sbjct: 911 NPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCYMEMNTVEF 970
Query: 965 TLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV- 1023
L E L + Q M S K I + + ++ S LYGD++RLQQVLAD+L+ ++ F
Sbjct: 971 NLEEALNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYLACTLQFTR 1030
Query: 1024 PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
P G +++ K+ +G + +A+LE R
Sbjct: 1031 PAEGPIVLQVIPKKEHIGSGMQIAHLEFR 1059
>gi|37926897|gb|AAP06790.1| phytochrome C1 apoprotein [Zea mays]
gi|414872852|tpg|DAA51409.1| TPA: phytochromeC1 [Zea mays]
Length = 1135
Score = 1232 bits (3188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/1059 (57%), Positives = 779/1059 (73%), Gaps = 14/1059 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++R S S++ +S+HSARV+AQT +DA+LHA+FE S FDYS+SV G +P
Sbjct: 5 SNNRRTCSRSSSARSKHSARVVAQTPVDAQLHAEFEGSQRHFDYSSSV------GAANRP 58
Query: 62 RSDRVT-TAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
+ T + YL ++Q+G+ IQPFGCLLA+ TF ++AYSENAPE+L + HAVP++
Sbjct: 59 SASTSTVSTYLQNMQRGRYIQPFGCLLAVHPDTFALLAYSENAPEMLDLTPHAVPTIDQR 118
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
LGIG D++T+F + S+ AL KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+I
Sbjct: 119 DALGIGVDVRTLFRSQSSVALHKAAAFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVI 178
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVM
Sbjct: 179 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVM 238
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKF+ED+HGEV+SE +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VKV
Sbjct: 239 AYKFYEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCCATPVKV 298
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN-DEEEEGDNTLPQ--K 357
+QD+ L L+LCGSTLRA H CH QYM NM S+ASL M+V +N DEEE+GD Q K
Sbjct: 299 IQDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLAMSVTINEDEEEDGDTGSDQQPK 358
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLC
Sbjct: 359 GRKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLC 418
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GI T+SPN+MDLVKCDGAAL Y+N++ LG TP++ ++ I +WL + H
Sbjct: 419 DMLLRDAPVGIFTRSPNVMDLVKCDGAALYYQNQLLVLGSTPSESEIKSIATWLQDNHDG 478
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-D 536
STGLS DSL +AGY GA+AL +VVCGMAA++IS KD IFWFRS T E++WGGAKHEP D
Sbjct: 479 STGLSTDSLVEAGYPGAVALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVD 538
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
DDGR+MHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + D + +SI
Sbjct: 539 ADDDGRRMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLPDEDANRNNVRSI 598
Query: 597 HSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
D KI+G+ EL VT+EMVRLIETAT P+LAVD+ G +NGWN K AELTGL V
Sbjct: 599 VKAPSDDMKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVM 658
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIG+ + LV SI+ VK++L ALQG EEQN++ ++KT + P+ L VN+C S
Sbjct: 659 EAIGRPLIDLVVTDSIEVVKQILDSALQGIEEQNMEIKLKTFHEHECNGPVILKVNSCCS 718
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDL + V+GVCFVAQD+T QK +MDK+TRI+GDY AIV+NP LIPPIF ++ G C EW
Sbjct: 719 RDLSEKVIGVCFVAQDLTRQKMIMDKYTRIQGDYVAIVKNPTELIPPIFMINDLGSCLEW 778
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM K+TG KRE+ I+KLL+ EVF + CR+K+ L I++N +SGQDPEK+
Sbjct: 779 NKAMQKITGIKREDAINKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLF 838
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
FGFF +GKY E LL VNK+ D EG +TG CFL +AS ELQ AL VQ++SEQ A K
Sbjct: 839 FGFFDTDGKYIESLLTVNKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAATNSFK 898
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
L Y ++++RNPL+G+ F+ +++ +EL EQ++LL ++ CQ QL KIL D+DL+SI
Sbjct: 899 ELTYIRQELRNPLNGMQFTCNLLKPSELTEEQRQLLSSNVLCQDQLKKILHDTDLESIEQ 958
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
Y+++ VEF L + L + Q + K I I ++ LYGD++RLQQ+LAD
Sbjct: 959 CYMEMNTVEFNLEQALNTVLMQGIPLGKEKQISIERNWPVEVSCMYLYGDNLRLQQILAD 1018
Query: 1015 FLSISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
+L+ ++ F G +++ K+ +G + +A+LE R
Sbjct: 1019 YLACALQFTQTAEGPIVLQVMSKKENIGSGMQIAHLEFR 1057
>gi|77963968|gb|ABB13326.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1139
Score = 1231 bits (3185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1049 (56%), Positives = 780/1049 (74%), Gaps = 13/1049 (1%)
Query: 12 NTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYL 71
++ +SRHS RV+AQT +DA+LHA+FE+S FDYS+SV + +G + +A+L
Sbjct: 16 SSARSRHSERVVAQTPVDAQLHAEFESSHRHFDYSSSVSALNRSGAS----TSSAVSAFL 71
Query: 72 HHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKT 131
++Q+G+ IQPFGCLLA+ ++F ++AYSENA E+L + HAVP++ L +G+D++T
Sbjct: 72 QNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRT 131
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F + SA AL KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID EPV P +VP
Sbjct: 132 LFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVP 191
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMAYKFHED+HGE
Sbjct: 192 VTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGE 251
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
V++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++ D L ++
Sbjct: 252 VIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIHDGNLSQPIS 311
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQKRKRLWGLVVC 367
LCGST+RAPH CH QYM NM SIASLVM+V VN++++E +T P+ RK LWGLVVC
Sbjct: 312 LCGSTMRAPHGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRK-LWGLVVC 370
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLCDML+RDAP+G
Sbjct: 371 HHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVG 430
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
I TQSPN+MDLVKCDGAAL Y+N+I LG P++ ++ I +WL E H STGLS DSL
Sbjct: 431 IFTQSPNVMDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLL 490
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DEKDDGRKMHP 546
+AGY GA ALG+VVCGMAA++IS K IFWFRS TA E++W GAKHEP D D+GR+MHP
Sbjct: 491 EAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHP 550
Query: 547 RSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD--LK 604
RSSF+AFLEVVK RS+PW+D EMDAIHSLQLILR + +D D + +SI D K
Sbjct: 551 RSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRK 610
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTL 664
I+G+ EL VT+EMVRLIETAT PILAVD+ G +NGWN K+AE+TGL +AIG + L
Sbjct: 611 IQGLLELRIVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVDL 670
Query: 665 VEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGV 724
VE S++ +K+ML A+QG EEQN + ++KT + ++ P+ L+VNAC SRDL D VVGV
Sbjct: 671 VEGDSVEVIKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGV 730
Query: 725 CFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGW 784
CFVAQD+T K VMDK+T+I+GDY AIV+NPN LIPPIF ++ G C EWN AM K+TG
Sbjct: 731 CFVAQDLTGHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGI 790
Query: 785 KREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKY 844
KRE+ IDKLL+ EVF + CR+K+Q L I++N +SGQ+PEK+ FGFF+ +GKY
Sbjct: 791 KREDAIDKLLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKY 850
Query: 845 AECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIR 904
E LL NK+ D EG +TG CFL + S ELQ AL VQ++SEQ A + K L Y +++++
Sbjct: 851 MESLLTANKRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELK 910
Query: 905 NPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEF 964
NPL+G+ F+RK++E ++L EQ++L ++ CQ QL KIL D+DL+ I Y+++ VEF
Sbjct: 911 NPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCYMEMNTVEF 970
Query: 965 TLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV- 1023
L E L + Q M S K I + + ++ S LYGD++RLQQVLAD+L+ ++ F
Sbjct: 971 NLEEALNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYLACTLQFTR 1030
Query: 1024 PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
P G +++ K+ +G + +A+LE R
Sbjct: 1031 PAEGPIVLQVIPKKEHIGSGMRIAHLEFR 1059
>gi|326491833|dbj|BAJ98141.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1147
Score = 1230 bits (3182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/1049 (56%), Positives = 780/1049 (74%), Gaps = 13/1049 (1%)
Query: 12 NTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYL 71
++ +SRHS RV+AQT +DA+LHA+FE+S FDYS+SV + +G + +A+L
Sbjct: 16 SSARSRHSERVVAQTPVDAQLHAEFESSHRHFDYSSSVSALNRSGAS----TSSAVSAFL 71
Query: 72 HHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKT 131
++Q+G+ IQPFGCLLA+ ++F ++AYSENA E+L + HAVP++ L +G+D++T
Sbjct: 72 QNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRT 131
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F + SA AL KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID EPV P +VP
Sbjct: 132 LFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVP 191
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMAYKFHED+HGE
Sbjct: 192 VTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGE 251
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
V++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++QD L ++
Sbjct: 252 VIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPIS 311
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQKRKRLWGLVVC 367
LCGST+RAPH CH QYM NM SIASLVM+V VN++++E +T P+ RK LWGLVVC
Sbjct: 312 LCGSTMRAPHGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRK-LWGLVVC 370
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PRFVP PLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLCDML+RDAP+G
Sbjct: 371 HHTSPRFVPSPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVG 430
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
I TQSPN+MDLVKCDGAAL Y+N+I LG P++ ++ I +WL E H STGLS DSL
Sbjct: 431 IFTQSPNVMDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLL 490
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DEKDDGRKMHP 546
+AGY GA ALG+VVCGMAA++IS K IFWFRS TA E++W GAKHEP D D+GR+MHP
Sbjct: 491 EAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHP 550
Query: 547 RSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD--LK 604
RSSF+AFLEVVK RS+PW+D EMDAIHSLQLILR + +D D + +SI D K
Sbjct: 551 RSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRK 610
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTL 664
I+G+ EL VT+EMVRLIETAT PILAVD+ G +NGWN K+AE+TGL +AIG + L
Sbjct: 611 IQGLLELRIVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVDL 670
Query: 665 VEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGV 724
VE S++ +K+ML A+QG EEQN + ++KT + ++ P+ L+VNAC SRDL D VVGV
Sbjct: 671 VEGDSVEVIKQMLNSAMQGTEEQNFEIKLKTFHQQESNGPVVLMVNACCSRDLSDKVVGV 730
Query: 725 CFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGW 784
CFVAQD+T K VMDK+T+I+GDY AIV+NPN LIPPIF ++ G C EWN AM K+TG
Sbjct: 731 CFVAQDLTGHKMVMDKYTQIQGDYVAIVKNPNELIPPIFMINDLGSCLEWNEAMQKITGI 790
Query: 785 KREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKY 844
KRE+ IDKLL+ EVF + CR+K+Q L I++N +SGQ+PEK+ FGFF+ +GKY
Sbjct: 791 KREDAIDKLLIGEVFTLHDYGCRVKDQATITKLSILMNTVISGQEPEKLAFGFFSTDGKY 850
Query: 845 AECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIR 904
E LL NK+ D EG +TG CFL + S ELQ AL VQ++SEQ A + K L Y +++++
Sbjct: 851 MESLLTANKRTDAEGKITGALCFLHVPSPELQHALQVQKMSEQAAARSFKELTYIRQELK 910
Query: 905 NPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEF 964
NPL+G+ F+RK++E ++L EQ++L ++ CQ QL KIL D+DL+ I Y+++ VEF
Sbjct: 911 NPLNGMQFTRKLLEPSDLTEEQRQLFASNVLCQEQLKKILHDNDLEGIEQCYMEMNTVEF 970
Query: 965 TLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV- 1023
L E L + Q M S K I + + ++ S LYGD++RLQQVLAD+L+ ++ F
Sbjct: 971 NLEEALNTVLMQGMSLSKEKQISLDRDWPVEVSSMYLYGDNLRLQQVLADYLACTLQFTR 1030
Query: 1024 PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
P G +++ K+ +G + +A+LE R
Sbjct: 1031 PAEGPIVLQVIPKKEHIGSGMQIAHLEFR 1059
>gi|2499557|sp|Q41046.1|PHY_PINSY RecName: Full=Phytochrome
gi|1237084|emb|CAA65510.1| phytochrome [Pinus sylvestris]
Length = 1131
Score = 1213 bits (3139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/1041 (56%), Positives = 767/1041 (73%), Gaps = 21/1041 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
A +AQ DA+L FE SG SFDY+ S++V + A +QQ TAYL IQ+
Sbjct: 31 ATAMAQYNSDARLLQVFEQSGESGKSFDYTRSIQVHNRAVPEQQ------ITAYLSRIQR 84
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG--DHPVLGIGSDIKTIFT 134
G IQPFGC+LA++E TF++IAYSEN E+L + +VPS+ VL IG+D++T+FT
Sbjct: 85 GGRIQPFGCVLAVEETTFRIIAYSENE-EMLDLGAQSVPSMEKPQQDVLTIGTDVRTLFT 143
Query: 135 APSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTA 194
A SA +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++ID EP++ + M+A
Sbjct: 144 AASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSA 203
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
AGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGYDRVM YKFHED+HGEVV+
Sbjct: 204 AGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVA 263
Query: 255 EITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCG 314
EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+L L L G
Sbjct: 264 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVG 323
Query: 315 STLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRF 374
ST APH CH QYM NM SI SL+MAV++N ++EG + + +LWGLVVCH+T+PR
Sbjct: 324 STPSAPHGCHAQYMANMGSIRSLLMAVIINGNDDEGGGS-GRNSMKLWGLVVCHHTSPRA 382
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPN 434
VPFPLRYACEFL Q + +N EL+L Q+ EK+ILRTQTLLCDML+RDAP+GIVTQSP+
Sbjct: 383 VPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPS 442
Query: 435 IMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGA 494
I DLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DSL DAGY GA
Sbjct: 443 IKDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGA 502
Query: 495 LALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFL 554
+LGD VCGMA+ RI+ KD +FWFRS TA E++WGGAKH PD+KDD R+MHPRSSFKAFL
Sbjct: 503 ASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFL 562
Query: 555 EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEA 613
EVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L L+++G+ EL +
Sbjct: 563 EVVKRRSLPWDNVEIDAIHSLQLILRCSFRDID--DSGTKTMVHSRLNYLRLQGIDELSS 620
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDT 672
V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G + LV + S++
Sbjct: 621 VASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEQSVER 680
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
V++ML+ AL+G+EE+N++ +KT G + + + L+VNAC+SRD DN+VGVCFV QD+T
Sbjct: 681 VEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNIVGVCFVGQDVT 740
Query: 733 PQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDK 792
QK VMDKF RI+GDY++IVQ+PNPLIPPIF SDE+ C EWN AM K+TGW +EVI K
Sbjct: 741 SQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCSEWNAAMEKVTGWTHDEVIGK 800
Query: 793 LLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVN 852
+L+ E+FG CCRLK Q+A IVL++ GQ+ EK PF FF + GKY E LL N
Sbjct: 801 MLVGEIFG---GCCRLKGQDAVTKFTIVLHQCNHGQEIEKFPFAFFDKQGKYVEALLTAN 857
Query: 853 KKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K+ D +G +TG FCF ++AS ELQ AL VQR E+ RLK LAY +++I+NPL G++F
Sbjct: 858 KRTDADGRITGSFCFFRIASSELQHALEVQRQQEKKCFARLKELAYIRQEIKNPLYGMMF 917
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVA 972
+RK++E T+L +QK+ + TSA C+RQ+ K++DD DL+S+ DGY++L+ EF L V+ A
Sbjct: 918 TRKLLEETDLSDDQKQFVETSAVCERQMQKVMDDMDLESLEDGYMELDTAEFILGTVIDA 977
Query: 973 SISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN-GGQLMV 1031
+SQ M+ KG++++ E ++ + LYGD +++QQ+LADFL + F P+ G + +
Sbjct: 978 VVSQGMIVLREKGLQLIREIPGEVKTMRLYGDEVKIQQILADFLLNVLRFTPSPEGWVAI 1037
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
T QLG +H+ +LE R
Sbjct: 1038 KVFPTLKQLGGGLHVVHLEFR 1058
>gi|6226671|sp|P42496.2|PHY_ADICA RecName: Full=Phytochrome 1
gi|3327373|dbj|BAA31710.1| phytochrome [Adiantum capillus-veneris]
gi|3337115|dbj|BAA31856.1| phytochrome 1 [Adiantum capillus-veneris]
Length = 1118
Score = 1207 bits (3124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/1041 (56%), Positives = 767/1041 (73%), Gaps = 24/1041 (2%)
Query: 21 RVIAQTTIDAKLHADFETSGTS--FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGK 78
R IAQT+ DAKL+A +E S S FDYS SV +AG ++ S ++ TAYL +Q+G
Sbjct: 20 RRIAQTSADAKLYAAYEESSESGSFDYSQSV----SAG--KEGISSQLVTAYLQRMQRGG 73
Query: 79 LIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSA 138
L+Q FGCL+A++E+TF+V+AY NAPE+L + AVP++G + L IG+D++T+ + SA
Sbjct: 74 LVQQFGCLIAVEEETFRVLAYGANAPEMLDVATQAVPTMGQYSRLCIGADVRTLLSPASA 133
Query: 139 SALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGAL 198
SAL + +G +VS+ NPI V ++SGKPFYAI+HR L+ID EP++P + +T GAL
Sbjct: 134 SALDRVIGVVDVSMFNPITVQSRSSGKPFYAILHRNDVGLVIDLEPIRPDDASITG-GAL 192
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QS+KLAAKAI RLQSLP G + LCD++++EV ELTG+DRVMAYKFHED+HGEVV+EI +
Sbjct: 193 QSHKLAAKAIARLQSLPGGDIGLLCDSVVEEVHELTGFDRVMAYKFHEDEHGEVVAEIRR 252
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
+ LEPY+GLHYPATDIPQAARFLFMKN+VRMI DCR VK++QD+ L ++L GS LR
Sbjct: 253 TDLEPYIGLHYPATDIPQAARFLFMKNRVRMICDCRLPPVKLIQDKTLSQPMSLTGSKLR 312
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFP 378
APH CH QYM NMNSI+SLVMAV+VND +++ Q K LWGLVVCH+T+PR+VPFP
Sbjct: 313 APHGCHTQYMANMNSISSLVMAVIVNDSDDDSPGHSSQGIK-LWGLVVCHHTSPRYVPFP 371
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
+R ACEFL QVF++ +N E+ + Q+ EK+ILRTQTLLCDML+RDAP+GIV+QSPNIMDL
Sbjct: 372 VRSACEFLMQVFSLQLNMEVGMAAQVREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDL 431
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
V CDGAAL Y K W LG TP + Q+ DI +WL + H DSTGLS DSL GY A LG
Sbjct: 432 VTCDGAALYYGKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLG 491
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVK 558
D VCG+AA +I+ D +FWFRS TA EVRWGGA+H+P+E+DDGR+MHPRSSFKAFLEVVK
Sbjct: 492 DAVCGLAAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVK 551
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEAVTSE 617
+SLPW+D EMDAIHSLQLILR +F+D+ D +TK+ IH++L DLK++G+ EL V SE
Sbjct: 552 QQSLPWEDVEMDAIHSLQLILRGSFQDID--DSNTKTMIHARLNDLKLQGLDELSTVASE 609
Query: 618 MVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRM 676
MVRLIETAT PILAVD GL+NGWN K+AELTGLS + A+GK LV + S V+R+
Sbjct: 610 MVRLIETATAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERV 669
Query: 677 LYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKT 736
L+LAL+G+EEQ+I+ ++T+ + LIVN C SRD+ +NVVGVCFV QD+T QK
Sbjct: 670 LHLALEGEEEQDIEIHLRTYDQHKQKGVVILIVNTCCSRDVSNNVVGVCFVGQDVTGQKL 729
Query: 737 VMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLA 796
V+D+F RI+GDYKAIVQ+ NPLIPPIFG+DE+G+C EWN AM KL+ W+REEV+ K+L+
Sbjct: 730 VLDRFIRIQGDYKAIVQSLNPLIPPIFGADEYGFCSEWNAAMEKLSNWRREEVLGKMLVG 789
Query: 797 EVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLD 856
E+FG M CCRL+ Q+ L IVLN A++GQ+ EK P F+ RNG+ E LL +K+ D
Sbjct: 790 EIFGLQMVCCRLQGQDVVTKLMIVLNDAVNGQESEKFPLVFYDRNGRRVEALLIASKRTD 849
Query: 857 REGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKM 916
+G +TGVFCFL AS EL QAL ++R E+ K L+Y K +++ PL G+ F+R +
Sbjct: 850 ADGRITGVFCFLHTASPELLQALIIKRAKEKVD----KELSYVKEELKKPLEGLAFTRTV 905
Query: 917 MEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQ 976
+EGT L EQ++L+ T+A C+RQL KIL+D DL++I +GY+DLEM EF + V+ A ISQ
Sbjct: 906 LEGTNLTIEQRQLIKTNAWCERQLRKILED-DLNNIEEGYMDLEMSEFFMGSVIDAVISQ 964
Query: 977 VMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQ-----LMV 1031
M S KG++I+ E + L+GD RLQQVLAD L +IN + + +
Sbjct: 965 GMAASRGKGVQILTEIPNDVKLMCLFGDQARLQQVLADLLFCAINHATTTNEDEKDWVTI 1024
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
S TK +L VHL + E R
Sbjct: 1025 KVSRTKTRLDDGVHLMHFEFR 1045
>gi|39980624|gb|AAR33032.1| phytochrome C [Sorghum propinquum]
Length = 1135
Score = 1206 bits (3119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/1038 (57%), Positives = 765/1038 (73%), Gaps = 12/1038 (1%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
V+AQT +DA+LHA+FE+S +FDYS+SV + + S + Y +Q+G IQ
Sbjct: 25 VVAQTPVDAQLHAEFESSQRNFDYSSSV-----SAAIRPSVSTSTVSTYHQTMQRGLYIQ 79
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLA+ TF ++AYSENAPE+L + HAVP++ L +G+D++T+F + S+ AL
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SY
Sbjct: 140 HKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSY 199
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMAYKFHED+HGEV+SE +S L
Sbjct: 200 KLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDL 259
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++QD+ L L+LCGSTLRA H
Sbjct: 260 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASH 319
Query: 322 SCHLQYMENMNSIASLVMAVVV-NDEEEEGDNTLPQ--KRKRLWGLVVCHNTTPRFVPFP 378
CH QYM NM S+ASLVM+V + NDEEE+GD Q K ++LWGLVVCH+T+PRFVPFP
Sbjct: 320 GCHAQYMANMGSVASLVMSVTISNDEEEDGDPGSDQQPKGRKLWGLVVCHHTSPRFVPFP 379
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
LRYACEFL QVF I +NKE+EL Q E++ILRTQTLLCDML+RDAP+GI TQSPN+MDL
Sbjct: 380 LRYACEFLLQVFGIQLNKEVELVAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMDL 439
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
VKCDGAAL Y+N++ LG TP++ ++ I +WL E H STGLS DSL +AGY GA AL
Sbjct: 440 VKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAALR 499
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DEKDDGRKMHPRSSFKAFLEVV 557
+VVCGMAA++IS KD IFWFRS T E++WGGAKHEP D D+GRKMHPRSSFKAFLEVV
Sbjct: 500 EVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEVV 559
Query: 558 KTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD--LKIEGMKELEAVT 615
K RS+PW+D EMDAIHSLQLILR + +D + +SI D KI+G+ EL VT
Sbjct: 560 KWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPLDDTKKIQGLLELRTVT 619
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKR 675
+EMVRLIETAT P+LAVD+ G +NGWN K AELTGL V +AIG+ + LV SI+ VKR
Sbjct: 620 NEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLVDLVVVDSIEVVKR 679
Query: 676 MLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQK 735
+L ALQG EEQN++ ++K + + PI L+VN+C SRDL + V+GVCFV QD+T QK
Sbjct: 680 ILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQK 739
Query: 736 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLL 795
+MDK+TRI+GDY AIV+NP+ LIPPIF + G C EWN AM K+TG +RE+VIDKLL+
Sbjct: 740 MIMDKYTRIQGDYVAIVKNPSELIPPIFMISDLGSCLEWNKAMQKITGIQREDVIDKLLI 799
Query: 796 AEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKL 855
EVF + CR+K+ L I++N +SGQDPEK+ FGFF +GKY E LL VNK++
Sbjct: 800 GEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKRI 859
Query: 856 DREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRK 915
+ EG +TG CFL +AS ELQ AL VQ++SEQ A K L Y +++RNPL+G+ F+
Sbjct: 860 NAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTCN 919
Query: 916 MMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASIS 975
++E +EL EQ++LL ++ CQ QL KIL D+DL+SI Y+++ VEF L E L +
Sbjct: 920 LLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVLM 979
Query: 976 QVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV-PNGGQLMVSSS 1034
Q + K I I + +I LYGD++RLQQVLAD+L+ ++ F P G +++
Sbjct: 980 QGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQVI 1039
Query: 1035 LTKDQLGQSVHLAYLELR 1052
K+ +G + +A+LE R
Sbjct: 1040 PKKENIGSGMQIAHLEFR 1057
>gi|242038093|ref|XP_002466441.1| hypothetical protein SORBIDRAFT_01g007850 [Sorghum bicolor]
gi|39980596|gb|AAR33018.1| phytochrome C [Sorghum bicolor]
gi|39980598|gb|AAR33019.1| phytochrome C [Sorghum bicolor]
gi|39980600|gb|AAR33020.1| phytochrome C [Sorghum bicolor]
gi|39980622|gb|AAR33031.1| phytochrome C [Sorghum bicolor subsp. x drummondii]
gi|241920295|gb|EER93439.1| hypothetical protein SORBIDRAFT_01g007850 [Sorghum bicolor]
Length = 1135
Score = 1202 bits (3111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1039 (57%), Positives = 766/1039 (73%), Gaps = 14/1039 (1%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
V+AQT +DA+LHA+FE+S +FDYS+SV + + S + Y +Q+G IQ
Sbjct: 25 VVAQTPVDAQLHAEFESSQRNFDYSSSV-----SAAIRPSVSTSTVSTYHQTMQRGLYIQ 79
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLA+ TF ++AYSENAPE+L + HAVP++ L +G+D++T+F + S+ AL
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SY
Sbjct: 140 HKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSY 199
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMAYKFHED+HGEV+SE +S L
Sbjct: 200 KLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDL 259
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++QD+ L L+LCGSTLRA H
Sbjct: 260 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASH 319
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEE----GDNTLPQKRKRLWGLVVCHNTTPRFVPF 377
CH QYM NM S+ASLVM+V ++++EEE G + P+ RK LWGLVVCH+T+PRFVPF
Sbjct: 320 GCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRK-LWGLVVCHHTSPRFVPF 378
Query: 378 PLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMD 437
PLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLCDML+RDAP+GI TQSPN+MD
Sbjct: 379 PLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 438
Query: 438 LVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALAL 497
LVKCDGAAL Y+N++ LG TP++ ++ I +WL E H STGLS DSL +AGY GA AL
Sbjct: 439 LVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAAL 498
Query: 498 GDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DEKDDGRKMHPRSSFKAFLEV 556
+VVCGMAA++IS KD IFWFRS T E++WGGAKHEP D D+GRKMHPRSSFKAFLEV
Sbjct: 499 REVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEV 558
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD--LKIEGMKELEAV 614
VK RS+PW+D EMDAIHSLQLILR + +D + +SI D KI+G+ EL V
Sbjct: 559 VKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTV 618
Query: 615 TSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVK 674
T+EMVRLIETAT P+LAVD+ G +NGWN K AELTGL V +AIG+ + LV SI+ VK
Sbjct: 619 TNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVVVDSIEVVK 678
Query: 675 RMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQ 734
R+L ALQG EEQN++ ++K + + PI L+VN+C SRDL + V+GVCFV QD+T Q
Sbjct: 679 RILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQ 738
Query: 735 KTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLL 794
K +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C EWN AM K+TG +RE+VIDKLL
Sbjct: 739 KMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLL 798
Query: 795 LAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKK 854
+ EVF + CR+K+ L I++N +SGQDPEK+ FGFF +GKY E LL VNK+
Sbjct: 799 IGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKR 858
Query: 855 LDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSR 914
++ EG +TG CFL +AS ELQ AL VQ++SEQ A K L Y +++RNPL+G+ F+
Sbjct: 859 INAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTC 918
Query: 915 KMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASI 974
++E +EL EQ++LL ++ CQ QL KIL D+DL+SI Y+++ VEF L E L +
Sbjct: 919 NLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVL 978
Query: 975 SQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV-PNGGQLMVSS 1033
Q + K I I + +I LYGD++RLQQVLAD+L+ ++ F P G +++
Sbjct: 979 MQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQV 1038
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
K+ +G + +A+LE R
Sbjct: 1039 IPKKENIGSGMQIAHLEFR 1057
>gi|39980612|gb|AAR33026.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980614|gb|AAR33027.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980616|gb|AAR33028.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 1202 bits (3111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/1039 (57%), Positives = 766/1039 (73%), Gaps = 14/1039 (1%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
V+AQT +DA+LHA+FE+S +FDYS+SV + + S + Y +Q+G IQ
Sbjct: 25 VVAQTPVDAQLHAEFESSQRNFDYSSSV-----SAAIRPSVSTSTVSTYHQTMQRGLYIQ 79
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLA+ TF ++AYSENAPE+L + HAVP++ L +G+D++T+F + S+ AL
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SY
Sbjct: 140 HKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSY 199
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMAYKFHED+HGEV+SE +S L
Sbjct: 200 KLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDL 259
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++QD+ L L+LCGSTLRA H
Sbjct: 260 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASH 319
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEE----GDNTLPQKRKRLWGLVVCHNTTPRFVPF 377
CH QYM NM S+ASLVM+V ++++EEE G + P+ RK LWGLVVCH+T+PRFVPF
Sbjct: 320 GCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRK-LWGLVVCHHTSPRFVPF 378
Query: 378 PLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMD 437
PLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLCDML+RDAP+GI TQSPN+MD
Sbjct: 379 PLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 438
Query: 438 LVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALAL 497
LVKCDGAAL Y+N++ LG TP++ ++ I +WL E H STGLS DSL +AGY GA AL
Sbjct: 439 LVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAAL 498
Query: 498 GDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DEKDDGRKMHPRSSFKAFLEV 556
+VVCGMAA++IS KD IFWFRS T E++WGGAKHEP D D+GRKMHPRSSFKAFLEV
Sbjct: 499 REVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEV 558
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD--LKIEGMKELEAV 614
VK RS+PW+D EMDAIHSLQLILR + +D + +SI D KI+G+ EL V
Sbjct: 559 VKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTV 618
Query: 615 TSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVK 674
T+EMVRLIETAT P+LAVD+ G +NGWN K AELTGL V +AIG+ + LV SI+ VK
Sbjct: 619 TNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVVVDSIEVVK 678
Query: 675 RMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQ 734
R+L ALQG EEQN++ ++K + + PI L+VN+C SRDL + V+GVCFV QD+T Q
Sbjct: 679 RILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQ 738
Query: 735 KTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLL 794
K +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C EWN AM K+TG +RE+VIDKLL
Sbjct: 739 KMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLL 798
Query: 795 LAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKK 854
+ EVF + CR+K+ L I++N +SGQDPEK+ FGFF +GKY E LL VNK+
Sbjct: 799 IGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKR 858
Query: 855 LDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSR 914
++ EG +TG CFL +AS ELQ AL VQ++SEQ A K L Y +++RNPL+G+ F+
Sbjct: 859 INAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTC 918
Query: 915 KMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASI 974
++E +EL EQ++LL ++ CQ QL KIL D+DL+SI Y+++ VEF L E L +
Sbjct: 919 NLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVL 978
Query: 975 SQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV-PNGGQLMVSS 1033
Q + K I I + +I LYGD++RLQQVLAD+L+ ++ F P G +++
Sbjct: 979 MQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQV 1038
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
K+ +G + +A+LE R
Sbjct: 1039 IPKKENIGSGMQIAHLEFR 1057
>gi|39980618|gb|AAR33029.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 1201 bits (3107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/1039 (57%), Positives = 766/1039 (73%), Gaps = 14/1039 (1%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
V+AQT +DA+LHA+FE+S +FDYS+SV + + S + Y +Q+G IQ
Sbjct: 25 VVAQTPVDAQLHAEFESSQRNFDYSSSV-----SAAIRPSVSTSTVSTYHQTMQRGLYIQ 79
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLA+ TF ++AYSENAPE+L + HAVP++ L +G+D++T+F + S+ AL
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SY
Sbjct: 140 HKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSY 199
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMAYKFHED+HGEV+SE +S L
Sbjct: 200 KLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDL 259
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++QD+ L L+LCGSTLRA H
Sbjct: 260 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASH 319
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEE----GDNTLPQKRKRLWGLVVCHNTTPRFVPF 377
CH QYM NM S+ASLVM+V ++++EEE G + P+ RK LWGLVVCH+T+PRFVPF
Sbjct: 320 GCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRK-LWGLVVCHHTSPRFVPF 378
Query: 378 PLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMD 437
PLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLCDML+RDAP+GI TQSPN+MD
Sbjct: 379 PLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 438
Query: 438 LVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALAL 497
LVKCDGAAL Y+N++ LG TP++ ++ I +WL E H STGLS DSL +AGY GA AL
Sbjct: 439 LVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAAL 498
Query: 498 GDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DEKDDGRKMHPRSSFKAFLEV 556
+VVCGMAA++IS KD IFWFRS T E++WGGAKHEP D D+GRKMHPRSSFKAFLEV
Sbjct: 499 REVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEV 558
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD--LKIEGMKELEAV 614
VK RS+PW+D E+DAIHSLQLILR + +D + +SI D KI+G+ EL V
Sbjct: 559 VKWRSVPWEDVEIDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTV 618
Query: 615 TSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVK 674
T+EMVRLIETAT P+LAVD+ G +NGWN K AELTGL V +AIG+ + LV SI+ VK
Sbjct: 619 TNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVVVDSIEVVK 678
Query: 675 RMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQ 734
R+L ALQG EEQN++ ++K + + PI L+VN+C SRDL + V+GVCFV QD+T Q
Sbjct: 679 RILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQ 738
Query: 735 KTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLL 794
K +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C EWN AM K+TG +RE+VIDKLL
Sbjct: 739 KMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLL 798
Query: 795 LAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKK 854
+ EVF + CR+K+ L I++N +SGQDPEK+ FGFF +GKY E LL VNK+
Sbjct: 799 IGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKR 858
Query: 855 LDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSR 914
++ EG +TG CFL +AS ELQ AL VQ++SEQ A K L Y +++RNPL+G+ F+
Sbjct: 859 INAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTC 918
Query: 915 KMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASI 974
++E +EL EQ++LL ++ CQ QL KIL D+DL+SI Y+++ VEF L E L +
Sbjct: 919 NLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVL 978
Query: 975 SQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV-PNGGQLMVSS 1033
Q + K I I + +I LYGD++RLQQVLAD+L+ ++ F P G +++
Sbjct: 979 MQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQV 1038
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
K+ +G + +A+LE R
Sbjct: 1039 IPKKENIGSGMQIAHLEFR 1057
>gi|39980620|gb|AAR33030.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 1201 bits (3107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/1039 (57%), Positives = 765/1039 (73%), Gaps = 14/1039 (1%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
V+AQT +DA+LHA+FE+S +FDYS+SV + + S + Y +Q+G IQ
Sbjct: 25 VVAQTPVDAQLHAEFESSQRNFDYSSSV-----SAAIRPSVSTSTVSTYHQTMQRGLYIQ 79
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLA+ TF ++AYSENAPE+L + HAVP++ L +G+D++T+F + S+ AL
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SY
Sbjct: 140 HKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSY 199
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMAYKFHED+HGEV+SE +S L
Sbjct: 200 KLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDL 259
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++QD+ L L+LCGSTLRA H
Sbjct: 260 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASH 319
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEE----GDNTLPQKRKRLWGLVVCHNTTPRFVPF 377
CH QYM NM S+ASLVM+V ++++EEE G + P+ RK LWGLVVCH+T+PRFVPF
Sbjct: 320 GCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRK-LWGLVVCHHTSPRFVPF 378
Query: 378 PLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMD 437
PLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLCDML+RDAP+GI TQSPN+ D
Sbjct: 379 PLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVTD 438
Query: 438 LVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALAL 497
LVKCDGAAL Y+N++ LG TP++ ++ I +WL E H STGLS DSL +AGY GA AL
Sbjct: 439 LVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAAL 498
Query: 498 GDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DEKDDGRKMHPRSSFKAFLEV 556
+VVCGMAA++IS KD IFWFRS T E++WGGAKHEP D D+GRKMHPRSSFKAFLEV
Sbjct: 499 REVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEV 558
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD--LKIEGMKELEAV 614
VK RS+PW+D EMDAIHSLQLILR + +D + +SI D KI+G+ EL V
Sbjct: 559 VKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTV 618
Query: 615 TSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVK 674
T+EMVRLIETAT P+LAVD+ G +NGWN K AELTGL V +AIG+ + LV SI+ VK
Sbjct: 619 TNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVVVDSIEVVK 678
Query: 675 RMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQ 734
R+L ALQG EEQN++ ++K + + PI L+VN+C SRDL + V+GVCFV QD+T Q
Sbjct: 679 RILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQ 738
Query: 735 KTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLL 794
K +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C EWN AM K+TG +RE+VIDKLL
Sbjct: 739 KMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLL 798
Query: 795 LAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKK 854
+ EVF + CR+K+ L I++N +SGQDPEK+ FGFF +GKY E LL VNK+
Sbjct: 799 IGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKR 858
Query: 855 LDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSR 914
++ EG +TG CFL +AS ELQ AL VQ++SEQ A K L Y +++RNPL+G+ F+
Sbjct: 859 INAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTC 918
Query: 915 KMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASI 974
++E +EL EQ++LL ++ CQ QL KIL D+DL+SI Y+++ VEF L E L +
Sbjct: 919 NLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVL 978
Query: 975 SQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV-PNGGQLMVSS 1033
Q + K I I + +I LYGD++RLQQVLAD+L+ ++ F P G +++
Sbjct: 979 MQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQV 1038
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
K+ +G + +A+LE R
Sbjct: 1039 IPKKENIGSGMQIAHLEFR 1057
>gi|39980606|gb|AAR33023.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980608|gb|AAR33024.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980610|gb|AAR33025.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 1200 bits (3104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/1039 (57%), Positives = 765/1039 (73%), Gaps = 14/1039 (1%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
V+AQT +DA+LHA+FE+S +FDYS+SV + + S + Y +Q+G IQ
Sbjct: 25 VVAQTPVDAQLHAEFESSQRNFDYSSSV-----SAAIRPSVSTSTVSTYHQTMQRGLYIQ 79
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLA+ TF ++AYSENAPE+L + HAVP++ L +G+D++T+F + S+ AL
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SY
Sbjct: 140 HKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSY 199
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMAYKFHED+HGEV+SE +S L
Sbjct: 200 KLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDL 259
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++QD+ L L+LCGSTLRA H
Sbjct: 260 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASH 319
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEE----GDNTLPQKRKRLWGLVVCHNTTPRFVPF 377
CH QYM NM S+ASLVM+V ++++EEE G + P+ RK LWGLV+CH+T+PRFVPF
Sbjct: 320 GCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRK-LWGLVICHHTSPRFVPF 378
Query: 378 PLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMD 437
PLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLCDML+RDAP+GI TQSPN+ D
Sbjct: 379 PLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVTD 438
Query: 438 LVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALAL 497
LVKCDGAAL Y+N++ LG TP++ ++ I +WL E H STGLS DSL +AGY GA AL
Sbjct: 439 LVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAAL 498
Query: 498 GDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DEKDDGRKMHPRSSFKAFLEV 556
+VVCGMAA++IS KD IFWFRS T E++WGGAKHEP D D+GRKMHPRSSFKAFLEV
Sbjct: 499 REVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEV 558
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD--LKIEGMKELEAV 614
VK RS+PW+D EMDAIHSLQLILR + +D + +SI D KI+G+ EL V
Sbjct: 559 VKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTV 618
Query: 615 TSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVK 674
T+EMVRLIETAT P+LAVD+ G +NGWN K AELTGL V +AIG+ + LV SI+ VK
Sbjct: 619 TNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVVVDSIEVVK 678
Query: 675 RMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQ 734
R+L ALQG EEQN++ ++K + + PI L+VN+C SRDL + V+GVCFV QD+T Q
Sbjct: 679 RILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQ 738
Query: 735 KTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLL 794
K +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C EWN AM K+TG +RE+VIDKLL
Sbjct: 739 KMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLL 798
Query: 795 LAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKK 854
+ EVF + CR+K+ L I++N +SGQDPEK+ FGFF +GKY E LL VNK+
Sbjct: 799 IGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKR 858
Query: 855 LDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSR 914
++ EG +TG CFL +AS ELQ AL VQ++SEQ A K L Y +++RNPL+G+ F+
Sbjct: 859 INAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTC 918
Query: 915 KMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASI 974
++E +EL EQ++LL ++ CQ QL KIL D+DL+SI Y+++ VEF L E L +
Sbjct: 919 NLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVL 978
Query: 975 SQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV-PNGGQLMVSS 1033
Q + K I I + +I LYGD++RLQQVLAD+L+ ++ F P G +++
Sbjct: 979 MQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQV 1038
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
K+ +G + +A+LE R
Sbjct: 1039 IPKKENIGSGMQIAHLEFR 1057
>gi|39980602|gb|AAR33021.1| phytochrome C [Sorghum bicolor]
gi|39980604|gb|AAR33022.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 1200 bits (3104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/1039 (57%), Positives = 764/1039 (73%), Gaps = 14/1039 (1%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
V+AQT +DA+LHA+FE+S +FDYS+SV + + S + Y +Q+G IQ
Sbjct: 25 VVAQTPVDAQLHAEFESSQRNFDYSSSV-----SAAIRPSVSTSTVSTYHQTMQRGLYIQ 79
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLA+ TF ++AYSENAPE+L + HAVP++ L +G+D++T+F + S+ AL
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
KA FGEV+LLNPILVH +TS KPFYAI+HR+ L+ID EPV P +VP TAAGAL+SY
Sbjct: 140 HKAATFGEVNLLNPILVHARTSRKPFYAILHRIDVGLVIDLEPVNPVDVPATAAGALKSY 199
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMAYKFHED+HGEV+SE +S L
Sbjct: 200 KLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDL 259
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++QD+ L L+LCGSTLRA H
Sbjct: 260 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASH 319
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEE----GDNTLPQKRKRLWGLVVCHNTTPRFVPF 377
CH QYM NM S+ASLVM+V ++++EEE G + P+ RK LWGLVVCH+T+PRFVPF
Sbjct: 320 GCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRK-LWGLVVCHHTSPRFVPF 378
Query: 378 PLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMD 437
PLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLCDML+RDAP+GI TQSPN+MD
Sbjct: 379 PLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCDMLLRDAPVGIFTQSPNVMD 438
Query: 438 LVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALAL 497
LVKCDGAAL Y+N++ LG TP++ ++ I +WL E H STGLS DSL +AGY GA AL
Sbjct: 439 LVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAAL 498
Query: 498 GDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DEKDDGRKMHPRSSFKAFLEV 556
+VVCGMAA++IS KD IFWFRS T E++WGGAKHEP D D+GRKMHPRSSFKAFLEV
Sbjct: 499 REVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEV 558
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD--LKIEGMKELEAV 614
VK RS+PW+D EMDAIHSLQLILR + +D + +SI D KI+G+ EL V
Sbjct: 559 VKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTV 618
Query: 615 TSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVK 674
T+EMVRLIETAT P+LAVD+ G +NGWN K AELTGL V +AIG+ + LV SI+ VK
Sbjct: 619 TNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVVVDSIEVVK 678
Query: 675 RMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQ 734
R+L ALQG EEQN++ ++K + + PI L+VN+C SRDL + V+GVCFV QD+T Q
Sbjct: 679 RILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQ 738
Query: 735 KTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLL 794
K +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C EWN AM K+TG +RE+VIDKLL
Sbjct: 739 KMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLL 798
Query: 795 LAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKK 854
+ EVF + CR+K+ L I++N +SGQDPEK+ FGFF +GKY E LL VNK+
Sbjct: 799 IGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKR 858
Query: 855 LDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSR 914
++ EG +TG CFL +AS ELQ AL VQ++SEQ A K L Y +++RNPL+G+ F+
Sbjct: 859 INAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTC 918
Query: 915 KMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASI 974
++E +EL EQ++LL ++ CQ QL KIL D+DL+SI Y+++ VEF L E L +
Sbjct: 919 NLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVL 978
Query: 975 SQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV-PNGGQLMVSS 1033
Q + K I I + +I LYGD++RLQQVLAD+L+ ++ F P G +++
Sbjct: 979 MQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQV 1038
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
K+ +G + +A+LE R
Sbjct: 1039 IPKKENIGSGMQIAHLEFR 1057
>gi|449453752|ref|XP_004144620.1| PREDICTED: phytochrome C-like [Cucumis sativus]
Length = 1119
Score = 1199 bits (3103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/1052 (54%), Positives = 771/1052 (73%), Gaps = 7/1052 (0%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S+++ S ++ +S+H A V+AQT IDAKLH DFE S FDYS SV ++
Sbjct: 5 STNKTVCSKTSFDRSKHGAHVVAQTPIDAKLHVDFEGSERLFDYSASVDFNAACSTSNVH 64
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
S +YL +IQ+G L+QPFGC++A+D + V+AYSENAPE+L + HAVP++
Sbjct: 65 AS--TVQSYLLNIQRGSLVQPFGCMIAVDGENLSVLAYSENAPEMLDLAPHAVPNIEQQE 122
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L G+D++T+F +P A+ALQKA F EV+LLNPILVHC+TSGKPFYAI+HRV LIID
Sbjct: 123 ALTFGTDVRTLFRSPGAAALQKAADFKEVNLLNPILVHCRTSGKPFYAILHRVDVGLIID 182
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P +VP+TAAGAL+SYKLAAKAI++LQ+L SG++ LC+ +++EV +LTGYDRVM
Sbjct: 183 LEPVNPADVPVTAAGALKSYKLAAKAISKLQNLQSGNISLLCEVLVKEVSDLTGYDRVMV 242
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+D+HGEVV+E +S LEPY GLHYPATDIPQA+RFLF+KNKVRMI DC A VKVL
Sbjct: 243 YKFHDDEHGEVVAECCRSDLEPYFGLHYPATDIPQASRFLFLKNKVRMICDCLAPPVKVL 302
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRL 361
QD +L L+LCGS LRAPH CH +YM NM SIASLVM++ +N+ + E +N +K ++L
Sbjct: 303 QDRRLAQPLSLCGSALRAPHGCHARYMMNMGSIASLVMSITINENDSESEND-QEKDRKL 361
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGLVVCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL+ Q+ EK+ILR QT+LCDML+
Sbjct: 362 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGIQINKEVELQAQLKEKHILRIQTVLCDMLL 421
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RDAP+GIVTQSPNIMDLVKCDGAAL ++ K W LGVTP + Q+ +I WL + H STGL
Sbjct: 422 RDAPVGIVTQSPNIMDLVKCDGAALYFRKKFWSLGVTPTEAQIRNIADWLLKDHSGSTGL 481
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
S DSL +AG+ GA ALGD +CGMAAVRI+ KD +FWFRS A E+RWGGAKH+P ++DDG
Sbjct: 482 STDSLTEAGFYGASALGDEICGMAAVRITSKDFLFWFRSHMAKEIRWGGAKHDPSDEDDG 541
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS-KL 600
RKMHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D ++ + K I +
Sbjct: 542 RKMHPRSSFKAFLEVVKRRSQPWEDVEMDAIHSLQLILRGSLQD--EIEEECKVITTVPP 599
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
D K + + EL +T+EMVRLIETA VPILAVDV G +NGWN+K ELTGL++ +AIG
Sbjct: 600 VDEKTQQLDELRVITNEMVRLIETAAVPILAVDVFGKINGWNSKATELTGLAIQEAIGMP 659
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ V + S+ VK+ML LA+QG EE+N++ ++KT G+ + + P+ L VN+C SRDL++N
Sbjct: 660 LVDCVVNDSVKVVKKMLSLAIQGIEEKNVEIKLKTFGTAVQNGPVILEVNSCCSRDLNNN 719
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVK 780
VVG+ F+ QD+T QK VM+++T+I+GDY I++NP+ LIPPIF +D G C EWN AM K
Sbjct: 720 VVGISFIGQDVTKQKLVMNQYTQIQGDYTGIMRNPSALIPPIFMADGEGRCLEWNDAMEK 779
Query: 781 LTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFAR 840
L+G++R E+ +++LL EVF CR+K+ L I+L++ +SGQD EK F F R
Sbjct: 780 LSGFRRVEMTNRMLLGEVFTLENFGCRVKDH-TLTKLRIILHRVISGQDTEKFLFRFCDR 838
Query: 841 NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK 900
G Y E LL +K+ D EG VTGVF FL +AS ELQ AL +QR+SEQ + L LAY +
Sbjct: 839 EGNYVESLLTASKRTDTEGTVTGVFFFLHVASPELQYALEMQRISEQATAENLHKLAYLR 898
Query: 901 RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLE 960
++IR PL GI + ++ ++L EQK+L+ + + QLHKI+ D+D+ SI + Y++
Sbjct: 899 QEIRKPLDGIALMQNLISSSDLSIEQKQLIKLNTLSREQLHKIVHDTDIQSIEECYMETN 958
Query: 961 MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI 1020
EF L +VL +Q M S + ++I+ E+ + S LYGD++RLQQVL++FL+ ++
Sbjct: 959 CSEFNLGDVLDVVTNQTMTLSQEREVKIICESLADVSSLHLYGDNLRLQQVLSEFLTNTL 1018
Query: 1021 NFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
F ++ ++ K+++G+ +H+ +LELR
Sbjct: 1019 LFTCKESSVIFKATPRKERIGKGIHIVHLELR 1050
>gi|39980592|gb|AAR33016.1| phytochrome C [Sorghum bicolor]
gi|39980594|gb|AAR33017.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 1198 bits (3099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/1039 (57%), Positives = 765/1039 (73%), Gaps = 14/1039 (1%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
V+AQT +DA+LHA+FE+S +FDYS+SV + + S + Y +Q+G IQ
Sbjct: 25 VVAQTPVDAQLHAEFESSQRNFDYSSSV-----SAAIRPSVSTSTVSTYHQTMQRGLYIQ 79
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLA+ TF ++AYSENAPE+L + HAVP++ L +G+D++T+F + S+ AL
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SY
Sbjct: 140 HKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSY 199
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMAYKFHED+HGEV+SE +S L
Sbjct: 200 KLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDL 259
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++QD+ L L+LCGSTLRA H
Sbjct: 260 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASH 319
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEE----GDNTLPQKRKRLWGLVVCHNTTPRFVPF 377
CH QYM NM S+ASLVM+V ++++EEE G + P+ RK LWGLVVCH+T+PRFVPF
Sbjct: 320 GCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRK-LWGLVVCHHTSPRFVPF 378
Query: 378 PLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMD 437
PLRYACEFL QVF I +NKE+EL Q E++ILRTQTLL DML+RDAP+GI TQSPN+MD
Sbjct: 379 PLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLWDMLLRDAPVGIFTQSPNVMD 438
Query: 438 LVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALAL 497
LVKCDGAAL Y+N++ LG TP++ ++ I +WL E H STGLS DSL +AGY GA AL
Sbjct: 439 LVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAAL 498
Query: 498 GDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DEKDDGRKMHPRSSFKAFLEV 556
+VVCGMAA++IS KD IFWFRS T E++WGGAKHEP D D+GRKMHPRSSFKAFLEV
Sbjct: 499 REVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEV 558
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD--LKIEGMKELEAV 614
VK RS+PW+D EMDAIHSLQLILR + +D + +SI D KI+G+ EL V
Sbjct: 559 VKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTV 618
Query: 615 TSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVK 674
T+EMVRLIETAT P+LAVD+ G +NGWN K AELTGL V +AIG+ + LV SI+ VK
Sbjct: 619 TNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVVVDSIEVVK 678
Query: 675 RMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQ 734
R+L ALQG EEQN++ ++K + + PI L+VN+C SRDL + V+GVCFV QD+T Q
Sbjct: 679 RILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQ 738
Query: 735 KTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLL 794
K +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C EWN AM K+TG +RE+VIDKLL
Sbjct: 739 KMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLL 798
Query: 795 LAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKK 854
+ EVF + CR+K+ L I++N +SGQDPEK+ FGFF +GKY E LL VNK+
Sbjct: 799 IGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKR 858
Query: 855 LDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSR 914
++ EG +TG CFL +AS ELQ AL VQ++SEQ A K L Y +++RNPL+G+ F+
Sbjct: 859 INAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTC 918
Query: 915 KMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASI 974
++E +EL EQ++LL ++ CQ QL KIL D+DL+SI Y+++ VEF L E L +
Sbjct: 919 NLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVL 978
Query: 975 SQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV-PNGGQLMVSS 1033
Q + K I I + +I LYGD++RLQQVLAD+L+ ++ F P G +++
Sbjct: 979 MQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQV 1038
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
K+ +G + +A+LE R
Sbjct: 1039 IPKKENIGSGMQIAHLEFR 1057
>gi|189409278|gb|ACC60970.1| phytochrome B [Vitis riparia]
Length = 1129
Score = 1197 bits (3098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/1062 (54%), Positives = 769/1062 (72%), Gaps = 26/1062 (2%)
Query: 3 SSRPAQSSSNTG-KSRHS---ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTA 55
S AQSS + + H+ ++ IAQ T+DA+LHA +E SG SFDYS SVR ++ +
Sbjct: 10 SHHQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGESGKSFDYSQSVRTTTQS 69
Query: 56 GGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVP 115
+QQ TAYL IQ+G IQPFGC+LA+DE TF+VIA+SENA E+L + +VP
Sbjct: 70 VPEQQ------ITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTPQSVP 123
Query: 116 SVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
S+ +L +G+D++T+FT SA L+KA G E++LLNP+ +H K SGKPFYAI+HR+
Sbjct: 124 SLEKPEILLVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRID 183
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID EP + + ++ AGA+QS KLA +AI+ LQSLP G + LC+T+++ V ELTG
Sbjct: 184 VGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCETVVENVRELTG 243
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM YKFHED+HGEVV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A
Sbjct: 244 YDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHA 303
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE---GDN 352
V V+QDE L L L GSTLRAPH CH QYM NM SIASL MAV++N +EE G N
Sbjct: 304 TPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGSDEEAIGGRN 363
Query: 353 TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRT 412
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++LRT
Sbjct: 364 LM-----RLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRT 418
Query: 413 QTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLS 472
QTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y K + GVTP + Q+ DI WL
Sbjct: 419 QTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYLGKYYPTGVTPTEAQIKDIAEWLL 478
Query: 473 EYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
H DSTGLS DSL DAGY GA +LGD VCGMA I+ +D +FWFRS TA E++WGGAK
Sbjct: 479 ANHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGGAK 538
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD 592
H P++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++FKD
Sbjct: 539 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGSNS 598
Query: 593 TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLS 652
+H++L +L+++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLS
Sbjct: 599 KAVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLS 658
Query: 653 VDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNA 711
V++A+GK + LV S +TV ++L+ AL+G+E++N++ +++T S+ + + ++VNA
Sbjct: 659 VEEAMGKSLVHDLVYKESEETVDKLLHHALRGEEDKNVEIKLRTFDSQQHKKAVFVVVNA 718
Query: 712 CASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWC 771
C+SRD +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF SDE C
Sbjct: 719 CSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVC 778
Query: 772 CEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPE 831
EWN AM KLTGW R ++I K+L+ E+FG++ CRLK +A IVL+ A+ GQD +
Sbjct: 779 SEWNTAMEKLTGWSRGDIIGKMLVGEIFGSS---CRLKGPDALTKFMIVLHNAIGGQDTD 835
Query: 832 KVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALK 891
K PF FF +NGKY + LL NK+++ EG + G FCFLQ+AS ELQQAL VQR E+
Sbjct: 836 KFPFSFFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFA 895
Query: 892 RLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDS 951
R+K LAY ++I+NPLSGI F+ ++E T+L +QK+ L TSA C++Q+ KI+ D DLDS
Sbjct: 896 RMKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVDLDS 955
Query: 952 IIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQV 1011
I DG L+LE EF L V+ A +SQVM+ + ++++ + E++ + +YGD +R+QQV
Sbjct: 956 IEDGSLELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVRIQQV 1015
Query: 1012 LADFLSISINFVPN-GGQLMVSSSLTKDQLGQSVHLAYLELR 1052
LADFL + + P+ G + + Q+ + V L ++E R
Sbjct: 1016 LADFLLNMVRYAPSPDGWIEIQVRPRLKQISEEVKLMHIEFR 1057
>gi|449506938|ref|XP_004162889.1| PREDICTED: LOW QUALITY PROTEIN: phytochrome C-like [Cucumis sativus]
Length = 1119
Score = 1196 bits (3095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/1052 (54%), Positives = 770/1052 (73%), Gaps = 7/1052 (0%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S+++ S ++ +S+H A V+AQT IDAKLH DFE S FDYS SV ++
Sbjct: 5 STNKTVCSKTSFDRSKHGAHVVAQTPIDAKLHVDFEGSERLFDYSASVDFNAACSTSNVH 64
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
S +YL +IQ+G L+QPFGC++A+D + V+AYSENAPE+L + HAVP++
Sbjct: 65 AS--TVQSYLLNIQRGSLVQPFGCMIAVDGENLSVLAYSENAPEMLDLAPHAVPNIEQQE 122
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L G+D++T+F +P A+ALQKA F EV+LLNPILVHC+TSGKPFYAI+HRV LIID
Sbjct: 123 ALTFGTDVRTLFRSPGAAALQKAADFKEVNLLNPILVHCRTSGKPFYAILHRVDVGLIID 182
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P +VP+TAAGAL+SYKLAAKAI++LQ+L SG++ LC+ +++EV +LTGYDRVM
Sbjct: 183 LEPVNPADVPVTAAGALKSYKLAAKAISKLQNLQSGNISLLCEVLVKEVSDLTGYDRVMV 242
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+D+HGEVV+E +S LEPY GLHYPATDIPQA+RFLF+KNKVRMI DC A VKVL
Sbjct: 243 YKFHDDEHGEVVAECCRSDLEPYFGLHYPATDIPQASRFLFLKNKVRMICDCLAPPVKVL 302
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRL 361
QD +L L+LCGS LRAPH CH +YM NM SIASLVM++ +N+ + E +N +K ++L
Sbjct: 303 QDRRLAQPLSLCGSALRAPHGCHARYMMNMGSIASLVMSITINENDSESEND-QEKDRKL 361
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGLVVCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL+ Q+ EK+ILR QT+LCDML+
Sbjct: 362 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGIQINKEVELQAQLKEKHILRIQTVLCDMLL 421
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RDAP+GIVTQSPNIMDLVKCDGAAL ++ K W LGVTP + Q+ +I WL + H STGL
Sbjct: 422 RDAPVGIVTQSPNIMDLVKCDGAALYFRKKFWSLGVTPTEAQIRNIADWLLKDHSGSTGL 481
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
S DSL +AG+ GA ALGD +CGMAAVRI+ KD +FWFRS A E+RWGGAKH+P ++DDG
Sbjct: 482 STDSLTEAGFYGASALGDEICGMAAVRITSKDFLFWFRSHMAKEIRWGGAKHDPSDEDDG 541
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS-KL 600
RKMHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D ++ + K I +
Sbjct: 542 RKMHPRSSFKAFLEVVKRRSQPWEDVEMDAIHSLQLILRGSLQD--EIEEECKVITTVPP 599
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
D K + + EL +T+EMVRLIETA VPILAVDV G +NGWN+K ELTGL++ +AIG
Sbjct: 600 VDEKTQQLDELRVITNEMVRLIETAAVPILAVDVFGKINGWNSKATELTGLAIQEAIGMP 659
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ V + S+ VK+ML LA+QG EE+N++ ++KT G+ + + P+ L VN+C SRDL++N
Sbjct: 660 LVDCVVNDSVKVVKKMLSLAIQGIEEKNVEIKLKTFGTAVQNGPVILEVNSCCSRDLNNN 719
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVK 780
VVG+ F+ QD+T QK VM+++T+I+GDY I++NP+ LIPP F +D G C EWN AM K
Sbjct: 720 VVGIXFIGQDVTKQKLVMNQYTQIQGDYTGIMRNPSALIPPXFMADGEGRCLEWNDAMEK 779
Query: 781 LTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFAR 840
L+G++R E+ +++LL EVF CR+K+ L I+L++ +SGQD EK F F R
Sbjct: 780 LSGFRRVEMTNRMLLGEVFTLENFGCRVKDH-TLTKLRIILHRVISGQDTEKFLFRFCDR 838
Query: 841 NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK 900
G Y E LL +K+ D EG VTGVF FL +AS ELQ AL +QR+SEQ + L LAY +
Sbjct: 839 EGNYVESLLTASKRTDTEGTVTGVFFFLHVASPELQYALEMQRISEQATAENLHKLAYLR 898
Query: 901 RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLE 960
++IR PL GI + ++ ++L EQK+L+ + + QLHKI+ D+D+ SI + Y++
Sbjct: 899 QEIRKPLDGIALMQNLISSSDLSIEQKQLIKLNTLSREQLHKIVHDTDIQSIEECYMETN 958
Query: 961 MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI 1020
EF L +VL +Q M S + ++I+ E+ + S LYGD++RLQQVL++FL+ ++
Sbjct: 959 CSEFNLGDVLDVVTNQTMTLSQEREVKIICESLADVSSLHLYGDNLRLQQVLSEFLTNTL 1018
Query: 1021 NFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
F ++ ++ K+++G+ +H+ +LELR
Sbjct: 1019 LFTCKESSVIFKATPRKERIGKGIHIVHLELR 1050
>gi|11134032|sp|P93528.1|PHYC_SORBI RecName: Full=Phytochrome C
gi|1800219|gb|AAB41399.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 1196 bits (3095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/1039 (57%), Positives = 764/1039 (73%), Gaps = 14/1039 (1%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
V+AQT +DA+LHA+FE+S +FDYS+SV + + S + Y +Q+G IQ
Sbjct: 25 VVAQTPVDAQLHAEFESSQRNFDYSSSV-----SAAIRPSVSTSTVSTYHQTMQRGLYIQ 79
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLA+ TF ++AYSENAPE+L + HAVP++ L +G+D++T+F + S+ AL
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SY
Sbjct: 140 HKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSY 199
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMAYKFHED+HGEV+SE +S L
Sbjct: 200 KLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDL 259
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++QD+ L L+LCGSTLRA H
Sbjct: 260 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASH 319
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEE----GDNTLPQKRKRLWGLVVCHNTTPRFVPF 377
CH QYM NM S+ASLVM+V ++++EEE G + P+ RK LWGLVVCH+T+PRFVPF
Sbjct: 320 GCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRK-LWGLVVCHHTSPRFVPF 378
Query: 378 PLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMD 437
PLRYACEFL QVF I +NKE+EL Q E++ILRTQTLL DML+RDAP+GI TQSPN+MD
Sbjct: 379 PLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLWDMLLRDAPVGIFTQSPNVMD 438
Query: 438 LVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALAL 497
LVKCDG AL Y+N++ LG TP++ ++ I +WL E H STGLS DSL +AGY GA AL
Sbjct: 439 LVKCDGVALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAAL 498
Query: 498 GDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DEKDDGRKMHPRSSFKAFLEV 556
+VVCGMAA++IS KD IFWFRS T E++WGGAKHEP D D+GRKMHPRSSFKAFLEV
Sbjct: 499 REVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEV 558
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD--LKIEGMKELEAV 614
VK RS+PW+D EMDAIHSLQLILR + +D + +SI D KI+G+ EL V
Sbjct: 559 VKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTV 618
Query: 615 TSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVK 674
T+EMVRLIETAT P+LAVD+ G +NGWN K AELTGL V +AIG+ + LV SI+ VK
Sbjct: 619 TNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVVVDSIEVVK 678
Query: 675 RMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQ 734
R+L ALQG EEQN++ ++K + + PI L+VN+C SRDL + V+GVCFV QD+T Q
Sbjct: 679 RILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQ 738
Query: 735 KTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLL 794
K +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C EWN AM K+TG +RE+VIDKLL
Sbjct: 739 KMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLL 798
Query: 795 LAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKK 854
+ EVF + CR+K+ L I++N +SGQDPEK+ FGFF +GKY E LL VNK+
Sbjct: 799 IGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKR 858
Query: 855 LDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSR 914
++ EG +TG CFL +AS ELQ AL VQ++SEQ A K L Y +++RNPL+G+ F+
Sbjct: 859 INAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTC 918
Query: 915 KMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASI 974
++E +EL EQ++LL ++ CQ QL KIL D+DL+SI Y+++ VEF L E L +
Sbjct: 919 NLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVL 978
Query: 975 SQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV-PNGGQLMVSS 1033
Q + K I I + +I LYGD++RLQQVLAD+L+ ++ F P G +++
Sbjct: 979 MQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQV 1038
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
K+ +G + +A+LE R
Sbjct: 1039 IPKKENIGSGMQIAHLEFR 1057
>gi|740579|prf||2005378A phytochrome
Length = 1117
Score = 1196 bits (3095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/1041 (56%), Positives = 766/1041 (73%), Gaps = 25/1041 (2%)
Query: 21 RVIAQTTIDAKLHADFETSGTS--FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGK 78
R IAQT+ +AKL+A +E S S FDYS SV +AG ++ S ++ TAYL +Q+G
Sbjct: 20 RRIAQTSANAKLYAAYEESSESGSFDYSQSV----SAG--KEGISSQLVTAYLQRMQRGG 73
Query: 79 LIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSA 138
L+Q FGCL+A++E+TF+V+ E APE+L + AVP++G + L IG+D++T+ + SA
Sbjct: 74 LVQQFGCLIAVEEETFRVLHMCE-APEMLDVATQAVPTMGQYSRLCIGADVRTLLSPASA 132
Query: 139 SALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGAL 198
SAL + +G +VS+ NPI V ++SGKPFYAI+HR L+ID EP++P + +T GAL
Sbjct: 133 SALDRVIGVVDVSMFNPITVQSRSSGKPFYAILHRNDVGLVIDLEPIRPDDASITG-GAL 191
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QS+KLAAKAI RLQSLP G + LCD++++EV ELTG+DRVMAYKFHED+HGEVV+EI +
Sbjct: 192 QSHKLAAKAIARLQSLPGGDIGLLCDSVVEEVHELTGFDRVMAYKFHEDEHGEVVAEIRR 251
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
+ LEPY+GLHYPATDIPQAARFLFMKN+VRMI DCR VK++QD+ L ++L GSTLR
Sbjct: 252 TDLEPYIGLHYPATDIPQAARFLFMKNRVRMICDCRLPPVKLIQDKTLSQPMSLTGSTLR 311
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFP 378
APH CH QYM NMNSI+SLVMAV+VND +++ Q K LWGLVVCH+T+PR+VPFP
Sbjct: 312 APHGCHTQYMANMNSISSLVMAVIVNDSDDDSAGHSSQGIK-LWGLVVCHHTSPRYVPFP 370
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
+R ACEFL QVF++ +N E+ + Q+ EK+ILRTQTLLCDML+RDAP+GIV+QSPNIMDL
Sbjct: 371 VRSACEFLMQVFSLQLNMEVGMAAQVREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDL 430
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
V CDGAAL Y K W LG TP + Q+ DI +WL + H DSTGLS DSL GY A LG
Sbjct: 431 VTCDGAALYYGKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLG 490
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVK 558
D VCG+AA +I+ D +FWFRS TA EVRWGGA+H+P+E+DDGR+MHPRSSFKAFLEVVK
Sbjct: 491 DAVCGLAAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVK 550
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEAVTSE 617
+SLPW+D EMDAIHSLQLILR +F+D+ D +TK+ IH++L DLK++G+ EL V SE
Sbjct: 551 QQSLPWEDVEMDAIHSLQLILRGSFQDID--DSNTKTMIHARLNDLKLQGLDELSTVASE 608
Query: 618 MVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRM 676
MVRLIETAT PILAVD GL+NGWN K+AELTGLS + A+GK LV + S V+R+
Sbjct: 609 MVRLIETATAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERV 668
Query: 677 LYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKT 736
L+LAL+G+EEQ+I+ ++T+ + LIVN C SRD+ +NVVGVCFV QD+T QK
Sbjct: 669 LHLALEGEEEQDIEIHLRTYDQHKQKGVVILIVNTCCSRDVSNNVVGVCFVGQDVTGQKL 728
Query: 737 VMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLA 796
V+D+F RI+GDYKAIVQ+ NPLIPPIFG+DE+G+C EWN AM KL+ W+REEV+ K+L+
Sbjct: 729 VLDRFIRIQGDYKAIVQSLNPLIPPIFGADEYGFCSEWNAAMEKLSNWRREEVLGKMLVG 788
Query: 797 EVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLD 856
E+FG M CCRL+ Q+ L IVLN A++GQ+ EK P F+ RNG+ E LL +K+ D
Sbjct: 789 EIFGLQMVCCRLQGQDVVTKLMIVLNDAVNGQESEKFPLVFYDRNGRRVEALLIASKRTD 848
Query: 857 REGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKM 916
+G +TGVFCFL AS EL QAL ++R E+ K L+Y K +++ PL G+ F+R +
Sbjct: 849 ADGRITGVFCFLHTASPELLQALIIKRAKEKVD----KELSYVKEELKKPLEGLAFTRTV 904
Query: 917 MEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQ 976
+EGT L EQ++L+ T+A C+RQL KIL+D DL++I +GY+DLEM EF + V+ A ISQ
Sbjct: 905 LEGTNLTIEQRQLIKTNAWCERQLRKILED-DLNNIEEGYMDLEMSEFFMGSVIDAVISQ 963
Query: 977 VMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQ-----LMV 1031
M S KG++I+ E + L+GD RLQQVLAD L +IN + + +
Sbjct: 964 GMAASRGKGVQILTEIPNDVKLMCLFGDQARLQQVLADLLFCAINHATTTNEDEKDWVTI 1023
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
S TK +L VHL + E R
Sbjct: 1024 KVSRTKTRLDDGVHLMHFESR 1044
>gi|1125699|gb|AAC49128.1| phytochrome [Mesotaenium caldariorum]
gi|1587953|prf||2207374B phytochrome photoreceptor
Length = 1142
Score = 1196 bits (3094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/1073 (54%), Positives = 781/1073 (72%), Gaps = 27/1073 (2%)
Query: 1 MSSSRPAQSSS-NTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAG 56
MS+SR +QSS +T K++ RV AQ T DAKL+ FE S G SFDY+ SV S AG
Sbjct: 1 MSTSRMSQSSGESTAKTKREVRV-AQATADAKLNTAFEASAAVGGSFDYTKSVGASLNAG 59
Query: 57 GDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS 116
+ P S TAYL +Q+G + Q FGC+L ++E +F+V A+SENA E+L +V AVPS
Sbjct: 60 SEAIPSS--AVTAYLQRMQRGGITQTFGCMLMVEEGSFRVRAFSENAGEMLDLVPQAVPS 117
Query: 117 VGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTG 176
+G ++ +G+DI+T+FT+ S S L+KA +VS++NP+ + + + KPF+A++HR+
Sbjct: 118 MGQQSLIAVGTDIRTLFTSASVSLLEKAAMATDVSVMNPVSLQSRAAKKPFFAVLHRIDV 177
Query: 177 SLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGY 236
L++D EPV+P + ++AAGA+QS+KLAAKAI+RLQSLP G + LCD +++EV ELTGY
Sbjct: 178 GLVVDLEPVRPSDPNVSAAGAMQSHKLAAKAISRLQSLPGGDIGLLCDAVVEEVRELTGY 237
Query: 237 DRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAR 296
DRVMAYKFHED+HGEV++EI +S LEPYLGLHYPATDIPQAARFLFMKN+VR+I DC A
Sbjct: 238 DRVMAYKFHEDEHGEVIAEIRRSDLEPYLGLHYPATDIPQAARFLFMKNRVRIICDCSAP 297
Query: 297 HVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT--- 353
VKV+QD + ++L GSTLR H CH QYM NM S+ASLVMAV++ND E T
Sbjct: 298 PVKVIQDPTMKHPISLAGSTLRGVHGCHAQYMANMGSVASLVMAVIINDNSSEEGATAAG 357
Query: 354 -LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRT 412
+ K ++LWGLVVCH+++PR+VPFPLR ACEFL QVF + +N E+EL Q+ EK+ILRT
Sbjct: 358 GILHKGRKLWGLVVCHHSSPRYVPFPLRSACEFLMQVFGLQLNMEVELSSQLREKHILRT 417
Query: 413 QTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLS 472
QTLLCDML+RDAP+GIV+QSPNI DLVKCDGAAL Y + W LGVTP++ Q+ DI +WL
Sbjct: 418 QTLLCDMLLRDAPMGIVSQSPNITDLVKCDGAALFYHGRAWLLGVTPSEAQVRDIAAWLL 477
Query: 473 EYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
+ H DSTGLS DSL DAGY A +LG VCGMAA RI+ KD +FWFRS EV+W GAK
Sbjct: 478 DSHKDSTGLSTDSLADAGYPNADSLGVSVCGMAAARITSKDFLFWFRSHAQKEVKWAGAK 537
Query: 533 HEPDEKD-----DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDV- 586
EP ++D +G +MHPRSSF+AFLEVVK RSLPW+D EMDAIHSLQLILR +F+D+
Sbjct: 538 QEPGDRDREEGEEGGRMHPRSSFQAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSFQDME 597
Query: 587 ----GTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWN 642
G+ + + I+++L DLK++GM EL V +EMVRLIETAT PILAVD G VNGWN
Sbjct: 598 GEGGGSQQGNKRMINARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSLGCVNGWN 657
Query: 643 TKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKIN 701
K++ELTGL V +A+GK + LV+ S + V+R+LY+AL G+EEQN++ ++KT G +++
Sbjct: 658 AKVSELTGLPVSEAMGKSLVKDLVQRESREAVERVLYMALNGEEEQNVEIQLKTWGPQLH 717
Query: 702 D--DPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
+ L+VNACASRD+ ++VVGVCFV QD+T +K V+DKF RI+GDY IV++ N LI
Sbjct: 718 SHGGTVILVVNACASRDVSESVVGVCFVGQDVTGEKEVLDKFIRIQGDYTTIVRSRNSLI 777
Query: 760 PPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGI 819
PPIFGSDE+G C EWNPAM KLTG +RE+VI ++L+ +VFG+ + RL+ + I
Sbjct: 778 PPIFGSDEYGCCTEWNPAMEKLTGVRREDVIGRMLMGDVFGSAL---RLRGSDGLTQFMI 834
Query: 820 VLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQAL 879
VLN+AM G D +K PF F+ R GK + LL NK+ D +GA+TGVFCFL S ELQQAL
Sbjct: 835 VLNRAMDGADTDKFPFTFYDREGKCVDSLLTANKRTDADGAITGVFCFLHTVSLELQQAL 894
Query: 880 HVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQ 939
VQ+ +E+ A + K LAY +++I+NPL GI F+R +E TEL +QK+L+ TSA C++Q
Sbjct: 895 SVQKAAERVAEAKAKELAYIRQEIQNPLDGIHFARSFIEHTELSEDQKQLMETSATCEKQ 954
Query: 940 LHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSE 999
L +ILDD DL+SI +GYL+LE EF + V+ + +SQ M++S+ KG+++ +T + S
Sbjct: 955 LRRILDDMDLESIEEGYLELETGEFMMATVMNSVVSQGMVQSSKKGLQLFCDTPPEFKSM 1014
Query: 1000 TLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
++GD +RLQQVLADFL ++ F P G + + L + +A++E R
Sbjct: 1015 CVFGDQVRLQQVLADFLMNAVQFTPASGWVEIKVVPNVRSLPGGITMAHMEFR 1067
>gi|212722792|ref|NP_001131622.1| uncharacterized protein LOC100192976 [Zea mays]
gi|37926916|gb|AAP06791.1| phytochrome C2 apoprotein [Zea mays]
gi|413933056|gb|AFW67607.1| phytochromeC2 [Zea mays]
Length = 1135
Score = 1195 bits (3091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/1060 (55%), Positives = 775/1060 (73%), Gaps = 16/1060 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++R S S++ +S+HSARV+AQT +DA+LHADFE S FDYS+SV G +P
Sbjct: 5 SNNRGTCSRSSSARSKHSARVVAQTPVDAQLHADFEGSQRHFDYSSSV------GAANRP 58
Query: 62 RSDRVT-TAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
+ T + YL ++Q+G+ IQPFGCLLA+ TF ++AYSENAPE+L + HAVP++
Sbjct: 59 SASTSTVSTYLQNMQRGRYIQPFGCLLAVHPDTFALLAYSENAPEMLDLTPHAVPTIDQR 118
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
L IG+D++T+F + S+ AL KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+I
Sbjct: 119 DALTIGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVI 178
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
D EP P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVM
Sbjct: 179 DLEPFNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVM 238
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHED+HGEV+SE +S LEPYLGLHYPATDIPQA+RFLFMKNK+RMI D A V +
Sbjct: 239 AYKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKMRMICDFSATPVLI 298
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQ 356
+QD L ++LCGSTLRA H CH QYM NM S+ASLVM+V +ND+EEE +T P+
Sbjct: 299 IQDGSLAQPVSLCGSTLRASHGCHAQYMANMGSVASLVMSVTINDDEEEDGDTDSDQQPK 358
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF I ++KE+EL Q E++ILRTQTLL
Sbjct: 359 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLSKEVELAAQAKERHILRTQTLL 417
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDML+RDA +GI TQSPN+MDLVKCDGAAL Y+N++ LG TP++ ++ I +WL E H
Sbjct: 418 CDMLLRDALVGIFTQSPNVMDLVKCDGAALYYQNQVLVLGSTPSESEIKSIATWLQENHD 477
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP- 535
STGLS DSL +AGY GA AL +VVCGM A++IS K+ IFWFRS T E++W GAKHEP
Sbjct: 478 GSTGLSTDSLVEAGYPGAAALREVVCGMVAIKISSKNFIFWFRSHTTKEIKWSGAKHEPF 537
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
D D+GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR++ + + +S
Sbjct: 538 DADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRDSLQGEDANRNNIRS 597
Query: 596 IHSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
I D K++G+ EL VT+EMVRLIETAT P+LAVD+ G +NGWN K AELTGL V
Sbjct: 598 IVKAPSDDMKKLQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNKKAAELTGLPV 657
Query: 654 DKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
+AIG+ + LV S++ VK++L ALQG EEQN++ ++KT + P+ L++N+C
Sbjct: 658 MEAIGRPLIDLVVADSVEVVKQILDSALQGIEEQNLEIKLKTFHEQECCGPVILMINSCC 717
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
SRDL + V+GVCFVAQD+T QK +MDK+TRI+GDY AI++NP+ LIPPIF ++ G C E
Sbjct: 718 SRDLSEKVIGVCFVAQDLTRQKMIMDKYTRIQGDYVAIIKNPSELIPPIFMINDLGSCLE 777
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM K+TG KRE+ I+KLL+ EVF + CR+K+ L I++N +SGQDPEK+
Sbjct: 778 WNKAMQKITGMKREDAINKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKL 837
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
FGFF GKY E LL VNK+ + EG +TG CFL +AS ELQ AL VQ++SEQ A
Sbjct: 838 LFGFFGTGGKYIESLLTVNKRTNAEGKITGALCFLHVASPELQHALEVQKMSEQAATNSF 897
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K L Y ++++RNPL+G+ F+ +++ +EL +Q++L+ ++ CQ QL KIL D+DL+SI
Sbjct: 898 KELTYIRQELRNPLNGMQFTYNLLKPSELTEDQRQLVSSNVLCQDQLKKILHDTDLESIE 957
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
Y++ VEF L E L + Q + K I I + ++ +YGD+IRLQQVLA
Sbjct: 958 QCYMETNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEVSHMYIYGDNIRLQQVLA 1017
Query: 1014 DFLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
D+L+ ++ F P G +++ K+ +G + +A+LE R
Sbjct: 1018 DYLACALQFTQPAEGHIVLQVIPKKENIGSGMQIAHLEFR 1057
>gi|225431962|ref|XP_002278263.1| PREDICTED: phytochrome B-like [Vitis vinifera]
Length = 1129
Score = 1194 bits (3090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/1062 (54%), Positives = 768/1062 (72%), Gaps = 26/1062 (2%)
Query: 3 SSRPAQSSSNTG-KSRHS---ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTA 55
S AQSS + + H+ ++ IAQ T+DA+LHA +E SG SFDYS SVR ++ +
Sbjct: 10 SHHQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGESGKSFDYSQSVRTTTQS 69
Query: 56 GGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVP 115
+QQ TAYL IQ+G IQPFGC+LA+DE TF+VIA+SENA E+L + +VP
Sbjct: 70 VPEQQ------ITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTPQSVP 123
Query: 116 SVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
S+ +L +G+D++T+FT SA L+KA G E++LLNP+ +H K SGKPFYAI+HR+
Sbjct: 124 SLEKPEILLVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRID 183
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID EP + + ++ AGA+QS KLA +AI+ LQSLP G + LC+T+++ V ELTG
Sbjct: 184 VGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCETVVENVRELTG 243
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM YKFHED+HGEVV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A
Sbjct: 244 YDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHA 303
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE---GDN 352
V V+QDE L L L GSTLRAPH CH QYM NM S ASL MAV++N +EE G N
Sbjct: 304 TPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIINGNDEEAIGGRN 363
Query: 353 TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRT 412
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++LRT
Sbjct: 364 LM-----RLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRT 418
Query: 413 QTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLS 472
QTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL + K + GVTP + Q+ DI WL
Sbjct: 419 QTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYCQGKYYPTGVTPTEAQIKDIAEWLL 478
Query: 473 EYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
H DSTGLS DSL DAGY GA +LGD VCGMA I+ +D +FWFRS TA E++WGGAK
Sbjct: 479 ANHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGGAK 538
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD 592
H P++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++FKD
Sbjct: 539 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGSNS 598
Query: 593 TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLS 652
+H++L +L+++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLS
Sbjct: 599 KAVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLS 658
Query: 653 VDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNA 711
V++A+GK + LV S +TV ++L+ ALQG+E++N++ +++T S+ + + ++VNA
Sbjct: 659 VEEAMGKSLVHDLVYKESEETVDKLLHHALQGEEDKNVEIKLRTFDSQQHKKAVFVVVNA 718
Query: 712 CASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWC 771
C+SRD +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF SDE C
Sbjct: 719 CSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVC 778
Query: 772 CEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPE 831
EWN AM KLTGW R ++I K+L+ E+FG++ CRLK +A IVL+ A+ GQD +
Sbjct: 779 SEWNTAMEKLTGWSRGDIIGKMLVGEIFGSS---CRLKGPDALTKFMIVLHNAIGGQDTD 835
Query: 832 KVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALK 891
K PF FF +NGKY + LL NK+++ EG + G FCFLQ+AS ELQQAL VQR E+
Sbjct: 836 KFPFSFFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFA 895
Query: 892 RLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDS 951
R+K LAY ++I+NPLSGI F+ ++E T+L +QK+ L TSA C++Q+ KI+ D DLDS
Sbjct: 896 RMKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVDLDS 955
Query: 952 IIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQV 1011
I DG L+LE EF L V+ A +SQVM+ + ++++ + E++ + +YGD +R+QQV
Sbjct: 956 IEDGSLELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVRIQQV 1015
Query: 1012 LADFLSISINFVPN-GGQLMVSSSLTKDQLGQSVHLAYLELR 1052
LADFL + + P+ G + + Q+ + V L ++E R
Sbjct: 1016 LADFLLNMVRYAPSPDGWIEIQVHPRLKQISEEVKLMHIEFR 1057
>gi|224101559|ref|XP_002312330.1| predicted protein [Populus trichocarpa]
gi|222852150|gb|EEE89697.1| predicted protein [Populus trichocarpa]
Length = 1142
Score = 1194 bits (3088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 577/1063 (54%), Positives = 768/1063 (72%), Gaps = 29/1063 (2%)
Query: 4 SRPAQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSST 54
++ AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR +S
Sbjct: 16 NQAAQSSGTSNMRQHHHATESVSKAIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQ 75
Query: 55 AGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAV 114
+ ++Q TAYL IQ+G IQPFGC++A+DE +F+VIAYSENA E+L + +V
Sbjct: 76 SVPEEQ------ITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGLTPQSV 129
Query: 115 PSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRV 174
PS+ +L G+D++T+F S++ L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 130 PSLDKQEILSDGTDVRTLFRPSSSAMLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRI 189
Query: 175 TGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELT 234
++ID EP + + ++ AGA+QS KLA ++I++LQSLP G ++ LCDT+++ V ELT
Sbjct: 190 DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESVRELT 249
Query: 235 GYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 294
GYDRVM YKFHED+HGEVV+E ++ LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC
Sbjct: 250 GYDRVMVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCH 309
Query: 295 ARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE---GD 351
A V+V+QDE L L L GSTLRAPH CH QYM NM SIASL MAV++N EEE G
Sbjct: 310 ATPVRVIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEEAIGGR 369
Query: 352 NTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILR 411
N+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++LR
Sbjct: 370 NS-----TRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLR 424
Query: 412 TQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWL 471
TQTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL
Sbjct: 425 TQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWL 484
Query: 472 SEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
H DSTGLS DSL DAGY GA +LG+ VCGMA I+ +D +FWFRS TA E++WGGA
Sbjct: 485 LALHGDSTGLSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGA 544
Query: 532 KHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDL 591
KH P++KDDG++MHPRSSFKAFLEVVK+RSL W++ EMDAIHSLQLILR++F+DV +
Sbjct: 545 KHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDVEATN- 603
Query: 592 DTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGL 651
+H++L D +++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGL
Sbjct: 604 SKAVVHAQLEDTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGL 663
Query: 652 SVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVN 710
SVDKA+GK + LV +TV ++L+ AL+G+E++N++ +++T GS+ + ++VN
Sbjct: 664 SVDKAMGKSLVHDLVYKEYEETVDKLLHRALRGEEDKNVEIKLRTFGSEHQKKALFVVVN 723
Query: 711 ACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGW 770
AC+S+D +N+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNPLIPPIF SDE
Sbjct: 724 ACSSKDYMNNIVGVCFVGQDVTGQKVVMDKYVHIQGDYKAIVHSPNPLIPPIFASDENTC 783
Query: 771 CCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDP 830
C EWN AM K TGW R EVI K+L+ EVFG+ CC+LK +A I L+ A+ GQD
Sbjct: 784 CLEWNTAMEKFTGWSRGEVIGKMLVGEVFGS---CCQLKGSDALTKFMIALHNAIGGQDT 840
Query: 831 EKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTAL 890
+K+PF FF RNGKY + LL NK+++ EG + G FCFLQ+AS+ELQQAL VQR E+
Sbjct: 841 DKLPFSFFDRNGKYVQALLTANKRVNMEGEIVGAFCFLQIASNELQQALKVQRQQEKKCS 900
Query: 891 KRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLD 950
R+K LAY ++IRNPLSG+ F+ ++E T+L +QK+ L TSA C++Q+ KI D DL+
Sbjct: 901 ARMKELAYICQEIRNPLSGLRFTNSLLENTDLTEDQKQFLETSAACEKQILKITRDVDLE 960
Query: 951 SIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQ 1010
SI +G L+LE EF V+ A +SQ M+ + ++++ + E+I + +YGD R+QQ
Sbjct: 961 SIENGLLELEKAEFLFGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLVVYGDQARIQQ 1020
Query: 1011 VLADFLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
VLADFL + + P + G + + T Q+ L ++E +
Sbjct: 1021 VLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHMEFK 1063
>gi|189409279|gb|ACC60966.1| phytochrome B [Vitis vinifera]
Length = 1129
Score = 1192 bits (3085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/1062 (54%), Positives = 768/1062 (72%), Gaps = 26/1062 (2%)
Query: 3 SSRPAQSSSNTG-KSRHS---ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTA 55
S AQSS + + H+ ++ IAQ T+DA+LHA +E SG SFDYS SVR ++ +
Sbjct: 10 SHHQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGESGKSFDYSQSVRTTTQS 69
Query: 56 GGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVP 115
+QQ TAYL IQ+G IQPFGC+LA+DE TF+VIA+SENA E+L + +VP
Sbjct: 70 VPEQQ------ITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTPQSVP 123
Query: 116 SVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
S+ +L +G+D++T+FT SA L+KA E++LLNP+ +H K SGKPFYAI+HR+
Sbjct: 124 SLEKPEILLVGTDVRTLFTPSSAVLLEKAFRAREITLLNPVWIHSKNSGKPFYAILHRID 183
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID EP + + ++ AGA+QS KLA +AI+ LQSLP G + LC+T+++ V ELTG
Sbjct: 184 VGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCETVVENVRELTG 243
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM YKFHED+HGEVV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A
Sbjct: 244 YDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHA 303
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE---GDN 352
V V+QDE L L L GSTLRAPH CH QYM NM S ASL MAV++N +EE G N
Sbjct: 304 TPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIINGSDEEAIGGRN 363
Query: 353 TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRT 412
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++LRT
Sbjct: 364 LM-----RLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRT 418
Query: 413 QTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLS 472
QTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ K + GVTP + Q+ DI WL
Sbjct: 419 QTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPTGVTPTEAQIKDIAEWLL 478
Query: 473 EYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
H DSTGLS DSL DAGY GA +LGD VCGMA I+ +D +FWFRS TA E++WGGAK
Sbjct: 479 ANHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGGAK 538
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD 592
H P++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++FKD
Sbjct: 539 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGSNS 598
Query: 593 TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLS 652
+H++L +L+++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLS
Sbjct: 599 KAVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLS 658
Query: 653 VDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNA 711
V++A+GK + LV S +TV ++L+ AL+G+E++N++ +++T S+ + + ++VNA
Sbjct: 659 VEEAMGKSLVHDLVYKESEETVDKLLHHALRGEEDKNVEIKLRTFDSQQHKKAVFVVVNA 718
Query: 712 CASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWC 771
C+SRD +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF SDE C
Sbjct: 719 CSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVC 778
Query: 772 CEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPE 831
EWN AM KLTGW R ++I K+L+ E+FG++ CRLK +A IVL+ A+ GQD +
Sbjct: 779 SEWNTAMEKLTGWSRGDIIGKILVGEIFGSS---CRLKGPDALTKFMIVLHNAIGGQDTD 835
Query: 832 KVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALK 891
K PF FF +NGKY + LL NK+++ EG + G FCFLQ+AS ELQQAL VQR E+
Sbjct: 836 KFPFSFFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFA 895
Query: 892 RLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDS 951
R+K LAY ++I+NPLSGI F+ ++E T+L +QK+ L TSA C++Q+ KI+ D DLDS
Sbjct: 896 RMKELAYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVDLDS 955
Query: 952 IIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQV 1011
I DG L+LE EF L V+ A +SQVM+ + ++++ + E++ + +YGD +R+QQV
Sbjct: 956 IEDGSLELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVRIQQV 1015
Query: 1012 LADFLSISINFVPN-GGQLMVSSSLTKDQLGQSVHLAYLELR 1052
LADFL + + P+ G + + Q+ + V L ++E R
Sbjct: 1016 LADFLLNMVRYAPSPDGWIEIQVCPRLKQISEEVKLMHIEFR 1057
>gi|10954091|gb|AAG25725.1|AF309806_1 phytochrome B1 [Populus trichocarpa]
Length = 1151
Score = 1191 bits (3080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 577/1063 (54%), Positives = 767/1063 (72%), Gaps = 29/1063 (2%)
Query: 4 SRPAQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSST 54
++ AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR +S
Sbjct: 16 NQAAQSSGTSNMRQHHHATESVSKAIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQ 75
Query: 55 AGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAV 114
+ ++Q TAYL IQ+G IQPFGC++A+DE +F+VIAYSENA E+L + +V
Sbjct: 76 SVPEEQ------ITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGLTPQSV 129
Query: 115 PSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRV 174
PS+ +L G+D++T+F S++ L+KA G E+ LLNPI +H K SGKPFYAI+HR+
Sbjct: 130 PSLDKQEILSDGTDVRTLFRPSSSAMLEKAFGAREIILLNPIWIHSKNSGKPFYAILHRI 189
Query: 175 TGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELT 234
++ID EP + + ++ AGA+QS KLA ++I++LQSLP G ++ LCDT+++ V ELT
Sbjct: 190 DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESVRELT 249
Query: 235 GYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 294
GYDRVM YKFHED+HGEVV+E ++ LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC
Sbjct: 250 GYDRVMVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCH 309
Query: 295 ARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE---GD 351
A V+V+QDE L L L GSTLRAPH CH QYM NM SIASL MAV++N EEE G
Sbjct: 310 ATPVRVIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEEAIGGR 369
Query: 352 NTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILR 411
N+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++LR
Sbjct: 370 NS-----TRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLR 424
Query: 412 TQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWL 471
TQTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL
Sbjct: 425 TQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWL 484
Query: 472 SEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
H DSTGLS DSL DAGY GA +LG+ VCGMA I+ +D +FWFRS TA E++WGGA
Sbjct: 485 LALHGDSTGLSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGA 544
Query: 532 KHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDL 591
KH P++KDDG++MHPRSSFKAFLEVVK+RSL W++ EMDAIHSLQLILR++F+DV +
Sbjct: 545 KHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDVEATN- 603
Query: 592 DTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGL 651
+H++L D +++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGL
Sbjct: 604 SKAVVHAQLEDTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGL 663
Query: 652 SVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVN 710
SVDKA+GK + LV +TV ++L+ AL+G+E++N++ +++T GS+ + ++VN
Sbjct: 664 SVDKAMGKSLVHDLVYKEYEETVDKLLHRALRGEEDKNVEIKLRTFGSEHQKKALFVVVN 723
Query: 711 ACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGW 770
AC+S+D +N+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNPLIPPIF SDE
Sbjct: 724 ACSSKDYMNNIVGVCFVGQDVTGQKVVMDKYVHIQGDYKAIVHSPNPLIPPIFASDENTC 783
Query: 771 CCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDP 830
C EWN AM K TGW R EVI K+L+ EVFG+ CC+LK +A I L+ A+ GQD
Sbjct: 784 CLEWNTAMEKFTGWSRGEVIGKMLVGEVFGS---CCQLKGSDALTKFMIALHNAIGGQDT 840
Query: 831 EKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTAL 890
+K+PF FF RNGKY + LL NK+++ EG + G FCFLQ+AS+ELQQAL VQR E+
Sbjct: 841 DKLPFSFFDRNGKYVQALLTANKRVNMEGEIVGAFCFLQIASNELQQALKVQRQQEKKCS 900
Query: 891 KRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLD 950
R+K LAY ++IRNPLSG+ F+ ++E T+L +QK+ L TSA C++Q+ KI D DL+
Sbjct: 901 ARMKELAYICQEIRNPLSGLRFTNSLLENTDLTEDQKQFLETSAACEKQILKITRDVDLE 960
Query: 951 SIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQ 1010
SI +G L+LE EF V+ A +SQ M+ + ++++ + E+I + +YGD R+QQ
Sbjct: 961 SIENGLLELEKAEFLFGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLVVYGDQARIQQ 1020
Query: 1011 VLADFLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
VLADFL + + P + G + + T Q+ L ++E +
Sbjct: 1021 VLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHMEFK 1063
>gi|6671484|gb|AAC49301.2| phytochrome F [Solanum lycopersicum]
Length = 1118
Score = 1191 bits (3080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1032 (54%), Positives = 759/1032 (73%), Gaps = 9/1032 (0%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
VIAQT +DAKLH +FE S FDYS+SV +S++ P S + YL +Q+G LIQ
Sbjct: 26 VIAQTPVDAKLHVEFEESEQQFDYSSSVNLSNSTSN--VPSS--TVSDYLQKMQRGSLIQ 81
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGC++A+D + F VIAYSENAPE+L + HAVPS+ L G+D++ +F + ASAL
Sbjct: 82 PFGCMIAIDAQNFAVIAYSENAPEMLDLTPHAVPSIEQQEALTFGTDVRKLFRSSGASAL 141
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
+KA+ FGE+SLLNPILVHCK SGKPFYAI+HR+ L+ID EPV P+EVP+T AGA++SY
Sbjct: 142 EKAVSFGELSLLNPILVHCKNSGKPFYAILHRIEVGLVIDLEPVDPHEVPVTTAGAIKSY 201
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI +LQSLPSG + LCD +++EV LTGYDRVM YKFHED+HGEVV+E L
Sbjct: 202 KLAAKAIRKLQSLPSGDISLLCDVLVREVSHLTGYDRVMVYKFHEDEHGEVVAECRTPEL 261
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A ++V+QD +L L+L GSTLRAPH
Sbjct: 262 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPIRVIQDPRLAQSLSLGGSTLRAPH 321
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRY 381
CH QYM NM ++AS+ M+V++N++++E D+ Q ++LWGLVVCH+T PRF+ FPLRY
Sbjct: 322 GCHAQYMTNMGTVASMAMSVMINEQDDELDSD-QQVGRKLWGLVVCHHTCPRFLSFPLRY 380
Query: 382 ACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKC 441
A EFL QVF++ VNKE+E+ Q+ EK IL+ QT+LCDML+RDAP+GIVTQSPN+MDLVKC
Sbjct: 381 ASEFLLQVFSVQVNKEVEMAAQLKEKQILQIQTVLCDMLLRDAPMGIVTQSPNVMDLVKC 440
Query: 442 DGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVV 501
DGAAL Y+NK+W GVTP + Q+ DI WL+E H DSTGL+ DSL +AG+ GA LGD V
Sbjct: 441 DGAALYYRNKLWLHGVTPAESQIRDIAEWLNESHGDSTGLNTDSLMEAGFPGASVLGDAV 500
Query: 502 CGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRS 561
CGMAAV+I+ KD +FWFRS TA E++WGGAKH P +KDDGRKMHPRSSFKAFLEVVK RS
Sbjct: 501 CGMAAVKITSKDFLFWFRSHTAKEIKWGGAKHLPGDKDDGRKMHPRSSFKAFLEVVKRRS 560
Query: 562 LPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRL 621
LPW+D EMDAIHSLQLILR + +D D ++ D I+ + L ++MVRL
Sbjct: 561 LPWEDVEMDAIHSLQLILRGSLQDEAA-DCSKMIVNVPAVDTIIDRVDTLH--INDMVRL 617
Query: 622 IETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLAL 681
+ETA++P+LAVD G +NGWN+K++ELTGL V+ IG + LV + +T+KR+L LAL
Sbjct: 618 VETASMPVLAVDTSGRINGWNSKVSELTGLPVENVIGVPLVDLVIGGTTNTIKRVLSLAL 677
Query: 682 QGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKF 741
QG+EE+N++ +++T G + I+++VNAC SRD N+VGVCF +D+T K + DK+
Sbjct: 678 QGKEEKNVEIKLRTLGPQEKVGSISIVVNACCSRDFKQNIVGVCFTGKDVTGLKLIKDKY 737
Query: 742 TRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGT 801
+R++GDY I+ +P+PLIPPIF DE G C EWN AM KLTG KREEVID++LL EVF
Sbjct: 738 SRVQGDYVGIIHSPSPLIPPIFVMDEQGRCVEWNDAMHKLTGSKREEVIDQMLLGEVFTV 797
Query: 802 NMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAV 861
N CR+K+Q+ L I+LN+ ++G + EK+ FG F + KY E L+ NKK+D +G V
Sbjct: 798 NSFGCRVKDQDTLTQLTILLNRVIAGGEGEKLFFGLFNKQDKYIEALISANKKVDDDGRV 857
Query: 862 TGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTE 921
TGV CFL + S ELQ A+HVQ+LSEQ A LK LAY + +++NPL+GI + +++ ++
Sbjct: 858 TGVLCFLHVPSPELQYAMHVQKLSEQAAKNSLKKLAYVRLELKNPLNGINCIQNLLKSSD 917
Query: 922 LGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKS 981
L +Q++LL TS CQ+QL KI+DD+D++SI + Y ++ EF L EV+ I+QVM+ S
Sbjct: 918 LSKDQRQLLKTSTMCQKQLAKIIDDTDIESIEECYTEMNSCEFNLGEVVTVVINQVMILS 977
Query: 982 NAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVP-NGGQLMVSSSLTKDQL 1040
+ +++ ++ ++ L GD++RLQQVL+DFL+ +I F P + K+++
Sbjct: 978 QERKVQVTWDSPVEVSQLYLIGDNLRLQQVLSDFLTTAILFTPFEDSSVHFRVIPRKERI 1037
Query: 1041 GQSVHLAYLELR 1052
G +++ +LE R
Sbjct: 1038 GTKMYIMHLEFR 1049
>gi|57281885|emb|CAC85513.1| phytochrome A [Triticum aestivum]
Length = 807
Score = 1190 bits (3079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/803 (68%), Positives = 673/803 (83%), Gaps = 17/803 (2%)
Query: 83 FGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQ 142
FGCLLALDEK+F VIA+SENAPE+LT V+HAVPSV D P L IG++++++FT A+AL
Sbjct: 1 FGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVNDPPRLDIGTNVRSLFTDQGATALH 60
Query: 143 KALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYK 202
KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPV P E P +AAGALQSYK
Sbjct: 61 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPASAAGALQSYK 120
Query: 203 LAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLE 262
LAAKAI+++Q+LP GS+E LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK GLE
Sbjct: 121 LAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKPGLE 180
Query: 263 PYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHS 322
PYLGLHYPATDIPQAARFLFMKNKVRMI D R+R +KV++DE LPFD++LCGS LRA HS
Sbjct: 181 PYLGLHYPATDIPQAARFLFMKNKVRMICDVRSRSIKVIEDEALPFDISLCGSALRAAHS 240
Query: 323 CHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLP---QKRKRLWGLVVCHNTTPRFVPF 377
CHLQYMENMNSIASLVMAVVVN+ EE+ + + P Q++K LWGLVVCH+ +PR+VPF
Sbjct: 241 CHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQQKKILWGLVVCHHESPRYVPF 300
Query: 378 PLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSPNIM 436
PLRYACEFLAQVFA+HVNKE E++ Q+ EK+ILRTQT+L DML ++A PL IV+ +PNIM
Sbjct: 301 PLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRTQTILSDMLFKEASPLTIVSGAPNIM 360
Query: 437 DLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALA 496
DL+KCDGAALLY +K+WRLG P + Q+ D+ WLSE HMDSTGLS +SL+DAGY GA A
Sbjct: 361 DLIKCDGAALLYGDKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLHDAGYPGASA 420
Query: 497 LGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEV 556
LGD VCGMA +I+ D++FWFRS TA E+RWGGAK++P ++DD R+MHPR SFKAFLEV
Sbjct: 421 LGDSVCGMAVAKINSSDILFWFRSHTAQEIRWGGAKNDPSDQDDSRRMHPRLSFKAFLEV 480
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK-----SIHSKLCDLKIEGMKEL 611
VK +SL W D EMDAIHSLQLILR GT+D K S+ ++ DLK++G+ EL
Sbjct: 481 VKMKSLAWTDSEMDAIHSLQLILR------GTVDGVVKPTGKASLDEQIGDLKLDGLAEL 534
Query: 612 EAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSID 671
+AVTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVE+SS+
Sbjct: 535 QAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVS 594
Query: 672 TVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDI 731
V+RMLYLALQG+EE+ ++FE+KTHG K +D P+ L+VNACASRDLHD+VVGVCFVAQD+
Sbjct: 595 VVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDDVVGVCFVAQDV 654
Query: 732 TPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVID 791
T K VMDKFTR+EGDY AI+ NPNPLIPPIFG+DEFGWCCEWN AM KLTGW REEV++
Sbjct: 655 TVHKLVMDKFTRVEGDYMAIIHNPNPLIPPIFGADEFGWCCEWNAAMTKLTGWHREEVLN 714
Query: 792 KLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCV 851
K+LL EVF ++ A C LKN++AFV+L +V+N A++G++ EK PFGFF R+GKY +CLL V
Sbjct: 715 KMLLGEVFDSSNASCLLKNKDAFVSLCVVINSALAGEETEKAPFGFFDRSGKYTDCLLSV 774
Query: 852 NKKLDREGAVTGVFCFLQLASHE 874
N++ + G +TGVFCF+ + SHE
Sbjct: 775 NRRENEGGLITGVFCFIHIPSHE 797
>gi|85679505|gb|ABC72086.1| phytochrome B [Solanum tuberosum]
Length = 1130
Score = 1186 bits (3068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/1034 (55%), Positives = 759/1034 (73%), Gaps = 27/1034 (2%)
Query: 3 SSRPAQSS--SNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
+S AQSS SN ++ IAQ T DA+LHA FE SG S FDYS SV+ ++
Sbjct: 13 NSSQAQSSGTSNVNYKDSISKAIAQYTADARLHAVFEQSGESGKFFDYSESVKTTT---- 68
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
Q +R TAYL IQ+G IQPFGC++A+DE +F+VIAYSENA E+L++ +VPS+
Sbjct: 69 --QSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENAFEMLSLTPQSVPSL 126
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L IG+D++T+FT S+ L++A G E++LLNPI +H K SGKPFYAI+HRV
Sbjct: 127 EKCEILTIGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVG 186
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
+ ID EP + + ++ AGA+QS KLA +AI+ LQSLP G ++ LCDT+++ V ELTGYD
Sbjct: 187 IAIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYD 246
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A
Sbjct: 247 RVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATP 306
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE----GDNT 353
V+V QDE L L L GSTLRAPH CH QYM NM SIASL +AV++N +EE G N+
Sbjct: 307 VRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGGRNS 366
Query: 354 LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
+ RLWGLVV H+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++LRTQ
Sbjct: 367 M-----RLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQ 421
Query: 414 TLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSE 473
TLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ K + LGVTP + Q+ DIV WL
Sbjct: 422 TLLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEWLLA 481
Query: 474 YHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKH 533
YH DSTGLS DSL DAGY GA +LGD VCGMA IS KD +FWFRS TA E++WGGAKH
Sbjct: 482 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYISSKDFLFWFRSHTAKEIKWGGAKH 541
Query: 534 EPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDT 593
P++KDDG +MHPRSSFKAFLEVVK+RS PW++ EMDAIHSLQLILR++FKD ++
Sbjct: 542 HPEDKDDGLRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEA--SNS 599
Query: 594 KSI-HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLS 652
K+I H+ L +++++G+ EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLS
Sbjct: 600 KAIVHAHLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLS 659
Query: 653 VDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNA 711
V++A+GK + LV S +T +++LY AL+G+E++N++ +++T G++ + + ++VNA
Sbjct: 660 VEEAMGKSLVHELVYKESQETAEKLLYNALRGEEDKNVEIKLRTFGAEQLEKAVFVVVNA 719
Query: 712 CASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWC 771
CAS+D +N+VGVCFV QD+T +K VMDKF I+GDYKAIV +PNPLIPPIF SDE C
Sbjct: 720 CASKDYTNNIVGVCFVGQDVTGEKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDENTCC 779
Query: 772 CEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPE 831
EWN AM KLTGW R E++ K+L+ E+FG+ CCRLK +A IVL+ A+ GQD +
Sbjct: 780 SEWNTAMEKLTGWSRGEIVGKMLVGEIFGS---CCRLKGPDAMTKFMIVLHNAIGGQDTD 836
Query: 832 KVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALK 891
K PF FF RNGKY + LL NK+++ EG G FCF+Q+AS ELQQAL VQR E+
Sbjct: 837 KFPFSFFDRNGKYVQALLTANKRVNMEGNTIGAFCFIQIASPELQQALRVQRQQEKKCYS 896
Query: 892 RLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDS 951
++K LAY ++I++PL+GI F+ ++E T L QK+ L TSA C+RQ+ KI+ D DL++
Sbjct: 897 QMKELAYICQEIKSPLNGIRFTNSLLEATNLTENQKQYLETSAACERQMSKIIRDVDLEN 956
Query: 952 IIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQV 1011
I DG L LE +F L V+ A +SQVM+ KG++++ + E+I + T++GD +R+QQV
Sbjct: 957 IEDGSLTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQQV 1016
Query: 1012 LADFLSISINFVPN 1025
LADFL + + P+
Sbjct: 1017 LADFLLNMVRYAPS 1030
>gi|33302622|sp|P34094.2|PHYB_SOLTU RecName: Full=Phytochrome B
gi|2326872|emb|CAA74908.1| phytochrome B [Solanum tuberosum]
Length = 1130
Score = 1184 bits (3063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 576/1053 (54%), Positives = 768/1053 (72%), Gaps = 26/1053 (2%)
Query: 10 SSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRV 66
+SN ++ IAQ T DA+LHA FE SG S FDYS SV+ ++ Q +R
Sbjct: 22 TSNVNYKDSISKAIAQYTADARLHAVFEQSGESGKFFDYSQSVKTTT------QSVPERQ 75
Query: 67 TTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIG 126
TAYL IQ+G IQPFGC++A+DE +F+VIAYSENA E+L++ +VPS+ +L IG
Sbjct: 76 ITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEMLSLTPQSVPSLEKCEILTIG 135
Query: 127 SDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVK 186
+D++T+FT S+ L++A G E++LLNPI +H K SGKPFYAI+HRV ++ID EP +
Sbjct: 136 TDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVIDLEPAR 195
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
+ ++ AGA+QS KLA +AI+ LQSLP G ++ LCDT+++ V ELTGYDRVM YKFHE
Sbjct: 196 TEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHE 255
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
D+HGEVV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V QDE L
Sbjct: 256 DEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVTQDESL 315
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE----GDNTLPQKRKRLW 362
L L GSTLRAPH CH QYM NM SIASL +AV++N +EE G N++ RLW
Sbjct: 316 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGGRNSM-----RLW 370
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVV H+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++LRTQTLLCDML+R
Sbjct: 371 GLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR 430
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
D+P GIVTQSP+IMDLVKCDGAAL Y+ K + LGVTP + Q+ DIV WL YH DSTGLS
Sbjct: 431 DSPPGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEWLLAYHGDSTGLS 490
Query: 483 ADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
DSL DAGY GA +LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDDG+
Sbjct: 491 TDSLPDAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ 550
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI-HSKLC 601
+MHPRSSFKAFLEVVK+RS PW++ EMDAIHSLQLILR++FKD ++K+I H+ L
Sbjct: 551 RMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEA--SNSKAIVHAHLG 608
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
+++++G+ EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTG+SV++A+GK
Sbjct: 609 EMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGVSVEEAMGKSL 668
Query: 662 L-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ LV S +T +++LY AL+G+E++N++ +++T G++ + + ++VNACAS+D +N
Sbjct: 669 VHDLVYKESQETAEKLLYNALRGEEDKNVEIKLRTFGAEQLEKAVFVVVNACASKDYTNN 728
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVK 780
+VGVCFV QD+T +K VMDKF I+GDYKAIV +PNPLIPPIF SDE C EWN AM K
Sbjct: 729 IVGVCFVGQDVTGEKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEK 788
Query: 781 LTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFAR 840
LTGW R E++ K+L+ E+FG+ CCRLK +A IVL+ A+ GQD +K PF FF R
Sbjct: 789 LTGWSRGEIVGKMLVGEIFGS---CCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDR 845
Query: 841 NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK 900
NGKY + LL NK+++ EG G FCF+Q+AS ELQQAL VQR E+ ++K LAY
Sbjct: 846 NGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYIC 905
Query: 901 RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLE 960
++I++PL+GI F+ ++E T L QK+ L TSA C+RQ+ KI+ D DL++I DG L LE
Sbjct: 906 QEIKSPLNGIRFTNSLLEATNLTENQKQYLETSAACERQMSKIIRDIDLENIEDGSLTLE 965
Query: 961 MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI 1020
+F L V+ A +SQVM+ KG++++ + E+I + T++GD +R+QQVLADFL +
Sbjct: 966 KEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMV 1025
Query: 1021 NFVPN-GGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+ P+ G + + + + V + ++ELR
Sbjct: 1026 RYAPSPDGWVEIQLRPSMMPISDGVTVVHIELR 1058
>gi|449516898|ref|XP_004165483.1| PREDICTED: phytochrome B-like [Cucumis sativus]
Length = 1132
Score = 1181 bits (3056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 577/1067 (54%), Positives = 770/1067 (72%), Gaps = 32/1067 (2%)
Query: 2 SSSRPAQSS-SNTGKSRHS-----ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVS 52
S + AQSS +NT R ++ IAQ T+DA+LHA FE SG SFDYS S++ S
Sbjct: 10 SHQQQAQSSNTNTSNLRSHRTDSISKAIAQYTVDARLHAVFEQSGESGKSFDYSQSIKTS 69
Query: 53 STAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNH 112
+ + +QQ TAYL IQ+G IQPFGC++A++E +F+VIAYSENA ELL +
Sbjct: 70 TQSVPEQQ------ITAYLSKIQRGGHIQPFGCMIAIEEASFRVIAYSENARELLGLTPQ 123
Query: 113 AVPSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVH 172
+VPS+ +L IG+D++ +FT+ SA L+KA G E++LLNP+ +H K SGKPFYAI+H
Sbjct: 124 SVPSLEKPEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWIHSKNSGKPFYAILH 183
Query: 173 RVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFE 232
R+ ++ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V E
Sbjct: 184 RIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRE 243
Query: 233 LTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVD 292
LTGYDRVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVD
Sbjct: 244 LTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVD 303
Query: 293 CRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE--- 349
C A V+V+QD L L L GSTLRAPH CH QYM NM SIASL MAVV+N ++E
Sbjct: 304 CHASPVRVIQDAGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVINGNDDEAIG 363
Query: 350 GDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNI 409
G N+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++
Sbjct: 364 GRNS-----TRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHV 418
Query: 410 LRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVS 469
LRTQTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ K + LGVTP + Q+ DIV
Sbjct: 419 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVE 478
Query: 470 WLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWG 529
WL +H DSTGLS DSL DAGY GA LGD VCGMA I+ KD +FWFRS TA E++WG
Sbjct: 479 WLLAFHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITKKDFLFWFRSHTAKEIKWG 538
Query: 530 GAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTL 589
GAKH P++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++FK+ +
Sbjct: 539 GAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKN--DV 596
Query: 590 DLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
+++K+ +H L DL ++G+ EL +V EMVRLIETAT PI AVD DG +NGWN KIAEL
Sbjct: 597 AINSKAVVHPHLGDLDLQGIDELSSVAREMVRLIETATAPIFAVDADGRINGWNAKIAEL 656
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKIND-DPIT 706
TGL+V++A+GK + LV S +TV R++ AL+G+E++NI+ +++T G + + P
Sbjct: 657 TGLAVEEAMGKSLVRDLVYKESEETVDRLVSRALKGEEDKNIEIKMRTFGPEEDQRTPFF 716
Query: 707 LIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSD 766
++VNAC+SRD DN+VGVCFV QD+T QK MDKF I+GDYKAI+ +PNPLIPPIF SD
Sbjct: 717 VVVNACSSRDYTDNIVGVCFVGQDVTCQKVFMDKFVSIQGDYKAIIHSPNPLIPPIFASD 776
Query: 767 EFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMS 826
+ C EWN AM KLTGW RE++I K+L+ EVFG+ CCRLK +A IVL+ A+
Sbjct: 777 DNTCCSEWNTAMEKLTGWSREDIIGKMLVGEVFGS---CCRLKGPDALTKFMIVLHSAIG 833
Query: 827 GQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSE 886
GQD EK PF F+ + GKY + LL NK+++ EG + G FCFLQ+AS ELQQ L +QR E
Sbjct: 834 GQDNEKYPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFLQIASPELQQTLRMQRQQE 893
Query: 887 QTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDD 946
+ R+K LAY +++++PLSGI F+ ++E T+L +QK+ L TS C++Q+ KI++D
Sbjct: 894 KNRFARMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVACEKQMLKIIED 953
Query: 947 SDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSI 1006
DL+ I DG ++LE EF L V+ A +SQVM+ + ++++ + E++ + +YGD +
Sbjct: 954 MDLECIDDGTMELEKGEFLLGSVINAVVSQVMILLRERSLQLIRDIPEEVKTMAVYGDQV 1013
Query: 1007 RLQQVLADFLSISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
R+QQVLADFL + + P+ G + + Q + LA+ E R
Sbjct: 1014 RIQQVLADFLLNMVRYAPSPEGWVEIRVCPLLKQNSDGITLAHTEFR 1060
>gi|449432920|ref|XP_004134246.1| PREDICTED: phytochrome B-like [Cucumis sativus]
Length = 1132
Score = 1181 bits (3056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 577/1067 (54%), Positives = 770/1067 (72%), Gaps = 32/1067 (2%)
Query: 2 SSSRPAQSS-SNTGKSRHS-----ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVS 52
S + AQSS +NT R ++ IAQ T+DA+LHA FE SG SFDYS S++ S
Sbjct: 10 SHQQQAQSSNTNTSNLRSHRTDSISKAIAQYTVDARLHAVFEQSGESGKSFDYSQSIKTS 69
Query: 53 STAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNH 112
+ + +QQ TAYL IQ+G IQPFGC++A++E +F+VIAYSENA ELL +
Sbjct: 70 TQSVPEQQ------ITAYLSKIQRGGHIQPFGCMIAIEEASFRVIAYSENARELLGLTPQ 123
Query: 113 AVPSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVH 172
+VPS+ +L IG+D++ +FT+ SA L+KA G E++LLNP+ +H K SGKPFYAI+H
Sbjct: 124 SVPSLEKPEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWIHSKNSGKPFYAILH 183
Query: 173 RVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFE 232
R+ ++ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V E
Sbjct: 184 RIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRE 243
Query: 233 LTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVD 292
LTGYDRVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVD
Sbjct: 244 LTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVD 303
Query: 293 CRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE--- 349
C A V+V+QD L L L GSTLRAPH CH QYM NM SIASL MAVV+N ++E
Sbjct: 304 CHASPVRVIQDAGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVINGNDDEAIG 363
Query: 350 GDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNI 409
G N+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++
Sbjct: 364 GRNS-----TRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHV 418
Query: 410 LRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVS 469
LRTQTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ K + LGVTP + Q+ DIV
Sbjct: 419 LRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVE 478
Query: 470 WLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWG 529
WL +H DSTGLS DSL DAGY GA LGD VCGMA I+ KD +FWFRS TA E++WG
Sbjct: 479 WLLAFHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITKKDFLFWFRSHTAKEIKWG 538
Query: 530 GAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTL 589
GAKH P++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++FK+ +
Sbjct: 539 GAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKN--DV 596
Query: 590 DLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
+++K+ +H L DL ++G+ EL +V EMVRLIETAT PI AVD DG +NGWN KIAEL
Sbjct: 597 AINSKAVVHPHLGDLDLQGIDELSSVAREMVRLIETATAPIFAVDADGRINGWNAKIAEL 656
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKIND-DPIT 706
TGL+V++A+GK + LV S +TV R++ AL+G+E++NI+ +++T G + + P
Sbjct: 657 TGLAVEEAMGKSLVRDLVYKESEETVDRLVSRALKGEEDKNIEIKMRTFGPEEDQRTPFF 716
Query: 707 LIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSD 766
++VNAC+SRD DN+VGVCFV QD+T QK MDKF I+GDYKAI+ +PNPLIPPIF SD
Sbjct: 717 VVVNACSSRDYTDNIVGVCFVGQDVTCQKVFMDKFVSIQGDYKAIIHSPNPLIPPIFASD 776
Query: 767 EFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMS 826
+ C EWN AM KLTGW RE++I K+L+ EVFG+ CCRLK +A IVL+ A+
Sbjct: 777 DNTCCSEWNTAMEKLTGWSREDIIGKMLVGEVFGS---CCRLKGPDALTKFMIVLHSAIG 833
Query: 827 GQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSE 886
GQD EK PF F+ + GKY + LL NK+++ EG + G FCFLQ+AS ELQQ L +QR E
Sbjct: 834 GQDNEKYPFSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFLQIASPELQQTLRMQRQQE 893
Query: 887 QTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDD 946
+ R+K LAY +++++PLSGI F+ ++E T+L +QK+ L TS C++Q+ KI++D
Sbjct: 894 KNRFARMKELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVACEKQMLKIIED 953
Query: 947 SDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSI 1006
DL+ I DG ++LE EF L V+ A +SQVM+ + ++++ + E++ + +YGD +
Sbjct: 954 MDLECIDDGTMELEKGEFLLRSVINAVVSQVMILLRERSLQLIRDIPEEVKTMAVYGDQV 1013
Query: 1007 RLQQVLADFLSISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
R+QQVLADFL + + P+ G + + Q + LA+ E R
Sbjct: 1014 RIQQVLADFLLNMVRYAPSPEGWVEIRVCPLLKQNSDGITLAHTEFR 1060
>gi|255556392|ref|XP_002519230.1| phytochrome B, putative [Ricinus communis]
gi|223541545|gb|EEF43094.1| phytochrome B, putative [Ricinus communis]
Length = 1141
Score = 1178 bits (3048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/1056 (54%), Positives = 766/1056 (72%), Gaps = 23/1056 (2%)
Query: 7 AQSSSNTGKSRHS----ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQ 59
AQSS + H+ ++ IAQ T+DA+LHA FE SG SFDYS SVR ++ + +Q
Sbjct: 27 AQSSGTSNLRAHNTESMSKAIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTNQSIAEQ 86
Query: 60 QPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD 119
Q TAYL IQ+G IQPFGC++A+DE +F+VIAYSENA ELL ++ +VPS+
Sbjct: 87 Q------ITAYLSKIQRGGHIQPFGCMIAVDEASFRVIAYSENARELLGLMPQSVPSLEK 140
Query: 120 HPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
+L IG+D++T+FT SA L+KA G E++LLNP+ +H K SGKPFYAI+HR+ ++
Sbjct: 141 PEILSIGTDVRTLFTQSSALLLEKAFGAREITLLNPLWIHSKNSGKPFYAILHRIDVGIV 200
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI++LQSLPSG + LCDT+++ V ELTGYDRV
Sbjct: 201 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPSGDVRLLCDTVVECVRELTGYDRV 260
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +++VRMIVDC A V
Sbjct: 261 MVYKFHEDEHGEVVAENKQPDLEPYIGLHYPATDIPQASRFLFKQSRVRMIVDCHATPVS 320
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK 359
++QDE L L L GSTLRAPH CH QYM NM SIASL MAV++N ++E +
Sbjct: 321 IIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDDEAIGG--RSSM 378
Query: 360 RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDM 419
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTLLCDM
Sbjct: 379 RLWGLVVCHHTSARSIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDM 438
Query: 420 LMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDST 479
L+RD+P GIVTQSP+IMDLVKCDGAAL Y+ K + LGVTP + Q+ DIV WL +H DST
Sbjct: 439 LLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPAEAQIKDIVEWLLAFHGDST 498
Query: 480 GLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKD 539
GLS DSL DAGY GA LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KD
Sbjct: 499 GLSTDSLADAGYPGAALLGDAVCGMAVAYITNKDFLFWFRSHTAKEIKWGGAKHHPEDKD 558
Query: 540 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI-HS 598
D ++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQLILR++F+D ++K++ ++
Sbjct: 559 DSQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQLILRDSFRDAEA--TNSKAVANA 616
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
+L L+++GM EL +V EMVRLIETAT PI AVD+DG +NGWN K+AELTGLSV++A+G
Sbjct: 617 QLRGLELQGMDELSSVAREMVRLIETATAPIFAVDIDGCINGWNAKVAELTGLSVEEAMG 676
Query: 659 KHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
K + L+ S +TV ++L AL+G+E++NI+ +++T G + ++VNAC+S+D
Sbjct: 677 KSLVHDLIYKESKETVDQLLRRALRGEEDKNIEIKMRTFGFGHEKKAVFVVVNACSSKDY 736
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPA 777
+N+VGVCFV QDIT QK VMDKF I+GDY+AIV +PNPLIPPIF SDE C EWN A
Sbjct: 737 MNNIVGVCFVGQDITGQKVVMDKFIHIQGDYRAIVHSPNPLIPPIFASDENTCCLEWNTA 796
Query: 778 MVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGF 837
M KLTGW + E+I K+L+ EVFG+ CCRLK+ + IVL+ A+ GQD +K PF F
Sbjct: 797 MEKLTGWAQGEIIGKMLVGEVFGS---CCRLKSPDVLTRFMIVLHNAIGGQDTDKFPFSF 853
Query: 838 FARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALA 897
F +NGK + LL +K+++ +G + G FCFLQ+AS ELQQAL QR E+ R+K LA
Sbjct: 854 FDKNGKVVQALLTASKRVNMDGQIIGAFCFLQIASPELQQALKAQRQQEKKGFTRMKELA 913
Query: 898 YTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYL 957
Y ++I+NPLSGI F+ ++E T+L +QK+ L TSA C++Q+ KI+ D DL+SI DG L
Sbjct: 914 YICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQILKIIRDVDLESIEDGSL 973
Query: 958 DLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLS 1017
+LE EF L V+ A +SQVM+ + ++++ + ++I + +YGD +R+QQVLADFL
Sbjct: 974 ELEKGEFLLGSVINAVVSQVMLLLRERNLQLIRDIPDEIKTLAVYGDQVRIQQVLADFLL 1033
Query: 1018 ISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
+ P+ G + + T Q+ + + + + E R
Sbjct: 1034 NMVRCAPSSDGWVEIHVHPTLKQITEGLTVMHTEFR 1069
>gi|401782504|dbj|BAM36555.1| phytochrome B [Fragaria x ananassa]
Length = 1136
Score = 1174 bits (3038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1028 (54%), Positives = 755/1028 (73%), Gaps = 19/1028 (1%)
Query: 3 SSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS--GTSFDYSNSVRVSSTAGGDQQ 60
S+ Q+ ++T + ++ +AQ T+DA+LHA FE S G SFDYS S+R + + ++Q
Sbjct: 22 SAGQQQNRNSTAAAESVSKAVAQYTVDARLHAVFEQSESGKSFDYSQSMRSTKDSVPEKQ 81
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
TAYL IQ+G IQPFGC +A+DE TF VIAYSENA +LL M+ +VP +
Sbjct: 82 ------ITAYLSKIQRGGHIQPFGCTIAVDESTFAVIAYSENARDLLDMMPQSVPVMQSR 135
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
+L +G+D +T+F+ S++ L++A G E++LLNPI +H K SGKPFYAI+HR+ ++I
Sbjct: 136 EILTVGTDFRTLFSPSSSTLLEQAFGAREITLLNPIWIHSKISGKPFYAILHRIDVGVVI 195
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
D EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+++ V ELTGYDRVM
Sbjct: 196 DLEPARSEDPALSIAGAVQSQKLAVRAISKLQSLPGGDIKLLCDTVVESVRELTGYDRVM 255
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
YKFHED+HGEV++E ++ LEPYLGLHYPATDIPQA+RFLF +N+VRMIVDC A V+V
Sbjct: 256 VYKFHEDEHGEVLAESKRADLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVQV 315
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
+QDE L L L GSTLRAPH CH QYM NM SIASL +AV++N ++E + R
Sbjct: 316 IQDEGLMQPLCLVGSTLRAPHGCHSQYMANMGSIASLALAVIINGNDDEAIGG--RSSMR 373
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTLLCDML
Sbjct: 374 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQLLEKHVLRTQTLLCDML 433
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
+RD P GIVTQSP+IM+LVKCDGAAL Y++K + +GVTP + Q+ DIV WL H STG
Sbjct: 434 LRDTPTGIVTQSPSIMNLVKCDGAALYYQDKYYPVGVTPTEAQIKDIVEWLLSSHGTSTG 493
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL DAGY GA +LGD VCGMAA I+ +D +FWFRS TA EV+WGGAKH P++KDD
Sbjct: 494 LSTDSLGDAGYPGAASLGDAVCGMAAAYITKRDFLFWFRSHTAKEVKWGGAKHHPEDKDD 553
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD--TKSIHS 598
G++MHPRSSFKAFLEVVK+RSLPW + EMDAIHSLQ+ILR++FKD T +L T++ H
Sbjct: 554 GQRMHPRSSFKAFLEVVKSRSLPWDNAEMDAIHSLQIILRDSFKDAETNNLKAVTENQHG 613
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
DL+I+G+ EL +V EMVRLIETAT PI AVDV+G +NGWN KIAELTGL+V++A G
Sbjct: 614 ---DLEIQGIDELSSVAREMVRLIETATAPIFAVDVNGCINGWNAKIAELTGLAVEEATG 670
Query: 659 KHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
K + LV S + V ++L AL+G+E++N++ +++T G + ++ P+ ++VNAC+S+D
Sbjct: 671 KSLVHDLVYKESEEIVDKLLIHALRGEEDKNVEIKLRTFGPEHDNKPVFVVVNACSSKDY 730
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPA 777
+N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF SD+ C EWN A
Sbjct: 731 TNNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCSEWNNA 790
Query: 778 MVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGF 837
M KLTGW R ++I K+L+ E+FG+ CCRLK +A IVL+ A+ G D +K PF F
Sbjct: 791 MEKLTGWSRGDMIGKMLVGEIFGS---CCRLKGPDAITKFMIVLHNAIGGSDTDKFPFSF 847
Query: 838 FARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALA 897
F RNGKY + LL N++++ +G V G FCFLQ+ S ELQQAL VQR E+ R+K LA
Sbjct: 848 FDRNGKYVQALLTANRRVNVDGQVIGAFCFLQIPSPELQQALRVQRQQEKQCFARMKELA 907
Query: 898 YTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYL 957
Y ++I++PLSGI F+ ++ GTEL +QK+ L TSA C++Q+ KI+ D DL SI DG L
Sbjct: 908 YMCQEIKSPLSGIRFTNSLLGGTELSEDQKQFLETSAACEKQILKIIKDVDLASIEDGSL 967
Query: 958 DLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLS 1017
+LE +F L V+ A +SQVM+ + ++++ + E++ + +YGD +R+QQVLADFL
Sbjct: 968 ELEKEDFLLGSVINAVVSQVMLLLRERNLQLIRDIPEEVKTLAVYGDQVRIQQVLADFLL 1027
Query: 1018 ISINFVPN 1025
+ + P+
Sbjct: 1028 NMVRYAPS 1035
>gi|59798480|sp|Q9ZS62.1|PHYB1_SOLLC RecName: Full=Phytochrome B1
gi|4038600|emb|CAA05293.1| phytochrome B1 [Solanum lycopersicum]
Length = 1131
Score = 1172 bits (3032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/1034 (54%), Positives = 753/1034 (72%), Gaps = 26/1034 (2%)
Query: 2 SSSRPAQSS--SNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAG 56
SS AQSS SN ++ IAQ T DA+LHA FE SG SFDYS SV+ ++
Sbjct: 14 SSQGQAQSSGTSNMNYKDSISKAIAQYTADARLHAVFEQSGESGKSFDYSQSVKTTT--- 70
Query: 57 GDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS 116
Q +R TAYL IQ+G IQPFGC++A+DE +F++IAYSENA E+L++ +VPS
Sbjct: 71 ---QSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRIIAYSENACEMLSLTPQSVPS 127
Query: 117 VGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTG 176
+ +L +G+D++T+FT S+ L++A G E++LLNPI +H K SGKPFYAI+HRV
Sbjct: 128 LDKSEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDV 187
Query: 177 SLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGY 236
++ID EP + + ++ AGA+QS KLA +AI+ LQSLP G ++ LCDT+++ V ELTGY
Sbjct: 188 GIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGY 247
Query: 237 DRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAR 296
DRVM YKFHED+HGEVV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A
Sbjct: 248 DRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHAT 307
Query: 297 HVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE----GDN 352
V+V QDE L L L GSTLRAPH CH QYM NM SIASL +AV++N +EE G N
Sbjct: 308 PVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGGRN 367
Query: 353 TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRT 412
++ RLWGLVV H+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++LRT
Sbjct: 368 SM-----RLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRT 422
Query: 413 QTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLS 472
QTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ K + LGVTP + Q+ DIV WL
Sbjct: 423 QTLLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQRKYYPLGVTPTEAQIKDIVEWLL 482
Query: 473 EYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
YH DSTGLS DSL DAGY GA +LGD VCGMA I+ KD +FWFRS TA E++WGGAK
Sbjct: 483 AYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAK 542
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD 592
H P++KDDG++MHPRSSFKAFLEVVK+RS PW++ EMDAIHSLQLILR++FKD +
Sbjct: 543 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEA--SN 600
Query: 593 TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLS 652
+K+I L +++++G+ EL +V EMVRLIETAT PI VDV+G +NGWN K+ ELTGLS
Sbjct: 601 SKAIVHALGEMELQGIDELSSVAREMVRLIETATAPIFGVDVNGRINGWNEKVVELTGLS 660
Query: 653 VDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNA 711
++A GK + L+ S ++ +++LY AL+G E +N++ +++T G++ + + L+VNA
Sbjct: 661 AEEAKGKSLVHDLLYKESQESAEKLLYNALRGVEGKNVEIKLRTFGAEQVEKAVFLVVNA 720
Query: 712 CASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWC 771
C+SRD +++VGV FV QD+T +K VMDKF I+GDYKAIV +PNPLIPPIF SDE C
Sbjct: 721 CSSRDYTNSIVGVSFVGQDVTGEKIVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTSC 780
Query: 772 CEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPE 831
EWN AM KL+GW REE++ K+L+ E+FG+ CCRLK +A IVL+ A+ GQD +
Sbjct: 781 SEWNTAMEKLSGWSREEIVGKMLVGEIFGS---CCRLKGPDAMTKFMIVLHNAIGGQDTD 837
Query: 832 KVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALK 891
K PF FF RNGKY + LL NK+++ EG G FCF+Q+AS ELQQAL VQR E+
Sbjct: 838 KFPFSFFDRNGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKCYS 897
Query: 892 RLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDS 951
++K LAY +++++PL+GI F+ ++E T L QK+ L TSA C+RQ+ KI+ D DL++
Sbjct: 898 QMKELAYICQEVKSPLNGIRFTNSLLEATNLTEYQKQYLETSAACERQMSKIIRDVDLEN 957
Query: 952 IIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQV 1011
I DG L LE +F L V+ A +SQVM+ KG++++ + E+I + T++GD +R+QQV
Sbjct: 958 IEDGSLTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQQV 1017
Query: 1012 LADFLSISINFVPN 1025
LADFL + + P+
Sbjct: 1018 LADFLLNMVRYAPS 1031
>gi|2370331|emb|CAA74992.1| phytochrome B [Nicotiana plumbaginifolia]
Length = 1135
Score = 1169 bits (3025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1048 (54%), Positives = 756/1048 (72%), Gaps = 16/1048 (1%)
Query: 10 SSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQPRSDRV 66
+SN ++ IAQ T DA+LHA FE SG SFDYS SV+ ++ Q ++
Sbjct: 27 TSNVNYKDSISKAIAQYTADARLHAVFEQSGESGKSFDYSQSVKTTT-----QSVVPEQQ 81
Query: 67 TTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIG 126
TAYL IQ+G IQPFGC++A+DE +F VIAYSENA E+L++ +VPS+ +L +G
Sbjct: 82 ITAYLTKIQRGGHIQPFGCMIAVDEASFGVIAYSENACEMLSLTPQSVPSLERPEILTVG 141
Query: 127 SDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVK 186
+D++T+FT S+ L++A G E++LLNPI +H K SGKPFYAI+HRV ++ID EP K
Sbjct: 142 TDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVIDLEPAK 201
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
+ ++ AGA+QS KLA +AI+ LQSLP G ++ LCDT+++ V ELTGYDRVM YKFHE
Sbjct: 202 TEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKILCDTVVESVRELTGYDRVMVYKFHE 261
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
D+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V+QDE L
Sbjct: 262 DEHGEVVAESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVVQDESL 321
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVV 366
L L GSTLRAPH CH QYM NM SIASL +AV++N +EE + RLWGLVV
Sbjct: 322 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGG--RSSMRLWGLVV 379
Query: 367 CHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPL 426
H+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++LRTQTLLCDML+RD+P
Sbjct: 380 GHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPT 439
Query: 427 GIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSL 486
GIVTQSP+IMDLVKCDGAAL + K + LGVTP + Q+ DIV WL YH DSTGLS DSL
Sbjct: 440 GIVTQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGLSTDSL 499
Query: 487 YDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHP 546
DAGY GA LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDDG++MHP
Sbjct: 500 ADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHP 559
Query: 547 RSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIE 606
RSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++FKD + +H++L +++++
Sbjct: 560 RSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEASN-SMAVVHAQLGEMELQ 618
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL-TLV 665
G+ EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELT LSV++A+GK + LV
Sbjct: 619 GIDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTDLSVEEAMGKSLVHDLV 678
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
+ S +T + +L+ AL+G+E++N++ +++T GS+ + ++VNAC+S+D +N+VGVC
Sbjct: 679 HEESQETAENLLFNALRGEEDKNVEMKLRTFGSEQPKKAVFVVVNACSSKDYTNNIVGVC 738
Query: 726 FVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWK 785
FV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF SDE C EWN AM LTGW
Sbjct: 739 FVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFVSDENTCCSEWNTAMENLTGWS 798
Query: 786 REEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYA 845
R E+I K+L+ E FG+ CCRLK +A IVL+ A+ GQD +K PF F RNGKY
Sbjct: 799 RGEIIGKMLVGETFGS---CCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFSDRNGKYV 855
Query: 846 ECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRN 905
+ LL NK+++ EG + G FCF+Q+AS ELQQAL VQR ++ ++K LAY ++I++
Sbjct: 856 QALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQDKKCYSQMKELAYLCQEIKS 915
Query: 906 PLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFT 965
PL+GI F+ ++E T+L +QK+ L TS C+RQ+ KI+ D DL++I DG L L+ EF
Sbjct: 916 PLNGIRFTNSLLEATDLTEDQKQYLETSTACERQMSKIIRDVDLENIEDGSLTLDKEEFF 975
Query: 966 LNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
L V+ A +SQVM+ + ++++ + E+I + T++GD +R+QQVLADFL + + P+
Sbjct: 976 LGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMVRYAPS 1035
Query: 1026 -GGQLMVSSSLTKDQLGQSVHLAYLELR 1052
G + + Q+ V + ++E R
Sbjct: 1036 PDGWVEIQLQPNMKQISDEVTVVHIEFR 1063
>gi|224108734|ref|XP_002314949.1| phytochrome B2 [Populus trichocarpa]
gi|10954093|gb|AAG25726.1|AF309807_1 phytochrome B2 [Populus trichocarpa]
gi|222863989|gb|EEF01120.1| phytochrome B2 [Populus trichocarpa]
Length = 1146
Score = 1168 bits (3022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 570/1059 (53%), Positives = 758/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR ++ +
Sbjct: 17 AQSSGTSNMRQHHHATESVSKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVRTTNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+QQ TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EQQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V+V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VRVIQDEALMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTETQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QDIT QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDITGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ EG + G FCFLQ+AS ELQQ L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQQTLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E +
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFK 1061
>gi|464387|sp|P29130.2|PHYB_TOBAC RecName: Full=Phytochrome B
gi|295346|gb|AAA34092.1| type II phytochrome [Nicotiana tabacum]
Length = 1132
Score = 1165 bits (3013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/1053 (53%), Positives = 758/1053 (71%), Gaps = 19/1053 (1%)
Query: 7 AQSS--SNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQP 61
AQSS SN ++ IAQ T DA+LHA FE SG SFDYS S++ ++ Q
Sbjct: 20 AQSSGTSNVNYKDSISKAIAQYTADARLHAVFEQSGESGKSFDYSQSIKTTT-----QSV 74
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
++ TAYL IQ+G IQPFGC++A+DE +F+VIAYSENA E+L++ +VPS+
Sbjct: 75 VPEQQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEMLSLTPQSVPSLERPE 134
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
+L +G+D++T+FT S+ L++A G E++LLNPI +H K SGKPFYAI+HRV ++ID
Sbjct: 135 ILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVID 194
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EP + + ++ AGA+QS KLA +AI+ LQSLP G ++ LCDT+++ V ELTGYDRVM
Sbjct: 195 LEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKLLCDTVVESVRELTGYDRVMV 254
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEVV+E LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V+
Sbjct: 255 YKFHEDEHGEVVAESKIPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVV 314
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRL 361
QDE L L L GSTLRAPH CH QYM NM SIASL +AV++N +EE + RL
Sbjct: 315 QDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGG--RSSMRL 372
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGLVV H+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++LRTQTLLCDML+
Sbjct: 373 WGLVVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLL 432
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RD+P GIV QSP+IMDLVKCDGAAL + K + LGVTP + Q+ DIV WL YH DSTGL
Sbjct: 433 RDSPTGIVIQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGL 492
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
S DSL DAGY GA LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDDG
Sbjct: 493 STDSLADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDG 552
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLC 601
++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSL LILR++FKD + +H++L
Sbjct: 553 QRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSL-LILRDSFKDAEASN-SKAVVHAQLG 610
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
+++++G+ EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELT LSV++A+GK
Sbjct: 611 EMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTDLSVEEAMGKSL 670
Query: 662 L-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ LV S +T +++L+ AL+G+E++N++ +++T G + + ++VNAC+S+D +N
Sbjct: 671 VHDLVHKESQETAEKLLFNALRGEEDKNVEIKLRTFGPEQLKKAVFVVVNACSSKDYTNN 730
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVK 780
+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF SDE C EWN AM K
Sbjct: 731 IVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEK 790
Query: 781 LTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFAR 840
LTGW R E+I K+L+ E+FG+ CCRLK +A IVL+ A+ QD +K PF FF R
Sbjct: 791 LTGWSRGEIIGKMLVGEIFGS---CCRLKGPDAMTKFMIVLHNAIGVQDTDKFPFSFFDR 847
Query: 841 NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK 900
NGKY + LL NK+++ EG + G FCF+Q+AS ELQQAL VQR E+ ++K LAY
Sbjct: 848 NGKYVQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYLC 907
Query: 901 RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLE 960
++I++PL+GI F+ ++E T+L QK+ L TSA C+RQ+ KI+ D DL++I DG L LE
Sbjct: 908 QEIKSPLNGIRFTNSLLEATDLTENQKQYLETSAACERQMSKIIRDVDLENIEDGSLTLE 967
Query: 961 MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI 1020
EF L V+ A +SQVM+ + ++++ + E+I + T++GD +R+QQVLADFL +
Sbjct: 968 KEEFFLGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMV 1027
Query: 1021 NFVPN-GGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+ P+ G + + Q+ V + ++E R
Sbjct: 1028 RYAPSPDGWVEIQLQPNMKQISDEVTVVHIEFR 1060
>gi|293335473|ref|NP_001169810.1| uncharacterized protein LOC100383702 [Zea mays]
gi|37926866|gb|AAP06788.1| phytochrome B1 apoprotein [Zea mays]
Length = 1161
Score = 1163 bits (3009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1020 (54%), Positives = 742/1020 (72%), Gaps = 24/1020 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDYS S+R T P S++ AYL IQ+
Sbjct: 51 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPT------PSSEQQIAAYLSRIQR 104
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH--PVLGIGSDIKTI 132
G IQPFGC LA+ D+ +F+++A+SEN+P+LL + +H+VPS+ P + +G+D + +
Sbjct: 105 GGHIQPFGCTLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPHVSLGADARLL 164
Query: 133 FTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPM 192
F+ SA L++A E+SLLNPI +H + S KPFYAI+HR+ ++ID EP + + +
Sbjct: 165 FSPSSAVLLERAFAAREISLLNPIWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPAL 224
Query: 193 TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEV 252
+ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEV
Sbjct: 225 SIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEV 284
Query: 253 VSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTL 312
V+E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L L
Sbjct: 285 VAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGLSQPLCL 344
Query: 313 CGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLPQKRKRLWGLVVCHN 369
GSTLRAPH CH QYM NM SIASLVMAV+++ D+E+ G + K LWGLVVCH+
Sbjct: 345 VGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMK-LWGLVVCHH 403
Query: 370 TTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIV 429
T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GIV
Sbjct: 404 TSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIV 463
Query: 430 TQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDA 489
TQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ +H DSTGLS DSL DA
Sbjct: 464 TQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHGDSTGLSTDSLADA 523
Query: 490 GYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSS 549
GYLGA ALG+ VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRSS
Sbjct: 524 GYLGAAALGEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 583
Query: 550 FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKIE 606
FKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L++
Sbjct: 584 FKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAIVNGQVQLRELELR 643
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LV 665
G+ EL +V EMVRLIETATVPI AVD DG +NGWN KIAELTGLSV++A+GK + L+
Sbjct: 644 GINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLI 703
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
S TV+++L AL+G+E++N++ ++KT GS+ + PI ++VNAC+SRD N+VGVC
Sbjct: 704 FKESEATVEKLLSRALRGEEDKNVEIKLKTFGSEQSKGPIFVVVNACSSRDYTQNIVGVC 763
Query: 726 FVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWK 785
FV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTGW
Sbjct: 764 FVGQDVTGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWS 823
Query: 786 REEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYA 845
R EV+ K L+ EVFG CCRLK +A ++++ A+ GQD EK PF FF +NGKY
Sbjct: 824 RGEVVGKFLIGEVFGN---CCRLKGPDALTKFMVIIHNAIGGQDYEKFPFSFFDKNGKYV 880
Query: 846 ECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRN 905
+ LL N + +G G FCFLQ+AS E+QQA +QR E+ R+K LAY ++I+N
Sbjct: 881 QALLTANTRSKMDGKSIGAFCFLQIASTEIQQAFEIQRQQEKKCYARMKELAYICQEIKN 940
Query: 906 PLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFT 965
PLSGI F+ +++ T+L +Q++ L TS+ C++Q+ KI+ D+ L SI DG L LE EF+
Sbjct: 941 PLSGIRFTNSLLQMTDLNDDQRQFLETSSACEKQMSKIVKDASLQSIEDGSLVLEQSEFS 1000
Query: 966 LNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
L +V+ A +SQ M+ + ++++ + ++I + YGD R+QQVLADFL + P+
Sbjct: 1001 LGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQCRIQQVLADFLLSMVRSAPS 1060
>gi|414866482|tpg|DAA45039.1| TPA: phytochromeB1 [Zea mays]
Length = 1161
Score = 1163 bits (3008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1020 (54%), Positives = 741/1020 (72%), Gaps = 24/1020 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDYS S+R T P S++ AYL IQ+
Sbjct: 51 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPT------PSSEQQIAAYLSRIQR 104
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH--PVLGIGSDIKTI 132
G IQPFGC LA+ D+ +F+++A+SEN+P+LL + +H+VPS+ P + +G+D + +
Sbjct: 105 GGHIQPFGCTLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPHVSLGADARLL 164
Query: 133 FTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPM 192
F+ SA L++A E+SLLNPI +H + S KPFYAI+HR+ ++ID EP + + +
Sbjct: 165 FSPSSAVLLERAFAAREISLLNPIWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPAL 224
Query: 193 TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEV 252
+ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEV
Sbjct: 225 SIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEV 284
Query: 253 VSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTL 312
V+E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L L
Sbjct: 285 VAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGLSQPLCL 344
Query: 313 CGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLPQKRKRLWGLVVCHN 369
GSTLRAPH CH QYM NM SIASLVMAV+++ D+E+ G + K LWGLVVCH+
Sbjct: 345 VGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMK-LWGLVVCHH 403
Query: 370 TTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIV 429
T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GIV
Sbjct: 404 TSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIV 463
Query: 430 TQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDA 489
TQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ +H DSTGLS DSL DA
Sbjct: 464 TQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHGDSTGLSTDSLADA 523
Query: 490 GYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSS 549
GYLGA ALG+ VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRSS
Sbjct: 524 GYLGAAALGEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 583
Query: 550 FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKIE 606
FKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L++
Sbjct: 584 FKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAIVNGQVQLRELELR 643
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LV 665
G+ EL +V EMVRLIETATVPI AVD DG +NGWN KIAELTGLSV++A+GK + L+
Sbjct: 644 GINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLI 703
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
S TV+++L AL+G+E++N++ ++KT GS+ PI ++VNAC+SRD N+VGVC
Sbjct: 704 FKESEATVEKLLSRALRGEEDKNVEIKLKTFGSEQYKGPIFVVVNACSSRDYTQNIVGVC 763
Query: 726 FVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWK 785
FV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTGW
Sbjct: 764 FVGQDVTGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWS 823
Query: 786 REEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYA 845
R EV+ K L+ EVFG CCRLK +A ++++ A+ GQD EK PF FF +NGKY
Sbjct: 824 RGEVVGKFLIGEVFGN---CCRLKGPDALTKFMVIIHNAIGGQDYEKFPFSFFDKNGKYV 880
Query: 846 ECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRN 905
+ LL N + +G G FCFLQ+AS E+QQA +QR E+ R+K LAY ++I+N
Sbjct: 881 QALLTANTRSKMDGKSIGAFCFLQIASTEIQQAFEIQRQQEKKCYARMKELAYICQEIKN 940
Query: 906 PLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFT 965
PLSGI F+ +++ T+L +Q++ L TS+ C++Q+ KI+ D+ L SI DG L LE EF+
Sbjct: 941 PLSGIRFTNSLLQMTDLNDDQRQFLETSSACEKQMSKIVKDASLQSIEDGSLVLEQSEFS 1000
Query: 966 LNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
L +V+ A +SQ M+ + ++++ + ++I + YGD R+QQVLADFL + P+
Sbjct: 1001 LGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQCRIQQVLADFLLSMVRSAPS 1060
>gi|78643884|emb|CAJ21305.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1160 bits (3000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1059 (53%), Positives = 755/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGN---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|312231795|gb|ACE79199.2| phytochrome B-2 [Glycine max]
Length = 1149
Score = 1160 bits (3000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/1013 (54%), Positives = 739/1013 (72%), Gaps = 18/1013 (1%)
Query: 19 SARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQ 75
+++ IAQ T DA+LHA FE SG S FDYS S+RV+S + +QQ TAYL IQ
Sbjct: 50 TSKAIAQYTEDARLHAVFEQSGESGRSFDYSQSIRVTSESVPEQQ------ITAYLLKIQ 103
Query: 76 KGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH--PVLGIGSDIKTIF 133
+G IQPFG ++A+DE +F+++AYS+NA ++L + +VPS+ D +G+DI+T+F
Sbjct: 104 RGGFIQPFGSMIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLF 163
Query: 134 TAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMT 193
T SA L+KA E+SL+NPI +H +TSGKPFY I+HR+ ++ID EP + + ++
Sbjct: 164 THSSAVLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALS 223
Query: 194 AAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVV 253
AGA+QS KLA +AI++LQSLP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEVV
Sbjct: 224 IAGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVV 283
Query: 254 SEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLC 313
+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V+QDE L L L
Sbjct: 284 AETKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLV 343
Query: 314 GSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPR 373
GSTLRAPH CH QYM NM S ASLVMAV++N +EEG + RLWGLV+CH+T+ R
Sbjct: 344 GSTLRAPHGCHAQYMANMGSTASLVMAVIINGNDEEGVGG--RTSMRLWGLVICHHTSAR 401
Query: 374 FVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSP 433
+PFPLRYACEFL Q F + +N EL+L Q LEK +LRTQTLLCDML+RD+P GIVTQSP
Sbjct: 402 CIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSP 461
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
+IMDLVKCDGAAL Y+ + LGVTP + Q+ DI+ WL +H DSTGLS DSL DAGY G
Sbjct: 462 SIMDLVKCDGAALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPG 521
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A +LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDDG++MHPRSSFKAF
Sbjct: 522 AASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 581
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK+RSLPW++ EMDAIHSLQLILR++FKD + + ++ +L+++G+ EL +
Sbjct: 582 LEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEHSN-SKAVLDPRMSELELQGVDELSS 640
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDT 672
V EMVRLIETAT PI AVDVDG +NGWN K++ELTGL V++A+GK + LV S +T
Sbjct: 641 VAREMVRLIETATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEET 700
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
V ++L AL+G+E++N++ +++T G + + + ++VNAC+S+D +NVVGVCFV QD+T
Sbjct: 701 VDKLLSRALKGEEDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVT 760
Query: 733 PQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDK 792
QK VMDKF I+GDYKAIV NPNPLIPPIF SD+ C EWN AM KLTGW R +VI K
Sbjct: 761 GQKIVMDKFINIQGDYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGK 820
Query: 793 LLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVN 852
+L+ EVFG+ CC+LK ++ IVL+ A+ G D ++ PF F R GK+ + L N
Sbjct: 821 MLVGEVFGS---CCQLKGSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTAN 877
Query: 853 KKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K+++ +G + G FCFLQ+ S ELQQAL QR E+ + R+K LAY + ++NPLSGI F
Sbjct: 878 KRVNMDGQIIGAFCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRF 937
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVA 972
+ ++E T L EQK+ L TSA C++Q+ KI+ D D++SI DG L+LE EF L V+ A
Sbjct: 938 TNSLLEATCLSNEQKQFLETSAACEKQMLKIIHDVDIESIEDGSLELEKGEFLLGNVINA 997
Query: 973 SISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+SQVM+ + ++++ + E+I + +YGD +R+QQVL+DFL + + P+
Sbjct: 998 VVSQVMLLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPS 1050
>gi|78643900|emb|CAJ21313.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1160 bits (3000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1059 (53%), Positives = 756/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|356555997|ref|XP_003546314.1| PREDICTED: phytochrome B-like isoform 1 [Glycine max]
Length = 1149
Score = 1160 bits (3000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/1013 (54%), Positives = 739/1013 (72%), Gaps = 18/1013 (1%)
Query: 19 SARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQ 75
+++ IAQ T DA+LHA FE SG S FDYS S+RV+S + +QQ TAYL IQ
Sbjct: 50 TSKAIAQYTEDARLHAVFEQSGESGRSFDYSQSIRVTSESVPEQQ------ITAYLLKIQ 103
Query: 76 KGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH--PVLGIGSDIKTIF 133
+G IQPFG ++A+DE +F+++AYS+NA ++L + +VPS+ D +G+DI+T+F
Sbjct: 104 RGGFIQPFGSMIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLF 163
Query: 134 TAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMT 193
T SA L+KA E+SL+NPI +H +TSGKPFY I+HR+ ++ID EP + + ++
Sbjct: 164 THSSAVLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALS 223
Query: 194 AAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVV 253
AGA+QS KLA +AI++LQSLP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEVV
Sbjct: 224 IAGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVV 283
Query: 254 SEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLC 313
+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V+QDE L L L
Sbjct: 284 AETKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLV 343
Query: 314 GSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPR 373
GSTLRAPH CH QYM NM S ASLVMAV++N +EEG + RLWGLVVCH+T+ R
Sbjct: 344 GSTLRAPHGCHAQYMANMGSTASLVMAVIINGNDEEGVGG--RTSMRLWGLVVCHHTSAR 401
Query: 374 FVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSP 433
+PFPLRYACEFL Q F + +N EL+L Q LEK +LRTQTLLCDML+RD+P GIVTQSP
Sbjct: 402 CIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSP 461
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
+IMDLVKCDGAAL Y+ + LGVTP + Q+ DI+ WL +H DSTGLS DSL DAGY G
Sbjct: 462 SIMDLVKCDGAALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPG 521
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A +LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDDG++MHPRSSFKAF
Sbjct: 522 AASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 581
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK+RSLPW++ EMDAIHSLQLILR++FKD + + ++ +L+++G+ EL +
Sbjct: 582 LEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEHSN-SKAVLDPRMSELELQGVDELSS 640
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDT 672
V EMVRLIETAT PI AVDVDG +NGWN K++ELTGL V++A+GK + LV S +T
Sbjct: 641 VAREMVRLIETATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEET 700
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
V ++L AL+G+E++N++ +++T G + + + ++VNAC+S+D +NVVGVCFV QD+T
Sbjct: 701 VDKLLSRALKGEEDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVT 760
Query: 733 PQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDK 792
QK VMDKF I+GDYKAIV NPNPLIPPIF SD+ C EWN AM KLTGW R +VI K
Sbjct: 761 GQKIVMDKFINIQGDYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGK 820
Query: 793 LLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVN 852
+L+ EVFG+ CC+LK ++ IVL+ A+ G D ++ PF F R GK+ + L N
Sbjct: 821 MLVGEVFGS---CCQLKGSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTAN 877
Query: 853 KKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K+++ +G + G FCFLQ+ S ELQQAL QR E+ + R+K LAY + ++NPLSGI F
Sbjct: 878 KRVNMDGQIIGAFCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRF 937
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVA 972
+ ++E T L EQK+ L TSA C++Q+ KI+ D D++SI DG L+LE EF L V+ A
Sbjct: 938 TNSLLEATCLSNEQKQFLETSAACEKQMLKIIHDVDIESIEDGSLELEKGEFLLGNVINA 997
Query: 973 SISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+SQVM+ + ++++ + E+I + +YGD +R+QQVL+DFL + + P+
Sbjct: 998 VVSQVMLLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPS 1050
>gi|78643918|emb|CAJ21322.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1159 bits (2999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1059 (53%), Positives = 756/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643898|emb|CAJ21312.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1159 bits (2998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1059 (53%), Positives = 756/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643908|emb|CAJ21317.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1158 bits (2996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1059 (53%), Positives = 755/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKHNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643912|emb|CAJ21319.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1158 bits (2996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1059 (53%), Positives = 756/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643892|emb|CAJ21309.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1158 bits (2996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1059 (53%), Positives = 756/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDSALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643902|emb|CAJ21314.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1158 bits (2996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1059 (53%), Positives = 756/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASLELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643946|emb|CAJ21336.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1158 bits (2996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/1067 (53%), Positives = 760/1067 (71%), Gaps = 31/1067 (2%)
Query: 3 SSRPA----QSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSV 49
S++PA QSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SV
Sbjct: 9 SNQPAHNQVQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSV 68
Query: 50 RVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTM 109
R + + ++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L +
Sbjct: 69 RTPNQSVPEEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGL 122
Query: 110 VNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYA 169
+VPS+ +L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYA
Sbjct: 123 TPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYA 182
Query: 170 IVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQE 229
I+HR+ ++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++
Sbjct: 183 ILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDS 242
Query: 230 VFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRM 289
V ELTGYDRVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA RFLF +N+VRM
Sbjct: 243 VRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQAPRFLFKQNRVRM 302
Query: 290 IVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEE 347
IVDC A V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE
Sbjct: 303 IVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEE 362
Query: 348 EEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEK 407
G + RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK
Sbjct: 363 AIGG----RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEK 418
Query: 408 NILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDI 467
++LRTQTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DI
Sbjct: 419 HVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDI 478
Query: 468 VSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVR 527
V WL H D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+
Sbjct: 479 VEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVK 538
Query: 528 WGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVG 587
WGGAKH P++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D
Sbjct: 539 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAE 598
Query: 588 TLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAE 647
+ +H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AE
Sbjct: 599 ATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 648 LTGLSVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPIT 706
LTGLSV++A+GK + LV + V ++++ A++G+E++N++ +++T S+ +
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 707 LIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSD 766
++VNAC+S+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 767 EFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMS 826
E C EWN A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIG 834
Query: 827 GQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSE 886
G D +K+PF FF RN K + LL NK+++ +G + G FCFLQ+AS ELQQ+L VQ+ E
Sbjct: 835 GIDTDKLPFSFFDRNEKNVQTLLTANKRVNIKGDIIGPFCFLQIASPELQQSLKVQKQQE 894
Query: 887 QTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDD 946
+ + R+K LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D
Sbjct: 895 KKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRD 954
Query: 947 SDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSI 1006
DL+SI +G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD
Sbjct: 955 IDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQA 1014
Query: 1007 RLQQVLADFLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
R+QQVLADFL + + P + G + + T Q+ L + E R
Sbjct: 1015 RIQQVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643906|emb|CAJ21316.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1158 bits (2995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1059 (53%), Positives = 756/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643894|emb|CAJ21310.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1158 bits (2995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1059 (53%), Positives = 756/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643886|emb|CAJ21306.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1158 bits (2995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1059 (53%), Positives = 756/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIKGDIIGPFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643878|emb|CAJ21302.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1157 bits (2993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1059 (53%), Positives = 755/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CC+LK + I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCKLKGPNSLTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643916|emb|CAJ21321.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1157 bits (2993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1059 (53%), Positives = 756/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643888|emb|CAJ21307.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1059 (53%), Positives = 755/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSLP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC+ A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMSAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIGLHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASLELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|108711122|gb|ABF98917.1| Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
Length = 957
Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/925 (59%), Positives = 712/925 (76%), Gaps = 14/925 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++R S S++ +S+HSARV+AQT +DA+LHA+FE S FDYS+SV ++ +G
Sbjct: 6 SNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVGAANRSGA---- 61
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+ +AYL ++Q+G+ +QPFGCLLA+ +TF ++AYSENA E+L + HAVP++
Sbjct: 62 -TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQRE 120
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L +G+D++T+F + S ALQKA FG+V+LLNPILVH +TSGKPFYAI+HR+ L+ID
Sbjct: 121 ALAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVID 180
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P ++P+TA GA++SYKLAA+AI RLQSLPSG++ LCD +++EV ELTGYDRVMA
Sbjct: 181 LEPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 240
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++
Sbjct: 241 YKFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKII 300
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQK 357
QD+ L +++CGSTLRAPH CH QYM +M S+ASLVM+V +N++E++ +T P+
Sbjct: 301 QDDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKG 360
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK LWGL+VCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLC
Sbjct: 361 RK-LWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLC 419
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GI TQSPN+MDLVKCDGAAL Y+N++W LG TP++ ++ +IV+WL EYH
Sbjct: 420 DMLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDG 479
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-D 536
STGLS DSL +AGY GA ALGDVVCGMAA++IS KD IFWFRS TA E++WGGAKHEP D
Sbjct: 480 STGLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPID 539
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDV-GTLDLDTKS 595
D+GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D + + KS
Sbjct: 540 ADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKS 599
Query: 596 IHSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
I + D KI+G+ EL VT+EMVRLIETAT PILAVD+ G +NGWN K AELTGL V
Sbjct: 600 IVTAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPV 659
Query: 654 DKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
+AIGK + LV D S++ VK++L ALQG EEQN+Q ++KT + N+ P+ L+VNAC
Sbjct: 660 MEAIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACC 719
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
SRDL + VVGVCFVAQD+T Q +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C E
Sbjct: 720 SRDLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLE 779
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM K+TG KRE+ +DKLL+ EVF + CR+K+ L I++N +SGQDPEK+
Sbjct: 780 WNEAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKL 839
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
FGFF +GKY E L+ K+ D EG +TG CFL +AS ELQ AL VQ++SEQ A+
Sbjct: 840 LFGFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSF 899
Query: 894 KALAYTKRQIRNPLSGIIFSRKMME 918
K L Y ++++RNPL+G++ M++
Sbjct: 900 KELTYIRQELRNPLNGMLELEAMLQ 924
>gi|78643890|emb|CAJ21308.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1156 bits (2991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1067 (53%), Positives = 760/1067 (71%), Gaps = 31/1067 (2%)
Query: 3 SSRPA----QSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSV 49
S++PA QSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SV
Sbjct: 9 SNQPAHNQVQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSV 68
Query: 50 RVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTM 109
R + + ++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L +
Sbjct: 69 RTPNQSVPEEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGL 122
Query: 110 VNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYA 169
+VPS+ +L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYA
Sbjct: 123 TPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYA 182
Query: 170 IVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQE 229
I+HR+ ++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++
Sbjct: 183 ILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDS 242
Query: 230 VFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRM 289
V ELTGYDRVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRM
Sbjct: 243 VRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRM 302
Query: 290 IVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEE 347
IVDC A V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE
Sbjct: 303 IVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEE 362
Query: 348 EEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEK 407
G + RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK
Sbjct: 363 AIGG----RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEK 418
Query: 408 NILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDI 467
++LRTQTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DI
Sbjct: 419 HVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDI 478
Query: 468 VSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVR 527
V WL H D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+
Sbjct: 479 VEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVK 538
Query: 528 WGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVG 587
WGGAKH P++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D
Sbjct: 539 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAE 598
Query: 588 TLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAE 647
+ +H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AE
Sbjct: 599 ATN-SKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 648 LTGLSVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPIT 706
LTGLSV++A+GK + LV + V ++++ A++G+E++N++ +++T S+ +
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 707 LIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSD 766
++VNAC+S+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 767 EFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMS 826
E C EWN A+ KLTGW R EV+ K+L+ EVFG+ CC+LK +A I L+ A+
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGS---CCKLKGPDALTKFMIALHNAIG 834
Query: 827 GQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSE 886
G D +K+PF FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E
Sbjct: 835 GIDTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQE 894
Query: 887 QTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDD 946
+ + R+K LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D
Sbjct: 895 KKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRD 954
Query: 947 SDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSI 1006
DL+SI +G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD
Sbjct: 955 IDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQA 1014
Query: 1007 RLQQVLADFLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
R+QQVLADFL + + P + G + + T Q+ L + E R
Sbjct: 1015 RIQQVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|388458322|gb|AFK31027.1| phytochrome b, partial [Oryza officinalis]
Length = 1171
Score = 1156 bits (2991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ TAYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------ITAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDGHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWEDAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T Q+ VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQRVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458304|gb|AFK31018.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1156 bits (2991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAIQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458316|gb|AFK31024.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 1156 bits (2991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QDIT QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDITGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQISKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643932|emb|CAJ21329.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1156 bits (2990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1059 (53%), Positives = 754/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKHNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH YMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFERNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|388458374|gb|AFK31053.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1156 bits (2990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1021 (54%), Positives = 735/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCLEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458236|gb|AFK30984.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458286|gb|AFK31009.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458310|gb|AFK31021.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1021 (54%), Positives = 735/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643896|emb|CAJ21311.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1059 (53%), Positives = 754/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS A EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHPAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTGLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|388458216|gb|AFK30974.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458218|gb|AFK30975.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458220|gb|AFK30976.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458260|gb|AFK30996.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458268|gb|AFK31000.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458330|gb|AFK31031.1| phytochrome b, partial [Oryza rufipogon]
gi|388458368|gb|AFK31050.1| phytochrome b, partial [Oryza rufipogon]
gi|388458370|gb|AFK31051.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458230|gb|AFK30981.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458288|gb|AFK31010.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458292|gb|AFK31012.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458294|gb|AFK31013.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458296|gb|AFK31014.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458300|gb|AFK31016.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458306|gb|AFK31019.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458364|gb|AFK31048.1| phytochrome b, partial [Oryza rufipogon]
gi|388458372|gb|AFK31052.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458362|gb|AFK31047.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFE---TSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG SFDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSDASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643856|emb|CAJ21291.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1059 (53%), Positives = 756/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F++IAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRLIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|388458210|gb|AFK30971.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVTESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEAQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|357112543|ref|XP_003558068.1| PREDICTED: phytochrome B-like [Brachypodium distachyon]
Length = 1181
Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1022 (54%), Positives = 735/1022 (71%), Gaps = 26/1022 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA LHA FE SG S FDYS S+ + +QQ AYL IQ+
Sbjct: 69 SKAVAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPSTSSEQQ------IAAYLSRIQR 122
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++A+SENA +LL + +H+VPS+ P + +G+D +
Sbjct: 123 GGHIQPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADSRL 182
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F+ PS L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 183 LFSPPSGVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 242
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM YKFH+D+HGE
Sbjct: 243 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGE 302
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
V++E ++ LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD +P L
Sbjct: 303 VLAESRRTDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPAMPQPLC 362
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN----DEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV+++ DE G +P K LWGLVVC
Sbjct: 363 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMGRGAIPSAMK-LWGLVVC 421
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L YQ+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 422 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAYQLSEKHILRTQTLLCDMLLRDSPTG 481
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 482 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTVCHGDSTGLSTDSLA 541
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 542 DAGYSGATALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 601
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 602 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAREGTSNSKAIVDGQVQLGELE 661
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGL+V++A+GK +T
Sbjct: 662 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLTVEEAMGKSLVTD 721
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S + V+++L AL+G+E++N++ ++KT G + + I +IVNAC+SRD N+VG
Sbjct: 722 LIFKESEEIVEKLLSQALRGEEDKNVEIKLKTFGPEQSKGAIFVIVNACSSRDYTKNIVG 781
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QDIT QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 782 VCFVGQDITGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMEKLTG 841
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EVI KLL+ EVFG CCRLK +A I L+ A+ GQD EK+PF FF +NGK
Sbjct: 842 WSRGEVIGKLLVGEVFGN---CCRLKGPDALTKFMIALHNAIGGQDSEKLPFSFFDKNGK 898
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 899 YVQALLTANTRSKMDGEAIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEI 958
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPLSGI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L I DG L LE E
Sbjct: 959 KNPLSGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQRIEDGSLVLEKGE 1018
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM+ + ++++ + ++I + YGD R+QQVL+DFL + F
Sbjct: 1019 FSLGNVMNAVVSQVMILLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLSDFLLSMVRFA 1078
Query: 1024 PN 1025
P
Sbjct: 1079 PT 1080
>gi|78643910|emb|CAJ21318.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1059 (53%), Positives = 755/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH YMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|388458318|gb|AFK31025.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRRIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643914|emb|CAJ21320.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1059 (53%), Positives = 754/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGN---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCF ++AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFFRIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E +
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFK 1061
>gi|78643934|emb|CAJ21330.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1155 bits (2987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1059 (53%), Positives = 754/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQAPRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS E Q +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIKGDIIGPFCFLQIASPEFQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643880|emb|CAJ21303.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1155 bits (2987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1067 (53%), Positives = 760/1067 (71%), Gaps = 31/1067 (2%)
Query: 3 SSRPA----QSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSV 49
S++PA QSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SV
Sbjct: 9 SNQPAHNQVQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSV 68
Query: 50 RVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTM 109
R + + ++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L +
Sbjct: 69 RTPNQSVPEEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGL 122
Query: 110 VNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYA 169
+VPS+ +L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYA
Sbjct: 123 TPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYA 182
Query: 170 IVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQE 229
I+HR+ ++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++
Sbjct: 183 ILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDS 242
Query: 230 VFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRM 289
V ELTGYDRVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRM
Sbjct: 243 VRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRM 302
Query: 290 IVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEE 347
IVDC A V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE
Sbjct: 303 IVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEE 362
Query: 348 EEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEK 407
G + RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK
Sbjct: 363 AIGG----RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEK 418
Query: 408 NILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDI 467
++LRTQTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DI
Sbjct: 419 HVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDI 478
Query: 468 VSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVR 527
V WL H D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+
Sbjct: 479 VEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVK 538
Query: 528 WGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVG 587
WGGAKH P++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D
Sbjct: 539 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAE 598
Query: 588 TLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAE 647
+ +H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AE
Sbjct: 599 ATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 648 LTGLSVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPIT 706
LTGLSV++A+GK + LV + V ++++ A++G+E++N++ +++T S+ +
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 707 LIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSD 766
++VNAC+S+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 767 EFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMS 826
E C EWN AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIG 834
Query: 827 GQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSE 886
G D +K+PF FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E
Sbjct: 835 GIDTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQE 894
Query: 887 QTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDD 946
+ + R+K LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D
Sbjct: 895 KKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRD 954
Query: 947 SDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSI 1006
DL+SI +G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD
Sbjct: 955 IDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQA 1014
Query: 1007 RLQQVLADFLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
R+QQVLADFL +++ + G + + T Q+ L + E R
Sbjct: 1015 RIQQVLADFLLNMVSYTQSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|388458272|gb|AFK31002.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1155 bits (2987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAARETSLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643858|emb|CAJ21292.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1155 bits (2987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1059 (53%), Positives = 755/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKDSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH YMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPAGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|388458334|gb|AFK31033.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1155 bits (2987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTRSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHFVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYFGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643904|emb|CAJ21315.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1154 bits (2986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1059 (53%), Positives = 755/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N E +L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMEFQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R +V+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGQVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|258677127|gb|ACV87354.1| phytochrome B [Aquilegia formosa]
Length = 1132
Score = 1154 bits (2986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1037 (53%), Positives = 743/1037 (71%), Gaps = 16/1037 (1%)
Query: 21 RVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKG 77
+ IAQ T+DA+LHA FE SG S FDYS S+R +++ Q ++ TAYL IQ+G
Sbjct: 35 KAIAQFTVDARLHAVFEQSGESGKPFDYSQSIRSTTS-----QSIPEQQITAYLSRIQRG 89
Query: 78 KLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPS 137
IQPFGC++++DE +F+VIA+SENA E+L + +VP++ +L +G+D++T+FT S
Sbjct: 90 GHIQPFGCMISVDESSFRVIAFSENATEMLDLTPQSVPTLDKPQLLDVGTDVRTLFTQSS 149
Query: 138 ASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197
L+KA E++LLNP+ +H K SGKPFYAI+H++ ++ID EP + + ++ AGA
Sbjct: 150 VGLLEKAFSAREITLLNPVWIHSKNSGKPFYAILHKIDVGIVIDLEPARTEDPALSIAGA 209
Query: 198 LQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEIT 257
+QS K+A +AI+RLQSLP G + LCDT+++ V +LTGYDRVM YKFH+D+HGEVV+E
Sbjct: 210 VQSQKIAVRAISRLQSLPGGDINILCDTVVENVRDLTGYDRVMVYKFHDDEHGEVVAESK 269
Query: 258 KSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTL 317
+S LEP++GLHYPATDIPQA+RFLF +N+VRMIVDC A V V+QDE L L L GSTL
Sbjct: 270 RSDLEPFIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVHVIQDEALMQPLCLVGSTL 329
Query: 318 RAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPF 377
RAPH CH QYM NM SIASL +AVV+N +EEG T + +LWGLVVCH+T+ R +PF
Sbjct: 330 RAPHGCHAQYMANMGSIASLALAVVINGNDEEG--TSGRNPMKLWGLVVCHHTSARCIPF 387
Query: 378 PLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMD 437
PLR+ACEFL Q F + +N EL+L Q+ EK++LRTQTLLCDML+RD+P GIVTQSP+IMD
Sbjct: 388 PLRHACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMD 447
Query: 438 LVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALAL 497
LVKCDG+AL YK K + +GVTP + Q+ DIV WL YH DSTG+S DSL DAGY GA +L
Sbjct: 448 LVKCDGSALYYKGKFYPIGVTPTEAQMKDIVDWLWAYHGDSTGVSTDSLADAGYPGAASL 507
Query: 498 GDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVV 557
GD V GMA I+ +D +FWFRS TA E++WGGAKH P++KDDG +MHPRSSFKAFLEVV
Sbjct: 508 GDAVRGMAVAYITSRDFLFWFRSNTAKEIKWGGAKHHPEDKDDGHRMHPRSSFKAFLEVV 567
Query: 558 KTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSE 617
K+RSLPW++ EMDAIHSLQLILR++F+D + I S DL+++G+ EL +V E
Sbjct: 568 KSRSLPWENAEMDAIHSLQLILRDSFRDAEGSN-SKPLITSPPGDLELQGVDELSSVARE 626
Query: 618 MVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL-TLVEDSSIDTVKRM 676
MVRLIETAT PI AVD DG +NGWN KIAELTGLSV +A+GK + LV S++ V +
Sbjct: 627 MVRLIETATAPIFAVDSDGRINGWNAKIAELTGLSVGEAMGKSLVHDLVFKESVEVVDNL 686
Query: 677 LYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKT 736
L A +GQE++N++ +++ + ++ I ++VNA +SRD +N+VGVCFV QD+T QK
Sbjct: 687 LKHAFRGQEDKNVEIKLRKFIPRKPEEAIFVVVNARSSRDYTNNIVGVCFVGQDVTSQKV 746
Query: 737 VMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLA 796
VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTGW R E++ K+L+
Sbjct: 747 VMDKFIHIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWDRGEIMGKMLVG 806
Query: 797 EVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLD 856
EVFG CCRLK ++ IVL+ A+ GQD +K PF FF R+GKY + LL NK+ +
Sbjct: 807 EVFG---GCCRLKGPDSLTKFMIVLHSAIGGQDTDKFPFAFFNRDGKYVQALLTANKRAN 863
Query: 857 REGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKM 916
EG + G FCFLQ+AS ELQ AL +QR E+ R+K LAY ++I+NPLSGI F+ +
Sbjct: 864 LEGQIIGAFCFLQIASPELQHALEIQRQQEKKCFARVKELAYICQEIKNPLSGIRFTNTL 923
Query: 917 MEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQ 976
+E T+L +QK+ L TSA C+RQ+ KI+ D DL +I DG L+LE +F L V+ A +SQ
Sbjct: 924 LEATDLTEDQKQFLETSAACERQMMKIIKDVDLQNIEDGSLELERCDFLLGSVINAVVSQ 983
Query: 977 VMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVP-NGGQLMVSSSL 1035
VM+ +G++++ + E+I + + D +R+QQVLADFL + + P G + +
Sbjct: 984 VMILLRERGLQLIRDIPEEIKTLAVSSDQVRIQQVLADFLLNMVRYAPMPDGWVEIQVRP 1043
Query: 1036 TKDQLGQSVHLAYLELR 1052
Q + L +LE R
Sbjct: 1044 NLKQSSDGIELVHLEFR 1060
>gi|388458234|gb|AFK30983.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1154 bits (2985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYGFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRRIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458276|gb|AFK31004.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1154 bits (2985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458212|gb|AFK30972.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1154 bits (2985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRTQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458346|gb|AFK31039.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1154 bits (2985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVTQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPILVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458298|gb|AFK31015.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1154 bits (2984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 735/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G++ +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGANARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCLEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643930|emb|CAJ21328.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1154 bits (2984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1059 (53%), Positives = 755/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AVGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLT 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|388458290|gb|AFK31011.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1154 bits (2984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 735/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++I+ EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVINLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458324|gb|AFK31028.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1154 bits (2984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQ +RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQTSRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|190586167|gb|ACE79200.1| phytochrome B-3 [Glycine max]
Length = 1100
Score = 1154 bits (2984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1013 (54%), Positives = 740/1013 (73%), Gaps = 20/1013 (1%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ IAQ T DA+LHA FE SG S F+YS S+R++S + +QQ TAYL IQ+
Sbjct: 2 SKAIAQYTEDARLHAVFEQSGESGRSFNYSESIRIASESVPEQQ------ITAYLVKIQR 55
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH--PVLGIGSDIKTIFT 134
G IQPFG ++A+DE +F+++ YS+NA ++L + +VPS+ D +G+D++ +FT
Sbjct: 56 GGFIQPFGSMIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGTDVRALFT 115
Query: 135 APSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTA 194
SA L+KA E+SL+NPI +H +TSGKPFY I+HR+ ++ID EP + + ++
Sbjct: 116 HSSALLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSI 175
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
AGA+QS KLA +AI++LQSLP G ++ LCDT+++ V ELTGYDRVM YKFHED+HGEVVS
Sbjct: 176 AGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVS 235
Query: 255 EITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCG 314
E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V+QDE L L L G
Sbjct: 236 ESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVG 295
Query: 315 STLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRF 374
STLRAPH CH QYM NM SIASLVMAV++N +EEG + RLWGLVVCH+T+ R
Sbjct: 296 STLRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGVGG--RSSMRLWGLVVCHHTSARC 353
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPN 434
+PFPLRYACEFL Q F + +N EL+L Q LEK +LRTQTLLCDML+RD+P GIVTQSP+
Sbjct: 354 IPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPS 413
Query: 435 IMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGA 494
IMDLVKCDGAAL ++ + LGVTP + Q+ DI+ WL +H DSTGLS DSL DAGY GA
Sbjct: 414 IMDLVKCDGAALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLGDAGYPGA 473
Query: 495 LALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFL 554
+LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDDG++MHPRSSFKAFL
Sbjct: 474 ASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 533
Query: 555 EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI-HSKLCDLKIEGMKELEA 613
EVVK+RSLPW++ EMDAIHSLQLILR++FKD ++K++ ++ + +++G+ EL +
Sbjct: 534 EVVKSRSLPWENAEMDAIHSLQLILRDSFKDAE--HRNSKAVADPRVSEQELQGVDELSS 591
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL-TLVEDSSIDT 672
V EMVRLIETAT PI AVDVDG VNGWN K++ELTGL V++A+GK + LV S +T
Sbjct: 592 VAREMVRLIETATAPIFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDLVFKESEET 651
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
+ ++L AL+G+E++N++ +++T G + + + L+VNAC+S+D +NVVGVCFV QD+T
Sbjct: 652 MNKLLSRALKGEEDKNVEIKMRTFGPERQNKAVFLVVNACSSKDFTNNVVGVCFVGQDVT 711
Query: 733 PQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDK 792
QK VMDKF I+GDYKAIV +PNPLIPPIF SD+ C EWN AM KLTGW R +VI K
Sbjct: 712 GQKIVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLTGWGRVDVIGK 771
Query: 793 LLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVN 852
+L+ EVFG+ CC+LK ++ IVL+ A+ GQD +K PF F R+GKY + L N
Sbjct: 772 MLVGEVFGS---CCQLKGSDSITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTAN 828
Query: 853 KKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K+++ EG + G FCFLQ+ S ELQQAL QR E+ + R+K LAY + ++NPLSGI F
Sbjct: 829 KRVNMEGQIIGAFCFLQIMSPELQQALKAQRQQEKNSFGRMKELAYICQGVKNPLSGIRF 888
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVA 972
+ ++E T L EQK+ L TS C++Q+ KI+ D DL+SI DG L+LE EF L V+ A
Sbjct: 889 TNSLLEATSLTNEQKQFLETSVACEKQMLKIIRDVDLESIEDGSLELEKGEFLLGNVINA 948
Query: 973 SISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+SQVM+ + ++++ + E+I + +YGD +R+QQVL+DFL + + P+
Sbjct: 949 VVSQVMLLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPS 1001
>gi|388458302|gb|AFK31017.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +T ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETENKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643874|emb|CAJ21300.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1059 (53%), Positives = 754/1059 (71%), Gaps = 29/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMN--IIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 901 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 961 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1020
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1021 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643938|emb|CAJ21332.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1059 (53%), Positives = 755/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLT 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|158513196|sp|A2XFW2.2|PHYB_ORYSI RecName: Full=Phytochrome B
Length = 1171
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458238|gb|AFK30985.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458308|gb|AFK31020.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458376|gb|AFK31054.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +T ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETENKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458248|gb|AFK30990.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458250|gb|AFK30991.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643876|emb|CAJ21301.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1059 (53%), Positives = 754/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW + EV+ K+L+ EVFG CC+LK A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSKGEVVGKMLVGEVFGN---CCKLKGPNALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKPEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|388458320|gb|AFK31026.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+P+ CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPYGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458224|gb|AFK30978.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ D EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVNDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSLKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|122247122|sp|Q10MG9.1|PHYB_ORYSJ RecName: Full=Phytochrome B
gi|30578178|dbj|BAC76432.1| phytochrome B [Oryza sativa Japonica Group]
gi|57506674|dbj|BAD86669.1| phytochrome B [Oryza sativa Japonica Group]
gi|108707763|gb|ABF95558.1| Phytochrome B, putative, expressed [Oryza sativa Japonica Group]
gi|388458242|gb|AFK30987.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458278|gb|AFK31005.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458280|gb|AFK31006.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458284|gb|AFK31008.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|340007755|gb|AEK26584.1| phytochrome B1 [Populus tremula]
Length = 1128
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1062 (53%), Positives = 749/1062 (70%), Gaps = 29/1062 (2%)
Query: 4 SRPAQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSST 54
++ AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR +S
Sbjct: 16 NQAAQSSGTSNMRQHHHATESVSKAIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQ 75
Query: 55 AGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAV 114
+ ++Q TAYL IQ+G IQPFGC++A+DE +F+VIAYSENA E+L +V
Sbjct: 76 SVPEEQ------ITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGFTPQSV 129
Query: 115 PSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRV 174
PS+ +L G+D++T+F S++ L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 130 PSLDKQEILSDGTDVRTLFRPSSSAMLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRI 189
Query: 175 TGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELT 234
++ID EP + + ++ AGA+QS KLA ++I++LQSLP G ++ LCDT+++ V ELT
Sbjct: 190 DVGIVIDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESVRELT 249
Query: 235 GYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 294
GYDRVM YKFHED+HGEVV+E ++ LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC
Sbjct: 250 GYDRVMVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCH 309
Query: 295 ARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE---GD 351
A V+V+QDE L L L GSTLRAPH CH QYM NM SIAS+ MAV++N EEE G
Sbjct: 310 ATPVRVIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASMAMAVIINGNEEEAIGGR 369
Query: 352 NTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILR 411
N+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++LR
Sbjct: 370 NS-----TRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLR 424
Query: 412 TQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWL 471
TQTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + GVTP + Q+ DIV WL
Sbjct: 425 TQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPSGVTPTEAQIKDIVEWL 484
Query: 472 SEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
H DSTGLS DSL DAGY GA +LG+ VCGMA I+ +D +FWFRS TA E++WGGA
Sbjct: 485 LALHGDSTGLSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGA 544
Query: 532 KHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDL 591
KH P++KDDG++MHPRSSFKAFLEVVK+RSL W++ EMDAIHSLQLILR++F+D +
Sbjct: 545 KHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDAEATN- 603
Query: 592 DTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGL 651
+ ++L D +++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGL
Sbjct: 604 SKAVVRTQLEDTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGL 663
Query: 652 SVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVN 710
SV++A+GK + LV +TV ++L+ AL+ +++T S+ + ++VN
Sbjct: 664 SVERAMGKSLVHDLVYKEYEETVDKLLHRALRXXXXXXXXIKLRTFDSEHQKKALFVVVN 723
Query: 711 ACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGW 770
AC+S+D +N+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNPLIPPIF SDE
Sbjct: 724 ACSSKDYMNNIVGVCFVGQDVTGQKVVMDKYVHIQGDYKAIVHSPNPLIPPIFASDENTC 783
Query: 771 CCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDP 830
C EWN AM K TGW R EVI K+L+ EVFG+ C+LK +A I L+ A+ GQD
Sbjct: 784 CLEWNTAMEKFTGWSRGEVIGKMLVGEVFGS---FCQLKGSDALTKFMIALHNAIGGQDT 840
Query: 831 EKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTAL 890
+K+PF FF RNGKY + LL NK+++ EG + G FCFLQ+AS+ELQQAL VQR E+
Sbjct: 841 DKLPFSFFDRNGKYVQALLTANKRVNMEGEIIGAFCFLQIASNELQQALKVQRQQEKKCS 900
Query: 891 KRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLD 950
R+K LAY ++IRNPLSG+ F+ ++E T+L +QK+ L TSA C++Q+ KI D DL
Sbjct: 901 ARMKELAYICQEIRNPLSGLRFTNSLLENTDLTEDQKQFLETSAACEKQILKITRDVDLX 960
Query: 951 SIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQ 1010
L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQ
Sbjct: 961 XXXXXLLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLVVYGDQARIQQ 1020
Query: 1011 VLADFLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLEL 1051
VLADFL + + P + G + + T Q+ L ++E
Sbjct: 1021 VLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHMEF 1062
>gi|78643920|emb|CAJ21323.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1059 (53%), Positives = 755/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+ GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|388458270|gb|AFK31001.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 735/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN ++L + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADMLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P + LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAME-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNIELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458282|gb|AFK31007.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 735/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAIK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|358248221|ref|NP_001240097.1| phytochrome B-like [Glycine max]
gi|312231793|gb|ACE79198.2| phytochrome B-1 [Glycine max]
Length = 1137
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/1012 (54%), Positives = 736/1012 (72%), Gaps = 18/1012 (1%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ IAQ T DA+LHA FE SG S F+YS S+R++S + +QQ TAYL IQ+
Sbjct: 39 SKAIAQYTEDARLHAVFEQSGESGRSFNYSESIRIASESVPEQQ------ITAYLVKIQR 92
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH--PVLGIGSDIKTIFT 134
G IQPFG ++A+DE +F+++ YS+NA ++L + +VPS+ D +G+D++ +FT
Sbjct: 93 GGFIQPFGSMIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGTDVRALFT 152
Query: 135 APSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTA 194
SA L+KA E+SL+NPI +H +TSGKPFY I+HR+ ++ID EP + + ++
Sbjct: 153 HSSALLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSI 212
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
AGA+QS KLA +AI++LQSLP G ++ LCDT+++ V ELTGYDRVM YKFHED+HGEVVS
Sbjct: 213 AGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVS 272
Query: 255 EITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCG 314
E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V+QDE L L L G
Sbjct: 273 ESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVG 332
Query: 315 STLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRF 374
STLRAPH CH QYM NM SIASLVMAV++N +EEG + RLWGLVVCH+T+ R
Sbjct: 333 STLRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGVGG--RSSMRLWGLVVCHHTSARC 390
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPN 434
+PFPLRYACEFL Q F + +N EL+L Q LEK +LRTQTLLCDML+RD+P GIVTQSP+
Sbjct: 391 IPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPS 450
Query: 435 IMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGA 494
IMDLVKCDGAAL ++ + LGVTP + Q+ DI+ WL +H DSTGLS DSL DAGY GA
Sbjct: 451 IMDLVKCDGAALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLGDAGYPGA 510
Query: 495 LALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFL 554
+LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDDG++MHPRSSFKAFL
Sbjct: 511 ASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFL 570
Query: 555 EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAV 614
EVVK+RSLPW++ EMDAIHSLQLILR++FKD + + + + +++G+ EL +V
Sbjct: 571 EVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEHRN-SKAVVDPHVSEQELQGVDELSSV 629
Query: 615 TSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL-TLVEDSSIDTV 673
EMVRLIETAT PI AVDVDG VNGWN K++ELTGL V++A+GK + LV S +T+
Sbjct: 630 AREMVRLIETATAPIFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDLVFKESEETM 689
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
++L AL+G+E++N++ +++T G + + + L+VNAC+S+D +NVVGVCFV QD+T
Sbjct: 690 NKLLSRALKGEEDKNVEIKMRTFGPEHQNKAVFLVVNACSSKDFTNNVVGVCFVGQDVTG 749
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
QK VMDKF I+GDYKAIV +PNPLIPPIF SD+ C EWN AM KLTGW R +VI K+
Sbjct: 750 QKIVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLTGWGRVDVIGKM 809
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
L+ EVFG+ CC+LK ++ IVL+ A+ GQD +K PF F R+GKY + L NK
Sbjct: 810 LVGEVFGS---CCQLKGSDSITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANK 866
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
+++ EG + G FCFLQ+ S ELQQAL QR E+ + R+K LAY + ++NPLSGI F+
Sbjct: 867 RVNMEGQIIGAFCFLQIMSPELQQALKAQRQQEKNSFGRMKELAYICQGVKNPLSGIRFT 926
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVAS 973
++E T L EQK+ L TS C++Q+ KI+ D DL+SI DG L+LE EF L V+ A
Sbjct: 927 NSLLEATSLTNEQKQFLETSVACEKQMLKIIRDVDLESIEDGSLELEKGEFLLGNVINAV 986
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+SQVM+ + ++++ + E+I + +YGD +R+QQVL+DFL + + P+
Sbjct: 987 VSQVMLLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPS 1038
>gi|388458258|gb|AFK30995.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1152 bits (2981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1020 (54%), Positives = 733/1020 (71%), Gaps = 24/1020 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQK---RKRLWGLVVCH 368
L GSTLR+PH CH QYM NM SIASLVMAV+++ ++ N +LWGLVVCH
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSILSAMKLWGLVVCH 412
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GI
Sbjct: 413 HTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGI 472
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL D
Sbjct: 473 VTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLAD 532
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
AGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRS
Sbjct: 533 AGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 592
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKI 605
SFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L++
Sbjct: 593 SFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELEL 652
Query: 606 EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-L 664
G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK + L
Sbjct: 653 RGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDL 712
Query: 665 VEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGV 724
+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VGV
Sbjct: 713 IFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGV 772
Query: 725 CFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGW 784
CFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTGW
Sbjct: 773 CFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGW 832
Query: 785 KREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKY 844
R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGKY
Sbjct: 833 SRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKY 889
Query: 845 AECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIR 904
+ LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I+
Sbjct: 890 VQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIK 949
Query: 905 NPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEF 964
NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE EF
Sbjct: 950 NPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEF 1009
Query: 965 TLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVP 1024
+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F P
Sbjct: 1010 SLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAP 1069
>gi|388458350|gb|AFK31041.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1152 bits (2981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 735/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM +M SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMADMGSIASLVMAVIISSGGDDDHNIARGSVPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLPRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458232|gb|AFK30982.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1152 bits (2981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDVSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458228|gb|AFK30980.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1152 bits (2981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RF F +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFPFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458262|gb|AFK30997.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1152 bits (2980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPASLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|222624796|gb|EEE58928.1| hypothetical protein OsJ_10581 [Oryza sativa Japonica Group]
Length = 1128
Score = 1152 bits (2980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 735/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 16 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 69
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 70 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 129
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 130 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 189
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 190 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGE 249
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 250 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 309
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 310 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 368
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 369 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 428
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 429 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 488
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 489 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 548
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 549 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 608
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 609 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 668
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 669 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 728
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 729 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 788
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 789 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 845
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 846 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 905
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 906 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 965
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 966 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1025
Query: 1024 P 1024
P
Sbjct: 1026 P 1026
>gi|78643922|emb|CAJ21324.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1152 bits (2980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1059 (53%), Positives = 755/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLT 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643870|emb|CAJ21298.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1152 bits (2980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1059 (53%), Positives = 754/1059 (71%), Gaps = 29/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIN--IIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 901 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 961 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1020
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1021 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|388458356|gb|AFK31044.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1152 bits (2980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N E L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMECSLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|39777271|gb|AAR30905.1| phytochrome B [Sorghum bicolor]
gi|39777273|gb|AAR30906.1| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 1152 bits (2979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1020 (54%), Positives = 739/1020 (72%), Gaps = 24/1020 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDYS S+R T P S++ AYL IQ+
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPT------PSSEQQIAAYLSRIQR 121
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH--PVLGIGSDIKTI 132
G IQPFGC LA+ D+ +F+++A+SENA +LL + +H+VPS+ P + +G+D + +
Sbjct: 122 GGHIQPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLL 181
Query: 133 FTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPM 192
F+ SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + + +
Sbjct: 182 FSPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPAL 241
Query: 193 TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEV 252
+ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEV
Sbjct: 242 SIAGAVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEV 301
Query: 253 VSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTL 312
V+E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD + L L
Sbjct: 302 VAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCL 361
Query: 313 CGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLPQKRKRLWGLVVCHN 369
GSTLRAPH CH QYM NM SIASLVMAV+++ D+E+ G + K LWGLVVCH+
Sbjct: 362 VGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMK-LWGLVVCHH 420
Query: 370 TTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIV 429
T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GIV
Sbjct: 421 TSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIV 480
Query: 430 TQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDA 489
TQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL DA
Sbjct: 481 TQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADA 540
Query: 490 GYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSS 549
GYLGA ALGD VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRSS
Sbjct: 541 GYLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 600
Query: 550 FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKIE 606
FKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I ++L +L++
Sbjct: 601 FKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQAQLGELELR 660
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LV 665
G+ EL +V EMVRLIETATVPI AVD DG +NGWN KIAELTGLSV++A+GK + L+
Sbjct: 661 GINELSSVPREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLI 720
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
S + V+++L AL+G+E++N++ ++KT GS+ ++ I +IVNAC+SRD N+VGVC
Sbjct: 721 FKESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVC 780
Query: 726 FVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWK 785
FV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTGW
Sbjct: 781 FVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWS 840
Query: 786 REEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYA 845
R EV+ K L+ EVFG+ CRLK +A +V++ A+ GQD EK PF FF +NGKY
Sbjct: 841 RGEVVGKFLIGEVFGS---FCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYV 897
Query: 846 ECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRN 905
+ LL N + +G G FCFLQ+AS E+QQA +QR E+ R+K LAY ++I+N
Sbjct: 898 QALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKN 957
Query: 906 PLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFT 965
PLSGI F+ +++ T+L +Q++ L T + C++Q+ KI+ D+ L SI DG L LE EF+
Sbjct: 958 PLSGIRFTNSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFS 1017
Query: 966 LNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+V+ A +SQ M+ + ++++ + ++I + YGD R+QQVLADFL + P+
Sbjct: 1018 FGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS 1077
>gi|78643872|emb|CAJ21299.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1152 bits (2979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1059 (53%), Positives = 754/1059 (71%), Gaps = 29/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIN--IIGAFCFLQIASLELQPSLKVQKQQEKKSFARMK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 901 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 961 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1020
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1021 FLLNMVRYAPASAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|388458328|gb|AFK31030.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN ++L + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADVLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KL + EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLPVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458264|gb|AFK30998.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRLPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458244|gb|AFK30988.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RL +LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLHALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458254|gb|AFK30993.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RL +LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLHALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643940|emb|CAJ21333.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/1059 (53%), Positives = 753/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A +E++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAANEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQAPRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH YMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CC+LK + I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCKLKGPNSLTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|388458312|gb|AFK31022.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 735/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +L+ + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCPLAVADDSSFRLLAYSENTADLVDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSADLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN----TLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV+++ ++ N ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458252|gb|AFK30992.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RL +LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLHALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHDCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|39777291|gb|AAR30915.1| phytochrome B [Sorghum bicolor subsp. x drummondii]
Length = 1177
Score = 1151 bits (2977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1020 (54%), Positives = 738/1020 (72%), Gaps = 24/1020 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDYS S+R T P S++ AYL IQ+
Sbjct: 67 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPT------PSSEQQIAAYLSRIQR 120
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH--PVLGIGSDIKTI 132
G IQPFGC LA+ D+ +F+++A+SENA +LL + +H+VPS+ P + +G+D + +
Sbjct: 121 GGHIQPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLL 180
Query: 133 FTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPM 192
F+ SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + + +
Sbjct: 181 FSPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPAL 240
Query: 193 TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEV 252
+ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEV
Sbjct: 241 SIAGAVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEV 300
Query: 253 VSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTL 312
V+E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD + L L
Sbjct: 301 VAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCL 360
Query: 313 CGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLPQKRKRLWGLVVCHN 369
GSTLRAPH CH QYM NM SIASLVMAV+++ D+E+ G + K LWGLVVCH+
Sbjct: 361 VGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMK-LWGLVVCHH 419
Query: 370 TTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIV 429
T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GIV
Sbjct: 420 TSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIV 479
Query: 430 TQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDA 489
TQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL DA
Sbjct: 480 TQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADA 539
Query: 490 GYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSS 549
GYLGA ALGD VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRSS
Sbjct: 540 GYLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 599
Query: 550 FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKIE 606
FKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L++
Sbjct: 600 FKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELR 659
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LV 665
G+ EL +V EMVRLIETATVPI AVD DG +NGWN KIAELTGLSV++A+GK + L+
Sbjct: 660 GINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLI 719
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
S + V+++L AL+G+E++N++ ++KT GS+ ++ I +IVNAC+SRD N+VGVC
Sbjct: 720 FKESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVC 779
Query: 726 FVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWK 785
FV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTGW
Sbjct: 780 FVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWS 839
Query: 786 REEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYA 845
R EV+ K L+ EVFG+ CRLK +A +V++ A+ GQD EK PF FF +NGKY
Sbjct: 840 RGEVVGKFLIGEVFGS---FCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYV 896
Query: 846 ECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRN 905
+ LL N + +G G FCFLQ+AS E+QQA +QR E+ R+K LAY ++I+N
Sbjct: 897 QALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKN 956
Query: 906 PLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFT 965
PLSGI F+ +++ T+L +Q++ L T + C++Q+ KI+ D+ L SI DG L LE EF+
Sbjct: 957 PLSGIRFTNSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFS 1016
Query: 966 LNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+V+ A +SQ M+ + ++++ + ++I + YGD R+QQVLADFL + P+
Sbjct: 1017 FGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS 1076
>gi|242041157|ref|XP_002467973.1| hypothetical protein SORBIDRAFT_01g037340 [Sorghum bicolor]
gi|39777261|gb|AAR30900.1| phytochrome B [Sorghum bicolor]
gi|39777263|gb|AAR30901.1| phytochrome B [Sorghum bicolor]
gi|39777265|gb|AAR30902.1| phytochrome B [Sorghum bicolor]
gi|39777269|gb|AAR30904.1| phytochrome B [Sorghum bicolor]
gi|39777275|gb|AAR30907.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777277|gb|AAR30908.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777279|gb|AAR30909.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777281|gb|AAR30910.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777283|gb|AAR30911.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777285|gb|AAR30912.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777287|gb|AAR30913.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|241921827|gb|EER94971.1| hypothetical protein SORBIDRAFT_01g037340 [Sorghum bicolor]
Length = 1178
Score = 1151 bits (2977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1020 (54%), Positives = 738/1020 (72%), Gaps = 24/1020 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDYS S+R T P S++ AYL IQ+
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPT------PSSEQQIAAYLSRIQR 121
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH--PVLGIGSDIKTI 132
G IQPFGC LA+ D+ +F+++A+SENA +LL + +H+VPS+ P + +G+D + +
Sbjct: 122 GGHIQPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLL 181
Query: 133 FTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPM 192
F+ SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + + +
Sbjct: 182 FSPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPAL 241
Query: 193 TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEV 252
+ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEV
Sbjct: 242 SIAGAVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEV 301
Query: 253 VSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTL 312
V+E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD + L L
Sbjct: 302 VAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCL 361
Query: 313 CGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLPQKRKRLWGLVVCHN 369
GSTLRAPH CH QYM NM SIASLVMAV+++ D+E+ G + K LWGLVVCH+
Sbjct: 362 VGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMK-LWGLVVCHH 420
Query: 370 TTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIV 429
T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GIV
Sbjct: 421 TSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIV 480
Query: 430 TQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDA 489
TQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL DA
Sbjct: 481 TQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADA 540
Query: 490 GYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSS 549
GYLGA ALGD VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRSS
Sbjct: 541 GYLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 600
Query: 550 FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKIE 606
FKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L++
Sbjct: 601 FKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELR 660
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LV 665
G+ EL +V EMVRLIETATVPI AVD DG +NGWN KIAELTGLSV++A+GK + L+
Sbjct: 661 GINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLI 720
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
S + V+++L AL+G+E++N++ ++KT GS+ ++ I +IVNAC+SRD N+VGVC
Sbjct: 721 FKESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVC 780
Query: 726 FVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWK 785
FV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTGW
Sbjct: 781 FVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWS 840
Query: 786 REEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYA 845
R EV+ K L+ EVFG+ CRLK +A +V++ A+ GQD EK PF FF +NGKY
Sbjct: 841 RGEVVGKFLIGEVFGS---FCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYV 897
Query: 846 ECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRN 905
+ LL N + +G G FCFLQ+AS E+QQA +QR E+ R+K LAY ++I+N
Sbjct: 898 QALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKN 957
Query: 906 PLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFT 965
PLSGI F+ +++ T+L +Q++ L T + C++Q+ KI+ D+ L SI DG L LE EF+
Sbjct: 958 PLSGIRFTNSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFS 1017
Query: 966 LNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+V+ A +SQ M+ + ++++ + ++I + YGD R+QQVLADFL + P+
Sbjct: 1018 FGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS 1077
>gi|39777289|gb|AAR30914.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
Length = 1178
Score = 1151 bits (2977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1020 (54%), Positives = 738/1020 (72%), Gaps = 24/1020 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDYS S+R T P S++ AYL IQ+
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPT------PSSEQQIAAYLSRIQR 121
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH--PVLGIGSDIKTI 132
G IQPFGC LA+ D+ +F+++A+SENA +LL + +H+VPS+ P + +G+D + +
Sbjct: 122 GGHIQPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLL 181
Query: 133 FTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPM 192
F+ SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + + +
Sbjct: 182 FSPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPAL 241
Query: 193 TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEV 252
+ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEV
Sbjct: 242 SIAGAVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEV 301
Query: 253 VSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTL 312
V+E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD + L L
Sbjct: 302 VAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCL 361
Query: 313 CGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLPQKRKRLWGLVVCHN 369
GSTLRAPH CH QYM NM SIASLVMAV+++ D+E+ G + K LWGLVVCH+
Sbjct: 362 VGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMK-LWGLVVCHH 420
Query: 370 TTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIV 429
T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GIV
Sbjct: 421 TSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIV 480
Query: 430 TQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDA 489
TQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL DA
Sbjct: 481 TQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADA 540
Query: 490 GYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSS 549
GYLGA ALGD VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRSS
Sbjct: 541 GYLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 600
Query: 550 FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKIE 606
FKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L++
Sbjct: 601 FKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELR 660
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LV 665
G+ EL +V EMVRLIETATVPI AVD DG +NGWN KIAELTGLSV++A+GK + L+
Sbjct: 661 GINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLI 720
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
S + V+++L AL+G+E++N++ ++KT GS+ ++ I +IVNAC+SRD N+VGVC
Sbjct: 721 FKESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVC 780
Query: 726 FVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWK 785
FV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTGW
Sbjct: 781 FVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWS 840
Query: 786 REEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYA 845
R EV+ K L+ EVFG+ CRLK +A +V++ A+ GQD EK PF FF +NGKY
Sbjct: 841 RGEVVGKFLIGEVFGS---FCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYV 897
Query: 846 ECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRN 905
+ LL N + +G G FCFLQ+AS E+QQA +QR E+ R+K LAY ++I+N
Sbjct: 898 QALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKN 957
Query: 906 PLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFT 965
PLSGI F+ +++ T+L +Q++ L T + C++Q+ KI+ D+ L SI DG L LE EF+
Sbjct: 958 PLSGIRFTNSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFS 1017
Query: 966 LNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+V+ A +SQ M+ + ++++ + ++I + YGD R+QQVLADFL + P+
Sbjct: 1018 FGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS 1077
>gi|78643862|emb|CAJ21294.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1151 bits (2977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1059 (53%), Positives = 753/1059 (71%), Gaps = 29/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ GA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSITGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AVGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIN--IIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 901 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 961 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1020
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1021 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|388458274|gb|AFK31003.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1151 bits (2977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 732/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEF Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD P G
Sbjct: 412 HHTSPRCIPFPLRYACEFFMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDTPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ +I+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKNIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643860|emb|CAJ21293.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1151 bits (2977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1059 (53%), Positives = 754/1059 (71%), Gaps = 29/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A +E++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAANEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMN--IIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 901 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 961 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1020
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1021 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|39777267|gb|AAR30903.1| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 1151 bits (2977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1020 (54%), Positives = 738/1020 (72%), Gaps = 24/1020 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDYS S+R T P S++ AYL IQ+
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPT------PSSEQQIAAYLSRIQR 121
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH--PVLGIGSDIKTI 132
G IQPFGC LA+ D+ +F+++A+SENA +LL + +H+VPS+ P + +G+D + +
Sbjct: 122 GGHIQPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLL 181
Query: 133 FTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPM 192
F+ SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + + +
Sbjct: 182 FSPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPAL 241
Query: 193 TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEV 252
+ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEV
Sbjct: 242 SIAGAVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEV 301
Query: 253 VSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTL 312
V+E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD + L L
Sbjct: 302 VAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCL 361
Query: 313 CGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLPQKRKRLWGLVVCHN 369
GSTLRAPH CH QYM NM SIASLVMAV+++ D+E+ G + K LWGLVVCH+
Sbjct: 362 VGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMK-LWGLVVCHH 420
Query: 370 TTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIV 429
T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GIV
Sbjct: 421 TSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIV 480
Query: 430 TQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDA 489
TQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL DA
Sbjct: 481 TQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADA 540
Query: 490 GYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSS 549
GYLGA ALGD VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRSS
Sbjct: 541 GYLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 600
Query: 550 FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKIE 606
FKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L++
Sbjct: 601 FKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELR 660
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LV 665
G+ EL +V EMVRLIETATVPI AVD DG +NGWN KIAELTGLSV++A+GK + L+
Sbjct: 661 GINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLI 720
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
S + V+++L AL+G+E++N++ ++KT GS+ ++ I +IVNAC+SRD N+VGVC
Sbjct: 721 FKESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVC 780
Query: 726 FVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWK 785
FV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTGW
Sbjct: 781 FVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWS 840
Query: 786 REEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYA 845
R EV+ K L+ EVFG+ CRLK +A +V++ A+ GQD EK PF FF +NGKY
Sbjct: 841 RGEVVGKFLIGEVFGS---FCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYV 897
Query: 846 ECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRN 905
+ LL N + +G G FCFLQ+AS E+QQA +QR E+ R+K LAY ++I+N
Sbjct: 898 QALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKN 957
Query: 906 PLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFT 965
PLSGI F+ +++ T+L +Q++ L T + C++Q+ KI+ D+ L SI DG L LE EF+
Sbjct: 958 PLSGIRFTNSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDTTLQSIEDGSLVLEKSEFS 1017
Query: 966 LNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+V+ A +SQ M+ + ++++ + ++I + YGD R+QQVLADFL + P+
Sbjct: 1018 FGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS 1077
>gi|388458366|gb|AFK31049.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1151 bits (2977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 732/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ D EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVTDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FH D+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHGDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRRNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458226|gb|AFK30979.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1150 bits (2976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 732/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHS QLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSSQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRPHEKKCYARMKELAYIFQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLHGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458352|gb|AFK31042.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1150 bits (2976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+ D+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLWDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++ + + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQFIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458336|gb|AFK31034.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1150 bits (2976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ +CDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLICDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESGETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS ++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTASEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643936|emb|CAJ21331.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1150 bits (2975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1067 (53%), Positives = 758/1067 (71%), Gaps = 31/1067 (2%)
Query: 3 SSRPA----QSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSV 49
S++PA QSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SV
Sbjct: 9 SNQPAHNQVQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSV 68
Query: 50 RVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTM 109
R + + ++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L +
Sbjct: 69 RTPNQSVPEEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGL 122
Query: 110 VNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYA 169
+VPS+ +L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYA
Sbjct: 123 TPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYA 182
Query: 170 IVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQE 229
I+HR+ ++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++
Sbjct: 183 ILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDS 242
Query: 230 VFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRM 289
V ELTGYDRVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF N+VRM
Sbjct: 243 VRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKHNRVRM 302
Query: 290 IVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEE 347
IVDC A V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE
Sbjct: 303 IVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEE 362
Query: 348 EEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEK 407
G + RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK
Sbjct: 363 AIGG----RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEK 418
Query: 408 NILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDI 467
++LRTQTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DI
Sbjct: 419 HVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDI 478
Query: 468 VSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVR 527
V WL H D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+
Sbjct: 479 VEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVK 538
Query: 528 WGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVG 587
WGGAKH P++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D
Sbjct: 539 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAE 598
Query: 588 TLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAE 647
+ +H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AE
Sbjct: 599 ATN-SKAVVHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAE 657
Query: 648 LTGLSVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPIT 706
LTGLSV++A+GK + LV + V ++++ A++G+E++N++ +++T S+ +
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 707 LIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSD 766
++VNAC+S+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 767 EFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMS 826
E C EWN A+ KLTGW R EV+ K+L+ EVFG+ CC+LK + I L+ A+
Sbjct: 778 ENTCCLEWNTALEKLTGWSRGEVVGKMLVGEVFGS---CCKLKGPNSLTKFMIALHNAIG 834
Query: 827 GQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSE 886
G D +K+PF FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E
Sbjct: 835 GIDTDKLPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQPSLKVQKQQE 894
Query: 887 QTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDD 946
+ + R+K LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D
Sbjct: 895 KKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRD 954
Query: 947 SDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSI 1006
DL+SI +G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD
Sbjct: 955 IDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQA 1014
Query: 1007 RLQQVLADF-LSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
R+QQVLADF L++ I + G + + T Q+ L + E R
Sbjct: 1015 RIQQVLADFLLNMVIYTQSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643866|emb|CAJ21296.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1150 bits (2975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1059 (53%), Positives = 754/1059 (71%), Gaps = 29/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIN--IIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 901 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 961 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1020
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1021 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|11134029|sp|P93527.2|PHYB_SORBI RecName: Full=Phytochrome B
gi|7110162|gb|AAB41398.2| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 1150 bits (2975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1020 (54%), Positives = 737/1020 (72%), Gaps = 24/1020 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDYS S+R T P S++ AYL IQ+
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPT------PSSEQQIAAYLSRIQR 121
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH--PVLGIGSDIKTI 132
G IQPFGC LA+ D+ +F+++A+SENA +LL + +H+VPS+ P + +G+D + +
Sbjct: 122 GGHIQPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLL 181
Query: 133 FTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPM 192
F+ SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + + +
Sbjct: 182 FSPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPAL 241
Query: 193 TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEV 252
+ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEV
Sbjct: 242 SIAGAVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEV 301
Query: 253 VSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTL 312
V+E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD + L L
Sbjct: 302 VAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCL 361
Query: 313 CGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLPQKRKRLWGLVVCHN 369
GSTLRAPH CH QYM NM SIASLVMAV+++ D+E+ G + K LWGLVVCH+
Sbjct: 362 VGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMK-LWGLVVCHH 420
Query: 370 TTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIV 429
T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GIV
Sbjct: 421 TSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIV 480
Query: 430 TQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDA 489
TQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL DA
Sbjct: 481 TQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADA 540
Query: 490 GYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSS 549
GYLGA ALGD VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRSS
Sbjct: 541 GYLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 600
Query: 550 FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKIE 606
FKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L++
Sbjct: 601 FKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELR 660
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LV 665
G+ EL +V EMVRLIETATVPI AVD DG +NGWN KIAELTGLSV++A+GK + L+
Sbjct: 661 GINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLI 720
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
S + V+++L AL+G+E++N++ ++KT GS+ ++ I +IVNAC+SRD N+VGVC
Sbjct: 721 FKESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVC 780
Query: 726 FVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWK 785
FV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTGW
Sbjct: 781 FVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWS 840
Query: 786 REEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYA 845
R EV+ K L+ EVFG+ CRLK +A +V++ A+ GQD EK PF FF +NGKY
Sbjct: 841 RGEVVGKFLIGEVFGS---FCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYV 897
Query: 846 ECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRN 905
+ LL N + +G G FCFLQ+AS E+QQA +QR E+ R+K LAY ++I+N
Sbjct: 898 QALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKN 957
Query: 906 PLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFT 965
PLSGI F+ +++ T+L +Q++ L T + C+ Q+ KI+ D+ L SI DG L LE EF+
Sbjct: 958 PLSGIRFTNSLLQMTDLNDDQRQFLETCSACEEQMSKIVKDATLQSIEDGSLVLEKSEFS 1017
Query: 966 LNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+V+ A +SQ M+ + ++++ + ++I + YGD R+QQVLADFL + P+
Sbjct: 1018 FGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS 1077
>gi|37779202|gb|AAO86643.1| PHYA2 photoreceptor [Stellaria longipes]
Length = 935
Score = 1150 bits (2975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/685 (79%), Positives = 605/685 (88%), Gaps = 4/685 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
M+S +Q+S+N+G+S+HSAR+IAQT DAKLHA+FE S FDYS+SVR ST+G +Q
Sbjct: 1 MASPAQSQNSTNSGRSKHSARIIAQTIQDAKLHAEFEESSNEFDYSSSVR-GSTSGVNQL 59
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
P+SD+VT++YL IQKGK IQPFGCLLALD+KTF+VIA+SENAPE+LTMV+HAVPSVGD
Sbjct: 60 PKSDKVTSSYLLQIQKGKFIQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVGDL 119
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PV+GIG+DI+TIFT PSASALQKALGF +VSLLNPILVHCK GKPFYAIVHRVT SL+I
Sbjct: 120 PVIGIGTDIRTIFTGPSASALQKALGFTDVSLLNPILVHCKNPGKPFYAIVHRVTRSLVI 179
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSG+M+RL DTM+QEVFELTGYDRVM
Sbjct: 180 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFELTGYDRVM 239
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK L+ YLGLHYPATDIPQAARFLFMKNKVR+I DCRA++V+V
Sbjct: 240 AYKFHDDDHGEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNVRV 299
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP---QK 357
+QDEKL DLTLCGSTLRAPH CH QYMENMNSI SLVMAVVVNDE++E + P K
Sbjct: 300 VQDEKLSVDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQPHK 359
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELE Q LEK ILRTQTLLC
Sbjct: 360 RKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTLLC 419
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIVTQSPNIMDLVKCDGAALLY NK+WRLG+TP D+QL +I WLS HMD
Sbjct: 420 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYNNKVWRLGITPTDYQLQEIGGWLSRDHMD 479
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSLYDAGY AL LGD VCGMAAVRI+ DM+FWFRS TA+E++WGGAKHE E
Sbjct: 480 STGLSTDSLYDAGYPAALELGDSVCGMAAVRITVNDMLFWFRSHTAAEIKWGGAKHEAGE 539
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG KMHPRSSFKAFLEVVK RS+PWKDYEMDAIHSLQLILRNAFKD DL+T IH
Sbjct: 540 KDDGSKMHPRSSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDGEAADLNTSVIH 599
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SK+ DL+I G+KELEAVTSEMVRLIETATVPI AVD DGLVNGWNTKI ELTG+ V++A+
Sbjct: 600 SKISDLQISGLKELEAVTSEMVRLIETATVPIFAVDSDGLVNGWNTKIYELTGIPVEEAV 659
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQ 682
GKH LVEDSSID VK+ML ALQ
Sbjct: 660 GKHIAALVEDSSIDNVKQMLQSALQ 684
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 148/185 (80%)
Query: 868 LQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQK 927
LQLASH+LQ ALH+QRL+EQ A KR LAY KR+I+NPL+GIIFS K+++GT + +Q+
Sbjct: 683 LQLASHDLQHALHIQRLAEQAATKRANVLAYMKRRIKNPLAGIIFSGKILDGTNVDEKQR 742
Query: 928 RLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIR 987
+L TSA+CQ QL+KILDDSDLDSIIDGY +LEMVEF + ++LVASISQVM KS+ KGI+
Sbjct: 743 LVLQTSARCQGQLNKILDDSDLDSIIDGYCELEMVEFAVQDILVASISQVMAKSSEKGIQ 802
Query: 988 IVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLA 1047
+ N E ETLYGDS+RLQQ+LADFLSIS+NF GG + V+ LTKD++G+SV LA
Sbjct: 803 MSNNCTEHGFKETLYGDSLRLQQILADFLSISVNFTSPGGHIGVTVRLTKDKIGESVQLA 862
Query: 1048 YLELR 1052
LE R
Sbjct: 863 NLEFR 867
>gi|121309520|dbj|BAF44083.1| phytochrome b [Lotus japonicus]
Length = 1143
Score = 1150 bits (2975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/1010 (54%), Positives = 741/1010 (73%), Gaps = 16/1010 (1%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLI 80
+ IAQ T DA+LHA +E SG SFDYS+S+RV+ + +QQ TAYL IQ+G I
Sbjct: 45 KAIAQYTEDARLHAVYEQSGESFDYSHSLRVTVESVPEQQ------ITAYLARIQRGGYI 98
Query: 81 QPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPV---LGIGSDIKTIFTAPS 137
QPFGC++A+D+ +F+++AYS+NA ++L + +VPS+ D +G+D++++F+ S
Sbjct: 99 QPFGCMIAVDDPSFRLLAYSDNARDMLGITPQSVPSIDDDSSSSSFALGTDVRSLFSPSS 158
Query: 138 ASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197
A L KA E+SL+NP+ +H +TSG+PFY I+HRV ++ID EP + + ++ AGA
Sbjct: 159 AVLLDKAFAAREISLMNPLWIHSRTSGRPFYGILHRVDVGVVIDLEPARSDDPALSIAGA 218
Query: 198 LQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEIT 257
+QS KLA +AI++LQSLP G ++ LCD ++Q V ELTGYDRVM YKFHED+HGEVV+E
Sbjct: 219 VQSQKLAVRAISQLQSLPGGDVKLLCDAVVQSVRELTGYDRVMVYKFHEDEHGEVVAESK 278
Query: 258 KSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTL 317
++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V V+QDE L L L GSTL
Sbjct: 279 RADLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVGVVQDEALMQPLCLVGSTL 338
Query: 318 RAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPF 377
RAPH CH QYM NM SIASLVMAV++N +++ + RLWGLVVCH+T+ R +PF
Sbjct: 339 RAPHGCHAQYMANMGSIASLVMAVIINGNDDDAVGVGGRSSMRLWGLVVCHHTSARCIPF 398
Query: 378 PLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMD 437
PLRYACEFL Q F + +N EL++ Q LEK +LRTQTLLCDML+RD+P GIVTQSP+IMD
Sbjct: 399 PLRYACEFLMQAFGLQLNMELQMAAQSLEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMD 458
Query: 438 LVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALAL 497
LVKCDGAAL + + LGVTP++ Q+ DI+ WL +H DSTGLS DSL DAGY GA +L
Sbjct: 459 LVKCDGAALYCQGSYYPLGVTPSESQIRDIIDWLLAFHGDSTGLSTDSLADAGYPGASSL 518
Query: 498 GDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVV 557
GD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDDG++MHPRSSFKAFLEVV
Sbjct: 519 GDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV 578
Query: 558 KTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEAVTS 616
K+RS PW + EMDAIHSLQLILR++FK+ D+K+ +++ L +L+++G+ EL +V
Sbjct: 579 KSRSSPWDNAEMDAIHSLQLILRDSFKE--DEHSDSKAVVNTHLAELELQGVDELSSVAR 636
Query: 617 EMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKR 675
EMVRLIETAT PI AVDV+G +NGWN K++ELTGL V++A+GK + LV S +TV R
Sbjct: 637 EMVRLIETATAPIFAVDVEGHINGWNAKVSELTGLPVEEAMGKSLVRDLVYKESEETVDR 696
Query: 676 MLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQK 735
+L AL+G+E++N++ +++T G + D + ++VNAC+S+D +N+VGVCFV QD+T QK
Sbjct: 697 LLSRALKGEEDKNVEIKLRTFGPEHQDKAVYVVVNACSSKDYTNNIVGVCFVGQDVTGQK 756
Query: 736 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLL 795
VMDKF I+GDYKAIV +PNPLIPPIF SD+ C EWN AM KLTGW R +VI KLL+
Sbjct: 757 VVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNAMEKLTGWGRADVIGKLLV 816
Query: 796 AEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKL 855
EVFG+ CC+LK +A IVL+ A+ GQD +K PF F R+GKY + L NK++
Sbjct: 817 GEVFGS---CCQLKGSDAITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRV 873
Query: 856 DREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRK 915
+G + G FCFLQ+ S ELQQAL VQ+ E+ R+K LAY ++++NPLSGI F+
Sbjct: 874 SIDGQIIGAFCFLQIVSPELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTNS 933
Query: 916 MMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASIS 975
++E T L EQK+ L TSA C++Q+ KI+ D DL+SI DG L+LE EF L V+ A +S
Sbjct: 934 LLEATGLTDEQKQFLETSAACEKQMLKIIRDVDLESIEDGSLELERGEFLLGNVINAVVS 993
Query: 976 QVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
QVM+ + ++++ + E+I + +YGD +R+QQVLADFLS + + P+
Sbjct: 994 QVMVLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLSNVVRYAPS 1043
>gi|78643882|emb|CAJ21304.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1150 bits (2975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/1059 (53%), Positives = 753/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSTTCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK A I L+ A+ G D +K+
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPNALTKFMIALHNAIGGIDTDKLT 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASLELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|78643868|emb|CAJ21297.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1150 bits (2974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1059 (53%), Positives = 753/1059 (71%), Gaps = 29/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ + G FCFLQ+ S ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMN--IIGAFCFLQIVSPELQPSLKVQKQQEKKSFARMK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 901 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 961 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1020
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1021 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|388458348|gb|AFK31040.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1150 bits (2974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 732/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLL DML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLRDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMNGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458256|gb|AFK30994.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1150 bits (2974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 735/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PPSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A +SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAARGISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN----TLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV+++ ++ N ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458314|gb|AFK31023.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1150 bits (2974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+ R +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +T ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETENKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458332|gb|AFK31032.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1150 bits (2974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 732/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIP IF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPLIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNVVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458344|gb|AFK31038.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1150 bits (2974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHY ATDIPQA+RFLF +N VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYFATDIPQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|293336623|ref|NP_001168077.1| phytochromeB2 [Zea mays]
gi|37926881|gb|AAP06789.1| phytochrome B2 apoprotein [Zea mays]
gi|413955930|gb|AFW88579.1| phytochromeB2 [Zea mays]
Length = 1166
Score = 1150 bits (2974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/1011 (54%), Positives = 731/1011 (72%), Gaps = 24/1011 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ +DA+LHA FE SG S FDYS S+R T P S++ AYL IQ+
Sbjct: 53 SKAVAQYNLDARLHAVFEQSGASGRSFDYSQSLRAPPT------PSSEQQIAAYLSRIQR 106
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGD--HPVLGIGSDIKTI 132
G IQP GC LA+ D+ +F+++A+SENA +LL + +H+VPS+ P + +G+D +
Sbjct: 107 GGHIQPLGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSVALPPVSLGADARLY 166
Query: 133 FTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPM 192
F+ SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + + +
Sbjct: 167 FSPSSAVLLERAFAAREISLLNPLWIHSRASSKPFYAILHRIDVGVVIDLEPARTEDPAL 226
Query: 193 TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEV 252
+ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM YKFHED+HGEV
Sbjct: 227 SIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHEDEHGEV 286
Query: 253 VSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTL 312
V+E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L L
Sbjct: 287 VAESRRDNLEPYLGLHYPATDIPQASRFLFQQNRVRMIADCHAIPVRVIQDPGLSQQLCL 346
Query: 313 CGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLPQKRKRLWGLVVCHN 369
GSTLRAPH CH QYM NM SIASLVMAV+++ D+E G + K LWGLVVCH+
Sbjct: 347 VGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDERTGRGAISSSMK-LWGLVVCHH 405
Query: 370 TTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIV 429
T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GI+
Sbjct: 406 TSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPAGII 465
Query: 430 TQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDA 489
TQSP++MDLVKCDGAAL Y+ K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL DA
Sbjct: 466 TQSPSVMDLVKCDGAALYYRGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADA 525
Query: 490 GYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSS 549
GYLGA+ALGD VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRSS
Sbjct: 526 GYLGAVALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 585
Query: 550 FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKIE 606
FKAFLEVVK+RSL W++ EMDAIHSLQLILR++F+D ++K+I +L +L++
Sbjct: 586 FKAFLEVVKSRSLSWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQRQLGELELR 645
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LV 665
G+ EL +V EMVRLIETATVPI AVD DG +NGWN KIAELTGLSV++A+GK + L+
Sbjct: 646 GINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLI 705
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
D V+++L AL+G+E++N++ ++KT GS+ + I +IVNAC+SRD N+VGVC
Sbjct: 706 FKECDDIVEKLLSRALRGEEDKNVEIKLKTFGSEQSKGAIFVIVNACSSRDYTQNIVGVC 765
Query: 726 FVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWK 785
FV QD+T QK VMDKF I+GDYKAIV NPNPL+PPIF SDE C EWN AM KLTGW
Sbjct: 766 FVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLLPPIFASDENTSCSEWNTAMEKLTGWS 825
Query: 786 REEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYA 845
REEV+ K L+ EVFG CCRLK +A +V++ A+ G D EK PF FF +NGKY
Sbjct: 826 REEVVGKFLIGEVFGN---CCRLKGPDALTKFMVVIHNAIEGHDSEKFPFSFFDKNGKYV 882
Query: 846 ECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRN 905
+ LL N + +G G FCFLQ+AS E+QQA +QR E+ R+K LAY ++I+N
Sbjct: 883 QALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKN 942
Query: 906 PLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFT 965
PLSGI F+ +++ T+L +Q++ L TS+ C++Q+ KI+ D+ L SI DG L LE EF+
Sbjct: 943 PLSGIRFTNSLLQMTDLNDDQRQFLETSSACEKQMSKIVKDASLKSIEDGSLVLEKSEFS 1002
Query: 966 LNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
L +V+ A +SQ M + ++++ + ++I + YGD R+QQVLADFL
Sbjct: 1003 LGDVMNAVVSQTMSLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFL 1053
>gi|78643864|emb|CAJ21295.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1149 bits (2973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/1067 (53%), Positives = 758/1067 (71%), Gaps = 33/1067 (3%)
Query: 3 SSRPA----QSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSV 49
S++PA QSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SV
Sbjct: 9 SNQPAHNQVQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSV 68
Query: 50 RVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTM 109
R + + ++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L +
Sbjct: 69 RTPNQSVPEEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGL 122
Query: 110 VNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYA 169
+VPS+ +L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYA
Sbjct: 123 TPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYA 182
Query: 170 IVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQE 229
I+HR+ ++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++
Sbjct: 183 ILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDS 242
Query: 230 VFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRM 289
V ELTGYDRVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRM
Sbjct: 243 VRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRM 302
Query: 290 IVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEE 347
IVDC A V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE
Sbjct: 303 IVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEE 362
Query: 348 EEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEK 407
G + RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK
Sbjct: 363 AIGG----RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEK 418
Query: 408 NILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDI 467
++LRTQTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DI
Sbjct: 419 HVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDI 478
Query: 468 VSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVR 527
V WL H D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+
Sbjct: 479 VEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVK 538
Query: 528 WGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVG 587
WGGAKH P++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D
Sbjct: 539 WGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAE 598
Query: 588 TLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAE 647
+ +H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AE
Sbjct: 599 ATN-SKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAE 657
Query: 648 LTGLSVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPIT 706
LTGLSV++A+GK + LV + V ++++ A++G+E++N++ +++T S+ +
Sbjct: 658 LTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVF 717
Query: 707 LIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSD 766
++VNAC+S+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SD
Sbjct: 718 VVVNACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASD 777
Query: 767 EFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMS 826
E C EWN AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+
Sbjct: 778 ENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIG 834
Query: 827 GQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSE 886
G D +K+PF FF RN K + LL NK+++ + G FCFLQ+AS ELQ +L VQ+ E
Sbjct: 835 GIDTDKLPFSFFDRNEKNVQTLLTANKRVNIN--IIGAFCFLQIASPELQPSLKVQKQQE 892
Query: 887 QTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDD 946
+ + R+K LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D
Sbjct: 893 KKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRD 952
Query: 947 SDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSI 1006
DL+SI +G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD
Sbjct: 953 IDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQA 1012
Query: 1007 RLQQVLADFLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
R+QQVLADFL + + P + G + + T Q+ L + E R
Sbjct: 1013 RIQQVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643924|emb|CAJ21325.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1149 bits (2973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/1059 (53%), Positives = 752/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE +F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEHSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH YMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCF Q+AS E Q +L VQ+ E+ + R+K
Sbjct: 843 FSFFERNEKNVQTLLTANKRVNIKGDIIGPFCFFQIASPEFQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|388458354|gb|AFK31043.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1149 bits (2973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 731/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPIPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ + ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVAIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTIVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++K G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKPFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458340|gb|AFK31036.1| phytochrome b, partial [Oryza rufipogon]
gi|388458342|gb|AFK31037.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1149 bits (2973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHY ATDIPQA+RFLF +N VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYFATDIPQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643942|emb|CAJ21334.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1149 bits (2973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/1059 (53%), Positives = 753/1059 (71%), Gaps = 29/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKHNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CC+LK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCKLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNMN--IIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 901 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 961 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1020
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1021 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|388458214|gb|AFK30973.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458222|gb|AFK30977.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1149 bits (2973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 732/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++I EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIGLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ CDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLPCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|62199070|gb|AAX76779.1| putative phytochrome B [Triticum aestivum]
Length = 1166
Score = 1149 bits (2972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1022 (54%), Positives = 735/1022 (71%), Gaps = 26/1022 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA LHA FE SG S FDYS S+ T P S++ AYL IQ+
Sbjct: 54 SKAVAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPT------PSSEQQIAAYLSRIQR 107
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++A+SENA +LL + +H+VPS+ P + +G+D +
Sbjct: 108 GGHIQPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARL 167
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F+ S L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 168 LFSPSSGVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 227
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM YKFH+D+HGE
Sbjct: 228 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGE 287
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
V++E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD +P L
Sbjct: 288 VLAESRRGDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLC 347
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN----TLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV+++ E+ N +P K LWGLVVC
Sbjct: 348 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMK-LWGLVVC 406
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK++LRTQTLLCDML+RD+P G
Sbjct: 407 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHMLRTQTLLCDMLLRDSPTG 466
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 467 IVTQSPSIMDLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLA 526
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 527 DAGYPGATALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 586
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D G ++K+I +L +L+
Sbjct: 587 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELE 646
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD G +NGWN K+AELTGL+V++A+GK +
Sbjct: 647 LRGIDELSSVAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLVKD 706
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S + V+++L AL+G+E N++ ++KT GS+ + PI +IVNAC+SRD ++VG
Sbjct: 707 LIFKESEEIVEKLLSQALKGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKSIVG 766
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QDIT QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 767 VCFVGQDITGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMEKLTG 826
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 827 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDSEKSPFSFFDKNGK 883
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 884 YVQALLTANTRSKMDGETIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEI 943
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 944 KNPLSGIRFTNSLLEMTDLKDDQRQFLETSAACEKQMSKIVKDASLQSIEDGSLVLEKGE 1003
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM+ + ++++ + ++I + YGD R+QQVL+DFL + F
Sbjct: 1004 FSLGNVMNAVVSQVMILLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLSDFLLSMVRFA 1063
Query: 1024 PN 1025
P
Sbjct: 1064 PT 1065
>gi|39777293|gb|AAR30916.1| phytochrome B [Sorghum propinquum]
Length = 1177
Score = 1149 bits (2971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1020 (54%), Positives = 737/1020 (72%), Gaps = 24/1020 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDYS S+R T P S++ AYL IQ+
Sbjct: 67 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPT------PSSEQQIAAYLSRIQR 120
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH--PVLGIGSDIKTI 132
G IQPFGC LA+ D+ +F+++A+SENA +LL + +H+VPS+ P + +G+D + +
Sbjct: 121 GGHIQPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPHVSLGADARLL 180
Query: 133 FTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPM 192
F+ SA L++A E+SLLNP+ +H + S PFYAI+HR+ ++ID EP + + +
Sbjct: 181 FSPSSAVLLERAFAAREISLLNPLWIHSRVSSNPFYAILHRIDVGVVIDLEPARTEDPAL 240
Query: 193 TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEV 252
+ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEV
Sbjct: 241 SIAGAVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEV 300
Query: 253 VSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTL 312
V+E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD + L L
Sbjct: 301 VAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCL 360
Query: 313 CGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLPQKRKRLWGLVVCHN 369
GSTLRAPH CH QYM NM SIASLVMAV+++ D+E+ G + K LWGLVVCH+
Sbjct: 361 VGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMK-LWGLVVCHH 419
Query: 370 TTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIV 429
T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GIV
Sbjct: 420 TSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIV 479
Query: 430 TQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDA 489
TQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL DA
Sbjct: 480 TQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADA 539
Query: 490 GYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSS 549
GYLGA ALGD VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRSS
Sbjct: 540 GYLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 599
Query: 550 FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKIE 606
FKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L++
Sbjct: 600 FKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELR 659
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LV 665
G+ EL +V EMVRLIETATVPI AVD DG +NGWN KIAELTGLSV++A+GK + L+
Sbjct: 660 GINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLI 719
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
S + V+++L AL+G+E++N++ ++KT GS+ ++ I +IVNAC+SRD N+VGVC
Sbjct: 720 FKESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVC 779
Query: 726 FVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWK 785
FV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTGW
Sbjct: 780 FVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWS 839
Query: 786 REEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYA 845
R EV+ K L+ EVFG+ CRLK +A +V++ A+ GQD EK PF FF +NGKY
Sbjct: 840 RGEVVGKFLIGEVFGS---FCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYV 896
Query: 846 ECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRN 905
+ LL N + +G G FCFLQ+AS E+QQA +QR E+ R+K LAY ++I+N
Sbjct: 897 QALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKN 956
Query: 906 PLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFT 965
PLSGI F+ +++ T+L +Q++ L T + C++Q+ KI+ D+ L SI DG L LE EF+
Sbjct: 957 PLSGIRFTNSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDATLQSIEDGSLVLEKSEFS 1016
Query: 966 LNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+V+ A +SQ M+ + ++++ + ++I + YGD R+QQVLADFL + P+
Sbjct: 1017 FGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS 1076
>gi|388458360|gb|AFK31046.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1148 bits (2970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 732/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFE---TSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG SFDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSDASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D + WFRS TA E++WGGAKH P++KDDG++M PR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLSWFRSHTAKEIKWGGAKHHPEDKDDGQRMRPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643928|emb|CAJ21327.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1148 bits (2970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/1059 (53%), Positives = 752/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSTTCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+ GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCF Q+AS E Q +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIKGDIIGPFCFFQIASPEFQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|297600820|ref|NP_001049910.2| Os03g0309200 [Oryza sativa Japonica Group]
gi|255674454|dbj|BAF11824.2| Os03g0309200, partial [Oryza sativa Japonica Group]
Length = 1120
Score = 1148 bits (2970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1024 (54%), Positives = 733/1024 (71%), Gaps = 26/1024 (2%)
Query: 17 RHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHH 73
R R Q T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL
Sbjct: 5 RGKNRTHPQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSR 58
Query: 74 IQKGKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSD 128
IQ+G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D
Sbjct: 59 IQRGGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGAD 118
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+ +F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP +
Sbjct: 119 ARLLFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTE 178
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
+ ++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+
Sbjct: 179 DPALSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDE 238
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L
Sbjct: 239 HGEVVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQ 298
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGL 364
L L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGL
Sbjct: 299 PLCLVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGL 357
Query: 365 VVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA 424
VVCH+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+
Sbjct: 358 VVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDS 417
Query: 425 PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSAD 484
P GIVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS D
Sbjct: 418 PTGIVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTD 477
Query: 485 SLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKM 544
SL DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++M
Sbjct: 478 SLADAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 537
Query: 545 HPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLC 601
HPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L
Sbjct: 538 HPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLG 597
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
+L++ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK
Sbjct: 598 ELELRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSL 657
Query: 662 LT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N
Sbjct: 658 VNDLIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKN 717
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVK 780
+VGVCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM K
Sbjct: 718 IVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEK 777
Query: 781 LTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFAR 840
LTGW R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +
Sbjct: 778 LTGWSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDK 834
Query: 841 NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK 900
NGKY + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY
Sbjct: 835 NGKYVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIY 894
Query: 901 RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLE 960
++I+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE
Sbjct: 895 QEIKNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLE 954
Query: 961 MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI 1020
EF+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL +
Sbjct: 955 KGEFSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMV 1014
Query: 1021 NFVP 1024
F P
Sbjct: 1015 RFAP 1018
>gi|255642594|gb|ACU21557.1| phytochrome B [Medicago sativa]
Length = 1141
Score = 1148 bits (2970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/1033 (53%), Positives = 739/1033 (71%), Gaps = 18/1033 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
+++++ + +N ++ + IAQ DA+LHA FE SG SFDYS S+R+++ + +QQ
Sbjct: 25 ITTTKETEQQNNNVNNKSMKKAIAQYIEDARLHAVFEQSGDSFDYSQSIRLTTASVPEQQ 84
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD- 119
TAYL IQ+G IQPFG ++A+DE +F+V+AYSENA ++L + +VPS+ D
Sbjct: 85 ------ITAYLAKIQRGGFIQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDD 138
Query: 120 ----HPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
IG+D++++FT S L+KA E+SL+NPI +H +++GKPFY I+HR+
Sbjct: 139 DESSSSGFNIGTDVRSLFTHSSGVLLEKAFSAREISLMNPIWIHSRSTGKPFYGILHRID 198
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCD +++ V ELTG
Sbjct: 199 VGVVIDLEPARSEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTG 258
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A
Sbjct: 259 YDRVMVYKFHEDEHGEVVAESKRIDLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCNA 318
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP 355
V+V QDE L + L GSTLRAPH CH QYM NM SIASL MAV++N +E+G
Sbjct: 319 SPVRVFQDEALVQPVCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGG 378
Query: 356 QKRK--RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
R RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q LEK +LRTQ
Sbjct: 379 TGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQ 438
Query: 414 TLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSE 473
TLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + LGVTP + Q+ DI+ WL
Sbjct: 439 TLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALFYQGNYYPLGVTPTESQIRDIIEWLLA 498
Query: 474 YHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKH 533
+H DSTGLS DSL DAGY GA +LGD VCGMA I+ KD +FWFRS TA E++WGGAKH
Sbjct: 499 FHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKH 558
Query: 534 EPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDT 593
P++KDDG++MHPRSSFKAFLEVVK+RS+ W + EMDAIHSLQLILR++FK+ D
Sbjct: 559 HPEDKDDGQRMHPRSSFKAFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENND-SK 617
Query: 594 KSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
+H+ + +L+++G+ EL +V EMVRLIETAT PI AVDV+G +NGWN K++ELTGL V
Sbjct: 618 AVVHTHMAELELQGVDELSSVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLV 677
Query: 654 DKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNAC 712
+ A+GK L LV S +TV ++L AL+G+E++N++ +++T G + + ++VNAC
Sbjct: 678 EDAMGKSLLHDLVYKESQETVDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNAC 737
Query: 713 ASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCC 772
+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PN LIPPIF SD+ C
Sbjct: 738 SSKDYTNNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCL 797
Query: 773 EWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEK 832
EWN AM KL+GW R +VI KLL+ EVFG+ C+LK +A IVL+ A+ GQD +K
Sbjct: 798 EWNNAMEKLSGWSRTDVIGKLLVGEVFGS---FCQLKGSDAMTKFMIVLHNALGGQDTDK 854
Query: 833 VPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKR 892
PF F +GKY + L NK+++ +G + G FCFLQ+ S ELQQAL VQR + + R
Sbjct: 855 FPFSFVDGHGKYVQTFLTANKRVNIDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFAR 914
Query: 893 LKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSI 952
+K LAY ++++NPLSGI F+ ++E T L EQK+LL TSA C++Q+ KI+ D DLDSI
Sbjct: 915 MKELAYICQEVKNPLSGIRFTNSLLESTCLTDEQKQLLETSAACEKQMLKIIRDIDLDSI 974
Query: 953 IDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVL 1012
DG L LE EF L V+ A +SQVM+ + ++++ + E+I + +YGD +R QQVL
Sbjct: 975 DDGSLALEKQEFLLENVINAVVSQVMLLLRERNLQLIRDIPEEIKTLAVYGDQLRFQQVL 1034
Query: 1013 ADFLSISINFVPN 1025
ADFL + + P+
Sbjct: 1035 ADFLMNVVRYAPS 1047
>gi|388458240|gb|AFK30986.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1148 bits (2969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/1021 (54%), Positives = 731/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT++ V EL GYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVGHVRELIGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AV DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVGTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNVVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458246|gb|AFK30989.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1147 bits (2967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/1020 (54%), Positives = 731/1020 (71%), Gaps = 24/1020 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA F SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFGQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HRV ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRVDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAAQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQK---RKRLWGLVVCH 368
L GSTLR+PH CH QYM NM SIASLVMAV+++ ++ N +LWGLVVCH
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSILSAMKLWGLVVCH 412
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GI
Sbjct: 413 HTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGI 472
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL D
Sbjct: 473 VTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLAD 532
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
AGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRS
Sbjct: 533 AGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRS 592
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKI 605
SFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L++
Sbjct: 593 SFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELEL 652
Query: 606 EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-L 664
G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK + L
Sbjct: 653 RGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDL 712
Query: 665 VEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGV 724
+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VGV
Sbjct: 713 IFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGV 772
Query: 725 CFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGW 784
CFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTGW
Sbjct: 773 CFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGW 832
Query: 785 KREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKY 844
R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGKY
Sbjct: 833 SRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKY 889
Query: 845 AECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIR 904
+ LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I+
Sbjct: 890 VQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEIK 949
Query: 905 NPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEF 964
NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE EF
Sbjct: 950 NPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGEF 1009
Query: 965 TLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVP 1024
+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F P
Sbjct: 1010 SLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFAP 1069
>gi|388458358|gb|AFK31045.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1147 bits (2967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+P+ C+ QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPNGCYAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS SL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTVSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458338|gb|AFK31035.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1147 bits (2967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1021 (54%), Positives = 732/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHY ATDIPQA+RFLF +N VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYFATDIPQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + P +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPTFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|388458266|gb|AFK30999.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 1147 bits (2966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/1021 (54%), Positives = 733/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S F Y+ S+R S T P S++ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFYYTQSLRASPT------PSSEQQIAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G++ +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGANARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +T R+L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETENRLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|78643944|emb|CAJ21335.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1146 bits (2965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/1059 (53%), Positives = 752/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SV+ + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVKTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A +E++F+ IAYSENA +L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAANEQSFRGIAYSENAKNMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G D++ F SA L+K G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGGDVRIFFRPSSAVLLEKTFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQQ+L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQQSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 F-LSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
F L++ I + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVIYTQSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|422898335|dbj|BAM67033.1| phytochrome b [Chrysanthemum seticuspe f. boreale]
Length = 1130
Score = 1146 bits (2965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/1044 (53%), Positives = 755/1044 (72%), Gaps = 27/1044 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ IAQ +DA+LHA +E SG SFDYS S++ S+T + +++ TAYL IQ+
Sbjct: 36 SKAIAQYAVDARLHAVYEQSGGSGKSFDYSQSIKTSAT---NDDSIAEQQMTAYLSKIQR 92
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAP 136
G IQPFGC++A+D TFKVIA+SENA E L + +VPS+ +L IG+D+KT+F
Sbjct: 93 GGHIQPFGCMIAIDNVTFKVIAFSENARERLGLAPQSVPSLEKPEILTIGTDVKTLFMNS 152
Query: 137 SASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
S L+ A E++L NP LV K SGKPFYAI+HR+ ++ID EPV+ + ++ AG
Sbjct: 153 SVLKLEHAFRAREITLSNPHLVQSKNSGKPFYAILHRIDVGIVIDLEPVRTEDPGISGAG 212
Query: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEI 256
++QS KLA +AI+++Q+LP G ++ LCDT++Q V ELTGYDRVM YKFHED+HGEVV+E
Sbjct: 213 SVQSQKLAVRAISKVQALPGGDIKLLCDTVVQNVRELTGYDRVMVYKFHEDEHGEVVAES 272
Query: 257 TKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGST 316
++ L+PY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V+QD+ L L L GST
Sbjct: 273 KRADLDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCYANPVRVVQDDALMQPLCLVGST 332
Query: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVP 376
LRAPH CH QYM NM S ASL +AV++N E D + LWGLVVCH+T+ R +P
Sbjct: 333 LRAPHGCHAQYMANMGSRASLALAVIINGNE---DGAGGRGTMGLWGLVVCHHTSARCIP 389
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 436
FPLR+ACEFL Q F + +N EL+L Q+ EK ILRTQTLLCDML+RD+P GIVTQSP+IM
Sbjct: 390 FPLRHACEFLMQAFGLQLNLELQLASQMSEKRILRTQTLLCDMLLRDSPTGIVTQSPSIM 449
Query: 437 DLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALA 496
DLVKCDGAAL Y+ K + +G+TP + Q+ DIV WL H DSTGLS DSL DAGY GA
Sbjct: 450 DLVKCDGAALYYQGKYYPIGITPTESQIKDIVDWLLACHTDSTGLSTDSLADAGYPGAAT 509
Query: 497 LGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEV 556
LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDDG++MHPRSSF AFLEV
Sbjct: 510 LGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNAFLEV 569
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEAVT 615
VK+RSLPW++ EMDAIHSLQLILR++FKD + + ++K+ I ++ ++ ++GM EL +V
Sbjct: 570 VKSRSLPWENSEMDAIHSLQLILRDSFKD--SDESNSKAVIKVQIDEMGLQGMDELSSVA 627
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVK 674
EMVRLIETAT PI AVDV+G +NGWN KIAELTGLSV++A+GK + L+ S +TV
Sbjct: 628 REMVRLIETATAPIFAVDVEGRINGWNAKIAELTGLSVNEAMGKSLVQDLIYKESEETVV 687
Query: 675 RMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQ 734
++L A+QG+E++N++ ++KT DD + ++VNAC+S+D DN+VGVCFV QD+T Q
Sbjct: 688 KLLQNAIQGEEDKNVEIKLKTFNLAQEDDAVFVVVNACSSKDYTDNIVGVCFVGQDVTRQ 747
Query: 735 KTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLL 794
K VMDKF +I+GDYKAI+ +PN LIPPIF SDE C EWN AM KLTGW RE+VI K+L
Sbjct: 748 KVVMDKFVQIQGDYKAIIHSPNALIPPIFASDENTCCSEWNTAMEKLTGWGREDVIGKML 807
Query: 795 LAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKK 854
+ E+FG+ CCRLK ++ I+L+ A+ GQD +K PF FF R GKY + LL NK+
Sbjct: 808 VGEIFGS---CCRLKGPDSLTKFMIILHNAIGGQDTDKYPFSFFDRRGKYVQALLTANKR 864
Query: 855 LDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSR 914
++ G VTG FCF+Q+AS ELQQA +QR E +R+K LAY +I+NPLSGI F+
Sbjct: 865 VNLGGEVTGAFCFVQIASPELQQAFKIQRQQENKCFERMKELAYICHEIKNPLSGIRFAN 924
Query: 915 KMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASI 974
++E T+L +QK+LL TSA CQ+Q+ KI+ D D+++I +G+L+LE +F L V+ A +
Sbjct: 925 SLLEATDLTEDQKQLLETSAACQKQMLKIIKDVDMENIQEGHLELEKHDFLLGNVIDAVV 984
Query: 975 SQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV-----PNGG-Q 1028
SQVM+ +G++++ + E I + T+YGD R+QQVL +FL +N V PNG +
Sbjct: 985 SQVMLILRDRGVQLIRDIPEDIKTLTVYGDQTRVQQVLTNFL---LNMVRHSPSPNGWVE 1041
Query: 1029 LMVSSSLTKDQLGQSVHLAYLELR 1052
+ V S+L Q+ + + +++ R
Sbjct: 1042 IQVRSTLK--QIFDGMTIVHIDFR 1063
>gi|326516988|dbj|BAJ96486.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1168
Score = 1146 bits (2964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1022 (54%), Positives = 732/1022 (71%), Gaps = 26/1022 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA LHA FE SG S FDYS S+ T P S++ AYL IQ+
Sbjct: 56 SKAVAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPT------PSSEQQIAAYLSRIQR 109
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++A+SENA +LL + +H+VPS+ P + +G+D +
Sbjct: 110 GGHIQPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARL 169
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F+ S L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 170 LFSPSSGVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 229
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM YKFH+D+HGE
Sbjct: 230 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGE 289
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
V++E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD +P L
Sbjct: 290 VLAESRRGDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLC 349
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN----TLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV+++ E+ N +P K LWGLVVC
Sbjct: 350 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMK-LWGLVVC 408
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 409 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 468
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 469 IVTQSPSIMDLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLA 528
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 529 DAGYPGATALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 588
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D G ++K+I +L +L+
Sbjct: 589 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELE 648
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD G +NGWN K+AELTGL+V++A+GK +
Sbjct: 649 LRGIDELSSVAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLIKD 708
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S + V+++L AL+G+E N++ ++KT GS+ + PI +IVNAC+SRD N+VG
Sbjct: 709 LIFKESEEIVEKLLSQALRGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKNIVG 768
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QDIT QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM LTG
Sbjct: 769 VCFVGQDITGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMENLTG 828
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A I L+ A+ GQD EK PF FF +NGK
Sbjct: 829 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIALHNAIGGQDSEKSPFSFFDKNGK 885
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 886 YVQALLTANTRSKMDGETIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEI 945
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 946 KNPLSGIRFTNSLLEMTDLKDDQRQFLETSAACEKQMSKIVKDASLQSIEDGSLVLEKGE 1005
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM+ + ++++ + ++I + YGD R+QQVL+ FL + F
Sbjct: 1006 FSLGNVMNAVVSQVMILLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLSHFLLSMVRFA 1065
Query: 1024 PN 1025
P
Sbjct: 1066 PT 1067
>gi|388458326|gb|AFK31029.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 1144 bits (2959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/1021 (54%), Positives = 730/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPQC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FW RS TA E++WGGAKH P++KDDG++MH R
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWIRSHTAKEIKWGGAKHHPEDKDDGQRMHSR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++K G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKPFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|297836762|ref|XP_002886263.1| phytochrome B [Arabidopsis lyrata subsp. lyrata]
gi|297332103|gb|EFH62522.1| phytochrome B [Arabidopsis lyrata subsp. lyrata]
Length = 1163
Score = 1143 bits (2957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1030 (53%), Positives = 744/1030 (72%), Gaps = 19/1030 (1%)
Query: 7 AQSSSNTG-KSRHS-ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQP 61
AQSS + R S ++ I Q T+DA+LHA FE SG SFDYS S++ +T G P
Sbjct: 31 AQSSGTKSLRPRESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGSSVP 88
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 89 --EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTLEKPE 146
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ ++ID
Sbjct: 147 ILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVVID 206
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+++ V +LTGYDRVM
Sbjct: 207 LEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMV 266
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A+ V V+
Sbjct: 267 YKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNAKPVLVV 326
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-R 360
QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G N + R
Sbjct: 327 QDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNVASGRSSMR 386
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLCDML
Sbjct: 387 LWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDML 446
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H DSTG
Sbjct: 447 LRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHADSTG 506
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL DAGY A ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++KDD
Sbjct: 507 LSTDSLGDAGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 566
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
G++MHPR SF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++K++ +
Sbjct: 567 GQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE-SEAAMNSKAVDGAV 625
Query: 601 --C-DLKIE-GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
C D+ E G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAELTGLSV++A
Sbjct: 626 QPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEA 685
Query: 657 IGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
+GK ++ L+ + +TV ++L AL+G EE+N++ ++KT ++ + ++VNAC S+
Sbjct: 686 MGKSLVSDLIYKENEETVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNACFSK 745
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE C EWN
Sbjct: 746 DYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWN 805
Query: 776 PAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPF 835
AM KLTGW R EVI K+L+ EVFG+ CC LK +A IVL+ A+ GQ+ +K PF
Sbjct: 806 MAMEKLTGWSRSEVIGKMLVGEVFGS---CCMLKGPDALTKFMIVLHNAIGGQETDKFPF 862
Query: 836 GFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKA 895
FF RNGK+ + LL NK++ +G V G FCFLQ+ S ELQQAL VQR + + K
Sbjct: 863 PFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKE 922
Query: 896 LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG 955
LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D DL+SI DG
Sbjct: 923 LAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESIEDG 982
Query: 956 YLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADF 1015
+L+M EF L V+ A +SQ M +G++++ + E+I S ++GD IR+QQ+LA+F
Sbjct: 983 SFELKMAEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIVVFGDQIRIQQLLAEF 1042
Query: 1016 LSISINFVPN 1025
L I + P+
Sbjct: 1043 LLSIIRYAPS 1052
>gi|6469491|emb|CAA40795.2| phytochrome B [Oryza sativa Indica Group]
Length = 1171
Score = 1143 bits (2957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1021 (54%), Positives = 730/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S PFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSNPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KL +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLVVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHGQYMANMGSIASLVMAVIISSGGDDDHNIARGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRT TLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTGTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA LGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAADLGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC++RD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSTRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|57791646|gb|AAW56591.1| phytochrome B [Arabidopsis lyrata]
Length = 1160
Score = 1142 bits (2955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1030 (53%), Positives = 744/1030 (72%), Gaps = 19/1030 (1%)
Query: 7 AQSSSNTG-KSRHS-ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQP 61
AQSS + R S ++ I Q T+DA+LHA FE SG SFDYS S++ +T G P
Sbjct: 28 AQSSGTKSLRPRESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGSSVP 85
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 86 --EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTLEKPE 143
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ ++ID
Sbjct: 144 ILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVVID 203
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+++ V +LTGYDRVM
Sbjct: 204 LEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMV 263
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A+ V V+
Sbjct: 264 YKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNAKPVLVV 323
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-R 360
QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G N + R
Sbjct: 324 QDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNVASGRSSMR 383
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLCDML
Sbjct: 384 LWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDML 443
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H DSTG
Sbjct: 444 LRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHADSTG 503
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL DAGY A ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++KDD
Sbjct: 504 LSTDSLGDAGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 563
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
G++MHPR SF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++K++ +
Sbjct: 564 GQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE-SEAAMNSKAVDGAV 622
Query: 601 --C-DLKIE-GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
C D+ E G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAELTGLSV++A
Sbjct: 623 QPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEA 682
Query: 657 IGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
+GK ++ L+ + +TV ++L AL+G EE+N++ ++KT ++ + ++VNAC S+
Sbjct: 683 MGKSLVSDLIYKENEETVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNACFSK 742
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE C EWN
Sbjct: 743 DYLNNIVGVCFVGQDVTGQKLVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWN 802
Query: 776 PAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPF 835
AM KLTGW R EVI K+L+ EVFG+ CC LK +A IVL+ A+ GQ+ +K PF
Sbjct: 803 MAMEKLTGWSRSEVIGKMLVGEVFGS---CCMLKGPDALTKFMIVLHNAIGGQETDKFPF 859
Query: 836 GFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKA 895
FF RNGK+ + LL NK++ +G V G FCFLQ+ S ELQQAL VQR + + K
Sbjct: 860 PFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKE 919
Query: 896 LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG 955
LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D DL+SI DG
Sbjct: 920 LAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESIEDG 979
Query: 956 YLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADF 1015
+L+M EF L V+ A +SQ M +G++++ + E+I S ++GD IR+QQ+LA+F
Sbjct: 980 SFELKMAEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIVVFGDQIRIQQLLAEF 1039
Query: 1016 LSISINFVPN 1025
L I + P+
Sbjct: 1040 LLSIIRYAPS 1049
>gi|164597988|gb|ABY61301.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1142 bits (2955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1060 (52%), Positives = 750/1060 (70%), Gaps = 20/1060 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 36 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 90
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 91 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTLE 148
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 149 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 208
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+++ V +LTGYDR
Sbjct: 209 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDR 268
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 269 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 328
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 329 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 388
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 389 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 448
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 449 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 508
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 509 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 568
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ D+++K +
Sbjct: 569 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE-SEADMNSKVVD 627
Query: 598 SKL--C-DLKIE-GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
+ C D+ E G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAELTGLSV
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 654 DKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNAC 712
++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + ++VNAC
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFTPELQGTAVFVVVNAC 747
Query: 713 ASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCC 772
+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE C
Sbjct: 748 SSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCL 807
Query: 773 EWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEK 832
EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ GQD +K
Sbjct: 808 EWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGGQDTDK 864
Query: 833 VPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKR 892
PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR + +
Sbjct: 865 FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTK 924
Query: 893 LKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSI 952
K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D DL+SI
Sbjct: 925 AKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESI 984
Query: 953 IDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVL 1012
DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR+QQ+L
Sbjct: 985 EDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLL 1044
Query: 1013 ADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
A+FL I + P+ + + S Q+ E R
Sbjct: 1045 AEFLLSIIRYAPSQEWVEIHLSQVSKQMADGFAAIRTEFR 1084
>gi|78643926|emb|CAJ21326.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 1142 bits (2955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/1059 (52%), Positives = 753/1059 (71%), Gaps = 27/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+VIAYSENA ++L + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G+D++ +F SA L+KA G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ GA+QS KLA +AI++LQSLP G ++ LCDT++ V LTGYD
Sbjct: 191 IVIDLEPARTEDPALSITGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRGLTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+ GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CC+LK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCKLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ +G + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIKGDIIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 902
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 903 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 962
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 963 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1022
Query: 1015 F-LSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
F L++ I + G + + T Q+ L + E R
Sbjct: 1023 FLLNMVIYTQSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1061
>gi|57791640|gb|AAW56588.1| phytochrome B [Arabidopsis thaliana]
Length = 1161
Score = 1142 bits (2955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1065 (52%), Positives = 749/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 35 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 89
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 90 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTLE 147
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 148 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 207
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 208 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 267
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 268 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 327
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 328 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 387
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 388 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 447
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 448 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 507
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 508 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 567
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 568 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 621
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 622 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 681
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 682 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 741
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 742 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 801
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI+K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 802 NTCCLEWNMAMEKLTGWSRSEVIEKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 858
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 859 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 918
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 919 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 978
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 979 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1038
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1039 IQQLLAEFLLSIIRYAPSQEWVEIHLSQVSKQMADGFAAIRTEFR 1083
>gi|312282447|dbj|BAJ34089.1| unnamed protein product [Thellungiella halophila]
Length = 1172
Score = 1142 bits (2954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/1012 (53%), Positives = 729/1012 (72%), Gaps = 14/1012 (1%)
Query: 20 ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ I Q T+DA+LHA FE SG SFDYS S++ +T G P ++ TAYL IQ+
Sbjct: 59 SKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGSSVP--EQQITAYLSRIQR 114
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAP 136
G IQPFGC++A+DE TF++I YSENA E+L + +VPS+ +L +G+D++++FTA
Sbjct: 115 GGYIQPFGCMIAVDESTFRIIGYSENAREMLGLTPQSVPSLEKPEILAMGTDVRSLFTAS 174
Query: 137 SASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ ++ID EP + + ++ AG
Sbjct: 175 SSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 234
Query: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEI 256
A+QS KLA +AI++LQSLP G ++ LCDT+++ V +LTGYDRVM YKFHED+HGEVV+E
Sbjct: 235 AVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAES 294
Query: 257 TKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGST 316
+ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V V+QD++L + L GST
Sbjct: 295 RRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQSMCLVGST 354
Query: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-RLWGLVVCHNTTPRFV 375
LRAPH CH QYM NM SIASL MAV++N E++G N + RLWGLVVCH+T+ R +
Sbjct: 355 LRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVAGGRNSMRLWGLVVCHHTSSRCI 414
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLCDML+RD+P GIVTQSP+I
Sbjct: 415 PFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSI 474
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAA LY K + LGV P + Q+ D+V WL H DSTGLS DSL DAGY GA
Sbjct: 475 MDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDVVEWLLANHADSTGLSTDSLGDAGYPGAA 534
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMA I+ +D +FWFRS TA E++WGGAK P++KDDG++MHPRSSFKAFLE
Sbjct: 535 ALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKRHPEDKDDGQRMHPRSSFKAFLE 594
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL-CDLKIEGMKELEAV 614
VVK+RS PW+ EMDAIHSLQLILR++FK+ L++K+ + C +G+ EL AV
Sbjct: 595 VVKSRSQPWETAEMDAIHSLQLILRDSFKE-SEAALNSKTADGAVQCMAGEQGIDELGAV 653
Query: 615 TSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTV 673
EMVRLIETATVPI AVD G +NGWN KIAELTGLSV++A+GK ++ L+ + +TV
Sbjct: 654 AREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETV 713
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
++L AL+G+E++N++ ++KT ++ + ++VNAC+S+D +N+VGVCFV QD+T
Sbjct: 714 DKLLSRALRGEEDKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTD 773
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
QK VMDKF I+GDYKAIV +PNPLIPPIF +DE C EWN AM LTGW R EVI K+
Sbjct: 774 QKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTAMENLTGWSRSEVIGKM 833
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
L+ EVFG+ CCRLK +A IVL+ A+ GQ+ +K PF FF R GK+ + LL NK
Sbjct: 834 LVGEVFGS---CCRLKGPDAITKFMIVLHNAIGGQETDKFPFPFFDRKGKFVQALLTANK 890
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
++ +G V G FCF+Q+ S ELQQA+ VQR + + K LAY + I+NPLSG+ F+
Sbjct: 891 RVSLDGKVIGAFCFVQIPSPELQQAIAVQRRQDTECFTKAKELAYICQVIKNPLSGLRFT 950
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVAS 973
++E T+L +QK+ L TS C++Q+ +I+ D DL+ I DG LE VEF L V+ A
Sbjct: 951 NSLLEATDLNEDQKQFLETSVSCEKQISRIVSDMDLEGIEDGSFKLERVEFFLGSVINAI 1010
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+SQ M +G++++ + E+I S +YGD R+QQ+LA+FL I + P+
Sbjct: 1011 VSQAMFLLKERGLQLIRDIPEEIKSIAVYGDQTRIQQLLAEFLLSIIRYAPS 1062
>gi|57791644|gb|AAW56590.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1142 bits (2954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1065 (52%), Positives = 748/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 36 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 90
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 91 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTLE 148
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 149 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 208
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 209 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 268
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 269 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 328
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 329 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 388
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 389 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 448
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 449 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 508
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 509 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 568
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 569 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 622
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 623 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 682
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 683 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 742
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 743 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 802
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 803 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 859
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 860 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 919
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 920 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIIGDM 979
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 980 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1039
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1040 IQQLLAEFLLSIIRYAPSQEWVEIHLSQVSKQMADGFAAIRTEFR 1084
>gi|164598000|gb|ABY61307.1| phytochrome B [Arabidopsis thaliana]
gi|164598002|gb|ABY61308.1| phytochrome B [Arabidopsis thaliana]
gi|164598010|gb|ABY61312.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1142 bits (2953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/1065 (52%), Positives = 748/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 36 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 90
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 91 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTLE 148
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 149 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 208
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT+++ V +LTGYDR
Sbjct: 209 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDR 268
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 269 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 328
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 329 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 388
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 389 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 448
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 449 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 508
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 509 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 568
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 569 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 622
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 623 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 682
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 683 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFTPELQGKAVFV 742
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 743 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 802
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 803 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 859
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 860 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 919
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 920 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 979
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 980 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1039
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1040 IQQLLAEFLLSIIRYAPSQEWVEIHLSQVSKQMADGFAAIRTEFR 1084
>gi|57791642|gb|AAW56589.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 1142 bits (2953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1065 (52%), Positives = 748/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 33 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 87
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 88 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTLE 145
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 146 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 205
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 206 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 265
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 266 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 325
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 326 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 385
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 386 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 445
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 446 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 505
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 506 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 565
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 566 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 619
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 620 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 679
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 680 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 739
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 740 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 799
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 800 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 856
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 857 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 916
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 917 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIIGDM 976
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 977 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1036
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1037 IQQLLAEFLLSIIRYAPSQEWVEIHLSQVSKQMADGFAAIRTEFR 1081
>gi|164597986|gb|ABY61300.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1142 bits (2953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1065 (52%), Positives = 748/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 36 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 90
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 91 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTLE 148
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 149 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 208
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 209 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 268
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 269 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 328
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 329 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 388
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 389 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 448
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 449 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 508
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 509 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 568
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 569 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 622
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 623 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 682
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 683 TGLSVEEAMGKSLVSDLIYKENKATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 742
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 743 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 802
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 803 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 859
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 860 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 919
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 920 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 979
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 980 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1039
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1040 IQQLLAEFLLSIIRYAPSQEWVEIHLSQVSKQMADGFAAIRTEFR 1084
>gi|39939388|gb|AAR32737.1| phytochrome B [Arabidopsis thaliana]
gi|164597996|gb|ABY61305.1| phytochrome B [Arabidopsis thaliana]
gi|164597998|gb|ABY61306.1| phytochrome B [Arabidopsis thaliana]
gi|164598004|gb|ABY61309.1| phytochrome B [Arabidopsis thaliana]
gi|164598006|gb|ABY61310.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1142 bits (2953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1065 (52%), Positives = 748/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 36 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 90
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 91 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTLE 148
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 149 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 208
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 209 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 268
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 269 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 328
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 329 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 388
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 389 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 448
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 449 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 508
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 509 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 568
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 569 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 622
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 623 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 682
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 683 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 742
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 743 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 802
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 803 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 859
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 860 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 919
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 920 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIIGDM 979
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 980 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1039
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1040 IQQLLAEFLLSIIRYAPSQEWVEIHLSQVSKQMADGFAAIRTEFR 1084
>gi|388458208|gb|AFK30970.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 1141 bits (2952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/1021 (54%), Positives = 729/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++I EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIGLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ CDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLPCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ + P K L GLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNIARGSTPSAMK-LRGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQ LLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQALLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>gi|57791616|gb|AAW56576.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 1141 bits (2952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1065 (52%), Positives = 748/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 33 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 87
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 88 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTLE 145
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 146 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 205
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 206 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 265
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 266 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 325
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 326 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 385
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 386 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 445
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 446 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 505
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 506 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 565
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 566 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 619
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 620 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 679
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 680 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 739
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 740 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 799
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 800 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 856
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 857 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 916
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 917 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 976
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 977 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1036
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1037 IQQLLAEFLLSIIRYAPSQEWVEIHLSQLSKQMADGFAAIRTEFR 1081
>gi|57791624|gb|AAW56580.1| phytochrome B [Arabidopsis thaliana]
gi|57791626|gb|AAW56581.1| phytochrome B [Arabidopsis thaliana]
gi|57791628|gb|AAW56582.1| phytochrome B [Arabidopsis thaliana]
gi|57791630|gb|AAW56583.1| phytochrome B [Arabidopsis thaliana]
gi|57791632|gb|AAW56584.1| phytochrome B [Arabidopsis thaliana]
gi|57791634|gb|AAW56585.1| phytochrome B [Arabidopsis thaliana]
gi|164597990|gb|ABY61302.1| phytochrome B [Arabidopsis thaliana]
gi|164597992|gb|ABY61303.1| phytochrome B [Arabidopsis thaliana]
gi|164597994|gb|ABY61304.1| phytochrome B [Arabidopsis thaliana]
gi|164598008|gb|ABY61311.1| phytochrome B [Arabidopsis thaliana]
gi|164598012|gb|ABY61313.1| phytochrome B [Arabidopsis thaliana]
gi|164598018|gb|ABY61316.1| phytochrome B [Arabidopsis thaliana]
gi|164598020|gb|ABY61317.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1141 bits (2952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1065 (52%), Positives = 748/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 36 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 90
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 91 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTLE 148
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 149 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 208
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 209 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 268
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 269 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 328
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 329 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 388
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 389 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 448
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 449 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 508
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 509 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 568
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 569 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 622
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 623 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 682
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 683 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 742
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 743 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 802
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 803 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 859
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 860 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 919
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 920 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 979
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 980 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1039
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1040 IQQLLAEFLLSIIRYAPSQEWVEIHLSQVSKQMADGFAAIRTEFR 1084
>gi|57791618|gb|AAW56577.1| phytochrome B [Arabidopsis thaliana]
Length = 1162
Score = 1141 bits (2951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1065 (52%), Positives = 748/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 37 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 91
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 92 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTLE 149
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 150 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 209
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 210 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 269
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 270 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 329
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 330 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 389
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 390 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 449
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 450 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 509
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 510 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 569
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 570 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 623
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 624 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 683
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 684 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 743
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 744 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 803
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 804 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 860
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 861 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 920
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 921 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 980
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 981 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1040
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1041 IQQLLAEFLLSIIRYAPSQEWVEIHLSQLSKQMADGFAAIRTEFR 1085
>gi|78643948|emb|CAJ21337.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1141 bits (2951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/1059 (52%), Positives = 749/1059 (70%), Gaps = 29/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+ IAY+ENA + + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRGIAYNENAKNMRGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G D++ +F SA L+K G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGGDVRILFRPSSAVLLEKTFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N A+ KLTGW R EV+ K+L+ EVFG+ CCRLK +A I L+ A+ G D +K+P
Sbjct: 786 NTALEKLTGWSRGEVVGKMLVGEVFGS---CCRLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIN--IIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 901 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 961 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1020
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1021 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|78643950|emb|CAJ21338.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 1141 bits (2951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/1059 (52%), Positives = 749/1059 (70%), Gaps = 29/1059 (2%)
Query: 7 AQSSSNTGKSRHS------ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGG 57
AQSS + +H ++ IAQ T+DA+LHA FE SG SFDYS SVR + +
Sbjct: 17 AQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVRTPNQSVP 76
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
++Q TAYL IQ+G IQPFGC++A DE++F+ IAY+ENA + + +VPS+
Sbjct: 77 EEQ------ITAYLSKIQRGGHIQPFGCMIAADEQSFRGIAYNENAKNMRGLTPQSVPSL 130
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+L +G D++ +F SA L+K G E++LLNPI +H K SGKPFYAI+HR+
Sbjct: 131 EKQEILFVGGDVRILFRPSSAVLLEKTFGAREITLLNPIWIHSKNSGKPFYAILHRIDVG 190
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCDT++ V ELTGYD
Sbjct: 191 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYD 250
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHED+HGEVV+E + LEPY+GLHYP+TDIPQA+RFLF +N+VRMIVDC A
Sbjct: 251 RVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIP 310
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV--NDEEEEGDNTLP 355
V V+QDE L L L GSTLRAPH CH QYMENM SIASL MAV++ NDEE G
Sbjct: 311 VSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGG---- 366
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+ RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+LEK++LRTQTL
Sbjct: 367 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTL 426
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + + LGVTP + Q+ DIV WL H
Sbjct: 427 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLH 486
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
D TGLS DSL DAGY GA LGD VCGMA I+ +D +FWFRS TA EV+WGGAKH P
Sbjct: 487 GDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHP 546
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D +
Sbjct: 547 EDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATN-SKAV 605
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+H++L D++++GM EL +V EMVRLIETAT PI AVDVDG +NGWN K+AELTGLSV++
Sbjct: 606 VHNQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEE 665
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + LV + V ++++ A++G+E++N++ +++T S+ + ++VNAC+S
Sbjct: 666 AMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSS 725
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D DN+VGVCFV QD+T QK VMDK+ I+GDYKAIV +PNP IPPIF SDE C EW
Sbjct: 726 KDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEW 785
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KLTGW R EV+ K+L+ EVFG+ CC+LK +A I L+ A+ G D +K+P
Sbjct: 786 NTAMEKLTGWSRGEVVGKMLVGEVFGS---CCKLKGPDALTKFMIALHNAIGGIDTDKLP 842
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F FF RN K + LL NK+++ + G FCFLQ+AS ELQ +L VQ+ E+ + R+K
Sbjct: 843 FSFFDRNEKNVQTLLTANKRVNIN--IIGAFCFLQIASPELQPSLKVQKQQEKKSFARMK 900
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++I+NPLSGI F+ ++E T+L +Q++ L TSA C++Q+ KI+ D DL+SI +
Sbjct: 901 ELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIEN 960
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQ M+ + ++++ + E+I + +YGD R+QQVLAD
Sbjct: 961 GSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLAD 1020
Query: 1015 FLSISINFVP-NGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL + + P + G + + T Q+ L + E R
Sbjct: 1021 FLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFR 1059
>gi|57791636|gb|AAW56586.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1141 bits (2951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/1038 (53%), Positives = 741/1038 (71%), Gaps = 30/1038 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 36 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 90
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 91 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTLE 148
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 149 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 208
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 209 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 268
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 269 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 328
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 329 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 388
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 389 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 448
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 449 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 508
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 509 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 568
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 569 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 622
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 623 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 682
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 683 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 742
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 743 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 802
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 803 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 859
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 860 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 919
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 920 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 979
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 980 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1039
Query: 1008 LQQVLADFLSISINFVPN 1025
+QQ+LA+FL I + P+
Sbjct: 1040 IQQLLAEFLLSIIRYAPS 1057
>gi|57791620|gb|AAW56578.1| phytochrome B [Arabidopsis thaliana]
gi|57791622|gb|AAW56579.1| phytochrome B [Arabidopsis thaliana]
gi|164598016|gb|ABY61315.1| phytochrome B [Arabidopsis thaliana]
gi|164598022|gb|ABY61318.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1065 (52%), Positives = 748/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 36 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 90
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 91 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTLE 148
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 149 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 208
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 209 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 268
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 269 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 328
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 329 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 388
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 389 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 448
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 449 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 508
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 509 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 568
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 569 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 622
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 623 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 682
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 683 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 742
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 743 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 802
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 803 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 859
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 860 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 919
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 920 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 979
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 980 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1039
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1040 IQQLLAEFLLSIIRYAPSQEWVEIHLSQLSKQMADGFAAIRTEFR 1084
>gi|15224231|ref|NP_179469.1| phytochrome B [Arabidopsis thaliana]
gi|130189|sp|P14713.1|PHYB_ARATH RecName: Full=Phytochrome B
gi|16423|emb|CAA35222.1| unnamed protein product [Arabidopsis thaliana]
gi|4185145|gb|AAD08948.1| phytochrome B [Arabidopsis thaliana]
gi|330251714|gb|AEC06808.1| phytochrome B [Arabidopsis thaliana]
Length = 1172
Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1065 (52%), Positives = 748/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 40 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 94
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 95 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTLE 152
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 153 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 212
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 213 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 272
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 273 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 332
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 333 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 392
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 393 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 452
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 453 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 512
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 513 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 572
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 573 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 626
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 627 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 686
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 687 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 746
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 747 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 806
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 807 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 863
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 864 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 923
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 924 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 983
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 984 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1043
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1044 IQQLLAEFLLSIIRYAPSQEWVEIHLSQLSKQMADGFAAIRTEFR 1088
>gi|108802811|gb|ABG21356.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1140 bits (2949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/1047 (52%), Positives = 747/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS SV ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L+D L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSDTLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|57791652|gb|AAW56594.1| phytochrome D [Arabidopsis thaliana]
gi|57791654|gb|AAW56595.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1140 bits (2948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1059 (52%), Positives = 742/1059 (70%), Gaps = 17/1059 (1%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG SFDYS S + TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSRK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+ NT +
Sbjct: 337 VVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSD 516
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY A ALGD VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK--- 594
KDDG++M+PRSSF+AFLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D
Sbjct: 577 KDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
++ D+ +GM+E+ AV EMVRLIETATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A+GK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DAMGKSLVRELIYKEYKETVDRLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ KI+ D D+ SI
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG LE EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>gi|57791614|gb|AAW56575.1| phytochrome B [Arabidopsis thaliana]
Length = 1162
Score = 1139 bits (2947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1065 (52%), Positives = 748/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 37 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 91
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 92 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTLE 149
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 150 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 209
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 210 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 269
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 270 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 329
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 330 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 389
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 390 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 449
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 450 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 509
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 510 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 569
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 570 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 623
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 624 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 683
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 684 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 743
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 744 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 803
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 804 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 860
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 861 QDTDKFPFPFFDRNGKFVQALLTANKRVILEGKVIGAFCFLQIPSPELQQALAVQRRQDT 920
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 921 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 980
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 981 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1040
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1041 IQQLLAEFLLSIIRYAPSQEWVEIHLSQLSKQMADGFAAIRTEFR 1085
>gi|57791668|gb|AAW56602.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1139 bits (2946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1059 (52%), Positives = 743/1059 (70%), Gaps = 17/1059 (1%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG SFDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+ NT +
Sbjct: 337 VVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSD 516
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY A ALGD VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK--- 594
KDDG++M+PRSSF+AFLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D
Sbjct: 577 KDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
++ D+ +GM+E+ AV EMVRLI+TATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIKTATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A+GK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DAMGKSLVRELIYKEYKETVDRLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ KI+ D D+ SI
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG LE EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>gi|164598014|gb|ABY61314.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 1139 bits (2946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1065 (52%), Positives = 747/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 36 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 90
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 91 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTLE 148
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 149 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 208
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 209 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 268
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 269 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 328
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 329 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 388
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 389 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 448
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 449 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 508
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 509 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 568
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 569 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 622
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 623 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 682
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 683 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 742
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 743 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 802
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 803 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 859
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 860 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 919
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ + ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 920 ECFTKAKELAYICQVIKNPLSGMRLANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 979
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 980 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1039
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1040 IQQLLAEFLLSIIRYAPSQEWVEIHLSQVSKQMADGFAAIRTEFR 1084
>gi|108802766|gb|ABG21334.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802768|gb|ABG21335.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1139 bits (2946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/1047 (51%), Positives = 747/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLVVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV+SE + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVISECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|57791638|gb|AAW56587.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 1139 bits (2946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1065 (52%), Positives = 747/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 33 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 87
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 88 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTLE 145
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 146 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 205
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 206 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 265
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 266 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 325
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 326 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 385
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 386 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 445
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 446 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 505
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 506 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 565
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 566 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 619
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 620 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 679
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 680 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 739
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 740 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 799
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 800 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 856
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 857 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 916
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ + ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 917 ECFTKAKELAYICQVIKNPLSGMRLANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 976
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 977 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1036
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1037 IQQLLAEFLLSIIRYAPSQEWVEIHLSQVSKQMADGFAAIRTEFR 1081
>gi|57791679|gb|AAW56607.1| phytochrome B [Cleome hassleriana]
Length = 1045
Score = 1139 bits (2946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/992 (54%), Positives = 727/992 (73%), Gaps = 10/992 (1%)
Query: 39 SGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIA 98
SG SFDYS S++ +T G P ++ TAYL IQ+G IQPFGC++A+DE TFK+I+
Sbjct: 3 SGKSFDYSRSLK--TTTYGSSVP--EKQITAYLSKIQRGGYIQPFGCMIAVDESTFKIIS 58
Query: 99 YSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILV 158
YSENA E+L ++ +VPS+ +L IG+D++++FT S L++A E++LLNP+ +
Sbjct: 59 YSENAREMLGLMPQSVPSIEKPEILAIGTDVRSLFTPSSTVLLERAFVAREITLLNPVWI 118
Query: 159 HCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGS 218
H K +GKPFYAI+HR+ ++ID EP + + ++ AGA+QS KLA +AI++LQSLP G
Sbjct: 119 HSKNTGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGD 178
Query: 219 MERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAA 278
++ LCDT+++ V +LTGYDRVM YKFHED+HGEVV+E ++ LEPY+GLHYPATDIPQA+
Sbjct: 179 IKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRADLEPYIGLHYPATDIPQAS 238
Query: 279 RFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLV 338
RFLF +N+VRMIVDC A V V+QDE+L L L GSTLRAPH CH QYM NM S+ASL
Sbjct: 239 RFLFKQNRVRMIVDCHATPVCVIQDERLTQPLCLVGSTLRAPHGCHAQYMANMGSLASLA 298
Query: 339 MAVVVN-DEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE 397
MAV++N +EEE G + RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N E
Sbjct: 299 MAVIINGNEEEAGSVAGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNME 358
Query: 398 LELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGV 457
L+L Q+ EK +LRTQTLLCDML+RD+P GIVTQ P+IMDLVKCDGAA LY+ + + LGV
Sbjct: 359 LQLALQMSEKRVLRTQTLLCDMLLRDSPTGIVTQKPSIMDLVKCDGAAFLYQGRYYPLGV 418
Query: 458 TPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFW 517
P++ Q+ DIV WL H DSTGLS DSL DAGY GA LGD VCGMA I+ KD +FW
Sbjct: 419 APSEAQIKDIVEWLLANHGDSTGLSTDSLADAGYPGAATLGDAVCGMAVAYITRKDFLFW 478
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FRS TA E++WGGAKH P++KDD ++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQL
Sbjct: 479 FRSHTAKEIKWGGAKHHPEDKDDSQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQL 538
Query: 578 ILRNAFKDVGTLDLDTK-SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
ILR++FK+ T++ D+ ++G+ EL AV EMVRLIETATVPILAVDV+G
Sbjct: 539 ILRDSFKESETVNTRVAVRADQPGGDMAVQGLDELSAVAREMVRLIETATVPILAVDVEG 598
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKT 695
+NGWN KIAELTGLSV++A+GK + L+ +TV+++L AL+G+E++N++ ++KT
Sbjct: 599 RINGWNGKIAELTGLSVEEAMGKSLVRDLIYKEYEETVEKLLSHALRGEEDKNVEIKMKT 658
Query: 696 HGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNP 755
++ + ++VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +P
Sbjct: 659 FSRELEGQAVFVVVNACSSKDYLNNIVGVCFVGQDVTGQKIVMDKFIHIQGDYKAIVHSP 718
Query: 756 NPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFV 815
NPLIPPIF +DE C EWN AM KLTGW R EVI K+L+ EVFG+ CCRLK +
Sbjct: 719 NPLIPPIFAADENTCCLEWNTAMEKLTGWSRAEVIGKMLVGEVFGS---CCRLKGPDTLT 775
Query: 816 NLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHEL 875
IVL+ A+ G++ +K F FF RNGK+ + LL NK++ +G +TG FCF+Q+ S EL
Sbjct: 776 KFMIVLHNAIGGEETDKFSFPFFDRNGKFVQALLTANKRVSIDGKITGAFCFMQIPSPEL 835
Query: 876 QQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQ 935
QQAL VQR E + R K LAY + I+NPLSG+ F+ ++E T L +QK+LL TS
Sbjct: 836 QQALAVQRQQETECISRAKELAYICQVIKNPLSGLRFTNLLLEATGLSEDQKQLLETSVS 895
Query: 936 CQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQ 995
C++Q+ +I+ D +L++I DG +++E EF + V+ A +SQVMM +G++++ + E+
Sbjct: 896 CEKQISRIIGDMNLETIEDGLVEVEKEEFIMGSVINAVVSQVMMLVRERGLQLIRDIPEE 955
Query: 996 IMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
I + +YGD +R+QQVLA+FL I + P+ G
Sbjct: 956 IKTMAVYGDQMRIQQVLAEFLLSIIKYAPSQG 987
>gi|57791656|gb|AAW56596.1| phytochrome D [Arabidopsis thaliana]
gi|57791658|gb|AAW56597.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1059 (52%), Positives = 742/1059 (70%), Gaps = 17/1059 (1%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG SFDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKF ED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFREDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASAVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+ NT +
Sbjct: 337 VVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSD 516
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY A ALGD VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDAGYPRAAALGDAVCGMAIACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK--- 594
KDDG++M+PRSSF+AFLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D
Sbjct: 577 KDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
++ D+ +GM+E+ AV EMVRLIETATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
AIGK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DAIGKSLVRELIYKEYKETVDRLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ KI+ D D+ SI
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG LE EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>gi|57791674|gb|AAW56605.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1059 (52%), Positives = 742/1059 (70%), Gaps = 17/1059 (1%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG SFDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVEIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+ NT +
Sbjct: 337 VVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVT P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTXRPSIMDLVKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSD 516
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY A ALGD VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK--- 594
KDDG++M+PRSSF+AFLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D
Sbjct: 577 KDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
++ D+ +GM+E+ AV EMVRLIETATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A+GK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DAMGKSLVRELIYKEYKETVDRLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ KI+ D D+ SI
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG LE EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>gi|108802772|gb|ABG21337.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802777|gb|ABG21339.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802779|gb|ABG21340.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802785|gb|ABG21343.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802787|gb|ABG21344.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802789|gb|ABG21345.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802791|gb|ABG21346.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802801|gb|ABG21351.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802813|gb|ABG21357.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802817|gb|ABG21359.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/1047 (51%), Positives = 747/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS SV ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|57791664|gb|AAW56600.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1059 (52%), Positives = 741/1059 (69%), Gaps = 17/1059 (1%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG SFDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+ NT +
Sbjct: 337 VVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSD 516
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY A ALGD VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK--- 594
KDDG++M+PRSSF+AFLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D
Sbjct: 577 KDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
++ D+ +GM+E+ AV EMVRLI TATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIXTATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A GK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DAXGKSLVRELISKEYKETVDRLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ KI+ D D+ SI
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG LE EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>gi|108802793|gb|ABG21347.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802795|gb|ABG21348.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802799|gb|ABG21350.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802803|gb|ABG21352.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802805|gb|ABG21353.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/1047 (51%), Positives = 747/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SAL+KA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++ +W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV IS KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QKT+ + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + EK+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALR 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|343408417|gb|AEM06734.1| phytochrome C [Arabidopsis thaliana]
gi|343408419|gb|AEM06735.1| phytochrome C [Arabidopsis thaliana]
gi|343408425|gb|AEM06738.1| phytochrome C [Arabidopsis thaliana]
gi|343408429|gb|AEM06740.1| phytochrome C [Arabidopsis thaliana]
gi|343408431|gb|AEM06741.1| phytochrome C [Arabidopsis thaliana]
gi|343408435|gb|AEM06743.1| phytochrome C [Arabidopsis thaliana]
gi|343408437|gb|AEM06744.1| phytochrome C [Arabidopsis thaliana]
gi|343408445|gb|AEM06748.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/1047 (51%), Positives = 747/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS SV ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|108802807|gb|ABG21354.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1138 bits (2944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/1047 (51%), Positives = 747/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SAL+KA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++ +W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV IS KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QKT+ + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + EK+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALR 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVKLEFR 1045
>gi|108802783|gb|ABG21342.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802815|gb|ABG21358.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1138 bits (2944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/1047 (51%), Positives = 747/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|15239211|ref|NP_198433.1| phytochrome C [Arabidopsis thaliana]
gi|130192|sp|P14714.1|PHYC_ARATH RecName: Full=Phytochrome C
gi|16425|emb|CAA35223.1| unnamed protein product [Arabidopsis thaliana]
gi|10176703|dbj|BAB09925.1| phytochrome C [Arabidopsis thaliana]
gi|332006638|gb|AED94021.1| phytochrome C [Arabidopsis thaliana]
gi|343408415|gb|AEM06733.1| phytochrome C [Arabidopsis thaliana]
gi|343408427|gb|AEM06739.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1138 bits (2944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/1047 (51%), Positives = 747/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SAL+KA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++ +W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV IS KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QKT+ + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + EK+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALR 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|343408423|gb|AEM06737.1| phytochrome C [Arabidopsis thaliana]
gi|343408443|gb|AEM06747.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1138 bits (2944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/1047 (51%), Positives = 747/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTDQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|57791670|gb|AAW56603.1| phytochrome D [Arabidopsis thaliana]
gi|57791672|gb|AAW56604.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1138 bits (2943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1059 (52%), Positives = 743/1059 (70%), Gaps = 17/1059 (1%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG SFDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAIEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEV++E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFHEDEHGEVLAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+ NT +
Sbjct: 337 VVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSD 516
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY A ALGD VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK--- 594
KDDG++M+PRSSF+AFLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D
Sbjct: 577 KDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
++ D+ +GM+E+ AV EMVRLI+TATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIKTATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A+GK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DAMGKSLVRELIYKEYKETVDRLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ KI+ D D+ SI
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG LE EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>gi|108802809|gb|ABG21355.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1138 bits (2943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/1047 (51%), Positives = 747/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SAL+KA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVKINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++ +W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV IS KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QKT+ + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + EK+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALR 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVKLEFR 1045
>gi|343408411|gb|AEM06731.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1138 bits (2943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/1047 (51%), Positives = 747/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|57791660|gb|AAW56598.1| phytochrome D [Arabidopsis thaliana]
Length = 1126
Score = 1138 bits (2943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1059 (52%), Positives = 741/1059 (69%), Gaps = 17/1059 (1%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG SFDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKF ED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFREDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASAVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+ NT +
Sbjct: 337 VVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSD 516
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY A ALGD VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDAGYPRAAALGDAVCGMAIACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK--- 594
KDDG++M+PRSSF+AFLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D
Sbjct: 577 KDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
++ D+ +GM+E+ AV EMVRLIETATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
AIGK + L+ +TV R+L AL+G E +N+ ++KT GS++ + ++VNAC+
Sbjct: 697 DAIGKSLVRELIYKEYKETVDRLLSXALKGDEGKNVXVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ KI+ D D+ SI
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG LE EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>gi|57791666|gb|AAW56601.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1059 (52%), Positives = 742/1059 (70%), Gaps = 17/1059 (1%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG SFDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+ NT +
Sbjct: 337 VVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSD 516
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY A ALGD VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK--- 594
KDDG++M+PRSSF+AFLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D
Sbjct: 577 KDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
++ D+ +GM+E+ AV EMVRLIETATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A+GK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DALGKSLVRELISKEYKETVDRLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLI PIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLILPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ KI+ D D+ SI
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG LE EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>gi|343408413|gb|AEM06732.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/1047 (51%), Positives = 746/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS SV ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P ++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPIDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|343408439|gb|AEM06745.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1137 bits (2941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/1047 (51%), Positives = 746/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSFGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|108802823|gb|ABG21362.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1137 bits (2941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/1047 (51%), Positives = 746/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSESLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|108802821|gb|ABG21361.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1137 bits (2940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/1047 (51%), Positives = 746/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS SV ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P ++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPIDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|37623877|gb|AAQ95581.1| phytochrome c [Arabidopsis thaliana]
Length = 1111
Score = 1137 bits (2940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/1047 (51%), Positives = 746/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|108802797|gb|ABG21349.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1137 bits (2940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/1047 (51%), Positives = 747/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SAL+KA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++ +W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV IS KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QKT+ + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALR 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|108802770|gb|ABG21336.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802775|gb|ABG21338.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1136 bits (2939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/1047 (51%), Positives = 746/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELT YDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|108802781|gb|ABG21341.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 1136 bits (2938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/1047 (51%), Positives = 746/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQ FGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQTFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|297801114|ref|XP_002868441.1| hypothetical protein ARALYDRAFT_493637 [Arabidopsis lyrata subsp.
lyrata]
gi|297314277|gb|EFH44700.1| hypothetical protein ARALYDRAFT_493637 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 1136 bits (2938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/1047 (52%), Positives = 747/1047 (71%), Gaps = 9/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + S V+T
Sbjct: 6 SRSCSTRSRKNSRVSSQVLVDAKLHTNFEESERLFDYSASINLNMPSSSSCEIPSSAVST 65
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L + H VPS+ L IG+D
Sbjct: 66 -YLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLTPHTVPSMEQREALSIGTD 124
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 125 VKSLFQSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 184
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAA +I+RLQ+LP G+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 185 EVPVTAAGALRSYKLAAISISRLQALPGGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 244
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + LEPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 245 HGEVIAECCREDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 304
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 305 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 364
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRF+PFPLRYACEFL QVF + VNKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 365 HASPRFLPFPLRYACEFLTQVFGVQVNKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 424
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y+ K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 425 VTQSPNIMDLVKCDGAALYYREKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 484
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 485 SGYPDASVLGESICGMAAVYITDKDFLFWFRSGTAKQIQWGGARHDPNDR-DGKRMHPRS 543
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + +D + ++ D +++ +
Sbjct: 544 SFKAFMEIVRWKSMPWDDMEMDAINSLQLIIKGSLQD----EHSKTVVNVPFVDNRVQKV 599
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE++GL++++AIGK LVED
Sbjct: 600 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVSGLAIEQAIGKPVSDLVEDD 659
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S +TVK ML LAL+G EE+ I+ G K PI L+VN C SRD +NV+GVCF+
Sbjct: 660 SAETVKNMLALALEGSEERGAAIRIRAFGPKRKSSPIELVVNTCCSRDRTNNVLGVCFIG 719
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QKT+++ ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 720 QDVTGQKTLIENYSRVQGDYARIMWSPSTLIPPIFMTNENGLCSEWNNAMQKLSGIKREE 779
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++KL+L EVF ++ CRLK+ + L I N +SGQ + EK+ FGF+ R+G + E
Sbjct: 780 VVNKLILGEVFTSDDYGCRLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 839
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SEQ LAY +++++NP
Sbjct: 840 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQVSEQVIACAFNKLAYLRQEVKNPE 899
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QK+LL TS C+ QL K++ DSD+D I +GY++L+ EF L
Sbjct: 900 QAISFLQDLLHSSGLSEDQKKLLRTSVLCREQLAKVIRDSDIDGIEEGYVELDCSEFNLE 959
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I+ + ++++S LYGD++RLQQ+L++ L SI F P
Sbjct: 960 ESLEAVVKQVMELSIERKVQIICDYPQEVLSMRLYGDNLRLQQILSETLLSSIRFTPALK 1019
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1020 GLCVSFKVIARIEAIGKRMKRVELEFR 1046
>gi|297800528|ref|XP_002868148.1| phytochrome D [Arabidopsis lyrata subsp. lyrata]
gi|297313984|gb|EFH44407.1| phytochrome D [Arabidopsis lyrata subsp. lyrata]
Length = 1165
Score = 1135 bits (2937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/1068 (52%), Positives = 738/1068 (69%), Gaps = 24/1068 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSA------RVIAQTTIDAKLHADFETSG---TSFDYSNSVRVS 52
SS+ AQ S N H A + I Q T+DA+LHA FE SG SFDYS S++
Sbjct: 34 SSASKAQRSQNQQPQNHGAGTESTSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK-- 91
Query: 53 STAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNH 112
TA D ++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++
Sbjct: 92 -TAPYDPSVPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQ 149
Query: 113 AVPSVGD-HPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIV 171
+VPS+ + VL IG+D++++F + S L++A E++LLNPI +H K +GKPFYAI+
Sbjct: 150 SVPSIKEISEVLTIGTDLRSLFKSSSIVLLERAFVAREITLLNPIWIHSKNTGKPFYAIL 209
Query: 172 HRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVF 231
HRV ++ID EP + + ++ AGA+QS KLA +AI+ LQSLP G ++ LCDT++ V
Sbjct: 210 HRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVR 269
Query: 232 ELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIV 291
+LTGYDRVM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIV
Sbjct: 270 DLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIV 329
Query: 292 DCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD 351
DC A V+V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+
Sbjct: 330 DCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGN 389
Query: 352 ---NTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKN 408
NT + RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK
Sbjct: 390 GGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKR 449
Query: 409 ILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIV 468
+LR QTLLCDML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGV P + Q++DIV
Sbjct: 450 VLRMQTLLCDMLLRDSPTGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQINDIV 509
Query: 469 SWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRW 528
WL H DSTGLS DSL DAGY A ALGD VCGMA I+ +D +FWFRS T E++W
Sbjct: 510 EWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKW 569
Query: 529 GGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGT 588
GGAKH P++KDDG++MHPRSSF+AFLEVVK++ PW+ EMDAIHSLQLILR++FK+
Sbjct: 570 GGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSQCQPWETAEMDAIHSLQLILRDSFKESEA 629
Query: 589 LDLDTKS---IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKI 645
+D + + D+ +GM+E+ AV EM+RLIETATVPI AVD+DG +NGWN KI
Sbjct: 630 MDSKASAPGGVQPHGDDMAEQGMQEIGAVAREMIRLIETATVPIFAVDIDGCINGWNAKI 689
Query: 646 AELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDP 704
AELTGLSV++A+GK + L+ +T R+L AL+G E +N++ ++KT G ++
Sbjct: 690 AELTGLSVEEAMGKSLVRDLIYKEYKETADRLLSCALKGDEGKNVEVKLKTFGPELQGKA 749
Query: 705 ITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG 764
+ ++VNAC+S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF
Sbjct: 750 VFVVVNACSSKDYLNNIVGVCFVGQDVTGHKFVMDKFINIQGDYKAIIHSPNPLIPPIFA 809
Query: 765 SDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKA 824
+DE C EWN AM KLTGW R EVI KLL+ EVFG+ CCRLK +A IVL+ A
Sbjct: 810 ADENTCCIEWNTAMEKLTGWPRSEVIGKLLVREVFGS---CCRLKGPDALTKFMIVLHNA 866
Query: 825 MSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRL 884
+ GQ+ +K PF FF R GK+ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR
Sbjct: 867 IGGQETDKFPFPFFDREGKFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRR 926
Query: 885 SEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKIL 944
E R K LAY + I+NPLSG+ F+ ++E T L +QK+LL TS C++Q+ KI+
Sbjct: 927 QESEYFSRRKELAYIFQFIKNPLSGLRFTNSLLEATNLNEDQKQLLETSVSCEKQISKIV 986
Query: 945 DDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGD 1004
+ D+ SI DG LE EF + V+ A +SQVM + I+++ +I S +YGD
Sbjct: 987 GEMDVKSIEDGSFLLERTEFFIGSVINAVVSQVMFVVRERNIQLIRNIPAEIKSMAVYGD 1046
Query: 1005 SIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
IRLQQVLA+FL + + P G + + Q+ LE R
Sbjct: 1047 QIRLQQVLAEFLLSIVRYAPLEGSVELHLCPVLKQMADGFSAIRLEFR 1094
>gi|343408433|gb|AEM06742.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1135 bits (2937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/1047 (51%), Positives = 746/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS SV ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ + RFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASLRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|57791662|gb|AAW56599.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1135 bits (2936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1059 (52%), Positives = 742/1059 (70%), Gaps = 17/1059 (1%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG SFDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+ NT +
Sbjct: 337 VVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMCSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LG+TP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGMTPTDSQINDIVEWLLANHSD 516
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY A ALGD VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK--- 594
KDDG++M+PRSSF+AFLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D
Sbjct: 577 KDDGQRMNPRSSFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
++ D+ +GM+E+ AV EMVRLIETATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVXQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A+GK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DAMGKSLVRELIYKEYKETVDRLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
F FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 SFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ KI+ D D+ SI
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG LE EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSIAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>gi|576939|emb|CAA83549.1| phyC [Arabidopsis thaliana]
gi|343408441|gb|AEM06746.1| phytochrome C [Arabidopsis thaliana]
gi|385654208|gb|AFI61904.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1135 bits (2936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/1047 (51%), Positives = 746/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELT YDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|343408421|gb|AEM06736.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1135 bits (2936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/1047 (51%), Positives = 746/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELT YDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HGSPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK + + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKKLTENYSRVQGDYARIMWSPSTLIPPIFMTNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + +K+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIKKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPK 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPAWK 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>gi|57791650|gb|AAW56593.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1135 bits (2936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/1059 (52%), Positives = 740/1059 (69%), Gaps = 17/1059 (1%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG SFDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+ NT +
Sbjct: 337 VVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSD 516
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL D GY A ALGD VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDGGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK--- 594
KDDG++M+PRSSF+ FLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D
Sbjct: 577 KDDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
++ D+ +GM+E+ AV EMVRLIETATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A+GK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DAMGKSLVRELIYKEYKETVDRLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPI +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPILAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ KI+ D D+ SI
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG LE EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>gi|108802819|gb|ABG21360.1| PHYTOCHROME C [Arabidopsis lyrata]
Length = 1055
Score = 1135 bits (2936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/1047 (52%), Positives = 747/1047 (71%), Gaps = 9/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + S V+T
Sbjct: 6 SRSCSTRSRKNSRVSSQVLVDAKLHTNFEESERLFDYSASINLNMPSSSSCEIPSSAVST 65
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L + H VPS+ L IG+D
Sbjct: 66 -YLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLTPHTVPSMEQREALSIGTD 124
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SALQKA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 125 VKSLFQSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 184
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAA +I+RLQ+LP G+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 185 EVPVTAAGALRSYKLAAISISRLQALPGGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 244
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + LEPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 245 HGEVIAECCREDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 304
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 305 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 364
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRF+PFPLRYACEFL QVF + VNKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 365 HASPRFLPFPLRYACEFLTQVFGVQVNKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 424
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y+ K+W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 425 VTQSPNIMDLVKCDGAALYYREKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 484
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV I+ KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 485 SGYPDASVLGESICGMAAVYITDKDFLFWFRSGTAKQIQWGGARHDPNDR-DGKRMHPRS 543
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + +D + ++ D +++ +
Sbjct: 544 SFKAFMEIVRWKSMPWDDMEMDAINSLQLIIKGSLQD----EHSKTVVNVPFVDNRVQKV 599
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE++GL++++AIGK LVED
Sbjct: 600 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVSGLAIEQAIGKPVSDLVEDD 659
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S +TVK ML LAL+G EE+ I+ G K PI L+VN C SRD +NV+GVCF+
Sbjct: 660 SAETVKNMLALALEGSEERGAAIRIRAFGPKRKSSPIELVVNTCCSRDRTNNVLGVCFIG 719
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QKT+++ ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 720 QDVTGQKTLIENYSRVQGDYARIMWSPSTLIPPIFMTNENGLCSEWNNAMQKLSGIKREE 779
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++KL+L EVF ++ CRLK+ + L I N +SGQ + EK+ FGF+ R+G + E
Sbjct: 780 VVNKLILGEVFTSDDYGCRLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 839
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SEQ LAY +++++NP
Sbjct: 840 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQVSEQVIACAFNKLAYLRQEVKNPE 899
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QK+LL TS C+ QL K++ DSD+D I +GY++L+ EF L
Sbjct: 900 QAISFLQDLLHSSGLSEDQKKLLRTSVLCREQLAKVIRDSDIDGIEEGYVELDCSEFNLE 959
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I+ + ++++S LYGD++RLQQ+L++ L SI F P
Sbjct: 960 ESLEAVVKQVMELSIERKVQIICDYPQEVLSMRLYGDNLRLQQILSETLLSSIRFTPALK 1019
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1020 GLCVSFKVIARIEAIGKRMKRVELEFR 1046
>gi|15234859|ref|NP_193360.1| phytochrome D [Arabidopsis thaliana]
gi|12644264|sp|P42497.2|PHYD_ARATH RecName: Full=Phytochrome D
gi|2244983|emb|CAB10404.1| phytochrome D [Arabidopsis thaliana]
gi|7268374|emb|CAB78667.1| phytochrome D [Arabidopsis thaliana]
gi|332658321|gb|AEE83721.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1135 bits (2935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1059 (52%), Positives = 741/1059 (69%), Gaps = 17/1059 (1%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG SFDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+ NT +
Sbjct: 337 VVQDDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSD 516
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY A ALGD VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK--- 594
KDDG++M+PRSSF+ FLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D
Sbjct: 577 KDDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
++ D+ +GM+E+ AV EMVRLIETATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A+GK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DAMGKSLVRELIYKEYKETVDRLLSCALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I+NPLSG+ F+ ++E +L +QK+LL TS C++Q+ KI+ D D+ SI
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG LE EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>gi|57791648|gb|AAW56592.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1135 bits (2935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/1059 (52%), Positives = 740/1059 (69%), Gaps = 17/1059 (1%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG SFDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+ NT +
Sbjct: 337 VVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSD 516
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL D GY A ALGD VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDGGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK--- 594
KDDG++M+PR SF+ FLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D
Sbjct: 577 KDDGQRMNPRCSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
++ D+ +GM+E+ AV EMVRLIETATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A+GK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DAMGKSLVRELIYKEYKETVDRLLSSALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ KI+ D D+ SI
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDTDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG LE EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>gi|240119405|dbj|BAH79251.1| phytochrome B [Cardamine resedifolia]
Length = 1184
Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1059 (52%), Positives = 743/1059 (70%), Gaps = 18/1059 (1%)
Query: 3 SSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQ 59
S RP Q+ + S + I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 48 SLRPQQNQPQSHTVSMS-KAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLK--TTTYGSS 104
Query: 60 QPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD 119
P ++ TAYL IQ+G IQPFGC++A+DE TF++I YSENA E+L ++ +VPS+
Sbjct: 105 VP--EQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEK 162
Query: 120 HPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
+L +G+D++++F S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ ++
Sbjct: 163 PEILAMGTDVRSLFAPSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVV 222
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+RLQSLP G ++ LCDT+++ V +LTGYDRV
Sbjct: 223 IDLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRV 282
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 283 MVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVL 342
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK 359
++QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G N +
Sbjct: 343 LVQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGRNAGGGRNS 402
Query: 360 -RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
+LWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLCD
Sbjct: 403 MKLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCD 462
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
ML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P + Q+ DIV WL H DS
Sbjct: 463 MLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADS 522
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++K
Sbjct: 523 TGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDK 582
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DDG++MHPRSSFKAFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++K++
Sbjct: 583 DDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE-SEAAMNSKAVDG 641
Query: 599 KL--C-DLKIE-GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
+ C D+ E G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAELTGLSV+
Sbjct: 642 AVQPCRDMSGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVE 701
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
+A+GK ++ L+ + +TV ++L AL+G+E++N++ ++KT ++ + +IVNAC+
Sbjct: 702 EAMGKSLVSDLIYKENEETVNKLLSRALKGEEDKNVELKLKTFSPELQGKAVFMIVNACS 761
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE C E
Sbjct: 762 SKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTICLE 821
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN A+ KLTG R EVI K+L+ EVFG CCRLK +A IVL+ A+ GQ+ +K
Sbjct: 822 WNAALEKLTGVSRGEVIGKMLVGEVFGN---CCRLKGPDALTRFMIVLHNAIGGQETDKF 878
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF RNGK+ + LL NK++ +G V G FCFLQ+ S ELQQAL VQR + +
Sbjct: 879 PFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKA 938
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I++PLSG+ F+ ++E T L +QK+ L TS C++Q+ +I+ D DL+SI
Sbjct: 939 KELAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIE 998
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG +L EF L ++ A +SQ M +G++++ + E+I S +YGD R+QQ+LA
Sbjct: 999 DGSFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAVYGDQTRIQQLLA 1058
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL I + P+ + + S Q + E R
Sbjct: 1059 EFLLSIIRYAPSQEWVEIHLSQVSKQTADGLRAIRTEFR 1097
>gi|452814|emb|CAA54072.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 1133 bits (2931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/1059 (52%), Positives = 740/1059 (69%), Gaps = 17/1059 (1%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG SFDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+ NT +
Sbjct: 337 VVQDDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEF Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFFMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSD 516
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY A ALGD VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK--- 594
KDDG++M+PRSSF+ FLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D
Sbjct: 577 KDDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
++ D+ +GM+E+ AV EMVRLIETATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A+GK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DAMGKSLVRELIYKEYKETVDRLLSCALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I+NPLSG+ F+ ++E +L +QK+LL TS C++Q+ KI+ D D+ SI
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG LE EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>gi|240119399|dbj|BAH79248.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1132 bits (2927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1059 (52%), Positives = 742/1059 (70%), Gaps = 18/1059 (1%)
Query: 3 SSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQ 59
S RP Q+ + S + I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 48 SLRPQQNQPQSHTVSMS-KAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLK--TTTYGSS 104
Query: 60 QPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD 119
P ++ TAYL IQ+G IQPFGC++A+DE TF++I YSENA E+L ++ +VPS+
Sbjct: 105 VP--EQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEK 162
Query: 120 HPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
+L +G+D++++F S+ L++A ++++LNP+ +H K +GKPFYAI+HR+ ++
Sbjct: 163 PEILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVV 222
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+RLQSLP G ++ LCDT+++ V +LTGYDRV
Sbjct: 223 IDLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRV 282
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 283 MVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVL 342
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK 359
++QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G N +
Sbjct: 343 LVQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNS 402
Query: 360 -RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
+LWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLCD
Sbjct: 403 MKLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCD 462
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
ML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P + Q+ DIV WL H DS
Sbjct: 463 MLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADS 522
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL +AGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++K
Sbjct: 523 TGLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDK 582
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++K++
Sbjct: 583 DDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE-SEAAMNSKAVDG 641
Query: 599 KL--C-DLKIE-GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
+ C D+ E G EL AV EMVRLIETATVPI AVD G +NGWN KIAELTGLSV+
Sbjct: 642 AVQPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVE 701
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
+A+GK ++ L+ + +TV ++L AL+G E++N++ ++KT ++ + +IVNAC+
Sbjct: 702 EAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACS 761
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF +DE C E
Sbjct: 762 SKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPLIPPIFAADENTICLE 821
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN A+ KLTG R EVI K+L+ EVFG CCRLK +A IVL+ A+ GQ+ EK
Sbjct: 822 WNAALEKLTGVSRGEVIGKMLVGEVFGN---CCRLKGPDALTRFMIVLHNAIGGQETEKF 878
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF RNGK+ + LL NK++ +G V G FCFLQ+ S ELQQAL VQR + +
Sbjct: 879 PFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKA 938
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I++PLSG+ F+ ++E T L +QK+ L TS C++Q+ +I+ D DL+SI
Sbjct: 939 KELAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIE 998
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG +L EF L ++ A +SQ M +G++++ + E+I S +YGD R+QQ+LA
Sbjct: 999 DGSFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAVYGDQTRIQQLLA 1058
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL I + P+ + + S Q G + E R
Sbjct: 1059 EFLLSIIRYAPSQEWVEIHLSQVSKQTGDGLRAIRTEFR 1097
>gi|6502525|gb|AAF14344.1|AF069305_1 phytochrome B [Pisum sativum]
Length = 1121
Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/1040 (53%), Positives = 740/1040 (71%), Gaps = 16/1040 (1%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLI 80
+ IAQ T DA LHA FE SG SFDY+ S+RV TA + P ++ TAYL IQ+G I
Sbjct: 18 KAIAQYTEDAXLHAVFEKSGDSFDYAQSIRV--TAATESVP--EQQITAYLAKIQRGGFI 73
Query: 81 QPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLG----IGSDIKTIFTAP 136
QPFG ++A+DE +F+V+AYSENA ++L + +VPS+ D +G D++++F+A
Sbjct: 74 QPFGSMIAVDETSFRVLAYSENARDMLGIAPQSVPSMEDDSSSSSFFSLGVDVRSLFSAS 133
Query: 137 SASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
S+ L+KA E+SL+NPI +H +++GKPFY I+HR+ ++ID EP + + ++ AG
Sbjct: 134 SSVLLEKAFSAREISLMNPIWIHSRSTGKPFYGILHRIDIGVVIDLEPARSEDPALSIAG 193
Query: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEI 256
A+QS KLA +AI++LQ+LP G ++ LCD +++ V ELTGYDRVM YKFHED+HGEVV+E
Sbjct: 194 AVQSQKLAVRAISQLQALPGGDVKLLCDAVVESVRELTGYDRVMVYKFHEDEHGEVVAES 253
Query: 257 TKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGST 316
+ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V QDE L + L GST
Sbjct: 254 KRVDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCLVGST 313
Query: 317 LRAPHSCHLQYMENMNSIASLVMAVVVN--DEEEEGDNTLPQKRKRLWGLVVCHNTTPRF 374
LRAPH CH QYM NM SIASL MAV++N DE+ G + RLWGLVVCH+T+ R
Sbjct: 314 LRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGGGIGGAARGSMRLWGLVVCHHTSARC 373
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPN 434
+PFPLRYACEFL Q F + +N EL+L Q LEK +L+TQTLLCDML+RD+ GIVTQSP+
Sbjct: 374 IPFPLRYACEFLMQAFGLQLNMELQLAVQSLEKRVLKTQTLLCDMLLRDSHTGIVTQSPS 433
Query: 435 IMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGA 494
IMDLVKCDGAAL Y+ LGVTP + Q+ DI+ WL +H DSTGLS DSL DAGY GA
Sbjct: 434 IMDLVKCDGAALYYQGNYHPLGVTPTESQIRDIIDWLLAFHSDSTGLSTDSLADAGYPGA 493
Query: 495 LALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFL 554
+LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDDG+KMHPRSSFKAFL
Sbjct: 494 ASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQKMHPRSSFKAFL 553
Query: 555 EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAV 614
EVVK RS+ W + EMDAIHSLQLILR++FK+ D +H+ + +L+++G+ EL +V
Sbjct: 554 EVVKIRSMQWDNAEMDAIHSLQLILRDSFKEAENND-SKAVVHTHMAELELQGVDELSSV 612
Query: 615 TSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL-TLVEDSSIDTV 673
EMVRLIETAT PI AVDVDG +NGWN K++ELTGL V++A+GK + LV S +TV
Sbjct: 613 AREMVRLIETATAPIFAVDVDGRINGWNAKVSELTGLLVEEAMGKSLVHDLVYKESRETV 672
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
++L AL+G+E++N++ ++KT G + + ++VNAC+S+D +N+VGVCFV QDIT
Sbjct: 673 DKLLSHALKGEEDKNVEIKMKTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVGQDITG 732
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
QK VMDKF I+GDYKAIV +PNPLIPPIF SD+ C EWN AM KL+GW R +VI KL
Sbjct: 733 QKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNAMEKLSGWSRADVIGKL 792
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
L+ EVFG+ C+LK +A IVL+ A+ G D +K P F R+GKY L NK
Sbjct: 793 LVGEVFGS---FCQLKGSDAMTKFMIVLHNALGGHDTDKFPLSFLDRHGKYVHTFLTANK 849
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
+++ +G + G FCFLQ+ + ELQQAL VQR + ++L R+K LAY ++++NPLSGI F+
Sbjct: 850 RVNMDGQIIGAFCFLQIVNPELQQALTVQRQQDSSSLARMKELAYICQEVKNPLSGIRFT 909
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVAS 973
++E T L EQK+LL TS C++Q+ KI+ D L+SI DG L+LE EF L V+ A
Sbjct: 910 NSLLESTCLTDEQKQLLETSVACEKQMLKIVRDIALESIEDGSLELEKQEFLLENVINAV 969
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN-GGQLMVS 1032
+SQVM+ + ++++ + E+I + +YGD +R+QQVLADFL + + P+ G + +
Sbjct: 970 VSQVMLLLRDRKLQLIRDIPEEIKALAVYGDQLRIQQVLADFLMNVVRYAPSPDGWVEIH 1029
Query: 1033 SSLTKDQLGQSVHLAYLELR 1052
Q+ + + L + E R
Sbjct: 1030 VFPRIKQISEGLTLLHAEFR 1049
>gi|240119391|dbj|BAH79244.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1130 bits (2924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1059 (52%), Positives = 741/1059 (69%), Gaps = 18/1059 (1%)
Query: 3 SSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQ 59
S RP Q+ + S + I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 48 SLRPQQNQPQSHTVSMS-KAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLK--TTTYGSS 104
Query: 60 QPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD 119
P ++ TAYL IQ+G IQPFGC++A+DE TF++I YSENA E+L ++ +VPS+
Sbjct: 105 VP--EQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEK 162
Query: 120 HPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
+L +G+D++++F S+ L++A ++++LNP+ +H K +GKPFYAI+HR+ ++
Sbjct: 163 PEILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVV 222
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+RLQSLP G ++ LCDT+++ V +LTGYDRV
Sbjct: 223 IDLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRV 282
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 283 MVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVL 342
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK 359
++QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G N +
Sbjct: 343 LVQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNS 402
Query: 360 -RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
+LWGLVVCH+TT R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLCD
Sbjct: 403 MKLWGLVVCHHTTSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCD 462
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
ML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P + Q+ DIV WL H DS
Sbjct: 463 MLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADS 522
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL +AGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++K
Sbjct: 523 TGLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDK 582
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++K++
Sbjct: 583 DDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE-SEAAMNSKAVDG 641
Query: 599 KL--C-DLKIE-GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
+ C D+ E G EL AV EMVRLIETATVPI AVD G +NGWN KIAELTGLSV+
Sbjct: 642 AVQPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVE 701
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
+A+GK ++ L+ + +TV ++L AL+G E++N++ ++KT ++ + +IVNAC+
Sbjct: 702 EAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACS 761
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF +DE C E
Sbjct: 762 SKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPLIPPIFAADENTICLE 821
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN A+ KLTG R EVI K+L+ EVFG CCRLK +A IVL+ A+ GQ+ EK
Sbjct: 822 WNAALEKLTGVSRGEVIGKMLVGEVFGN---CCRLKGPDALTRFMIVLHNAIGGQETEKF 878
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF RNGK+ + LL NK++ +G V G FCFLQ+ S ELQQAL VQR + +
Sbjct: 879 PFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKA 938
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I++PLSG+ F+ ++E T L +QK+ L TS C++Q+ +I+ D DL+SI
Sbjct: 939 KELAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIE 998
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG +L EF L ++ A +SQ M +G++++ + E+I S +YGD R+QQ+LA
Sbjct: 999 DGSFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAVYGDQTRIQQLLA 1058
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL I + P+ + + S Q + E R
Sbjct: 1059 EFLLSIIRYAPSQEWVEIHLSQVSKQTADGLRAIRTEFR 1097
>gi|124359940|gb|ABN07956.1| GAF; Heavy metal sensor kinase [Medicago truncatula]
Length = 1152
Score = 1130 bits (2923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/1013 (53%), Positives = 731/1013 (72%), Gaps = 14/1013 (1%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLI 80
+ IAQ T DA+LHA FE SG SFDYS S+R+++ A P ++ TAYL IQ+G I
Sbjct: 46 KAIAQYTEDARLHAVFEQSGDSFDYSQSIRLTTAAHSQSVP--EQQITAYLAKIQRGGFI 103
Query: 81 QPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD-----HPVLGIGSDIKTIFTA 135
QPFG ++A+DE +F+V+AYSENA ++L + +VPS+ D IG+D++++FT
Sbjct: 104 QPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIGTDVRSLFTH 163
Query: 136 PSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAA 195
S L+KA E+SL+NPI +H +++GKPFY I+HR+ ++ID EP + + ++ A
Sbjct: 164 SSGVLLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPALSIA 223
Query: 196 GALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSE 255
GA+QS KLA +AI++LQSLP G ++ LCD +++ V ELTGYDRVM YKFHED+HGEVV+E
Sbjct: 224 GAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGEVVAE 283
Query: 256 ITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGS 315
+ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V QDE L + L GS
Sbjct: 284 SKRIDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCLVGS 343
Query: 316 TLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK--RLWGLVVCHNTTPR 373
TLRAPH CH QYM NM SIASL MAV++N +E+G R RLWGLVVCH+T+ R
Sbjct: 344 TLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNSMRLWGLVVCHHTSAR 403
Query: 374 FVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSP 433
+PFPLRYACEFL Q F + +N EL+L Q LEK +LRTQTLLCDML+RD+P GIVTQSP
Sbjct: 404 CIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSP 463
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
+IMDLVKC+GAAL Y+ + LGVTP + Q+ DI+ WL +H DSTGLS DSL DAGY G
Sbjct: 464 SIMDLVKCNGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDSTGLSTDSLADAGYPG 523
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A +LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDDG++MHPRSSFKAF
Sbjct: 524 AASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 583
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK+RS+ W + EMDAIHSLQLILR++FK+ D +H+ + +L+++G+ EL +
Sbjct: 584 LEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENND-SKAVVHTHMAELELQGVDELSS 642
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL-TLVEDSSIDT 672
V EMVRLIETAT PI AVDV+G +NGWN K++ELTGL V+ A+GK L LV S +T
Sbjct: 643 VAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGKSLLHDLVYKESQET 702
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
V ++L AL+G+E++N++ +++T G + + ++VNAC+S+D +N+VGVCFV QD+T
Sbjct: 703 VDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVGQDVT 762
Query: 733 PQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDK 792
QK VMDKF I+GDYKAIV +PN LIPPIF SD+ C EWN AM KL+GW R +VI K
Sbjct: 763 GQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCLEWNNAMEKLSGWSRTDVIGK 822
Query: 793 LLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVN 852
LL+ EVFG+ C+LK +A IVL+ A+ GQD +K PF F R+GK+ + L N
Sbjct: 823 LLVGEVFGS---FCQLKGSDAMTKFMIVLHNALGGQDTDKFPFSFVDRHGKFVQTFLTAN 879
Query: 853 KKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K+++ +G + G FCFLQ+ S ELQQAL VQR + + R+K LAY ++++NPLSGI F
Sbjct: 880 KRVNMDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKELAYICQEVKNPLSGIRF 939
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVA 972
+ ++E T L EQK+LL TS C++Q+ KI+ D DLD I +G L+LE EF L V+ A
Sbjct: 940 TNSLLESTCLTDEQKQLLETSVACEKQMLKIIRDIDLDIIDNGSLELEKREFLLENVINA 999
Query: 973 SISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+SQVM+ + ++++ + E+I + +YGD +R+QQVLADFL + + P+
Sbjct: 1000 VVSQVMLLLRERNLQLIRDIPEEIKALAVYGDQLRIQQVLADFLMNVVRYAPS 1052
>gi|327242615|gb|AEA41043.1| phytochrome B [Amphicarpaea edgeworthii]
Length = 1105
Score = 1129 bits (2921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/1046 (52%), Positives = 743/1046 (71%), Gaps = 26/1046 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T DA+LHA FE SG SFDYS S+R++S +QQ TAYL IQ+
Sbjct: 2 SKAMAQYTEDARLHAVFEQSGESGKSFDYSQSIRITSETVPEQQ------ITAYLLKIQR 55
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVL---GIGSDIKTIF 133
G IQPFG ++A+DE++F+++AYS+NA ++L ++ +VPS+ D L G+G+D++T+F
Sbjct: 56 GGFIQPFGSMIAVDERSFRIMAYSDNARDMLGIIPQSVPSMDDDDKLHAFGLGTDVRTLF 115
Query: 134 TAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMT 193
T S L+KA E+SL+NPI +H + SG+PFY I HRV ++ID EP + + ++
Sbjct: 116 THSSGVLLEKAFSAREISLMNPIWIHSRISGRPFYGIFHRVDVGIVIDLEPARTEDPALS 175
Query: 194 AAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVV 253
AGA+QS KLA +AI++LQSLP G+++ LCDT+++ V ELTGYDRVM YKFHED+HGEVV
Sbjct: 176 IAGAVQSQKLAVRAISKLQSLPGGNVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVV 235
Query: 254 SEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLC 313
+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V+QDE L L L
Sbjct: 236 AESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASSVRVMQDEALLQPLCLV 295
Query: 314 GSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPR 373
GSTLRAPH CH QYM NM SIASLVMAV++N +E+G + + RLWGLVVCH+T+ R
Sbjct: 296 GSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDEDGIGS--RSSMRLWGLVVCHHTSAR 353
Query: 374 FVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSP 433
+PFPLRYACEFL Q F + +N EL+L Q +EK +LRTQTLLCDML+RD+P GIVTQSP
Sbjct: 354 CIPFPLRYACEFLMQAFGLQLNMELQLAVQSMEKRVLRTQTLLCDMLLRDSPTGIVTQSP 413
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
+IM+LVKCDGAAL Y+ LGVTP + Q+ DI+ WL +H DSTGLS DSL DAGY G
Sbjct: 414 SIMNLVKCDGAALYYRGNYCPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLADAGYPG 473
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A LGD VCGMA I+ KD +FWFRS T E++WGGAKH P++KDDG++MHPRSSFKAF
Sbjct: 474 AALLGDAVCGMAVAYITEKDFLFWFRSHTGKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 533
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK+RS+PW++ EMDAIHSLQLILR++FKD D+K + + L++ G+ EL +
Sbjct: 534 LEVVKSRSMPWENAEMDAIHSLQLILRDSFKDAE--HRDSKVVVPCVPKLELRGVDELSS 591
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDT 672
V EMVRLIETAT PI AVDVDG +NGWN K++ELTGL+V++A+GK + LV S +T
Sbjct: 592 VAREMVRLIETATAPIFAVDVDGHINGWNAKVSELTGLAVEEAMGKSLIRDLVFKESEET 651
Query: 673 VKRMLYLALQGQEEQNIQF----EIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
V R+L AL+G + F ++T G + + + ++VNAC+S+D +N+VGVCFV
Sbjct: 652 VDRLLSRALKGILSNTLAFWSIHRLRTFGPEHQNKAVFVVVNACSSKDYTNNIVGVCFVG 711
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF SD+ C EWN AM KLTGW R +
Sbjct: 712 QDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNTAMEKLTGWGRSD 771
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECL 848
VI K+L+ EVFG+ CC+LK ++ IVL+ A+ GQ+ +K PF F R+GKY +
Sbjct: 772 VIGKMLVREVFGS---CCQLKGSDSMTKFMIVLHNALGGQETDKFPFSFLDRHGKYIQTF 828
Query: 849 LCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLS 908
L NK+++ G + G FCFLQ+ S ELQQAL QR E+ + R+K LAY + I+NPLS
Sbjct: 829 LTANKRINMNGQIIGAFCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGIKNPLS 888
Query: 909 GIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY-LDLEMVEFTLN 967
GI F+ ++E T L EQK+ L TS+ C++Q+ +I+ D DL+SI D Y L+LE EF L
Sbjct: 889 GIRFTNSLLEDTGLTDEQKQFLETSSACEKQMSEIIHDIDLESIEDRYSLELEKGEFLLG 948
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN-G 1026
V+ A +SQV++ + ++++ + E+I + +YGD +R+QQVL+DFL + + P+
Sbjct: 949 NVINAVVSQVLLLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLSDFLLNIVRYAPSPD 1008
Query: 1027 GQLMVSSSLTKDQLGQSVHLAYLELR 1052
G + + Q+ + L + E R
Sbjct: 1009 GWVEIHVRPRIKQISDGLTLLHAEFR 1034
>gi|240119393|dbj|BAH79245.1| phytochrome B [Cardamine nipponica]
gi|240119395|dbj|BAH79246.1| phytochrome B [Cardamine nipponica]
gi|240119397|dbj|BAH79247.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1129 bits (2921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/1059 (52%), Positives = 741/1059 (69%), Gaps = 18/1059 (1%)
Query: 3 SSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQ 59
S RP Q+ + S + I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 48 SLRPQQNQPQSHTVSMS-KAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLK--TTTYGSS 104
Query: 60 QPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD 119
P ++ TAYL IQ+G IQPFGC++A+DE TF++I YSENA E+L ++ +VPS+
Sbjct: 105 VP--EQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEK 162
Query: 120 HPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
+L +G+D++++F S+ L++A ++++LNP+ +H K +GKPFYAI+HR+ ++
Sbjct: 163 PEILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVV 222
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+RLQSLP G ++ LCDT+++ V +LTGYDRV
Sbjct: 223 IDLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRV 282
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 283 MVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVL 342
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK 359
++QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G N +
Sbjct: 343 LVQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNS 402
Query: 360 -RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
+LWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLCD
Sbjct: 403 MKLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCD 462
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
ML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P + Q+ DIV WL H DS
Sbjct: 463 MLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADS 522
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL +AGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++K
Sbjct: 523 TGLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDK 582
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++K++
Sbjct: 583 DDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE-SEAAMNSKAVDG 641
Query: 599 KL--C-DLKIE-GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
+ C D+ E G EL AV EMVRLIETATVPI AVD G +NGWN KIAELTGLSV+
Sbjct: 642 AVQPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVE 701
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
+A+GK ++ L+ + +TV ++L AL+G E++N++ ++KT ++ + +IVNAC+
Sbjct: 702 EAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACS 761
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF +DE C E
Sbjct: 762 SKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPLIPPIFAADENTICLE 821
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN A+ KLTG R EVI K+L+ EVFG CCRLK +A IVL+ A+ GQ+ EK
Sbjct: 822 WNAALEKLTGVSRGEVIGKMLVGEVFGN---CCRLKGPDALTRFMIVLHNAIGGQETEKF 878
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF RNGK+ + LL NK++ +G V G FCFLQ+ S ELQQAL VQR + +
Sbjct: 879 PFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKA 938
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I++PLSG+ F+ ++E T L +QK+ L TS C++Q+ +I+ D DL+SI
Sbjct: 939 KELAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIE 998
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG +L EF L ++ A +SQ M +G++++ + E+I S +YGD R+QQ+LA
Sbjct: 999 DGSFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAVYGDQTRIQQLLA 1058
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL I + P+ + + S Q + E R
Sbjct: 1059 EFLLSIIRYAPSQEWVEIHLSQVSKQTADGLRAIRTEFR 1097
>gi|357448917|ref|XP_003594734.1| Phytochrome b1 [Medicago truncatula]
gi|355483782|gb|AES64985.1| Phytochrome b1 [Medicago truncatula]
Length = 1198
Score = 1128 bits (2918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/1013 (53%), Positives = 731/1013 (72%), Gaps = 14/1013 (1%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLI 80
+ IAQ T DA+LHA FE SG SFDYS S+R+++ A P ++ TAYL IQ+G I
Sbjct: 46 KAIAQYTEDARLHAVFEQSGDSFDYSQSIRLTTAAHSQSVP--EQQITAYLAKIQRGGFI 103
Query: 81 QPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD-----HPVLGIGSDIKTIFTA 135
QPFG ++A+DE +F+V+AYSENA ++L + +VPS+ D IG+D++++FT
Sbjct: 104 QPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIGTDVRSLFTH 163
Query: 136 PSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAA 195
S L+KA E+SL+NPI +H +++GKPFY I+HR+ ++ID EP + + ++ A
Sbjct: 164 SSGVLLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPALSIA 223
Query: 196 GALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSE 255
GA+QS KLA +AI++LQSLP G ++ LCD +++ V ELTGYDRVM YKFHED+HGEVV+E
Sbjct: 224 GAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGEVVAE 283
Query: 256 ITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGS 315
+ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V QDE L + L GS
Sbjct: 284 SKRIDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCLVGS 343
Query: 316 TLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK--RLWGLVVCHNTTPR 373
TLRAPH CH QYM NM SIASL MAV++N +E+G R RLWGLVVCH+T+ R
Sbjct: 344 TLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNSMRLWGLVVCHHTSAR 403
Query: 374 FVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSP 433
+PFPLRYACEFL Q F + +N EL+L Q LEK +LRTQTLLCDML+RD+P GIVTQSP
Sbjct: 404 CIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSP 463
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
+IMDLVKC+GAAL Y+ + LGVTP + Q+ DI+ WL +H DSTGLS DSL DAGY G
Sbjct: 464 SIMDLVKCNGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDSTGLSTDSLADAGYPG 523
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A +LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDDG++MHPRSSFKAF
Sbjct: 524 AASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 583
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK+RS+ W + EMDAIHSLQLILR++FK+ D +H+ + +L+++G+ EL +
Sbjct: 584 LEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENND-SKAVVHTHMAELELQGVDELSS 642
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL-TLVEDSSIDT 672
V EMVRLIETAT PI AVDV+G +NGWN K++ELTGL V+ A+GK L LV S +T
Sbjct: 643 VAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGKSLLHDLVYKESQET 702
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
V ++L AL+G+E++N++ +++T G + + ++VNAC+S+D +N+VGVCFV QD+T
Sbjct: 703 VDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVGQDVT 762
Query: 733 PQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDK 792
QK VMDKF I+GDYKAIV +PN LIPPIF SD+ C EWN AM KL+GW R +VI K
Sbjct: 763 GQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCLEWNNAMEKLSGWSRTDVIGK 822
Query: 793 LLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVN 852
LL+ EVFG+ C+LK +A IVL+ A+ GQD +K PF F R+GK+ + L N
Sbjct: 823 LLVGEVFGS---FCQLKGSDAMTKFMIVLHNALGGQDTDKFPFSFVDRHGKFVQTFLTAN 879
Query: 853 KKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K+++ +G + G FCFLQ+ S ELQQAL VQR + + R+K LAY ++++NPLSGI F
Sbjct: 880 KRVNMDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKELAYICQEVKNPLSGIRF 939
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVA 972
+ ++E T L EQK+LL TS C++Q+ KI+ D DLD I +G L+LE EF L V+ A
Sbjct: 940 TNSLLESTCLTDEQKQLLETSVACEKQMLKIIRDIDLDIIDNGSLELEKREFLLENVINA 999
Query: 973 SISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+SQVM+ + ++++ + E+I + +YGD +R+QQVLADFL + + P+
Sbjct: 1000 VVSQVMLLLRERNLQLIRDIPEEIKALAVYGDQLRIQQVLADFLMNVVRYAPS 1052
>gi|240119403|dbj|BAH79250.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1128 bits (2917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/1059 (52%), Positives = 740/1059 (69%), Gaps = 18/1059 (1%)
Query: 3 SSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQ 59
S RP Q+ + S + I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 48 SLRPQQNQPQSHTVSMS-KAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLK--TTTYGSS 104
Query: 60 QPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD 119
P ++ TAYL IQ+G IQPFGC++A+DE TF++I YSENA E+L ++ +VPS+
Sbjct: 105 VP--EQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEK 162
Query: 120 HPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
+L +G+D++++F S+ L++A ++++LNP+ +H K +GKPFYAI+HR+ ++
Sbjct: 163 PEILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVV 222
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+RLQSLP G ++ LCDT+++ V +LTGYDRV
Sbjct: 223 IDLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRV 282
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 283 MVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVL 342
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK 359
++QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G N +
Sbjct: 343 LVQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNS 402
Query: 360 -RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
+LWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLCD
Sbjct: 403 MKLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCD 462
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
ML+RD+P GIVTQSP+IMD VKCDGAA LY K + LGV P + Q+ DIV WL H DS
Sbjct: 463 MLLRDSPAGIVTQSPSIMDFVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADS 522
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL +AGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++K
Sbjct: 523 TGLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDK 582
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++K++
Sbjct: 583 DDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE-SEAAMNSKAVDG 641
Query: 599 KL--C-DLKIE-GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
+ C D+ E G EL AV EMVRLIETATVPI AVD G +NGWN KIAELTGLSV+
Sbjct: 642 AVQPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVE 701
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
+A+GK ++ L+ + +TV ++L AL+G E++N++ ++KT ++ + +IVNAC+
Sbjct: 702 EAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACS 761
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF +DE C E
Sbjct: 762 SKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPLIPPIFAADENTICLE 821
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN A+ KLTG R EVI K+L+ EVFG CCRLK +A IVL+ A+ GQ+ EK
Sbjct: 822 WNAALEKLTGVSRGEVIGKMLVGEVFGN---CCRLKGPDALTRFMIVLHNAIGGQETEKF 878
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF RNGK+ + LL NK++ +G V G FCFLQ+ S ELQQAL VQR + +
Sbjct: 879 PFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKA 938
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I++PLSG+ F+ ++E T L +QK+ L TS C++Q+ +I+ D DL+SI
Sbjct: 939 KELAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIE 998
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG +L EF L ++ A +SQ M +G++++ + E+I S +YGD R+QQ+LA
Sbjct: 999 DGSFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAVYGDQTRIQQLLA 1058
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL I + P+ + + S Q + E R
Sbjct: 1059 EFLLSIIRYAPSQEWVEIHLSQVSKQTADGLRAIRTEFR 1097
>gi|240119401|dbj|BAH79249.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/1059 (52%), Positives = 741/1059 (69%), Gaps = 18/1059 (1%)
Query: 3 SSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQ 59
S RP Q+ + S + I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 48 SLRPQQNQPQSHTVSMS-KAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLK--TTTYGSS 104
Query: 60 QPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD 119
P ++ TAYL IQ+G IQPFGC++A+DE TF++I YSENA E+L ++ +VPS+
Sbjct: 105 VP--EQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEK 162
Query: 120 HPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
+L +G+D++++F S+ L++A ++++LNP+ +H K +GKPFYAI+HR+ ++
Sbjct: 163 PEILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVV 222
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+RLQSLP G ++ LCDT+++ V +LTGYDRV
Sbjct: 223 IDLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRV 282
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 283 MVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVL 342
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK 359
++QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G N +
Sbjct: 343 LVQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNS 402
Query: 360 -RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
+LWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLCD
Sbjct: 403 MKLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCD 462
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
ML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P + Q+ DIV WL H DS
Sbjct: 463 MLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADS 522
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL +AGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++K
Sbjct: 523 TGLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDK 582
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++K++
Sbjct: 583 DDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE-SEAAMNSKAVDG 641
Query: 599 KL--C-DLKIE-GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
+ C D+ E G EL AV EMVRLIETATVPI AVD G +NGWN KIAELTGLSV+
Sbjct: 642 AVQPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVE 701
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
+A+GK ++ L+ + +TV ++L AL+G E++N++ ++KT ++ + +IVNAC+
Sbjct: 702 EAMGKSLVSDLIYKENEETVNKLLSRALRGDEDKNVEVKLKTFSPELQGKAVFMIVNACS 761
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF +D+ C E
Sbjct: 762 SKDYLNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHNPNPLIPPIFAADDNTICLE 821
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN A+ KLTG R EVI K+L+ EVFG CCRLK +A IVL+ A+ GQ+ EK
Sbjct: 822 WNAALEKLTGVSRGEVIGKMLVGEVFGN---CCRLKGPDALTRFMIVLHNAIGGQETEKF 878
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF RNGK+ + LL NK++ +G V G FCFLQ+ S ELQQAL VQR + +
Sbjct: 879 PFPFFDRNGKFVQALLTANKRVSLDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKA 938
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I++PLSG+ F+ ++E T L +QK+ L TS C++Q+ +I+ D DL+SI
Sbjct: 939 KELAYICQVIKSPLSGLRFANSLLEATNLNEDQKQFLETSVSCEKQISRIVGDMDLESIE 998
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG +L EF L ++ A +SQ M +G++++ + E+I S +YGD R+QQ+LA
Sbjct: 999 DGSFELVRAEFFLGSIINAIVSQAMFLLRERGLQLIRDIPEEIKSTAVYGDQTRIQQLLA 1058
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL I + P+ + + S Q + E R
Sbjct: 1059 EFLLSIIRYAPSQEWVEIHLSQVSKQTADGLRAIRTEFR 1097
>gi|5757903|gb|AAD50631.1|AF122901_1 phytochrome B2 [Solanum lycopersicum]
Length = 1121
Score = 1124 bits (2908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1059 (52%), Positives = 759/1059 (71%), Gaps = 30/1059 (2%)
Query: 5 RPAQSSSNTGKSRHSA--RVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQ 59
+P S +G S +A + +AQ T DA+LHA FE SG S FDYS SVR S+ + +
Sbjct: 16 QPKNQSQFSGTSNTNALSKAVAQYTTDARLHAAFEQSGESGKNFDYSQSVRNSTESVTEH 75
Query: 60 QPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD 119
Q TAYL+ +Q+G IQPFGC +A++E +F VIAYSENA E+L ++ +VPS+
Sbjct: 76 Q------ITAYLNKMQRGGHIQPFGCTIAVEEASFCVIAYSENACEMLDIMPQSVPSLEK 129
Query: 120 HPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
+ +L IG+D++T+F++ S+ L+ A G E++LLNPI VH K SGKPFYAI+HR+ ++
Sbjct: 130 NEILKIGTDVRTLFSSSSSGLLEGAFGAREITLLNPIWVHSKNSGKPFYAILHRIDVGIV 189
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLP G ++ LCDT+++ V ELTGYDRV
Sbjct: 190 IDLEPARTEDPALSIAGAVQSQKLAVRAISLLQSLPGGDIDLLCDTVVKSVRELTGYDRV 249
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFH+D+HGEVV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 250 MVYKFHDDEHGEVVAESRRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCTAIPVR 309
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE---GDNTLPQ 356
V+QDE L L L GSTLRAPH CH QYM NM ++ASL +AVV+N ++E G N +
Sbjct: 310 VIQDESLMQPLCLVGSTLRAPHGCHPQYMVNMGNVASLTLAVVINGNDDEVVGGRNAM-- 367
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
RLWGLVV H+++ RF+PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQT+L
Sbjct: 368 ---RLWGLVVGHHSSARFIPFPLRYACEFLMQAFGLQLNMELQLASQLAEKRVLRTQTVL 424
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDML+RD+P GIVTQ+P+I+DLVKCDGAAL Y+ + + LG+TP Q+ IV WL H+
Sbjct: 425 CDMLLRDSPTGIVTQNPSIVDLVKCDGAALYYQGRYYPLGITPTAAQIKGIVEWLLTCHV 484
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL DAGY A +LG VCGMA ++ K +FWFRS TASE++WGGAKH P+
Sbjct: 485 DSTGLSTDSLADAGYPEAASLGAAVCGMAVAYVTSKYFLFWFRSHTASEIKWGGAKHHPE 544
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD +KMHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR++FKD ++KSI
Sbjct: 545 DKDDWQKMHPRSSFKAFLEVVKNRSLPWENAEMDAIHSLQLILRDSFKDAS----NSKSI 600
Query: 597 -HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
+L + ++GM EL +V EMVRL+ETAT PI AVDV+G +N WN K+AELT LSV++
Sbjct: 601 VRVQLREEGLQGMDELRSVAREMVRLVETATAPIFAVDVEGRINAWNAKVAELTELSVEE 660
Query: 656 AIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
AIGK + LV + S T + +L AL+G+E++NI+ +++T G++ + + VNAC++
Sbjct: 661 AIGKSLVHDLVHEESQTTAQNLLRKALRGEEDKNIEIKLRTFGAEQLKKTVFVEVNACSN 720
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+D +N+VGV F+ QDIT QK V+DKF RI+GDYKAI+ +PNPLIPPIF SDE C EW
Sbjct: 721 KDYTNNIVGVSFIGQDITAQKVVLDKFVRIQGDYKAIMHSPNPLIPPIFVSDENTCCFEW 780
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM KL+GW +EE+I K+L+ E+FGT CRLK + N I+L+KA+ GQ+ +K P
Sbjct: 781 NTAMEKLSGWNKEEIIGKMLVGEIFGT---FCRLKGPDDMTNFMIMLHKAIGGQEIDKFP 837
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
F F RNGK+ + LL NK+++ +G + G FCFLQ+AS ELQ+ L +QR E+T+ +K
Sbjct: 838 FSFSDRNGKFVQALLTANKRVNVDGQIIGAFCFLQIASPELQKTL-MQRQQEKTSNIHMK 896
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY R+++NPL+GI F+ ++E TEL QK+ L TSA C+RQ+ KI+ D DLD+I D
Sbjct: 897 ELAYICRELKNPLNGIRFTNSLLEATELTENQKQFLETSAACERQMSKIIRDIDLDNIED 956
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L+LE EF L V+ A +SQVM+ +G++++ + ++I + +YGD +R+QQV AD
Sbjct: 957 GSLELEKGEFFLASVIDAVVSQVMLLLRERGVQLIRDIPDEIKTLRVYGDQVRIQQVFAD 1016
Query: 1015 FLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
FL I ++ P G + V + Q+ V + ++E R
Sbjct: 1017 FLQIMASYAPPREGWVEVHLRPSIKQISDGVTIVHIEFR 1055
>gi|33333478|gb|AAQ11872.1| phytochrome B [Stellaria longipes]
Length = 1128
Score = 1124 bits (2906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/1045 (52%), Positives = 742/1045 (71%), Gaps = 24/1045 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
+R IAQ TIDA+LHA FE SG SFDYS SV+ ++A + ++ TAYL IQ+
Sbjct: 24 SRAIAQYTIDARLHAVFEQSGESGKSFDYSQSVKTYTSA----ESVPEQQITAYLSKIQR 79
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNH----AVPSVG--DHPVLGIGSDIK 130
G LIQPFGC+LA+D+ T+++IAYS+N+ ELL + AVPS+ ++ +G+DI+
Sbjct: 80 GGLIQPFGCMLAIDDLTYRIIAYSQNSVELLGFITTTTTTAVPSLEAVQQRIIAVGTDIR 139
Query: 131 TIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEV 190
++F + S L+KA E++LLNP+ +H K +GKPFYAI+HR+ ++ID EP + +
Sbjct: 140 SLFMSSSCVLLEKAFSAREITLLNPVWIHSKANGKPFYAILHRIDVGIVIDLEPARTEDP 199
Query: 191 PMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHG 250
++ AGA+QS KLA +AI++LQSLP G ++ LCDT+++ V +L YDRVM YKFHED+HG
Sbjct: 200 ALSIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRQLAAYDRVMVYKFHEDEHG 259
Query: 251 EVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDL 310
EVV+E ++ LEPYLGLHYPATDIPQA+RFLF +N+VRMIVDC A V V+QDE+L L
Sbjct: 260 EVVAESKRADLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDCHADSVSVVQDERLRQPL 319
Query: 311 TLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNT 370
L GSTLRAPH CH QYM NM SIASLVMAV++N ++EG + RLWGLVVCH+T
Sbjct: 320 CLVGSTLRAPHGCHSQYMANMGSIASLVMAVIINGNDDEGST---RNAMRLWGLVVCHHT 376
Query: 371 TPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVT 430
+PR +PFPLRYACEFL Q F + +N EL+L Q+LEK +LRTQTLLCDM++R++P GIVT
Sbjct: 377 SPRSIPFPLRYACEFLMQAFGLQLNMELQLSAQVLEKRVLRTQTLLCDMILRESPTGIVT 436
Query: 431 QSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAG 490
QSP+IMDLVKCDGAALL+ K + LGVTP + QL DIV WL H DSTGLS DSL DAG
Sbjct: 437 QSPSIMDLVKCDGAALLFCGKYYPLGVTPTELQLKDIVQWLLSNHGDSTGLSTDSLADAG 496
Query: 491 YLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSF 550
Y GALAL D VCGMA I+ D +FWFRS A E++WGGAKH P++KDD ++M+PRSSF
Sbjct: 497 YPGALALADAVCGMAVAFITRSDFLFWFRSHPAKEIKWGGAKHHPEDKDDVQRMNPRSSF 556
Query: 551 KAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI-HSKLCDLKIEGMK 609
KAFLEVVK+RSLPW++ EMDAIHSLQLILR++FKD T +K+I H + D+ ++G+
Sbjct: 557 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDEET--THSKAIVHDQAGDVAMQGID 614
Query: 610 ELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL-TLVEDS 668
EL +V EMVRLIETA PI AVD DG +NGWN K +EL GLSV++A+GK + LV +
Sbjct: 615 ELSSVAKEMVRLIETAMAPIFAVDADGCINGWNAKASELIGLSVEEAMGKSLVHDLVCED 674
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S + + +L ALQG E++N++ ++K GS+ + + ++VNAC S+D + +VGVCFV
Sbjct: 675 SKNVTQELLLHALQGDEDKNVEIKLKAFGSQQHKKAVYVVVNACCSKDYTNKIVGVCFVG 734
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
D+T QK VMDKF I+GDYKAIV +P+PLIPPIF SDE C EWN AM LTG+ +E+
Sbjct: 735 HDVTGQKNVMDKFVNIQGDYKAIVHSPSPLIPPIFASDENSCCTEWNTAMEILTGYGKED 794
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECL 848
VI K L+ E+FG+ CRLK ++ +VL+ A+ GQD +K PF F+ R G+Y + L
Sbjct: 795 VIGKTLVGEIFGS---ICRLKGHDSLTKFMVVLHNAIGGQDSDKFPFSFYNRGGRYVQGL 851
Query: 849 LCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLS 908
L NK+ + +G +TG FCFLQ+AS +LQQAL +QR E +R+K LAY ++I+NPL+
Sbjct: 852 LTANKRTNIDGHITGAFCFLQIASSDLQQALEIQRQQENVCFERMKELAYLCQEIKNPLN 911
Query: 909 GIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNE 968
GI F+ ++E T LG +QK+ + TS C++Q+ KIL D L+S+ + +L EF L
Sbjct: 912 GIRFANSLLEATSLGEDQKQFIETSNACEKQIKKILGDIHLESVDESPFELVKTEFMLGN 971
Query: 969 VLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN-GG 1027
++ A +SQVM+ + ++++ + E+I + + GD IR+QQ+LA+FL + + P+ G
Sbjct: 972 IINAVVSQVMIPLRERELQLIRDIPEEIKTLAVCGDQIRIQQILAEFLVNMVRYAPSPDG 1031
Query: 1028 QLMVSSSLTKDQLGQSVHLAYLELR 1052
+ + Q+ +AY+E R
Sbjct: 1032 WVEIHVLPRLKQVADGATVAYIEYR 1056
>gi|57791676|gb|AAW56606.1| phytochrome D [Arabidopsis halleri]
Length = 1165
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/1067 (51%), Positives = 735/1067 (68%), Gaps = 23/1067 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSA------RVIAQTTIDAKLHADFETSG---TSFDYSNSVRVS 52
SS+ AQ S N H A + I Q T+DA+LHA FE SG SFDYS S++
Sbjct: 34 SSASKAQRSQNQQPQNHGAGTESTSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK-- 91
Query: 53 STAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNH 112
TA D ++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++
Sbjct: 92 -TAPYDPSVPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQ 149
Query: 113 AVPSVGD-HPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIV 171
+VPS+ + VL IG+D++++F + S L++A E++LLNPI +H K +GKPFYAI+
Sbjct: 150 SVPSIEEISEVLTIGTDLRSLFKSSSIVLLERAFVAREITLLNPIWIHSKNTGKPFYAIL 209
Query: 172 HRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVF 231
HRV ++ID EP + + ++ AGA+QS KLA +AI+ LQSLP G ++ LCDT++ V
Sbjct: 210 HRVDVGILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVR 269
Query: 232 ELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIV 291
+LTGYDRVM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIV
Sbjct: 270 DLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIV 329
Query: 292 DCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD 351
DC A V+V+QD++L + L GSTLRAPH CH QYM NM SIASL MA+++N EE+G+
Sbjct: 330 DCYASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAIIINGNEEDGN 389
Query: 352 --NTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNI 409
NT + RLWGLVVCH+T+ R +PFPLR ACEFL Q F + +N EL+L Q+ EK +
Sbjct: 390 GVNTGGRNSMRLWGLVVCHHTSARCIPFPLRCACEFLMQAFGLQLNMELQLALQVSEKRV 449
Query: 410 LRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVS 469
LR QTLLCDML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGV P + Q++DIV
Sbjct: 450 LRMQTLLCDMLLRDSPTGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQINDIVE 509
Query: 470 WLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWG 529
WL H DSTGLS DSL DAGY A ALGD VCGMA I+ +D +FWFRS T E++WG
Sbjct: 510 WLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWG 569
Query: 530 GAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTL 589
GAKH P++KDDG++M PR+SF+AFLEVVK+R PW+ EMDAIHSLQLILR++FK+ +
Sbjct: 570 GAKHHPEDKDDGQRMXPRASFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAM 629
Query: 590 DLDTKS---IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIA 646
D + + D+ +G++E+ V EM+RLIETATVPI AVD+DG +NGWN KIA
Sbjct: 630 DSKASAPGGVQPHGDDMAEQGLQEIGTVAREMIRLIETATVPIFAVDIDGCINGWNAKIA 689
Query: 647 ELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPI 705
ELTGLSV++A+GK + L+ +T R+L AL+G E +N++ ++KT ++ +
Sbjct: 690 ELTGLSVEEAMGKSLVRDLIYKEYEETADRLLSCALKGDEGKNVEVKLKTFAPELQGKAV 749
Query: 706 TLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGS 765
++VNAC+S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +
Sbjct: 750 FVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAA 809
Query: 766 DEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAM 825
DE C EWN AM KLTGW R EVI KLL+ EVFG+ CCRLK +A IVL+ A+
Sbjct: 810 DENTCCIEWNTAMEKLTGWPRSEVIGKLLVREVFGS---CCRLKGPDALTKFMIVLHNAI 866
Query: 826 SGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLS 885
GQ+ +K PF FF R GK+ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR
Sbjct: 867 GGQETDKFPFPFFDREGKFIQALLTLNKRVSVDGKIIGAFCFLQIPSPELQQALEVQRRQ 926
Query: 886 EQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILD 945
E R K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ KI+
Sbjct: 927 ESEYFSRRKELAYIFQFIKNPLSGLRFTNSLLEATDLNEDQKQLLETSVSCEKQISKIVG 986
Query: 946 DSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDS 1005
+ D+ SI DG LE EF + V+ A +SQV+ + I+++ +I S +YGD
Sbjct: 987 EMDVISIGDGSFLLERTEFFIGSVINAVVSQVIFVVRERNIQLIRNIPAEIKSMAVYGDQ 1046
Query: 1006 IRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
IRLQQVLA+FL + + P G + + Q+ LE R
Sbjct: 1047 IRLQQVLAEFLLSIVRYAPLEGSVELHLCPVLKQMADGFSAIRLEFR 1093
>gi|240119419|dbj|BAH79258.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/1037 (51%), Positives = 735/1037 (70%), Gaps = 10/1037 (0%)
Query: 19 SARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGK 78
++RV +Q +DA LH +FE S FDYS SV ++ + P S + YL IQ+G
Sbjct: 17 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSS--AVSTYLQKIQRGM 74
Query: 79 LIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSA 138
LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D+K++F +P +
Sbjct: 75 LIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGS 134
Query: 139 SALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGAL 198
SALQKA+ FGE+S+LNPI +HC +S KPFYAI+HR+ L+ID EPV P EVP+TAAGAL
Sbjct: 135 SALQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGAL 194
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFH+D HGEV++E +
Sbjct: 195 RSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCR 254
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
LEPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L ++L GSTLR
Sbjct: 255 EDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLR 314
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFP 378
APH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH+ +PRFVPFP
Sbjct: 315 APHGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFP 374
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
LRYACEF+ QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI+TQSPNIMDL
Sbjct: 375 LRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDL 434
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
VKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL ++GY A LG
Sbjct: 435 VKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLG 494
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVK 558
+ +CGMAAV I+ KD +FWFRS A E++WGGA+H+P+++ DG++MHPRSSFKAF+E+V+
Sbjct: 495 ESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDR-DGKRMHPRSSFKAFMEIVR 553
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEM 618
+S+PW D EMDAI+SLQLI++ + ++ + ++ + D +++ + EL + +EM
Sbjct: 554 WKSMPWDDMEMDAINSLQLIIKGSLQEEHSKTVE----NVPFVDNRVQKVDELCVIVNEM 609
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLY 678
VRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED S +TV ML
Sbjct: 610 VRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLA 669
Query: 679 LALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVM 738
LAL+G EE+ + I+ G K PI L+VN C SRD +NV+GVCF+ QD+T QKT+
Sbjct: 670 LALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQKTLT 729
Query: 739 DKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEV 798
+ ++R++GDY I+ + + LIPPIF ++E G C EWN AM KL+G KREE ++K+LL EV
Sbjct: 730 ENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLGEV 789
Query: 799 FGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAECLLCVNKKLDR 857
F +N C +K+ + L I LN SGQ + EK+ FGF+ R+G + E LL NK+ D
Sbjct: 790 FTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRTDI 849
Query: 858 EGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMM 917
EG VTGV CFLQ+ S ELQ AL VQR+SEQ L LAY +++++NP I F + +
Sbjct: 850 EGKVTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQNSL 909
Query: 918 EGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQV 977
+ L +QKRLL TS C+ QL K++ DSD++ I +GY++L EF L E L A + QV
Sbjct: 910 HTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVVKQV 969
Query: 978 MMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTK 1037
S + ++I+ + +I S LYGD++RLQQ+L++ L S++F P L VS +
Sbjct: 970 TELSIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFKVIA 1029
Query: 1038 --DQLGQSVHLAYLELR 1052
+ +G+ + LE R
Sbjct: 1030 RVEAIGKRMKRVELEFR 1046
>gi|240119423|dbj|BAH79260.1| phytochrome C [Cardamine nipponica]
Length = 1111
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/1037 (51%), Positives = 734/1037 (70%), Gaps = 10/1037 (0%)
Query: 19 SARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGK 78
++RV +Q +DA LH +FE S FDYS SV ++ + P S + YL IQ+G
Sbjct: 16 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSS--AVSTYLQKIQRGM 73
Query: 79 LIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSA 138
LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D+K++F +P +
Sbjct: 74 LIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGS 133
Query: 139 SALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGAL 198
SALQKA+ FGE+S+LNPI +HC +S KPFYAI+HR+ L+ID EPV P EVP+TAAGAL
Sbjct: 134 SALQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGAL 193
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFH+D HGEV++E +
Sbjct: 194 RSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCR 253
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
LEPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L ++L GSTLR
Sbjct: 254 EDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLR 313
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFP 378
APH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH+ +PRFVPFP
Sbjct: 314 APHGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFP 373
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
LRYACEF+ QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI+TQSPNIMDL
Sbjct: 374 LRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDL 433
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
VKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL ++GY A G
Sbjct: 434 VKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVFG 493
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVK 558
+ +CGMAAV I+ KD +FWFRS A E++WGGA+H+P+++ DG++MHPRSSFKAF+E+V+
Sbjct: 494 ESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDR-DGKRMHPRSSFKAFMEIVR 552
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEM 618
+S+PW D EMDAI+SLQLI++ + ++ + ++ + D +++ + EL + +EM
Sbjct: 553 WKSMPWDDMEMDAINSLQLIIKGSLQEEHSKTVE----NVPFVDNRVQKVDELCVIVNEM 608
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLY 678
VRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED S +TV ML
Sbjct: 609 VRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLA 668
Query: 679 LALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVM 738
LAL+G EE+ + I+ G K PI L+VN C SRD +NV+GVCF+ QD+T QKT+
Sbjct: 669 LALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQKTLT 728
Query: 739 DKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEV 798
+ ++R++GDY I+ + + LIPPIF ++E G C EWN AM KL+G KREE ++K+LL EV
Sbjct: 729 ENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLGEV 788
Query: 799 FGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAECLLCVNKKLDR 857
F +N C +K+ + L I LN SGQ + EK+ FGF+ R+G + E LL NK+ D
Sbjct: 789 FTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRTDI 848
Query: 858 EGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMM 917
EG VTGV CFLQ+ S ELQ AL VQR+SEQ L LAY +++++NP I F + +
Sbjct: 849 EGKVTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQNSL 908
Query: 918 EGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQV 977
+ L +QKRLL TS C+ QL K++ DSD++ I +GY++L EF L E L A + QV
Sbjct: 909 HTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVVKQV 968
Query: 978 MMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTK 1037
S + ++I+ + +I S LYGD++RLQQ+L++ L S++F P L VS +
Sbjct: 969 TELSIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFKVIA 1028
Query: 1038 --DQLGQSVHLAYLELR 1052
+ +G+ + LE R
Sbjct: 1029 RVEAIGKRMKRVELEFR 1045
>gi|240119411|dbj|BAH79254.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/1037 (51%), Positives = 734/1037 (70%), Gaps = 10/1037 (0%)
Query: 19 SARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGK 78
++RV +Q +DA LH +FE S FDYS SV ++ + P S + YL IQ+G
Sbjct: 17 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSS--AVSTYLQKIQRGM 74
Query: 79 LIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSA 138
LIQPFGCL+ +DEK KVIA+SEN E+L + H VPS+ L IG+D+K++F +P +
Sbjct: 75 LIQPFGCLIVVDEKNLKVIAFSENTEEMLGSIPHTVPSMEQREALSIGTDVKSLFQSPGS 134
Query: 139 SALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGAL 198
SALQKA+ FGE+S+LNPI +HC +S KPFYAI+HR+ L+ID EPV P EVP+TAAGAL
Sbjct: 135 SALQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGAL 194
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFH+D HGEV++E +
Sbjct: 195 RSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCR 254
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
LEPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L ++L GSTLR
Sbjct: 255 EDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLR 314
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFP 378
APH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH+ +PRFVPFP
Sbjct: 315 APHGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFP 374
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
LRYACEF+ QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI+TQSPNIMDL
Sbjct: 375 LRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDL 434
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
VKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL ++GY A LG
Sbjct: 435 VKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLG 494
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVK 558
+ +CGMAAV I+ KD +FWFRS A E++WGGA+H+P+++ DG++MHPRSSFKAF+E+V+
Sbjct: 495 ESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDR-DGKRMHPRSSFKAFMEIVR 553
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEM 618
+S+PW D EMDAI+SLQLI++ + ++ + ++ + D +++ + EL + +EM
Sbjct: 554 WKSMPWDDMEMDAINSLQLIIKGSLQEEHSKTVE----NVPFVDNRVQKVDELCVIVNEM 609
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLY 678
VRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED S +TV ML
Sbjct: 610 VRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLA 669
Query: 679 LALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVM 738
LAL+G EE+ + I+ G K PI L+VN C SRD +NV+GVCF+ QD+T QKT+
Sbjct: 670 LALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQKTLT 729
Query: 739 DKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEV 798
+ ++R++GDY I+ + + LIPPIF ++E G C EWN AM KL+G KREE ++K+LL EV
Sbjct: 730 ENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLGEV 789
Query: 799 FGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAECLLCVNKKLDR 857
F +N C +K+ + L I LN SGQ + EK+ FGF+ R+G + E LL NK+ D
Sbjct: 790 FTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRTDI 849
Query: 858 EGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMM 917
EG VTGV CFLQ+ S ELQ AL VQR+SEQ L LAY +++++NP I F + +
Sbjct: 850 EGKVTGVLCFLQVPSPELQYALQVQRVSEQAITCALDKLAYLRQEVKNPEKAISFLQNSL 909
Query: 918 EGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQV 977
+ L +QKRLL TS C+ QL K++ DSD++ I +GY++L EF L E L A + QV
Sbjct: 910 HTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVVKQV 969
Query: 978 MMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTK 1037
S + ++I+ + +I S LYGD++RLQQ+L++ L S++F P L VS +
Sbjct: 970 TELSIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFKVIA 1029
Query: 1038 --DQLGQSVHLAYLELR 1052
+ +G+ + LE R
Sbjct: 1030 RVEAIGKRMKRVELEFR 1046
>gi|240119409|dbj|BAH79253.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/1037 (51%), Positives = 734/1037 (70%), Gaps = 10/1037 (0%)
Query: 19 SARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGK 78
++RV +Q +DA LH +FE S FDYS SV ++ + P S + YL IQ+G
Sbjct: 17 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSS--AVSTYLQKIQRGM 74
Query: 79 LIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSA 138
LIQPFGCL+ +DEK KVIA+SEN E+L + H VPS+ L IG+D+K++F +P +
Sbjct: 75 LIQPFGCLIVVDEKNLKVIAFSENTEEMLGSIPHTVPSMEQREALSIGTDVKSLFQSPGS 134
Query: 139 SALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGAL 198
SALQKA+ FGE+S+LNPI +HC +S KPFYAI+HR+ L+ID EPV P EVP+TAAGAL
Sbjct: 135 SALQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGAL 194
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFH+D HGEV++E +
Sbjct: 195 RSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCR 254
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
LEPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L ++L GSTLR
Sbjct: 255 EDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLR 314
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFP 378
APH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH+ +PRFVPFP
Sbjct: 315 APHGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFP 374
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
LRYACEF+ QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI+TQSPNIMDL
Sbjct: 375 LRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDL 434
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
VKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL ++GY A LG
Sbjct: 435 VKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLG 494
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVK 558
+ +CGMAAV I+ KD +FWFRS A E++WGGA+H+P+++ DG++MHPRSSFKAF+E+V+
Sbjct: 495 ESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDR-DGKRMHPRSSFKAFMEIVR 553
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEM 618
+S+PW D EMDAI+SLQLI++ + ++ + ++ + D +++ + EL + +EM
Sbjct: 554 WKSMPWDDMEMDAINSLQLIIKGSLQEEHSKTVE----NVPFVDNRVQKVDELCVIVNEM 609
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLY 678
VRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED S +TV ML
Sbjct: 610 VRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLA 669
Query: 679 LALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVM 738
LAL+G EE+ + I+ G K PI L+VN C SRD +NV+GVCF+ QD+T QKT+
Sbjct: 670 LALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQKTLT 729
Query: 739 DKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEV 798
+ ++R++GDY I+ + + LIPPIF ++E G C EWN AM KL+G KREE ++K+LL EV
Sbjct: 730 ENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLGEV 789
Query: 799 FGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAECLLCVNKKLDR 857
F +N C +K+ + L I LN SGQ + EK+ FGF+ R+G + E LL NK+ D
Sbjct: 790 FTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRTDI 849
Query: 858 EGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMM 917
EG VTGV CFLQ+ S ELQ AL VQR+SEQ L LAY +++++NP I F + +
Sbjct: 850 EGKVTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQNSL 909
Query: 918 EGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQV 977
+ L +QKRLL TS C+ QL K++ DSD++ I +GY++L EF L E L A + QV
Sbjct: 910 HTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVVKQV 969
Query: 978 MMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTK 1037
S + ++I+ + +I S LYGD++RLQQ+L++ L S++F P L VS +
Sbjct: 970 TELSIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFKVIA 1029
Query: 1038 --DQLGQSVHLAYLELR 1052
+ +G+ + LE R
Sbjct: 1030 RVEAIGKRMKRVELEFR 1046
>gi|240119407|dbj|BAH79252.1| phytochrome C [Cardamine nipponica]
gi|240119413|dbj|BAH79255.1| phytochrome C [Cardamine nipponica]
gi|240119415|dbj|BAH79256.1| phytochrome C [Cardamine nipponica]
gi|240119417|dbj|BAH79257.1| phytochrome C [Cardamine nipponica]
gi|240119421|dbj|BAH79259.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/1037 (51%), Positives = 735/1037 (70%), Gaps = 10/1037 (0%)
Query: 19 SARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGK 78
++RV +Q +DA LH +FE S FDYS SV ++ + P S + YL IQ+G
Sbjct: 17 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSS--AVSTYLQKIQRGM 74
Query: 79 LIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSA 138
LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D+K++F +P +
Sbjct: 75 LIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGS 134
Query: 139 SALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGAL 198
SALQKA+ FGE+S+LNPI +HC +S KPFYAI+HR+ L+ID EPV P EVP+TAAGAL
Sbjct: 135 SALQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGAL 194
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFH+D HGEV++E +
Sbjct: 195 RSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCR 254
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
LEPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L ++L GSTLR
Sbjct: 255 EDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLR 314
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFP 378
APH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH+ +PRF+PFP
Sbjct: 315 APHGCHAQYMSNMGSVASLVMSVTINCSDSDDMNRDLQTGRSLWGLVVCHHASPRFMPFP 374
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
LRYACEF+ QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI+TQSPNIMDL
Sbjct: 375 LRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDL 434
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
VKCDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL ++GY A LG
Sbjct: 435 VKCDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLG 494
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVK 558
+ +CGMAAV I+ KD +FWFRS A E++WGGA+H+P+++ DG++MHPRSSFKAF+E+V+
Sbjct: 495 ESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDR-DGKRMHPRSSFKAFMEIVR 553
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEM 618
+S+PW D EMDAI+SLQLI++ + ++ + ++ + D +++ + EL + +EM
Sbjct: 554 WKSMPWDDMEMDAINSLQLIIKGSLQEEHSKTVE----NVPFVDNRVQKVDELCVIVNEM 609
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLY 678
VRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED S +TV ML
Sbjct: 610 VRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLA 669
Query: 679 LALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVM 738
LAL+G EE+ + I+ G K PI L+VN C SRD +NV+GVCF+ QD+T QKT+
Sbjct: 670 LALKGSEERGAEIRIRAFGPKRKSSPIDLVVNTCCSRDRKNNVLGVCFIGQDVTGQKTLT 729
Query: 739 DKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEV 798
+ ++R++GDY I+ + + LIPPIF ++E G C EWN AM KL+G KREE ++K+LL EV
Sbjct: 730 ENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLGEV 789
Query: 799 FGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAECLLCVNKKLDR 857
F +N C +K+ + L I LN SGQ + EK+ FGF+ R+G + E LL NK+ D
Sbjct: 790 FTSNEYGCPVKDHDTLTKLRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRTDI 849
Query: 858 EGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMM 917
EG VTGV CFLQ+ S ELQ AL VQR+SEQ L LAY +++++NP I F + +
Sbjct: 850 EGKVTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQNSL 909
Query: 918 EGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQV 977
+ L +QKRLL TS C+ QL K++ DSD++ I +GY++L EF L E L A + QV
Sbjct: 910 HTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVVKQV 969
Query: 978 MMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTK 1037
S + ++I+ + +I S LYGD++RLQQ+L++ L S++F P L VS +
Sbjct: 970 TELSIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLHFTPAMKGLCVSFKVIA 1029
Query: 1038 --DQLGQSVHLAYLELR 1052
+ +G+ + LE R
Sbjct: 1030 RVEAIGKRMKRVELEFR 1046
>gi|240119425|dbj|BAH79261.1| phytochrome C [Cardamine resedifolia]
Length = 1112
Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/1037 (51%), Positives = 734/1037 (70%), Gaps = 10/1037 (0%)
Query: 19 SARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGK 78
++RV +Q +DA LH +FE S FDYS SV ++ + P S + YL +IQ+G
Sbjct: 17 NSRVTSQVLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSS--AVSTYLQNIQRGM 74
Query: 79 LIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSA 138
LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D+K++F +P +
Sbjct: 75 LIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGS 134
Query: 139 SALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGAL 198
SALQKA+ FGE+S+LNPI +HC +S KPFYAI+HR+ L+ID EPV P EVP+TAAGAL
Sbjct: 135 SALQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLLIDLEPVSPDEVPVTAAGAL 194
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFH+D HGEV++E +
Sbjct: 195 RSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCR 254
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
LEPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L ++L GSTLR
Sbjct: 255 EDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLR 314
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFP 378
APH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH+ +PRFVPFP
Sbjct: 315 APHGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFP 374
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
LRYACEF+ QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI+TQSPNIMDL
Sbjct: 375 LRYACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDL 434
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
V+CDGAAL Y++K+W LGVTP + Q+ D++ W+ + H +TG + +SL ++GY A LG
Sbjct: 435 VECDGAALFYRDKLWSLGVTPTETQIRDLIHWVLKSHGGNTGFTTESLMESGYPDASVLG 494
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVK 558
+ +CGMAAV I+ KD +FWFRS A E++WGGA+H+P+++ DG++MHPRSSFKAF+E+V+
Sbjct: 495 ESICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDR-DGKRMHPRSSFKAFMEIVR 553
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEM 618
+S+PW D EMDAI+SLQLI++ + ++ + ++ + D +++ + EL + +EM
Sbjct: 554 WKSMPWDDMEMDAINSLQLIIKGSLQEEHSKTVE----NVPFVDNRVQKVDELCVIVNEM 609
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLY 678
VRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED S +TV ML
Sbjct: 610 VRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLA 669
Query: 679 LALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVM 738
LAL+G EE+ + I+ G K I L+VN C SRD +NV+GVCF+ QD+T QKT+
Sbjct: 670 LALKGSEERGAEIRIRAFGPKRKSSSIYLVVNTCCSRDRKNNVLGVCFIGQDVTGQKTLT 729
Query: 739 DKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEV 798
+ ++R++GDY I+ + + LIPPIF ++E G C EWN AM KL+G KREE ++K+LL EV
Sbjct: 730 ENYSRMQGDYARIMSSHSTLIPPIFMTNEDGLCSEWNNAMQKLSGIKREEAVNKMLLGEV 789
Query: 799 FGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAECLLCVNKKLDR 857
F +N C +K+ + + I LN SGQ + EK+ FGF+ R+G + E LL NK+ D
Sbjct: 790 FTSNEYGCPVKDHDTLTKMRIALNAVGSGQKNVEKLFFGFYHRDGSFIEALLSANKRTDI 849
Query: 858 EGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMM 917
EG VTGV CFLQ+ S ELQ AL VQR+SEQ L LAY +++++NP I F + +
Sbjct: 850 EGKVTGVLCFLQVPSPELQYALQVQRVSEQAIACALDKLAYLRQEVKNPEKAISFLQNSL 909
Query: 918 EGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQV 977
+ L +QKRLL TS C+ QL K++ DSD++ I +GY++L EF L E L A + QV
Sbjct: 910 NTSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELGCSEFNLEESLEAVVKQV 969
Query: 978 MMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTK 1037
S + ++I+ + +I S LYGD++RLQQ+L++ L S+ F P L VS +
Sbjct: 970 TELSIERKVQIICDYPIEISSMRLYGDNLRLQQILSETLLSSLRFTPAMKGLCVSFKVIA 1029
Query: 1038 --DQLGQSVHLAYLELR 1052
+ +G+ + LE R
Sbjct: 1030 RVEAIGKRMKRVELEFR 1046
>gi|73760088|dbj|BAE20162.1| phytochrome [Mougeotia scalaris]
gi|73760098|dbj|BAE20167.1| phytochrome [Mougeotia scalaris]
Length = 1124
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/1033 (53%), Positives = 731/1033 (70%), Gaps = 9/1033 (0%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAG-GDQQPRSDRVTTAYLHHIQKGKLIQ 81
+ Q + DAKL FE S +S S S TA +P + + TAYL +Q+G +IQ
Sbjct: 23 VTQASADAKLSTAFEVSSSSGGDSFDYTKSVTASLNPTEPLAAKSVTAYLQRMQRGSIIQ 82
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
FGC++A++ TF++IAYSEN E+L + +VP+ +GIG+D++++ + S S +
Sbjct: 83 SFGCMMAVEPGTFRIIAYSENVSEMLGVTPQSVPTGDQQNAIGIGTDVRSLLSPSSVSVV 142
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEV-PMTAAGALQS 200
+KA+ +VS++NPI V+ + KPF+AI+H L+ID EP+ M +AGA+QS
Sbjct: 143 EKAVAANDVSMMNPITVYSLATQKPFFAILHMNDVGLVIDLEPISSSSDSAMFSAGAVQS 202
Query: 201 YKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSG 260
+KLAAKAI+RLQSLP G + LCD +++EV ELTGYDRVMAYKFH+D+HGEVV+EI +S
Sbjct: 203 HKLAAKAISRLQSLPGGDICGLCDVVVEEVRELTGYDRVMAYKFHDDEHGEVVAEIRRSD 262
Query: 261 LEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAP 320
LEPYLGLHYPATDIPQA+RFLF+KN++RMI DC + VKV+QD ++P +++L GST+R
Sbjct: 263 LEPYLGLHYPATDIPQASRFLFIKNRIRMICDCTSPQVKVVQDSRIPQEMSLAGSTMRGV 322
Query: 321 HSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLR 380
H CH QYM NM S ASLVM+V +ND E K ++LWGL+VCH++TPR +PFP+R
Sbjct: 323 HGCHTQYMMNMGSTASLVMSVTINDTNEIAGGP-GMKGRKLWGLIVCHHSTPRHIPFPIR 381
Query: 381 YACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVK 440
ACEFL QVF + +N E+EL Q EK+ILRTQTLLCDML+RDAP+GIV+QSPN+MDLVK
Sbjct: 382 SACEFLMQVFGLQLNMEVELAAQHREKHILRTQTLLCDMLLRDAPMGIVSQSPNVMDLVK 441
Query: 441 CDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDV 500
CDGAALL+ + W LG++P Q+ DI +WL H D+TGLS DSL DAGY A LG
Sbjct: 442 CDGAALLFGGRCWLLGISPTQEQVKDIATWLISSHTDTTGLSTDSLVDAGYPKARELGVD 501
Query: 501 VCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTR 560
VCGMAA RI+ D +FWFR EV+W GAK E +DG +MHPRSSFKAFLEVVK R
Sbjct: 502 VCGMAAARITENDFLFWFRGHAQKEVKWAGAKDGGSE-EDGSRMHPRSSFKAFLEVVKQR 560
Query: 561 SLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVR 620
SLPW+D EMDAIHSLQLILR +F+D+ + D K +H++L ++ ++GM+EL +V SEMVR
Sbjct: 561 SLPWEDVEMDAIHSLQLILRGSFQDIEDKE-DRKIVHARLKEMHLQGMEELSSVASEMVR 619
Query: 621 LIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYL 679
LIETAT PILAVD G VNGWN KI+ELTGLS+ + +GK + L SS DTV+++LY+
Sbjct: 620 LIETATAPILAVDTAGCVNGWNFKISELTGLSIPEVMGKSLVKDLTHPSSKDTVEKLLYM 679
Query: 680 ALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMD 739
AL G+EEQN++ +KT G + P+ L+VNACASRD+ + VVGVCFVAQD+T +K V D
Sbjct: 680 ALNGEEEQNVEIRLKTWGMQQGKGPVILMVNACASRDVSEKVVGVCFVAQDVTGEKIVQD 739
Query: 740 KFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVF 799
KFTRI+GDY IV++ N LIPPIFGSDE G+C EWNPAM +L+G KREE I K+L E+F
Sbjct: 740 KFTRIQGDYTTIVRSHNSLIPPIFGSDESGFCVEWNPAMERLSGVKREEAIGKMLTRELF 799
Query: 800 GTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREG 859
G RLKN + IVLN AMS D +K PF F+ R+GK E LL +K+ + EG
Sbjct: 800 G---GILRLKNVDGLTKFMIVLNAAMSSHDTDKFPFTFYDRSGKIVEVLLTTSKRCNSEG 856
Query: 860 AVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEG 919
VTGVFCFL AS ELQQAL VQ+ +E+ A + K LAY +++I+NPL GI F+R ME
Sbjct: 857 VVTGVFCFLHTASSELQQALTVQKAAERVAEVKAKELAYIRQEIQNPLDGIHFARSFMEH 916
Query: 920 TELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMM 979
T L +QK+L+ TSA C++QL +IL D DL SI GYL+LE EF++ V+ + +SQ M+
Sbjct: 917 TVLSEDQKQLIETSATCEKQLRRILADMDLASIEKGYLELETGEFSMATVMNSVVSQGMI 976
Query: 980 KSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQ 1039
+S K +++ +T S +++GD +RLQQVLADFL ++ F P G + + +
Sbjct: 977 QSTQKNLQLYCDTPPDFKSLSVFGDQVRLQQVLADFLLNAVQFTPPSGWVEIKVEPVVKK 1036
Query: 1040 LGQSVHLAYLELR 1052
L V +A L+ R
Sbjct: 1037 LPGGVSVAKLDFR 1049
>gi|158321996|gb|ABW33477.1| phytochrome P [Pinus sylvestris]
gi|158321998|gb|ABW33478.1| phytochrome P [Pinus sylvestris]
gi|158322000|gb|ABW33479.1| phytochrome P [Pinus sylvestris]
gi|158322002|gb|ABW33480.1| phytochrome P [Pinus sylvestris]
gi|158322004|gb|ABW33481.1| phytochrome P [Pinus sylvestris]
gi|158322006|gb|ABW33482.1| phytochrome P [Pinus sylvestris]
gi|158322008|gb|ABW33483.1| phytochrome P [Pinus sylvestris]
gi|158322010|gb|ABW33484.1| phytochrome P [Pinus sylvestris]
gi|158322012|gb|ABW33485.1| phytochrome P [Pinus sylvestris]
gi|158322014|gb|ABW33486.1| phytochrome P [Pinus sylvestris]
gi|158322016|gb|ABW33487.1| phytochrome P [Pinus sylvestris]
gi|158322020|gb|ABW33489.1| phytochrome P [Pinus sylvestris]
gi|158322022|gb|ABW33490.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/873 (60%), Positives = 667/873 (76%), Gaps = 16/873 (1%)
Query: 39 SGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIA 98
SG SFDY+ S++ ++ + +QQ TAYL IQ+G IQPFGC+LA++E TF++IA
Sbjct: 3 SGKSFDYTRSIKSTTESVPEQQ------ITAYLSRIQRGGRIQPFGCVLAVEETTFRIIA 56
Query: 99 YSENAPELLTMVNHAVPSV--GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPI 156
YSENA E+L + +VPS+ VL IG+D++T+FTA SA +L+KA E+SL+NPI
Sbjct: 57 YSENAVEMLDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPI 116
Query: 157 LVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPS 216
VHCK S KPFYAIVHR+ ++ID EP++ + M+AAGA+QS KLA +AI+RLQSLP
Sbjct: 117 WVHCKNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPC 176
Query: 217 GSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQ 276
G + LCDT+++ V ELTGYDRVM YKFHED+HGEVV+EI +S LEPYLGLHYPATDIPQ
Sbjct: 177 GDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQ 236
Query: 277 AARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIAS 336
A+RFLFM+N+VRMI DC A VKV+Q E+L L L GSTLRAPH CH QYM NM SIAS
Sbjct: 237 ASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIAS 296
Query: 337 LVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNK 396
LVMAV++N ++EG + + +LWGLVVCH+T+PR VPFPLRYACEFL Q + +N
Sbjct: 297 LVMAVIINGNDDEGGGS-GRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNM 355
Query: 397 ELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLG 456
EL+L Q+ EK+ILRTQTLLCDML+RDAP+GIVTQSP+I DLVKCDGAAL Y W LG
Sbjct: 356 ELQLAAQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLG 415
Query: 457 VTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIF 516
VTP + Q+ DI WL E+H DSTGLS DSL DAGY GA +LGD VCGMA+ RI+ KD +F
Sbjct: 416 VTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLF 475
Query: 517 WFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQ 576
WFRS TA E++WGGAKH PD+KDD R+MHPRSSFKAFLEVVK RSLPW + E+DAIHSLQ
Sbjct: 476 WFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQ 535
Query: 577 LILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVD 635
LILR +F+D+ D TK+ +HS+L DL+++G+ EL +V SEMVRLIETAT PILAVD +
Sbjct: 536 LILRGSFRDID--DSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYN 593
Query: 636 GLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIK 694
GLVNGWN K+AELTGL V +A+G + LV + S++ V++ML+ AL+G+EE+N++ +K
Sbjct: 594 GLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLK 653
Query: 695 THGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQN 754
T G + + + L+VNAC+SRD DN+VGVCFV QD+T QK VMDKF RI+GDY++IVQ+
Sbjct: 654 TFGPQKEKEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQS 713
Query: 755 PNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAF 814
PNPLIPPIF SDE+ C EWN AM K+TGW +EVI K+L+ E+FG CCRLK Q+A
Sbjct: 714 PNPLIPPIFASDEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEIFG---GCCRLKGQDAV 770
Query: 815 VNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHE 874
IVL+ A+ GQ+ EK PF FF + GKY E LL NK+ D +G +TG FCFLQ+AS E
Sbjct: 771 TKFTIVLHSAIDGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSE 830
Query: 875 LQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LQ AL VQR E+ RLK LAY +++I+NPL
Sbjct: 831 LQHALEVQRQQEKKCFARLKELAYIRQEIKNPL 863
>gi|158322024|gb|ABW33491.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/873 (60%), Positives = 667/873 (76%), Gaps = 16/873 (1%)
Query: 39 SGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIA 98
SG SFDY+ S++ ++ + +QQ TAYL IQ+G IQPFGC+LA++E TF++IA
Sbjct: 3 SGKSFDYTRSIKSTTESVPEQQ------ITAYLSRIQRGGRIQPFGCVLAVEETTFRIIA 56
Query: 99 YSENAPELLTMVNHAVPSV--GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPI 156
YSENA E+L + +VPS+ VL IG+D++T+FTA SA +L+KA E+SL+NPI
Sbjct: 57 YSENAVEMLDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPI 116
Query: 157 LVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPS 216
VHCK S KPFYAIVHR+ ++ID EP++ + M+AAGA+QS KLA +AI+RLQSLP
Sbjct: 117 WVHCKNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPC 176
Query: 217 GSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQ 276
G + LCDT+++ V ELTGYDRVM YKFHED+HGEVV+EI +S LEPYLGLHYPATDIPQ
Sbjct: 177 GDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQ 236
Query: 277 AARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIAS 336
A+RFLFM+N+VRMI DC A VKV+Q E+L L L GSTLRAPH CH QYM NM SIAS
Sbjct: 237 ASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIAS 296
Query: 337 LVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNK 396
LVMAV++N ++EG + + +LWGLVVCH+T+PR VPFPLRYACEFL Q + +N
Sbjct: 297 LVMAVIINGNDDEGGGS-GRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNM 355
Query: 397 ELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLG 456
EL+L Q+ EK+ILRTQTLLCDML+RDAP+GIVTQSP+I DLVKCDGAAL Y W LG
Sbjct: 356 ELQLAAQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWLLG 415
Query: 457 VTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIF 516
VTP + Q+ DI WL E+H DSTGLS DSL DAGY GA +LGD VCGMA+ RI+ KD +F
Sbjct: 416 VTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLF 475
Query: 517 WFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQ 576
WFRS TA E++WGGAKH PD+KDD R+MHPRSSFKAFLEVVK RSLPW + E+DAIHSLQ
Sbjct: 476 WFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQ 535
Query: 577 LILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVD 635
LILR +F+D+ D TK+ +HS+L DL+++G+ EL +V SEMVRLIETAT PILAVD +
Sbjct: 536 LILRGSFRDID--DSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYN 593
Query: 636 GLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIK 694
GLVNGWN K+AELTGL V +A+G + LV + S++ V++ML+ AL+G+EE+N++ +K
Sbjct: 594 GLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLK 653
Query: 695 THGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQN 754
T G + + + L+VNAC+SRD DN+VGVCFV QD+T QK VMDKF RI+GDY++IVQ+
Sbjct: 654 TFGPQKEKEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQS 713
Query: 755 PNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAF 814
PNPLIPPIF SDE+ C EWN AM K+TGW +EVI K+L+ E+FG CCRLK Q+A
Sbjct: 714 PNPLIPPIFASDEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEIFG---GCCRLKGQDAV 770
Query: 815 VNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHE 874
IVL+ A+ GQ+ EK PF FF + GKY E LL NK+ D +G +TG FCFLQ+AS E
Sbjct: 771 TKFTIVLHSAIDGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSE 830
Query: 875 LQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LQ AL VQR E+ RLK LAY +++I+NPL
Sbjct: 831 LQHALEVQRQQEKKCFARLKELAYIRQEIKNPL 863
>gi|2507185|sp|P33529.2|PHY_MOUSC RecName: Full=Phytochrome
gi|1419681|emb|CAA64796.1| phytochrome [Mougeotia scalaris]
Length = 1124
Score = 1109 bits (2869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1034 (53%), Positives = 733/1034 (70%), Gaps = 11/1034 (1%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAG-GDQQPRSDRVTTAYLHHIQKGKLIQ 81
+ Q + DAKL FE S +S S S TA +P + + TAYL +Q+G +IQ
Sbjct: 23 VTQASADAKLSTAFEVSSSSGGDSFDYTKSVTASLNPTEPLAAKSVTAYLQRMQRGSIIQ 82
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP-VLGIGSDIKTIFTAPSASA 140
FGC++A++ TF++IAYSEN E+L + +VP+ GDH +GIG+D++++ + S S
Sbjct: 83 SFGCMMAVEPGTFRIIAYSENVSEMLGVTPQSVPT-GDHQNAIGIGTDVRSLLSPSSVSV 141
Query: 141 LQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEV-PMTAAGALQ 199
++KA+ +VS++NPI V+ + K F+AI+H L+ID EP+ M +AGA+Q
Sbjct: 142 VEKAVAANDVSMMNPIAVYSLATQKLFFAILHMNDVGLVIDLEPISSSSDSAMFSAGAVQ 201
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
S+KLAAKAI+RLQSLP G + LCD +++EV ELTGYDRVMAYKFH+D+HGEVV+EI +S
Sbjct: 202 SHKLAAKAISRLQSLPGGDICGLCDVVVEEVRELTGYDRVMAYKFHDDEHGEVVAEIRRS 261
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
LEPYLGLHYPATDIPQA+RFLF+KN++RMI DC + VKV+QD ++P +++L GST+R
Sbjct: 262 DLEPYLGLHYPATDIPQASRFLFIKNRIRMICDCTSPQVKVVQDSRIPQEMSLAGSTMRG 321
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPL 379
H CH QYM NM S ASLVM+V +ND E K ++LWGL+VCH++TPR +PFP+
Sbjct: 322 VHGCHTQYMMNMGSTASLVMSVTINDTNEIAGGP-GMKGRKLWGLIVCHHSTPRHIPFPI 380
Query: 380 RYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLV 439
R ACEFL QVF + +N E+EL Q EK+ILRTQTLLCDML+RDAP+GIV+QSPN+MDLV
Sbjct: 381 RSACEFLMQVFGLQLNMEVELAAQHREKHILRTQTLLCDMLLRDAPMGIVSQSPNVMDLV 440
Query: 440 KCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGD 499
KCDGAALL+ + W LG++P Q+ DI +WL H D+TGLS DSL DAGY A LG
Sbjct: 441 KCDGAALLFGGRCWLLGISPTQEQVKDIATWLISSHTDTTGLSTDSLVDAGYPKARELGV 500
Query: 500 VVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKT 559
VCGMAA RI+ D +FWFR EV+W GAK E +DG +MHPRSSFKAFLEVVK
Sbjct: 501 DVCGMAAARITENDFLFWFRGHAQKEVKWAGAKDGGSE-EDGSRMHPRSSFKAFLEVVKQ 559
Query: 560 RSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMV 619
RSLPW+D EMDAIHSLQLILR +F+D+ + D K +H++L ++ ++GM+EL +V SEMV
Sbjct: 560 RSLPWEDVEMDAIHSLQLILRGSFQDIEDKE-DRKIVHARLKEMHLQGMEELSSVASEMV 618
Query: 620 RLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLY 678
RLIETAT PILAVD G VNGWN KI+ELTGLS+ + +GK + L SS DTV+++LY
Sbjct: 619 RLIETATAPILAVDTAGCVNGWNFKISELTGLSIPEVMGKSLVKDLTHPSSKDTVEKLLY 678
Query: 679 LALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVM 738
+AL G+EEQN++ +KT G + P+ L+VNACASRD+ + VVGVCFVAQD+T +K V
Sbjct: 679 MALNGEEEQNVEIRLKTWGMQQGKGPVILMVNACASRDVSEKVVGVCFVAQDVTGEKIVQ 738
Query: 739 DKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEV 798
DKFTRI+GDY IV++ N LIPPIFGSDE G+C EWNPAM +L+G KREE I K+L E+
Sbjct: 739 DKFTRIQGDYTTIVRSHNSLIPPIFGSDESGFCVEWNPAMERLSGVKREEAIGKMLTREL 798
Query: 799 FGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDRE 858
FG RLKN + IVLN AMS D +K PF F+ R+GK E LL +K+ + E
Sbjct: 799 FG---GILRLKNVDGLTKFMIVLNAAMSSHDTDKFPFTFYDRSGKIVEVLLTTSKRCNSE 855
Query: 859 GAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMME 918
G VTGVFCFL AS ELQQAL VQ+ +E+ A + K LAY +++I+NPL GI F+R ME
Sbjct: 856 GVVTGVFCFLHTASSELQQALTVQKAAERVAEVKAKELAYIRQEIQNPLDGIHFARSFME 915
Query: 919 GTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVM 978
T L +QK+L+ TSA C++QL +IL D DL SI GYL+LE EF++ V+ + +SQ M
Sbjct: 916 HTVLSEDQKQLIETSATCEKQLRRILADMDLASIEKGYLELETGEFSMATVMNSVVSQGM 975
Query: 979 MKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKD 1038
++S K +++ +T S +++GD +RLQQVLADFL ++ F P G + +
Sbjct: 976 IQSTQKNLQLYCDTPPDFKSLSVFGDQVRLQQVLADFLLNAVQFTPPSGWVEIKVEPVVK 1035
Query: 1039 QLGQSVHLAYLELR 1052
+L V +A ++ R
Sbjct: 1036 KLPGGVSVANVDFR 1049
>gi|158322018|gb|ABW33488.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/873 (60%), Positives = 666/873 (76%), Gaps = 16/873 (1%)
Query: 39 SGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIA 98
SG SFDY+ S++ ++ + +QQ TAYL IQ+G IQPFGC+LA++E TF++IA
Sbjct: 3 SGKSFDYTRSIKSTTESVPEQQ------ITAYLSRIQRGGRIQPFGCVLAVEETTFRIIA 56
Query: 99 YSENAPELLTMVNHAVPSV--GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPI 156
YSENA E+L + +VPS+ VL IG+D++T+FTA SA +L+KA E+SL+NPI
Sbjct: 57 YSENAVEMLDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPI 116
Query: 157 LVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPS 216
VHCK S KPFYAIVHR+ ++ID EP++ + M+AAGA+QS KLA +AI+RLQSLP
Sbjct: 117 WVHCKNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPC 176
Query: 217 GSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQ 276
G + LCDT+++ V ELTGYDRVM YKFHED+HGEVV+EI +S LEPYLGLHYPATDIPQ
Sbjct: 177 GDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQ 236
Query: 277 AARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIAS 336
A+RFLFM+N+VRMI DC A VKV+Q E+L L L GSTLRAPH CH QYM NM SIAS
Sbjct: 237 ASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIAS 296
Query: 337 LVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNK 396
LVMAV++N ++EG + + +LWGLVVCH+T+PR VPFPLRYACEFL Q + +N
Sbjct: 297 LVMAVIINGNDDEGGGS-GRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNM 355
Query: 397 ELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLG 456
EL+L Q+ EK+ILRTQTLLCDML+RDAP+GIVTQSP+I DLVKCDGAAL Y W LG
Sbjct: 356 ELQLAAQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLG 415
Query: 457 VTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIF 516
VTP + Q+ DI WL E+H DSTGLS DSL DAGY GA +LGD VCGMA+ RI+ KD +F
Sbjct: 416 VTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLF 475
Query: 517 WFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQ 576
WFRS TA E++WGGAKH PD+KDD R+MHPRSSFKAFLEVVK RSLPW + E+DAIHSLQ
Sbjct: 476 WFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQ 535
Query: 577 LILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVD 635
LILR +F+D+ D TK+ +HS+L DL+++G+ EL +V SEMVRLIETAT PILAVD +
Sbjct: 536 LILRGSFRDID--DSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYN 593
Query: 636 GLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIK 694
GLVNGWN K+AELTGL V +A+G + LV + S++ V++ML+ AL+G+EE+N++ +K
Sbjct: 594 GLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLK 653
Query: 695 THGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQN 754
T G + + + L+VNAC+SRD DN+VGVCFV QD+T QK VMDKF RI+GDY++IVQ+
Sbjct: 654 TFGPQKEKEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQS 713
Query: 755 PNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAF 814
PNPLIPPIF SDE+ C EWN AM K+TGW +EVI K+ + E+FG CCRLK Q+A
Sbjct: 714 PNPLIPPIFASDEYACCSEWNAAMEKVTGWIHDEVIGKMPVGEIFG---GCCRLKGQDAV 770
Query: 815 VNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHE 874
IVL+ A+ GQ+ EK PF FF + GKY E LL NK+ D +G +TG FCFLQ+AS E
Sbjct: 771 TKFTIVLHSAIDGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRITGSFCFLQIASSE 830
Query: 875 LQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LQ AL VQR E+ RLK LAY +++I+NPL
Sbjct: 831 LQHALEVQRQQEKKCFARLKELAYIRQEIKNPL 863
>gi|89331077|emb|CAJ80905.1| phytochrome A [Chelone obliqua]
Length = 615
Score = 1106 bits (2860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/614 (83%), Positives = 568/614 (92%), Gaps = 1/614 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QE FELTGYDRVM YKFH+DDHGEV SE+TK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEAFELTGYDRVMIYKFHDDDHGEVFSEVTKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA+HVKV+QDEKL FDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRAKHVKVVQDEKLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL-PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 401
VN+ +E+G ++ PQKRKRLWGLVVCHNT+PRF+PFPLRYACEFLAQVFAIHVNKELELE
Sbjct: 181 VNEGDEDGSESVHPQKRKRLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 402 YQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPND 461
Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGAAL+YKNK +++G+TP D
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALMYKNKKYKMGLTPTD 300
Query: 462 FQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQ 521
FQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD +CGMAAV+IS +D +FWFRS
Sbjct: 301 FQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAICGMAAVKISERDWLFWFRSH 360
Query: 522 TASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 581
TA+E+RWGGAKHE EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN
Sbjct: 361 TAAEIRWGGAKHEQGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 582 AFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGW 641
AFKD D DTK+IH++L DL+I+GM+ELEAVTSEMVRLIETA+VPILAVDVDG VNGW
Sbjct: 421 AFKDGENADSDTKAIHTRLTDLRIDGMQELEAVTSEMVRLIETASVPILAVDVDGHVNGW 480
Query: 642 NTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKIN 701
N+KIA+LTGL VD+AIGK FL LVEDSS DTV +ML LAL+G+EEQN+QFE+KTHG + +
Sbjct: 481 NSKIADLTGLPVDEAIGKQFLELVEDSSTDTVSKMLKLALEGKEEQNVQFEVKTHGERSD 540
Query: 702 DDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPP 761
P+TL+VNACAS+D+ +NVVGVCF+AQDIT K +MDKFTRIEGDYKAIVQNPNPLIPP
Sbjct: 541 SGPVTLVVNACASKDVEENVVGVCFIAQDITAHKNMMDKFTRIEGDYKAIVQNPNPLIPP 600
Query: 762 IFGSDEFGWCCEWN 775
IFG+DEFGWC EWN
Sbjct: 601 IFGTDEFGWCSEWN 614
>gi|315377402|gb|ADU05538.1| phytochrome A [Moringa oleifera]
Length = 596
Score = 1105 bits (2858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/596 (87%), Positives = 562/596 (94%), Gaps = 3/596 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEV+SEITK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H+KV
Sbjct: 61 AYKFHDDDHGEVISEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHIKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN--DEEEEGDNTL-PQK 357
LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN DEE +G N + PQK
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNEGDEETDGANPVQPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+Q PNIMDLVKCDGAALLYK+K+WRLGVTP D QLH+I SWLS+YHMD
Sbjct: 241 DMLMRDAPLGIVSQIPNIMDLVKCDGAALLYKSKLWRLGVTPTDVQLHEIASWLSDYHMD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSLYDAG+ GALALGDVV GMAAVRI+ KDM+FWFRS TA+E+RWGGAKHEP E
Sbjct: 301 STGLSTDSLYDAGFPGALALGDVVSGMAAVRITSKDMLFWFRSHTAAEIRWGGAKHEPGE 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T++ +TK+IH
Sbjct: 361 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDTKTVEFNTKTIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLK+EGM+ELEAVTSEMVRLIETATVPILAVDV+GL+NGWNTKI+ELTGL VD+AI
Sbjct: 421 SKLNDLKLEGMQELEAVTSEMVRLIETATVPILAVDVNGLLNGWNTKISELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSSIDTVK+MLY+ALQG+EEQ++QF+IKT GS+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSIDTVKKMLYMALQGKEEQDVQFQIKTFGSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
H+NV GVCFVAQDIT QK VMDKFTRIEGDYKAIVQN NPLIPPIFG+DEFGWC E
Sbjct: 541 HENVAGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNHNPLIPPIFGADEFGWCTE 596
>gi|33333480|gb|AAQ11873.1| phytochrome C [Stellaria longipes]
Length = 1114
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/1040 (50%), Positives = 728/1040 (70%), Gaps = 9/1040 (0%)
Query: 18 HSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKG 77
H A V+ QT +DA+L +DFE S F+Y++SV ++ A P S +YL +Q+G
Sbjct: 15 HDAHVVIQTPVDAQLASDFEQSERVFNYTSSVDLNLLASSSDVPSS--TVKSYLQKVQRG 72
Query: 78 KLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPS 137
LIQ FGCL+A+DEK FKVIAYSENAPE+L + H VP++ L G+D+ T+FT+
Sbjct: 73 GLIQSFGCLIAIDEKNFKVIAYSENAPEMLDLTPHTVPNIEQLEALTFGTDVATLFTSSG 132
Query: 138 ASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197
SALQKA+ + E++LLNPILVH K SGKPFYAI+HR+ L++D E V E + +GA
Sbjct: 133 VSALQKAVNYSELNLLNPILVHSKNSGKPFYAILHRIKVGLVLDLETVNLAETLVGVSGA 192
Query: 198 LQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEIT 257
L SYKLAAKAI++LQSLPS ++ LCD +++EV ELTGYDRVM YKFH+D HGEV+ E
Sbjct: 193 LMSYKLAAKAISKLQSLPSQNIPLLCDVLVKEVRELTGYDRVMVYKFHDDQHGEVIGESH 252
Query: 258 KSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTL 317
L+ YLGLHYPATDIPQA+RFLF+KNKVRMI DCR+ VKV+QDE L L+L GSTL
Sbjct: 253 SPSLDSYLGLHYPATDIPQASRFLFLKNKVRMICDCRSPSVKVIQDEALTQPLSLGGSTL 312
Query: 318 RAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPF 377
RAPH CH QYM NM SIASLVMAV +N+EE+E + + ++LWGLVVCH+T+ RFVP+
Sbjct: 313 RAPHGCHAQYMANMGSIASLVMAVTINNEEDEVSDR--HRTRKLWGLVVCHHTSSRFVPY 370
Query: 378 PLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMD 437
PLRYACEFL QVF IH+NKE+EL Q+ EK+IL+ Q++LCDMLMRD+P+ I+TQSPN+MD
Sbjct: 371 PLRYACEFLVQVFGIHINKEVELAAQVREKHILKIQSMLCDMLMRDSPITIITQSPNVMD 430
Query: 438 LVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALAL 497
LVKCDGAALLY++K+W LG+TP Q+ DI WL EYH ++ GL DSL +AGY GAL L
Sbjct: 431 LVKCDGAALLYQSKLWVLGITPKSNQIKDISQWLFEYHGNTKGLITDSLKEAGYPGALEL 490
Query: 498 GDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVV 557
GD VCGMAAVRIS ++M+FWFRS TA E++WGGAKHEP + D+ MHPRSSF AFL+VV
Sbjct: 491 GDAVCGMAAVRISSEEMLFWFRSHTAKEIKWGGAKHEPGQNDERGIMHPRSSFNAFLDVV 550
Query: 558 KTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMK---ELEAV 614
K RS+PW+D EMD+I+SLQLI T+ +K I + + ++E +
Sbjct: 551 KWRSVPWEDMEMDSIYSLQLIFIKCLVKNKTMSDTSKMIVNVPGVGVGGPLSSALKVEPL 610
Query: 615 TSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVK 674
T E++RLIETA VPI +VDV G +NGWN K+AELTG+ +++ IG + +V + +++ +K
Sbjct: 611 TGEVIRLIETAAVPIFSVDVTGAINGWNFKVAELTGVPMEQVIGSQLVDVVVEGTVEVLK 670
Query: 675 RMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQ 734
+L ALQG EE+N++ ++T GS + L+VNAC SRD+ +NV G+CFV QD+T +
Sbjct: 671 NILSSALQGTEEKNVEIRLRTLGSHGKTSYVVLVVNACCSRDVDENVTGICFVGQDVTEE 730
Query: 735 KTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLL 794
K ++D+ T ++GDY I++NP LIPPIF D+ G EWN AM K++G +E + ++L
Sbjct: 731 KRIVDQITELQGDYSGIMRNPCHLIPPIFLIDDQGVGLEWNDAMAKISGLSKEYTVGRML 790
Query: 795 LAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKK 854
+ EVF C++K+ E + L I L+K + G++ +KV FGFF K + LLC +
Sbjct: 791 IGEVFTNGNDGCQVKDYETLLRLKIFLSKMIDGEESDKVLFGFFDHRKKCIDALLCATPR 850
Query: 855 LDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSR 914
+ + +TGV CFL L S ELQ ++H+Q++SE+ A LK L Y + Q+R+P+ G+ F+R
Sbjct: 851 FNADRNITGVLCFLHLPSPELQYSIHMQKVSEKAATSTLKKLTYFREQVRSPIKGMAFTR 910
Query: 915 KMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASI 974
++E +EL EQK++L T + C+ QL KI++D+D+ SI +GYL+ +F L E L A +
Sbjct: 911 NLLESSELNIEQKQILTTISLCESQLMKIIEDTDIPSIEEGYLETSSDDFNLLEALDAVV 970
Query: 975 SQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVP--NGGQLMVS 1032
SQVM S + I ++ + L+GD++RLQQ+L++FL+I++ F P G + +
Sbjct: 971 SQVMPLSQESQVHIKHDFPSDLSPVCLFGDNVRLQQILSNFLTIAVRFTPPSTGSSVKFA 1030
Query: 1033 SSLTKDQLGQSVHLAYLELR 1052
S + +G + + ++E R
Sbjct: 1031 VSSRTEHVGSKMQMFHVEFR 1050
>gi|255642598|gb|ACU21558.1| phytochrome B [Medicago sativa]
Length = 1061
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/966 (54%), Positives = 699/966 (72%), Gaps = 12/966 (1%)
Query: 68 TAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGD-----HPV 122
TAYL IQ+G IQPFG ++A+DE +F+V+AY+ENA ++L + +VPS+ D
Sbjct: 6 TAYLAKIQRGGFIQPFGSMIAVDEPSFRVLAYNENARDMLGITPQSVPSLEDDDESSSSG 65
Query: 123 LGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182
IG+D++++FT S L+KA E+SL+NPI +H +++GKPFY I+HR+ ++ID
Sbjct: 66 FNIGTDVRSLFTHSSGVLLEKAFSAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDL 125
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCD +++ V ELTGYDRVM Y
Sbjct: 126 EPARSEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVY 185
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V Q
Sbjct: 186 KFHEDEHGEVVAESKRIDLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQ 245
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK--R 360
DE L + L GSTLRAPH CH QYM NM SIASL MAV++N +E+G R R
Sbjct: 246 DEALVQPVCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNSMR 305
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q EK +LRTQTLLCDML
Sbjct: 306 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSSEKRVLRTQTLLCDML 365
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
+RD+P GIVTQSP+IMDLVKCDGAAL Y+ + LGVTP + Q+ DI+ WL +H DSTG
Sbjct: 366 LRDSPTGIVTQSPSIMDLVKCDGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDSTG 425
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL DAGY GA +LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDD
Sbjct: 426 LSTDSLADAGYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDD 485
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
G++MHPRSSFKAFLEVVK+RS+ W + EMDAIHSLQLILR++FK+ D +H+ +
Sbjct: 486 GQRMHPRSSFKAFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENND-SKAVVHTHM 544
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
+L+++G+ EL +V EMVRLIETAT PI AVDV+G +NGWN K++ELTGL V+ A+GK
Sbjct: 545 AELELQGVDELSSVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGKS 604
Query: 661 FL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHD 719
L LV S +TV ++L AL+G+E++N++ +++T G + + ++VNAC+S+D +
Sbjct: 605 LLHDLVYKESQETVDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNACSSKDYTN 664
Query: 720 NVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMV 779
N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PN LIPPIF SD+ C EWN AM
Sbjct: 665 NIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCLEWNNAME 724
Query: 780 KLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFA 839
KL+GW R +VI KLL+ EVFG+ C+LK +A IVL+ A+ GQD ++ PF F
Sbjct: 725 KLSGWSRTDVIGKLLVGEVFGS---FCQLKGSDAMTKFMIVLHNALGGQDTDEFPFSFVD 781
Query: 840 RNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYT 899
R+GKY + L NK+++ +G + G FCFLQ+ S ELQQAL VQR + + R+K LAY
Sbjct: 782 RHGKYVQTFLTANKRVNIDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKELAYI 841
Query: 900 KRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDL 959
++++NPLSGI F+ ++E T L EQK+LL TSA C++Q+ KI+ D DLDSI DG L L
Sbjct: 842 CQEVKNPLSGIRFTNSLLESTCLTDEQKQLLETSAACEKQMLKIIRDIDLDSIDDGSLAL 901
Query: 960 EMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSIS 1019
E EF L V+ A +SQVM+ + ++++ + E+I + +YGD +R QQ LADFL
Sbjct: 902 EKQEFLLENVINAVVSQVMLLLRERNLQLIRDIPEEIKTLAVYGDQLRFQQALADFLMNV 961
Query: 1020 INFVPN 1025
+ + P+
Sbjct: 962 VRYAPS 967
>gi|315377406|gb|ADU05540.1| phytochrome A [Tovaria pendula]
Length = 598
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/598 (86%), Positives = 553/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
YKFH+DDHGEVVSEITK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 61 TYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKLPFDLTLCGSTLRAPHSCHLQYMENM+SIASLVMAVVVN+ +EE D + QK
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVVNEGDEESDAPNSAQAQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL+ QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELDNQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYKNKIWRLG+TP D QLHDI +WLS+YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKNKIWRLGITPTDSQLHDIAAWLSDYHRD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSLYDAG+ AL LGD VCGMAAVR++ KDMIFWFRS TA E++WGGAKHEP E
Sbjct: 301 STGLSTDSLYDAGFPQALTLGDAVCGMAAVRVTSKDMIFWFRSHTAGEIKWGGAKHEPGE 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KD+ RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D +TK +H
Sbjct: 361 KDNARKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDFNTKFLH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+GMKELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VDKAI
Sbjct: 421 SKLNDLKIDGMKELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDKAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
G HFLTLVEDSS+D VK+ML +ALQG+EEQN+QFEIKTHG++I+ PI+L+VNACASRDL
Sbjct: 481 GNHFLTLVEDSSVDRVKKMLDMALQGKEEQNVQFEIKTHGARIDAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
+NVVGVCFVAQD+T QK VMDKFTRIEGDYK I+QNPNP IPPIFGSDEFGWC EWN
Sbjct: 541 QENVVGVCFVAQDLTGQKNVMDKFTRIEGDYKVIIQNPNPXIPPIFGSDEFGWCTEWN 598
>gi|315377400|gb|ADU05537.1| phytochrome A [Koeberlinia spinosa]
Length = 598
Score = 1098 bits (2840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/598 (86%), Positives = 552/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTA GALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTATGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
YKFH+DDHGEVVSEITK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 61 TYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKLPFDLTLCGSTLRAPHSCHLQYMENM+SIASLVMAVVVN+ +EE D + QK
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVVNEGDEESDAPNSAQAQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL+ QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELDNQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYKNKIWRLG+TP D QLHDI +WLS+YH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKNKIWRLGITPTDSQLHDIAAWLSDYHRD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSLYDAG+ AL LGD VCGMAAVR++ KDMIFWFRS TA E++WGGAKHEP E
Sbjct: 301 STGLSTDSLYDAGFPQALTLGDAVCGMAAVRVTSKDMIFWFRSHTAGEIKWGGAKHEPGE 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KD+ RK HPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D +TK +H
Sbjct: 361 KDNARKTHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDFNTKFLH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+GMKELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VDKAI
Sbjct: 421 SKLNDLKIDGMKELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDKAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
G HFLTLVEDSS+D VK+ML +ALQG+EEQN+QFEIKTHG++I+ PI+L+VNACASRDL
Sbjct: 481 GNHFLTLVEDSSVDRVKKMLDMALQGKEEQNVQFEIKTHGARIDAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
+NVVGVCFVAQD+T QK VMDKFTRIEGDYKAI+QNPNP IPPIFGSDEFGWC EWN
Sbjct: 541 QENVVGVCFVAQDLTGQKNVMDKFTRIEGDYKAIIQNPNPSIPPIFGSDEFGWCTEWN 598
>gi|345424278|gb|AEN85243.1| phytochrome A, partial [Coincya longirostra]
Length = 599
Score = 1097 bits (2838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/599 (86%), Positives = 559/599 (93%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++FQLH+I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFQLHEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF+D T D++TK I
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424280|gb|AEN85244.1| phytochrome A, partial [Coincya longirostra]
Length = 595
Score = 1096 bits (2834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/595 (86%), Positives = 555/595 (93%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQDEKL FDLTLCGSTLRAPH+CHLQYM NM+SIASLVMAVVVN+EE + T QKRKR
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHTCHLQYMANMDSIASLVMAVVVNEEEADDSTTETQKRKR 180
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDML
Sbjct: 181 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++FQLH+I SWL EYH DSTG
Sbjct: 241 MRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFQLHEIASWLCEYHTDSTG 300
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+KDD
Sbjct: 301 LSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDD 360
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF+D T D++TK IHSKL
Sbjct: 361 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKIIHSKL 420
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AIGKH
Sbjct: 421 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIGKH 480
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
FLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDLH+N
Sbjct: 481 FLTLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHEN 540
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
VVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 VVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 595
>gi|345424276|gb|AEN85242.1| phytochrome A, partial [Coincya longirostra]
Length = 599
Score = 1096 bits (2834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/599 (86%), Positives = 558/599 (93%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVGV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++FQLH+I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFQLHEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF+D T D++TK I
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|89330092|emb|CAJ80958.1| phytochrome A [Paulownia tomentosa]
Length = 607
Score = 1095 bits (2833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/607 (84%), Positives = 564/607 (92%), Gaps = 1/607 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLI+DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV +EITK GLEPY GLHYPATDIPQAARFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLS 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HVKV+QDE LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+ V
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSAV 180
Query: 343 VNDEEEEG-DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 401
VN+ +EEG D++ P+KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE
Sbjct: 181 VNEGDEEGSDSSHPEKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 402 YQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPND 461
Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGAALLYKNK +RLG+TP+D
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYRLGLTPSD 300
Query: 462 FQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQ 521
FQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ KD +FWFRS
Sbjct: 301 FQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWFRSH 360
Query: 522 TASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 581
TA+E+RWGGAKHEP KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN
Sbjct: 361 TAAEIRWGGAKHEPGGKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 582 AFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGW 641
AFK+ DL +K+IH++L DL+IEG++ELEAVTSEMVRLIETA+VPILAVDVDGLVNGW
Sbjct: 421 AFKEAEDTDLGSKAIHTRLNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGW 480
Query: 642 NTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKIN 701
NTKIA+LTGL VDKAIG+HFL LVEDSS DTV +ML LALQG+EE+N+QFEIKTHG +
Sbjct: 481 NTKIADLTGLPVDKAIGRHFLALVEDSSADTVSKMLELALQGKEERNVQFEIKTHGPRSE 540
Query: 702 DDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPP 761
PI+L+VNACASRD+ +NVVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPNPLIPP
Sbjct: 541 SGPISLVVNACASRDVKENVVGVCFIAQDITAQKSMMDKFTRIEGDYRAIVQNPNPLIPP 600
Query: 762 IFGSDEF 768
IFG+DEF
Sbjct: 601 IFGTDEF 607
>gi|345424406|gb|AEN85307.1| phytochrome A, partial [Erucaria hispanica]
Length = 598
Score = 1091 bits (2821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/598 (85%), Positives = 556/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424334|gb|AEN85271.1| phytochrome A, partial [Didesmus aegyptius]
gi|345424336|gb|AEN85272.1| phytochrome A, partial [Didesmus aegyptius]
gi|345424338|gb|AEN85273.1| phytochrome A, partial [Didesmus bipinnatus]
gi|345424344|gb|AEN85276.1| phytochrome A, partial [Didesmus bipinnatus]
Length = 598
Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 556/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424424|gb|AEN85316.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 556/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPN+MDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNVMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424198|gb|AEN85203.1| phytochrome A, partial [Cakile arabica]
gi|345424416|gb|AEN85312.1| phytochrome A, partial [Erucaria ollivieri]
Length = 598
Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/598 (85%), Positives = 556/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|356532946|ref|XP_003535030.1| PREDICTED: phytochrome E-like [Glycine max]
Length = 1120
Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1057 (52%), Positives = 724/1057 (68%), Gaps = 40/1057 (3%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFE---TSGTSFDYSNSVRVSSTAGGD 58
S S A+S+ N+ + + ++AQ + DA++ A+FE SG SFDYS V
Sbjct: 13 SLSTSAESNMNSKRDK----ILAQYSADAEILAEFEQSGVSGKSFDYSRMVL-------- 60
Query: 59 QQPR--SDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS 116
PR S++ TAYL IQ+G LIQPFGC+LA++E TF++I +S+N +LL +
Sbjct: 61 DPPRLVSEQKMTAYLSKIQRGGLIQPFGCMLAIEESTFRIIGFSDNCFQLLGLERQ---- 116
Query: 117 VGDHPVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
+ +G IG D T+FT PS ++L KA E+SLLNPI V+ +T+ KPFYAI+HR+
Sbjct: 117 IDSKQFMGLIGVDATTLFTPPSGASLAKAAASREISLLNPIWVYARTTQKPFYAILHRID 176
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID EP + + ++ AGA+QS KLA +AI+RLQSLP + LCDT+++EV +LTG
Sbjct: 177 VGVVIDLEPARMSDPALSLAGAVQSQKLAVRAISRLQSLPGEDIGLLCDTVVEEVQKLTG 236
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM YKFHEDDHGEVVSEI +S LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A
Sbjct: 237 YDRVMVYKFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQASRFLFKQNRVRMICDCHA 296
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP 355
+ VKV+Q E+L L L STLR PH CH QYM NM SIASLVMA+VVN +
Sbjct: 297 KPVKVIQSEELRQPLCLVNSTLRLPHGCHTQYMANMGSIASLVMAIVVNGKHA------- 349
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
RLWGL+VCH+T+PR+V FP+RYACEFL Q F + + E++L Q+ EK IL+TQTL
Sbjct: 350 ---TRLWGLLVCHHTSPRYVSFPVRYACEFLMQAFGLQLYMEIQLASQMAEKRILKTQTL 406
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RDAPLGIV QSP+IMDLVKCDGAAL Y+ W LG TP + Q+ DI WL H
Sbjct: 407 LCDMLLRDAPLGIVNQSPSIMDLVKCDGAALYYEGNCWLLGTTPTEAQVKDIAEWLLSNH 466
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGL+ DSL DAGY GA +LGD VCGMA RI+ K +FWFRS TA EV+WGGAKH P
Sbjct: 467 GDSTGLTTDSLADAGYPGAASLGDAVCGMATARINSKHFLFWFRSHTAKEVKWGGAKHHP 526
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDDG KM+PRSSFKAFLEVVK++SLPW+ E++AIHSLQLI+R++F+D T +
Sbjct: 527 EDKDDGGKMNPRSSFKAFLEVVKSKSLPWEVPEINAIHSLQLIIRDSFQDTENTGPKTLT 586
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
K D GM EL +V EMVRLIETATVPI VD+ G++NGWNTKIAELTGL +
Sbjct: 587 YVQK-SDTATGGMDELSSVALEMVRLIETATVPIFGVDLGGVINGWNTKIAELTGLQASE 645
Query: 656 AIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+GK + ++ S DT K L ALQGQE++N++ +IK G + L+VNAC S
Sbjct: 646 AMGKSLVNEIIHADSCDTFKSTLSRALQGQEDKNVELKIKHFGLDQQQEVAYLVVNACTS 705
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RD D +VGVCFV QDIT +K V DKF ++EGDYKAI+Q+ +PLIPPIF SDE C EW
Sbjct: 706 RDHTDAIVGVCFVGQDITCEKVVQDKFIQLEGDYKAIIQSLSPLIPPIFSSDENACCSEW 765
Query: 775 NPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVP 834
N AM +LTGWKR+EVI KLL E+FG+ CRLK Q+ N I+L + +SGQD EK+P
Sbjct: 766 NAAMERLTGWKRDEVIGKLLPGEIFGS---FCRLKGQDTLTNFMILLYRGISGQDSEKIP 822
Query: 835 FGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLK 894
FGFF RNG++ E + NK++D G + G FCFLQ+ +L Q + + ++ K
Sbjct: 823 FGFFDRNGEFIETYITANKRIDTGGNMLGCFCFLQIVMPDLNQPSEEHKPRGRESISESK 882
Query: 895 ALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID 954
LAY ++++ PL+GI F+RK++E T + QK+ L TS C+RQ+ I++D++L SI +
Sbjct: 883 ELAYILQEMKKPLNGIRFTRKLLENTAVSENQKQFLDTSDACERQILAIIEDTNLGSINE 942
Query: 955 GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLAD 1014
G L L M EF L +L A +SQVMM K +++ +E ++I +LYGD IRLQ VL+D
Sbjct: 943 GTLQLNMEEFVLGNILDAIVSQVMMLIREKNLQLFHEIPDEIKMLSLYGDQIRLQVVLSD 1002
Query: 1015 FL--SISINFVPNGG-QLMVSSSLTKDQLGQSVHLAY 1048
FL +S PNG ++ +S LT + +HL +
Sbjct: 1003 FLLNVVSHTASPNGWVEIKISPGLTLQDGNEFIHLKF 1039
>gi|345424402|gb|AEN85305.1| phytochrome A, partial [Erucaria hispanica]
Length = 598
Score = 1089 bits (2817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 556/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424526|gb|AEN85367.1| phytochrome A, partial [Muricaria prostrata]
Length = 598
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPNSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPGDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P +
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPGD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK+IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424340|gb|AEN85274.1| phytochrome A, partial [Didesmus bipinnatus]
Length = 598
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI+ QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIIPQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424196|gb|AEN85202.1| phytochrome A, partial [Cakile arabica]
Length = 598
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 556/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGY RVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYGRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK+GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424326|gb|AEN85267.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 556/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTSPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424422|gb|AEN85315.1| phytochrome A, partial [Erucaria pinnata]
gi|345424426|gb|AEN85317.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 1088 bits (2814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHHDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD ++ PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSSAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424408|gb|AEN85308.1| phytochrome A, partial [Erucaria hispanica]
Length = 598
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVGV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|315377375|gb|ADU05525.1| phytochrome A [Cleome hassleriana]
Length = 598
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/598 (84%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITR Q+LPSGSM+RLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRSQTLPSGSMDRLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEV+SE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA+HVKV
Sbjct: 61 AYKFHDDDHGEVISEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKLPFDLTLCGSTLRAPHSCHLQYMENM+SIASLVMAVV N++E EGD + P K
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVFNEDEGEGDVPDSAPPHK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFL+QVFAIHV+KELELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLSQVFAIHVSKELELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYKNKIW+LG+TP DFQL DI SW+S+YH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIWKLGITPTDFQLQDIASWMSDYHRD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS +SLYDAG+ GALALGD VCGMAAVRI+ KDM+FWFRS TA E+RWGGAKH+PDE
Sbjct: 301 STGLSTESLYDAGFPGALALGDSVCGMAAVRITSKDMVFWFRSHTAGEIRWGGAKHDPDE 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD RKMHPRSSFKAFLEVVKTR PWKDYEMDAIHSLQLILRN FK+ +D++T +H
Sbjct: 361 KDDSRKMHPRSSFKAFLEVVKTRCTPWKDYEMDAIHSLQLILRNTFKETDIIDVNTNVLH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLK++G++ELEAVTSEMVRLIETATVPILAVD DG +NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKLDGIQELEAVTSEMVRLIETATVPILAVDADGSINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GK+F TLVEDSS++ VK+ML +AL+G EEQN+QFEIKTHGS+++ PI+L+VNACASRDL
Sbjct: 481 GKNFPTLVEDSSVERVKKMLEMALEGTEEQNVQFEIKTHGSRVDAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVAQD+T QK VMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAQDLTAQKNVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 598
>gi|345424332|gb|AEN85270.1| phytochrome A, partial [Didesmus aegyptius]
Length = 597
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/597 (85%), Positives = 555/597 (92%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424428|gb|AEN85318.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHHDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPN+MDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNVMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++T+ IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTRIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424192|gb|AEN85200.1| phytochrome A, partial [Cakile arabica]
Length = 598
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEGGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKN LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNTLRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHAD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424418|gb|AEN85313.1| phytochrome A, partial [Erucaria ollivieri]
Length = 598
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFW RS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWVRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424502|gb|AEN85355.1| phytochrome A, partial [Kremeriella cordylocarpus]
Length = 599
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/599 (85%), Positives = 556/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK+GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQ
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPN+MDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNVMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 YSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424330|gb|AEN85269.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/598 (85%), Positives = 556/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTSPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC +WN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSDWN 598
>gi|345424420|gb|AEN85314.1| phytochrome A, partial [Erucaria ollivieri]
Length = 598
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEK FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKPSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424194|gb|AEN85201.1| phytochrome A, partial [Cakile arabica]
Length = 598
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF+D T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPI AVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPISAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424536|gb|AEN85372.1| phytochrome A, partial [Psychine stylosa]
Length = 598
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSPTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEATDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VE+SS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTVVEESSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424410|gb|AEN85309.1| phytochrome A, partial [Erucaria microcarpa]
Length = 598
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/598 (85%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYP TDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPTTDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPTDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424524|gb|AEN85366.1| phytochrome A, partial [Muricaria prostrata]
Length = 597
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/597 (85%), Positives = 554/597 (92%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPNSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPGDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P +
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPGD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK+IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424324|gb|AEN85266.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH L LVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLALVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424414|gb|AEN85311.1| phytochrome A, partial [Erucaria microcarpa]
Length = 598
Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/597 (85%), Positives = 554/597 (92%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPTDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424342|gb|AEN85275.1| phytochrome A, partial [Didesmus bipinnatus]
Length = 598
Score = 1086 bits (2808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/597 (85%), Positives = 554/597 (92%), Gaps = 3/597 (0%)
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMA
Sbjct: 2 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 61
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VL
Sbjct: 62 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 121
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQKR 358
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQKR
Sbjct: 122 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKR 181
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCD
Sbjct: 182 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCD 241
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
MLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH DS
Sbjct: 242 MLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTDS 301
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL+DAG+ AL+LGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+K
Sbjct: 302 TGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDDK 361
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK IHS
Sbjct: 362 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIHS 421
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
KL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AIG
Sbjct: 422 KLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIG 481
Query: 659 KHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLH 718
KH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDLH
Sbjct: 482 KHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLH 541
Query: 719 DNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
+NVVGVCF A D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 542 ENVVGVCFAAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424412|gb|AEN85310.1| phytochrome A, partial [Erucaria microcarpa]
Length = 598
Score = 1086 bits (2808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+Q+VFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQKVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHN +PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNASPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPTDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424404|gb|AEN85306.1| phytochrome A, partial [Erucaria hispanica]
Length = 597
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/597 (85%), Positives = 555/597 (92%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM++EVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVREVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|255557437|ref|XP_002519749.1| phytochrome B, putative [Ricinus communis]
gi|223541166|gb|EEF42722.1| phytochrome B, putative [Ricinus communis]
Length = 1131
Score = 1084 bits (2804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/1025 (52%), Positives = 719/1025 (70%), Gaps = 36/1025 (3%)
Query: 7 AQSSSNTGKSRHSARVIAQTTIDAKLHADFE---TSGTSFDYSNSVRVSSTAGGDQQPRS 63
A +S NT IAQ DA L A+FE SG SF+YS SV + ++Q
Sbjct: 26 ATNSENTA-------TIAQYNADAGLLAEFEQSGVSGKSFNYSRSVLSAPHNVPEEQ--- 75
Query: 64 DRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVL 123
TAYL IQ+G LIQPFGC++A++E TF++I+YSEN LL + +V + + V
Sbjct: 76 ---ITAYLSRIQRGGLIQPFGCMVAIEEPTFRIISYSENCFHLLGLSASSV--LESNQVK 130
Query: 124 G-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182
G IG D++ +FT S ++L KA E+S+LNPI V+ +TS KPFYAI+HR+ ++ID
Sbjct: 131 GLIGIDVRALFTPQSGASLSKAAASREISMLNPIWVYSRTSQKPFYAILHRIDVGIVIDL 190
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EP + + ++ AGA+QS KLA +AI+RLQSLP G + LCDT++++V +LTGYDRVM Y
Sbjct: 191 EPARSGDPVLSLAGAVQSQKLAVRAISRLQSLPGGDIGMLCDTVVEDVQKLTGYDRVMVY 250
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFH+DDHGEV+SEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A V+V+Q
Sbjct: 251 KFHDDDHGEVLSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHANPVRVIQ 310
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLW 362
E+L L L STLR+PH CH QYM NM SIASLVMAVV+N D+T +LW
Sbjct: 311 SEELKHPLCLVNSTLRSPHGCHTQYMANMGSIASLVMAVVING----NDST------KLW 360
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVVCH+T+PR+VPFPLRYACEFL Q F + + EL+L +++EK IL+TQTLLCDML+R
Sbjct: 361 GLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLAAKLVEKKILQTQTLLCDMLLR 420
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
DAP GIVTQSP+IMDLVKCDGAAL Y+ K W LG+TP + Q+ DI WL H DSTGL+
Sbjct: 421 DAPFGIVTQSPSIMDLVKCDGAALYYRGKCWLLGITPTESQVKDIADWLLNNHGDSTGLT 480
Query: 483 ADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
DSL DAGY GAL LGD VCGMA RI+ +D +FWFRS TA E++WGGAKH P++KDDG+
Sbjct: 481 TDSLADAGYPGALLLGDAVCGMATARITSRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ 540
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLC 601
+MHPRSSF AFLEVVK+RS+PW+ E++AIHSLQLI+R++F+D+ D +K+ ++++
Sbjct: 541 RMHPRSSFNAFLEVVKSRSMPWEVSEINAIHSLQLIMRDSFQDME--DSASKAMVNAQQT 598
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
D ++G+ EL +V EMVRLIETAT PI VD G VNGWN KIAELTGL +A+GK
Sbjct: 599 DTDVQGIDELSSVACEMVRLIETATAPIFGVDSAGSVNGWNAKIAELTGLQASEAMGKSL 658
Query: 662 L-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ +V S + V+ +L ALQG+E++N++ +++ G + + ++ NAC SRD +N
Sbjct: 659 VREVVHKDSYEFVESLLCRALQGEEDKNVELKLRKFGLHQQNSAVFVVANACTSRDYANN 718
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVK 780
V+GVCFV QD+T +K VMDKF R++GDYK I+++ NPLIPPIF SDE CCEWN AM +
Sbjct: 719 VIGVCFVGQDVTSEKIVMDKFLRLQGDYKVIIESLNPLIPPIFASDENACCCEWNAAMER 778
Query: 781 LTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFAR 840
LTG R+EVI K+L E+FG CRLK+Q+ I+L + +S QD +K PFGFF R
Sbjct: 779 LTGRTRQEVIGKMLPGEIFG---GLCRLKDQDTLTKFMILLYRGLSDQDTDKFPFGFFNR 835
Query: 841 NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK 900
GK+ E L NK+ D +G G FCFLQ+ +LQQ L + +Q +L +LK LAY +
Sbjct: 836 QGKFVEVFLTANKRTDADGKTIGCFCFLQVIGPDLQQTLDEHKQEDQESLLKLKQLAYIR 895
Query: 901 RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLE 960
++++PLSGI F+ K++E T QK+ L TS C++Q+ I++D DL + +G ++L+
Sbjct: 896 EEMKSPLSGIRFTHKLLEDTATSEHQKQFLETSDACEKQIMTIIEDIDLAKLEEGKIELK 955
Query: 961 MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI 1020
+ EF L VL A +SQ+M+ + I++ +E E+I + ++YGD IRLQ VL+DFL +
Sbjct: 956 VEEFFLVNVLDAIVSQIMLLLRERSIQLFHEIPEEIKTVSVYGDQIRLQLVLSDFLLSVV 1015
Query: 1021 NFVPN 1025
P+
Sbjct: 1016 RHAPS 1020
>gi|345424204|gb|AEN85206.1| phytochrome A, partial [Cakile arctica]
gi|345424232|gb|AEN85220.1| phytochrome A, partial [Cakile edentula]
gi|345424236|gb|AEN85222.1| phytochrome A, partial [Cakile edentula]
gi|345424240|gb|AEN85224.1| phytochrome A, partial [Cakile edentula]
Length = 598
Score = 1084 bits (2803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 553/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424202|gb|AEN85205.1| phytochrome A, partial [Cakile arctica]
gi|345424206|gb|AEN85207.1| phytochrome A, partial [Cakile constricta]
gi|345424216|gb|AEN85212.1| phytochrome A, partial [Cakile constricta]
gi|345424220|gb|AEN85214.1| phytochrome A, partial [Cakile constricta]
gi|345424224|gb|AEN85216.1| phytochrome A, partial [Cakile edentula]
gi|345424230|gb|AEN85219.1| phytochrome A, partial [Cakile edentula]
gi|345424252|gb|AEN85230.1| phytochrome A, partial [Cakile lanceolata]
gi|345424256|gb|AEN85232.1| phytochrome A, partial [Cakile lanceolata]
gi|345424258|gb|AEN85233.1| phytochrome A, partial [Cakile lanceolata]
gi|345424274|gb|AEN85241.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 553/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424394|gb|AEN85301.1| phytochrome A, partial [Erucaria erucarioides]
gi|345424398|gb|AEN85303.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 556/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDE--EEEG-DNTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E EE+G D+T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LGVTP+D+ L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++T IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424260|gb|AEN85234.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 553/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLREIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424328|gb|AEN85268.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 1082 bits (2799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/598 (84%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EK+ILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKDILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH L LVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLALVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDK TRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKLTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424210|gb|AEN85209.1| phytochrome A, partial [Cakile constricta]
Length = 598
Score = 1082 bits (2799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/598 (84%), Positives = 553/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
G+H LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GRHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424246|gb|AEN85227.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/598 (84%), Positives = 552/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS T EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTTGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424242|gb|AEN85225.1| phytochrome A, partial [Cakile edentula]
Length = 598
Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 552/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAEHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADVGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|315377363|gb|ADU05519.1| phytochrome A [Camelina hispida]
Length = 599
Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/599 (85%), Positives = 550/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++ D R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRGDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKT ++ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTQLTRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424218|gb|AEN85213.1| phytochrome A, partial [Cakile constricta]
Length = 598
Score = 1082 bits (2797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/598 (84%), Positives = 552/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGA LLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAVLLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424234|gb|AEN85221.1| phytochrome A, partial [Cakile edentula]
Length = 598
Score = 1082 bits (2797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/598 (84%), Positives = 552/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNI RTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNISRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424272|gb|AEN85240.1| phytochrome A, partial [Cakile maritima]
Length = 597
Score = 1082 bits (2797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/597 (85%), Positives = 552/597 (92%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424282|gb|AEN85245.1| phytochrome A, partial [Coincya monensis]
gi|345424284|gb|AEN85246.1| phytochrome A, partial [Coincya monensis]
gi|345424288|gb|AEN85248.1| phytochrome A, partial [Coincya monensis]
Length = 599
Score = 1081 bits (2796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/599 (85%), Positives = 552/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSL SGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLSSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K W+LG+TP++F LH+I SWL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKAWKLGITPSEFHLHEIASWLCESHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF+D T D++TK I
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELT L VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTDLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALDGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424214|gb|AEN85211.1| phytochrome A, partial [Cakile constricta]
Length = 598
Score = 1081 bits (2796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/598 (84%), Positives = 552/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVV TRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVXTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424270|gb|AEN85239.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/598 (84%), Positives = 552/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAP SCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPRSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424250|gb|AEN85229.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/598 (84%), Positives = 552/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCD M+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDMMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|10639836|emb|CAC11136.1| phytochrome N [Pinus sylvestris]
Length = 876
Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/809 (64%), Positives = 637/809 (78%), Gaps = 5/809 (0%)
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
DDHGEV+SE+ + LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A+ V V+QDE+L
Sbjct: 1 DDHGEVISEMRRYDLEPYLGLHYPATDIPQASRFLFMRNRVRMICDCYAQPVAVIQDERL 60
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGL 364
P DL+ CGSTLRAPH CH QYM NM SIASLVMAVV+N++E +GD+ + QK +RLWGL
Sbjct: 61 PRDLSFCGSTLRAPHGCHAQYMANMGSIASLVMAVVINEKELDGDSEGQMQQKGRRLWGL 120
Query: 365 VVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA 424
VVCH+T+PR+VPFPLRYACEFL QVF I +NKE+EL QI EK ILRTQTLLCDML+RD
Sbjct: 121 VVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKEVELAAQIREKQILRTQTLLCDMLLRDT 180
Query: 425 PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSAD 484
PLGIVTQ PNIMDLV+CDGAAL Y+ W LGVTP + Q+ DIV+WLSE+HMDSTGLS D
Sbjct: 181 PLGIVTQKPNIMDLVRCDGAALYYERNFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTD 240
Query: 485 SLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKM 544
SL AGY GA +LG+ VCG+AAVRI+ KD +FWFRS TA E++WGGAKH+ E+DDG+KM
Sbjct: 241 SLVYAGYPGAESLGNAVCGIAAVRINSKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKM 300
Query: 545 HPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLK 604
HPRSSF AFLEVVK RSL W+D EMDAIHSLQLILR + K+ + SI+ +L DLK
Sbjct: 301 HPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQLILRGSRKETDGSGRNI-SINRQLNDLK 359
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTL 664
++ M EL AVT+EMVRLIETAT PILAVD G+VNGWN K AELTGLSV++ +G+ + L
Sbjct: 360 LQEMDELNAVTNEMVRLIETATAPILAVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINL 419
Query: 665 VEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGV 724
VE++S + VKRML+LALQG EEQN+Q E+K HGS+ + P+ L+VNAC+SRDL +NVVGV
Sbjct: 420 VEETSAENVKRMLHLALQGVEEQNVQIELKRHGSEEDKGPVVLLVNACSSRDLKENVVGV 479
Query: 725 CFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGW 784
CFVAQD+T QK VMDKFTRI+GDY+AIVQNP+PLIPPIFG+DE G C N AM KL+GW
Sbjct: 480 CFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSPLIPPIFGTDECG-CVPENSAMEKLSGW 538
Query: 785 KREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKY 844
KREE+IDK+LL EVFGT ACCRLK Q A L I+LN +M+GQ+ EK PFGFF R+GKY
Sbjct: 539 KREEIIDKMLLGEVFGTRTACCRLKGQNALTQLRIILNSSMTGQETEKFPFGFFDRHGKY 598
Query: 845 AECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIR 904
E LL NKKLD EG +TGVFCFL +AS ELQQAL+VQ + EQ A+KRL+AL Y + +I+
Sbjct: 599 VETLLSANKKLDEEGKITGVFCFLHIASPELQQALYVQHMLEQAAMKRLQALTYLRLEIK 658
Query: 905 NPLSGIIFSRKMMEGTE-LGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
NPL GI+F++KMME T+ L +Q++L+ TSA CQ+Q+ KILDD DL+SI D YLDL+ VE
Sbjct: 659 NPLYGIMFTQKMMERTDFLREDQRQLVETSALCQKQILKILDDMDLESIEDRYLDLDTVE 718
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
FTL +L A ISQ M++S KG+ I + +I + LYGD RLQQ+LA+FL I F
Sbjct: 719 FTLGALLDAVISQGMIQSEEKGLEIGYDLPREITTTGLYGDQSRLQQILANFLVTVIQFT 778
Query: 1024 PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
P + + S TK LG V++ +E R
Sbjct: 779 PAEKWVRIKVSPTKRHLGGGVYVIGIEFR 807
>gi|345424222|gb|AEN85215.1| phytochrome A, partial [Cakile constricta]
gi|345424228|gb|AEN85218.1| phytochrome A, partial [Cakile edentula]
gi|345424254|gb|AEN85231.1| phytochrome A, partial [Cakile lanceolata]
gi|345424264|gb|AEN85236.1| phytochrome A, partial [Cakile maritima]
Length = 597
Score = 1080 bits (2794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/597 (85%), Positives = 552/597 (92%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424400|gb|AEN85304.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 1080 bits (2794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/598 (85%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDE--EEEG-DNTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E EE+G D+T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI +QSPNIMDLVKCDGAALLYK+K+W+LGVTP+D+ L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGITSQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQ ILRNAFKD T D++T IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQFILRNAFKDGETTDVNTTIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424244|gb|AEN85226.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 1080 bits (2793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/598 (84%), Positives = 552/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+ EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALERTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424262|gb|AEN85235.1| phytochrome A, partial [Cakile maritima]
Length = 598
Score = 1080 bits (2793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/598 (84%), Positives = 552/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT++QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+N VGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENAVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424266|gb|AEN85237.1| phytochrome A, partial [Cakile maritima]
Length = 597
Score = 1079 bits (2790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/597 (84%), Positives = 551/597 (92%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAAL YK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALSYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424200|gb|AEN85204.1| phytochrome A, partial [Cakile arctica]
Length = 597
Score = 1079 bits (2790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/597 (84%), Positives = 551/597 (92%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIFQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424378|gb|AEN85293.1| phytochrome A, partial [Erucaria cakiloidea]
Length = 598
Score = 1078 bits (2788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/598 (84%), Positives = 553/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKF +DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFRDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGNDPDSTSPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLREIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVK RSL WKDYEMDAIHSLQLILRNAFKD T D++T IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLAWKDYEMDAIHSLQLILRNAFKDGETTDVNTNIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G E+QN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEDQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424248|gb|AEN85228.1| phytochrome A, partial [Cakile lanceolata]
Length = 598
Score = 1078 bits (2787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/598 (84%), Positives = 551/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGS LRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSALRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLM DAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMCDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424506|gb|AEN85357.1| phytochrome A, partial [Moricandia arvensis]
Length = 598
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/598 (86%), Positives = 557/598 (93%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+K+WRLG+TP+DF L +I SWLSEYH D
Sbjct: 241 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWRLGITPSDFHLQEIASWLSEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVERVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424226|gb|AEN85217.1| phytochrome A, partial [Cakile edentula]
Length = 596
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/596 (84%), Positives = 550/596 (92%), Gaps = 3/596 (0%)
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAY
Sbjct: 1 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAY 60
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VLQ
Sbjct: 61 KFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVLQ 120
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQKRK 359
DEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQKRK
Sbjct: 121 DEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKRK 180
Query: 360 RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDM 419
RLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDM
Sbjct: 181 RLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDM 240
Query: 420 LMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDST 479
LMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH DST
Sbjct: 241 LMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTDST 300
Query: 480 GLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKD 539
GLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+KD
Sbjct: 301 GLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDDKD 360
Query: 540 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSK 599
D R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IHSK
Sbjct: 361 DARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIHSK 420
Query: 600 LCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGK 659
L DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AIGK
Sbjct: 421 LNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAIGK 480
Query: 660 HFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHD 719
H LTL EDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDLH+
Sbjct: 481 HLLTLAEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHE 540
Query: 720 NVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 NVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 596
>gi|89331117|emb|CAJ80925.1| phytochrome A [Lamium purpureum]
Length = 608
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/608 (82%), Positives = 556/608 (91%), Gaps = 2/608 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAI RLQSLPSGS+ERL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAINRLQSLPSGSIERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFHEDDHGEV +EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMVYKFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HVKV+QD LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRATHVKVIQDGNLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VN--DEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN DEE G ++ P+KRKRLWGLVVCH+TTPRFVPFPLRYACEFLAQVFAIHVNKE EL
Sbjct: 181 VNEGDEEGSGSDSPPEKRKRLWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGAALLYK K +RLG+TP
Sbjct: 241 ESQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKGKKYRLGMTPT 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ D+VSWL EYH DSTGLS DSLYDAG+ GALALGD +CGMAAV+I+ KD +FWFRS
Sbjct: 301 DFQIRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TASEVRWGGAKHEP EKDDGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILR
Sbjct: 361 HTASEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILR 420
Query: 581 NAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNG 640
NAFK+ G D++ ++IH KL DL+I+G++ELEAVTSEMVRLIETA+VPILAVDVDGLVNG
Sbjct: 421 NAFKESGGTDVEARAIHMKLSDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNG 480
Query: 641 WNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKI 700
WNTKIA+LTGLSVDKAIG+HFL LVEDSS TV +ML LAL+G EE N+QFE+K HG
Sbjct: 481 WNTKIADLTGLSVDKAIGRHFLDLVEDSSAHTVNQMLKLALEGNEEHNVQFELKNHGEMT 540
Query: 701 NDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIP 760
PI+L+VNACASRD+ ++VVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPNPLIP
Sbjct: 541 EAGPISLVVNACASRDVKESVVGVCFIAQDITAQKSMMDKFTRIEGDYRAIVQNPNPLIP 600
Query: 761 PIFGSDEF 768
PIFG+DEF
Sbjct: 601 PIFGTDEF 608
>gi|89330108|emb|CAJ80966.1| phytochrome A [Penstemon cobaea]
Length = 607
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/607 (82%), Positives = 561/607 (92%), Gaps = 1/607 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV SE+TK G EPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFSEVTKPGHEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA+HVKV+QDEKL FDLTLCGSTLRAPH CHLQYMENM+SIASLVM+VV
Sbjct: 121 MKNKVRMICDCRAKHVKVVQDEKLSFDLTLCGSTLRAPHGCHLQYMENMSSIASLVMSVV 180
Query: 343 VNDEEEEG-DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 401
VN+ +E+G D+ +PQKRKRLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELE
Sbjct: 181 VNEGDEDGPDSVIPQKRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 402 YQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPND 461
Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGAAL+YKNK +++G+TP D
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALMYKNKKYKMGLTPTD 300
Query: 462 FQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQ 521
FQ+ DIVSWL YH DSTGLS DSLYDAGY GALALGD VCGMAAV+IS +D +FWFRS
Sbjct: 301 FQIRDIVSWLDAYHRDSTGLSTDSLYDAGYPGALALGDAVCGMAAVKISDEDWLFWFRSH 360
Query: 522 TASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 581
TA+E+RWGGAKHE EKDDGRKMHPRSSFKAFLEVVKTRSLP+KDYEMDAIHSLQLILRN
Sbjct: 361 TAAEIRWGGAKHEQGEKDDGRKMHPRSSFKAFLEVVKTRSLPFKDYEMDAIHSLQLILRN 420
Query: 582 AFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGW 641
AFKD + DTK+IH++L DL+I+GM+ELEAVTSEMVRLIETA+VPILAVDV+G VNGW
Sbjct: 421 AFKDGENAEADTKAIHTRLTDLRIDGMQELEAVTSEMVRLIETASVPILAVDVEGYVNGW 480
Query: 642 NTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKIN 701
N+KIA+LTGL VD+AIGK FL LVEDSS D+V +ML LALQG+EEQN+QFEIKTHG + +
Sbjct: 481 NSKIADLTGLRVDEAIGKQFLELVEDSSTDSVSKMLKLALQGKEEQNVQFEIKTHGQRSD 540
Query: 702 DDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPP 761
PITL+VNACAS+D+ +NVVGVCF+AQDIT K +MDKFTRIEGDYKAIVQNPNPLIPP
Sbjct: 541 SGPITLVVNACASKDVKENVVGVCFIAQDITAHKNMMDKFTRIEGDYKAIVQNPNPLIPP 600
Query: 762 IFGSDEF 768
IFG+DEF
Sbjct: 601 IFGTDEF 607
>gi|345424238|gb|AEN85223.1| phytochrome A, partial [Cakile edentula]
Length = 598
Score = 1077 bits (2785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/597 (84%), Positives = 551/597 (92%), Gaps = 3/597 (0%)
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM++EVFELTGYDRVMA
Sbjct: 2 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVREVFELTGYDRVMA 61
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VL
Sbjct: 62 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 121
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQKR 358
QDEKL FDLTLCGSTLRAPHSC LQYM NM+SIASLVMAVVVN+E+ EGD +T PQKR
Sbjct: 122 QDEKLSFDLTLCGSTLRAPHSCRLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKR 181
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCD
Sbjct: 182 KRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCD 241
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
MLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH DS
Sbjct: 242 MLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTDS 301
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+K
Sbjct: 302 TGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDDK 361
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IHS
Sbjct: 362 DDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIHS 421
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
KL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AIG
Sbjct: 422 KLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAIG 481
Query: 659 KHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLH 718
KH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDLH
Sbjct: 482 KHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLH 541
Query: 719 DNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 542 ENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424286|gb|AEN85247.1| phytochrome A, partial [Coincya monensis]
Length = 599
Score = 1077 bits (2784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/599 (84%), Positives = 550/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAI RLQSL SGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAIIRLQSLSSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K W+LG+TP++F LH+I SWL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKAWKLGITPSEFHLHEIASWLCESHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKA LEVVKTRSLPWKDYEMDAIHSLQLILRNAF+D T D++TK I
Sbjct: 361 DKDDARRMHPRSSFKALLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELT L VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTDLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALDGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424396|gb|AEN85302.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/598 (84%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT++QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDE--EEEG-DNTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E EE+G D+T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LGVTP+D+ L ++ SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEVASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++T IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q PNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQIPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424212|gb|AEN85210.1| phytochrome A, partial [Cakile constricta]
Length = 597
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/597 (84%), Positives = 551/597 (92%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFG C EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGGCSEW 597
>gi|345424556|gb|AEN85382.1| phytochrome A, partial [Rytidocarpus moricandioides]
gi|345424558|gb|AEN85383.1| phytochrome A, partial [Rytidocarpus moricandioides]
gi|345424562|gb|AEN85385.1| phytochrome A, partial [Rytidocarpus moricandioides]
Length = 598
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/598 (86%), Positives = 557/598 (93%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331027|emb|CAJ80880.1| phytochrome A [Ajuga reptans]
Length = 608
Score = 1075 bits (2780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/608 (82%), Positives = 555/608 (91%), Gaps = 2/608 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV +E+TK LEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFAEVTKPDLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DC+A HVKV+QDE LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCKANHVKVVQDENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEG--DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ EEG ++T P+KRKRLWGLVVCH T+PRFVPFPLRYACEFLAQVFAIHVNKELEL
Sbjct: 181 VNEGNEEGGSESTHPEKRKRLWGLVVCHLTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q++EKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGAALLYKNK ++LG+TP
Sbjct: 241 ENQMMEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYKLGLTPT 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ D+VSWL EYH DSTGLS DSLYDAG+ GALALG VCGMAAV+I+ KD +FWFRS
Sbjct: 301 DFQIRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGHAVCGMAAVKINDKDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TASE+RWGGAKHEP EKDDGRKMHPRSSF+AFLE VKTRSLPWKDYEMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHEPGEKDDGRKMHPRSSFRAFLEAVKTRSLPWKDYEMDAIHSLQLILR 420
Query: 581 NAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNG 640
NAFK+ D DTK IH+KL DL+I+G++ELEAVTSEMVRLIETA+VPILAVD DGLVNG
Sbjct: 421 NAFKEADDKDTDTKMIHTKLNDLQIDGIQELEAVTSEMVRLIETASVPILAVDADGLVNG 480
Query: 641 WNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKI 700
WNTKIA+LT L VDKAIG+HFL LVED+S D V ML LALQG+EEQN+QFEIKTHG
Sbjct: 481 WNTKIADLTSLPVDKAIGRHFLDLVEDTSADIVSHMLQLALQGKEEQNVQFEIKTHGENS 540
Query: 701 NDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIP 760
P+TLIVNACASRD+ +NVVGVCF+AQDIT QK++MDKFTRIEGDY+AI+QNPNPLIP
Sbjct: 541 ESGPVTLIVNACASRDVKENVVGVCFIAQDITAQKSMMDKFTRIEGDYRAIIQNPNPLIP 600
Query: 761 PIFGSDEF 768
PIFG+DEF
Sbjct: 601 PIFGTDEF 608
>gi|345424380|gb|AEN85294.1| phytochrome A, partial [Erucaria cakiloidea]
Length = 597
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/597 (84%), Positives = 551/597 (92%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN---TLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD+ T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDDPDSTSPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL LGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALPLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVK RSL WKDYEMDAIHSLQLILR+AFKD T D++T IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLAWKDYEMDAIHSLQLILRDAFKDGETTDVNTNIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G E+QN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEDQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
H NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 HGNVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424582|gb|AEN85395.1| phytochrome A, partial [Stanleya pinnata]
Length = 597
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/597 (84%), Positives = 549/597 (91%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
M MRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL E H D
Sbjct: 241 GMPMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCENHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHNPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGDTTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIA LTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAVLTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS++TVKRML AL+G EEQN+QFEIKTH S + PI+L+VNAC SRDL
Sbjct: 481 GKHLLTIVEDSSVETVKRMLENALEGTEEQNVQFEIKTHLSSADAGPISLVVNACTSRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424564|gb|AEN85386.1| phytochrome A, partial [Schouwia purpurea]
gi|345424566|gb|AEN85387.1| phytochrome A, partial [Schouwia purpurea]
Length = 598
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/598 (86%), Positives = 556/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHMSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|315377373|gb|ADU05524.1| phytochrome A [Pachycladon stellatum]
Length = 599
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/599 (84%), Positives = 551/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSVERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSSTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAAL YK+KIW+LG+TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKDKIWKLGITPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL++GD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+ +
Sbjct: 301 DSTGLSTDSLHDAGFPKALSIGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDSN 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDCETTDVNTKLI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH L LVEDSS++ V+RML AL+G EEQN+QFEIKTH S+ + PI+LIVNAC SRD
Sbjct: 481 IGKHLLILVEDSSVEIVERMLENALEGTEEQNVQFEIKTHLSRADAGPISLIVNACTSRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGW EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWSTEWN 599
>gi|345424372|gb|AEN85290.1| phytochrome A, partial [Eruca vesicaria]
Length = 592
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/595 (85%), Positives = 548/595 (92%), Gaps = 3/595 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN EE+E ++ PQKRKR
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVN-EEDEPESATPQKRKR 179
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+E+E QI+EKNILRTQTLLCDML
Sbjct: 180 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVEMENQIVEKNILRTQTLLCDML 239
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG TP++F L +I SWL EYH DSTG
Sbjct: 240 MRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQEIASWLCEYHTDSTG 299
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+KDD
Sbjct: 300 LSTDSLHDAGF--PRDLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDD 357
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK+ T D++TK IHSKL
Sbjct: 358 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGETTDVNTKIIHSKL 417
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD AIGKH
Sbjct: 418 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDGAIGKH 477
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
LTLVEDSS++ VKRML AL+G EEQN+QF+IKTH S+ + PI+ +VNACASRDLH+N
Sbjct: 478 LLTLVEDSSVEVVKRMLENALEGTEEQNVQFDIKTHLSRTDAGPISFVVNACASRDLHEN 537
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
VVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 538 VVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 592
>gi|345424392|gb|AEN85300.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/598 (84%), Positives = 553/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDE--EEEG-DNTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E EE+G D+T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LGVTP+D+ L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMA VRI+ KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMATVRITSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++T IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFT IEGD KAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTSIEGDCKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331043|emb|CAJ80888.1| phytochrome A [Boschniakia hookeri]
Length = 615
Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/615 (81%), Positives = 556/615 (90%), Gaps = 2/615 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LP GSMERL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPGGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV +EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVSTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HVKV+QDE L FDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEG--DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ E+G +++P KRK LWGLVVCHNT+PRFVPFPLRYACEFLAQVFAI+VNKE EL
Sbjct: 181 VNEGNEDGPDSSSVPDKRKTLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIYVNKEFEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCD+L+RDAPLGIV+QSPN+MDLVKCDGA LLYKN +RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKNTKYRLGLTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GAL+L D VCGM AVRI+ +D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLCDAVCGMVAVRITERDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA+E++WGGAKHEP E DDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILR
Sbjct: 361 HTAAEIQWGGAKHEPGETDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 581 NAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNG 640
NAFK+ D +++ IH++L DL+I+G++E+EAVTSEMVRLIETA+VPI AVDVDGLVNG
Sbjct: 421 NAFKESEGRDSESREIHARLHDLQIDGVREIEAVTSEMVRLIETASVPIFAVDVDGLVNG 480
Query: 641 WNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKI 700
WNTKIA+LTGL VDKAIG HFL LVEDSS DTV +ML LALQG+EEQN+QFEIKTHG
Sbjct: 481 WNTKIADLTGLCVDKAIGWHFLALVEDSSADTVSKMLELALQGKEEQNVQFEIKTHGQTS 540
Query: 701 NDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIP 760
PITLIVNACASRD+ NVVGVCF+AQDIT QK +MDKFTRIEGDY+ IVQNPNPLIP
Sbjct: 541 ESGPITLIVNACASRDVKGNVVGVCFIAQDITTQKIMMDKFTRIEGDYRTIVQNPNPLIP 600
Query: 761 PIFGSDEFGWCCEWN 775
PIFG+DEFGWC EWN
Sbjct: 601 PIFGTDEFGWCSEWN 615
>gi|345424610|gb|AEN85409.1| phytochrome A, partial [Zilla spinosa]
gi|345424612|gb|AEN85410.1| phytochrome A, partial [Zilla spinosa]
Length = 598
Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/598 (85%), Positives = 557/598 (93%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++TVKRML AL+G EEQN+QFEIKTH ++ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVETVKRMLENALEGTEEQNVQFEIKTHLARADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424606|gb|AEN85407.1| phytochrome A, partial [Zilla spinosa]
Length = 598
Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/598 (85%), Positives = 557/598 (93%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS++TVKRML AL+G EEQN+QFEIKTH ++ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTIVEDSSVETVKRMLENALEGTEEQNVQFEIKTHLARADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424508|gb|AEN85358.1| phytochrome A, partial [Moricandia arvensis]
Length = 598
Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGE VSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEAVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+K+WRLG+TP+D L +I SWLSEYH D
Sbjct: 241 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWRLGITPSDLHLQEIASWLSEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVERVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424390|gb|AEN85299.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/598 (84%), Positives = 553/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSG MERLCDTM+QE FELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGIMERLCDTMVQEAFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDE--EEEG-DNTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E EE+G D+T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LGVTP+D+ L +I S L EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASRLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++T IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424290|gb|AEN85249.1| phytochrome A, partial [Coincya rupestris]
Length = 598
Score = 1073 bits (2774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/598 (85%), Positives = 557/598 (93%), Gaps = 4/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD ++ PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSSAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F LH+I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLHEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 598
>gi|89331107|emb|CAJ80920.1| phytochrome A [Glechoma hederacea]
Length = 607
Score = 1073 bits (2774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/607 (82%), Positives = 558/607 (91%), Gaps = 1/607 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS+ERL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSIERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM QEVFELTGYDRVM YKFHEDDHGEV +EI K GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMSQEVFELTGYDRVMIYKFHEDDHGEVFTEIRKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HVKV+QDE LP +LTLCGSTLRAPHSCHLQYMENMNSIASLVM++V
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLPLELTLCGSTLRAPHSCHLQYMENMNSIASLVMSIV 180
Query: 343 VNDEEEEG-DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 401
VN+ EEEG D+T P KRKRLWGLVVCH+T+PRFVPFPLRYACEFL QVFAIHVNKELELE
Sbjct: 181 VNEGEEEGSDSTHPDKRKRLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELE 240
Query: 402 YQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPND 461
Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGAALLYKNK +RLG+TP D
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYRLGMTPGD 300
Query: 462 FQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQ 521
FQ+ D+VSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAV+I+ KD +FWFRS
Sbjct: 301 FQIRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSH 360
Query: 522 TASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 581
TA+EVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN
Sbjct: 361 TAAEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 582 AFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGW 641
++K+ D K+IH++L DL+IEG++ELEAVTSEMVRLIETA+VPILAVDVDG+VNGW
Sbjct: 421 SYKEDEDTDTYAKAIHTRLSDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGW 480
Query: 642 NTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKIN 701
TKIA+LTGL VDKAIG HFL+LVE+SS D V ML LAL+G+EE+N+QFEIKTHG +
Sbjct: 481 YTKIADLTGLPVDKAIGCHFLSLVEESSADAVSSMLELALKGEEERNVQFEIKTHGERSE 540
Query: 702 DDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPP 761
PI+L+VNACASRD+ ++VVGVCF+AQDIT QK++MDKFTRIEGDYKAIVQNPNPLIPP
Sbjct: 541 SGPISLVVNACASRDIKESVVGVCFIAQDITAQKSMMDKFTRIEGDYKAIVQNPNPLIPP 600
Query: 762 IFGSDEF 768
IFG+DEF
Sbjct: 601 IFGTDEF 607
>gi|345424608|gb|AEN85408.1| phytochrome A, partial [Zilla spinosa]
Length = 598
Score = 1072 bits (2772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/598 (85%), Positives = 556/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEAADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS++TVKRML AL+G EEQN+QFEIKTH ++ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTIVEDSSVETVKRMLENALEGTEEQNVQFEIKTHLARADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424472|gb|AEN85340.1| phytochrome A, partial [Hemicrambe fruticulosa]
Length = 599
Score = 1071 bits (2770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/599 (85%), Positives = 556/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVG+CFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGMCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|315377383|gb|ADU05529.1| phytochrome A [Crucihimalaya wallichii]
Length = 599
Score = 1071 bits (2770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/599 (85%), Positives = 554/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I +WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIATWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVED+S++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDTSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADTGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|315377367|gb|ADU05521.1| phytochrome A [Capsella rubella]
Length = 599
Score = 1071 bits (2769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/599 (85%), Positives = 554/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L ++ SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQELASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+LIVNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLIVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|315377345|gb|ADU05510.1| phytochrome A [Erysimum cheiranthoides]
Length = 599
Score = 1071 bits (2769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/599 (85%), Positives = 554/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG+TP +F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGITPREFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|315377387|gb|ADU05531.1| phytochrome A [Olimarabidopsis cabulica]
Length = 599
Score = 1070 bits (2768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/599 (85%), Positives = 554/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEISSWLCECHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424580|gb|AEN85394.1| phytochrome A, partial [Stanleya pinnata]
gi|345424584|gb|AEN85396.1| phytochrome A, partial [Stanleya pinnata]
Length = 597
Score = 1070 bits (2768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/598 (84%), Positives = 549/598 (91%), Gaps = 4/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEV MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVAMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPH CHLQYM NM+SIASLVMAVV N+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHRCHLQYMVNMDSIASLVMAVV-NEEDGEGDAPDSTTPQK 179
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 180 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 239
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL E H D
Sbjct: 240 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCENHTD 299
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH PD+
Sbjct: 300 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHNPDD 359
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 360 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGDTTDVNTKIIH 419
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 420 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 479
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNAC SRDL
Sbjct: 480 GKHLLTVVEDSSVEIVKRMLENALEGIEEQNVQFEIKTHLSSADAGPISLVVNACTSRDL 539
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 540 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 597
>gi|345424268|gb|AEN85238.1| phytochrome A, partial [Cakile maritima]
Length = 593
Score = 1070 bits (2768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/593 (84%), Positives = 547/593 (92%), Gaps = 3/593 (0%)
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFH
Sbjct: 1 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFH 60
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VLQDEK
Sbjct: 61 DDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVLQDEK 120
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQKRKRLW 362
L FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQKRKRLW
Sbjct: 121 LSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKRKRLW 180
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+EL QI+EKNILRTQTLLCDMLMR
Sbjct: 181 GLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELGNQIVEKNILRTQTLLCDMLMR 240
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
DAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH DSTGLS
Sbjct: 241 DAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTDSTGLS 300
Query: 483 ADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+KDD R
Sbjct: 301 TDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDDKDDAR 360
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD 602
+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IHSKL D
Sbjct: 361 RMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIHSKLND 420
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
L+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AIGKH L
Sbjct: 421 LQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAIGKHLL 480
Query: 663 TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVV 722
TLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDLH+NVV
Sbjct: 481 TLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHENVV 540
Query: 723 GVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
GVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 GVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 593
>gi|345424552|gb|AEN85380.1| phytochrome A, partial [Rapistrum rugosum]
Length = 601
Score = 1070 bits (2767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/601 (85%), Positives = 556/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AY+FH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYRFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD------NTL 354
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDATAPPDSTA 180
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP++F L +I SWL EY
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSEFHLQEIASWLCEY 300
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLSADSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+
Sbjct: 301 HTDSTGLSADSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGKTTDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML ALQG EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLDNALQGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|345424208|gb|AEN85208.1| phytochrome A, partial [Cakile constricta]
Length = 595
Score = 1070 bits (2767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/594 (84%), Positives = 548/594 (92%), Gaps = 3/594 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRF PFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFDPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVTSEMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWC 771
H+NVVGVCFVA D+T QKTVMDKFTRI GDYKAIVQNPNPLIPPIFG+DEFGWC
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIVGDYKAIVQNPNPLIPPIFGTDEFGWC 594
>gi|345424544|gb|AEN85376.1| phytochrome A, partial [Raphanus raphanistrum]
Length = 601
Score = 1070 bits (2766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/601 (85%), Positives = 555/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD------NTL 354
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAAPPDSTA 180
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP++F L +I SWL EY
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSEFHLQEIASWLCEY 300
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML ALQG EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALQGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|345424180|gb|AEN85194.1| phytochrome A, partial [Brassica oleracea]
Length = 601
Score = 1070 bits (2766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/601 (84%), Positives = 551/601 (91%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT++QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEE-EGD-----NTL 354
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGGEGDATAPDSTP 180
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRD PLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EY
Sbjct: 241 LLCDMLMRDTPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEY 300
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P ++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 PVDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML AL+ EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALERTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NV GVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVAGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|315377391|gb|ADU05533.1| phytochrome A [Pachycladon novaezelandiae]
Length = 599
Score = 1070 bits (2766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/599 (85%), Positives = 553/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
I KH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IRKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|315377353|gb|ADU05514.1| phytochrome A [Arabidopsis halleri]
Length = 599
Score = 1070 bits (2766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/599 (85%), Positives = 554/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q++EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYHM
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHM 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++T I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTNVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLTVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424474|gb|AEN85341.1| phytochrome A, partial [Hemicrambe fruticulosa]
Length = 599
Score = 1069 bits (2765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/599 (85%), Positives = 556/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+D+HGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDEHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVG+CFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGMCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424166|gb|AEN85187.1| phytochrome A, partial [Brassica barrelieri]
Length = 601
Score = 1069 bits (2765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/601 (84%), Positives = 557/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKN+VRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNRVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD------NTL 354
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ +GD +T
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGDGDAAPAPDSTA 180
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL EY
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEY 300
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLS DSL+DAG+ ALALGD VCGMAAV+IS KDMIFWFRS TA EVRWGGAKH+
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVKISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 PDDRDDPRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
SIHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAV DGLVNGWNTKIAELTGLSVD
Sbjct: 421 SIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVGSDGLVNGWNTKIAELTGLSVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LT+VEDSS++ VKRML ALQG EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTIVEDSSVEIVKRMLENALQGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|345424598|gb|AEN85403.1| phytochrome A, partial [Vella spinosa]
gi|345424600|gb|AEN85404.1| phytochrome A, partial [Vella spinosa]
gi|345424602|gb|AEN85405.1| phytochrome A, partial [Vella spinosa]
gi|345424604|gb|AEN85406.1| phytochrome A, partial [Vella spinosa]
Length = 598
Score = 1069 bits (2764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLA KAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAGKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424550|gb|AEN85379.1| phytochrome A, partial [Rapistrum rugosum]
gi|345424554|gb|AEN85381.1| phytochrome A, partial [Rapistrum rugosum]
Length = 601
Score = 1069 bits (2764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/601 (85%), Positives = 555/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AY+FH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYRFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD------NTL 354
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDATAPPDSTA 180
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP++F L +I SWL EY
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSEFHLQEIASWLCEY 300
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML ALQG EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLDNALQGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|345424534|gb|AEN85371.1| phytochrome A, partial [Pseuderucaria teretifolia]
Length = 598
Score = 1069 bits (2764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 556/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424164|gb|AEN85186.1| phytochrome A, partial [Brassica barrelieri]
Length = 599
Score = 1069 bits (2764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/599 (85%), Positives = 557/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQD+KL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ +GD +T PQ
Sbjct: 121 LQDDKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGDGDAAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAV+IS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVKISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TKSI
Sbjct: 361 DRDDPRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKSI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAV DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVGSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LT+VEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTIVEDSSVEIVKRMLENALKGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424312|gb|AEN85260.1| phytochrome A, partial [Crambe maritima]
gi|345424314|gb|AEN85261.1| phytochrome A, partial [Crambe maritima]
Length = 598
Score = 1068 bits (2763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK+GLEPYLGLHYPATDIPQAARFLFMKNKVRMIV+C A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKAGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVNCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN---TLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD+ T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMVNMDSIASLVMAVVVNEEDGEGDSPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP +F L DI SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPGEFHLQDIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
G H LTLVEDSS++ VKRML AL+G EEQN++FEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GNHLLTLVEDSSVEIVKRMLENALEGTEEQNVEFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424528|gb|AEN85368.1| phytochrome A, partial [Pseuderucaria teretifolia]
Length = 598
Score = 1068 bits (2763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 556/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGEAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424532|gb|AEN85370.1| phytochrome A, partial [Pseuderucaria teretifolia]
Length = 598
Score = 1068 bits (2761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGEAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS+D VKRML AL+G EEQN+QFEIKTH S+ PI+L+VNACAS+DL
Sbjct: 481 GKHLLTLVEDSSVDIVKRMLENALEGTEEQNVQFEIKTHLSRTEAGPISLVVNACASKDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424458|gb|AEN85333.1| phytochrome A, partial [Erucastrum virgatum]
Length = 599
Score = 1068 bits (2761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/599 (85%), Positives = 555/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSL SGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLSSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTLPQ 356
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQ
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGADAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424596|gb|AEN85402.1| phytochrome A, partial [Vella aspera]
Length = 598
Score = 1067 bits (2760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/598 (85%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T QK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTASQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDDAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424360|gb|AEN85284.1| phytochrome A, partial [Eruca pinnatifida]
Length = 599
Score = 1067 bits (2759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/599 (85%), Positives = 554/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG+ T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGEAPDSTTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK+ T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGETADMNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS+ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVGIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|315377355|gb|ADU05515.1| phytochrome A [Arabidopsis lyrata]
Length = 599
Score = 1067 bits (2759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/599 (85%), Positives = 552/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEV ELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVSELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDASTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q+LEKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMLEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAAL YK+KIW+LG TP++F L +I SWL EYHM
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKDKIWKLGTTPSEFHLQEIASWLCEYHM 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPKALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+ HPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++T I
Sbjct: 361 DRDDARRTHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTNVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|315377349|gb|ADU05512.1| phytochrome A [Erysimum linifolium]
Length = 599
Score = 1067 bits (2759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/599 (85%), Positives = 552/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGE+VSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHDDDHGEIVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK KIWRLG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKIWRLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTGEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424496|gb|AEN85352.1| phytochrome A, partial [Kremeriella cordylocarpus]
gi|345424498|gb|AEN85353.1| phytochrome A, partial [Kremeriella cordylocarpus]
gi|345424504|gb|AEN85356.1| phytochrome A, partial [Kremeriella cordylocarpus]
Length = 599
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/599 (85%), Positives = 556/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK+GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQ
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPN+MDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNVMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 YSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424462|gb|AEN85335.1| phytochrome A, partial [Erucastrum virgatum]
Length = 599
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/599 (85%), Positives = 555/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSL SGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLSSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTLPQ 356
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQ
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGADAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDA+HSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAMHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424464|gb|AEN85336.1| phytochrome A, partial [Erucastrum virgatum]
Length = 599
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/599 (85%), Positives = 555/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSL SGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLSSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTLPQ 356
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQ
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGADAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+Q+PNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQNPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|315377351|gb|ADU05513.1| phytochrome A [Erysimum perofskianum]
Length = 599
Score = 1066 bits (2757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/599 (85%), Positives = 552/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK KIWRLG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKIWRLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFT IEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTWIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424484|gb|AEN85346.1| phytochrome A, partial [Hirschfeldia incana]
Length = 599
Score = 1066 bits (2757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/599 (85%), Positives = 555/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKN+VRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNRVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTLPQ 356
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQ
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGADAPDSTTPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCECHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424292|gb|AEN85250.1| phytochrome A, partial [Coincya rupestris]
Length = 599
Score = 1066 bits (2756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/598 (85%), Positives = 554/598 (92%), Gaps = 4/598 (0%)
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMA
Sbjct: 2 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 61
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VL
Sbjct: 62 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 121
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQK 357
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 122 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQK 181
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 182 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 241
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP++F LH+I SWL EYH D
Sbjct: 242 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSEFHLHEIASWLCEYHTD 301
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAV+IS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 302 STGLSTDSLHDAGFPRALALGDSVCGMAAVKISSKDMIFWFRSHTAGEVRWGGAKHDPDD 361
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF+D T D++TK IH
Sbjct: 362 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKIIH 421
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 422 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 481
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVE SS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 482 GKHLLTLVEGSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 541
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 542 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|315377347|gb|ADU05511.1| phytochrome A [Erysimum cheiri]
Length = 599
Score = 1065 bits (2755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/599 (85%), Positives = 552/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK KIW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QF+IKTH S + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFDIKTHLSTSDAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|315377377|gb|ADU05526.1| phytochrome A [Cochlearia danica]
Length = 599
Score = 1065 bits (2755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/599 (85%), Positives = 553/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK G+EPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TP+DF L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSDFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISLKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQ++QFEIKT S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLENALEGTEEQSVQFEIKTQLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|89330150|emb|CAJ80987.1| phytochrome A [Strobilanthes attenuata]
Length = 607
Score = 1065 bits (2755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/607 (82%), Positives = 555/607 (91%), Gaps = 1/607 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTG LIIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGGLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV SE+TK GLEPY GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFSEVTKPGLEPYSGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV V+QDEKL DLTLCGSTLRAPHSCHLQYMENM SIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVNVVQDEKLTLDLTLCGSTLRAPHSCHLQYMENMISIASLVMSVV 180
Query: 343 VNDEEEEGDNT-LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 401
VN+ +EE N+ P+KRKRLWGLVVCH+++PRFVPFPLRYACEFLAQVFAIHVNKELELE
Sbjct: 181 VNEGDEEASNSSQPEKRKRLWGLVVCHHSSPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 402 YQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPND 461
Q+LEKNILRTQTLLCDMLMRDAPLGIV+QSPN+MDLVKCDGA LLYK K++RLG++P D
Sbjct: 241 NQMLEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKGKMYRLGLSPID 300
Query: 462 FQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQ 521
FQ DIVSWL EYH DSTGLS DSLYDAG+ GAL+LGD VCGMAAV+I+ KD +FWFRS
Sbjct: 301 FQTRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLGDAVCGMAAVKITDKDWLFWFRSH 360
Query: 522 TASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 581
TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN
Sbjct: 361 TAAEIRWGGAKHEPSEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 582 AFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGW 641
AFK+ +++ IH++L DL+I+G++ELEAVTSEMVRLIETA+VPILAVDVDGLVNGW
Sbjct: 421 AFKEAEGDNMEANVIHTRLSDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGW 480
Query: 642 NTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKIN 701
NTKIA+LTGL+VDKAIG+HF+ LVE+SS D V +ML LALQG+EE+N+QFEIKTHG
Sbjct: 481 NTKIADLTGLTVDKAIGRHFIGLVEESSADIVSKMLELALQGKEERNVQFEIKTHGPGSE 540
Query: 702 DDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPP 761
PI+L+VNACASRD+ +NVVGVCF+AQDIT QKT+MDKFT+IEGDY+AIVQNPNPLIPP
Sbjct: 541 AGPISLVVNACASRDVKENVVGVCFIAQDITAQKTMMDKFTKIEGDYRAIVQNPNPLIPP 600
Query: 762 IFGSDEF 768
IFG+DEF
Sbjct: 601 IFGTDEF 607
>gi|345424352|gb|AEN85280.1| phytochrome A, partial [Enarthrocarpus lyratus]
gi|345424356|gb|AEN85282.1| phytochrome A, partial [Enarthrocarpus lyratus]
Length = 598
Score = 1065 bits (2755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/598 (85%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN---TLPQK 357
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD+ T PQK
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDSPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL E H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCECHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|315377385|gb|ADU05530.1| phytochrome A [Neslia paniculata]
Length = 599
Score = 1065 bits (2754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/599 (85%), Positives = 551/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKN LRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNTLRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFSRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKT ++ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTQLTRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|315377381|gb|ADU05528.1| phytochrome A [Crucihimalaya lasiocarpa]
Length = 599
Score = 1065 bits (2754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/599 (84%), Positives = 553/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDR M
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQY+ NM+SIASLVMAVVVN+E+ EG+ T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYVANMDSIASLVMAVVVNEEDGEGEAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I +WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIATWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQ+ILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQIILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVED+S++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDTSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADTGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424568|gb|AEN85388.1| phytochrome A, partial [Schouwia purpurea]
Length = 593
Score = 1065 bits (2754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/594 (84%), Positives = 546/594 (91%), Gaps = 4/594 (0%)
Query: 185 VKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKF 244
VKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKF
Sbjct: 1 VKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKF 60
Query: 245 HEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDE 304
H+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V QDE
Sbjct: 61 HDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVFQDE 120
Query: 305 KLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQKRKRL 361
KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQKRKRL
Sbjct: 121 KLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPGSTTPQKRKRL 180
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDMLM
Sbjct: 181 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDMLM 240
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TP++F L +I SWL EYH DSTGL
Sbjct: 241 RDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCEYHTDSTGL 300
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
S DSL+DAG+ ALALGD VCGMAAVRIS DMIFWFRS TA EVRWGGAKH+PD+KDD
Sbjct: 301 STDSLHDAGFPRALALGDSVCGMAAVRISSTDMIFWFRSHTAGEVRWGGAKHDPDDKDDA 360
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLC 601
R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++T IHSKL
Sbjct: 361 RRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTNIIHSKLN 420
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AIGKH
Sbjct: 421 DLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIGKHL 480
Query: 662 LTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS+DLH+NV
Sbjct: 481 LTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASKDLHENV 540
Query: 722 VGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
VGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+D GWC EWN
Sbjct: 541 VGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTD-VGWCSEWN 593
>gi|345424486|gb|AEN85347.1| phytochrome A, partial [Hirschfeldia incana]
gi|345424490|gb|AEN85349.1| phytochrome A, partial [Hirschfeldia incana]
gi|345424492|gb|AEN85350.1| phytochrome A, partial [Hirschfeldia incana]
Length = 599
Score = 1065 bits (2754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/599 (85%), Positives = 554/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHCRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTLPQ 356
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQ
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGADAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+WRLG+TP+D+ L +I SWL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWRLGITPSDYHLQEIASWLCECHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424316|gb|AEN85262.1| phytochrome A, partial [Crambe orientalis]
gi|345424318|gb|AEN85263.1| phytochrome A, partial [Crambe orientalis]
gi|345424320|gb|AEN85264.1| phytochrome A, partial [Crambe orientalis]
Length = 598
Score = 1065 bits (2754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/598 (85%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+ + EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEGDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP +F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPGEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I+
Sbjct: 361 RDDPRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIY 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424184|gb|AEN85196.1| phytochrome A, partial [Brassica spinescens]
Length = 601
Score = 1065 bits (2753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/601 (84%), Positives = 553/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFL MKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLLMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN------TL 354
LQDEKL F+LTLCGS LRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGDN T
Sbjct: 121 LQDEKLSFELTLCGSALRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDNAPADSTTA 180
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP+++ L +I SWL EY
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSEYHLQEIASWLCEY 300
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETGDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
+IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAV DGLVNGWNTKIAELTGL VD
Sbjct: 421 TIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVGSDGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHPSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|315377357|gb|ADU05516.1| phytochrome A [Arabidopsis neglecta]
Length = 599
Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/599 (84%), Positives = 552/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK G EPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGQEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q++EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAA LYK+KIW+LG TP++F L +I SWL EYHM
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAAFLYKDKIWKLGTTPSEFHLQEIASWLCEYHM 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++T I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTNVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLTVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEI+TH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIQTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424168|gb|AEN85188.1| phytochrome A, partial [Brassica nigra]
Length = 599
Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/599 (85%), Positives = 553/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFL QVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLTQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424322|gb|AEN85265.1| phytochrome A, partial [Crambe orientalis]
Length = 598
Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+ + EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEGDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKN+LRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNVLRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP +F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPGEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I+
Sbjct: 361 RDDPRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIY 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424592|gb|AEN85400.1| phytochrome A, partial [Vella aspera]
Length = 598
Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 551/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+ K GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVIKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDDAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
G H LTLVEDSS++ VKRML AL G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GTHLLTLVEDSSVEIVKRMLENALDGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|315377369|gb|ADU05522.1| phytochrome A [Cardamine hirsuta]
Length = 599
Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/599 (85%), Positives = 551/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP+DF L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSDFHLQEIASWLYEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPKALGLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL +LKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNELKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKA ++NPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKATIRNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424368|gb|AEN85288.1| phytochrome A, partial [Eruca vesicaria]
Length = 593
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/596 (84%), Positives = 547/596 (91%), Gaps = 4/596 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN EE+E ++ PQKRKR
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVN-EEDEPESATPQKRKR 179
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+E+E QI+EKNILRTQTLLCDML
Sbjct: 180 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVEMENQIVEKNILRTQTLLCDML 239
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG TP++F L +I SWL EYH DSTG
Sbjct: 240 MRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQEIASWLCEYHTDSTG 299
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+KDD
Sbjct: 300 LSTDSLHDAGF--PRDLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDD 357
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTL-DLDTKSIHSK 599
R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD G +++T I+SK
Sbjct: 358 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGGEASEVNTNIIYSK 417
Query: 600 LCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGK 659
L DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+AIGK
Sbjct: 418 LNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGK 477
Query: 660 HFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHD 719
H LTLVEDSS++ VKRML AL+G EEQN+QF+IKTH S+ + PI+ +VNACAS+DLH+
Sbjct: 478 HLLTLVEDSSVEVVKRMLENALEGTEEQNVQFDIKTHLSRTDAGPISFVVNACASKDLHE 537
Query: 720 NVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
NVVGVCFVA D+T QKTVMDKFTR EGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 538 NVVGVCFVAHDLTGQKTVMDKFTRKEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 593
>gi|315377414|gb|ADU05544.1| phytochrome A [Camelina laxa]
Length = 599
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/599 (85%), Positives = 551/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TP++F L +I SWL +YH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCQYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKT ++ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSLEIVKRMLENALEGTEEQNVQFEIKTQLTRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424370|gb|AEN85289.1| phytochrome A, partial [Eruca vesicaria]
Length = 593
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/596 (84%), Positives = 547/596 (91%), Gaps = 4/596 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN EE+E ++ PQKRKR
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVN-EEDEPESATPQKRKR 179
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+E+E QI+EKNILRTQTLLCDML
Sbjct: 180 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVEMENQIVEKNILRTQTLLCDML 239
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG TP++F L +I SWL EYH DSTG
Sbjct: 240 MRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQEIASWLCEYHTDSTG 299
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+KDD
Sbjct: 300 LSTDSLHDAGF--PRDLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDD 357
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTL-DLDTKSIHSK 599
R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD G +++T I+SK
Sbjct: 358 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGGEASEVNTNIIYSK 417
Query: 600 LCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGK 659
L +LKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+AIGK
Sbjct: 418 LNNLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGK 477
Query: 660 HFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHD 719
H LTLVEDSS++ VKRML AL+G EEQN+QF+IKTH S+ + PI+ +VNACAS+DLH+
Sbjct: 478 HLLTLVEDSSVEVVKRMLENALEGTEEQNVQFDIKTHLSRTDAGPISFVVNACASKDLHE 537
Query: 720 NVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
NVVGVCFVA D+T QKTVMDKFTR EGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 538 NVVGVCFVAHDLTGQKTVMDKFTRKEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 593
>gi|345424586|gb|AEN85397.1| phytochrome A, partial [Trachystoma labasii]
gi|345424588|gb|AEN85398.1| phytochrome A, partial [Trachystoma labasii]
Length = 601
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/601 (85%), Positives = 555/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTL-- 354
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGGDAPDSTTAQ 180
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D L +I SWL +Y
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDHHLQEIASWLCDY 300
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD D++TK
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEITDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|345424476|gb|AEN85342.1| phytochrome A, partial [Henophyton deserti]
Length = 598
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTAPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPRDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VK+ML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKKMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGD+KAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDHKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424494|gb|AEN85351.1| phytochrome A, partial [Hirschfeldia incana]
Length = 599
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/599 (85%), Positives = 554/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTLPQ 356
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQ
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGADAPDSTTPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCECHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAI SLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIRSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424300|gb|AEN85254.1| phytochrome A, partial [Crambe hispanica subsp. abyssinica]
Length = 598
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/598 (85%), Positives = 555/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL DLTLCGSTLRAP+SCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSVDLTLCGSTLRAPYSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLLEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETGDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424430|gb|AEN85319.1| phytochrome A, partial [Erucastrum abyssinicum]
Length = 598
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/598 (85%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL E H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCECHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGG KH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGTKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK+IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRGDAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424482|gb|AEN85345.1| phytochrome A, partial [Henophyton deserti]
Length = 598
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTAPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPRDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILR+AFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRSAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VK+ML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKKMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424310|gb|AEN85259.1| phytochrome A, partial [Crambe maritima]
Length = 598
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/598 (85%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK+GLEPYLGLHYPATDIPQAARFLFMKNKVRMIV+C A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKAGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVNCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN---TLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD+ T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMVNMDSIASLVMAVVVNEEDGEGDSPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP +F L DI SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPGEFHLQDIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSF+AFLEVVKTRSL WKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFRAFLEVVKTRSLLWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
G H LTLVEDSS++ VKRML AL+G EEQN++FEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GNHLLTLVEDSSVEIVKRMLENALEGTEEQNVEFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424302|gb|AEN85255.1| phytochrome A, partial [Crambe hispanica subsp. abyssinica]
Length = 598
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRL+SLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLESLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQK 357
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQK
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGEAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETGDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCF A D+T QK VMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFAAHDLTGQKNVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|410718222|gb|AFV79487.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/782 (65%), Positives = 619/782 (79%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGNGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFLQ+
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLQI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLKAL Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|345424574|gb|AEN85391.1| phytochrome A, partial [Sisymbrium altissimum]
Length = 598
Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/598 (85%), Positives = 553/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ E D +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDAPNSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE I+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENLIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTR EGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRTEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424478|gb|AEN85343.1| phytochrome A, partial [Henophyton deserti]
Length = 598
Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 553/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPAT IPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATGIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTAPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPRDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VK+ML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKKMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424172|gb|AEN85190.1| phytochrome A, partial [Brassica nigra]
Length = 599
Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 552/598 (92%), Gaps = 4/598 (0%)
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMA
Sbjct: 2 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 61
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VL
Sbjct: 62 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 121
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQK 357
QDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQK
Sbjct: 122 QDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTAPQK 181
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFL QVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 182 RKRLWGLVVCHNTSPRFVPFPLRYACEFLTQVFAIHVNKEVELENQIVEKNILRTQTLLC 241
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 242 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 301
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 302 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 361
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 362 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADVNTKIIH 421
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 422 SKLNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 481
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 482 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 541
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 542 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424376|gb|AEN85292.1| phytochrome A, partial [Eruca vesicaria]
Length = 593
Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/596 (84%), Positives = 546/596 (91%), Gaps = 4/596 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN EE+E ++ PQKRKR
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVN-EEDEPESATPQKRKR 179
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+E+E QI+EKNILRTQTLLCDML
Sbjct: 180 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVEMENQIVEKNILRTQTLLCDML 239
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG TP++F L +I SWL EYH DSTG
Sbjct: 240 MRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQEIASWLCEYHTDSTG 299
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ LGD VCGMAAVRIS KDMIFW RS TA EVRWGGAKH+PD+KDD
Sbjct: 300 LSTDSLHDAGF--PRDLGDSVCGMAAVRISSKDMIFWLRSHTAGEVRWGGAKHDPDDKDD 357
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTL-DLDTKSIHSK 599
R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD G +++T I+SK
Sbjct: 358 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGGEASEVNTNIIYSK 417
Query: 600 LCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGK 659
L DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+AIGK
Sbjct: 418 LNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGK 477
Query: 660 HFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHD 719
H LTLVEDSS++ VKRML AL+G EEQN+QF+IKTH S+ + PI+ +VNACAS+DLH+
Sbjct: 478 HLLTLVEDSSVEVVKRMLENALEGTEEQNVQFDIKTHLSRTDAGPISFVVNACASKDLHE 537
Query: 720 NVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
NVVGVCFVA D+T QKTVMDKFTR EGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 538 NVVGVCFVAHDLTGQKTVMDKFTRKEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 593
>gi|345424452|gb|AEN85330.1| phytochrome A, partial [Erucastrum gallicum]
Length = 599
Score = 1063 bits (2748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/599 (84%), Positives = 554/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTLPQ 356
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQ
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGGEAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL + H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCDCHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS SL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTGSLHDAGFRRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK+I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADARPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424480|gb|AEN85344.1| phytochrome A, partial [Henophyton deserti]
Length = 598
Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 553/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTAPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPRDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS K MIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKYMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGDTTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VK+ML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKKMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424170|gb|AEN85189.1| phytochrome A, partial [Brassica nigra]
Length = 599
Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/599 (84%), Positives = 552/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFL QVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLTQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CD LMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH
Sbjct: 241 CDTLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|410718130|gb|AFV79441.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/782 (64%), Positives = 618/782 (79%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLKAL Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|183239028|gb|ACC60972.1| phytochrome E [Vitis riparia]
Length = 1124
Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/1035 (51%), Positives = 712/1035 (68%), Gaps = 34/1035 (3%)
Query: 23 IAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
IAQ DA+L A+FE SG SF+YS SV + + + Q AYL IQ+G L
Sbjct: 37 IAQYNADARLLAEFEQSGESGKSFNYSRSVMNAPESVPEDQ------IIAYLSRIQRGGL 90
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
+QPFGC+LA++E TF++I+YSEN+ + L + N + ++G+ D++T+FT PS++
Sbjct: 91 VQPFGCMLAIEEPTFRIISYSENSMDFLGL-NTLSETTQLKSLIGV--DVRTLFTPPSSA 147
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
+L KA E+SLLNPI VH +++ K FYAI+HR+ ++ID EP + + ++ AGA+Q
Sbjct: 148 SLAKAAMSREISLLNPIWVHSRSAQKTFYAILHRIDVGIVIDLEPTRSGDPALSLAGAVQ 207
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
S KLA +AI+RLQSLP G + LCDT++++V +LTGYDRVM YKFH+DDHGEVVSEI +S
Sbjct: 208 SQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRRS 267
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
LEPYLGLHYPATDIPQAARFLF +N+VR+I DC A+ V+V+Q E+L L L STLR+
Sbjct: 268 DLEPYLGLHYPATDIPQAARFLFKQNRVRIICDCNAKAVRVIQSEELKQPLCLVNSTLRS 327
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPL 379
PH CHLQYM NM IASL MAVV+N + +LWGLVVCH+T+PR+VPFPL
Sbjct: 328 PHGCHLQYMVNMGCIASLAMAVVINGNDA----------TKLWGLVVCHHTSPRYVPFPL 377
Query: 380 RYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLV 439
RYACEFL Q F + + EL+L Q+ EK ILR QTLLCDML+R+APLGIVT SP+IMDL+
Sbjct: 378 RYACEFLMQAFGLQLYMELQLASQLAEKKILRMQTLLCDMLLREAPLGIVTHSPSIMDLL 437
Query: 440 KCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGD 499
KCDGAAL Y + W LGVTP + Q+ DI WL H DSTGLS DSL DAGY GA LGD
Sbjct: 438 KCDGAALHYGGRCWLLGVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADAGYPGAALLGD 497
Query: 500 VVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKT 559
VCGMA RI+ KD +FWFRS TA EV+WGGAKH P++KDDG +MHPRSSFKAFLEVVK+
Sbjct: 498 AVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFKAFLEVVKS 557
Query: 560 RSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK-SIHSKLCDLKIEGMKELEAVTSEM 618
RSLPW+ E++AIHSLQLI+R++F+D+ D K +H++ D +++G+ EL +V EM
Sbjct: 558 RSLPWEVSEINAIHSLQLIMRDSFQDIE--DSSGKVMVHAQKYDSEMQGLNELSSVACEM 615
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL-TLVEDSSIDTVKRML 677
V+LIETAT PI VD G +NGWN KIAELT L +A+GK + +V + V +L
Sbjct: 616 VKLIETATAPIFGVDSSGCINGWNAKIAELTELQAKEAMGKSLVDEIVHEDLRGAVDNLL 675
Query: 678 YLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTV 737
ALQG+E++N++ ++K G D + ++VNAC SRD +++VGVCFV QDIT +K V
Sbjct: 676 CRALQGKEDKNVELKLKKFGLNQQDSALYIVVNACTSRDYTNDIVGVCFVGQDITSEKIV 735
Query: 738 MDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAE 797
MDKF R++GDYKAIVQ+ NPLIPPIF SD C EWN ++ KLTGW R EVI K+L E
Sbjct: 736 MDKFIRLQGDYKAIVQSLNPLIPPIFASDGNACCSEWNTSLEKLTGWMRHEVIRKMLPGE 795
Query: 798 VFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDR 857
VFG C LK+Q+ I+L +A+SGQD EK PFGFF ++GK E LL NK+ D
Sbjct: 796 VFG---GLCPLKSQDTLTRFTILLYQAISGQDTEKFPFGFFDKSGKLVEVLLTANKRTDA 852
Query: 858 EGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMM 917
G V G FCFLQ+ + + Q L + + K LAY +++++NPL+GI F+ K++
Sbjct: 853 NGNVIGCFCFLQIDTPDKHQGLG-DGPEYRECFSKFKELAYIRQEMKNPLNGIRFTHKLL 911
Query: 918 EGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQV 977
E T QK+ L TS C+RQ+ I+ D D+ I +G ++L + EF L VL A +SQV
Sbjct: 912 ETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEEGSMELNVEEFLLGNVLDAVVSQV 971
Query: 978 MMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG---QLMVSSS 1034
MM K +++V E E+I + L GD I+LQQVL+DFL ++ P+ ++ +S+
Sbjct: 972 MMLLKEKKLQLVCEIPEEIKTLPLSGDQIKLQQVLSDFLHNIVHHAPSSDGWIEIKISTG 1031
Query: 1035 LTKDQ-LGQSVHLAY 1048
L Q + +HL +
Sbjct: 1032 LKMIQDFNEFIHLQF 1046
>gi|345424530|gb|AEN85369.1| phytochrome A, partial [Pseuderucaria teretifolia]
Length = 598
Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 554/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTL APHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLWAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA+EV+WGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T +++T IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETNNVNTNIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS+D VKRML AL+G EEQN+QFEIKTH S+ PI+L+VNACAS+DL
Sbjct: 481 GKHLLTLVEDSSVDIVKRMLENALEGTEEQNVQFEIKTHLSRAEAGPISLVVNACASKDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424308|gb|AEN85258.1| phytochrome A, partial [Crambe hispanica subsp. abyssinica]
Length = 598
Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 553/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSVDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
S+L DLKI+G++ELEAVTSEMVRLIETATVPILAVD D LVNGWNTKIAELTGL VD+AI
Sbjct: 421 SRLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDELVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QK VMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKNVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424594|gb|AEN85401.1| phytochrome A, partial [Vella aspera]
Length = 597
Score = 1062 bits (2746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/597 (85%), Positives = 550/597 (92%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+ K GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVIKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDDAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
G H LTLVEDSS++ VKRML AL G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GTHLLTLVEDSSVEIVKRMLENALDGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424548|gb|AEN85378.1| phytochrome A, partial [Raphanus raphanistrum]
Length = 598
Score = 1062 bits (2746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/597 (85%), Positives = 552/597 (92%), Gaps = 6/597 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD------NTL 354
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAAPPDSTA 180
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP++F L +I SWL EY
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSEFHLQEIASWLCEY 300
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML ALQG EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALQGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWC 771
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWC 597
>gi|89330110|emb|CAJ80967.1| phytochrome A [Phtheirospermum japonicum]
Length = 610
Score = 1062 bits (2746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/610 (81%), Positives = 555/610 (90%), Gaps = 4/610 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTG LIIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGGLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELT YDRVM YKFH+DDHGEV+SEITK GL+PY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTSYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HVKV+QD+ LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL---PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELE 399
VN+ E+G ++ P K+KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+E
Sbjct: 181 VNEGNEDGPDSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIE 240
Query: 400 LEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTP 459
LE Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA L+YK K +RLG+TP
Sbjct: 241 LENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGMTP 300
Query: 460 NDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFR 519
+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ KD +FWFR
Sbjct: 301 SDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWFR 360
Query: 520 SQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 579
S TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLEVVKTRSLPWKD EMDAIHSLQLIL
Sbjct: 361 SHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDIEMDAIHSLQLIL 420
Query: 580 RNAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLV 638
RNA K+ D+D K IH++L DL+++GM+ELEAVTSEMVRLIETA+VPI AVDVDGLV
Sbjct: 421 RNASNKEAEERDMDGKEIHARLNDLQLDGMQELEAVTSEMVRLIETASVPIFAVDVDGLV 480
Query: 639 NGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGS 698
NGWNTKIA+LTGL V+KAIG+HFL LVEDSS + V +ML LALQG EE+N+QFEIKTHG
Sbjct: 481 NGWNTKIADLTGLPVEKAIGRHFLALVEDSSAEKVNKMLELALQGNEERNVQFEIKTHGP 540
Query: 699 KINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPL 758
+ PI+LIVNACASRD+ +NVVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN L
Sbjct: 541 RSESGPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQL 600
Query: 759 IPPIFGSDEF 768
IPPIFGSDEF
Sbjct: 601 IPPIFGSDEF 610
>gi|345424488|gb|AEN85348.1| phytochrome A, partial [Hirschfeldia incana]
Length = 598
Score = 1062 bits (2746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/598 (85%), Positives = 553/598 (92%), Gaps = 4/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTLPQ 356
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQ
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGADAPDSTTPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCECHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DS +DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSSHDAGFPRALALGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 598
>gi|315377371|gb|ADU05523.1| phytochrome A [Cardamine bulbosa]
Length = 599
Score = 1061 bits (2745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/599 (85%), Positives = 550/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H KV
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHAKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP+DF L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSDFHLQEIASWLYEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEATDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL +LKI+G++ LEAVTSEMVRLIETA VPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLHELKIDGIQGLEAVTSEMVRLIETAMVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTL+EDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLIEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNP+PLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPSPLIPPIFGTDEFGWCTEWN 599
>gi|410718140|gb|AFV79446.1| phytochrome N, partial [Pinus sylvestris]
gi|410718218|gb|AFV79485.1| phytochrome N, partial [Pinus sylvestris]
gi|410718268|gb|AFV79510.1| phytochrome N, partial [Pinus sylvestris]
gi|410718270|gb|AFV79511.1| phytochrome N, partial [Pinus sylvestris]
gi|410718278|gb|AFV79515.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1061 bits (2745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/782 (64%), Positives = 618/782 (79%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLKAL Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHILEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|345424538|gb|AEN85373.1| phytochrome A, partial [Raffenaldia primuloides]
gi|345424542|gb|AEN85375.1| phytochrome A, partial [Raffenaldia primuloides]
Length = 601
Score = 1061 bits (2745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/601 (84%), Positives = 554/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD-----NTLP 355
LQD+KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T P
Sbjct: 121 LQDDKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPPDSTTQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIH NKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHANKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP+D+ L +I +WL EYH
Sbjct: 241 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDYHLQEIATWLCEYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD-VGTLDLDTK 594
D++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 DDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTTDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
+IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD
Sbjct: 421 TIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH L+LVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLSLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+N+VGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|410718122|gb|AFV79437.1| phytochrome N, partial [Pinus sylvestris]
gi|410718124|gb|AFV79438.1| phytochrome N, partial [Pinus sylvestris]
gi|410718126|gb|AFV79439.1| phytochrome N, partial [Pinus sylvestris]
gi|410718134|gb|AFV79443.1| phytochrome N, partial [Pinus sylvestris]
gi|410718136|gb|AFV79444.1| phytochrome N, partial [Pinus sylvestris]
gi|410718138|gb|AFV79445.1| phytochrome N, partial [Pinus sylvestris]
gi|410718142|gb|AFV79447.1| phytochrome N, partial [Pinus sylvestris]
gi|410718144|gb|AFV79448.1| phytochrome N, partial [Pinus sylvestris]
gi|410718150|gb|AFV79451.1| phytochrome N, partial [Pinus sylvestris]
gi|410718152|gb|AFV79452.1| phytochrome N, partial [Pinus sylvestris]
gi|410718154|gb|AFV79453.1| phytochrome N, partial [Pinus sylvestris]
gi|410718156|gb|AFV79454.1| phytochrome N, partial [Pinus sylvestris]
gi|410718158|gb|AFV79455.1| phytochrome N, partial [Pinus sylvestris]
gi|410718160|gb|AFV79456.1| phytochrome N, partial [Pinus sylvestris]
gi|410718162|gb|AFV79457.1| phytochrome N, partial [Pinus sylvestris]
gi|410718164|gb|AFV79458.1| phytochrome N, partial [Pinus sylvestris]
gi|410718168|gb|AFV79460.1| phytochrome N, partial [Pinus sylvestris]
gi|410718172|gb|AFV79462.1| phytochrome N, partial [Pinus sylvestris]
gi|410718176|gb|AFV79464.1| phytochrome N, partial [Pinus sylvestris]
gi|410718178|gb|AFV79465.1| phytochrome N, partial [Pinus sylvestris]
gi|410718180|gb|AFV79466.1| phytochrome N, partial [Pinus sylvestris]
gi|410718182|gb|AFV79467.1| phytochrome N, partial [Pinus sylvestris]
gi|410718184|gb|AFV79468.1| phytochrome N, partial [Pinus sylvestris]
gi|410718186|gb|AFV79469.1| phytochrome N, partial [Pinus sylvestris]
gi|410718188|gb|AFV79470.1| phytochrome N, partial [Pinus sylvestris]
gi|410718190|gb|AFV79471.1| phytochrome N, partial [Pinus sylvestris]
gi|410718192|gb|AFV79472.1| phytochrome N, partial [Pinus sylvestris]
gi|410718194|gb|AFV79473.1| phytochrome N, partial [Pinus sylvestris]
gi|410718196|gb|AFV79474.1| phytochrome N, partial [Pinus sylvestris]
gi|410718198|gb|AFV79475.1| phytochrome N, partial [Pinus sylvestris]
gi|410718200|gb|AFV79476.1| phytochrome N, partial [Pinus sylvestris]
gi|410718202|gb|AFV79477.1| phytochrome N, partial [Pinus sylvestris]
gi|410718204|gb|AFV79478.1| phytochrome N, partial [Pinus sylvestris]
gi|410718206|gb|AFV79479.1| phytochrome N, partial [Pinus sylvestris]
gi|410718208|gb|AFV79480.1| phytochrome N, partial [Pinus sylvestris]
gi|410718210|gb|AFV79481.1| phytochrome N, partial [Pinus sylvestris]
gi|410718212|gb|AFV79482.1| phytochrome N, partial [Pinus sylvestris]
gi|410718216|gb|AFV79484.1| phytochrome N, partial [Pinus sylvestris]
gi|410718220|gb|AFV79486.1| phytochrome N, partial [Pinus sylvestris]
gi|410718224|gb|AFV79488.1| phytochrome N, partial [Pinus sylvestris]
gi|410718226|gb|AFV79489.1| phytochrome N, partial [Pinus sylvestris]
gi|410718228|gb|AFV79490.1| phytochrome N, partial [Pinus sylvestris]
gi|410718230|gb|AFV79491.1| phytochrome N, partial [Pinus sylvestris]
gi|410718232|gb|AFV79492.1| phytochrome N, partial [Pinus sylvestris]
gi|410718234|gb|AFV79493.1| phytochrome N, partial [Pinus sylvestris]
gi|410718236|gb|AFV79494.1| phytochrome N, partial [Pinus sylvestris]
gi|410718238|gb|AFV79495.1| phytochrome N, partial [Pinus sylvestris]
gi|410718240|gb|AFV79496.1| phytochrome N, partial [Pinus sylvestris]
gi|410718242|gb|AFV79497.1| phytochrome N, partial [Pinus sylvestris]
gi|410718244|gb|AFV79498.1| phytochrome N, partial [Pinus sylvestris]
gi|410718246|gb|AFV79499.1| phytochrome N, partial [Pinus sylvestris]
gi|410718248|gb|AFV79500.1| phytochrome N, partial [Pinus sylvestris]
gi|410718250|gb|AFV79501.1| phytochrome N, partial [Pinus sylvestris]
gi|410718252|gb|AFV79502.1| phytochrome N, partial [Pinus sylvestris]
gi|410718256|gb|AFV79504.1| phytochrome N, partial [Pinus sylvestris]
gi|410718262|gb|AFV79507.1| phytochrome N, partial [Pinus sylvestris]
gi|410718266|gb|AFV79509.1| phytochrome N, partial [Pinus sylvestris]
gi|410718274|gb|AFV79513.1| phytochrome N, partial [Pinus sylvestris]
gi|410718276|gb|AFV79514.1| phytochrome N, partial [Pinus sylvestris]
gi|410718282|gb|AFV79517.1| phytochrome N, partial [Pinus sylvestris]
gi|410718284|gb|AFV79518.1| phytochrome N, partial [Pinus sylvestris]
gi|410718288|gb|AFV79520.1| phytochrome N, partial [Pinus sylvestris]
gi|410718290|gb|AFV79521.1| phytochrome N, partial [Pinus sylvestris]
gi|410718292|gb|AFV79522.1| phytochrome N, partial [Pinus sylvestris]
gi|410718296|gb|AFV79524.1| phytochrome N, partial [Pinus sylvestris]
gi|410718306|gb|AFV79529.1| phytochrome N, partial [Pinus sylvestris]
gi|410718308|gb|AFV79530.1| phytochrome N, partial [Pinus sylvestris]
gi|410718310|gb|AFV79531.1| phytochrome N, partial [Pinus sylvestris]
gi|410718314|gb|AFV79533.1| phytochrome N, partial [Pinus sylvestris]
gi|410718316|gb|AFV79534.1| phytochrome N, partial [Pinus sylvestris]
gi|410718318|gb|AFV79535.1| phytochrome N, partial [Pinus sylvestris]
gi|410718324|gb|AFV79538.1| phytochrome N, partial [Pinus sylvestris]
gi|410718328|gb|AFV79540.1| phytochrome N, partial [Pinus sylvestris]
gi|410718330|gb|AFV79541.1| phytochrome N, partial [Pinus sylvestris]
gi|410718332|gb|AFV79542.1| phytochrome N, partial [Pinus sylvestris]
gi|410718336|gb|AFV79544.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1061 bits (2744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/782 (64%), Positives = 618/782 (79%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLKAL Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|345424354|gb|AEN85281.1| phytochrome A, partial [Enarthrocarpus lyratus]
Length = 597
Score = 1061 bits (2744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/597 (85%), Positives = 553/597 (92%), Gaps = 3/597 (0%)
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMA
Sbjct: 1 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 60
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VL
Sbjct: 61 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 120
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN---TLPQKR 358
QDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD+ T PQKR
Sbjct: 121 QDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDSPDSTAPQKR 180
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCD
Sbjct: 181 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCD 240
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
MLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL E H DS
Sbjct: 241 MLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCECHTDS 300
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD++
Sbjct: 301 TGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDR 360
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF+D T D++TK IHS
Sbjct: 361 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFEDGETTDVNTKIIHS 420
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
KL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AIG
Sbjct: 421 KLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIG 480
Query: 659 KHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLH 718
KH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDLH
Sbjct: 481 KHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLH 540
Query: 719 DNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 ENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 597
>gi|345424500|gb|AEN85354.1| phytochrome A, partial [Kremeriella cordylocarpus]
Length = 595
Score = 1061 bits (2744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/595 (84%), Positives = 551/595 (92%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ + T QKRKR
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMSNMDSIASLVMAVVVNEEDADDSTTQTQKRKR 180
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDML
Sbjct: 181 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPN+MDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH DSTG
Sbjct: 241 MRDAPLGIVSQSPNVMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTDSTG 300
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ ALALGD VCGMAAVRIS KD+IFWFRS TA EVRWGGAKH+PD++DD
Sbjct: 301 LSTDSLHDAGFPRALALGDSVCGMAAVRISSKDVIFWFRSHTAGEVRWGGAKHDPDDRDD 360
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
R+MHPRSSFKAFLEVVKTRSLPWKDYEMDA+HSLQLILRNAFKD T D++TK I+SKL
Sbjct: 361 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAVHSLQLILRNAFKDGETTDVNTKIIYSKL 420
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AIGKH
Sbjct: 421 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIGKH 480
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDLH+N
Sbjct: 481 LLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHEN 540
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
V GVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 VAGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 595
>gi|345424466|gb|AEN85337.1| phytochrome A, partial [Guiraoa arvensis]
gi|345424468|gb|AEN85338.1| phytochrome A, partial [Guiraoa arvensis]
Length = 598
Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 552/598 (92%), Gaps = 4/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAIT LQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITGLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
+RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 RRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SW+ EYH
Sbjct: 241 CDMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWMCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLLVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 598
>gi|315377365|gb|ADU05520.1| phytochrome A [Camelina sativa]
Length = 599
Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/599 (84%), Positives = 550/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVED+S++ VKRML AL+G EEQN+QFEIKT ++ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDASVEIVKRMLENALEGTEEQNVQFEIKTQLTRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+ QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLAGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|410718258|gb|AFV79505.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/782 (64%), Positives = 618/782 (79%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLKAL Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|345424304|gb|AEN85256.1| phytochrome A, partial [Crambe hispanica subsp. abyssinica]
Length = 598
Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/598 (84%), Positives = 552/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSVDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
S+L DLKI+G++ELEAVTSEMVRLIETATVPILAVD D LVNGWNTKIAELTGL VD+AI
Sbjct: 421 SRLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDELVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNAC SRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACVSRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QK VMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKNVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424546|gb|AEN85377.1| phytochrome A, partial [Raphanus raphanistrum]
Length = 597
Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/597 (85%), Positives = 551/597 (92%), Gaps = 6/597 (1%)
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYK
Sbjct: 1 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYK 60
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VLQD
Sbjct: 61 FHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVLQD 120
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD------NTLPQK 357
EKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 EKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAAPPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML ALQG EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALQGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424348|gb|AEN85278.1| phytochrome A, partial [Diplotaxis harra]
gi|345424350|gb|AEN85279.1| phytochrome A, partial [Diplotaxis harra]
Length = 599
Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/599 (84%), Positives = 552/599 (92%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+K+W+LG+TP+++ L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGITPSEYHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK+ D++ I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEPTDVNANII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|410718260|gb|AFV79506.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1060 bits (2742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/782 (64%), Positives = 617/782 (78%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTQLRIILNSSMTGQGTEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLKAL Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|410718120|gb|AFV79436.1| phytochrome N, partial [Pinus sylvestris]
gi|410718166|gb|AFV79459.1| phytochrome N, partial [Pinus sylvestris]
gi|410718254|gb|AFV79503.1| phytochrome N, partial [Pinus sylvestris]
gi|410718264|gb|AFV79508.1| phytochrome N, partial [Pinus sylvestris]
gi|410718298|gb|AFV79525.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1060 bits (2742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/782 (64%), Positives = 617/782 (78%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLK L Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKVLTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|315377361|gb|ADU05518.1| phytochrome A [Camelina alyssum]
Length = 599
Score = 1060 bits (2741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/599 (84%), Positives = 550/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVED+S++ VKRML AL+G EEQN+QFEIKT ++ + I+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDASVEIVKRMLENALEGTEEQNVQFEIKTQLTRADAGTISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|410718214|gb|AFV79483.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1060 bits (2741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/782 (64%), Positives = 617/782 (78%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTKLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLK L Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKVLTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|345424470|gb|AEN85339.1| phytochrome A, partial [Guiraoa arvensis]
Length = 599
Score = 1060 bits (2741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/599 (84%), Positives = 551/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLFSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
+RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 RRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SW+ EYH
Sbjct: 241 CDMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWMCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFW RS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWLRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELT L VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTNLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTL EDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLAEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|410718334|gb|AFV79543.1| phytochrome N, partial [Pinus sylvestris]
gi|410718338|gb|AFV79545.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1060 bits (2740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/782 (64%), Positives = 617/782 (78%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLK L Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKVLTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIESEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|410718286|gb|AFV79519.1| phytochrome N, partial [Pinus sylvestris]
gi|410718294|gb|AFV79523.1| phytochrome N, partial [Pinus sylvestris]
gi|410718300|gb|AFV79526.1| phytochrome N, partial [Pinus sylvestris]
gi|410718302|gb|AFV79527.1| phytochrome N, partial [Pinus sylvestris]
gi|410718304|gb|AFV79528.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1060 bits (2740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/782 (64%), Positives = 617/782 (78%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLNNLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLKAL Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|315377379|gb|ADU05527.1| phytochrome A [Crucihimalaya himalaica]
Length = 599
Score = 1060 bits (2740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/599 (84%), Positives = 551/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG+ T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGEAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+ KNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVGKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I +WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGSTPSEFHLQEIATWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFR TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISTKDMIFWFRPHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQ+ILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQIILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGK LTLVED+S++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKRLLTLVEDTSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADTGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424190|gb|AEN85199.1| phytochrome A, partial [Brassica spinescens]
Length = 602
Score = 1059 bits (2739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/602 (84%), Positives = 551/602 (91%), Gaps = 7/602 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD-------NT 353
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAANAPDSTT 180
Query: 354 LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
PQKR+RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQ
Sbjct: 181 APQKRRRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQ 240
Query: 414 TLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSE 473
TLLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP+++ L +I SWL E
Sbjct: 241 TLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSEYHLQEIASWLCE 300
Query: 474 YHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKH 533
YH DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH
Sbjct: 301 YHTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKH 360
Query: 534 EPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDT 593
+PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++T
Sbjct: 361 DPDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETGDVNT 420
Query: 594 KSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
K+IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAV DGLVNGWNTKIAELTGL
Sbjct: 421 KTIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVGSDGLVNGWNTKIAELTGLPA 480
Query: 654 DKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
D+AIGKH LTLVEDSS++ VKRML AL G EEQN+QFEIKTH S+ + PI+L+VNACA
Sbjct: 481 DEAIGKHLLTLVEDSSVEIVKRMLENALDGTEEQNVQFEIKTHLSRADAGPISLVVNACA 540
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
SRDLH+NVVGVCFVA D+T QKTVMDKFTR EGDYKAIVQNPNPLIPPIFG+DEFGWC E
Sbjct: 541 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRNEGDYKAIVQNPNPLIPPIFGTDEFGWCSE 600
Query: 774 WN 775
WN
Sbjct: 601 WN 602
>gi|410718132|gb|AFV79442.1| phytochrome N, partial [Pinus sylvestris]
gi|410718280|gb|AFV79516.1| phytochrome N, partial [Pinus sylvestris]
gi|410718312|gb|AFV79532.1| phytochrome N, partial [Pinus sylvestris]
gi|410718320|gb|AFV79536.1| phytochrome N, partial [Pinus sylvestris]
gi|410718322|gb|AFV79537.1| phytochrome N, partial [Pinus sylvestris]
gi|410718326|gb|AFV79539.1| phytochrome N, partial [Pinus sylvestris]
gi|410718340|gb|AFV79546.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/782 (64%), Positives = 617/782 (78%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+ P DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERSPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLKAL Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|345424578|gb|AEN85393.1| phytochrome A, partial [Sisymbrium altissimum]
Length = 598
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/598 (84%), Positives = 551/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFE TGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFEHTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRM VDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMTVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ E D +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDAPNSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+ P++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGIAPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIF +DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFCTDEFGWCSEWN 598
>gi|315377416|gb|ADU05545.1| phytochrome A [Arabidopsis thaliana]
Length = 599
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/599 (84%), Positives = 551/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLT CGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTWCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+EL+ Q++EKNI RTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNIXRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYHM
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHM 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
D TGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DLTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHP SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPTSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SK DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 YSKPNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|410718146|gb|AFV79449.1| phytochrome N, partial [Pinus sylvestris]
gi|410718170|gb|AFV79461.1| phytochrome N, partial [Pinus sylvestris]
gi|410718174|gb|AFV79463.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/782 (64%), Positives = 617/782 (78%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+D GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDGCGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLKAL Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|345424590|gb|AEN85399.1| phytochrome A, partial [Trachystoma labasii]
Length = 601
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/601 (85%), Positives = 553/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DD GEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDRGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTL-- 354
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+ + EG D+T
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEADGEGGDAPDSTTAQ 180
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D L +I SWL +Y
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDHHLQEIASWLCDY 300
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD D++TK
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEITDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|315377393|gb|ADU05534.1| phytochrome A [Schizopetalon walkeri]
Length = 599
Score = 1058 bits (2737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/599 (82%), Positives = 546/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GL+PYLGLHYPATDIPQAARFLF+KNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLDPYLGLHYPATDIPQAARFLFIKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG T PQ
Sbjct: 121 LQDEKLSVDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGSGPESTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q++EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQLVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPN+MDLVKCDGAALLY++KIW+LG+TP ++ L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNVMDLVKCDGAALLYQDKIWKLGITPTEYHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRISP+DMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISPRDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEM+AIHSLQLILRNAFKD + D++ K I
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMNAIHSLQLILRNAFKDSESSDVNAKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DL I+G++ELEAVTSEMVRLI+TATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLNIDGIQELEAVTSEMVRLIDTATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH L LVEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+ NACASRD
Sbjct: 481 IGKHLLELVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHRSGADAGPISLVANACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNP+PLIPPIFG+DEFGWC EWN
Sbjct: 541 SCENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPSPLIPPIFGTDEFGWCTEWN 599
>gi|345424178|gb|AEN85193.1| phytochrome A, partial [Brassica oleracea]
Length = 601
Score = 1058 bits (2737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/601 (84%), Positives = 555/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT++QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEE-EGD-----NTL 354
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGGEGDATPPDSTP 180
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EY
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEY 300
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEG+YKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGEYKAIIQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|315377359|gb|ADU05517.1| phytochrome A [Biscutella auriculata]
Length = 599
Score = 1058 bits (2737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/599 (84%), Positives = 549/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN----TLPQ 356
LQDEKL FDLTLCGSTLRAPHSCH QYM NM+SIASLVMAVVVN+E+EEGD T P
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHSQYMANMDSIASLVMAVVVNEEDEEGDTPDSTTQPL 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRISPKDMI WFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAAVRISPKDMIIWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL +LK++G++ELEAVTSEMVRLIETATVPILAVD DG VNGWNTKIAELTGL V++A
Sbjct: 421 HSKLNELKLDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVEEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH L LVEDSS++ VKRML ALQG EEQN+QFEIKT S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLALVEDSSVEIVKRMLQNALQGTEEQNVQFEIKTQLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
L +NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LQENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|410718346|gb|AFV79549.1| phytochrome N, partial [Pinus pinaster]
Length = 850
Score = 1058 bits (2736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/782 (64%), Positives = 617/782 (78%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL Q+ EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQMREKRILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEG 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LG TP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGATPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSCKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QKTVMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKTVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTQLRIILNSSMAGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLKAL Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S K + I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKELEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPGEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|410718148|gb|AFV79450.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1058 bits (2736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/782 (64%), Positives = 617/782 (78%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLKAL Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA Q+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALFQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|345424186|gb|AEN85197.1| phytochrome A, partial [Brassica spinescens]
Length = 602
Score = 1058 bits (2736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/602 (84%), Positives = 551/602 (91%), Gaps = 7/602 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT +QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTKVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAEHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD-------NT 353
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAANAPDSTT 180
Query: 354 LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQ
Sbjct: 181 APQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQ 240
Query: 414 TLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSE 473
TLLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG TP+++ L +I SWL E
Sbjct: 241 TLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGNTPSEYHLQEIASWLCE 300
Query: 474 YHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKH 533
YH DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH
Sbjct: 301 YHTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKH 360
Query: 534 EPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDT 593
+PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++T
Sbjct: 361 DPDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETGDVNT 420
Query: 594 KSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
K+IH+KL DLKI+G++ELEAVTSEMVRLIETATVPILAV DGLVNGWNTKIAELTGL V
Sbjct: 421 KTIHTKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVGSDGLVNGWNTKIAELTGLPV 480
Query: 654 DKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
D+AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACA
Sbjct: 481 DEAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACA 540
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
SRDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC E
Sbjct: 541 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSE 600
Query: 774 WN 775
WN
Sbjct: 601 WN 602
>gi|345424364|gb|AEN85286.1| phytochrome A, partial [Eruca vesicaria]
Length = 593
Score = 1058 bits (2735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/595 (84%), Positives = 544/595 (91%), Gaps = 4/595 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GL PYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLGPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN EE+E ++ PQKRKR
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVN-EEDEPESATPQKRKR 179
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRF PFPLRYACEFLAQVFAIHVNKE+E+E QI+EKNILRTQTLLCDML
Sbjct: 180 LWGLVVCHNTTPRFAPFPLRYACEFLAQVFAIHVNKEVEMENQIVEKNILRTQTLLCDML 239
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG TP++F L +I SWL EYH DSTG
Sbjct: 240 MRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQEIASWLCEYHTDSTG 299
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+KDD
Sbjct: 300 LSTDSLHDAGF--PRDLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDD 357
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTL-DLDTKSIHSK 599
R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD G +++T I+SK
Sbjct: 358 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGGEASEVNTNIIYSK 417
Query: 600 LCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGK 659
L DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+AIGK
Sbjct: 418 LNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGK 477
Query: 660 HFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHD 719
H LTLVEDSS++ VKRML AL+G EEQN+QF+IKTH S+ + PI+ +VNACAS+DLH+
Sbjct: 478 HLLTLVEDSSVEVVKRMLENALEGTEEQNVQFDIKTHLSRTDAGPISFVVNACASKDLHE 537
Query: 720 NVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
NVVGVCFVA D+T QKTVMDKFTR EGDYKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 538 NVVGVCFVAHDLTGQKTVMDKFTRKEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 592
>gi|345424512|gb|AEN85360.1| phytochrome A, partial [Morisia monanthos]
Length = 598
Score = 1058 bits (2735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/598 (84%), Positives = 552/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL D+TLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSSDITLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDASDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I WL E H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIALWLCECHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK+IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DG VNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS+D VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS+DL
Sbjct: 481 GKHLLTIVEDSSVDIVKRMLENALEGTEEQNVQFEIKTHLSRTDAGPISLVVNACASKDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DE GWC EWN
Sbjct: 541 HENVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDESGWCSEWN 598
>gi|410718128|gb|AFV79440.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1057 bits (2733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/782 (64%), Positives = 617/782 (78%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+ P DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERSPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLR+ACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRHACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQ 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
E+K HGS+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 IELKRHGSEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTQLRIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLKAL Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|345424540|gb|AEN85374.1| phytochrome A, partial [Raffenaldia primuloides]
Length = 601
Score = 1057 bits (2733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/601 (84%), Positives = 553/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT +QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTKVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD-----NTLP 355
LQD+KL FDLTLCGSTLRAPHSCHLQYM +M+SIASLVMAVVVN+E+ EGD T P
Sbjct: 121 LQDDKLSFDLTLCGSTLRAPHSCHLQYMADMDSIASLVMAVVVNEEDGEGDAPPDSTTQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIH NKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHANKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP+D+ L +I +WL EYH
Sbjct: 241 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDYHLQEIATWLCEYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD-VGTLDLDTK 594
D++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 DDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTTDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
+IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD
Sbjct: 421 TIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH L+LVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLSLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+N+VGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|345424514|gb|AEN85361.1| phytochrome A, partial [Morisia monanthos]
Length = 599
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/599 (84%), Positives = 551/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTLPQ 356
LQD+KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ E T PQ
Sbjct: 121 LQDDKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEAAPDSSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I WL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIALWLCECHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK+I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DG VNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LT+VEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTIVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|356556523|ref|XP_003546574.1| PREDICTED: phytochrome E-like [Glycine max]
Length = 1121
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/1057 (51%), Positives = 719/1057 (68%), Gaps = 39/1057 (3%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFE---TSGTSFDYSNSVRVSSTAGGD 58
S S A+S++NT + + ++AQ + DA++ A+FE SG SFDYS V S +
Sbjct: 13 SLSTSAESNTNTKRDK----ILAQYSADAEILAEFELSGVSGKSFDYSRMVLDPSRLVSE 68
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
Q+ TAYL IQ+G LIQPFGC+LA++E TF++I YS+N +LL + +
Sbjct: 69 QK------MTAYLSKIQRGGLIQPFGCMLAIEESTFRIIGYSDNCFQLLGLERQ----ID 118
Query: 119 DHPVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
+ IG D T+FT PS ++L KA E+SLLNPI V+ +T+ KPFYAI+HR+
Sbjct: 119 SKQFMNLIGVDATTLFTPPSGASLAKAAASREISLLNPIWVYARTTQKPFYAILHRIDVG 178
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++ID EP + + ++ AGA+QS KLA +AI+RLQSLP + LCDT+++EV +LTGYD
Sbjct: 179 VVIDLEPARMSDPTLSLAGAVQSQKLAVRAISRLQSLPGEDIGLLCDTVVEEVQKLTGYD 238
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIV-DCRAR 296
RVM YKFHEDDHGEVVSEI +S LEPYLGLHYPATDIPQA+RFLF +N+VRM++ DC A+
Sbjct: 239 RVMVYKFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQASRFLFKQNRVRMMICDCHAK 298
Query: 297 HVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ 356
VKV+Q E+L L L STLR PH CH QYM NM SIASLVMA++VN ++
Sbjct: 299 PVKVIQSEELRQPLCLVNSTLRLPHGCHTQYMANMGSIASLVMAIIVNGKDA-------- 350
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
RLWGL+VCH+T+PR V F +RYACEFL Q F + + E++L Q+ EK IL+TQTLL
Sbjct: 351 --TRLWGLLVCHHTSPRSVSFLVRYACEFLMQTFGLQLYMEIQLASQMAEKRILKTQTLL 408
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDML+RDAP GIV QSP+IMDLVKCDGAAL Y+ W LG TP + Q+ DI WL H
Sbjct: 409 CDMLLRDAPFGIVNQSPSIMDLVKCDGAALYYEGNCWLLGTTPTEAQVKDIAEWLLSNHG 468
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGL+ DSL DAGY GA +LGD VCGMA RI+ K +FWFRS TA EV+WGGAKH P+
Sbjct: 469 DSTGLTTDSLADAGYPGAASLGDAVCGMATARINSKHFLFWFRSHTAKEVKWGGAKHHPE 528
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDDG KM+PRSSFKAFLEVVK++SLPW+ E++AIHSLQLI+R++F+D T S
Sbjct: 529 DKDDGGKMNPRSSFKAFLEVVKSKSLPWEVLEINAIHSLQLIIRDSFQDTENTGPKTLSY 588
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
K D GM EL +V +MVRLIETATVPI VD+ G++NGWNTKIAELTGL +A
Sbjct: 589 VQK-SDTAAGGMDELSSVALQMVRLIETATVPIFGVDLGGVINGWNTKIAELTGLQASEA 647
Query: 657 IGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
+GK + ++ S DT K L ALQGQE++N++ +IK G + L+VNAC SR
Sbjct: 648 MGKSLVNEIIHADSGDTFKNTLSRALQGQEDKNVELKIKHFGLDQQQEVACLMVNACISR 707
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
D D +VGVCFV +DIT +K V DKF ++EGDYKAI+Q+ +PLIPPIF SDE C EWN
Sbjct: 708 DYTDAIVGVCFVGEDITYEKVVQDKFIKLEGDYKAIIQSLSPLIPPIFSSDENVCCSEWN 767
Query: 776 PAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPF 835
AM +LTGWKR+EVI KLL E+FG+ CRLK Q+ N I+L + +S QD EK+PF
Sbjct: 768 AAMERLTGWKRDEVIGKLLPGEIFGS---FCRLKGQDTLTNFMILLYRGISRQDSEKLPF 824
Query: 836 GFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKA 895
GFF RNG++ E + NKK+D G + G FCFLQ+ +L Q + ++ +
Sbjct: 825 GFFHRNGEFIETYITANKKIDAGGNMLGCFCFLQIVMPDLNQPSEEHNPRGRESISESEE 884
Query: 896 LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG 955
AY ++++ PL+GI F+RK++E T + QK+ L TS C+RQ+ I++D+ L SI +
Sbjct: 885 -AYILQEMKKPLNGIRFTRKLLENTTVSENQKQFLDTSDACERQIMAIIEDTHLGSINED 943
Query: 956 YLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADF 1015
L L + EF L +L A +SQVMM K +++ +E ++I +LYGD IRLQ VL+DF
Sbjct: 944 TLQLNVEEFVLGNILDAIVSQVMMLIREKNLQLFHEIPDEIKMLSLYGDQIRLQVVLSDF 1003
Query: 1016 L--SISINFVPNGG-QLMVSSSLTKDQLG-QSVHLAY 1048
L +S PNG ++ VS +L Q G + +HL +
Sbjct: 1004 LLNVVSHTASPNGWVEIKVSPTLKIIQDGDEFIHLQF 1040
>gi|315377389|gb|ADU05532.1| phytochrome A [Pachycladon exile]
Length = 599
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/599 (84%), Positives = 548/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGS ERL DTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSTERLWDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIA LVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIAPLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV QSPNIMDLVKCDGAALLYK +IW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVLQSPNIMDLVKCDGAALLYKGRIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
I KH LTLVEDSS++ VKRML AL+G EEQN++FEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IRKHLLTLVEDSSVEIVKRMLENALEGTEEQNVEFEIKTHLSRADTGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWN 599
>gi|345424366|gb|AEN85287.1| phytochrome A, partial [Eruca vesicaria]
Length = 591
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/593 (84%), Positives = 544/593 (91%), Gaps = 4/593 (0%)
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMA
Sbjct: 2 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 61
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKVL
Sbjct: 62 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKVL 121
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRL 361
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN EE+E ++ PQKRKRL
Sbjct: 122 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVN-EEDEPESATPQKRKRL 180
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+E+E QI+EKNILRTQTLLCDMLM
Sbjct: 181 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVEMENQIVEKNILRTQTLLCDMLM 240
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG TP++F L +I SWL EYH DSTGL
Sbjct: 241 RDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQEIASWLCEYHTDSTGL 300
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
S DSL+DAG+ LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+KDD
Sbjct: 301 STDSLHDAGF--PRDLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDDA 358
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTL-DLDTKSIHSKL 600
R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD G +++T I+SKL
Sbjct: 359 RRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGGEASEVNTNIIYSKL 418
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+AIGKH
Sbjct: 419 NDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGKH 478
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
LTLVEDSS++ VKRML AL+G EEQN+QF+IKTH S+ + PI+ +VNACAS+DLH+N
Sbjct: 479 LLTLVEDSSVEVVKRMLENALEGTEEQNVQFDIKTHLSRTDAGPISFVVNACASKDLHEN 538
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
VVGVCFVA D+T QKTVMDKFTR EGDYKAI+QNPNPLIPPIFG+DEFGWC E
Sbjct: 539 VVGVCFVAHDLTGQKTVMDKFTRKEGDYKAIIQNPNPLIPPIFGTDEFGWCSE 591
>gi|315377410|gb|ADU05542.1| phytochrome A [Wislizenia refracta]
Length = 601
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/602 (82%), Positives = 545/602 (90%), Gaps = 8/602 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRL SLPSGSMERLCDTM+QEVFEL GYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLHSLPSGSMERLCDTMVQEVFELMGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEV+SE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA+HVKV
Sbjct: 61 AYKFHDDDHGEVISEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL------ 354
LQD+KLPF+LTLCGSTLRAPHSCHLQYMENM SIASLVMA+VVN EEEEGD +
Sbjct: 121 LQDDKLPFELTLCGSTLRAPHSCHLQYMENMGSIASLVMAIVVN-EEEEGDGNVSDSSTP 179
Query: 355 -PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
PQKRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKELELE QI+EKNILRTQ
Sbjct: 180 PPQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQ 239
Query: 414 TLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSE 473
TLLCDMLMRDAPLGIV+QSPNIMDLV+CDGAALLYKNKIW+LG +P+DF +H+I SWL +
Sbjct: 240 TLLCDMLMRDAPLGIVSQSPNIMDLVRCDGAALLYKNKIWKLGKSPDDFHIHEIASWLCD 299
Query: 474 YHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKH 533
H DSTGLS DSLYDAG+ GA +LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAK+
Sbjct: 300 CHRDSTGLSTDSLYDAGFHGASSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKY 359
Query: 534 EPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDT 593
+P E+DD RKMHPRSSFKAFLEVVKTRSLPW +YEMDAIHSLQ+ILRN+ K+ T D+ T
Sbjct: 360 DPGEQDDARKMHPRSSFKAFLEVVKTRSLPWTNYEMDAIHSLQIILRNSLKESETDDMST 419
Query: 594 KSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
K +HSKL DL+++GM+ELEAVTSEMVRLIETA VPILAVD DGL+NGWNTKIAELTGLSV
Sbjct: 420 KVLHSKLNDLRLDGMQELEAVTSEMVRLIETANVPILAVDADGLINGWNTKIAELTGLSV 479
Query: 654 DKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
D+AI +H LTLVEDSS+ VK ML LAL G EEQN+QFEIKTHGS++ PI+L+VNACA
Sbjct: 480 DEAIERHLLTLVEDSSVQRVKTMLDLALDGTEEQNVQFEIKTHGSRMVGRPISLVVNACA 539
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
SRDL +NVVGVCFVAQD+T QK VMDKFTRIEGDYKAI+QNPNPL PPIFG+DEFGWC E
Sbjct: 540 SRDLEENVVGVCFVAQDLTVQKNVMDKFTRIEGDYKAIIQNPNPLXPPIFGTDEFGWCTE 599
Query: 774 WN 775
N
Sbjct: 600 XN 601
>gi|225463382|ref|XP_002271671.1| PREDICTED: phytochrome E [Vitis vinifera]
gi|183239020|gb|ACC60968.1| phytochrome E [Vitis vinifera]
Length = 1124
Score = 1056 bits (2731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/1036 (51%), Positives = 711/1036 (68%), Gaps = 36/1036 (3%)
Query: 23 IAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
IAQ DA+L A+FE SG SF+YS SV + + + Q AYL +Q+G L
Sbjct: 37 IAQYNADARLLAEFEQSGESGKSFNYSRSVMNAPESVPEDQ------IIAYLSRVQRGGL 90
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
+QPFGC+LA++E TF++I+YSEN+ + L + N + ++G+ D++T+FT PS++
Sbjct: 91 VQPFGCMLAIEEPTFRIISYSENSMDFLGL-NTLSETTQLKSLIGV--DVRTLFTPPSSA 147
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
+L KA E+SLLNPI VH +++ K FYAI+HR+ ++ID EP + + ++ AGA+Q
Sbjct: 148 SLAKAAMSREISLLNPIWVHSRSAQKTFYAILHRIDVGIVIDLEPTRSGDSALSLAGAVQ 207
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
S KLA +AI+RLQSLP G + LCDT++++V +LTGYDRVM YKFH+DDHGEVVSEI +S
Sbjct: 208 SQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRRS 267
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
LEPYLGLHYPATDIPQAARFLF +N+VR+I DC A+ V+V+Q E+L L L STLR+
Sbjct: 268 DLEPYLGLHYPATDIPQAARFLFKQNRVRIICDCNAKAVRVIQSEELKQPLCLVNSTLRS 327
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPL 379
PH CHLQYM NM IASL MAVV+N + +LWGLVVCH+T+PR+VPFPL
Sbjct: 328 PHGCHLQYMFNMGCIASLAMAVVINGNDA----------TKLWGLVVCHHTSPRYVPFPL 377
Query: 380 RYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLV 439
RYACEFL Q F + + EL+L Q+ EK ILR QTLLCDML+R+APLGIVT SP+IMDL+
Sbjct: 378 RYACEFLMQAFGLQLYMELQLASQLAEKKILRMQTLLCDMLLREAPLGIVTHSPSIMDLL 437
Query: 440 KCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGD 499
KCDGAAL Y + W LGVTP + Q+ DI WL H DSTGLS DSL DAGY GA LGD
Sbjct: 438 KCDGAALYYGGRCWLLGVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADAGYPGAALLGD 497
Query: 500 VVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKT 559
VCGMA RI+ KD + WFRS TA EV+WGGAKH P++KDDG +MHPRSSFKAFLEVVK+
Sbjct: 498 AVCGMATARITSKDFLLWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFKAFLEVVKS 557
Query: 560 RSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK-SIHSKLCDLKIEGMKELEAVTSEM 618
RSLPW+ +++AIHSLQLI+R++F+D+ D K +H++ D +++G+ EL +V EM
Sbjct: 558 RSLPWEVSDINAIHSLQLIMRDSFQDIE--DSSGKVMVHTQKYDSEMQGLNELGSVACEM 615
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL-TLVEDSSIDTVKRML 677
V+LIETAT PI VD G +NGWN KIAELTGL +A+GK + +V + V +L
Sbjct: 616 VKLIETATAPIFGVDSSGCINGWNAKIAELTGLQAKEAMGKSLVDEIVHEDLRGAVDNLL 675
Query: 678 YLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTV 737
ALQG+E++N++ ++K G D + ++VNAC SRD +++VGVCFV QDIT +K V
Sbjct: 676 CRALQGKEDKNVELKLKNFGLNQQDSALYIVVNACTSRDYTNDIVGVCFVGQDITSEKIV 735
Query: 738 MDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAE 797
MDKF R++GDYKAIVQ NPLIPPIF SD C EWN ++ KLTG R EVI K+L E
Sbjct: 736 MDKFIRLQGDYKAIVQCLNPLIPPIFASDGNACCSEWNTSLEKLTGCMRHEVIRKMLPGE 795
Query: 798 VFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDR 857
VFG C LK+Q+ I+L +A+SGQD EK PFGFF ++GK E LL NK+ D
Sbjct: 796 VFG---GLCPLKSQDTLTRFTILLYQAISGQDTEKFPFGFFDKSGKLVEVLLTANKRTDA 852
Query: 858 EGAVTGVFCFLQLASHELQQAL-HVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKM 916
G V G FCFLQ+ + + Q L H E + K LAY +++++NPL+GI F+ K+
Sbjct: 853 NGNVIGCFCFLQIDTPDKHQGLGHGPEYRE--CFSKFKELAYIRQEMKNPLNGIRFTHKL 910
Query: 917 MEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQ 976
+E T QK+ L TS C+RQ+ I+ D D+ I +G ++L + EF L VL A +SQ
Sbjct: 911 LETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEEGSMELNVEEFLLGNVLDAVVSQ 970
Query: 977 VMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG---QLMVSS 1033
VMM K +++V E E+I + L GD I+LQQVL+DFL ++ P+ ++ +S+
Sbjct: 971 VMMLLKEKKLQLVCEIPEEIKTLPLSGDQIKLQQVLSDFLHNIVHHAPSSDGWIEIKIST 1030
Query: 1034 SLTKDQ-LGQSVHLAY 1048
L Q + VHL +
Sbjct: 1031 GLKMIQDFNEFVHLQF 1046
>gi|345424516|gb|AEN85362.1| phytochrome A, partial [Morisia monanthos]
Length = 598
Score = 1056 bits (2731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/598 (84%), Positives = 552/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL D+TLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSSDITLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDASDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I WL E H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIALWLCECHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK+IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DG VNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS+DL
Sbjct: 481 GKHLLTIVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRTDAGPISLVVNACASKDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DE GWC EWN
Sbjct: 541 HENVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDESGWCSEWN 598
>gi|345424174|gb|AEN85191.1| phytochrome A, partial [Brassica oleracea]
Length = 600
Score = 1056 bits (2731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/600 (84%), Positives = 554/600 (92%), Gaps = 6/600 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT++QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEE-EGD-----NTL 354
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGGEGDATPPDSTP 180
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EY
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEY 300
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEG+YKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGEYKAIIQNPNPLIPPIFGTDEFGWCSEW 600
>gi|89330154|emb|CAJ80989.1| phytochrome A [Triphysaria pusilla]
Length = 609
Score = 1056 bits (2730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/609 (81%), Positives = 555/609 (91%), Gaps = 3/609 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGS+IIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GL+ Y GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDSYAGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
+KNKVRMI DCRA HVKV+QD+ LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ +E+G N+ P K+KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+EL
Sbjct: 181 VNEGDEDGPNSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA L++K K +RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIHKTKKYRLGMTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TASE+RWGGAKHEPD+KDDGRKMHPRSSFKAFL+VVKTRSLPWKD+EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 581 NAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
N+ K+ D+D K IH++L DL+++G +ELEAVTSEMVRLIETA+VPI AVDVDGLVN
Sbjct: 421 NSSNKEAEKRDVDGKEIHARLNDLQLDGKRELEAVTSEMVRLIETASVPIFAVDVDGLVN 480
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWNTKIA+LTGL VDKAIGKHFL LVEDS + V +ML ALQG EEQN+QFEIKTHG K
Sbjct: 481 GWNTKIADLTGLPVDKAIGKHFLALVEDSFAEAVNKMLGSALQGNEEQNVQFEIKTHGPK 540
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
+ +PI+LIVNACASRD+ +NVVGVCF+AQDIT Q ++MDKFTRIEGDY+AIVQNPN LI
Sbjct: 541 SDSNPISLIVNACASRDVKENVVGVCFIAQDITTQISMMDKFTRIEGDYRAIVQNPNQLI 600
Query: 760 PPIFGSDEF 768
PPIFGSDEF
Sbjct: 601 PPIFGSDEF 609
>gi|345424446|gb|AEN85327.1| phytochrome A, partial [Erucastrum cardaminoides]
Length = 601
Score = 1056 bits (2730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/601 (84%), Positives = 554/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG--DNTL---P 355
LQD+KL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE++ D+T P
Sbjct: 121 LQDDKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDAAPDSTTTAQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP+D+ L +I +WL +YH
Sbjct: 241 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDYHLQEIATWLCDYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL+DAG+ A ALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLHDAGFPRASALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGT-LDLDTK 594
D++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 DDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|345424182|gb|AEN85195.1| phytochrome A, partial [Brassica oleracea]
Length = 601
Score = 1055 bits (2729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/601 (84%), Positives = 554/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT++QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEE-EGD-----NTL 354
LQDEK DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T
Sbjct: 121 LQDEKPSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGGEGDATPPDSTP 180
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQT
Sbjct: 181 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EY
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEY 300
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEG+YKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGEYKAIIQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|345424560|gb|AEN85384.1| phytochrome A, partial [Rytidocarpus moricandioides]
Length = 595
Score = 1055 bits (2729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/595 (85%), Positives = 550/595 (92%), Gaps = 3/595 (0%)
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
PVKPYE PMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYK
Sbjct: 1 PVKPYEPPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYK 60
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VLQD
Sbjct: 61 FHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVLQD 120
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQKRKR 360
EKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQKRKR
Sbjct: 121 EKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQKRKR 180
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDML
Sbjct: 181 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIVTQSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH DSTG
Sbjct: 241 MRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTDSTG 300
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD++DD
Sbjct: 301 LSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDRDD 360
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++T I+SKL
Sbjct: 361 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETSDVNTNIIYSKL 420
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AIGKH
Sbjct: 421 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIGKH 480
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS+DLH N
Sbjct: 481 LLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASKDLHVN 540
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
VVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 VVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 595
>gi|345424510|gb|AEN85359.1| phytochrome A, partial [Morisia monanthos]
Length = 597
Score = 1055 bits (2728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/597 (84%), Positives = 551/597 (92%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL D+TLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSSDITLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDASDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNI DLVKCDGAALLYK+K+W+LG+TP+D+ L +I WL E H D
Sbjct: 241 DMLMRDAPLGIVSQSPNITDLVKCDGAALLYKDKVWKLGITPSDYHLQEIALWLCECHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK+IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DG VNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTIVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|345424432|gb|AEN85320.1| phytochrome A, partial [Erucastrum abyssinicum]
Length = 598
Score = 1055 bits (2728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/598 (84%), Positives = 551/598 (92%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGY RVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYGRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK+LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKKLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL E H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCECHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALTLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK+IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
KH L LVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 EKHLLALVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRGDTGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|89331047|emb|CAJ80890.1| phytochrome A [Boschniakia strobilacea]
Length = 608
Score = 1055 bits (2728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/608 (81%), Positives = 550/608 (90%), Gaps = 2/608 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LP GSMERL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPGGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV +EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVSTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HVKV+QDE L FDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEG--DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ E+G +++P KRK LWGLVVCHNT+PRFVPFPLRYACEFLAQVFAI+VNKE EL
Sbjct: 181 VNEGNEDGPDSSSVPDKRKTLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIYVNKEFEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCD+L+RDAPLGIV+QSPN+MD VKCDGA LLYKN +RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDPVKCDGAVLLYKNTKYRLGLTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GAL+L D VCGM AVRI+ +D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLCDAVCGMVAVRITERDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA+E++WGGAKHEP E DDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILR
Sbjct: 361 HTAAEIQWGGAKHEPGETDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 581 NAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNG 640
NAFK+ D +++ IH++L DL+I+G++E+EAVTSEMVRLIETA+VPI AVDVDGLVNG
Sbjct: 421 NAFKESEGRDSESREIHARLHDLQIDGVREIEAVTSEMVRLIETASVPIFAVDVDGLVNG 480
Query: 641 WNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKI 700
WNTKIA+LTGL VDKAIG HFL LVEDSS DTV +ML LALQG+EEQN+QFEIKTHG
Sbjct: 481 WNTKIADLTGLCVDKAIGWHFLALVEDSSADTVSKMLELALQGKEEQNVQFEIKTHGQTS 540
Query: 701 NDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIP 760
PITLIVNACASRD+ +NVVGVCF+AQDIT QK +MDKFTRIEGDY+ IVQNPNPLIP
Sbjct: 541 ESGPITLIVNACASRDVKENVVGVCFIAQDITTQKIMMDKFTRIEGDYRTIVQNPNPLIP 600
Query: 761 PIFGSDEF 768
PIFG+DEF
Sbjct: 601 PIFGTDEF 608
>gi|89331095|emb|CAJ80914.1| phytochrome A [Esterhazya campestris]
Length = 606
Score = 1055 bits (2727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/606 (81%), Positives = 553/606 (91%), Gaps = 3/606 (0%)
Query: 166 PFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT 225
PFYAI+HRVTGS+IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERLCDT
Sbjct: 1 PFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDT 60
Query: 226 MIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKN 285
M+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GLEPY+GLHYPATDIPQAARFLF+KN
Sbjct: 61 MVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLFIKN 120
Query: 286 KVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVND 345
KVRMI DCRA HVKV+QD+ LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VVVN+
Sbjct: 121 KVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNE 180
Query: 346 EEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQ 403
E+G ++ P K+KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVN+E+ELE Q
Sbjct: 181 GNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNREIELENQ 240
Query: 404 ILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQ 463
+LEKNILRTQTLLCDMLMRDAPLGIV+QSPN+MDLVKCDGA L+YK K +RLG+TP+DFQ
Sbjct: 241 MLEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGMTPSDFQ 300
Query: 464 LHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTA 523
+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ D +FWFRS TA
Sbjct: 301 IRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITNTDWLFWFRSHTA 360
Query: 524 SEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF 583
+E+RWGGAKHEP EKDDGRKMHPR SFKAFLEVVKTRSLPWKD+EMDAIHSLQLILRNA
Sbjct: 361 AEIRWGGAKHEPGEKDDGRKMHPRLSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAS 420
Query: 584 -KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWN 642
K+ D++ K IH++L DL+++G++ELEAVTSEMVRLIETA+VPI AVDVDGLVNGWN
Sbjct: 421 NKEAEEGDVEGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWN 480
Query: 643 TKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKIND 702
TKIA+LTGL+VDKAIG HFL LVEDSS + V +ML LALQG EE+N+QFEIKTHG +
Sbjct: 481 TKIADLTGLAVDKAIGTHFLALVEDSSAEAVNKMLELALQGNEERNVQFEIKTHGLRSES 540
Query: 703 DPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPI 762
PI+LIVNACASRD+ +NVVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN LIPPI
Sbjct: 541 APISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQLIPPI 600
Query: 763 FGSDEF 768
FG+DEF
Sbjct: 601 FGTDEF 606
>gi|345424572|gb|AEN85390.1| phytochrome A, partial [Sinapidendron angustifolium]
Length = 600
Score = 1054 bits (2726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/600 (84%), Positives = 555/600 (92%), Gaps = 5/600 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG--DNTL--PQ 356
LQD+KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE++ D+T PQ
Sbjct: 121 LQDDKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDASPDSTTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAP+GIV+QSPNIMDLVKCDGAALLYK+K+++LG+TP+D+ L +I SWL EYH
Sbjct: 241 CDMLMRDAPMGIVSQSPNIMDLVKCDGAALLYKDKVFKLGITPSDYHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGT-LDLDTKS 595
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTKI 420
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IHSKL DLKI+G++ELEAVT+EMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+
Sbjct: 421 IHSKLNDLKIDGIQELEAVTNEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 656 AIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
AIGKH LTLVEDSS + VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASR
Sbjct: 481 AIGKHLLTLVEDSSAEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 540
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
DLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 600
>gi|345424294|gb|AEN85251.1| phytochrome A, partial [Cordylocarpus muricatus]
Length = 599
Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/599 (85%), Positives = 550/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE----GDNTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE E T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEGEGEAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD A
Sbjct: 421 HSKLNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDDA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDK TRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKSTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|89331101|emb|CAJ80917.1| phytochrome A [Euphrasia regelii]
Length = 619
Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/619 (80%), Positives = 558/619 (90%), Gaps = 6/619 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLIIDFEPVKP+EVPMTAAGALQSYKLA+KAI+RLQSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFHEDDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QD LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VND-EEEEGDNTLPQ---KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ EE G + Q KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKEL
Sbjct: 181 VNEGNEEAGPDDSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
ELE Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA LL+KN+ RLG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+DFQ+ DIVSWL EYH DSTGLS D LYDAG+ GALALGDVVCGMAAVRI+ +D +FWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDGLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TASE+RWGGAKHE E+DDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHEQGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 579 LRNA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
LRNA K++ DL+ I ++L +L+I+G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIKTH
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + PI+LIVNACASRD+ +NVVGVCF+AQDIT QK+VMDKFTRIEGDY+AIVQNPN
Sbjct: 541 GPNSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEFGWCCEWN 775
P+IPPIFG+DEFGWC EWN
Sbjct: 601 PVIPPIFGTDEFGWCSEWN 619
>gi|345424296|gb|AEN85252.1| phytochrome A, partial [Cordylocarpus muricatus]
Length = 599
Score = 1053 bits (2723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/599 (85%), Positives = 550/599 (91%), Gaps = 4/599 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK G EPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGPEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE----GDNTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE E T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEGEGEAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD A
Sbjct: 421 HSKLNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDDA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424346|gb|AEN85277.1| phytochrome A, partial [Diplotaxis assurgens]
Length = 601
Score = 1053 bits (2722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/601 (84%), Positives = 553/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG--DNTL---P 355
LQD+KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE++ D+T P
Sbjct: 121 LQDDKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDAAPDSTTTAQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP+D+ L +I +WL +YH
Sbjct: 241 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDYHLQEIATWLCDYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL+DAG+ ALALGD VCGMAAVR+S KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRVSSKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGT-LDLDTK 594
D++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 DDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH L +VEDSS++ VKRML AL G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLEIVEDSSVEIVKRMLENALGGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|345424570|gb|AEN85389.1| phytochrome A, partial [Sinapidendron angustifolium]
Length = 600
Score = 1053 bits (2722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/600 (84%), Positives = 554/600 (92%), Gaps = 5/600 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTA GALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTATGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG--DNTL--PQ 356
LQD+KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE++ D+T PQ
Sbjct: 121 LQDDKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDASPDSTTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAP+GIV+QSPNIMDLVKCDGAALLYK+K+++LG+TP+D+ L +I SWL EYH
Sbjct: 241 CDMLMRDAPMGIVSQSPNIMDLVKCDGAALLYKDKVFKLGITPSDYHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGT-LDLDTKS 595
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTKI 420
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IHSKL DLKI+G++ELEAVT+EMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+
Sbjct: 421 IHSKLNDLKIDGIQELEAVTNEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 656 AIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
AIGKH LTLVEDSS + VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASR
Sbjct: 481 AIGKHLLTLVEDSSAEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 540
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
DLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 600
>gi|345424188|gb|AEN85198.1| phytochrome A, partial [Brassica spinescens]
Length = 602
Score = 1053 bits (2722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/602 (84%), Positives = 550/602 (91%), Gaps = 7/602 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
YKFH+DD GEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 TYKFHDDDRGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD-------NT 353
LQDEKL F+LTL GSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T
Sbjct: 121 LQDEKLSFELTLRGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAANAPDSTT 180
Query: 354 LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQ
Sbjct: 181 APQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQ 240
Query: 414 TLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSE 473
TLLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALL K K+W+LG+TP+++ L +I SWL E
Sbjct: 241 TLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLCKEKVWKLGITPSEYHLQEIASWLCE 300
Query: 474 YHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKH 533
YH DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH
Sbjct: 301 YHTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKH 360
Query: 534 EPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDT 593
+PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++T
Sbjct: 361 DPDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETGDVNT 420
Query: 594 KSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
K+IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAV DGLVNGWNTKIAELTGL V
Sbjct: 421 KTIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVGSDGLVNGWNTKIAELTGLPV 480
Query: 654 DKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
D+AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACA
Sbjct: 481 DEAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACA 540
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
SRDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC E
Sbjct: 541 SRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSE 600
Query: 774 WN 775
WN
Sbjct: 601 WN 602
>gi|345424444|gb|AEN85326.1| phytochrome A, partial [Erucastrum canariense]
Length = 601
Score = 1053 bits (2722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/601 (84%), Positives = 553/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG--DNTL---P 355
LQD+KL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE++ D+T P
Sbjct: 121 LQDDKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDAAPDSTTTAQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP+D+ L +I +WL +YH
Sbjct: 241 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDYHLQEIATWLCDYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL+DAG+ A ALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLHDAGFPRASALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGT-LDLDTK 594
D++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 DDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILA+D DGLVNGWNTKIAELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAIDSDGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|345424374|gb|AEN85291.1| phytochrome A, partial [Eruca vesicaria]
Length = 587
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/590 (84%), Positives = 541/590 (91%), Gaps = 4/590 (0%)
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFH+
Sbjct: 1 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHD 60
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKVLQDEKL
Sbjct: 61 DDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKVLQDEKL 120
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVV 366
FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN EE+E ++ PQKRKRLWGLVV
Sbjct: 121 SFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVN-EEDEPESATPQKRKRLWGLVV 179
Query: 367 CHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPL 426
CHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+E+E QI+EKNILRTQTLLCDMLMRDAPL
Sbjct: 180 CHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVEMENQIVEKNILRTQTLLCDMLMRDAPL 239
Query: 427 GIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSL 486
GIV+QSPNIMDLVKCDGAALLYK K+W+LG TP++F L +I SWL EYH DSTGLS DSL
Sbjct: 240 GIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQEIASWLCEYHTDSTGLSTDSL 299
Query: 487 YDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHP 546
+DAG+ LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+KDD R+MHP
Sbjct: 300 HDAGF--PRDLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDDARRMHP 357
Query: 547 RSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTL-DLDTKSIHSKLCDLKI 605
RSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD G +++T I+SKL DLKI
Sbjct: 358 RSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGGEASEVNTNIIYSKLNDLKI 417
Query: 606 EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLV 665
+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+AIGKH LTLV
Sbjct: 418 DGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGKHLLTLV 477
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
EDSS++ VKRML AL+G EEQN+QF+IKTH S+ + PI+ +VNACAS+DLH+NVVGVC
Sbjct: 478 EDSSVEVVKRMLENALEGTEEQNVQFDIKTHLSRTDAGPISFVVNACASKDLHENVVGVC 537
Query: 726 FVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
FVA D+T QKTVMDKFTR EGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 538 FVAHDLTGQKTVMDKFTRKEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 587
>gi|345424176|gb|AEN85192.1| phytochrome A, partial [Brassica oleracea]
Length = 599
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/599 (84%), Positives = 552/599 (92%), Gaps = 6/599 (1%)
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT++QEVFELTGYDRVMAY
Sbjct: 1 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVMAY 60
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +VLQ
Sbjct: 61 KFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVLQ 120
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEE-EGD-----NTLPQ 356
DEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQ
Sbjct: 121 DEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGGEGDATPPDSTPPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
LH+NVVGVCFVA D+T QKTVMDKFTRIEG+YKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGEYKAIIQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424442|gb|AEN85325.1| phytochrome A, partial [Erucastrum canariense]
Length = 601
Score = 1051 bits (2719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/601 (84%), Positives = 553/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG--DNTL---P 355
LQD+KL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE++ D+T P
Sbjct: 121 LQDDKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDAAPDSTTTAQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP+D+ L +I +WL +YH
Sbjct: 241 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDYHLQEIATWLCDYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL+DAG+ A ALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLHDAGFPRASALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGT-LDLDTK 594
D++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 DDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHS+L DLKI+G++ELEAVTSEMVRLIETATVPILA+D DGLVNGWNTKIAELTGL VD
Sbjct: 421 IIHSRLNDLKIDGIQELEAVTSEMVRLIETATVPILAIDSDGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|345424518|gb|AEN85363.1| phytochrome A, partial [Morisia monanthos]
Length = 598
Score = 1051 bits (2719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/598 (84%), Positives = 550/598 (91%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPY GLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYPGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL D+TLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSSDITLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDASDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRY CEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYVCEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I WL E H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIALWLCECHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYE DAIHSLQLILRNAFKD T D++TK+IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEKDAIHSLQLILRNAFKDGETTDVNTKTIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DG VNGWNTKIAEL+GL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELSGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTIVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 598
>gi|345424298|gb|AEN85253.1| phytochrome A, partial [Cordylocarpus muricatus]
Length = 599
Score = 1051 bits (2718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/598 (85%), Positives = 549/598 (91%), Gaps = 4/598 (0%)
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPY VPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMA
Sbjct: 2 FEPVKPYGVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 61
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VL
Sbjct: 62 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 121
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE----GDNTLPQK 357
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE E T PQK
Sbjct: 122 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEGEGEAPDSTTQPQK 181
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 182 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 241
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+K+W+LG TP++F L +I SWL EYH D
Sbjct: 242 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCEYHTD 301
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 302 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 361
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 362 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 421
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD AI
Sbjct: 422 SKLNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDDAI 481
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 482 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 541
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EWN
Sbjct: 542 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWN 599
>gi|345424438|gb|AEN85323.1| phytochrome A, partial [Erucastrum canariense]
gi|345424440|gb|AEN85324.1| phytochrome A, partial [Erucastrum canariense]
Length = 601
Score = 1051 bits (2718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/601 (84%), Positives = 553/601 (92%), Gaps = 6/601 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG--DNTL---P 355
LQD+KL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE++ D+T P
Sbjct: 121 LQDDKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDAAPDSTTTAQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP+D+ L +I +WL +YH
Sbjct: 241 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDYHLQEIATWLCDYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL+DAG+ A ALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLHDAGFPRASALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGT-LDLDTK 594
D++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 DDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD +GLVNGWNTKIAELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSEGLVNGWNTKIAELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEW 600
Query: 775 N 775
N
Sbjct: 601 N 601
>gi|315377412|gb|ADU05543.1| phytochrome A [Coincya sp. MAB-2010]
Length = 587
Score = 1051 bits (2717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/587 (85%), Positives = 539/587 (91%), Gaps = 4/587 (0%)
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
PYEVPMTAAGALQSYKLAAKAITRLQ LPSGSMERLCDTM+QEVFELTGYDRVMAYKFHE
Sbjct: 1 PYEVPMTAAGALQSYKLAAKAITRLQCLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHE 60
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VLQDEKL
Sbjct: 61 DDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVLQDEKL 120
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQKRKRLW 362
FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQKRKRLW
Sbjct: 121 SFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQKRKRLW 180
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVVCHNTTPRFVPFPLRYACEFLAQVF IHVNKE+ELE QI+EKNILRTQTLLCDMLMR
Sbjct: 181 GLVVCHNTTPRFVPFPLRYACEFLAQVFVIHVNKEVELENQIVEKNILRTQTLLCDMLMR 240
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
DAPLGIV+QSPNIMDLVKC GAALLYK+K W+LG+TP++F LH+I SWL E H DSTGLS
Sbjct: 241 DAPLGIVSQSPNIMDLVKCGGAALLYKDKAWKLGITPSEFHLHEIASWLCESHTDSTGLS 300
Query: 483 ADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+KDD R
Sbjct: 301 TDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDDAR 360
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD 602
+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF+D T D++TK IHSKL D
Sbjct: 361 RMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKIIHSKLND 420
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELT L VD+AIGKH L
Sbjct: 421 LKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTDLPVDEAIGKHLL 480
Query: 663 TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVV 722
TLVEDSS++ VKRML AL G EEQN+QFEIKTH S+ + PI+L+VNACASRDLH+NVV
Sbjct: 481 TLVEDSSVEIVKRMLENALDGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHENVV 540
Query: 723 GVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFG 769
GVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFG
Sbjct: 541 GVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFG 587
>gi|345424576|gb|AEN85392.1| phytochrome A, partial [Sisymbrium altissimum]
Length = 598
Score = 1050 bits (2714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/598 (84%), Positives = 549/598 (91%), Gaps = 3/598 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK G EPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGPEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ E D +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDAPNSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYA EFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYASEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGL DS +DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLGTDSSHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDHEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIE ATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIEAATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHPLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+D FGWC EWN
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDGFGWCSEWN 598
>gi|89331097|emb|CAJ80915.1| phytochrome A [Euphrasia alsa]
Length = 620
Score = 1049 bits (2713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/619 (79%), Positives = 557/619 (89%), Gaps = 6/619 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLIIDFEP+KP+EVPMTAAGALQSYKLA+KAI+R QSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPIKPHEVPMTAAGALQSYKLASKAISRFQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFHEDDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QD LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VND-EEEEGDNTLPQ---KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ EE G + Q KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKEL
Sbjct: 181 VNEGNEEAGPDDSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
ELE Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA LL+KN+ RLG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD+VCGMA+V+I+ +D +FWF
Sbjct: 301 PSDFQIRDIVSWLDEYHHDSTGLSTDSLYDAGFPGALALGDIVCGMASVKITDRDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TASE+RWGG+KHE E+DD RKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGSKHEQGERDDSRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 579 LRNA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
LRNA K++G DL+ I ++L +L+I+G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 LRNASSKEMGERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA LTGL VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEI+TH
Sbjct: 481 LVNGWNTKIANLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIRTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + PI+LIVNACASRD+ +NVVGVCF+AQDIT QK+VMDKFTRIEGDY+AIVQNPN
Sbjct: 541 GPNSDSSPISLIVNACASRDVQENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEFGWCCEWN 775
P+IPPIFG+DEFGWC EWN
Sbjct: 601 PVIPPIFGTDEFGWCSEWN 619
>gi|345424434|gb|AEN85321.1| phytochrome A, partial [Erucastrum abyssinicum]
Length = 590
Score = 1049 bits (2712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/595 (84%), Positives = 546/595 (91%), Gaps = 5/595 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQDE L FDLTLCGSTLRAPHSCHLQYM NM SIASLVMAVVVN EEE D T PQKRKR
Sbjct: 121 LQDENLSFDLTLCGSTLRAPHSCHLQYMANMGSIASLVMAVVVN--EEEDDATQPQKRKR 178
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDML
Sbjct: 179 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 238
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPNIMD+VKCDGAALLYK+K+W+LG TP++F L ++ SWL E+H DSTG
Sbjct: 239 MRDAPLGIVSQSPNIMDIVKCDGAALLYKDKVWKLGTTPSEFHLQELASWLCEHHADSTG 298
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD++DD
Sbjct: 299 LSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDDRDD 358
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD GT D++T IHSKL
Sbjct: 359 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD-GTTDVNTNVIHSKL 417
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
D I+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL+VD+AIGKH
Sbjct: 418 ND--IDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLTVDEAIGKH 475
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ PITL+VNACAS+DL +N
Sbjct: 476 LLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRTGAGPITLVVNACASKDLQEN 535
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
VVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DE GWC EWN
Sbjct: 536 VVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDESGWCSEWN 590
>gi|89330126|emb|CAJ80975.1| phytochrome A [Scrophularia arguta]
Length = 607
Score = 1048 bits (2711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/607 (79%), Positives = 548/607 (90%), Gaps = 1/607 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSL+IDFEPVKP+EVPMT AGALQSYKLA KAI R QSLPSGS+ERL
Sbjct: 1 SGKPFYAIIHRVTGSLVIDFEPVKPHEVPMTTAGALQSYKLAGKAINRSQSLPSGSVERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV +E+TK GLEPY GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMTYKFHDDDHGEVFTEVTKPGLEPYAGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HVKV+QDEKLPFDLTLCG TLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRAEHVKVVQDEKLPFDLTLCGPTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEE-GDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 401
+N+ EE + + PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE
Sbjct: 181 INEGAEEVSEPSSPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 402 YQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPND 461
Q+LE+NILRTQTLLCDML++DAPL IV+QSPN+MDLVKCDGAALLYKNK +RLG+TP D
Sbjct: 241 NQMLEENILRTQTLLCDMLLKDAPLAIVSQSPNVMDLVKCDGAALLYKNKRYRLGLTPTD 300
Query: 462 FQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQ 521
FQ+ D++SWL YH DSTG S DSLYDAG+ G+LALGD VCGMAAV+I+ KD +FWFRS
Sbjct: 301 FQIRDLLSWLDTYHRDSTGFSTDSLYDAGFPGSLALGDAVCGMAAVKITNKDWLFWFRSH 360
Query: 522 TASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 581
TA+E+RW GAKHEP EKDDGRKMHPRSSF+AFLEVVKT SLPWKDYEMDA+HSLQLILRN
Sbjct: 361 TAAEIRWSGAKHEPGEKDDGRKMHPRSSFRAFLEVVKTGSLPWKDYEMDAMHSLQLILRN 420
Query: 582 AFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGW 641
AF++ D +T++IH++L DL+++G+ ELEAVTSEMVRLIE A+VPILAVDVDG+VNGW
Sbjct: 421 AFREADAKDYETEAIHTRLNDLRVDGIHELEAVTSEMVRLIEAASVPILAVDVDGVVNGW 480
Query: 642 NTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKIN 701
NTKIA LTGL++D+AIG+ FL LVEDS D V +ML LALQG+EE N++FEIKTHGS+
Sbjct: 481 NTKIAALTGLTIDQAIGRDFLMLVEDSCADRVSKMLELALQGKEETNVEFEIKTHGSRSG 540
Query: 702 DDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPP 761
DPITLIVNACASRD+ +NV+G CF+AQDIT QK++MDK TRIEGDY+AIVQNPNPLIPP
Sbjct: 541 SDPITLIVNACASRDVKENVIGACFIAQDITDQKSMMDKSTRIEGDYRAIVQNPNPLIPP 600
Query: 762 IFGSDEF 768
IFG+DEF
Sbjct: 601 IFGTDEF 607
>gi|89331053|emb|CAJ80893.1| phytochrome A [Bungea trifida]
Length = 609
Score = 1048 bits (2710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/609 (80%), Positives = 548/609 (89%), Gaps = 3/609 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS+ERL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDT++QEVFELTGYDRVM Y+FH+DDHGEV +EITK GLEPY GLHYPATDIPQAARFLF
Sbjct: 61 CDTLVQEVFELTGYDRVMVYRFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA VKV+QD L FDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANQVKVVQDGNLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 V---NDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELE 399
N+EE D++ P KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKELE
Sbjct: 181 GYEGNEEESGSDSSQPDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELE 240
Query: 400 LEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTP 459
LE Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDG+ LL+K+K +RLG+TP
Sbjct: 241 LENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGSLLLHKDKKYRLGLTP 300
Query: 460 NDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFR 519
+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD +CGMAAVRI+ KD + WFR
Sbjct: 301 SDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFQGALALGDAICGMAAVRITDKDWLSWFR 360
Query: 520 SQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 579
S TA+E+RWGGAKHE EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL
Sbjct: 361 SHTAAEIRWGGAKHEQGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 420
Query: 580 RNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
RN+ K+ DLD+++IH KL +L+I GM+ELEAVTSEMVRLIETA+VPI AVD DGLVN
Sbjct: 421 RNSSKETKGKDLDSRAIHEKLNELQIGGMQELEAVTSEMVRLIETASVPIFAVDADGLVN 480
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWNTKI++LTGL VDK IG HFL LVE++S DTV +ML ALQG+EE+N+ FEIKTHG +
Sbjct: 481 GWNTKISDLTGLPVDKVIGTHFLGLVEETSADTVSKMLEFALQGKEERNVYFEIKTHGRR 540
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
PI+L+VNACASRD+ D+VVGVCF+AQDIT QK VMDKFTRIEGDY+AIVQNPNPLI
Sbjct: 541 SESGPISLVVNACASRDIKDSVVGVCFIAQDITTQKNVMDKFTRIEGDYRAIVQNPNPLI 600
Query: 760 PPIFGSDEF 768
PPIFG+DEF
Sbjct: 601 PPIFGTDEF 609
>gi|89331083|emb|CAJ80908.1| phytochrome A [Cordylanthus ramosus]
Length = 609
Score = 1048 bits (2710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/609 (80%), Positives = 553/609 (90%), Gaps = 3/609 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGS+IIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GL+PY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
+KNKVRMI DCRA HVKV+QD LPFDLTLCGSTLRAPHSCHLQYME+MNSIASLVM+VV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDNNLPFDLTLCGSTLRAPHSCHLQYMESMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ E+G ++ P K+KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA L++K+K +RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIHKSKKYRLGMTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TASE+RWGGAKHEP +KDDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHEPSDKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 581 NAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
N+ K+ D+ K IH++L DL+++G +ELEA+TSEMVRLIETA+VPI AVD+DGLVN
Sbjct: 421 NSSNKEAEERDVGGKEIHARLNDLQLDGKQELEALTSEMVRLIETASVPIFAVDMDGLVN 480
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWNTKIA+LTGL VDKAIG H L LVEDSS + V +ML LALQG EEQN+QF+IKTHG +
Sbjct: 481 GWNTKIADLTGLLVDKAIGMHLLALVEDSSAEAVNKMLELALQGNEEQNVQFDIKTHGPR 540
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
PI+LIVNACASRD+ +NVVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN LI
Sbjct: 541 SESGPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQLI 600
Query: 760 PPIFGSDEF 768
PPIFGSDEF
Sbjct: 601 PPIFGSDEF 609
>gi|89331055|emb|CAJ80894.1| phytochrome A [Castilleja crista-galli]
Length = 609
Score = 1048 bits (2710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/609 (80%), Positives = 554/609 (90%), Gaps = 3/609 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGS+IIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LP+GSMERL
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GL+PY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
+KNKVRMI DCRA HVKV+QD+ LPFDLTLCGS LRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSNLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ E+G ++ P K+K+LWGLVVCHNT+PRF+PFPLRYACEFLAQVFAIHVNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKQLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA L++K K +RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILIHKTKKYRLGMTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TAS +RWGGAKHEPD+KDDGRKMHPRSSFKAFL+VVKTRSLPWKD+EMDAIHSLQLILR
Sbjct: 361 HTASAIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 581 NAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
N+ K+ D++ K IH++L DL+++G KELEAVTSEMVRLIETA+VPI AVDVDG VN
Sbjct: 421 NSSNKEAEKRDVEGKEIHARLNDLQLDGKKELEAVTSEMVRLIETASVPIFAVDVDGHVN 480
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWNTKIA+LTGL VDKAIG+HFL LVEDSS + V +ML LALQG EEQN+QFEIKTHG +
Sbjct: 481 GWNTKIADLTGLPVDKAIGRHFLALVEDSSAEAVNKMLELALQGNEEQNVQFEIKTHGPR 540
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
PI+LIVNACASRD+ +NVVGVCF+AQD+T QK++MDKFTRIEGDY+AIVQNPN LI
Sbjct: 541 SESHPISLIVNACASRDVKENVVGVCFIAQDVTTQKSMMDKFTRIEGDYRAIVQNPNQLI 600
Query: 760 PPIFGSDEF 768
PPIFG+DEF
Sbjct: 601 PPIFGTDEF 609
>gi|345424436|gb|AEN85322.1| phytochrome A, partial [Erucastrum abyssinicum]
Length = 590
Score = 1048 bits (2710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/595 (84%), Positives = 547/595 (91%), Gaps = 5/595 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H++V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHLRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQDE L FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN EEE D T PQKRKR
Sbjct: 121 LQDENLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVN--EEEDDATQPQKRKR 178
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDML
Sbjct: 179 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 238
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPNIMD+VKCDGAALLYK+K+W+LG TP++F L ++ SWL E+H DSTG
Sbjct: 239 MRDAPLGIVSQSPNIMDIVKCDGAALLYKDKVWKLGTTPSEFHLQELASWLCEHHADSTG 298
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD++DD
Sbjct: 299 LSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDDRDD 358
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD GT D++T IHSKL
Sbjct: 359 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD-GTTDVNTNVIHSKL 417
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
D I+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL+VD+AIGKH
Sbjct: 418 ND--IDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLTVDEAIGKH 475
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ PITL+VNACAS+DL +N
Sbjct: 476 LLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRTGAGPITLVVNACASKDLQEN 535
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
VVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DE GWC EWN
Sbjct: 536 VVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDESGWCSEWN 590
>gi|89331065|emb|CAJ80899.1| phytochrome A [Castilleja rubicundula]
Length = 609
Score = 1048 bits (2709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/609 (80%), Positives = 552/609 (90%), Gaps = 3/609 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTG +IIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGGMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GL+ Y GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDSYAGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
+KNKVRMI DCRA HVKV+QD+ +PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNIPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ E+G ++ P K+KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCDML+RDAPLGI +QSPN+MDLVKCDGA L++K K +RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIESQSPNVMDLVKCDGAVLIHKTKKYRLGMTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TASE+RWGGAK EPD+KDDGRKMHPRSSFKAFL+VVKTRS+PWKD+EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKREPDDKDDGRKMHPRSSFKAFLDVVKTRSMPWKDFEMDAIHSLQLILR 420
Query: 581 NAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
N+ K+ G D+D K IH++L DL+++G +ELEAVTSEMVRLIETA+VPI AVDVDGLVN
Sbjct: 421 NSSNKEAGKRDVDGKEIHARLNDLQLDGKRELEAVTSEMVRLIETASVPIFAVDVDGLVN 480
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWNTKIA+LTGL VDKAIG+HFL LVEDS + V +ML LALQG EEQN+QFEIKTHG +
Sbjct: 481 GWNTKIADLTGLPVDKAIGRHFLALVEDSFAEAVNKMLELALQGNEEQNVQFEIKTHGPR 540
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
+PI+LIVNAC+SRD+ +NVVGVCF+AQDIT Q ++MDKFTRIEGDYKAIVQNPN LI
Sbjct: 541 SESNPISLIVNACSSRDVKENVVGVCFIAQDITTQISMMDKFTRIEGDYKAIVQNPNQLI 600
Query: 760 PPIFGSDEF 768
PPIFGSDEF
Sbjct: 601 PPIFGSDEF 609
>gi|356555999|ref|XP_003546315.1| PREDICTED: phytochrome B-like isoform 2 [Glycine max]
Length = 867
Score = 1048 bits (2709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/873 (56%), Positives = 649/873 (74%), Gaps = 9/873 (1%)
Query: 86 LLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH--PVLGIGSDIKTIFTAPSASALQK 143
++A+DE +F+++AYS+NA ++L + +VPS+ D +G+DI+T+FT SA L+K
Sbjct: 1 MIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSSAVLLEK 60
Query: 144 ALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKL 203
A E+SL+NPI +H +TSGKPFY I+HR+ ++ID EP + + ++ AGA+QS KL
Sbjct: 61 AFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKL 120
Query: 204 AAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEP 263
A +AI++LQSLP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEVV+E + LEP
Sbjct: 121 AVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETKRPDLEP 180
Query: 264 YLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSC 323
Y+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V+QDE L L L GSTLRAPH C
Sbjct: 181 YIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPHGC 240
Query: 324 HLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYAC 383
H QYM NM S ASLVMAV++N +EEG + RLWGLVVCH+T+ R +PFPLRYAC
Sbjct: 241 HAQYMANMGSTASLVMAVIINGNDEEGVGG--RTSMRLWGLVVCHHTSARCIPFPLRYAC 298
Query: 384 EFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDG 443
EFL Q F + +N EL+L Q LEK +LRTQTLLCDML+RD+P GIVTQSP+IMDLVKCDG
Sbjct: 299 EFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDG 358
Query: 444 AALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCG 503
AAL Y+ + LGVTP + Q+ DI+ WL +H DSTGLS DSL DAGY GA +LGD VCG
Sbjct: 359 AALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLGDAVCG 418
Query: 504 MAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLP 563
MA I+ KD +FWFRS TA E++WGGAKH P++KDDG++MHPRSSFKAFLEVVK+RSLP
Sbjct: 419 MAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLP 478
Query: 564 WKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIE 623
W++ EMDAIHSLQLILR++FKD + + ++ +L+++G+ EL +V EMVRLIE
Sbjct: 479 WENAEMDAIHSLQLILRDSFKDAEHSN-SKAVLDPRMSELELQGVDELSSVAREMVRLIE 537
Query: 624 TATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQ 682
TAT PI AVDVDG +NGWN K++ELTGL V++A+GK + LV S +TV ++L AL+
Sbjct: 538 TATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLSRALK 597
Query: 683 GQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFT 742
G+E++N++ +++T G + + + ++VNAC+S+D +NVVGVCFV QD+T QK VMDKF
Sbjct: 598 GEEDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQKIVMDKFI 657
Query: 743 RIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTN 802
I+GDYKAIV NPNPLIPPIF SD+ C EWN AM KLTGW R +VI K+L+ EVFG+
Sbjct: 658 NIQGDYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLVGEVFGS- 716
Query: 803 MACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVT 862
CC+LK ++ IVL+ A+ G D ++ PF F R GK+ + L NK+++ +G +
Sbjct: 717 --CCQLKGSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMDGQII 774
Query: 863 GVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTEL 922
G FCFLQ+ S ELQQAL QR E+ + R+K LAY + ++NPLSGI F+ ++E T L
Sbjct: 775 GAFCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLEATCL 834
Query: 923 GAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG 955
EQK+ L TSA C++Q+ KI+ D D++SI DG
Sbjct: 835 SNEQKQFLETSAACEKQMLKIIHDVDIESIEDG 867
>gi|1730566|sp|P55004.1|PHYE_IPONI RecName: Full=Phytochrome E
gi|1145714|gb|AAA84970.1| phytochrome E [Ipomoea nil]
Length = 1115
Score = 1047 bits (2708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/1029 (51%), Positives = 705/1029 (68%), Gaps = 38/1029 (3%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGDQQ 60
S A S+ NTGK+ IAQ DAKL A+FE S G SFDYS SV + Q
Sbjct: 11 SSSATSNLNTGKA------IAQYNADAKLMAEFEQSRESGKSFDYSRSVIHAP------Q 58
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++ TAYL IQ+G LIQPFGC+LA++E +FK++ +SEN +LL + + P
Sbjct: 59 NVTEEEMTAYLSRIQRGGLIQPFGCMLAIEEPSFKIVGFSENCFDLLGLKSGVEPP---E 115
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
+ IG D +T+FT S ++L KA+ E+SLLNPI VH K + KPFYA++HR+ ++I
Sbjct: 116 RMSLIGIDARTLFTLSSRASLAKAVASREISLLNPIWVHSKINQKPFYAVLHRIDVGIVI 175
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
D EP + + AGA+QS KLA +AI+RLQSLP G + LCDT++++V +LTGYDRVM
Sbjct: 176 DLEPANSADPALLLAGAVQSQKLAVRAISRLQSLPGGDIGTLCDTVVEDVQKLTGYDRVM 235
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
YKFH+D HGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A+ VKV
Sbjct: 236 VYKFHDDSHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNAQPVKV 295
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQ E+L L L STLR+PH CH +YM NM SIASLVMAVV+N E +
Sbjct: 296 LQCEELKQPLCLVNSTLRSPHGCHTKYMANMGSIASLVMAVVINSSES----------MK 345
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCH+T+PR+VPFPLRYACEFL Q F++ + EL+L Q+ EK IL+TQTLLCDML
Sbjct: 346 LWGLVVCHHTSPRYVPFPLRYACEFLMQAFSLQLYMELQLASQLAEKKILQTQTLLCDML 405
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
+RDAP GIVTQ+P+IMDLV+CDGAAL Y K W LGVTP + Q+ DI WL H DSTG
Sbjct: 406 LRDAPFGIVTQTPSIMDLVRCDGAALYYNGKCWLLGVTPTETQVKDIAEWLLHNHGDSTG 465
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS D L DAGY GA LGD V GMA RI+ KD +FWFRS TA EV+WGGAKH P++KDD
Sbjct: 466 LSTDCLSDAGYPGAPLLGDAVSGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDD 525
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
G +MHPRSSF AFLEVVK+RSLPW+D E++AIHSLQLI+R++ + +G + KS+ S
Sbjct: 526 GGRMHPRSSFIAFLEVVKSRSLPWEDSEINAIHSLQLIMRDSLQGIGENYM--KSVSSPQ 583
Query: 601 CDLKIEGMK--ELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
+ +G++ EL ++ E+VRL+ETATVPI VD GL+NGWN KIAELTGL + AIG
Sbjct: 584 QN-DSDGVRFYELSSMALELVRLVETATVPIFGVDSSGLINGWNAKIAELTGLQANVAIG 642
Query: 659 KHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
K+ + + + S +T K ++ ALQG+E++N++ ++ G+ + + L+VNAC SRD
Sbjct: 643 KYLIDDVTHEDSHETFKALMCRALQGEEDRNVEVKLLKFGNHPTKEVVYLVVNACTSRDY 702
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPA 777
++++GVCFV QDITP+K VMDKF R++GDY+AI+Q+ NPLIPPIF SDE C EWN A
Sbjct: 703 KNDIIGVCFVGQDITPEKAVMDKFVRLQGDYEAIIQSLNPLIPPIFASDENACCSEWNAA 762
Query: 778 MVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGF 837
M +LTG + EVI K L E+FG CRLK Q+A I+L + +SG D EK+ FGF
Sbjct: 763 MERLTGLVKCEVIGKRLPGEIFG---GLCRLKGQDALTKFMILLYQGISGHDTEKLSFGF 819
Query: 838 FARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALA 897
F R G + + + NK+ D G + G FCFLQ + + Q ++ L LK A
Sbjct: 820 FDRKGNFIDVFITANKRTDERGNIIGCFCFLQTMAVDHPQISARDIEDDRECLSTLKEFA 879
Query: 898 YTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG-Y 956
Y ++Q++NPL+GI F+ K++EGT QK+ L TS C++Q+ I+++ D I+DG
Sbjct: 880 YIQQQMKNPLNGIRFTHKLLEGTVTSDHQKQFLETSEACEKQILSIIENMDSGGIVDGNR 939
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
++L+ EF + V+ A +SQVM+ K ++++++ +QI S +YGD I+LQ VL+DFL
Sbjct: 940 VELKTEEFVIGNVIDAVVSQVMIPLKEKNLQLLHDIPDQIKSLPIYGDQIKLQLVLSDFL 999
Query: 1017 SISINFVPN 1025
+ P+
Sbjct: 1000 LSIVRHAPS 1008
>gi|345424358|gb|AEN85283.1| phytochrome A, partial [Enarthrocarpus lyratus]
Length = 597
Score = 1047 bits (2708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/597 (84%), Positives = 549/597 (91%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN--TLPQKR 358
LQDEKL FDLTLCGSTLRAPH CHLQYM NM+SIASLVMAVVVN+E+ E + T PQKR
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHICHLQYMANMDSIASLVMAVVVNEEDGEAPDSTTQPQKR 180
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCD
Sbjct: 181 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCD 240
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
MLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TPN+F L +I SWL E+H DS
Sbjct: 241 MLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPNEFHLQEIASWLCEHHRDS 300
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL+DAG+ ALALGD VCGMAAVRIS DMIFWFRS TA EVRWGGAKH+PD++
Sbjct: 301 TGLSTDSLHDAGFPRALALGDSVCGMAAVRISSTDMIFWFRSHTAGEVRWGGAKHDPDDR 360
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVG-TLDLDTKSIH 597
DD R+MHPRSSFKAFLEVVKTRSLPW+DYEMDAIHSLQLILRNAFKD G T D++ IH
Sbjct: 361 DDARRMHPRSSFKAFLEVVKTRSLPWRDYEMDAIHSLQLILRNAFKDGGETTDVNANVIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL+VD+AI
Sbjct: 421 SKLNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLTVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EE N+QFEIKTH S+ + PI+L+VNACAS+DL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEHNVQFEIKTHLSRTDAGPISLVVNACASKDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+++VVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 NEHVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|89331063|emb|CAJ80898.1| phytochrome A [Castilleja miniata]
Length = 609
Score = 1047 bits (2707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/609 (80%), Positives = 553/609 (90%), Gaps = 3/609 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGS+IIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LP+GSMERL
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GL+PY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
+KNKVRMI DCRA HVKV+QD+ LPFDLTLCGS LRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSNLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ E+G N+ P K+K+LWGLVVCHNT+PRF+PFPLRYACEFLAQVFAIHVNKE+EL
Sbjct: 181 VNEGNEDGPNSSSHPDKKKQLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA L++K K +RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILIHKTKKYRLGMTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TAS +RWGGAKHEPD+KDDGRKMHPRSSFKAFL+VVKTRSL WKD+EMDAIHSLQLILR
Sbjct: 361 HTASTIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLSWKDFEMDAIHSLQLILR 420
Query: 581 N-AFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
N + K+ D++ K IH++L DL+++G KELEAVTSEMVRLIETA+VPI AVDVDG VN
Sbjct: 421 NSSSKEAEKGDVEGKEIHARLNDLQLDGKKELEAVTSEMVRLIETASVPIFAVDVDGHVN 480
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWNTKIA+LTGL VDKAIG+HFL LVEDSS + V +ML LALQG EEQN+QFEIKTHG +
Sbjct: 481 GWNTKIADLTGLPVDKAIGRHFLALVEDSSAEAVNKMLELALQGNEEQNVQFEIKTHGPR 540
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
PI+LIVNACASRD+ +NVVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN LI
Sbjct: 541 SESHPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQLI 600
Query: 760 PPIFGSDEF 768
PPIFG+DEF
Sbjct: 601 PPIFGTDEF 609
>gi|89331099|emb|CAJ80916.1| phytochrome A [Euphrasia collina]
Length = 621
Score = 1047 bits (2707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/619 (79%), Positives = 556/619 (89%), Gaps = 6/619 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLIIDFEPVKP+EVPMTAAGALQSYKLA+KAI+R QSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRFQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFHEDDHGEV++EITK GLEPY+GLHYPATD+PQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDVPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QD LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEG--DNTLPQ--KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ EE DN+ KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKEL
Sbjct: 181 VNEGNEEAGPDNSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
ELE Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA LL+KN+ RLG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+DFQ+ DIVSWL EY DSTGLS DSLYDAG+ GAL+LGD VCGMAAV+I+ +D +FWF
Sbjct: 301 PSDFQIRDIVSWLDEYRHDSTGLSTDSLYDAGFPGALSLGDNVCGMAAVKITDRDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TASE+RWGG+KHE E+DD RKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGSKHEQGERDDSRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 579 LRNA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
LRNA K++G DL++ I ++L +L+I+G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 LRNASSKEMGERKDLESVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA LTGL VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIKTH
Sbjct: 481 LVNGWNTKIANLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + PI+LIVNACASRD+ +NVVGVCF+AQDIT QK+VMDKFTRIEGDY+AIVQNPN
Sbjct: 541 GPNSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEFGWCCEWN 775
P+IPPIFG+DEFGWC EWN
Sbjct: 601 PVIPPIFGTDEFGWCSEWN 619
>gi|345424306|gb|AEN85257.1| phytochrome A, partial [Crambe hispanica subsp. abyssinica]
Length = 597
Score = 1047 bits (2707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/597 (84%), Positives = 549/597 (91%), Gaps = 3/597 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYK AAKAITRL+SLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKHAAKAITRLESLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQK 357
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQK
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGEAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+M PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD D++TK I+
Sbjct: 361 RDDARRMPPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEATDVNTKIIY 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
+ VV VCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EW
Sbjct: 541 RETVVRVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEW 597
>gi|190586169|gb|ACE79201.1| phytochrome B-4 [Glycine max]
Length = 867
Score = 1046 bits (2705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/873 (56%), Positives = 648/873 (74%), Gaps = 9/873 (1%)
Query: 86 LLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH--PVLGIGSDIKTIFTAPSASALQK 143
++A+DE +F+++AYS+NA ++L + +VPS+ D +G+DI+T+FT SA L+K
Sbjct: 1 MIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSSAVLLEK 60
Query: 144 ALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKL 203
A E+SL+NPI +H +TSGKPFY I+HR+ ++ID EP + + ++ AGA+QS KL
Sbjct: 61 AFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKL 120
Query: 204 AAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEP 263
A +AI++LQSLP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEVV+E + LEP
Sbjct: 121 AVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETKRPDLEP 180
Query: 264 YLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSC 323
Y+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V+QDE L L L GSTLRAPH C
Sbjct: 181 YIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPHGC 240
Query: 324 HLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYAC 383
H QYM NM S ASLVMAV++N +EEG + RLWGLV+CH+T+ R +PFPLRYAC
Sbjct: 241 HAQYMANMGSTASLVMAVIINGNDEEGVGG--RTSMRLWGLVICHHTSARCIPFPLRYAC 298
Query: 384 EFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDG 443
EFL Q F + +N EL+L Q LEK +LRTQTLLCDML+RD+P GIVTQSP+IMDLVKCDG
Sbjct: 299 EFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDG 358
Query: 444 AALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCG 503
AAL Y+ + LGVTP + Q+ DI+ WL +H DSTGLS DSL DAGY GA +LGD VCG
Sbjct: 359 AALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLGDAVCG 418
Query: 504 MAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLP 563
MA I+ KD +FWFRS TA E++WGGAKH P++KDDG++MHPRSSFKAFLEVVK+RSLP
Sbjct: 419 MAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLP 478
Query: 564 WKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIE 623
W+ EMDAIHSLQLILR++FKD + + ++ +L+++G+ EL +V EMVRLIE
Sbjct: 479 WESAEMDAIHSLQLILRDSFKDAEHSN-SKAVLDPRMSELELQGVDELSSVAREMVRLIE 537
Query: 624 TATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQ 682
TAT PI AVDVDG +NGWN K++ELTGL V++A+GK + LV S +TV ++L AL+
Sbjct: 538 TATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLSRALK 597
Query: 683 GQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFT 742
G+E++N++ +++T G + + + ++VNAC+S+D +NVVGVCFV QD+T QK VMDKF
Sbjct: 598 GEEDKNVEIKMRTFGPEHQNKAVFVVVNACSSKDYTNNVVGVCFVGQDVTGQKIVMDKFI 657
Query: 743 RIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTN 802
I+GDYKAIV NPNPLIPPIF SD+ C EWN AM KLTGW R +VI K+L+ EVFG+
Sbjct: 658 NIQGDYKAIVHNPNPLIPPIFASDDNTCCLEWNTAMEKLTGWSRADVIGKMLVGEVFGS- 716
Query: 803 MACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVT 862
CC+LK ++ IVL+ A+ G D ++ PF F R GK+ + L NK+++ +G +
Sbjct: 717 --CCQLKGSDSITKFMIVLHNALGGHDTDRFPFSFLDRYGKHVQAFLTANKRVNMDGQII 774
Query: 863 GVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTEL 922
G FCFLQ+ S ELQQAL QR E+ + R+K LAY + ++NPLSGI F+ ++E T L
Sbjct: 775 GAFCFLQIVSPELQQALKAQRQQEKNSFARMKELAYICQGVKNPLSGIRFTNSLLEATCL 834
Query: 923 GAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG 955
EQK+ L TSA C++Q+ KI+ D D++SI DG
Sbjct: 835 SNEQKQFLETSAACEKQMLKIIHDVDIESIEDG 867
>gi|345424362|gb|AEN85285.1| phytochrome A, partial [Eruca pinnatifida]
Length = 594
Score = 1045 bits (2703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/594 (84%), Positives = 545/594 (91%), Gaps = 4/594 (0%)
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFH
Sbjct: 1 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFH 60
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VLQDEK
Sbjct: 61 DDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVLQDEK 120
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQKRKRL 361
L FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG+ T PQKRKRL
Sbjct: 121 LSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGEAPDSTTAPQKRKRL 180
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDMLM
Sbjct: 181 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDMLM 240
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL EYH DSTGL
Sbjct: 241 RDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCEYHTDSTGL 300
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
S DSL+DAG+ A ALGD VCGMAAVRIS KDMIFWFRS TA EVRWGG KH+PD++DD
Sbjct: 301 STDSLHDAGFPRAQALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGTKHDPDDRDDA 360
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLC 601
R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK+ T D++TK IHSKL
Sbjct: 361 RRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGETADMNTKIIHSKLN 420
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AIGKH
Sbjct: 421 DLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIGKHL 480
Query: 662 LTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
LTLVEDSS+ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDLH+NV
Sbjct: 481 LTLVEDSSVGIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHENV 540
Query: 722 VGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
VGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+D FG C EWN
Sbjct: 541 VGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDVFGGCSEWN 594
>gi|89331059|emb|CAJ80896.1| phytochrome A [Castilleja exserta]
Length = 609
Score = 1045 bits (2702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/609 (80%), Positives = 552/609 (90%), Gaps = 3/609 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGS+IIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LP+GSMERL
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GL+PY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
+KNKVRMI DCRA HVKV+QD LPFDLTLCGS LRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDANLPFDLTLCGSNLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ E+G ++ P K+KRLWGLVVCHNT+PRFVPFPLRYACE LAQVFAIHVNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACELLAQVFAIHVNKEIEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCDMLMRDAPLGIV+QSPN+MDLVKCDGA L++K K +RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAILIHKAKKYRLGMTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TASE+RWGGA++EP +KDDGRKMHPRSSFKAFL+VVKTRSLPWKD+EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGARNEPGDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 581 NAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
N+ K+ D++ K IH++L DL+++G KELEAVTSEMVRLIETA+VPI AVDVDGLVN
Sbjct: 421 NSSNKEAEKRDVEGKEIHARLNDLQLDGKKELEAVTSEMVRLIETASVPIFAVDVDGLVN 480
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWNTKIA+LTGL VDKAIG+HFL LVEDS + V +ML LALQG EEQN+QFEIKTHG +
Sbjct: 481 GWNTKIADLTGLPVDKAIGRHFLALVEDSFAEAVNKMLELALQGNEEQNVQFEIKTHGPR 540
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
+PI+LIVNACASRD+ +NVVGVCF+AQDIT Q ++MDKFTRIEGDY+AIVQNPN LI
Sbjct: 541 SESNPISLIVNACASRDVKENVVGVCFIAQDITTQISMMDKFTRIEGDYRAIVQNPNQLI 600
Query: 760 PPIFGSDEF 768
PPIFGSDEF
Sbjct: 601 PPIFGSDEF 609
>gi|147775698|emb|CAN62723.1| hypothetical protein VITISV_030984 [Vitis vinifera]
Length = 1162
Score = 1045 bits (2702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/1037 (51%), Positives = 705/1037 (67%), Gaps = 37/1037 (3%)
Query: 23 IAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
IAQ DA+L A+FE SG SF+YS SV + + + Q AYL Q+G L
Sbjct: 37 IAQYNADARLLAEFEQSGESGKSFNYSRSVMNAPESVPEDQ------IIAYLSRXQRGGL 90
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
+QPFGC+LA++E TF++I+YSEN+ + L + + + L IG D++T+FT PS++
Sbjct: 91 VQPFGCMLAIEEPTFRIISYSENSMDFLGL--NTLSETTQLKSL-IGVDVRTLFTPPSSA 147
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
+L KA E+SLLNPI VH +++ K FYAI+HR+ ++ID EP + + ++ AGA+Q
Sbjct: 148 SLAKAAMSREISLLNPIWVHSRSAQKTFYAILHRIDVGIVIDLEPTRSGDXALSLAGAVQ 207
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
S KLA +AI+RLQSLP G + LCDT++++V +LTGYDRVM YKFH+DDHGEVVSEI +S
Sbjct: 208 SQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRRS 267
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
LEPYLGLHYPATDIPQAARFLF +N VR+I DC A+ V+V+Q E+L L L STLR+
Sbjct: 268 DLEPYLGLHYPATDIPQAARFLFKQNXVRIICDCNAKAVRVIQSEELKQPLCLVNSTLRS 327
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPL 379
PH CHLQYM NM IASL MAVV+N + +LWGLVVCH+T+PR+VPFPL
Sbjct: 328 PHGCHLQYMXNMGCIASLAMAVVINGNDA----------TKLWGLVVCHHTSPRYVPFPL 377
Query: 380 RYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLV 439
RYACEFL Q F + + EL+L Q+ EK ILR QTLLCDML+R+APLGIVT SP+IMDL+
Sbjct: 378 RYACEFLMQAFGLQLYMELQLASQLAEKKILRMQTLLCDMLLREAPLGIVTHSPSIMDLL 437
Query: 440 KCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGD 499
KCDGAAL Y + W LGVTP + Q+ DI WL H DSTGLS DSL DAGY GA LGD
Sbjct: 438 KCDGAALYYGGRCWLLGVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADAGYPGAALLGD 497
Query: 500 VVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKT 559
VCGMA RI+ KD + WFRS TA EV+WGGAKH P++KDDG +MHPRSSFKAFLEVVK+
Sbjct: 498 AVCGMATARITSKDFLXWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFKAFLEVVKS 557
Query: 560 RSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK-SIHSKLCDLKIEGMKELEAVTSEM 618
RSLPW+ ++AIHSLQLI+R++F+D+ D K +H + D +++G+ EL +V EM
Sbjct: 558 RSLPWEVSXINAIHSLQLIMRDSFQDIE--DSSGKVMVHXQKYDSEMQGLNELXSVACEM 615
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL-TLVEDSSIDTVKRML 677
V+LIETAT PI VD G +NGWN KIAELT L +A+GK + +V + V +L
Sbjct: 616 VKLIETATAPIFGVDSSGCINGWNAKIAELTXLQAKEAMGKSLVDEIVHEDLRGAVDNLL 675
Query: 678 YLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTV 737
ALQG+E++N++ ++K G D + ++VNAC SRD +++VGVCFV QDIT +K V
Sbjct: 676 CRALQGKEDKNVELKLKNFGLNQQDSALYIVVNACXSRDYTNDIVGVCFVGQDITSEKIV 735
Query: 738 MDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAE 797
MDKF R++GDYKAIVQ NPLIPPIF SD C EWN ++ KLTG R EVI K+L E
Sbjct: 736 MDKFIRLQGDYKAIVQXLNPLIPPIFASDGNACCSEWNTSLEKLTGXMRHEVIRKMLPGE 795
Query: 798 VFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDR 857
VFG C LK+Q+ I+L +A+SGQD EK PFGFF ++GK E LL NK+ D
Sbjct: 796 VFG---GLCPLKSQDTLTRFTILLYQAISGQDTEKFPFGFFDKSGKLVEVLLTANKRTDA 852
Query: 858 EGAVTGVFCFLQLASHELQQAL-HVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKM 916
G V G FCFLQ+ + + Q L H E + K LAY +++++NPL+GI F+ K+
Sbjct: 853 NGNVIGCFCFLQIDTPDKHQGLGHGPEYRE--CFSKFKELAYIRQEMKNPLNGIRFTHKL 910
Query: 917 MEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG-YLDLEMVEFTLNEVLVASIS 975
+E T QK+ L TS C+RQ+ I+ D D+ I +G ++L + EF L VL A +S
Sbjct: 911 LETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEEGSSMELNVEEFLLGNVLDAVVS 970
Query: 976 QVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG---QLMVS 1032
QVMM K +++V E E+I + L GD I+LQQVL+DFL ++ P+ ++ +S
Sbjct: 971 QVMMLLKEKKLQLVCEIPEEIKTLPLSGDQIKLQQVLSDFLHNIVHHAPSSDGWIEIKIS 1030
Query: 1033 SSLTKDQ-LGQSVHLAY 1048
+ L Q + +HL +
Sbjct: 1031 TGLKMIQDFNEFIHLQF 1047
>gi|89331103|emb|CAJ80918.1| phytochrome A [Euphrasia stricta]
Length = 618
Score = 1045 bits (2701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/619 (80%), Positives = 555/619 (89%), Gaps = 7/619 (1%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLIIDFEPVKP+EVPMTAAGALQSYKLA+KAI+RLQSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFHEDDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QD LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VND-EEEEGDNTLPQ---KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ EE G + Q KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKEL
Sbjct: 181 VNEGNEEAGPDDSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
E E Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA LL+KN+ RLG+T
Sbjct: 241 E-ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 299
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P DFQ+ DIVSWL EYH DS GLS DSLYDAG+ GALA GDVVCGMAAVRI+ +D +FWF
Sbjct: 300 PRDFQIRDIVSWLDEYHRDSRGLSTDSLYDAGFPGALAFGDVVCGMAAVRITDRDWLFWF 359
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TASE+RWGGAKHE E+DDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLI
Sbjct: 360 RSHTASEIRWGGAKHEQGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 419
Query: 579 LRNA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
LRNA K++ DL+ I ++L +L+I+G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 420 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 479
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIKTH
Sbjct: 480 LVNGWNTKIADLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 539
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + PI+LIVNACASRD+ +NVVGVCF+AQDIT QK+VMDKFTRIEGDY+AIVQNPN
Sbjct: 540 GPNSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 599
Query: 757 PLIPPIFGSDEFGWCCEWN 775
P+IPPIFG+DEFGWC EWN
Sbjct: 600 PVIPPIFGTDEFGWCSEWN 618
>gi|89331079|emb|CAJ80906.1| phytochrome A [Conopholis alpina]
Length = 605
Score = 1044 bits (2700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/608 (80%), Positives = 548/608 (90%), Gaps = 5/608 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+L GSMERL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALRGGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV +EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVSTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HVKV+QDE LPFDLTLCGSTLRAPH CHL YMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRASHVKVVQDENLPFDLTLCGSTLRAPHRCHLLYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEG--DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
+N+ E+G ++ P KRK LWGL+VCHNT+PRFVPFPLRYACEFL QVFAIHVNKELEL
Sbjct: 181 INEGNEDGASSSSGPDKRKTLWGLLVCHNTSPRFVPFPLRYACEFLVQVFAIHVNKELEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCD+L+RDAPLGIV+QSPN+MDLVKC GA LLYKN +RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDLVKCIGAVLLYKNTKYRLGLTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD +CGMAAVRI+ +D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHWDSTGLSTDSLYDAGFPGALALGDALCGMAAVRITDRDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA+E++WGG KHEPDEKDDG KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR
Sbjct: 361 HTAAEIQWGGMKHEPDEKDDGSKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 420
Query: 581 NAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNG 640
NAFK+ DL+ IH++L +L+I G++E+EAV +EMVRLIETA+VPI AVDVDGLVNG
Sbjct: 421 NAFKESEGRDLE---IHARLNELQIGGVREIEAVATEMVRLIETASVPIFAVDVDGLVNG 477
Query: 641 WNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKI 700
WNTKIA+LTGL V+KA+G HFL LVEDSS DTV +ML LALQG+EEQN+QFEIKTHG
Sbjct: 478 WNTKIADLTGLCVNKAMGSHFLALVEDSSADTVSKMLELALQGKEEQNVQFEIKTHGQNS 537
Query: 701 NDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIP 760
PITL+VNACASRD+ +NVVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPNPLIP
Sbjct: 538 ESGPITLMVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIP 597
Query: 761 PIFGSDEF 768
PIFG+DEF
Sbjct: 598 PIFGTDEF 605
>gi|89330106|emb|CAJ80965.1| phytochrome A [Pedicularis tuberosa]
Length = 612
Score = 1044 bits (2699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/612 (79%), Positives = 553/612 (90%), Gaps = 6/612 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLI+DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS+ERL
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QD+ LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL-----PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE 397
VN+ E+G ++ P K+KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE
Sbjct: 181 VNEGNEDGPDSSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKE 240
Query: 398 LELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGV 457
+ELE Q LEKNILRTQTLLCDML+RDAPLGIV++SPN+MDLVKC+GA L++K K +RLG+
Sbjct: 241 IELENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGM 300
Query: 458 TPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFW 517
TP+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ +D +FW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDEDWLFW 360
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 578 ILRNAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
ILRNA K+ D + K IH++L DL+++G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 ILRNASNKEAEERDTNGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VDKA+G HF+ LV+DSS + V +ML LALQG EEQN+QFE KTH
Sbjct: 481 LVNGWNTKIADLTGLPVDKAMGSHFVALVDDSSAEAVNKMLELALQGNEEQNVQFEFKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + P++L+VNACASRD+ +N+VGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN
Sbjct: 541 GPRSESGPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEF 768
LIPPIFG+DEF
Sbjct: 601 QLIPPIFGTDEF 612
>gi|1172496|sp|P42499.1|PHYB_SOYBN RecName: Full=Phytochrome B
gi|516103|gb|AAA34000.1| phytochrome B [Glycine max]
Length = 1156
Score = 1043 bits (2698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/1036 (50%), Positives = 705/1036 (68%), Gaps = 47/1036 (4%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ IAQ T D +HA FE SG S F+YS S+R++S + +QQ TAYL IQ+
Sbjct: 39 SKAIAQYTEDG-VHAVFEQSGESGRSFNYSESIRIASESVPEQQ------ITAYLVKIQR 91
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH---------------- 120
G IQPFG ++A+DE +F+++ YS+NA ++L + +VPS+ D
Sbjct: 92 GGFIQPFGSMIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGPQSVPSLD 151
Query: 121 ----PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTG 176
+G+D++ +FT SA L+KA E+SL+NPI +H +TSGKPFY I+HR+
Sbjct: 152 DKNDAAFALGTDVRALFTHSSALLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDV 211
Query: 177 SLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGY 236
++ID EP + + ++ AGA+QS + +AI++LQSLPS ++ LCDT+++ V ELTGY
Sbjct: 212 GIVIDLEPARTEDPALSIAGAVQSQEALVRAISQLQSLPSADVKLLCDTVVESVRELTGY 271
Query: 237 DRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAR 296
DRVM YKFHED+HGEVVSE + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A
Sbjct: 272 DRVMVYKFHEDEHGEVVSESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHAS 331
Query: 297 HVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ 356
V+V+QDE L L L GSTL APH CH QYM NM SIASLVMAV++N +EEG +
Sbjct: 332 AVRVVQDEALVQPLCLVGSTLGAPHGCHAQYMANMGSIASLVMAVIINGNDEEGVGG--R 389
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q LEK +LRTQTLL
Sbjct: 390 SSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLL 449
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDML+RD+P GIVTQSP+IMDLVKCDGAAL ++ + LGVTP + Q+ DI+ WL +H
Sbjct: 450 CDMLLRDSPTGIVTQSPSIMDLVKCDGAALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHG 509
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL DAGY G LG G I+ KD +FWFRS TA E++WGGAK
Sbjct: 510 DSTGLSTDSLGDAGYPGLPRLGMQFVGWQVAYITEKDFLFWFRSHTAKEIKWGGAKLILR 569
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+ G++MHP SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++FKD + +
Sbjct: 570 TRMMGQRMHPLSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEHRN-SKAVV 628
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+ + +++G+ EL +V EMVRLIETAT PI AVDVDG VNGWN K++ELTGL V++A
Sbjct: 629 DPHVSEQELQGVDELSSVAREMVRLIETATAPIFAVDVDGHVNGWNAKVSELTGLPVEEA 688
Query: 657 IGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
+GK + LV S +TV ++ L +E++N++ +++T G + + L+VNAC+S+
Sbjct: 689 MGKSLVHDLVFKESEETVNKL----LSREEDKNVETKMRTFGKEHQNKAAFLVVNACSSK 744
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
+NVVGVCFV Q++T QK VM KF I+GDYKAIV +PNPLIPPIF SD+ C EWN
Sbjct: 745 HFTNNVVGVCFVGQNVTGQKIVMHKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWN 804
Query: 776 PAMVKLTGWKRE------EVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD 829
AM KL +VI K+L+ EVFG+ CC+LK ++ IVL+ A+ GQD
Sbjct: 805 TAMEKLDPSNENVTVGGVDVIGKMLVGEVFGS---CCQLKGSDSITKFMIVLHNALGGQD 861
Query: 830 PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTA 889
+K PF F R+GKY + L NK+++ EG + G FCFLQ+ S ELQQAL QR E+
Sbjct: 862 TDKFPFSFLDRHGKYVQTFLTANKRVNMEGQIIGAFCFLQIMSPELQQALKAQRQQEKEF 921
Query: 890 LKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDL 949
L R+K LAY + ++ PLSGI F+ ++E T L EQK+ L TS C++Q+ KI+ D DL
Sbjct: 922 LGRMKELAYICQGVKKPLSGIRFTNSLLEATSLTNEQKQFLETSVACEKQMLKIIRDVDL 981
Query: 950 DSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
+SI DG L+LE EF L V+ A +SQV++ + ++++ + E+I + +YGD +R+Q
Sbjct: 982 ESIEDGSLELEKGEFLLGNVINAVVSQVILLLRERNLQLIRDIPEEIKTLAVYGDQLRIQ 1041
Query: 1010 QVLADFLSISINFVPN 1025
QVL+DFL + + P+
Sbjct: 1042 QVLSDFLLNIVRYAPS 1057
>gi|89330100|emb|CAJ80962.1| phytochrome A [Pedicularis julica]
Length = 612
Score = 1043 bits (2697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/612 (79%), Positives = 552/612 (90%), Gaps = 6/612 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLI+DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS+ERL
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QD+ LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL-----PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE 397
VN+ E+G ++ P K+KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE
Sbjct: 181 VNEGNEDGPDSSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKE 240
Query: 398 LELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGV 457
+ELE Q LEKNILRTQTLLCDML+RDAPLGIV++SPN+MDLVKC+GA L++K K +RLG+
Sbjct: 241 IELENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGM 300
Query: 458 TPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFW 517
TP+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ +D +FW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDEDWLFW 360
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 578 ILRNAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
ILRNA K D + K IH++L DL+++G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 ILRNASNKQAEERDTNGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VDKA+G HF+ LV+DSS + V +ML LALQG EEQN+QFE KTH
Sbjct: 481 LVNGWNTKIADLTGLPVDKAMGSHFVALVDDSSAEAVNKMLELALQGNEEQNVQFEFKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + P++L+VNACASRD+ +N+VGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN
Sbjct: 541 GPRSESGPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEF 768
LIPPIFG+DEF
Sbjct: 601 QLIPPIFGTDEF 612
>gi|345424520|gb|AEN85364.1| phytochrome A, partial [Morisia monanthos]
Length = 593
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/597 (83%), Positives = 547/597 (91%), Gaps = 6/597 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG--DNTLPQKR 358
LQD+KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ E DN+ QKR
Sbjct: 121 LQDDKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEAAPDNSTTQKR 180
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q++EKNILRTQTLLCD
Sbjct: 181 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQVVEKNILRTQTLLCD 240
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
MLMRDAPLGIV+QSPN+MDLVKCDGAALLY++K W+LG +P++ L +I SWL E+H DS
Sbjct: 241 MLMRDAPLGIVSQSPNVMDLVKCDGAALLYRDKAWKLGTSPSESHLQEIASWLCEHHADS 300
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL+DAG+ GALALGD VCGM AVRIS +DMIFWFRS TA EVRWGGAKH+PD++
Sbjct: 301 TGLSTDSLHDAGFPGALALGDSVCGMVAVRISSEDMIFWFRSHTAGEVRWGGAKHDPDDR 360
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD G ++ IHS
Sbjct: 361 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGG----ESSIIHS 416
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
KL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+AIG
Sbjct: 417 KLNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIG 476
Query: 659 KHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLH 718
K LTLVEDSS+D VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS+DLH
Sbjct: 477 KDLLTLVEDSSVDIVKRMLENALEGTEEQNVQFEIKTHLSRTDAGPISLVVNACASKDLH 536
Query: 719 DNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DE GWC EWN
Sbjct: 537 ENVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDESGWCSEWN 593
>gi|89331137|emb|CAJ80935.1| phytochrome A [Lindenbergia philippensis]
Length = 609
Score = 1041 bits (2692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/610 (80%), Positives = 551/610 (90%), Gaps = 5/610 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSL+IDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGSLVIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DD GEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDRGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA +VKV+QD LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRAINVKVVQDGNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEG---DNTL-PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ +EE D++L P KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIH+NKE+
Sbjct: 181 VNEGDEEASTPDSSLHPDKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHINKEV 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
ELE Q+LEKNIL+TQTLLCDML+RDAPLGIV QSPNIMDLVKCDGA +LYKN+ +R G+
Sbjct: 241 ELENQMLEKNILKTQTLLCDMLLRDAPLGIVNQSPNIMDLVKCDGAMMLYKNQKYRFGLA 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
PNDFQ+ D+VSWL YH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ KD +FWF
Sbjct: 301 PNDFQIRDLVSWLDAYHGDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TA+E+RWGGAKHE EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI
Sbjct: 361 RSHTAAEIRWGGAKHERGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 420
Query: 579 LRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLV 638
LRNA ++ DL+ IH++L DL+I+G++ELE VTSEMVRLIETA+VPI AVD DGLV
Sbjct: 421 LRNASREADKKDLEGMEIHARLNDLQIDGIQELE-VTSEMVRLIETASVPIFAVDGDGLV 479
Query: 639 NGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGS 698
NGWNTKIA+L GL V+KAIG HFL LVEDSS DTV +ML LA+QG EE+N+QFEIKTHG
Sbjct: 480 NGWNTKIADLAGLPVEKAIGMHFLDLVEDSSADTVGKMLKLAIQGVEERNVQFEIKTHGP 539
Query: 699 KINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPL 758
+ + PI+L+VNACAS+D+ +NVVGVCF+AQDIT +K+VMDKFTRIEGDY+AI+QNPNPL
Sbjct: 540 RSDSTPISLVVNACASKDVKENVVGVCFIAQDITTEKSVMDKFTRIEGDYRAIIQNPNPL 599
Query: 759 IPPIFGSDEF 768
IPPIFG DEF
Sbjct: 600 IPPIFGIDEF 609
>gi|89330096|emb|CAJ80960.1| phytochrome A [Pedicularis foliosa]
Length = 611
Score = 1041 bits (2692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/611 (79%), Positives = 550/611 (90%), Gaps = 5/611 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLI+DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS+ERL
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QD+ LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL----PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ E+G ++ P K+KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE
Sbjct: 181 VNEGNEDGPDSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEF 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
ELE Q LEKNILRTQTLLCDML+RDAPLGIV++SPN+MDLVKC+GA L++K K +RLG+T
Sbjct: 241 ELENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGMT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+DFQ+ DIVSWL EYH DSTGLS DSLYDAG GALALGD VCGMAAVRI+ +D +FWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGLPGALALGDAVCGMAAVRITDEDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQL+
Sbjct: 361 RSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLV 420
Query: 579 LRNAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGL 637
LRNA K+ D + K IH+ L DL+++G++ELEAVTSEMVRLIETA+VPI AV VDGL
Sbjct: 421 LRNASNKEAEERDTNGKEIHAGLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDGL 480
Query: 638 VNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHG 697
VNGWNTKIA+LTGL VDKA+G HF+ LV+DSS + V RML LALQG EEQN+QFE KTHG
Sbjct: 481 VNGWNTKIADLTGLPVDKAMGSHFVALVDDSSAEAVNRMLELALQGNEEQNVQFEFKTHG 540
Query: 698 SKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNP 757
+ P++L+VNACASRD+ +N+VGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN
Sbjct: 541 PRSESGPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQ 600
Query: 758 LIPPIFGSDEF 768
LIPPIFG+DEF
Sbjct: 601 LIPPIFGTDEF 611
>gi|89331069|emb|CAJ80901.1| phytochrome A [Castilleja fissifolia]
Length = 609
Score = 1041 bits (2691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/609 (79%), Positives = 551/609 (90%), Gaps = 3/609 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGS+IIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LP+GSMERL
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GL+PY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
+KNKVRMI DCRA HVKV+QD+ LPFDLTLCGS RAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSNPRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ E+G ++ P K+K+LWGLVVCHNT+PRF+PFPLRYACEFLAQVF IHVNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKQLWGLVVCHNTSPRFIPFPLRYACEFLAQVFTIHVNKEIEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCDML+RDAPLGIV++SPN+MDLVKCDGA L++K K +RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSRSPNVMDLVKCDGAVLIHKTKKYRLGMTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TASE+RWGGAKHEPD+KDDGRKMHPRSSFKAFL+VVKTRSLPWKD+EMDAIHSL+LILR
Sbjct: 361 HTASEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLRLILR 420
Query: 581 NAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
N+ K+ D++ K IH++L DL+++G KELE VTSEMVRLIETA+VPI AVDVDG VN
Sbjct: 421 NSSNKEAEKRDVEGKEIHARLNDLQLDGKKELETVTSEMVRLIETASVPIFAVDVDGHVN 480
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWNTKIA+LTGL VDKAIG+HFL LVEDSS + V +ML LALQG EEQN+QFEIKTHG +
Sbjct: 481 GWNTKIADLTGLPVDKAIGRHFLALVEDSSAEAVNKMLELALQGNEEQNVQFEIKTHGPR 540
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
PI+LIVNAC SRD+ +NVVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN LI
Sbjct: 541 SESHPISLIVNACTSRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQLI 600
Query: 760 PPIFGSDEF 768
PPIFG+DEF
Sbjct: 601 PPIFGTDEF 609
>gi|345424522|gb|AEN85365.1| phytochrome A, partial [Morisia monanthos]
Length = 593
Score = 1040 bits (2690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/597 (83%), Positives = 548/597 (91%), Gaps = 6/597 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG--DNTLPQKR 358
LQD+KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ E D++ QKR
Sbjct: 121 LQDDKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEAAPDSSTTQKR 180
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q++EKNILRTQTLLCD
Sbjct: 181 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQVVEKNILRTQTLLCD 240
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
MLMRDAPLGIV+QSPN+MDLVKCDGAALLY++K W+LG +P++ L +I SWL E+H DS
Sbjct: 241 MLMRDAPLGIVSQSPNVMDLVKCDGAALLYRDKAWKLGTSPSESHLQEIASWLCEHHADS 300
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL+DAG+ GALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD++
Sbjct: 301 TGLSTDSLHDAGFPGALALGDSVCGMAAVRISSEDMIFWFRSHTAGEVRWGGAKHDPDDR 360
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD G ++ IHS
Sbjct: 361 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGG----ESSIIHS 416
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
KL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+AIG
Sbjct: 417 KLNDLKIDGVQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIG 476
Query: 659 KHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLH 718
K LTLVEDSS+D VKRML AL+G EEQN+QFEI+TH S+ + PI+L+VNACAS+DLH
Sbjct: 477 KDLLTLVEDSSVDIVKRMLENALEGTEEQNVQFEIETHLSRTDAGPISLVVNACASKDLH 536
Query: 719 DNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DE GWC EWN
Sbjct: 537 ENVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDESGWCSEWN 593
>gi|89330104|emb|CAJ80964.1| phytochrome A [Pedicularis kerneri]
Length = 612
Score = 1040 bits (2688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/612 (79%), Positives = 552/612 (90%), Gaps = 6/612 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLI+DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS+ERL
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QD+ LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL-----PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE 397
VN+ E+G ++ P K+KRLWGLVVCHNT+PRF+PFPLRYACEFLAQVFAIHVNKE
Sbjct: 181 VNEGNEDGPDSSSSSSHPDKKKRLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKE 240
Query: 398 LELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGV 457
+ELE Q LEKNILRTQTLLCDML+RDAPLGIV++SPN+MDLVKC+GA L++K K +RLG+
Sbjct: 241 IELENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGM 300
Query: 458 TPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFW 517
TP+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ +D +FW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDEDWLFW 360
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 578 ILRNAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
ILR A K+ D + K IH++L DL+++G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 ILRIASNKEAEERDTNGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VDKA+G HF+ LV+DSS + V +ML LALQG EEQN+QFE KTH
Sbjct: 481 LVNGWNTKIADLTGLPVDKAMGSHFVALVDDSSAEAVNKMLELALQGNEEQNVQFEFKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + P++L+VNACASRD+ +N+VGVCF+AQDIT QK++MDKFTRIEGDYKAIVQNPN
Sbjct: 541 GPRSESSPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYKAIVQNPN 600
Query: 757 PLIPPIFGSDEF 768
LIPPIFG+DEF
Sbjct: 601 QLIPPIFGTDEF 612
>gi|224576402|gb|ACN56894.1| phytochrome A [Smelowskia annua]
Length = 577
Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/577 (85%), Positives = 532/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GL+PYLGLHYPA DIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLDPYLGLHYPAADIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
K KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KGKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPN+MDLVKCDGAALLYK+KIW+LG TP +F L +I SWL EYHM
Sbjct: 241 CDMLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKIWKLGTTPCEFHLQEIASWLCEYHM 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IG+HFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGRHFLTLVEDSSVEVVKRMLEAALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|89331075|emb|CAJ80904.1| phytochrome A [Castilleja tenuis]
Length = 609
Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/609 (79%), Positives = 549/609 (90%), Gaps = 3/609 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGS+IIDFEP KP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPAKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVF+LTGYDRVM YKFH+DDHGEV+SEITK GL+ Y GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFDLTGYDRVMIYKFHDDDHGEVLSEITKPGLDSYAGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
+KNKVRMI DCRA HV+V+QD+ LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 IKNKVRMICDCRANHVEVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ E+G ++ P K+KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA L++K K +RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIHKTKKYRLGMTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ D+VSWL EYH DSTGLS DSLYDAG+ GAL LGD VCGMAAVRI+ D +FWFRS
Sbjct: 301 DFQIRDLVSWLDEYHRDSTGLSTDSLYDAGFPGALVLGDAVCGMAAVRITDTDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA E+RWGGAKHEPD+KDDGRKMHPRSSFKAFL+VVKTRSLPWKD+EMDAIHSLQLILR
Sbjct: 361 HTAPEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 581 NAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
N+ K+ D+D K IH++L DL+++G ELEAVTSEMVRLIETA+V I AVDVDGLVN
Sbjct: 421 NSSNKEAEKRDVDGKEIHARLNDLQLDGKGELEAVTSEMVRLIETASVQIFAVDVDGLVN 480
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWNTKIA+LTGL VDKAIG+HFL LVEDS + V +ML LALQG EEQN+QFEIKTHG +
Sbjct: 481 GWNTKIADLTGLPVDKAIGRHFLALVEDSFAEAVNKMLELALQGNEEQNVQFEIKTHGPR 540
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
+PI+LIVNACASRD+ +NVVGVCF+AQDIT Q ++MDKFTRIEGDY+AIVQNPN LI
Sbjct: 541 SESNPISLIVNACASRDVKENVVGVCFIAQDITTQISMMDKFTRIEGDYRAIVQNPNQLI 600
Query: 760 PPIFGSDEF 768
PPIFGSDEF
Sbjct: 601 PPIFGSDEF 609
>gi|89330114|emb|CAJ80969.1| phytochrome A [Rhinanthus alectorolophus]
Length = 614
Score = 1039 bits (2686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/614 (79%), Positives = 553/614 (90%), Gaps = 6/614 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLIIDFEPVKP+EVPMTAAGALQSYKLA+KAI RLQ+L GS+ERL
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAIARLQALSGGSIERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFHEDDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QDE LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VND-EEEEGDNTLPQ---KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ EE + PQ KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+
Sbjct: 181 VNEGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEI 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
E+E Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDG+ LL+KN+ +RLG+T
Sbjct: 241 EMENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGSILLHKNQKYRLGIT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGDVVCGMAAVRI+ +D +FWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TASE+RWGGAKHE E+DDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 579 LRNA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
LRNA K++ DL+ I ++L +L+I+G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIKTH
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGLHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + PI+LIVNACASRD +NVVGVCF+AQDIT QK+VMDKFTRIEGDY+AIVQNPN
Sbjct: 541 GPNSDSSPISLIVNACASRDFRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEFGW 770
P+IPPIFG+DEFGW
Sbjct: 601 PVIPPIFGTDEFGW 614
>gi|89363526|emb|CAJ80953.1| phytochrome A [Phelipanche ramosa]
Length = 608
Score = 1038 bits (2685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/608 (78%), Positives = 552/608 (90%), Gaps = 2/608 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAITRL +LP+GSM+RL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLHALPNGSMKRL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV +EITK GL P+ GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFTEITKPGLVPFAGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HVKV+QDE LPFDLTLCGSTLRAPHSCHLQYMENM+SIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVKVIQDENLPFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ +E+G ++ P KRKRLWGLVVCHNT+PRF+PFPLRYACEFLAQVFAIHVNKELEL
Sbjct: 181 VNEGDEDGPDSSSGPDKRKRLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKELEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
+ Q++EKNILRTQTLLCD+L+RDAPLGIV+ +PN+MDLVKCDGA LLY+ +RLG+TP
Sbjct: 241 DNQMVEKNILRTQTLLCDLLLRDAPLGIVSGNPNMMDLVKCDGAVLLYRITKYRLGLTPT 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH+D TGLS DSLYDAG+ GALALGD +CGMAAVRI+ KD +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHLDPTGLSTDSLYDAGFPGALALGDAICGMAAVRITDKDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA+E+RW GA+HEP EKDDGRKMHPRSSFKAFLEVVKTRSLPWK+YEMDAIHSLQLILR
Sbjct: 361 HTAAEIRWSGARHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKEYEMDAIHSLQLILR 420
Query: 581 NAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNG 640
NA K+ D++ + IH++L +L+I+G KE+E VTSEMVRLIETA+VPI AVD+DGLVNG
Sbjct: 421 NASKENKEKDMEKREIHARLNELQIDGAKEIEVVTSEMVRLIETASVPIFAVDLDGLVNG 480
Query: 641 WNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKI 700
WNTKIA+LTGL VD+AIG+HFL LVEDSS DTV +ML LALQG+EE++++FEIKTHG +
Sbjct: 481 WNTKIADLTGLGVDEAIGRHFLALVEDSSADTVNKMLELALQGKEERDVEFEIKTHGQRS 540
Query: 701 NDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIP 760
PITLIVNACASRD+++NVVGVCF+A DIT QK++MDKFTRIEGDY++I+QNPNPLIP
Sbjct: 541 ESGPITLIVNACASRDVNENVVGVCFIAHDITTQKSMMDKFTRIEGDYRSIIQNPNPLIP 600
Query: 761 PIFGSDEF 768
PIFG+DEF
Sbjct: 601 PIFGTDEF 608
>gi|224576416|gb|ACN56901.1| phytochrome A [Malcolmia africana]
Length = 577
Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/577 (85%), Positives = 531/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPN+MDLVKCDGAALLYK+K+W+LG+TP+D+QL +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKVWKLGITPSDYQLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAGY AL+LGD VCGMAAV+IS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGYPRALSLGDSVCGMAAVKISTKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD D+ TK I
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEPTDVSTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|89330102|emb|CAJ80963.1| phytochrome A [Pedicularis kansuensis]
Length = 611
Score = 1038 bits (2683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/611 (78%), Positives = 550/611 (90%), Gaps = 5/611 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLI+DFEPVKP +VPMTAAGALQSYKLAAKAITRLQ+L SGS+ERL
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPQDVPMTAAGALQSYKLAAKAITRLQALSSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QD+ LPFDLTLCGSTLRAPHSCHLQYMEN NSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENTNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL----PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
+N+ E+G ++ P K+KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+
Sbjct: 181 INEGNEDGPDSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEI 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
ELE Q LEKNILRTQTLLCD+L+RDAPLGIV++SPN+MDLVKC+GA L++K K +RLG T
Sbjct: 241 ELENQTLEKNILRTQTLLCDLLLRDAPLGIVSRSPNVMDLVKCNGAILIHKTKKYRLGTT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GAL+LGD VCGMAAVRI+ KD +FWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLGDAVCGMAAVRITDKDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TA+E+RWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLI
Sbjct: 361 RSHTAAEIRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 579 LRNAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGL 637
LRNA K+ D++ K IH++L DL+++GM+EL+AVTSEMVRLIETA+VPI AV DGL
Sbjct: 421 LRNASNKEAEASDMNGKEIHARLNDLQLDGMQELDAVTSEMVRLIETASVPIFAVGADGL 480
Query: 638 VNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHG 697
VNGWNTKIA+LTGL VD A G HF++LV+DSS + VK+ML LALQG EEQN+QFE KTHG
Sbjct: 481 VNGWNTKIADLTGLPVDTATGSHFVSLVDDSSAEAVKKMLELALQGNEEQNVQFEFKTHG 540
Query: 698 SKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNP 757
+ P++L+VNACASRD+ +N+VGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN
Sbjct: 541 PRSESGPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQ 600
Query: 758 LIPPIFGSDEF 768
LIPPIFG+DEF
Sbjct: 601 LIPPIFGTDEF 611
>gi|224576392|gb|ACN56889.1| phytochrome A [Sisymbriopsis mollipila]
Length = 578
Score = 1037 bits (2681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/578 (85%), Positives = 536/578 (92%), Gaps = 5/578 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGAL+SYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALRSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTL-P 355
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T P
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGGDAPDSTAQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QKRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIVTQSPN+MDLVKCDGAALLYK+KIW+LG+TP+D+QL +I SWL EYH
Sbjct: 241 LCDMLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKIWKLGITPSDYQLQEIASWLCEYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
D+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 DDKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKI 420
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IHSKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+
Sbjct: 421 IHSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 656 AIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
AIGKHFLTLVEDSS++ VK+ML AL+G E+QN+QFEIKTH S+ + PI+L+VNACASR
Sbjct: 481 AIGKHFLTLVEDSSVEIVKKMLENALEGTEDQNVQFEIKTHLSRADAGPISLVVNACASR 540
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
DLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 578
>gi|89330118|emb|CAJ80971.1| phytochrome A [Rhinanthus glacialis]
Length = 614
Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/614 (79%), Positives = 551/614 (89%), Gaps = 6/614 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLIIDFEPVKP+EVPMTAAGALQSYKLA+KAI RLQ+L GS+ERL
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAIARLQALSGGSIERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFHEDDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QDE LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VND-EEEEGDNTLPQ---KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ EE + PQ KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE
Sbjct: 181 VNEGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKET 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
E+E Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDG+ LL+KN+ +RLG+T
Sbjct: 241 EMENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGSILLHKNQKYRLGIT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGDVVCGMAAVRI+ +D +FWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TASE+RWGGAKHE E+DDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDA HSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDATHSLQLI 420
Query: 579 LRNA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
LRNA K++ DL+ I ++L +L+I+G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIKTH
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGLHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + PI+LIVNACASRD +NVVGVCF+AQDIT QK+VMDKFTRIEGDY+AIVQNPN
Sbjct: 541 GPNSDSSPISLIVNACASRDFRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEFGW 770
P+IPPIFG+DEFGW
Sbjct: 601 PVIPPIFGTDEFGW 614
>gi|224576242|gb|ACN56814.1| phytochrome A [Capsella bursa-pastoris]
Length = 577
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/577 (85%), Positives = 531/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L ++ SWL EY
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQELASWLCEYLT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMA VRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMATVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+LIVNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLIVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576278|gb|ACN56832.1| phytochrome A [Euclidium syriacum]
Length = 577
Score = 1035 bits (2675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/577 (84%), Positives = 532/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPM+AAGALQSYKLAAKAITRLQ LPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMSAAGALQSYKLAAKAITRLQLLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ +GD PQ
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGDGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPN+MDLVKCDGAALLYK+K+W+LG+TP+D+QL +I +WL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKVWKLGITPSDYQLQEIATWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAGY AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P+
Sbjct: 301 DSTGLSTDSLHDAGYPRALSLGDSVCGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS+D VKRML AL+G E+QN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVDIVKRMLENALEGTEDQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|89330094|emb|CAJ80959.1| phytochrome A [Pedicularis densispica]
Length = 612
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/612 (79%), Positives = 548/612 (89%), Gaps = 6/612 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAIVHRVTGSLI+DFEPVKP++VPMTAAGALQSYKLAAKAITRLQ+L SGS+ERL
Sbjct: 1 SGKPFYAIVHRVTGSLIVDFEPVKPHDVPMTAAGALQSYKLAAKAITRLQALSSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM QEVFELTGYDRVM YKFHEDDHGEV+SEITK GLEPYLGLHYPATDIPQAARFLF
Sbjct: 61 CDTMSQEVFELTGYDRVMIYKFHEDDHGEVLSEITKPGLEPYLGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QD+ L FDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLHFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL-----PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE 397
+N+ E+ + P KRKRLWGLVVCHNTTPRFVPFPLRYACEFL QVFAIHV+KE
Sbjct: 181 INEGNEDEPESSSSSSHPDKRKRLWGLVVCHNTTPRFVPFPLRYACEFLVQVFAIHVSKE 240
Query: 398 LELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGV 457
+ELE Q LEKNILRTQTLLCD+L+RDAPLGIV++SPN+MDLVKC+GA L++K K +RLG+
Sbjct: 241 IELENQTLEKNILRTQTLLCDLLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGM 300
Query: 458 TPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFW 517
TP+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ KD +FW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFW 360
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FRS TASE+RWGGAKHEPD+KDDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQL
Sbjct: 361 FRSHTASEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 578 ILRNAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
ILRNA K+ D+ K IH++L L+++GM+EL+AVTSEMVRLIETA+VPI AV DG
Sbjct: 421 ILRNASNKEAEASDVKGKEIHARLNGLQLDGMQELDAVTSEMVRLIETASVPIFAVGADG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VD+A G HF++LV+DSS++ VK+ML LALQG EEQN+QFE KTH
Sbjct: 481 LVNGWNTKIADLTGLPVDRATGSHFVSLVDDSSVEAVKKMLELALQGNEEQNVQFEFKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + P++L+VNACASRDL +N+VGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN
Sbjct: 541 GPRSESGPVSLVVNACASRDLKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEF 768
LIPPIFGSDEF
Sbjct: 601 QLIPPIFGSDEF 612
>gi|224576302|gb|ACN56844.1| phytochrome A [Hesperis sp. MAB-2008]
Length = 577
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/577 (84%), Positives = 532/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+K+W+LG TP++FQL +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFQLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 YSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFL L+EDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLALIEDSSLEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576248|gb|ACN56817.1| phytochrome A [Caulanthus crassicaulis]
Length = 576
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/576 (85%), Positives = 532/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FD TLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T+PQK
Sbjct: 121 LQDEKLSFDXTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTIPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH PD+
Sbjct: 301 STGLSTDSLLDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHNPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPW+DYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWEDYEMDAIHSLQLILRNAFKDGDTTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRDL
Sbjct: 481 GKHLLTIVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSSADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|224576268|gb|ACN56827.1| phytochrome A [Solms-laubachia linearis]
Length = 578
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/578 (85%), Positives = 533/578 (92%), Gaps = 5/578 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+ K GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVIKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTL-P 355
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T P
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGGDAPDSTAQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QKRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIVTQSPN+MDLVKCDGAALLYK+KIW+LG+TP+D+QL +I SWL EYH
Sbjct: 241 LCDMLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKIWKLGITPSDYQLQEIASWLCEYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
D+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK T D++TK
Sbjct: 361 DDKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKGGETTDVNTKI 420
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IHSKL DLKI+G++E EAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+
Sbjct: 421 IHSKLNDLKIDGLQEFEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 656 AIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
AIGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASR
Sbjct: 481 AIGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 540
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
DLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 578
>gi|6708129|gb|AAF25812.1|AF178571_1 phytochrome E [Solanum lycopersicum]
Length = 1137
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/1025 (50%), Positives = 691/1025 (67%), Gaps = 40/1025 (3%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFE---TSGTSFDYSNSVRVSSTAGGDQQPRSDR 65
S+++ K+ S +AQ DAKL A+FE SG SFDYS SV +++
Sbjct: 35 SAASNMKNNASKAALAQYNADAKLMAEFEQSSVSGKSFDYSKSVLFPPHEANEEE----- 89
Query: 66 VTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPV--- 122
T+YL IQ+G L+QPFGC++A++E TFK+I YSEN ++L G P
Sbjct: 90 -ITSYLSRIQRGGLVQPFGCMVAIEEPTFKIIGYSENCYDML----------GFKPTKMK 138
Query: 123 LG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
LG IG D + +FT S +L K + E+SLLNPI VH +T+ KPFYAI+HR+ ++ID
Sbjct: 139 LGLIGVDARNLFTPSSGDSLAKVMASREISLLNPIWVHSRTTHKPFYAILHRIDVGIVID 198
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EP + + AGA+QS KLA ++I+RLQSLP G + LCDT +++V +LTGYDRVM
Sbjct: 199 LEPANSSDPALLLAGAVQSQKLAVRSISRLQSLPGGDIGVLCDTAVEDVQKLTGYDRVMV 258
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+D+HGE+VSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A+ VKV+
Sbjct: 259 YKFHDDNHGEIVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNAQPVKVV 318
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRL 361
Q E+L + L STLR+PH CH +YM NM SI+SLVMA+++N GD+ +L
Sbjct: 319 QSEELKQPICLVNSTLRSPHECHSKYMANMGSISSLVMAILIN----SGDSM------KL 368
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGL+VCH+T+PR+VPFPLRYACEF Q F + +N EL+L Q+ EK L+ QTLLCDML+
Sbjct: 369 WGLIVCHHTSPRYVPFPLRYACEFFTQAFGLQLNMELQLASQLAEKKTLQMQTLLCDMLL 428
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RD P G+VTQSP+IMDLVKCDGAAL K W LGVTP + Q+ DI WL H DSTGL
Sbjct: 429 RDVPFGVVTQSPSIMDLVKCDGAALYCGGKCWLLGVTPTEAQVKDIAQWLLVAHKDSTGL 488
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
S D L DAGY GA LGD VCGMA RI+ KD +FWFRS TA EV+WGGAKH PD+KDDG
Sbjct: 489 STDCLADAGYPGAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKDDG 548
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLC 601
KMHPRSSF AFLEVVK+RSLPW+ E++AIHSLQ+I+R + ++ L T + S+
Sbjct: 549 GKMHPRSSFNAFLEVVKSRSLPWEIPEINAIHSLQIIMRESIQENENSSLKTLTT-SQQN 607
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
D M EL +V EMVRLIETAT PI VD GL+NGWN KIA+LTGL +A+G
Sbjct: 608 DADGPSMDELSSVAMEMVRLIETATAPIFGVDPSGLINGWNEKIADLTGLHASEAVGMSL 667
Query: 662 LT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ + + S TV+++L+ AL G+EE+N++ +++ G I L++NAC SRD +
Sbjct: 668 INDITHEDSRGTVEKVLHRALLGEEEKNVEIKLRRFGKDPPGSVIYLVINACTSRDHKNG 727
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVK 780
VVGV FVAQD+TP+K +MDKF ++ GDY+AIVQ+ +PLIPPIF SDE C EWN AM +
Sbjct: 728 VVGVSFVAQDVTPEKFIMDKFIQLRGDYEAIVQSLSPLIPPIFASDENACCSEWNAAMER 787
Query: 781 LTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFAR 840
LTGW + EV+ + L EVFG CRL Q+A I+ +A+SG D +K+PFGFF R
Sbjct: 788 LTGWTKYEVMGRTLPGEVFG---GLCRLTGQDALTKFMILFYQAISGHDTKKLPFGFFNR 844
Query: 841 NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK 900
G++ E L NK+ D G V G FCFLQ + + + + +R + +L + K Y
Sbjct: 845 RGEFLEVFLTANKRTDEHGNVCGCFCFLQPMTIDPEAS--DERQDSKDSLWKYKEYVYVL 902
Query: 901 RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLE 960
+Q++NPL+GI F+ K++E T + QK+LL TS C++Q+ ++D+ D I DG + L
Sbjct: 903 QQMKNPLNGIQFTHKLLEATGVSDNQKQLLETSEACEKQILSVIDNMDFGGIEDGKVQLN 962
Query: 961 MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI 1020
M EF L V+ A +SQVM+ K ++++++ +QI + LYGD I+LQ+VL+DFL +
Sbjct: 963 MEEFVLGNVVDAIVSQVMIFLKEKNLQLLHDIPDQIKTLPLYGDQIKLQRVLSDFLLSVV 1022
Query: 1021 NFVPN 1025
+ P+
Sbjct: 1023 HHAPS 1027
>gi|224576218|gb|ACN56802.1| phytochrome A [Aubrieta deltoidea]
Length = 577
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/577 (85%), Positives = 530/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQ LPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQFLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCH+TTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHSTTPRFVPFPLRYACEFLAQVFAIHVNKEVELESQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK KIWRLG TP++F L +I SWL +YH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKIWRLGTTPSEFHLQEIASWLCDYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 VKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHMSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+N VGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENAVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576334|gb|ACN56860.1| phytochrome A [Moriera spinosa]
Length = 576
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/575 (85%), Positives = 530/575 (92%), Gaps = 3/575 (0%)
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMA
Sbjct: 2 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 61
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YK HEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VL
Sbjct: 62 YKSHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCCAKHVRVL 121
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN---TLPQKR 358
QDEKL FD TLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN+E+ EGD T PQKR
Sbjct: 122 QDEKLSFDPTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNEEDGEGDAPDATQPQKR 181
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCD
Sbjct: 182 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCD 241
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
MLMRDAPLGIVTQSPNIMDLVKCDGAALLY +KIW+LG+TP DFQL +I SW EYHMDS
Sbjct: 242 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYSDKIWKLGITPTDFQLQEIASWSCEYHMDS 301
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+K
Sbjct: 302 TGLSTDSLHDAGFPRALALGDSVCGMAAVRISAKDMIFWFRSHTAGEVRWGGAKHDPDDK 361
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNA KD+ +++TK+IHS
Sbjct: 362 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAPKDIEATNVNTKTIHS 421
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
KL +LKI+GM+ELEAV SEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AIG
Sbjct: 422 KLNELKIDGMQELEAVASEMVRLIETATVPILAVDADGLVNGWNTKIAELTGLPVDEAIG 481
Query: 659 KHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLH 718
KH LTLVEDSS++ VKRML +AL+G EEQN+QFEIKTH S+ + P++L+VNACASRDL
Sbjct: 482 KHLLTLVEDSSVERVKRMLEMALEGTEEQNVQFEIKTHLSRADAGPLSLVVNACASRDLQ 541
Query: 719 DNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
+NVVGVCFVAQD+T QK VMDKFTRIEGDYKAI+Q
Sbjct: 542 ENVVGVCFVAQDLTGQKNVMDKFTRIEGDYKAIIQ 576
>gi|410718272|gb|AFV79512.1| phytochrome N, partial [Pinus sylvestris]
Length = 850
Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/782 (63%), Positives = 604/782 (77%), Gaps = 3/782 (0%)
Query: 273 DIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMN 332
DIPQA+RFLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM
Sbjct: 1 DIPQASRFLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMG 60
Query: 333 SIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SIASLVMAVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF
Sbjct: 61 SIASLVMAVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVF 120
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
I +NKE+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+
Sbjct: 121 GIQLNKEVELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEE 180
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
W LGVTP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+
Sbjct: 181 NFWLLGVTPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRIN 240
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
KD +FWFRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMD
Sbjct: 241 SKDFLFWFRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMD 300
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
AIHSLQLILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PIL
Sbjct: 301 AIHSLQLILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPIL 359
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AVD G+VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQ
Sbjct: 360 AVDAYGVVNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQXXX 419
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+A
Sbjct: 420 XXXXXXXXXXXXXXXVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRA 479
Query: 751 IVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKN 810
IVQNP+PLIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK
Sbjct: 480 IVQNPSPLIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKG 539
Query: 811 QEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQL 870
Q A L I+LN +M+GQ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +
Sbjct: 540 QNALTQLRIILNSSMTGQGTEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHI 599
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
AS ELQQAL+VQ + EQ A+KRLKAL Y + +I+NPL GI+F++KMME T+L +Q++L+
Sbjct: 600 ASPELQQALYVQHMLEQAAMKRLKALTYLRLEIKNPLYGIMFTQKMMERTDLREDQRQLV 659
Query: 931 HTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVN 990
TSA CQ+Q+ KILDD DL+SI DGYLDL+ VEFTL +L A ISQ M++S KG+ I
Sbjct: 660 ETSALCQKQILKILDDMDLESIEDGYLDLDTVEFTLGALLDAVISQGMIQSEEKGLEIGY 719
Query: 991 ETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLE 1050
+ +I + LYGD RLQQ+LA+FL I F P + + S TK LG V++ +E
Sbjct: 720 DLPREITTTGLYGDQSRLQQILANFLVTVIQFTPAEKWVRIKVSPTKRHLGGGVYVIRIE 779
Query: 1051 LR 1052
R
Sbjct: 780 FR 781
>gi|224576420|gb|ACN56903.1| phytochrome A [Tetracme pamirica]
Length = 577
Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/577 (84%), Positives = 530/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E +GD PQ
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEAGDGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPN+MDLVKCDGAALLYK+KIW+LG+TP+D+QL +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKIWKLGITPSDYQLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAV+IS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVKISTKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKAFLEVV TRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVXTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEG YKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGGYKAIIQ 577
>gi|89330116|emb|CAJ80970.1| phytochrome A [Rhinanthus freynii]
Length = 614
Score = 1033 bits (2670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/614 (79%), Positives = 550/614 (89%), Gaps = 6/614 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT S IIDFEPVKP+EVPMTAAGALQSYKLA+KAI R Q+L GS +RL
Sbjct: 1 SGKPFYAIIHRVTASFIIDFEPVKPHEVPMTAAGALQSYKLASKAIARSQALSGGSTQRL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFHEDDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QDE LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VND-EEEEGDNTLPQ---KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ EE + PQ KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+
Sbjct: 181 VNEGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEI 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
E+E Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDG+ LL+KN+ +RLG+T
Sbjct: 241 EMENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGSILLHKNQKYRLGIT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGDVVCGMAAVRI+ +D +FWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TASE+RWGGAKHE E+DDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 579 LRNA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
LRNA K++ DL+ I ++L +L+I+G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIKTH
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGLHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + PI+LIVNACASRD +NVVGVCF+AQDIT QK+VMDKFTRIEGDY+AIVQNPN
Sbjct: 541 GPNSDSSPISLIVNACASRDFRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEFGW 770
P+IPPIFG+DEFGW
Sbjct: 601 PVIPPIFGTDEFGW 614
>gi|224576214|gb|ACN56800.1| phytochrome A [Arabis alpina]
Length = 577
Score = 1033 bits (2670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/577 (84%), Positives = 533/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDSHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRNAFKD T D++T+ I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDGETTDVNTRII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDYDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLDNALGGTEEQNVQFEIKTHESRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|89331157|emb|CAJ80945.1| phytochrome A [Odontites himalayicus]
Length = 612
Score = 1033 bits (2670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/612 (79%), Positives = 551/612 (90%), Gaps = 6/612 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT S I+DFEPVKP+EVPMTAAGALQSYKLA+KAI+RLQ+LPSGS+ERL
Sbjct: 1 SGKPFYAIIHRVTASFIVDFEPVKPHEVPMTAAGALQSYKLASKAISRLQALPSGSIERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFHEDDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
+KNKVRMI DCRA HV+V+QDEKLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 IKNKVRMICDCRANHVRVIQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEG----DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ EE + P K+KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL
Sbjct: 181 VNEGNEEAGPDDSSQHPDKKKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
ELE Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA LL+KN +RLG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNNKYRLGIT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+DF + DIVSWL EYH DSTGLS DSLYDAG+ GALALGDVVCGMAAVRI+ +D +FWF
Sbjct: 301 PSDFPIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TASE+RWGGAKHE E+DDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHS QLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSSQLI 420
Query: 579 LRNA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
LRNA K++ DL+ I ++L +L+I+G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIKTH
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + PI+LIVNACASRD+ +NVVGVCF+AQD+T QK+VMDKFTRIEGDY+AIVQNPN
Sbjct: 541 GPNSDSSPISLIVNACASRDVRENVVGVCFIAQDMTTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEF 768
P+IPPIFG+DEF
Sbjct: 601 PVIPPIFGTDEF 612
>gi|224576380|gb|ACN56883.1| phytochrome A [Rhammatophyllum erysimoides]
Length = 578
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/578 (85%), Positives = 532/578 (92%), Gaps = 5/578 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+ K G+EPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVIKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTL-P 355
QDEKL FDLTLCGSTLRAPHSCHLQYM NM SIASLVMAVVVN+E+ EG D+T P
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMESIASLVMAVVVNEEDGEGGDAPDSTAQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QKRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIVTQSPN+MDLVKCDGAALLYK+KIW+LG+TP+D+QL DI SWL EYH
Sbjct: 241 LCDMLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKIWKLGITPSDYQLQDIASWLCEYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLQDAGFPRALSLGDSVCGMAAVRISAKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
D+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 DDKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKI 420
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IHSKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+
Sbjct: 421 IHSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 656 AIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
AIGKHFLTLVEDSS++ VKRML AL+G E+QN+QFEIKTH S+ + PI+L VNACASR
Sbjct: 481 AIGKHFLTLVEDSSVEIVKRMLENALEGTEDQNVQFEIKTHLSRADAGPISLAVNACASR 540
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
DLH++VVGVCFVA D+T QKTV+DKFTRIEGDYKAI+Q
Sbjct: 541 DLHESVVGVCFVAHDLTGQKTVVDKFTRIEGDYKAIIQ 578
>gi|345424454|gb|AEN85331.1| phytochrome A, partial [Erucastrum gallicum]
gi|345424456|gb|AEN85332.1| phytochrome A, partial [Erucastrum gallicum]
Length = 590
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/595 (84%), Positives = 545/595 (91%), Gaps = 9/595 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN EE+GD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVN--EEDGDAPDSTTHPQ 178
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 179 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 238
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG TP++F L ++ SWL E+H
Sbjct: 239 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGTTPSEFHLQELASWLCEHHS 298
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ GALAL D VCGMAAVRIS KD+IFWFRS TA EVRWGGAKH+PD
Sbjct: 299 DSTGLSTDSLHDAGFPGALALEDSVCGMAAVRISSKDIIFWFRSHTAGEVRWGGAKHDPD 358
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T++++ I
Sbjct: 359 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETINVN---I 415
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 416 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 475
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + I+L+VNACAS+D
Sbjct: 476 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHMSRTDAGLISLVVNACASKD 535
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWC 771
L ++VVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DE GWC
Sbjct: 536 LQESVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDESGWC 590
>gi|89331161|emb|CAJ80947.1| phytochrome A [Orobanche corymbosa]
Length = 608
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/608 (78%), Positives = 545/608 (89%), Gaps = 2/608 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPV P+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS++RL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVNPHEVPMTAAGALQSYKLAAKAITRLQALPSGSVKRL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV SEITK LEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMVYKFHDDDHGEVFSEITKPFLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DC A HV V+QD+ LPFDLTLCGSTLRAPHSCHLQYMEN+NSIASLVM+VV
Sbjct: 121 MKNKVRMICDCLANHVTVVQDDNLPFDLTLCGSTLRAPHSCHLQYMENINSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ +E+G ++ P KR+RLWGLVVCHNT+PRFVPFPLRYACEFLAQVFA+HV KELE
Sbjct: 181 VNEGDEDGPDSSSGPNKRERLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAVHVTKELEW 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCD+L+R+ PLGIV+ SPN+MDLVKCDGA LL+KN +RLG+TP
Sbjct: 241 ENQLLEKNILRTQTLLCDLLLRNTPLGIVSGSPNVMDLVKCDGAVLLHKNTKYRLGLTPT 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+HDIVSWL EY DSTGLS DSLYDAG+ GALALG+ VCGM A R++ KD +FWFRS
Sbjct: 301 DFQIHDIVSWLDEYRRDSTGLSTDSLYDAGFPGALALGNAVCGMTAARVTDKDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA EVRW GAKHEP EKDDGRKMHPRSSFKAFLEVVKTRSLPW+DYEMDAIHSLQLILR
Sbjct: 361 HTAGEVRWSGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWRDYEMDAIHSLQLILR 420
Query: 581 NAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNG 640
NA ++ D + + I ++L +L+I+G+KE+EAVTSEMVRLIETA+VPI AVD+DGLVNG
Sbjct: 421 NASRENDEKDSEGREIQARLNELQIDGVKEIEAVTSEMVRLIETASVPIFAVDLDGLVNG 480
Query: 641 WNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKI 700
WNTKIA+LTGL VD+AIG+HFL LVEDSS DTV +ML LALQG+EEQN+QFEIKTHG +
Sbjct: 481 WNTKIADLTGLGVDEAIGRHFLALVEDSSADTVSKMLELALQGKEEQNVQFEIKTHGQRS 540
Query: 701 NDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIP 760
PITLIVNACASRD+ +NVVGVCF+A DIT QK++MDKFTRIEGDY++I+QNPNPLIP
Sbjct: 541 ESGPITLIVNACASRDVQENVVGVCFIAHDITTQKSMMDKFTRIEGDYRSIIQNPNPLIP 600
Query: 761 PIFGSDEF 768
PIFG+DEF
Sbjct: 601 PIFGTDEF 608
>gi|224576300|gb|ACN56843.1| phytochrome A [Hesperis matronalis]
Length = 577
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/577 (84%), Positives = 531/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+K+W+LG TP++FQL +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFQLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKA LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKALLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 YSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFL L+EDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLALIEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|89330098|emb|CAJ80961.1| phytochrome A [Pedicularis gyrorhyncha]
Length = 612
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/612 (78%), Positives = 546/612 (89%), Gaps = 6/612 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAIVHRVTGSLI+DFEPVKP++VPMTAAGALQSYKLAAKAITRLQ+L SGS+ERL
Sbjct: 1 SGKPFYAIVHRVTGSLIVDFEPVKPHDVPMTAAGALQSYKLAAKAITRLQALSSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM QEVFELTGYDRVM YKFHEDDHGEV+SEITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMAQEVFELTGYDRVMIYKFHEDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QD+ L FDLTLCGSTLRAPHSCHLQYMEN NSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLHFDLTLCGSTLRAPHSCHLQYMENTNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL-----PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE 397
+N+ E+G + P K+KRLWGLVVCHNT+PRFVPFPLRYACEFL QVFAIHVNKE
Sbjct: 181 INEGNEDGPESSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLVQVFAIHVNKE 240
Query: 398 LELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGV 457
+ELE Q LEKNILRTQTLLCD+L+RDAPLGIV++SPN+MDLVKC+GA L++K K +RLG
Sbjct: 241 IELENQTLEKNILRTQTLLCDLLLRDAPLGIVSRSPNVMDLVKCNGAILIHKTKKYRLGT 300
Query: 458 TPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFW 517
TP+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ KD +FW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFW 360
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FRS TASE+RWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQL
Sbjct: 361 FRSHTASEIRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 578 ILRNAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
ILRNA K+ D++ K IH++L L+++GM+EL+AVTSEMVRLIETA+VPI AV DG
Sbjct: 421 ILRNASNKEAEASDVNGKEIHARLNVLQLDGMQELDAVTSEMVRLIETASVPIFAVGADG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VD A G HF++LV+DSS + VK+ML LALQG EEQN+QFE KTH
Sbjct: 481 LVNGWNTKIADLTGLPVDTATGSHFVSLVDDSSAEAVKKMLELALQGNEEQNVQFEFKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + P++L+VNACASRD+ +N+VGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN
Sbjct: 541 GPRSESGPVSLVVNACASRDVKENIVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEF 768
LIPPIFGSDEF
Sbjct: 601 QLIPPIFGSDEF 612
>gi|345424450|gb|AEN85329.1| phytochrome A, partial [Erucastrum cardaminoides]
Length = 593
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/593 (84%), Positives = 546/593 (92%), Gaps = 6/593 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLP GSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPRGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG--DNTL---P 355
LQD+KL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE++ D+T P
Sbjct: 121 LQDDKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDAAPDSTTTAQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QKRK+LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKRKKLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP+D+ L +I +WL +YH
Sbjct: 241 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDYHLQEIATWLCDYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL+DAG+ A ALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLHDAGFPRASALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGT-LDLDTK 594
D++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 DDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFG+DE
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDE 593
>gi|89331135|emb|CAJ80934.1| phytochrome A [Lindenbergia muraria]
Length = 611
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/611 (79%), Positives = 545/611 (89%), Gaps = 5/611 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLI+DFEPVK ++VPMTAAGALQSY+LAAKAITRLQSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKLHDVPMTAAGALQSYELAAKAITRLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM QEVFELTGYDRVM YKFH+DDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMAQEVFELTGYDRVMIYKFHDDDHGEVITEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCR+ +VKV+QD LPFDLTLCGSTLRAPHSCH QYM NM SIASLVM+VV
Sbjct: 121 MKNKVRMICDCRSNNVKVVQDGNLPFDLTLCGSTLRAPHSCHAQYMGNMTSIASLVMSVV 180
Query: 343 VNDEEEEGDNTLPQ-----KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE 397
VN+ EEE + KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIH+NKE
Sbjct: 181 VNEGEEEASSPDSSSSHPDKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHINKE 240
Query: 398 LELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGV 457
+ELE Q+LEKNILRTQTLLCDML+RDAPLG+V+QSPNIMDLVKCDGA LLYKN+ +R G+
Sbjct: 241 VELENQMLEKNILRTQTLLCDMLLRDAPLGVVSQSPNIMDLVKCDGAMLLYKNEKYRFGL 300
Query: 458 TPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFW 517
TP+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ D +FW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITGGDWLFW 360
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FRS TA+E+RWGGAKHE EKDDG KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHELGEKDDGGKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 420
Query: 578 ILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGL 637
ILRNA ++ D + + ++L DL+I+G++ELEAVTSEMVRLIETA+VPI AVD DGL
Sbjct: 421 ILRNAAREAEKKDWEGVELQARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDGDGL 480
Query: 638 VNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHG 697
VNGWNTKI++LTGL VDKAIG HFL LVEDSS DTV +ML LA+QG+EE+N+QFEIKTHG
Sbjct: 481 VNGWNTKISDLTGLPVDKAIGTHFLHLVEDSSADTVSKMLELAIQGKEERNVQFEIKTHG 540
Query: 698 SKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNP 757
K PITLIVNACAS+D+ +NVVGVCF+AQDIT +K+VMDKFTRIEGDY+AI+QNPNP
Sbjct: 541 PKSESAPITLIVNACASKDVKENVVGVCFIAQDITTEKSVMDKFTRIEGDYRAIIQNPNP 600
Query: 758 LIPPIFGSDEF 768
LIPPIFG+DEF
Sbjct: 601 LIPPIFGTDEF 611
>gi|89330120|emb|CAJ80972.1| phytochrome A [Rhinanthus minor]
Length = 612
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/612 (79%), Positives = 551/612 (90%), Gaps = 6/612 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLIIDFEPVKP+EVPMTAAGALQSYKLA+KAI RLQ+L GS+ERL
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAIARLQALSGGSIERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFHEDDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QDE LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VND-EEEEGDNTLPQ---KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ EE + PQ KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+
Sbjct: 181 VNEGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEI 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
E+E Q+LEKNILRTQTLLCDML+RDAPLG+V+QSPN+MDLVKCDG+ LL+KN+ +RLG+T
Sbjct: 241 EMENQMLEKNILRTQTLLCDMLLRDAPLGMVSQSPNVMDLVKCDGSILLHKNQKYRLGIT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGDVVCGMAAVRI+ +D +FWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TASE+RWGGAKHE E+DDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 579 LRNA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
LRNA K++ DL+ I ++L +L+I+G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIKTH
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGLHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + PI+LIVNACASRD +NVVGVCF+AQDIT QK+VMDKFTRIEGDY+AIVQNPN
Sbjct: 541 GPNSDSSPISLIVNACASRDFRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEF 768
P+IPPIFG+DEF
Sbjct: 601 PVIPPIFGTDEF 612
>gi|89330124|emb|CAJ80974.1| phytochrome A [Schwalbea americana]
Length = 612
Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/612 (79%), Positives = 542/612 (88%), Gaps = 6/612 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS+ERL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM QEVFELTGYDRVM Y+FH+DDHGEV +EITK GLEPY GLHYPATDIPQAARFLF
Sbjct: 61 CDTMAQEVFELTGYDRVMVYRFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCR HVKV+QD L FDLTLCGSTLRAPHSCH+QYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRLNHVKVVQDGNLGFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEG-----DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE 397
VN+ EEE D + KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHV+KE
Sbjct: 181 VNEGEEESSGPGLDTSQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVSKE 240
Query: 398 LELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGV 457
LELE Q+LEKNILRTQTLLCDML+RDAPLGIVTQSPN+MDLVKCDGA LL+K +RLG+
Sbjct: 241 LELENQMLEKNILRTQTLLCDMLLRDAPLGIVTQSPNVMDLVKCDGALLLHKGIKYRLGL 300
Query: 458 TPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFW 517
TP DFQL D+VSWL EYH DSTGLS+DSLYD G+ GALALGD +CGMAAVRI+ K+ +FW
Sbjct: 301 TPTDFQLRDLVSWLDEYHRDSTGLSSDSLYDGGFPGALALGDAICGMAAVRITDKEWLFW 360
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FRS TA+E+RWGGAKHE EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHESAEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 420
Query: 578 ILRN-AFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
ILRN + K+ DL + I KL +L+I+GM ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 ILRNTSLKEADDKDLGGREIQEKLGELQIDGMHELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VD+AIGKHFL LVE++S D V +ML AL+G+EEQN+ FEIKTH
Sbjct: 481 LVNGWNTKIADLTGLHVDEAIGKHFLGLVEETSADAVSKMLESALEGKEEQNVHFEIKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + PI+LIVNACASRD+ D+VVGVCF+A DIT QK+VMDKFTRIEGDY+AI+QNPN
Sbjct: 541 GLRSESGPISLIVNACASRDVKDSVVGVCFIAHDITAQKSVMDKFTRIEGDYRAIIQNPN 600
Query: 757 PLIPPIFGSDEF 768
PLIPPIFG+DEF
Sbjct: 601 PLIPPIFGTDEF 612
>gi|224576412|gb|ACN56899.1| phytochrome A [Stanleya pinnata]
Length = 576
Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/576 (84%), Positives = 531/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL E H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCENHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHNPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGDTTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEM RLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMDRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH L++VEDSS++TVKRML AL+G EEQN+QFEIKTH S + PI+L+VNAC SRDL
Sbjct: 481 GKHLLSVVEDSSVETVKRMLENALEGTEEQNVQFEIKTHLSSADAGPISLVVNACTSRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|89330152|emb|CAJ80988.1| phytochrome A [Tozzia alpina]
Length = 612
Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/612 (80%), Positives = 551/612 (90%), Gaps = 6/612 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLI+DFEPVKP+EVPMTAAGALQSYKLA+KAI+RLQSLPSGSM RL
Sbjct: 1 SGKPFYAIIHRVTASLIVDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMGRL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM QEVFELTGYDRVM YKFHEDDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMAQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QDE LP +LTLCGSTLRAPH+CHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDESLPLELTLCGSTLRAPHNCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEE---GDNTL-PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ EE GD++ P KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKEL
Sbjct: 181 VNEGNEEAGPGDSSQHPDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
ELE Q L+KNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA LL+KN+ RLG+T
Sbjct: 241 ELENQTLKKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+DF + DIVSWL EYH DSTGLS DSLYDAG+ GALALGDVVCGMAAVRI+ +D +FWF
Sbjct: 301 PSDFHIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TASE+RWGGAK+E EK DGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKNELGEKADGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 579 LRNA-FKDV-GTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
LRNA K+V G DL+ I ++L +L+I+G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 LRNASSKEVEGRKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIKTH
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELALKGKEEQNVHFEIKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + PI+LIVNAC SRD+ +NVVGVCF+AQDIT QK+VMDKFTRIEGDY+AIVQNPN
Sbjct: 541 GPNSDSSPISLIVNACTSRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEF 768
P+IPPIFG+DEF
Sbjct: 601 PIIPPIFGTDEF 612
>gi|89331081|emb|CAJ80907.1| phytochrome A [Conopholis americana]
Length = 604
Score = 1030 bits (2664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/608 (80%), Positives = 545/608 (89%), Gaps = 6/608 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+L GSMERL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALRGGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV +EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVSTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HVKV+QDE L FDLTLCGSTLRAPH CHL YMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRASHVKVVQDENLLFDLTLCGSTLRAPHRCHLLYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEG--DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
+N+ E+G ++ P KRK LWGL+VCHNT+PRFVPFPLRYACEFL QVFAIHVNKELEL
Sbjct: 181 INEGNEDGASSSSGPDKRKTLWGLLVCHNTSPRFVPFPLRYACEFLVQVFAIHVNKELEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCD+L+RDAPLGIV+QSPN+MDLVKC GA LLYKN +RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDLVKCIGAVLLYKNTKYRLGLTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD +CGMAAVRI+ +D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHWDSTGLSTDSLYDAGFPGALALGDALCGMAAVRITDRDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA+E + GG KHEPDEKDDG KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR
Sbjct: 361 HTAAETQ-GGMKHEPDEKDDGSKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 419
Query: 581 NAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNG 640
NAFK+ DL+ IH++L +L+I G++E+EAV +EMVRLIETA+VPI AVDVDGLVNG
Sbjct: 420 NAFKESEGRDLE---IHARLNELQIGGVREIEAVATEMVRLIETASVPIFAVDVDGLVNG 476
Query: 641 WNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKI 700
WNTKIA+LTGL V+KA+G HFL LVEDSS DTV +ML LALQG+EEQN+QFEIKTHG
Sbjct: 477 WNTKIADLTGLCVNKAMGSHFLALVEDSSADTVSKMLELALQGKEEQNVQFEIKTHGQNS 536
Query: 701 NDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIP 760
PITL+VNACASRD+ +NVVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPNPLIP
Sbjct: 537 ESGPITLMVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIP 596
Query: 761 PIFGSDEF 768
PIFG+DEF
Sbjct: 597 PIFGTDEF 604
>gi|224576408|gb|ACN56897.1| phytochrome A [Solms-laubachia zhongdianensis]
Length = 578
Score = 1029 bits (2661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/578 (85%), Positives = 533/578 (92%), Gaps = 5/578 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYD VM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDWVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AY+FHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYEFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTL-P 355
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T P
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGGDAPDSTAQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QK KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKGKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIVTQSPN+MDLVKCDGAALLYK+KIW+LG+TP+D+QL DI SWL EYH
Sbjct: 241 LCDMLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKIWKLGITPSDYQLQDIASWLCEYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL+DAG+ AL+LGD V GMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLHDAGFPRALSLGDSVSGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 EDKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKI 420
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IHSKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+
Sbjct: 421 IHSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 656 AIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
AIGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASR
Sbjct: 481 AIGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 540
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
DLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 578
>gi|224576330|gb|ACN56858.1| phytochrome A [Matthiola farinosa]
Length = 577
Score = 1029 bits (2661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/577 (84%), Positives = 529/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
YKFHEDDHGEVVSE+ K G+EPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 DYKFHEDDHGEVVSEVIKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+K+W+LG TP+++QL DI +WL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEYQLQDIATWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIRELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
I KH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ PI+L+VNACASRD
Sbjct: 481 IEKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRAEAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|89331045|emb|CAJ80889.1| phytochrome A [Boschniakia rossica]
Length = 592
Score = 1028 bits (2659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/609 (79%), Positives = 539/609 (88%), Gaps = 20/609 (3%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTG LIIDFEPVKP++VPMTAAGALQSYKLAAKAITRLQ+LPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGGLIIDFEPVKPHDVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV +EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HVKV+QDE LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VND-EEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELE 399
VN+ EE+G ++ P KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKELE
Sbjct: 181 VNEGNEEDGPDSSSGPDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELE 240
Query: 400 LEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTP 459
L+ Q+LEKNILRTQTLLCD+L+RDAPLGIV+QSPN+MDLVKCDGA LLYKN +RLG+TP
Sbjct: 241 LKNQMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKNTKYRLGLTP 300
Query: 460 NDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFR 519
+DFQ+ DIVSWL EYH DSTGLS DSLYDA + GA ALGD VCGMAAVRI+ D +FWFR
Sbjct: 301 SDFQVRDIVSWLDEYHRDSTGLSTDSLYDADFPGARALGDAVCGMAAVRITDSDWLFWFR 360
Query: 520 SQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 579
S TA+E+RWGG KHEP EKDDGRKMHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLIL
Sbjct: 361 SHTAAEIRWGGVKHEPGEKDDGRKMHPRSSFKAFLEVVKARSLPWKDYEMDAIHSLQLIL 420
Query: 580 RNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
RNAFK+ DL+++ IH++L +L+I+G +E+EAV SEMVRLIETA+VPI AVDVDGLVN
Sbjct: 421 RNAFKESEGRDLESREIHARLNELQIDGAREIEAVASEMVRLIETASVPIFAVDVDGLVN 480
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWNTKIA+LTGL VDKAIG HFL LVE +EEQN+QFEIKTHG
Sbjct: 481 GWNTKIADLTGLCVDKAIGSHFLALVE-----------------KEEQNVQFEIKTHGQT 523
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
PI+LIVNACASRD+ +NVVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPNPLI
Sbjct: 524 SESGPISLIVNACASRDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLI 583
Query: 760 PPIFGSDEF 768
PPIFG+DEF
Sbjct: 584 PPIFGTDEF 592
>gi|89331041|emb|CAJ80887.1| phytochrome A [Bartsia trixago]
Length = 612
Score = 1028 bits (2659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/612 (79%), Positives = 551/612 (90%), Gaps = 6/612 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLI+DFEPVKP+EVPMTAAGALQSYKLA+KAI+RLQSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTASLIVDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFH+DDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHDDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
M+NKVRMI DCRA HV+V+QD+ LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MRNKVRMICDCRANHVRVIQDQNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEG---DNTLP-QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ EE D++L KRKRLWGLVVCHNT+PR VPFPLRYACEFLAQVFAIHVNKEL
Sbjct: 181 VNEGNEEAGRDDSSLHLDKRKRLWGLVVCHNTSPRLVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
ELE Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKC+GA LLYK+K RLG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCEGAILLYKDKKHRLGIT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+DFQ+ DI+SWL EYH DSTGLS DSLYDAG+ GALALGD+VCGMAAVRI+ +D +FWF
Sbjct: 301 PSDFQIRDIISWLDEYHRDSTGLSTDSLYDAGFPGALALGDIVCGMAAVRITDRDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TASE+RWGGAKHE E+DDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 579 LRN-AFKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
LRN + K++ DL+ I ++L +L+I+G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 LRNVSSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LT L VDKAIG HFL+LVEDSS + V +ML AL G+EEQN+ FEIKTH
Sbjct: 481 LVNGWNTKIADLTALQVDKAIGVHFLSLVEDSSAEAVSKMLEQALAGKEEQNVHFEIKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + PI+LIVNACASRD+ +NVVGVCF+AQDIT QK+VMDKFTRIEGDY+AIVQNPN
Sbjct: 541 GPNSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEF 768
P+IPPIFG+DEF
Sbjct: 601 PVIPPIFGTDEF 612
>gi|89331031|emb|CAJ80882.1| phytochrome A [Aptosimum pumilum]
Length = 580
Score = 1028 bits (2659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/582 (82%), Positives = 534/582 (91%), Gaps = 2/582 (0%)
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFH+
Sbjct: 1 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMIYKFHD 60
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
DDHGEV +EITK GL+PY+GLHYPATDIPQAARFL MKNKVRMI DCRA HVKV+QDEKL
Sbjct: 61 DDHGEVFTEITKPGLDPYVGLHYPATDIPQAARFLLMKNKVRMICDCRANHVKVIQDEKL 120
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVV 366
PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VVVN+ +EEG ++ +RKRLWGLVV
Sbjct: 121 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEGSDS--SQRKRLWGLVV 178
Query: 367 CHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPL 426
CH+TTPRFVPFPLRYACEFL QVF IHVNKELELE Q+LEKNILRTQTLLCD+L+RDAPL
Sbjct: 179 CHHTTPRFVPFPLRYACEFLVQVFTIHVNKELELEKQMLEKNILRTQTLLCDLLLRDAPL 238
Query: 427 GIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSL 486
GIV+QSPN+MDLVKCDGAALLYKNK +LG+TP DFQ+ DIVSWL EYH DSTGLS DSL
Sbjct: 239 GIVSQSPNVMDLVKCDGAALLYKNKKHKLGLTPTDFQIRDIVSWLDEYHRDSTGLSTDSL 298
Query: 487 YDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHP 546
YDAG+ GALALGD VCGMAAVRI+ KD + WFRS TA+E+RWGGAKHEP EKDDGRKMHP
Sbjct: 299 YDAGFPGALALGDAVCGMAAVRITDKDWLLWFRSHTAAEIRWGGAKHEPGEKDDGRKMHP 358
Query: 547 RSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIE 606
RSSF AFLEVVKTRSLPWK YEMDAIHSLQLILRNAFK+ + DTK+IH++L DL+++
Sbjct: 359 RSSFNAFLEVVKTRSLPWKGYEMDAIHSLQLILRNAFKEADATESDTKAIHNRLNDLRMD 418
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVE 666
M+ELEAVTSEMVRLIETA+VPILAVDVDGLVNGWNTKIA+LTGL V++AIG+HFL LVE
Sbjct: 419 SMQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLGVEEAIGRHFLDLVE 478
Query: 667 DSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCF 726
DSS D VK+ML LA+QG+EEQN+QFEIKTHG+K PI+L+VNACASRD+ +NV+GVCF
Sbjct: 479 DSSADAVKKMLELAIQGKEEQNVQFEIKTHGTKSESGPISLVVNACASRDVKENVIGVCF 538
Query: 727 VAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
+AQDIT QK++MDKFTRIEGDY+AIVQNPNPLIPPIFG+DEF
Sbjct: 539 IAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEF 580
>gi|224576386|gb|ACN56886.1| phytochrome A [Romanschulzia sp. MAB-2008]
Length = 576
Score = 1028 bits (2659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/576 (84%), Positives = 531/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLG HYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGPHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL + H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCDNHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ A+ALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 STGLSTDSLHDAGFPRAVALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDN 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLLVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRDL
Sbjct: 481 GKHLLTIVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSSADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|89330090|emb|CAJ80957.1| phytochrome A [Parentucellia viscosa]
Length = 610
Score = 1028 bits (2659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/610 (79%), Positives = 554/610 (90%), Gaps = 4/610 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLI+DFEPVKP+EVPMTAAGALQSYKLA+KAI+RLQSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTASLIVDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFH+DDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHDDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
M+NKVRMI DCRA HV+V+QD+ LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MRNKVRMICDCRANHVRVIQDQNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VND-EEEEGDNTLPQK-RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ EE G + L Q ++RLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKELEL
Sbjct: 181 VNEGNEEAGPDELSQHLKRRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA LL+K++ RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKDQKHRLGITPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD+VCGMAAVRI+ +D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDIVCGMAAVRITDRDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TASE+RWGGAKHE E+DDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 581 NA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLV 638
NA K++ DL+ I ++L +L+I+G++ELEAVTSEMVRLIETA+VPILAV VDGLV
Sbjct: 421 NASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPILAVGVDGLV 480
Query: 639 NGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGS 698
NGW+TKIA+LTGL VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIK HG
Sbjct: 481 NGWDTKIADLTGLPVDKAIGVHFLSLVEESSTEAVGKMLELALEGKEEQNVHFEIKNHGP 540
Query: 699 KINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPL 758
+ PI+LIVNAC+SRD+ +NVVGVCF+AQDIT QK+VMDKFTRIEGDY+AIVQNPNP+
Sbjct: 541 NSDSSPISLIVNACSSRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPNPV 600
Query: 759 IPPIFGSDEF 768
IPPIFG+DEF
Sbjct: 601 IPPIFGTDEF 610
>gi|224576220|gb|ACN56803.1| phytochrome A [Aubrieta parviflora]
Length = 577
Score = 1028 bits (2658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/577 (84%), Positives = 527/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDR M
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AY FH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYXFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDASDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLG V+QSPNIMDLVKCDGAALLYK KIWRLG TP++F L +I SWL +YH
Sbjct: 241 CDMLMRDAPLGTVSQSPNIMDLVKCDGAALLYKEKIWRLGTTPSEFHLQEIASWLCDYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALAL D VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALEDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+V+ACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHMSRADAGPISLVVSACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NV GVC VA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVXGVCIVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576206|gb|ACN56796.1| phytochrome A [Alyssum canescens]
Length = 577
Score = 1028 bits (2657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/577 (84%), Positives = 530/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK LEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPELEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDIPDSTTQSQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIWRLG TP++F L +I SWLSEYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWRLGTTPSEFHLLEIASWLSEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAV+IS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDAVCGMAAVKISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRS FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DKDDARRMHPRSPFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAV DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVGSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVED+S++ VKRML AL+G EEQN+QFEIKTH + + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDASVEIVKRMLQNALEGTEEQNVQFEIKTHLLRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576396|gb|ACN56891.1| phytochrome A [Sisymbriopsis yechengnica]
Length = 575
Score = 1027 bits (2656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/575 (84%), Positives = 529/575 (92%), Gaps = 4/575 (0%)
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAY
Sbjct: 1 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAY 60
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V Q
Sbjct: 61 KFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVFQ 120
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN----TLPQKR 358
DEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD+ PQKR
Sbjct: 121 DEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDDPDSPAQPQKR 180
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVN+E+ELE QI+EKNILRTQTLLCD
Sbjct: 181 KRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNREVELENQIVEKNILRTQTLLCD 240
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
MLMRDAPLGIVTQSPNIMDL KCDGAALLYK+KIW+LG+TP+++QL +I SWL EYH DS
Sbjct: 241 MLMRDAPLGIVTQSPNIMDLAKCDGAALLYKDKIWKLGITPSEYQLQEIASWLCEYHTDS 300
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+K
Sbjct: 301 TGLSTDSLHDAGFPRALSLGDSVCGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDPDDK 360
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IHS
Sbjct: 361 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIHS 420
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
KL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AIG
Sbjct: 421 KLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIG 480
Query: 659 KHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLH 718
KH LTLVEDSS++ KRML AL+G EEQN+QFEIKTH S+ + PI+L VNACASRDLH
Sbjct: 481 KHLLTLVEDSSMEIAKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLAVNACASRDLH 540
Query: 719 DNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 ENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 575
>gi|224576336|gb|ACN56861.1| phytochrome A [Mostacillastrum orbignyanum]
Length = 576
Score = 1027 bits (2656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/576 (84%), Positives = 530/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGY+RVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYNRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TPN+F L +I SWL E H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPNEFHLQEIASWLCECHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+D R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIH LQLILRNAFKD T D++TK IH
Sbjct: 361 RDVARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHPLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DG VNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|224576414|gb|ACN56900.1| phytochrome A [Streptanthus squamiformis]
Length = 576
Score = 1027 bits (2655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/576 (84%), Positives = 531/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT++QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FD+TLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDITLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
R+RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RERLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+K+W+LG T ++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGTTXSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHGPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLLVDEAX 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
++NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 YENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|89330088|emb|CAJ80956.1| phytochrome A [Parentucellia latifolia]
Length = 610
Score = 1027 bits (2655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/610 (79%), Positives = 552/610 (90%), Gaps = 4/610 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLA+KAI+RLQSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFH+DDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHDDDHGEVLAEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
M+NKVRMI DCRA HV+V+QD+ LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MRNKVRMICDCRANHVRVIQDQNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEE-GDNTLPQK-RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ EE G + + Q ++RLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKELEL
Sbjct: 181 VNEGNEEVGPDEISQHLKRRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCDML+RDAPLGIV+QSP++MDLVKCDGA LL+K++ RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPDVMDLVKCDGAILLHKDQKHRLGITPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAGY GALALGD+VCGMAAVRI+ +D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGYPGALALGDIVCGMAAVRITDRDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TASE+RWGGAKHE E+DDGRKMHPRSSFKA LEVVKTRSLPWKD+EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHELGERDDGRKMHPRSSFKASLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 581 NA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLV 638
NA K++ DL+ I ++L +L I+G++ELEAVTSEMVRLIETA+VPI AV VDGLV
Sbjct: 421 NASSKEMEERKDLEGVEIQARLNELHIDGVQELEAVTSEMVRLIETASVPIFAVGVDGLV 480
Query: 639 NGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGS 698
NGWNTKIA+LT L VDKAIG HFL+LVEDSS + V +ML LAL+G+EEQN+ FEIKTHG
Sbjct: 481 NGWNTKIADLTELPVDKAIGVHFLSLVEDSSAEAVSKMLELALKGKEEQNVHFEIKTHGP 540
Query: 699 KINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPL 758
+ PI+LIVNACASRD+ +NVVGVCF+AQDIT QK+VMDKFTRIEGDY+AIVQNPNP+
Sbjct: 541 NSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPNPV 600
Query: 759 IPPIFGSDEF 768
IPPIFG+DEF
Sbjct: 601 IPPIFGTDEF 610
>gi|89330122|emb|CAJ80973.1| phytochrome A [Rhynchocorys orientalis]
Length = 612
Score = 1027 bits (2655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/612 (79%), Positives = 549/612 (89%), Gaps = 6/612 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLIIDFEPV+P+EVPMTAAGALQSYKLA+KAI RLQSLP+ S+E+L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVRPHEVPMTAAGALQSYKLASKAIARLQSLPNRSVEQL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFHEDDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QDE LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VND--EEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ +E E D T P KRKRLWGLVVCHN +PRFVPFPLRYACEFLAQVFAIHVNKEL
Sbjct: 181 VNEGNDEAEPDETSQHPDKRKRLWGLVVCHNASPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
E E Q+LEKNILRTQTLLCDML+RDAPLGIV+Q+PN+MDLVKCDGA LL+KN+ RLG+T
Sbjct: 241 ESENQMLEKNILRTQTLLCDMLLRDAPLGIVSQNPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGDVVCGMAAVRI+ +D +FWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TASE+RWGGAKHE +KDDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGQKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 579 LRNA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
LRNA K++ DL+ I ++L +L+I+G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIAELTGL VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIKTH
Sbjct: 481 LVNGWNTKIAELTGLPVDKAIGMHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
+ PI+LIVNAC+SRD+ +NVVGVCF+AQDIT QK VMDKFTRIEGDY+AIVQNPN
Sbjct: 541 SPNSDSSPISLIVNACSSRDVRENVVGVCFIAQDITTQKNVMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEF 768
P+IPPIFG+DEF
Sbjct: 601 PVIPPIFGTDEF 612
>gi|224576366|gb|ACN56876.1| phytochrome A [Pennellia brachycarpa]
Length = 577
Score = 1026 bits (2654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/577 (84%), Positives = 529/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
+YKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIP AARFLFM NKVRMIVDC A+H +V
Sbjct: 61 SYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPXAARFLFMXNKVRMIVDCDAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPH+CHLQYM NM+SIASLVMAVVVN+E+ +GD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHNCHLQYMANMDSIASLVMAVVVNEEDGDGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
+STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 ESTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD +MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDAGRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLK +G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKTDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS+D VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVDIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|345424460|gb|AEN85334.1| phytochrome A, partial [Erucastrum virgatum]
Length = 582
Score = 1026 bits (2653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/582 (85%), Positives = 536/582 (92%), Gaps = 4/582 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSL SGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLSSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTLPQ 356
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQ
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGADAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+ + L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSGYHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D+ TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVHTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDGA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ N PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRANAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPL 758
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQNPNPL
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQNPNPL 582
>gi|224576262|gb|ACN56824.1| phytochrome A [Cremolobus subscandens]
Length = 577
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/577 (84%), Positives = 528/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKA+TRLQSLPSGSMERLCDTM+QEVFELTG+DRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAVTRLQSLPSGSMERLCDTMVQEVFELTGFDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN----TLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDTPESTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWILGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPG 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEITDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGK L+LVED S++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKRLLSLVEDCSVEAVKRMLQNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576394|gb|ACN56890.1| phytochrome A [Sisymbriopsis yechengnica]
Length = 578
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/578 (84%), Positives = 533/578 (92%), Gaps = 5/578 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEV ELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVSELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTL-P 355
+QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIAS VMAVVVN+E+ EG D+T P
Sbjct: 121 IQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASPVMAVVVNEEDGEGGDAPDSTAQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QKRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIVTQSPN+MDLVK DGAALLYK+KIW+LG+TP+D+QL +I SWL EYH
Sbjct: 241 LCDMLMRDAPLGIVTQSPNVMDLVKWDGAALLYKDKIWKLGITPSDYQLQEIASWLCEYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
D+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 DDKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKI 420
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IHSKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+
Sbjct: 421 IHSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 656 AIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
AIGKHFLTLVEDSS++ VK+ML AL+G E+QN+QFEIKTH S+ + PI+L+VNACASR
Sbjct: 481 AIGKHFLTLVEDSSVEIVKKMLENALEGTEDQNVQFEIKTHLSRADAGPISLVVNACASR 540
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
DLH+NVVGVCFVA +T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 DLHENVVGVCFVAHGLTGQKTVMDKFTRIEGDYKAIIQ 578
>gi|89330076|emb|CAJ80949.1| phytochrome A [Orobanche fasciculata]
Length = 611
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/610 (77%), Positives = 545/610 (89%), Gaps = 2/610 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS++RL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSVKRL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFH+DDHGEV +EITK GL+PY+GLHYPATDIPQAARFLF
Sbjct: 61 CNTMVQEVFELTGYDRVMVYKFHDDDHGEVFAEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DC+A HVKV+QD+ LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCKAYHVKVVQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VN--DEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN DE+ ++ P KRKRLWGLVVCHNT+PRFVPFPLR+ACEFL QVFA+HV KE EL
Sbjct: 181 VNEGDEDVPDSSSGPDKRKRLWGLVVCHNTSPRFVPFPLRHACEFLTQVFAVHVTKEWEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCD+L+RD+PLGI++ SPN+MDLV+CDGA LL+KN I+RLG TP
Sbjct: 241 ENQLLEKNILRTQTLLCDLLLRDSPLGIISGSPNVMDLVRCDGAVLLHKNTIYRLGQTPT 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
D Q+ DIVSWL EYH DSTGLS DSLYDAG+ GALALG+ VCGM A +++ KD IFWFRS
Sbjct: 301 DLQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGNAVCGMTAAKVTDKDWIFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA+EV W GAKHEP EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR
Sbjct: 361 HTAAEVHWSGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 420
Query: 581 NAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNG 640
NA + + + H++L +L++ G+KE+EAVTSEMVRLIETA+VPI AVD+DGLVNG
Sbjct: 421 NASIENVEKESEGGETHARLNELQLNGVKEIEAVTSEMVRLIETASVPIFAVDLDGLVNG 480
Query: 641 WNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKI 700
WNTKIA+LTGL V++AIG+HFL LVEDSS DTV +ML LA+QG+EEQN+QFEIKTHG +
Sbjct: 481 WNTKIADLTGLGVNEAIGRHFLALVEDSSADTVSKMLDLAMQGKEEQNVQFEIKTHGRRS 540
Query: 701 NDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIP 760
PITLIVNACASRD+ +NVVGVCF+A DIT QK++MDKFTRIEGDY++I+Q+PNPLIP
Sbjct: 541 ESGPITLIVNACASRDVQENVVGVCFIAHDITTQKSMMDKFTRIEGDYRSIIQSPNPLIP 600
Query: 761 PIFGSDEFGW 770
PIFG+DE+GW
Sbjct: 601 PIFGTDEYGW 610
>gi|224576238|gb|ACN56812.1| phytochrome A [Cakile maritima]
Length = 576
Score = 1025 bits (2651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/576 (84%), Positives = 529/576 (91%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRV
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVK 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGI++QSPNIMDLVKCDGAALLYK K+W+LG+TP+DF L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKEKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +D IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDTIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DL+I+G++ELEAVT EMVRLIETATVPILAVD DGL+NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLQIDGIQELEAVTGEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLRVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVM KFTRIEGDYKAIVQ
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMVKFTRIEGDYKAIVQ 576
>gi|345424382|gb|AEN85295.1| phytochrome A, partial [Erucaria cakiloidea]
gi|345424386|gb|AEN85297.1| phytochrome A, partial [Erucaria cakiloidea]
Length = 587
Score = 1025 bits (2650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/595 (83%), Positives = 538/595 (90%), Gaps = 8/595 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ E D T PQKRKR
Sbjct: 121 LQDEKLAFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDATTPQKRKR 180
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDML
Sbjct: 181 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+WRLG T + +I SWL EYH DSTG
Sbjct: 241 MRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWRLGTT---LHIQEIASWLCEYHTDSTG 297
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD++DD
Sbjct: 298 LSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDDRDD 357
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD D++T I+SKL
Sbjct: 358 ARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGEAADVNTNIIYSKL 417
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNG ELT L VD+AIGKH
Sbjct: 418 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNG-----VELTDLPVDEAIGKH 472
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
LTLVE SS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS+DLH+N
Sbjct: 473 LLTLVEVSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASKDLHEN 532
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
VVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 533 VVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 587
>gi|224576288|gb|ACN56837.1| phytochrome A [Fibigia suffruticosa]
Length = 577
Score = 1025 bits (2649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/577 (84%), Positives = 530/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYE+PMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEIPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL +LTLCGSTLRAP+SCHLQYM NM+SIASLV+AVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSSELTLCGSTLRAPYSCHLQYMANMDSIASLVIAVVVNEEDGEGDAPDATTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TP++F ++ SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGATPSEFHPQELASWLREYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHYPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLK++G++ELEAVTSEMVRLIETATVPILAVD DG VNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLXDLKLDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576364|gb|ACN56875.1| phytochrome A [Sterigmostemum violaceum]
Length = 577
Score = 1024 bits (2648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/577 (84%), Positives = 530/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT++QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC ARHV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNARHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 FQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELESQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDA LGIVTQSPNIMDLVKCDGAALLYK+K+W+LG+TP+++QL DI SWL EYH
Sbjct: 241 CDMLMRDASLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGITPSEYQLQDIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+ GD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALSPGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF+D D++TK I
Sbjct: 361 DRDDPRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGEPTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGLQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576202|gb|ACN56794.1| phytochrome A [Aethionema saxatile]
Length = 570
Score = 1024 bits (2648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/570 (84%), Positives = 529/570 (92%), Gaps = 3/570 (0%)
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
PYEVPMTA GALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHE
Sbjct: 1 PYEVPMTATGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHE 60
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
DDHGEVVSE+ K GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VLQDEKL
Sbjct: 61 DDHGEVVSEVAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCCAKHVRVLQDEKL 120
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN---TLPQKRKRLWG 363
FDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN+E+ EGD T PQKRKRLWG
Sbjct: 121 SFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNEEDGEGDAPDPTQPQKRKRLWG 180
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+EL+ QI+EKNILRTQTLLCDMLMRD
Sbjct: 181 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDSQIVEKNILRTQTLLCDMLMRD 240
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
APLGIVTQSPNIMDLVKCDGAALLY +KIW+LG+TP DFQL +I SWL EYHMDSTGLS
Sbjct: 241 APLGIVTQSPNIMDLVKCDGAALLYNDKIWKLGITPTDFQLQEIASWLCEYHMDSTGLST 300
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P++KDD R+
Sbjct: 301 DSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPEDKDDARR 360
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDL 603
+HPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNA KD+ +++TK+IHSKL DL
Sbjct: 361 LHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAPKDIEATNVNTKTIHSKLNDL 420
Query: 604 KIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT 663
+++G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AIGKHFL+
Sbjct: 421 RLDGIQELEAVTSEMVRLIETATVPILAVDADGLVNGWNTKIAELTGLPVDEAIGKHFLS 480
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LVEDSS++ VKRML +AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL++NVVG
Sbjct: 481 LVEDSSVERVKRMLEMALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLNENVVG 540
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
VCFVAQD+T QK VMDKFTRIEGDYKAI+Q
Sbjct: 541 VCFVAQDLTGQKNVMDKFTRIEGDYKAIIQ 570
>gi|89330084|emb|CAJ80954.1| phytochrome A [Orthocarpus bracteosus]
Length = 609
Score = 1023 bits (2646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/609 (79%), Positives = 544/609 (89%), Gaps = 3/609 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGS+IIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+L SGSME+L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALSSGSMEQL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C M+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GL+PY+GLHYPATDIPQAARFLF
Sbjct: 61 CGMMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
+KNKVRMI DCRA HVKV+QD+ LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEG--DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ E+G ++ P ++KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDEKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
+ Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA L+YK K +RLG TP+
Sbjct: 241 KNQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGKTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITNTDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA+E+RWGGAKHE EKDDGRKMHPR SFKAFLEVVKTRSLPWKD+EMDAIHSLQLILR
Sbjct: 361 HTAAEIRWGGAKHELGEKDDGRKMHPRLSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 581 NAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
NA K D++ K IH++L DL+++G++ELEAVTSEMVRLIETA+V I AVDVDGLVN
Sbjct: 421 NASNKKAEERDVEGKEIHARLNDLQLDGVQELEAVTSEMVRLIETASVSIFAVDVDGLVN 480
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWNTKIA+LTGL VDKAIGKHFL LVEDSS + V +ML LALQG EEQN+ FEIKTH +
Sbjct: 481 GWNTKIADLTGLPVDKAIGKHFLALVEDSSAEVVNKMLELALQGNEEQNVLFEIKTHDLR 540
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
PI+LIVNACAS D+ NVVGVCFVAQDIT QK++M KFTRIEGDY+AIVQNPN LI
Sbjct: 541 SESGPISLIVNACASWDVKGNVVGVCFVAQDITIQKSMMGKFTRIEGDYRAIVQNPNQLI 600
Query: 760 PPIFGSDEF 768
PPIFG+DEF
Sbjct: 601 PPIFGTDEF 609
>gi|224576256|gb|ACN56821.1| phytochrome A [Christolea crassifolia]
Length = 578
Score = 1023 bits (2645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/578 (84%), Positives = 530/578 (91%), Gaps = 5/578 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAIT LQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITMLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFL MKNKVRMIV C A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLLMKNKVRMIVGCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTL-P 355
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D T P
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGGDAPDTTAQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QKRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALL+K+KIW+LG+TP+++QL +I SW EYH
Sbjct: 241 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLHKDKIWKLGITPSEYQLQEIASWFCEYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS 595
++KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 EDKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKI 420
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IHSKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+
Sbjct: 421 IHSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 656 AIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
AIGKHFLTLVEDSS++ VKRML AL+G E+QN+ FEIKTH S+ + PI+L+VNACASR
Sbjct: 481 AIGKHFLTLVEDSSVELVKRMLENALEGTEDQNVLFEIKTHLSRADAGPISLVVNACASR 540
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
DLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 578
>gi|224576332|gb|ACN56859.1| phytochrome A [Matthiola integrifolia]
Length = 577
Score = 1023 bits (2644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/577 (84%), Positives = 528/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSL SGSMERLCDTM+QEVFELTGYDR M
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLSSGSMERLCDTMVQEVFELTGYDREM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMHSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+K+W+L +TP+++QL +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLDITPSEYQLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++T I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTNII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH L LVEDSS++ VKRML AL+G EEQN+QFEIK H S+ + PI+LIVNACASRD
Sbjct: 481 IGKHLLILVEDSSVEIVKRMLENALEGTEEQNVQFEIKRHLSRADAGPISLIVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576216|gb|ACN56801.1| phytochrome A [Asta schaffneri]
Length = 577
Score = 1022 bits (2643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/577 (84%), Positives = 529/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFEL+GYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELSGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKF++DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFM+NKVRMIVDC A+HV+V
Sbjct: 61 AYKFYDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMENKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN----TLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD+ T Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDSADATTQSQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LGVTP++F L +I WLSEYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGVTPSEFHLQEIALWLSEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG ALALGD VCGMAAVRIS KD+IFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGLPRALALGDSVCGMAAVRISSKDLIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD D++TK I
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGENTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DG VNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH L+ VEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLSPVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
L +NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQ
Sbjct: 541 LQENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQ 577
>gi|224576286|gb|ACN56836.1| phytochrome A [Farsetia aegyptia]
Length = 577
Score = 1022 bits (2643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/577 (84%), Positives = 529/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN----TLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEGEGDAPDSATQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSP+IMDLVKCDGAALLYK+KIWRLG+TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPSIMDLVKCDGAALLYKDKIWRLGITPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+ DD R+MHPRSSFKAFLEVVK RSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DIDDARRMHPRSSFKAFLEVVKMRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH L+LVEDSS++ VK ML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLSLVEDSSVEIVKGMLEKALEGIEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
L +NVVGVCFVA +T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LQENVVGVCFVAHGLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|345424388|gb|AEN85298.1| phytochrome A, partial [Erucaria cakiloidea]
Length = 587
Score = 1022 bits (2643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/595 (83%), Positives = 537/595 (90%), Gaps = 8/595 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ E D T PQKRKR
Sbjct: 121 LQDEKLAFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDATTPQKRKR 180
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDML
Sbjct: 181 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+WRLG T + +I SWL EYH DSTG
Sbjct: 241 MRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWRLGTT---LHIQEIASWLCEYHTDSTG 297
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD++DD
Sbjct: 298 LSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDDRDD 357
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD D++T I+SKL
Sbjct: 358 ARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGEAADVNTNIIYSKL 417
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNG ELT L V +AIGKH
Sbjct: 418 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNG-----VELTDLPVGEAIGKH 472
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
LTLVE SS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS+DLH+N
Sbjct: 473 LLTLVEVSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASKDLHEN 532
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
VVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 533 VVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 587
>gi|224576426|gb|ACN56906.1| phytochrome A [Thlaspi arvense]
Length = 577
Score = 1022 bits (2643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/577 (85%), Positives = 533/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP+DF L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSDFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSMEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576274|gb|ACN56830.1| phytochrome A [Dontostemon senilis]
Length = 578
Score = 1021 bits (2641), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/578 (83%), Positives = 533/578 (92%), Gaps = 5/578 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AY+FH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYRFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV QSPNIMDLVKCDGAALLYK+K+W+LG+TP+++QL +I +WLSEYH
Sbjct: 241 CDMLMRDAPLGIVAQSPNIMDLVKCDGAALLYKDKVWKLGITPSEYQLQEIATWLSEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAV+I+ KDMIFWFRS TA EVRWGGAKH+P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVKITSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDL-DTKS 595
++DD R+MHPRSSFKAFLEVVK+RS+PWK+YEMDAIHSLQLILRNAFKD T D+ +T
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKSRSMPWKEYEMDAIHSLQLILRNAFKDGETTDVNNTNI 420
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
I+SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+
Sbjct: 421 IYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 656 AIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASR
Sbjct: 481 AIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASR 540
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
DLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 578
>gi|224576224|gb|ACN56805.1| phytochrome A [Barbarea vulgaris]
Length = 577
Score = 1021 bits (2641), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/577 (85%), Positives = 532/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAK ITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKVITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP+DF L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSDFHLQEIASWLYEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPKALSLGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ V+RML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVRRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|345424384|gb|AEN85296.1| phytochrome A, partial [Erucaria cakiloidea]
Length = 587
Score = 1020 bits (2637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/595 (83%), Positives = 536/595 (90%), Gaps = 8/595 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQ EKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ E D T PQKRKR
Sbjct: 121 LQXEKLAFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDATTPQKRKR 180
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDML
Sbjct: 181 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+WRLG T + +I SWL EYH DSTG
Sbjct: 241 MRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWRLGTT---LHIQEIASWLCEYHTDSTG 297
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD++DD
Sbjct: 298 LSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDDRDD 357
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
R+MHPR SFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD D++T I+SKL
Sbjct: 358 ARRMHPRLSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGEAADVNTNIIYSKL 417
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNG ELT L VD+AIGKH
Sbjct: 418 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNG-----VELTDLPVDEAIGKH 472
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
LTLVE SS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS+DLH+N
Sbjct: 473 LLTLVEVSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASKDLHEN 532
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
VVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWN
Sbjct: 533 VVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCSEWN 587
>gi|224576388|gb|ACN56887.1| phytochrome A [Schizopetalon rupestre]
Length = 577
Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/577 (84%), Positives = 527/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+ EVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVHEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVS +TK GLEPYLGLHYPATD+PQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHDDDHGEVVSGVTKPGLEPYLGLHYPATDVPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLV+A+VVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVIAIVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHN TPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNLTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK++IW+LG+TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDQIWKLGITPSEFHLEEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPG 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IG H L+LVEDSS++ VKRML AL+G EEQNIQFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGNHLLSLVEDSSVEIVKRMLENALEGTEEQNIQFEIKTHRSRDDAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQ
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQ 577
>gi|224576318|gb|ACN56852.1| phytochrome A [Isatis tinctoria]
Length = 576
Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/576 (85%), Positives = 534/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN---TLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T+PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATIPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEATDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|224576306|gb|ACN56846.1| phytochrome A [Hirschfeldia incana]
Length = 574
Score = 1019 bits (2635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/574 (83%), Positives = 527/574 (91%), Gaps = 1/574 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYK AAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKPAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQD+KL FDLTLCGS+LRAPH+CHLQYM NM+SIASLVMAVVVN+E+ D QKRKR
Sbjct: 121 LQDDKLSFDLTLCGSSLRAPHTCHLQYMANMDSIASLVMAVVVNEEDGGEDAETAQKRKR 180
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDML
Sbjct: 181 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSP+IMDLVKCDGAALLYK ++W+LG TP++F L +I SWL EYH DSTG
Sbjct: 241 MRDAPLGIVSQSPDIMDLVKCDGAALLYKERVWKLGTTPSEFHLQEIASWLCEYHADSTG 300
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD +DD
Sbjct: 301 LSTDSLHDAGFPSALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDNRDD 360
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVG-TLDLDTKSIHSK 599
R+MHPRSSFKAFLEVVKTRSLPW+DYEMDAIHSLQLILRNAFKD G T DL+T +IHSK
Sbjct: 361 ARRMHPRSSFKAFLEVVKTRSLPWRDYEMDAIHSLQLILRNAFKDGGETTDLNTNAIHSK 420
Query: 600 LCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGK 659
L DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL++D+AIGK
Sbjct: 421 LNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLTIDEAIGK 480
Query: 660 HFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHD 719
H LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + I+L+VNACASRDLH+
Sbjct: 481 HLLTLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGQISLVVNACASRDLHE 540
Query: 720 NVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
+VVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQ
Sbjct: 541 SVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQ 574
>gi|224576320|gb|ACN56853.1| phytochrome A [Leiospora eriocalyx]
Length = 577
Score = 1019 bits (2635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/577 (85%), Positives = 532/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL FDLTLCGSTLRAPHSCHLQYM NM SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMESIASLVMAVVVNEEDGEGDAPDSTAPPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKR WGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRPWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELESQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+KIW+LG+TP++FQL +I SWL EYHM
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKIWQLGITPSEFQLQEIASWLCEYHM 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHPSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQ
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQ 577
>gi|224576326|gb|ACN56856.1| phytochrome A [Lunaria annua]
Length = 577
Score = 1019 bits (2634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/577 (83%), Positives = 526/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQ YKLAA+AITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQLYKLAARAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAV+VN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVIVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELEYQI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELEYQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG+TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGITPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMA RIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAGARISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++ D R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR+AFKD D +TK I
Sbjct: 361 DRGDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRDAFKDGEATDANTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLK++G++ELEAVTS MVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKLDGIQELEAVTSGMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IG H LTLVEDSS++ VKRML AL+G EEQ++QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGNHLLTLVEDSSVEIVKRMLENALEGTEEQSVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576236|gb|ACN56811.1| phytochrome A [Bunias orientalis]
Length = 577
Score = 1019 bits (2634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/577 (84%), Positives = 523/577 (90%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQA RFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAVRFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+KIW+LG TP+ FQL +I S L EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKIWKLGTTPSVFQLQEIASXLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHNPE 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEATDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HS DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSNANDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LT+VEDSS++ VKRML AL+G EEQN+QFEIKTH S+ PI+L+VNACASRD
Sbjct: 481 IGKHLLTIVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRAEAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEG YKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGXYKAIIQ 577
>gi|224576422|gb|ACN56904.1| phytochrome A [Thelypodium laciniatum]
Length = 576
Score = 1019 bits (2634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/576 (85%), Positives = 535/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT++QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTIVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEV SE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVASEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T+PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPGSTIPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDTVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTIVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|224576410|gb|ACN56898.1| phytochrome A [Stanleya pinnata]
Length = 576
Score = 1018 bits (2632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/576 (85%), Positives = 533/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FD+TLCGSTLRAPHSCHLQYM NM+SIASLVMA+VVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDITLCGSTLRAPHSCHLQYMANMDSIASLVMAIVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+K+W+LG TPN+F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGTTPNEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLLVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVC VA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCLVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|89330074|emb|CAJ80948.1| phytochrome A [Orobanche densiflora]
Length = 608
Score = 1018 bits (2631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/608 (77%), Positives = 543/608 (89%), Gaps = 2/608 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAI LQ+LP GSMERL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAIACLQALPGGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+Q+VFELTGYDRVM YKFHEDDHGEV +EITK GLEPY+GLHYPATDI QAARFLF
Sbjct: 61 CDTMVQQVFELTGYDRVMIYKFHEDDHGEVFTEITKPGLEPYVGLHYPATDISQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HVKV+QD+ LPFDL LCGSTLRAPH CHLQYMENMN IASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVKVVQDDNLPFDLALCGSTLRAPHGCHLQYMENMNPIASLVMSVV 180
Query: 343 VNDEEEEGDNTLPQ--KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
V++ +E+G N+ KRKRLWGLVVCHNT PRF+PFPLRYACEFL QVF+IHVNKELEL
Sbjct: 181 VSEGDEDGPNSSSSLDKRKRLWGLVVCHNTCPRFIPFPLRYACEFLVQVFSIHVNKELEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
+ Q+LEKNIL TQTLLCD+L+RD PLGIV+QSPN+MDLVKCDGA LL+K +RLG+TP
Sbjct: 241 KNQMLEKNILHTQTLLCDLLLRDVPLGIVSQSPNVMDLVKCDGAILLHKRTKYRLGLTPT 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALG +CGMAAV+I+ +D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHQDSTGLSTDSLYDAGFPGALALGHALCGMAAVKITDEDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA+E+RWGGAKHE EKDDG+KMHPRSSF+AFLEVVKTRSLPWKDYEMD IHSLQLILR
Sbjct: 361 HTAAEIRWGGAKHELGEKDDGKKMHPRSSFRAFLEVVKTRSLPWKDYEMDGIHSLQLILR 420
Query: 581 NAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNG 640
NA+K+ DL+++ IH++L +L+I G+KE+EAVTSEMVRLIETAT PI +V +DGLVNG
Sbjct: 421 NAYKESEEKDLESREIHARLNELQIGGVKEIEAVTSEMVRLIETATAPIFSVGLDGLVNG 480
Query: 641 WNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKI 700
WNTKI++LTGL+VD+AIG HFL LVEDSS DTV +ML LALQG+EE ++QFE+KTHG +
Sbjct: 481 WNTKISDLTGLNVDEAIGMHFLALVEDSSADTVSKMLGLALQGKEEHDVQFEVKTHGQRR 540
Query: 701 NDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIP 760
PI+LIVNACASRD+++NVVGVCF+AQDIT QK++MDKFTRIEGDY++I+QNPNPLIP
Sbjct: 541 ESGPISLIVNACASRDVNENVVGVCFIAQDITTQKSMMDKFTRIEGDYQSIIQNPNPLIP 600
Query: 761 PIFGSDEF 768
PIFG+DEF
Sbjct: 601 PIFGTDEF 608
>gi|224576404|gb|ACN56895.1| phytochrome A [Smelowskia calycina]
Length = 577
Score = 1017 bits (2630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/577 (84%), Positives = 533/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKP+EVPMTAAGALQSY LAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPHEVPMTAAGALQSYTLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYHM
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHM 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KD+IFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDLIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IG+H LTL+EDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGRHLLTLIEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576424|gb|ACN56905.1| phytochrome A [Thelypodium laciniatum]
Length = 576
Score = 1017 bits (2629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/576 (85%), Positives = 532/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLA KAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAEKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGS+LRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSSLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TPN+F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPNEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRDL
Sbjct: 481 GKHLLTIVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSSADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|224576308|gb|ACN56847.1| phytochrome A [Hymenolobus procumbens]
Length = 577
Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/577 (84%), Positives = 532/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+WRLG TP++F L ++ SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWRLGTTPSEFHLQELASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LG VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGGSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLESALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T +KTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGEKTVMDKFTRIEGDYKAIIQ 577
>gi|224576354|gb|ACN56870.1| phytochrome A [Nevada holmgrenii]
Length = 577
Score = 1016 bits (2627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/577 (85%), Positives = 532/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGI++QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGILSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QF+IKTH + + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFDIKTHLPRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|89331035|emb|CAJ80884.1| phytochrome A [Bartsia crenata]
Length = 610
Score = 1016 bits (2627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/610 (78%), Positives = 547/610 (89%), Gaps = 4/610 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLI+DFEPVKP+EVPMTA GALQSYKLA+KA +RLQSLPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTASLIVDFEPVKPHEVPMTATGALQSYKLASKATSRLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFH+DDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHDDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
M+NKVRMI DCRA HV+V+QD+ LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MRNKVRMICDCRANHVRVIQDQNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEE-GDNTLPQK-RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ EE G + L Q ++RLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKELEL
Sbjct: 181 VNEGNEEVGPDELSQHLKRRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTL+CDML+RDAPLGIV+QSPN+MDLVKCDGA LL+K++ RLGVTP+
Sbjct: 241 ENQMLEKNILRTQTLMCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKDQKHRLGVTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAGY GA ALGD+VCGMAAVRI+ +D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGYPGAHALGDIVCGMAAVRITDRDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TASE+RWGGAKHE E+D G+KMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHELGERDGGQKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 581 NA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLV 638
NA K++ DL+ I ++L +L I+G++ELEAVTSEMVRLIETA+VPI AV VDGLV
Sbjct: 421 NASSKEMEERKDLEGVEIQARLNELHIDGVQELEAVTSEMVRLIETASVPIFAVGVDGLV 480
Query: 639 NGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGS 698
NGWNTKIA+LT L VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEI+THG
Sbjct: 481 NGWNTKIADLTELPVDKAIGVHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIETHGP 540
Query: 699 KINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPL 758
+ PI+LIVNACASRD+ +NVVGVCF+AQDIT QK VMDKFTRIEGDY+AIVQNPNP+
Sbjct: 541 NSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKRVMDKFTRIEGDYRAIVQNPNPV 600
Query: 759 IPPIFGSDEF 768
IPPIFG+DEF
Sbjct: 601 IPPIFGTDEF 610
>gi|224576398|gb|ACN56892.1| phytochrome A [Sisymbrium altissimum]
Length = 576
Score = 1016 bits (2626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/576 (85%), Positives = 532/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ E D +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDASNSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHS QLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSSQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIGGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|224576292|gb|ACN56839.1| phytochrome A [Heliophila sp. MAB-2008]
Length = 577
Score = 1016 bits (2626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/577 (83%), Positives = 529/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+ K GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHDDDHGEVVSEVAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL F++TLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFEITLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTHPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPR+VPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRYVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAP+GIV+QSPNIMDLVKCDGAAL+YK+KIW+LG+TP++F L +I SWL E H
Sbjct: 241 CDMLMRDAPVGIVSQSPNIMDLVKCDGAALMYKDKIWKLGITPSEFHLQEIASWLCENHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALG+ VCGMAAVRIS KDMIFWFRS TA EV+WGGAKH+P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGNSVCGMAAVRISSKDMIFWFRSHTAGEVKWGGAKHDPN 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+KDD R+MHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRNAFKD D++T I
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDGEATDVNTNII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEM+RLIETATVPILAVD DG+VNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGVQELEAVTSEMIRLIETATVPILAVDSDGVVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH L+LVEDSS++ VK+ML+ AL+G EEQNIQFEIKTH S + PI+LIVNACAS+D
Sbjct: 481 IGKHLLSLVEDSSVEIVKKMLHKALEGTEEQNIQFEIKTHLSGADTGPISLIVNACASKD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQ
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQ 577
>gi|224576226|gb|ACN56806.1| phytochrome A [Biscutella didyma]
Length = 577
Score = 1015 bits (2625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/577 (85%), Positives = 532/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+EEGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDEEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRK+L GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKKLLGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+KIW+LGVTP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKIWKLGVTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMI WFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAAVRISSKDMIIWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLK++G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKLDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRTDAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
L +NVVGVCFVA D+T QK VMDKFTRIEGDYKAI+Q
Sbjct: 541 LQENVVGVCFVAHDLTGQKIVMDKFTRIEGDYKAIIQ 577
>gi|224576254|gb|ACN56820.1| phytochrome A [Chorispora tenella]
Length = 578
Score = 1015 bits (2625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/577 (83%), Positives = 529/577 (91%), Gaps = 5/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVS++TKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSKVTKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL FDLTLCGSTLRAPHSCHLQYM NM SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMESIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG+TP+++QL +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGITPSEYQLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAV+I+ KDMIFWFRS TA EVRWGGAKH+P+
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVKITSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDL-DTKS 595
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D+ +T
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNNTNV 420
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
I+SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+
Sbjct: 421 IYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 656 AIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
AIGKH LTLVE+SS++ VK ML AL+G EEQN+Q EIKTH S+ + PI+L+VNACASR
Sbjct: 481 AIGKHLLTLVEESSVEIVKSMLQNALEGTEEQNVQSEIKTHLSRAHAGPISLVVNACASR 540
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIV 752
DLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+
Sbjct: 541 DLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAII 577
>gi|224576250|gb|ACN56818.1| phytochrome A [Caulanthus crassicaulis]
Length = 576
Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/576 (83%), Positives = 527/576 (91%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEP+LGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPHLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FD+TLCGSTLRAPHSC LQYM NM+SIAS+VMAVVVN+E+ EGD +T QK
Sbjct: 121 LQDEKLSFDITLCGSTLRAPHSCRLQYMANMDSIASMVMAVVVNEEDGEGDAPDSTTSQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLS 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+K+W+LG TP+++ L +I SWL E+H D
Sbjct: 241 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEYHLQEIASWLCEFHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EV WGGAKH+PD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVGWGGAKHDPDN 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNA +D T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAXRDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 GKHLLTIVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDF 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|224576324|gb|ACN56855.1| phytochrome A [Lepidium draba]
Length = 577
Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/577 (85%), Positives = 529/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSME LCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMEGLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMESIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+K+W LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWTLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETA VPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETAMVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|315377395|gb|ADU05535.1| phytochrome A [Akania bidwillii]
Length = 549
Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/549 (87%), Positives = 515/549 (93%), Gaps = 3/549 (0%)
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
PYEVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTM+QEVFELTGYDRVMAYKFH+
Sbjct: 1 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVMAYKFHD 60
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
DDHGEVVSEITK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA+HVKVLQDEKL
Sbjct: 61 DDHGEVVSEITKRGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDEKL 120
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN---TLPQKRKRLWG 363
FDLTLCGSTLRAPHSCHL YMENMNSIASLVMAVVVN+ +EE +N PQKRKRLWG
Sbjct: 121 QFDLTLCGSTLRAPHSCHLLYMENMNSIASLVMAVVVNEGDEEINNPNSAQPQKRKRLWG 180
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE ELE Q++EKNILRTQTLLCDMLMRD
Sbjct: 181 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEFELENQLVEKNILRTQTLLCDMLMRD 240
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
APLGIV+QSPNIMDLVKCDGAALLYKNKIWRLG+TP+D+QLH+I SWLSEYHMDSTGLS
Sbjct: 241 APLGIVSQSPNIMDLVKCDGAALLYKNKIWRLGMTPSDYQLHEIASWLSEYHMDSTGLST 300
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSLYDAG+ GALALGDVVCGMAAVRI+ KDM+FWFRS TA+EVRWGGAKHEP EKDD RK
Sbjct: 301 DSLYDAGFPGALALGDVVCGMAAVRITSKDMLFWFRSHTAAEVRWGGAKHEPGEKDDARK 360
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDL 603
MHPRSSFKAFLEVVKTRSLP KDYEMDAIHSLQLILRN KD+ DL+ K+IHSKL DL
Sbjct: 361 MHPRSSFKAFLEVVKTRSLPXKDYEMDAIHSLQLILRNTSKDIENTDLNAKTIHSKLNDL 420
Query: 604 KIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT 663
KIEGM+ELEA+TSEMVRLIETA VPILAVDVDGLVNGWNTKIAELTG VD+AIGKHFLT
Sbjct: 421 KIEGMQELEALTSEMVRLIETARVPILAVDVDGLVNGWNTKIAELTGFPVDRAIGKHFLT 480
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LVEDSSIDTV++ML +ALQG+EE N+QF+IKTHGS+IN PI+L+VNACASRDLH+NVVG
Sbjct: 481 LVEDSSIDTVRKMLQMALQGKEEHNVQFQIKTHGSRINAGPISLVVNACASRDLHENVVG 540
Query: 724 VCFVAQDIT 732
VCFVAQD+T
Sbjct: 541 VCFVAQDVT 549
>gi|224576246|gb|ACN56816.1| phytochrome A [Catolobus pendulus]
Length = 577
Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/577 (84%), Positives = 531/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNK+RMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKIRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKT ++ + PI+L VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTQLARADAGPISLAVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|449459392|ref|XP_004147430.1| PREDICTED: phytochrome E-like [Cucumis sativus]
Length = 1134
Score = 1014 bits (2622), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/1033 (48%), Positives = 702/1033 (67%), Gaps = 30/1033 (2%)
Query: 23 IAQTTIDAKLHADFE---TSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
+ Q DA L FE SG SF+YS SV + + ++Q TAYL IQ+G L
Sbjct: 41 LVQYNADAGLLNKFELSDASGESFNYSRSVLEAPVSVPEEQ------ITAYLSKIQRGGL 94
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
+QPFGCLLA++E +FK+I++SEN ELL + + S L IG D++ +FT S +
Sbjct: 95 VQPFGCLLAIEESSFKIISFSENCFELLGLNDDQFGSAQGKKGL-IGVDMRALFTPSSGA 153
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
+L KA E+SLLNP+ V+ +T+ KPFYAI+HR+ ++ID EP + + ++ AGA+Q
Sbjct: 154 SLAKAASSREISLLNPVWVYSRTTQKPFYAILHRIDVGIVIDLEPARSVDPALSLAGAVQ 213
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
S KLA +AI+RLQ+LPSG + LCDT+++++ +LTGYDRVM YKFH+D+HGEVVSEI +S
Sbjct: 214 SQKLAVRAISRLQALPSGDIGILCDTVVEDIQKLTGYDRVMVYKFHDDEHGEVVSEIRRS 273
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
LEPYLGLHYPA DIPQAARFLF +N++RMI DC A+ V V+Q + L L L ST+RA
Sbjct: 274 DLEPYLGLHYPAIDIPQAARFLFKQNRIRMICDCNAKPVPVIQSDDLKQPLCLVNSTIRA 333
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPL 379
PHSCHLQYM NM++++SL MA+V+N ++ RLWGLVVCH+T+PR+VPFPL
Sbjct: 334 PHSCHLQYMANMSTLSSLAMAIVMNSDDSP---------TRLWGLVVCHHTSPRYVPFPL 384
Query: 380 RYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLV 439
RYACEFL Q F + + EL+L Q+ EK IL+TQTLLCDML+R +P ++T+SP+IMDLV
Sbjct: 385 RYACEFLMQAFGLQLYMELQLASQLTEKKILKTQTLLCDMLLRGSPCALLTRSPSIMDLV 444
Query: 440 KCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGD 499
KCDGAAL YK + LG+TP + Q+ D+ W+ H DSTGLS DSL DAGY A +LGD
Sbjct: 445 KCDGAALYYKGACYLLGITPTEAQVKDLAEWILNNHGDSTGLSTDSLADAGYPEAASLGD 504
Query: 500 VVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKT 559
VCGMA RI+ KD +FWFRS A E++WGGAKH PD+KDD +MHPRSSFKAFLEV K+
Sbjct: 505 AVCGMATARITSKDFLFWFRSHVAKEIQWGGAKHHPDDKDDSGRMHPRSSFKAFLEVAKS 564
Query: 560 RSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS-KLCDLKIEGMKELEAVTSEM 618
RSL W+ E++AIHSLQLI+R +F + G D ++K+ +S +L D +++ + EL +V EM
Sbjct: 565 RSLSWEVQEINAIHSLQLIMRESFPNSG--DSNSKAENSPQLSDAEMQDINELSSVACEM 622
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRML 677
VRLIETATVPI VD GL+NGWN KI+EL GL +A+GK + +V + S T + +L
Sbjct: 623 VRLIETATVPIFGVDSTGLINGWNAKISELVGLHTGEALGKSLVNEIVHEDSRGTAEDLL 682
Query: 678 YLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTV 737
ALQG+E++N++ ++++ + + ++VNAC SRD + VVGVCFV QD+T +K V
Sbjct: 683 SCALQGKEDKNVELKLRSFRTDKEHPNVYIVVNACTSRDYTNKVVGVCFVGQDLTSEKGV 742
Query: 738 MDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAE 797
MDKF R++GDYK I+++ +PLIPP+F SDE G+CCEW AM KLTGW++ EV+ K+L E
Sbjct: 743 MDKFIRLQGDYKTIIESLSPLIPPMFVSDENGYCCEWTAAMEKLTGWRKNEVVGKMLAGE 802
Query: 798 VFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDR 857
+FG CRLK + I+L + +SGQ EK P GFF ++G Y + LL NK+ D
Sbjct: 803 IFGN---FCRLKGLDTLTRFMILLYQGISGQVTEKFPLGFFNKDGNYVDVLLTSNKRTDA 859
Query: 858 EGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMM 917
EG G CFLQ+ L L ++ A+ + K L++ K +++NPL+G+ F +++
Sbjct: 860 EGNAIGCICFLQIVQPNLHGVLEGLGTGDREAILQHKELSFLKHEVKNPLNGLRFMHELL 919
Query: 918 EGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQV 977
+ + QK L TS C+RQ+ I++D D S+ G +++ +F L VL A I Q+
Sbjct: 920 VNSGITENQKLFLDTSDACERQIMTIIEDMDFRSLEGGQVEINRQDFLLGSVLDAIICQI 979
Query: 978 MMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVP--NGG-QLMVSSS 1034
M+ + I++ +E E+I + TL GD I+LQ VL+DFL + + P +G ++ +SS
Sbjct: 980 MIVVRERNIQLFHEIPEEIKTLTLCGDQIKLQMVLSDFLLNIVQYAPVLDGWVEIKISSG 1039
Query: 1035 LTKDQLG-QSVHL 1046
L Q G + +HL
Sbjct: 1040 LKLIQDGNEHIHL 1052
>gi|224576362|gb|ACN56874.1| phytochrome A [Olimarabidopsis pumila]
Length = 577
Score = 1013 bits (2620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/577 (85%), Positives = 531/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPV PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVNPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVR+IVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRVIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQ FAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQGFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEISSWLCECHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|89331127|emb|CAJ80930.1| phytochrome A [Lathraea squamaria]
Length = 612
Score = 1013 bits (2620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/612 (78%), Positives = 545/612 (89%), Gaps = 6/612 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLIIDFEPVKP+EVPMTAAGALQSYKLA+KAI+RLQSL SGS++RL
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLSSGSIKRL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFHEDDHGEV +EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QDE LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM++V
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSIV 180
Query: 343 VND--EEEEGDNTLPQ--KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ EE D T Q KRKRLWGLVVCHNT+PRFVPFPLRYACEFL+QVFAIHVNKEL
Sbjct: 181 VNEGTEESAPDETSQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLSQVFAIHVNKEL 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
E E Q+LEKNILRTQTLLCDML+RDA LGIV+QSPN+MDLV CDG+ LL+KN+ +R+G+T
Sbjct: 241 ESENQMLEKNILRTQTLLCDMLLRDALLGIVSQSPNVMDLVTCDGSVLLHKNQKYRIGIT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGDV+CGMAAVRI+ +D +FWF
Sbjct: 301 PRDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVICGMAAVRITDRDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TASE+ WGGAKHE E+DDGRKMHPRSSFKAFLE VKTRSLPWKD+E+DAIHSLQLI
Sbjct: 361 RSHTASEIHWGGAKHELGERDDGRKMHPRSSFKAFLEYVKTRSLPWKDFELDAIHSLQLI 420
Query: 579 LRNA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
LRNA K++ DL+ I ++L +L+I+G++ELEAVTSEMVRLIETA+VPI AV VDG
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+LTGL VDKAIG+HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIKTH
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGEHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
+ PI+LIVNAC SRD+ +NVVGVCF+AQDIT QK+VMDKFTRIEGDY+AIVQNPN
Sbjct: 541 SPNSDSSPISLIVNACVSRDVRENVVGVCFIAQDITIQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEF 768
P+IPP FG+DEF
Sbjct: 601 PIIPPTFGTDEF 612
>gi|224576310|gb|ACN56848.1| phytochrome A [Ianhedgea minutiflora]
Length = 577
Score = 1013 bits (2619), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/577 (84%), Positives = 531/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QE FELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEAFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTIQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q++EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP+DF L +I SWL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGNTPSDFHLQEITSWLCENHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++T+ I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTRVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN++FEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVEFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKA++Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAVIQ 577
>gi|224576234|gb|ACN56810.1| phytochrome A [Brassica oleracea]
Length = 573
Score = 1013 bits (2619), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/573 (84%), Positives = 527/573 (91%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQDEKL FDLTLCGSTLRAPH+CHLQYM NM+SIASLVMAVVVN+EE+ T PQKRKR
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHTCHLQYMANMDSIASLVMAVVVNEEEDGEATTTPQKRKR 180
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRF PFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDML
Sbjct: 181 LWGLVVCHNTTPRFAPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG TP++F L +I WL E+H DSTG
Sbjct: 241 MRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGKTPSEFHLQEIAFWLCEHHADSTG 300
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ GALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD++DD
Sbjct: 301 LSTDSLHDAGFPGALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDRDD 360
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD D++T IHSKL
Sbjct: 361 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEATDVNTNIIHSKL 420
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AIGKH
Sbjct: 421 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIGKH 480
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
LTLVEDSS+D V+RML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS+DLH+N
Sbjct: 481 LLTLVEDSSVDIVQRMLENALEGTEEQNVQFEIKTHLSRTDAGPISLVVNACASKDLHEN 540
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
VVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 VVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQ 573
>gi|224576294|gb|ACN56840.1| phytochrome A [Hesperidanthus jaegeri]
Length = 576
Score = 1013 bits (2618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/576 (84%), Positives = 533/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMER+CDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERVCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQA RFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQATRFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDG+ALLYK+K+W+LG+TP++F L +I SWL E+H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGSALLYKDKVWKLGITPSEFHLQEIASWLCEHHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS T EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTTGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T+D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETIDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRDL
Sbjct: 481 GKHLLTIVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSSADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|224576372|gb|ACN56879.1| phytochrome A [Planodes virginica]
Length = 577
Score = 1013 bits (2618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/577 (84%), Positives = 528/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPM AAGALQSYKLAAKAITRLQSLPSGSMER CDTM+QEVFELT YDRVM
Sbjct: 1 DFEPVKPYEVPMAAAGALQSYKLAAKAITRLQSLPSGSMERPCDTMVQEVFELTAYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE EGD T PQ
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP+DF L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSDFHLQEIASWLYEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS T EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPKALSLGDAVCGMAAVRISTKDMIFWFRSHTTGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTSQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576400|gb|ACN56893.1| phytochrome A [Schoenocrambe linifolia]
Length = 576
Score = 1013 bits (2618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/576 (84%), Positives = 532/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLA KAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAVKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHL+YM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLRYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLY +K+W+LG+TP+DF L +I SWLSEYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYIDKVWKLGITPSDFHLQEIASWLSEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA VRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGVVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
G+H LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNAC SRDL
Sbjct: 481 GRHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACVSRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QK+VMDKFTRIEGDYKAIVQ
Sbjct: 541 HENVVGVCFVAHDLTGQKSVMDKFTRIEGDYKAIVQ 576
>gi|224576266|gb|ACN56826.1| phytochrome A [Descurainia sophia]
Length = 577
Score = 1013 bits (2618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/577 (84%), Positives = 531/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYP TDIPQAARFLFMKNKVRM VDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPGTDIPQAARFLFMKNKVRMTVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVV++E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVSEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRK+LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q++EKNILRTQTLL
Sbjct: 181 KRKKLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP+DF L +I SW+ EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSDFHLQEIASWMCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIA+LTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIADLTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN++FEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVEFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576384|gb|ACN56885.1| phytochrome A [Romanschulzia sp. MAB-2008]
Length = 576
Score = 1012 bits (2616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/576 (84%), Positives = 533/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFA+HVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAMHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL + H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCDNHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ A+ALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRAVALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DG VNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|224576342|gb|ACN56864.1| phytochrome A [Neotorularia korolkowii]
Length = 569
Score = 1011 bits (2615), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/569 (84%), Positives = 521/569 (91%), Gaps = 4/569 (0%)
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDD
Sbjct: 1 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDD 60
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V QDEKL F
Sbjct: 61 HGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVFQDEKLSF 120
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQKRKRLWGL 364
DLTLCGSTLRAPHSCHLQ M NM+SIASLVMAVVVN+E+ EGD PQKRKRLWGL
Sbjct: 121 DLTLCGSTLRAPHSCHLQCMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQKRKRLWGL 180
Query: 365 VVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA 424
VVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDML+RDA
Sbjct: 181 VVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDMLIRDA 240
Query: 425 PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSAD 484
PLGIVTQSPN+MDLVKCDGAALLYK+K+W+LG+TP+D+QL +I SWL EYH DSTGLS D
Sbjct: 241 PLGIVTQSPNVMDLVKCDGAALLYKDKVWKLGITPSDYQLQEIASWLCEYHTDSTGLSTD 300
Query: 485 SLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKM 544
SL+DAGY AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+KDD R+M
Sbjct: 301 SLHDAGYPRALSLGDSVCGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDPDDKDDARRM 360
Query: 545 HPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLK 604
HPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNA KD D++TK IHSKL DLK
Sbjct: 361 HPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNALKDGEPTDVNTKIIHSKLNDLK 420
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTL 664
I+GM+ELEAVTSEMVRLIETATVPILAVD DG VNGWNTKIAELTGL VD+AIGKHFLTL
Sbjct: 421 IDGMQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEAIGKHFLTL 480
Query: 665 VEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGV 724
VEDSS++ VKRML AL+G EEQN+QFEIKTH + + PI+L+VNACASRDLH+NVVGV
Sbjct: 481 VEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLLRADAGPISLVVNACASRDLHENVVGV 540
Query: 725 CFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
CFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 CFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 569
>gi|224576276|gb|ACN56831.1| phytochrome A [Erysimum capitatum]
Length = 577
Score = 1011 bits (2615), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/577 (84%), Positives = 530/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK KIWRLG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKIWRLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
H KL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HFKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VK+ML AL+G EEQN+QFEIKTH S+ + P++L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKKMLENALEGTEEQNVQFEIKTHLSRADAGPMSLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEG YKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGVYKAIIQ 577
>gi|224576272|gb|ACN56829.1| phytochrome A [Dimorphocarpa wislizeni]
Length = 577
Score = 1011 bits (2614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/577 (84%), Positives = 533/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+++ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEDDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRK+LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKKLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+Q+PNIMDLVKCDGAALL+K+KIW+LG TP+++ LH+I SWL EYHM
Sbjct: 241 CDMLMRDAPLGIVSQNPNIMDLVKCDGAALLHKDKIWKLGTTPSEYHLHEIASWLCEYHM 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA E+RWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPMALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEIRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSV++A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVNEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IG+H LTLVEDSS++ VKRML AL+G EEQN+QFEIKT S + PI+L+VNACASRD
Sbjct: 481 IGQHLLTLVEDSSVEVVKRMLENALEGTEEQNVQFEIKTLPSTTDAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QK VMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKAVMDKFTRIEGDYKAIIQ 577
>gi|224576348|gb|ACN56867.1| phytochrome A [Neuontobotrys elloanensis]
Length = 576
Score = 1011 bits (2614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/575 (85%), Positives = 531/575 (92%), Gaps = 3/575 (0%)
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMA
Sbjct: 2 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 61
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+VL
Sbjct: 62 YKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVL 121
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQKR 358
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQKR
Sbjct: 122 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQKR 181
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCD
Sbjct: 182 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCD 241
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
MLMRDAP+GIV+QSPNIMDLVKCDGAALLYK+K+W+LG TPN+F L +I SWL EYH DS
Sbjct: 242 MLMRDAPMGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPNEFHLQEIASWLCEYHTDS 301
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD++
Sbjct: 302 TGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDR 361
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IHS
Sbjct: 362 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIHS 421
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
KL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DG +NG NTKIAELTGL VD+AIG
Sbjct: 422 KLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGSINGCNTKIAELTGLPVDEAIG 481
Query: 659 KHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLH 718
KH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDLH
Sbjct: 482 KHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLH 541
Query: 719 DNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 542 ENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|224576230|gb|ACN56808.1| phytochrome A [Boechera shortii]
Length = 575
Score = 1011 bits (2614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/575 (85%), Positives = 528/575 (91%), Gaps = 4/575 (0%)
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EPVKPYEVPMTAAGALQSY+LAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAY
Sbjct: 1 EPVKPYEVPMTAAGALQSYELAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAY 60
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +VLQ
Sbjct: 61 KFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVLQ 120
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQKR 358
DEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQKR
Sbjct: 121 DEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTIQPQKR 180
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCD
Sbjct: 181 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCD 240
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
MLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH DS
Sbjct: 241 MLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHTDS 300
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL+DAG AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD++
Sbjct: 301 TGLSTDSLHDAGLPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDR 360
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IHS
Sbjct: 361 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIHS 420
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
KL DLKI+G++ELE VTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+AIG
Sbjct: 421 KLNDLKIDGIQELEPVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIG 480
Query: 659 KHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLH 718
KH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDLH
Sbjct: 481 KHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLH 540
Query: 719 DNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 ENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 575
>gi|224576346|gb|ACN56866.1| phytochrome A [Neuontobotrys elloanensis]
Length = 576
Score = 1011 bits (2614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/576 (84%), Positives = 531/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVR+IVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRLIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVM VVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMGVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAF EVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFHEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DG +NGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGSINGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPIGLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|224576264|gb|ACN56825.1| phytochrome A [Cusickiella quadricostata]
Length = 577
Score = 1011 bits (2613), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/577 (84%), Positives = 530/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK++IW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDRIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+ GD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSPGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAV SEMVRLIETATVPILAVD DGLVNGWNTKI+ELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVASEMVRLIETATVPILAVDSDGLVNGWNTKISELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNA ASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNAYASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576390|gb|ACN56888.1| phytochrome A [Shangrilaia nana]
Length = 575
Score = 1011 bits (2613), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/575 (84%), Positives = 531/575 (92%), Gaps = 2/575 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVP TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPTTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKR 358
Q+EKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ + ++ PQKR
Sbjct: 121 FQEEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGDAPDSTAQPQKR 180
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCD
Sbjct: 181 KRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCD 240
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
MLMRDAPLGIVTQSPN+MDLVKCDGAALLYK+KIW+LG+TP+D+QL +I SWL EYH DS
Sbjct: 241 MLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKIWKLGITPSDYQLQEIASWLCEYHTDS 300
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD++
Sbjct: 301 TGLSTDSLHDAGFPRALSLGDSVCGMAAVRISTKDMIFWFRSYTAGEVRWGGAKHDPDDR 360
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD D++TK IHS
Sbjct: 361 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEITDVNTKIIHS 420
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
KL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AIG
Sbjct: 421 KLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIG 480
Query: 659 KHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLH 718
KH LTLVEDSS++ VKRML ALQG EEQN+QFEIKTH S+ + PI+L+VNACASRDLH
Sbjct: 481 KHLLTLVEDSSVEIVKRMLENALQGTEEQNVQFEIKTHLSRGDAGPISLVVNACASRDLH 540
Query: 719 DNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 ENVVGVCFVAHDLTAQKTVMDKFTRIEGDYKAIIQ 575
>gi|224576204|gb|ACN56795.1| phytochrome A [Alliaria petiolata]
Length = 577
Score = 1010 bits (2612), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/577 (84%), Positives = 531/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERLCDTM QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVR+IVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRVIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T P
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPP 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVV+TRSLPWKDYEMDAIHSLQLILRNAFKD T D++T+ I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVRTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTRII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSGADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576260|gb|ACN56823.1| phytochrome A [Conringia persica]
Length = 577
Score = 1010 bits (2611), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/577 (84%), Positives = 530/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFP RYACEFLAQVFAIHVN E+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPFRYACEFLAQVFAIHVNMEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG+TP++F + +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGITPSEFHMQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL D KI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNT+IAELTGL VD+A
Sbjct: 421 HSKLNDPKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTRIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
L +NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LQENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576360|gb|ACN56873.1| phytochrome A [Noccaea sp. MAB-2008]
Length = 577
Score = 1009 bits (2610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/577 (84%), Positives = 532/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGAL+SYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALRSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTL GSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLRGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG+TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGITPSEFHLQEIASWLCEYHA 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS T EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSDTDGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVED+S++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDTSMEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576228|gb|ACN56807.1| phytochrome A [Boechera platysperma]
Length = 577
Score = 1009 bits (2610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/577 (84%), Positives = 529/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTIQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKC+GAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCNGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VC MAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCRMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VK ML AL+G EEQN+QFEIKTH S+ + PI+L VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKGMLENALEGTEEQNVQFEIKTHLSRADAGPISLAVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKT+MDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTMMDKFTRIEGDYKAIIQ 577
>gi|224576244|gb|ACN56815.1| phytochrome A [Cardamine pulchella]
Length = 577
Score = 1009 bits (2610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/577 (84%), Positives = 530/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYK HEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKSHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG P+DF L +I SWLSEYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTNPSDFHLQEIASWLSEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPKALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVK+RSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKSRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SKL +LKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 YSKLHELKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + +PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAEPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVM+KF RIEGDY AI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMEKFIRIEGDYAAIIQ 577
>gi|224576338|gb|ACN56862.1| phytochrome A [Mostacillastrum orbignyanum]
Length = 576
Score = 1009 bits (2610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/576 (84%), Positives = 531/576 (92%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGY+RVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYNRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVM VVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMGVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KD+IFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDLIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAV DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVGSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VE SS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRDL
Sbjct: 481 GKHLLTIVEGSSVEIVKRMLENALEGTEEQNVQFEIKTHLSSADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|224576280|gb|ACN56833.1| phytochrome A [Eutrema altaicum]
Length = 577
Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/577 (84%), Positives = 531/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ E D T PQ
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEADAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q++EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAV+IS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVKISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIA+LTGL VD+A
Sbjct: 421 YSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIADLTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH L LVEDSS+D VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLALVEDSSLDIVKRMLVSALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576316|gb|ACN56851.1| phytochrome A [Iodanthus pinnatifidus]
Length = 577
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/577 (84%), Positives = 527/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN----TLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ E D T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDTPDSTTKPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHN TPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNRTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++ L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSELHLQEIASWLYEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD CGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPNALALGDAACGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+ FEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLQNALEGTEEQNVLFEIKTHQSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576252|gb|ACN56819.1| phytochrome A [Chalcanthus renifolius]
Length = 577
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/577 (84%), Positives = 530/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEV MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVSMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFHRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKT S+ + PI+L+V+AC+SRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTLLSRADAGPISLVVSACSSRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576212|gb|ACN56799.1| phytochrome A [Arabidopsis thaliana]
Length = 577
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/577 (84%), Positives = 530/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLT CGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTWCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+EL+ Q++EKNI RTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNIXRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYHM
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHM 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
D TGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DLTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHP SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPTSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SK DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 YSKPNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576282|gb|ACN56834.1| phytochrome A [Eutrema heterophyllum]
Length = 577
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/577 (84%), Positives = 530/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDASDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q++EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SW EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWPCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++ K I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNAKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 YSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKT S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTRLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVALDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576356|gb|ACN56871.1| phytochrome A [Noccaea cochleariformis]
Length = 577
Score = 1008 bits (2606), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/577 (84%), Positives = 530/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN----TLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSATQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQ LL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQALL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAAL+YK+KIWRLG+TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALMYKDKIWRLGITPSEFHLQEIASWLCEYHR 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VC MAAVRIS KDM+FWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCAMAAVRISSKDMVFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVED+S++ VK ML ALQG EEQN+QFEI TH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDTSMEIVKGMLENALQGTEEQNVQFEIXTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+N+VGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENMVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|89331123|emb|CAJ80928.1| phytochrome A [Lathraea clandestina]
Length = 612
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/612 (78%), Positives = 544/612 (88%), Gaps = 6/612 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLIIDFEPVKP+ VP TAAGALQSYKLA+K+I RLQSLPSGS+E L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHGVPTTAAGALQSYKLASKSIARLQSLPSGSIEWL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVF+LTGYDRVM YKFHEDDHGEV++EITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFQLTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+QDE LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEE---GDNTLP-QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ E+ G+ + KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIH+NKEL
Sbjct: 181 VNEGNEDAAPGETSQQLDKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHLNKEL 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
ELE Q+L+KNILRTQTLLCDML+ DAPLGIV+QSPN+MDLVKCDG+ LL+KN+ +RLG+T
Sbjct: 241 ELENQMLQKNILRTQTLLCDMLLCDAPLGIVSQSPNVMDLVKCDGSILLHKNQKYRLGIT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GAL LGDVVCGMAAVRI+ +D +FWF
Sbjct: 301 PTDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALDLGDVVCGMAAVRITDRDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS TASEVRW GAKHE E+DDGRKMHPRSSFKAFLEVVKTRSLPWKD+EMDAIHSLQLI
Sbjct: 361 RSHTASEVRWSGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 579 LRNA-FKDVGTL-DLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
LR A K++ DL+ I ++L +L+I+G++ELEAVTSE+VRLIETA+VPI AV VDG
Sbjct: 421 LRKASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEIVRLIETASVPIFAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
LVNGWNTKIA+ TGL VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIKTH
Sbjct: 481 LVNGWNTKIADFTGLPVDKAIGVHFLSLVEESSAEAVSKMLELALEGKEEQNVHFEIKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
+ PI+LIVNACASRD+ +NVVGVCF+AQDIT QK+VMDKFTRIEGDY+AIVQNPN
Sbjct: 541 SPNSDSSPISLIVNACASRDVRENVVGVCFIAQDITTQKSVMDKFTRIEGDYRAIVQNPN 600
Query: 757 PLIPPIFGSDEF 768
P+IPPIFG+DEF
Sbjct: 601 PVIPPIFGTDEF 612
>gi|224576284|gb|ACN56835.1| phytochrome A [Exhalimolobos weddellii]
Length = 575
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/577 (84%), Positives = 529/577 (91%), Gaps = 6/577 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ +GD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGDGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
+STGLS DSL+DAG+ +LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 ESTGLSTDSLHDAGF--PRSLGDPVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 358
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 359 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 418
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 419 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLLVDEA 478
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS+D VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 479 IGKHLLTLVEDSSVDIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 538
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 539 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 575
>gi|357450589|ref|XP_003595571.1| Phytochrome E [Medicago truncatula]
gi|87241383|gb|ABD33241.1| Bacteriophytochrome [Medicago truncatula]
gi|355484619|gb|AES65822.1| Phytochrome E [Medicago truncatula]
Length = 1122
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/1059 (49%), Positives = 699/1059 (66%), Gaps = 42/1059 (3%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGG 57
+S S A+S NT K + + +AQ +DA+L A+FE S G SF+YS ++
Sbjct: 12 VSLSSSAESKMNTNK--ETEKTLAQYGVDAELLAEFEQSRVYGKSFEYSKTIL------- 62
Query: 58 DQQPR--SDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVP 115
PR S+ YL IQ+G IQPFGCL+ ++E TF++I YSEN +LL
Sbjct: 63 -DPPRLVSEEKMITYLSRIQRGGFIQPFGCLVVIEESTFRIIGYSENCFQLLG------- 114
Query: 116 SVGDHPVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRV 174
+G +G IG D T+FT PS S+L KA+ E+S LNPI V +T+ KPFYAI+HR+
Sbjct: 115 DIGSEHFMGLIGVDATTLFTPPSGSSLVKAVASREISRLNPIWVRARTTEKPFYAILHRI 174
Query: 175 TGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELT 234
++ID EP + ++ +G+ QS K+A AI+RLQS + LCDT+++EV +LT
Sbjct: 175 DVGVLIDLEPARSSGPALSLSGSFQSQKMAVSAISRLQSCRREDISLLCDTVVEEVQKLT 234
Query: 235 GYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 294
GY+RVM YKFHEDDHGEVVSE +S LE YLGLHYP+ DIPQAARFLF +N+VR+I DC
Sbjct: 235 GYERVMIYKFHEDDHGEVVSETRRSDLESYLGLHYPSIDIPQAARFLFKQNRVRLIYDCH 294
Query: 295 ARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL 354
A+ VKV+Q +L L L STLR+PH CH QYM NM SIASLVMAVV+N E D T
Sbjct: 295 AKPVKVIQSRELKKPLCLVNSTLRSPHDCHKQYMANMGSIASLVMAVVIN----EKDTT- 349
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
RLWGL+VCH+T+P V FP+R+ACEF+ F + + E++L Q+ EK IL+TQT
Sbjct: 350 -----RLWGLLVCHHTSPHHVSFPVRHACEFVMHTFGMQLYMEIQLASQMEEKRILKTQT 404
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
+LCDML+RDAP GIVTQSP+IMDLVKCDGAAL Y W LG+TP Q+ DI WL
Sbjct: 405 MLCDMLLRDAPFGIVTQSPSIMDLVKCDGAALYYDENCWLLGITPTKLQVKDIAEWLLSN 464
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
+ DSTGL+ +SL DAGY GA LGD VCGMA+ RI+ + ++FWFRS TA E++WGGAKH
Sbjct: 465 YSDSTGLTTESLVDAGYPGATLLGDAVCGMASARINQRHILFWFRSHTAKEIQWGGAKHH 524
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P +KDDG KM+PR+SFKAFLEV+K++SLPW+ E++AIHSLQLI+++ F+D T
Sbjct: 525 PTDKDDGGKMNPRTSFKAFLEVLKSKSLPWEISEINAIHSLQLIMQDLFQDTDNTCPKTL 584
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
K D I G E+ ++ EMVRLIETA VPI VD DGL+NGWN KIAELTGL
Sbjct: 585 KDFEK-SDALIGGSHEISSIALEMVRLIETAAVPIFGVDSDGLINGWNVKIAELTGLPTS 643
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
+A+GK +V S +T+ +L ALQGQ+ +N++ +I + + L++++C
Sbjct: 644 EAMGKSLENEVVHVDSRETLTNILRRALQGQDNKNVELKINRFVLHQEKEVVYLMISSCI 703
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
SRD + +VGV FV QDIT +K ++ KF ++EGDYKAI+ + NPLIPPIF SDE C E
Sbjct: 704 SRDYTNAIVGVGFVGQDITFEKVIVKKFIKLEGDYKAIMHSLNPLIPPIFASDENACCSE 763
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM ++TGWK++EVI K+LL E+FG + CRLK Q+A + I+L +SGQD EK
Sbjct: 764 WNVAMERVTGWKKDEVIGKMLLGEIFG---SFCRLKGQDALTDFMILLYHGISGQDSEKS 820
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PFGF+ RNGK+ E + NK+ D + G FCFL + + +L Q R + + +
Sbjct: 821 PFGFYDRNGKFIETYITTNKRTDASEDIIGCFCFLHVVTEDLNQPFQGHRSKCRQRISKS 880
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY ++++NPL+GI F+ K++E T + QK+LL TS C+RQ+ I++D DL SI
Sbjct: 881 KELAYILQEMKNPLNGIRFTHKLLENTGISENQKQLLDTSEACERQIMAIIEDIDLGSIN 940
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
+G L M EF L +L A +SQVMM K +++ +E +++I + +LYGD IRLQ VL+
Sbjct: 941 EGTWKLNMKEFLLGNILDAVVSQVMMLIKGKDLQMFHEISDKIQTLSLYGDQIRLQMVLS 1000
Query: 1014 DFLS--ISINFVPNGG-QLMVSSSLTKDQLGQS-VHLAY 1048
D L +S PNG ++ ++ L Q G +HL +
Sbjct: 1001 DILHNIVSHTPSPNGWIEMKITPGLKIIQDGNEFIHLKF 1039
>gi|224576428|gb|ACN56907.1| phytochrome A [Turritis glabra]
Length = 577
Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/577 (84%), Positives = 529/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTL APHSCHLQYM NM+SIASLV+AVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLWAPHSCHLQYMANMDSIASLVVAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS D L+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDGLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVV TRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVXTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS D
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLEKALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASGD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH++VVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHESVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576344|gb|ACN56865.1| phytochrome A [Nerisyrenia johnstonii]
Length = 577
Score = 1007 bits (2603), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/577 (84%), Positives = 532/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 LQDEKLTFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTIQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRK+LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHV+KE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKKLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVSKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+Q+PNIMDLVKCDGAALL+K+KIW+LG TP+++ LH++ +WL EYHM
Sbjct: 241 CDMLMRDAPLGIVSQNPNIMDLVKCDGAALLHKDKIWKLGTTPSEYHLHELAAWLCEYHM 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA E+RWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPMALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEIRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T+D +TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETIDENTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+GM+ELEAVT+EMVRLIETATVPILAVD DG VNGWNTKIAELTGLSV++A
Sbjct: 421 HSKLNDLKIDGMQELEAVTNEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLSVNEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQNIQFEIKT SK + PI+L+VNAC SRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLENALEGNEEQNIQFEIKTLPSKADAGPISLVVNACTSRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCF+A D+T QK VMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFIAHDLTGQKAVMDKFTRIEGDYKAIIQ 577
>gi|224576290|gb|ACN56838.1| phytochrome A [Goldbachia laevigata]
Length = 576
Score = 1007 bits (2603), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/576 (85%), Positives = 529/576 (91%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERLCDTM QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELEDQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW LG TP++F L +I SWLSEYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWNLGTTPSEFHLQEIASWLSEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETNDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAE TGL VD+AI
Sbjct: 421 SKLHDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAEPTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSEGIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 RENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|224576352|gb|ACN56869.1| phytochrome A [Neuontobotrys frutescens]
Length = 576
Score = 1006 bits (2602), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/576 (84%), Positives = 529/576 (91%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYK H+DDHGEVVSE+ K GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKSHDDDHGEVVSEVAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK+LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKKLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELEKQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+Q PNIMDLVKCDGAALLYK+K+W+LG TPN+F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQCPNIMDLVKCDGAALLYKDKVWKLGTTPNEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISLKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DG VNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
KH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 EKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|224576304|gb|ACN56845.1| phytochrome A [Hirschfeldia incana]
Length = 577
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/577 (84%), Positives = 529/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELT YDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTEYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYP TDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPTTDIPQAARFLFMKNKVRMIVDCNAKHCRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG----DNTLPQ 356
LQDEKL F+LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EG D+T PQ
Sbjct: 121 LQDEKLSFELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGADAPDSTAPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP+D+ L +I SWL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSDYHLQEIASWLCECHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMA VRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDAVCGMAVVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAE TGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAEQTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAIVQ
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIVQ 577
>gi|224576370|gb|ACN56878.1| phytochrome A [Physaria rosei]
Length = 577
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/577 (83%), Positives = 528/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVF LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFGLTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFL QVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLTQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKC GAALLYK+K+W+LG TP++F L ++ SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCGGAALLYKDKMWKLGTTPSEFHLQELASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETA VPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLSDLKIDGIQELEAVTSEMVRLIETAMVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN++FEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVRFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
+++NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 VNENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576296|gb|ACN56841.1| phytochrome A [Hesperidanthus suffrutescens]
Length = 576
Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/576 (84%), Positives = 528/576 (91%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMER+CDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERVCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLF KNKVRMIVDC A HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFTKNKVRMIVDCNAEHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHL+YM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLRYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q+ EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMXEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TP +F L +I SWL+EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPTEFHLQEIASWLNEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDA HSLQLILRNAFKD T D++TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDATHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DG VNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 RENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|89331057|emb|CAJ80895.1| phytochrome A [Castilleja coccinea]
Length = 591
Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/591 (80%), Positives = 530/591 (89%), Gaps = 3/591 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEP KP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGSME+LCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPAKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMEQLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
YKFH+DDHGEV+SE+TK GLEPY+GLHYPATDIPQAARFLF+KNKVRMI DCRA HVKV
Sbjct: 61 IYKFHDDDHGEVLSEVTKPGLEPYVGLHYPATDIPQAARFLFLKNKVRMICDCRANHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKR 358
+QD+ LPFDLT CGSTLRAPHSCHLQY ENMNSIASLVM+VVVN+ E+G ++ P K+
Sbjct: 121 IQDDNLPFDLTSCGSTLRAPHSCHLQYTENMNSIASLVMSVVVNEGNEDGPDSSSHPDKK 180
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNT+PRFVPFPLR ACEFLAQVFAIHVNKE+ELE Q+LEKNILRTQTLLCD
Sbjct: 181 KRLWGLVVCHNTSPRFVPFPLRCACEFLAQVFAIHVNKEIELENQMLEKNILRTQTLLCD 240
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
ML+RDAPLGIV+QSPN+MD VKCDGA LLYK K +RLG TP+DFQ+ DIVSWL EYH +S
Sbjct: 241 MLLRDAPLGIVSQSPNVMDFVKCDGAILLYKTKNYRLGKTPSDFQIRDIVSWLDEYHHES 300
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSLYDAG+ GALALGD VCGMAAVRI+ D +FWFRS TA+E+RWGG KHEP EK
Sbjct: 301 TGLSTDSLYDAGFPGALALGDAVCGMAAVRITNTDWLFWFRSHTAAEIRWGGGKHEPGEK 360
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGT-LDLDTKSIH 597
DDGRKMHPR SFKAFLEVVKTRSLPWKD+EMDAIHSLQLILRNA G +D+D K IH
Sbjct: 361 DDGRKMHPRLSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNASNKEGADMDVDGKEIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
++L DL+++G+KELEAVTSEMVRLIETA+VPI AVD+DGLVNGWNTKIA+LTGL VDKAI
Sbjct: 421 ARLNDLQLDGIKELEAVTSEMVRLIETASVPIFAVDMDGLVNGWNTKIADLTGLPVDKAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
G+HFL LVEDSS D V +ML LALQG EEQN+QFEIKTHG + PI+LIVNACAS D+
Sbjct: 481 GRHFLGLVEDSSADAVNKMLELALQGNEEQNVQFEIKTHGLRSESGPISLIVNACASWDV 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
+NVVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN LIPPIFG+DEF
Sbjct: 541 KENVVGVCFIAQDITIQKSMMDKFTRIEGDYRAIVQNPNQLIPPIFGTDEF 591
>gi|224576376|gb|ACN56881.1| phytochrome A [Polyctenium fremontii]
Length = 577
Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/577 (84%), Positives = 529/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+++ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEDDGEGDIPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLR ACEFLAQVFAIHVNKE+EL+ QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRCACEFLAQVFAIHVNKEVELDNQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL YH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCIYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS DMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSTDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IG H LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGMHLLTLVEDSSVEIVKRMLENALEGSEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576240|gb|ACN56813.1| phytochrome A [Camelina microcarpa]
Length = 577
Score = 1005 bits (2599), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/577 (84%), Positives = 527/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+ +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKRARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILR QTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRAQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPN+MDLVKCDGAALLYK+K+W+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNVMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD + D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH L LVEDSS++ VKRML AL+G EEQN+QFEIKT ++ + PI+L+VNACASRD
Sbjct: 481 IGKHLLILVEDSSVEIVKRMLENALEGTEEQNVQFEIKTQLTRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576418|gb|ACN56902.1| phytochrome A [Synthlipsis greggii]
Length = 577
Score = 1005 bits (2599), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/577 (83%), Positives = 531/577 (92%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTIQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRK+LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHV+KE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKKLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVSKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+Q+PNIMDLVKCDGAALL+K+KIW+LG TP++F +H+I SWL EYHM
Sbjct: 241 CDMLMRDAPLGIVSQNPNIMDLVKCDGAALLHKDKIWKLGTTPSEFHMHEIASWLCEYHM 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA E+RWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPMALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEIRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T+D +TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETIDENTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVT+EMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSV++A
Sbjct: 421 HSKLNDLKIDGIQELEAVTNEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVNEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGK LTLVEDSS++ VKRML AL+G EEQN+QFEIKT SK + PI+L+VNAC SRD
Sbjct: 481 IGKQLLTLVEDSSVEIVKRMLENALEGNEEQNVQFEIKTLPSKADAGPISLVVNACTSRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCF+A D+T QK VMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFIAHDLTGQKAVMDKFTRIEGDYKAIIQ 577
>gi|91064674|emb|CAJ87070.1| phytochrome A [Alonsoa sp. Wood 18362]
Length = 606
Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/607 (77%), Positives = 537/607 (88%), Gaps = 2/607 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPV+ +E PMTAAGALQSYKLA KAI RLQ+LPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVRSHESPMTAAGALQSYKLAGKAINRLQALPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV +E+TK GLEPY GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMTYKFHDDDHGEVFTEVTKPGLEPYAGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HVKV+QDEKLPF+LTLCGSTLRA HSCHLQYMENMNS+ASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVKVIQDEKLPFNLTLCGSTLRAAHSCHLQYMENMNSVASLVMSVV 180
Query: 343 VNDEEEEG-DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 401
+N+ EEG D + PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFL QVFA HVNKELELE
Sbjct: 181 INEGGEEGPDPSQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLTQVFATHVNKELELE 240
Query: 402 YQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPND 461
QILEKNIL TQTLLCDML+RDAPLG+V+QSP++M+LVKCDGAALLYKNK +RLG+TP D
Sbjct: 241 NQILEKNILWTQTLLCDMLLRDAPLGVVSQSPSVMNLVKCDGAALLYKNKKYRLGLTPTD 300
Query: 462 FQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQ 521
+Q+ DI+SWL EYH DSTG S DSLYDAG+ GALALGD VCGMA V+I+ KD +FWFRS
Sbjct: 301 YQIRDIISWLDEYHRDSTGFSTDSLYDAGFPGALALGDAVCGMAGVQITDKDWLFWFRSH 360
Query: 522 TASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 581
TA+E+RWGGAKHE D KDDGRKMHPRSSF AFLEVVKTRSLPWKDYEMDA+HS+QLILRN
Sbjct: 361 TAAEIRWGGAKHEQDGKDDGRKMHPRSSFNAFLEVVKTRSLPWKDYEMDAMHSMQLILRN 420
Query: 582 AFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGW 641
AF + + +T+++ ++L DL+++G++E+EAVTSEMVRLIETATVPILAVDVDG+VNGW
Sbjct: 421 AFIEAKAKESETEAVRARLNDLRVDGVQEIEAVTSEMVRLIETATVPILAVDVDGVVNGW 480
Query: 642 NTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKIN 701
NTKIA+LT L +D+AIG+HFLTLVEDSS DTV++ML LALQG+++Q K H
Sbjct: 481 NTKIADLTCLPIDEAIGQHFLTLVEDSSADTVRKMLELALQGKKKQMYNSRSK-HMVPEA 539
Query: 702 DDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPP 761
+ NACASRD+ +NVVG CF+AQDIT QK++MDKFT+IEGDYKAIVQNPNPLIPP
Sbjct: 540 SPGRSPCRNACASRDMKENVVGACFIAQDITAQKSIMDKFTKIEGDYKAIVQNPNPLIPP 599
Query: 762 IFGSDEF 768
IFG+DEF
Sbjct: 600 IFGTDEF 606
>gi|224576358|gb|ACN56872.1| phytochrome A [Noccaea sp. MAB-2008]
Length = 577
Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/577 (84%), Positives = 528/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+ IW+LG+TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDMIWKLGITPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL LGD VCGMAAVRIS KDMIFWFR+ TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALGLGDSVCGMAAVRISSKDMIFWFRAHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLE VKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEAVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++EL AVTSE VRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELGAVTSETVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLV DSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVGDSSMEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576270|gb|ACN56828.1| phytochrome A [Dilophia salsa]
Length = 577
Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/577 (84%), Positives = 528/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD PQ
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLA+VFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLARVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+KIW+LG+TP+++QL DI WL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKIWKLGMTPSEYQLQDIALWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGG KH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISTKDMIFWFRSHTAGEVRWGGEKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD D++T +
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGENTDVNTNIV 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SKL DLKI+GM+ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKI ELTGL VD+A
Sbjct: 421 YSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIGELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLDNALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
L +NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LRENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576378|gb|ACN56882.1| phytochrome A [Camelinopsis campylopoda]
Length = 577
Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/577 (84%), Positives = 529/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GL PYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLGPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL F+LTLCGSTLRAP SCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSFELTLCGSTLRAPRSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TP++F L +I SWL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCESHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL L+++G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNVLRVDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKT S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLGNALEGTEEQNVQFEIKTQLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576232|gb|ACN56809.1| phytochrome A [Brassica oleracea]
Length = 579
Score = 1004 bits (2596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/579 (84%), Positives = 532/579 (91%), Gaps = 6/579 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT++QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEE-EGD-----NTL 354
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGGEGDATAPDSTP 180
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
P+KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQT
Sbjct: 181 PRKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQT 240
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG+TP++F L +I SWL EY
Sbjct: 241 LLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFHLQEIASWLCEY 300
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
H DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+
Sbjct: 301 HTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHD 360
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKI ELTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKITELTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH LT VEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACAS
Sbjct: 481 EAIGKHLLTHVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
RDLH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 579
>gi|224576298|gb|ACN56842.1| phytochrome A [Hesperidanthus suffrutescens]
Length = 576
Score = 1004 bits (2595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/576 (84%), Positives = 529/576 (91%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPS SMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSRSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEV SE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVASEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQD+KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDDKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPL YACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLGYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDG+ALLYK+K+W+LG+TP++F L +I SWL E+H D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGSALLYKDKVWKLGITPSEFHLQEIASWLCEHHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D+ TK IH
Sbjct: 361 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVSTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRDL
Sbjct: 481 GKHLLTIVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSSADGGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVG CFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGECFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|89331143|emb|CAJ80938.1| phytochrome A [Melampyrum pratense]
Length = 605
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/615 (77%), Positives = 539/615 (87%), Gaps = 19/615 (3%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HR+T SLIIDFEPVKP+EVPMTAAGALQSYKLA+K+I RLQSLP GSMERL
Sbjct: 1 SGKPFYAIIHRLTASLIIDFEPVKPHEVPMTAAGALQSYKLASKSIARLQSLPGGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM QEVFELTGYDRVM YKFHEDDHGEV++EITK GLEPY+GLHYPATDIPQA+RFLF
Sbjct: 61 CETMAQEVFELTGYDRVMVYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQASRFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVR I DCRA HV+V+QDE LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRTICDCRANHVRVIQDENLPVDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEG--DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ E+ D++ KR+RLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAI+VNKELEL
Sbjct: 181 VNEGNEDAGPDDSSLDKRQRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAINVNKELEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+ EKNILRTQTLLCDML+RDAPLGIV+ SPN+MDLVKCDGA LL+KN+ RLG+TPN
Sbjct: 241 ENQMFEKNILRTQTLLCDMLLRDAPLGIVSHSPNVMDLVKCDGAILLHKNQKHRLGMTPN 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
D Q DIVSWL EYH DSTGLS DSLYDAG+ GAL LGDVVCGMAAVRIS +D +FWFRS
Sbjct: 301 DSQFRDIVSWLEEYHRDSTGLSTDSLYDAGFPGALDLGDVVCGMAAVRISDEDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TASE+RWGGA+HE E+DDG+KMHPRSSFKAFLEVVK+RSLPWKD+EMDAIHSLQ+ILR
Sbjct: 361 HTASEIRWGGARHESCERDDGQKMHPRSSFKAFLEVVKSRSLPWKDFEMDAIHSLQIILR 420
Query: 581 NAF-------KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVD 633
NA K+VG I ++L +L+I+G++ELEAVTSEMVRLIETA+VPI AVD
Sbjct: 421 NASSKETEERKEVGV------QIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVD 474
Query: 634 VDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEI 693
VDGLVNGWNTKIA+LTGL DKAIG HFL+LVE+SSI+ V +ML LAL G+EEQN+ FEI
Sbjct: 475 VDGLVNGWNTKIADLTGLPADKAIGMHFLSLVEESSIEAVSKMLELALDGKEEQNVHFEI 534
Query: 694 KTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
KTHG PI+LIVNACASRD+ +NVVGVCF+A DIT QK+VMD FTRIEGDY+AIVQ
Sbjct: 535 KTHGPS----PISLIVNACASRDVKENVVGVCFIAHDITTQKSVMDMFTRIEGDYRAIVQ 590
Query: 754 NPNPLIPPIFGSDEF 768
NPNP+IPPIFG+D F
Sbjct: 591 NPNPIIPPIFGTDVF 605
>gi|224576406|gb|ACN56896.1| phytochrome A [Smelowskia tibetica]
Length = 573
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/573 (84%), Positives = 526/573 (91%), Gaps = 4/573 (0%)
Query: 185 VKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKF 244
VKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKF
Sbjct: 1 VKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKF 60
Query: 245 HEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDE 304
HEDDHGEVVSE+TK GL+PYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +VLQDE
Sbjct: 61 HEDDHGEVVSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVLQDE 120
Query: 305 KLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQKRKR 360
KL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQKRKR
Sbjct: 121 KLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQKRKR 180
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLCDML
Sbjct: 181 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
MRDAPLGIVTQSPN+ DLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYHMDSTG
Sbjct: 241 MRDAPLGIVTQSPNVKDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMDSTG 300
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS DSL+DAG+ AL+LGD VCGMAAVRIS KD+IFWFRS TA EVRWGGAKH+PD++DD
Sbjct: 301 LSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDLIFWFRSHTAGEVRWGGAKHDPDDRDD 360
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD T D++TK IHSKL
Sbjct: 361 ARRMHPRSSFKAFLEVVKTRSTPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKVIHSKL 420
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+AIG+H
Sbjct: 421 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGRH 480
Query: 661 FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
TL EDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDLH+N
Sbjct: 481 LHTLAEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHEN 540
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
VVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 VVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 573
>gi|224576222|gb|ACN56804.1| phytochrome A [Baimashania pulvinata]
Length = 577
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/577 (84%), Positives = 528/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGL DSL DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLGTDSLLDAGFPRALALGDSVCGMAAVRISLKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVV+TRS+PWKDYEMDAIHS QLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVRTRSIPWKDYEMDAIHSSQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ LEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQGLEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EE N+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLENALEGTEELNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576368|gb|ACN56877.1| phytochrome A [Physaria floribunda]
Length = 577
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/577 (83%), Positives = 526/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFL MKNKVRM VDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLSMKNKVRMTVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
QDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+ + E D T PQ
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEGDGEEDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFL QVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLTQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TP+DF L D+ SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKMWKLGTTPSDFHLQDLASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLK++G++ELEAV+SEMVRLIETA VPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKVDGIQELEAVSSEMVRLIETAMVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSGADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
+++NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 VNENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|89331067|emb|CAJ80900.1| phytochrome A [Castilleja sp. JB-2006]
Length = 585
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/585 (80%), Positives = 529/585 (90%), Gaps = 3/585 (0%)
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
PYEVPMTAAGALQSYKLAAKAITRLQ+LPSGSME+LCDTM+QEVFELTGYDRVM YKFH+
Sbjct: 1 PYEVPMTAAGALQSYKLAAKAITRLQALPSGSMEQLCDTMVQEVFELTGYDRVMIYKFHD 60
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
DDHGEV+SE+TK GLEPY+GLHYPATDIPQAARFLF+KN+VRMI DCRA HVKV+QD+ L
Sbjct: 61 DDHGEVLSEVTKPGLEPYVGLHYPATDIPQAARFLFLKNEVRMICDCRANHVKVIQDDNL 120
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKRKRLWGL 364
PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VVVN+ E+G ++ P K+KRLWGL
Sbjct: 121 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGNEDGPDSSSHPDKKKRLWGL 180
Query: 365 VVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA 424
VVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q+LEKNILRTQTLLCDML+RDA
Sbjct: 181 VVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIELENQMLEKNILRTQTLLCDMLLRDA 240
Query: 425 PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSAD 484
PLGIV+QSPN+MD VKCDGA LLYK K +RLG TP+DFQ+ DIVSWL EYH +STGLS D
Sbjct: 241 PLGIVSQSPNVMDFVKCDGAILLYKTKNYRLGKTPSDFQIRDIVSWLDEYHHESTGLSTD 300
Query: 485 SLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKM 544
SLYDAG+ GALALGD VCGMAAVRI+ D +FWFRS TA+E+RWGG KHEP EKDDGRKM
Sbjct: 301 SLYDAGFPGALALGDAVCGMAAVRITNTDWLFWFRSHTAAEIRWGGGKHEPGEKDDGRKM 360
Query: 545 HPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF-KDVGTLDLDTKSIHSKLCDL 603
HPR SFKAFLEVVKTRSLPWKD+EMDAIHSLQLILRNA K+ +D+D K IH++L DL
Sbjct: 361 HPRLSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNASNKEAADMDVDGKEIHARLNDL 420
Query: 604 KIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT 663
+++G+KELEAVTSEMVRLIETA+VPI AVD+DGLVNGWNTKIA+LTGL VDKAIG+HFL
Sbjct: 421 QLDGIKELEAVTSEMVRLIETASVPIFAVDMDGLVNGWNTKIADLTGLPVDKAIGRHFLG 480
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LVEDSS + V +ML LALQG EEQN+QFEIKTHG + PI+LIVNACAS D+ +NVVG
Sbjct: 481 LVEDSSAEAVNKMLELALQGNEEQNVQFEIKTHGLRSESGPISLIVNACASWDVKENVVG 540
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
VCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN LIPPIFG+DEF
Sbjct: 541 VCFIAQDITIQKSMMDKFTRIEGDYRAIVQNPNQLIPPIFGTDEF 585
>gi|226234977|dbj|BAH47478.1| phytochrome E [Cardamine nipponica]
gi|226235027|dbj|BAH47479.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/1064 (49%), Positives = 690/1064 (64%), Gaps = 50/1064 (4%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
SSS A + G S+ AQ ++DA L ADF+ S G SF+YS SV
Sbjct: 5 SSSSAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVI------SP 58
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-- 116
SD TAYL +IQ+G L+QPFGCL+A++E +F+++ SEN E L +++ S
Sbjct: 59 HNHVSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQC 118
Query: 117 VGDHPVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
+ V G IG D +T+F+ S ++L KA F E+SLLNP+LVH KT+ KPFYAI+HR+
Sbjct: 119 AEFNNVKGLIGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRID 178
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID E K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V LTG
Sbjct: 179 AGIVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTG 238
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A
Sbjct: 239 YDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNA 298
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP 355
VKV+Q E+L L L STLRAPHSCH QYM NM SIASL +A+VV ++
Sbjct: 299 TSVKVVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDS------- 351
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQTL
Sbjct: 352 ---SKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTL 408
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTP++ Q+ D+V+WL E H
Sbjct: 409 LCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENH 468
Query: 476 M-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
DSTGL+ DSL DAGY GA++ GD +CG+AA IS KD + WFRS TAS ++WGGAKH
Sbjct: 469 GDDSTGLTTDSLVDAGYPGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHH 528
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P KDD +MHPRSSFKAFLE+ K+RSLPW+ E+DAIHSL+LI+R +F T
Sbjct: 529 PKNKDDAGRMHPRSSFKAFLEIAKSRSLPWEISEIDAIHSLRLIMRESF---------TS 579
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
S ++ EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 580 SRPVLSANVVERDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQAS 639
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDD---PITLIVN 710
+A+GK +V++ S ++ ++ ALQG+EE+N+ +++ G + D + ++VN
Sbjct: 640 EAMGKSLANEIVQEESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVN 699
Query: 711 ACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGW 770
+C SRD + ++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 700 SCTSRDYTEKIIGVCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHAC 759
Query: 771 CCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD- 829
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++ D
Sbjct: 760 CSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIASHDI 816
Query: 830 PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTA 889
PE GFF + GKY E L NK + EG V G F FLQ+ S + L L E
Sbjct: 817 PESSLVGFFNKEGKYIEASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA- 873
Query: 890 LKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDL 949
+ L L Y K++I+NPLSGI F+ K++E +E+ Q++ L TS C++Q+ I++ +DL
Sbjct: 874 -QSLNELTYMKQEIKNPLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDL 932
Query: 950 DSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
SI +G L LE EF L ++L + ISQVM+ + ++ E E+I + LYGD ++LQ
Sbjct: 933 KSIEEGNLKLETEEFRLEDILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQ 992
Query: 1010 QVLADFLSISINFVPN-----GGQLMVSSSLTKDQLGQSVHLAY 1048
+LAD L +N P G + L +D G+ +HL +
Sbjct: 993 LILADLLCNIVNHAPFPDSWVGINISPGHELARDN-GRYIHLQF 1035
>gi|226234971|dbj|BAH47475.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1002 bits (2590), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/1064 (49%), Positives = 691/1064 (64%), Gaps = 50/1064 (4%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
SSS A + G S+ AQ ++DA L ADF+ S G SF+YS SV
Sbjct: 5 SSSSAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVI------SP 58
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-- 116
SD TAYL +IQ+G L+QPFGCL+A++E +F+++ SEN E L +++ S
Sbjct: 59 HNHVSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQC 118
Query: 117 VGDHPVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
+ V G IG D +T+F+ S ++L KA F E+SLLNP+LVH KT+ KPFYAI+HR+
Sbjct: 119 AEFNNVKGLIGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRID 178
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID E K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V LTG
Sbjct: 179 AGIVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTG 238
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A
Sbjct: 239 YDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNA 298
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP 355
VKV+Q E+L L L STLRAPHSCH QYM NM SIASL +A+VV ++
Sbjct: 299 TPVKVVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDS------- 351
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQTL
Sbjct: 352 ---SKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTL 408
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTP++ Q+ D+V+WL E H
Sbjct: 409 LCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENH 468
Query: 476 M-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
DSTGL+ DSL DAGY GA++ GD +CG+AA IS KD + WFRS TAS ++WGGAKH
Sbjct: 469 GDDSTGLTTDSLVDAGYPGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHH 528
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P KDD +MHPRSSFKAFLE+ K+RSLPW+ E+DAIHSL+LI+R +F T
Sbjct: 529 PKNKDDAGRMHPRSSFKAFLEIAKSRSLPWEISEIDAIHSLRLIMRESF---------TS 579
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
S ++ EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 580 SRPVLSANVVERDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQAS 639
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDD---PITLIVN 710
+A+GK +V++ S ++ ++ ALQG+EE+N+ +++ G + D + ++VN
Sbjct: 640 EAMGKSLANEIVQEESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVN 699
Query: 711 ACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGW 770
+C SRD + ++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 700 SCTSRDYTEKIIGVCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHAC 759
Query: 771 CCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD- 829
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++ D
Sbjct: 760 CSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIASHDI 816
Query: 830 PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTA 889
PE GFF + GKY E L NK + EG V G F FLQ+ S + L L E
Sbjct: 817 PESSLVGFFNKEGKYIEASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA- 873
Query: 890 LKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDL 949
+ L L+Y K++I+NPLSGI F+ K++E +E+ Q++ L TS C++Q+ I++ +DL
Sbjct: 874 -QSLNELSYMKQEIKNPLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDL 932
Query: 950 DSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
SI +G L LE EF L ++L + ISQVM+ + ++ E E+I + LYGD ++LQ
Sbjct: 933 KSIEEGNLKLETEEFRLEDILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQ 992
Query: 1010 QVLADFLSISINFVPN-----GGQLMVSSSLTKDQLGQSVHLAY 1048
+LAD L +N P G + L +D G+ +HL +
Sbjct: 993 LILADLLCNIVNHAPFPDSWVGINISPGHELARDN-GRYIHLQF 1035
>gi|226234973|dbj|BAH47476.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/1064 (48%), Positives = 691/1064 (64%), Gaps = 50/1064 (4%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
SSS A + G S+ AQ ++DA L ADF+ S G SF+YS SV
Sbjct: 5 SSSSAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVI------SP 58
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPE---LLTMVNHAVP 115
SD TAYL +IQ+G L+QPFGCL+A++E +F+++ SEN E LL++ + +
Sbjct: 59 HNHVSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQC 118
Query: 116 SVGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
+ D+ IG D +T+F+ S ++L KA F E+SLLNP+LVH KT+ KPFYAI+HR+
Sbjct: 119 AEFDNVKGLIGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRID 178
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID E K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V LTG
Sbjct: 179 AGIVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTG 238
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A
Sbjct: 239 YDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNA 298
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP 355
VKV+Q E+L L L STLRAPHSCH QYM NM SIASL +A+VV ++
Sbjct: 299 TPVKVVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDS------- 351
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQTL
Sbjct: 352 ---SKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTL 408
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTP++ Q+ D+V+WL E H
Sbjct: 409 LCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENH 468
Query: 476 M-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
DSTGL+ DSL DAGY GA++ GD +CG+AA IS KD + WFRS TAS ++WGGAKH
Sbjct: 469 GDDSTGLTTDSLVDAGYPGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHH 528
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P KDD +MHPRSSFKAFLE+ K+RSLPW+ E+DAIHSL+LI+R +F T
Sbjct: 529 PKNKDDAGRMHPRSSFKAFLEIAKSRSLPWEISEIDAIHSLRLIMRESF---------TS 579
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
S ++ EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 580 SRPVLSANVVERDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQAS 639
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDD---PITLIVN 710
+A+GK +V++ S ++ ++ ALQG+EE+N+ +++ G + D + ++VN
Sbjct: 640 EAMGKSLANEIVQEESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVN 699
Query: 711 ACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGW 770
+C SRD + ++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 700 SCTSRDYTEKIIGVCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHAC 759
Query: 771 CCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD- 829
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++ D
Sbjct: 760 CSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIASHDI 816
Query: 830 PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTA 889
PE GFF + GKY E L NK + EG V G F FLQ+ S + L L E
Sbjct: 817 PESSLVGFFNKEGKYIEASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA- 873
Query: 890 LKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDL 949
+ L L Y K++I+NPLSGI F+ K++E +E+ Q++ L TS C++Q+ I++ +DL
Sbjct: 874 -QSLNELTYMKQEIKNPLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDL 932
Query: 950 DSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
SI +G L LE EF L ++L + ISQVM+ + ++ E E+I + LYGD ++LQ
Sbjct: 933 KSIEEGNLKLETEEFRLEDILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQ 992
Query: 1010 QVLADFLSISINFVPN-----GGQLMVSSSLTKDQLGQSVHLAY 1048
+LAD L +N P G + L +D G+ +HL +
Sbjct: 993 LILADLLCNIVNHAPFPDSWVGINISPGHELARDN-GRYIHLQF 1035
>gi|226235029|dbj|BAH47480.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/1064 (49%), Positives = 690/1064 (64%), Gaps = 50/1064 (4%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
SSS A + G S+ AQ ++DA L ADF+ S G SF+YS SV
Sbjct: 5 SSSSAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVI------SP 58
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-- 116
SD TAYL +IQ+G L+QPFGCL+A++E +F+++ SEN E L +++ S
Sbjct: 59 HNHVSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQC 118
Query: 117 VGDHPVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
+ V G IG D +T+F+ S ++L KA F E+SLLNP+LVH KT+ KPFYAI+HR+
Sbjct: 119 AEFNNVKGLIGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRID 178
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID E K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V LTG
Sbjct: 179 AGIVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTG 238
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A
Sbjct: 239 YDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNA 298
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP 355
VKV+Q E+L L L STLRAPHSCH QYM NM SIASL +A+VV ++
Sbjct: 299 TPVKVVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDS------- 351
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQTL
Sbjct: 352 ---SKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTL 408
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTP++ Q+ D+V+WL E H
Sbjct: 409 LCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENH 468
Query: 476 M-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
DSTGL+ DSL DAGY GA++ GD +CG+AA IS KD + WFRS TAS ++WGGAKH
Sbjct: 469 GDDSTGLTTDSLVDAGYPGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHH 528
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P KDD +MHPRSSFKAFLE+ K+RSLPW+ E+DAIHSL+LI+R +F T
Sbjct: 529 PKNKDDAGRMHPRSSFKAFLEIAKSRSLPWEISEIDAIHSLRLIMRESF---------TS 579
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
S ++ EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 580 SRPVLSANVVERDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQAS 639
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDD---PITLIVN 710
+A+GK +V++ S ++ ++ ALQG+EE+N+ +++ G + D + ++VN
Sbjct: 640 EAMGKSLANEIVQEESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVN 699
Query: 711 ACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGW 770
+C SRD + ++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 700 SCTSRDYTEKIIGVCFVGQDITSEKEITDRFMRLQGDYKTIVQSLNPLIPPIFASDEHAC 759
Query: 771 CCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD- 829
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++ D
Sbjct: 760 CSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIASHDI 816
Query: 830 PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTA 889
PE GFF + GKY E L NK + EG V G F FLQ+ S + L L E
Sbjct: 817 PESSLVGFFNKEGKYIEASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA- 873
Query: 890 LKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDL 949
+ L L Y K++I+NPLSGI F+ K++E +E+ Q++ L TS C++Q+ I++ +DL
Sbjct: 874 -QSLNELTYMKQEIKNPLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDL 932
Query: 950 DSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
SI +G L LE EF L ++L + ISQVM+ + ++ E E+I + LYGD ++LQ
Sbjct: 933 KSIEEGNLKLETEEFRLEDILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQ 992
Query: 1010 QVLADFLSISINFVPN-----GGQLMVSSSLTKDQLGQSVHLAY 1048
+LAD L +N P G + L +D G+ +HL +
Sbjct: 993 LILADLLCNIVNHAPFPDSWVGINISPGHELARDN-GRYIHLQF 1035
>gi|224576350|gb|ACN56868.1| phytochrome A [Neuontobotrys frutescens]
Length = 576
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/576 (84%), Positives = 527/576 (91%), Gaps = 3/576 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVM VVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMGVVVNEEDGEGDAPDSTTPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLY+ K+W+LG+TP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYRYKVWKLGITPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DD R+MH RSSFKAFLEVVKT SLPWKDYEM+AIHSLQLILRNAFKD T D +TK IH
Sbjct: 361 RDDARRMHTRSSFKAFLEVVKTGSLPWKDYEMNAIHSLQLILRNAFKDGETTDANTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEA+TSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAMTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LT+VE SS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNAC SRDL
Sbjct: 481 GKHLLTIVEGSSVEIVKRMLENALEGTEEQNVQFEIKTHLSSADAGPISLVVNACTSRDL 540
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
H+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 576
>gi|226234975|dbj|BAH47477.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/1064 (48%), Positives = 690/1064 (64%), Gaps = 50/1064 (4%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
SSS A + G S+ AQ ++DA L ADF+ S G SF+YS SV
Sbjct: 5 SSSSAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVI------SP 58
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-- 116
SD TAYL +IQ+G L+QPFGCL+A++E +F+++ SEN E L +++ S
Sbjct: 59 HNHVSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQC 118
Query: 117 VGDHPVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
+ V G IG D +T+F+ S ++L KA F E+SLLNP+LVH KT+ KPFYAI+HR+
Sbjct: 119 AEFNNVKGLIGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRID 178
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID E K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V LTG
Sbjct: 179 AGIVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTG 238
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A
Sbjct: 239 YDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNA 298
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP 355
VKV+Q E+L L L STLRAPHSCH QYM NM SIASL +A+VV ++
Sbjct: 299 TSVKVVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDS------- 351
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQTL
Sbjct: 352 ---SKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTL 408
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTP++ Q+ D+V+WL E H
Sbjct: 409 LCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENH 468
Query: 476 M-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
DSTGL+ DSL DAGY GA++ GD +CG+AA IS KD + WFRS TAS ++WGGAKH
Sbjct: 469 GDDSTGLTTDSLVDAGYPGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHH 528
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P KDD +MHPRSSFKAFLE+ K+RSLPW+ E+DAIHSL+LI+R +F T
Sbjct: 529 PKNKDDAGRMHPRSSFKAFLEIAKSRSLPWEISEIDAIHSLRLIMRESF---------TS 579
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
S ++ EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 580 SRPVLSANVVERDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQAS 639
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDD---PITLIVN 710
+A+GK +V++ S ++ ++ ALQG+EE+N+ +++ G + D + ++VN
Sbjct: 640 EAMGKSLANEIVQEESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVN 699
Query: 711 ACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGW 770
+C SRD + ++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 700 SCTSRDYTEKIIGVCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHAC 759
Query: 771 CCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD- 829
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++ D
Sbjct: 760 CSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIASHDI 816
Query: 830 PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTA 889
PE GFF + GKY E L NK + EG V G F FLQ+ S + L L E +
Sbjct: 817 PESSLVGFFNKEGKYIEASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKE--S 872
Query: 890 LKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDL 949
+ L L Y K++I+NPLSGI F+ K++E +E+ Q++ L TS C++Q+ I++ +DL
Sbjct: 873 AQSLNELTYMKQEIKNPLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDL 932
Query: 950 DSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
SI +G L LE EF L ++L + ISQVM+ + ++ E E+I + YGD ++LQ
Sbjct: 933 KSIEEGNLKLETEEFRLEDILDSIISQVMIMLKERNSQLRVEVTEEIKTLPFYGDRVKLQ 992
Query: 1010 QVLADFLSISINFVPN-----GGQLMVSSSLTKDQLGQSVHLAY 1048
+LAD L +N P G + L +D G+ +HL +
Sbjct: 993 LILADLLCNIVNHAPFPDSWVGINISPGHELARDN-GRYIHLQF 1035
>gi|226235031|dbj|BAH47481.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 1001 bits (2587), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/1064 (49%), Positives = 690/1064 (64%), Gaps = 50/1064 (4%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
SSS A + G S+ AQ ++DA L ADF+ S G SF+YS SV
Sbjct: 5 SSSSAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVI------SP 58
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-- 116
SD TAYL +IQ+G L+QPFGCL+A++E +F+++ SEN E L +++ S
Sbjct: 59 HNHVSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQC 118
Query: 117 VGDHPVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
+ V G IG D +T+F+ S ++L KA F E SLLNP+LVH KT+ KPFYAI+HR+
Sbjct: 119 AEFNNVKGLIGIDARTLFSPSSGASLSKAASFTENSLLNPVLVHSKTTQKPFYAILHRID 178
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID E K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V LTG
Sbjct: 179 AGIVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTG 238
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A
Sbjct: 239 YDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNA 298
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP 355
VKV+Q E+L L L STLRAPHSCH QYM NM SIASL +A+VV ++
Sbjct: 299 TPVKVVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDS------- 351
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQTL
Sbjct: 352 ---SKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTL 408
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTP++ Q+ D+V+WL E H
Sbjct: 409 LCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENH 468
Query: 476 M-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
DSTGL+ DSL DAGY GA++ GD +CG+AA IS KD + WFRS TAS ++WGGAKH
Sbjct: 469 GDDSTGLTTDSLVDAGYPGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHH 528
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P KDD +MHPRSSFKAFLE+ K+RSLPW+ E+DAIHSL+LI+R +F T
Sbjct: 529 PKNKDDAGRMHPRSSFKAFLEIAKSRSLPWEISEIDAIHSLRLIMRESF---------TS 579
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
S ++ EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 580 SRPVLSANVVERDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQAS 639
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDD---PITLIVN 710
+A+GK +V++ S ++ ++ ALQG+EE+N+ +++ G + D + ++VN
Sbjct: 640 EAMGKSLANEIVQEESRAALESLMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVN 699
Query: 711 ACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGW 770
+C SRD + ++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 700 SCTSRDYTEKIIGVCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHAC 759
Query: 771 CCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD- 829
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++ D
Sbjct: 760 CSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIASHDI 816
Query: 830 PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTA 889
PE GFF + GKY E L NK + EG V G F FLQ+ S + L L E
Sbjct: 817 PESSLVGFFNKEGKYIEASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA- 873
Query: 890 LKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDL 949
+ L L+Y K++I+NPLSGI F+ K++E +E+ Q++ L TS C++Q+ I++ +DL
Sbjct: 874 -QSLNELSYMKQEIKNPLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGTDL 932
Query: 950 DSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
SI +G L LE EF L ++L + ISQVM+ + ++ E E+I + LYGD ++LQ
Sbjct: 933 KSIEEGNLKLETEEFRLEDILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQ 992
Query: 1010 QVLADFLSISINFVPN-----GGQLMVSSSLTKDQLGQSVHLAY 1048
+LAD L +N P G + L +D G+ +HL +
Sbjct: 993 LILADLLCNIVNHAPFPDSWVGINISPGHELARDN-GRYIHLQF 1035
>gi|89331119|emb|CAJ80926.1| phytochrome A [Lamourouxia rhinanthifolia]
Length = 590
Score = 1000 bits (2586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/591 (79%), Positives = 533/591 (90%), Gaps = 4/591 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEP KPYEV MTAAGALQSYKLAAKAIT LQ+LPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPAKPYEVSMTAAGALQSYKLAAKAITHLQALPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
YKFH+DDHGEV+SE+TKSGL+PY+GL YPATDIPQAARFLF+KNKVRMI DCRA HVKV
Sbjct: 61 IYKFHDDDHGEVLSEMTKSGLDPYVGLRYPATDIPQAARFLFIKNKVRMICDCRANHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKR 358
+QDE LPFDLTLCGST RAPHSCHLQYMENMNSIASLVM+VVVN+ E+G ++ P +
Sbjct: 121 IQDENLPFDLTLCGSTPRAPHSCHLQYMENMNSIASLVMSVVVNEGNEDGPDSSSHPDNK 180
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q+LEKNILRTQTLLCD
Sbjct: 181 KRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIELENQMLEKNILRTQTLLCD 240
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
ML+RDAPLGI++ SPN+MDLVKCDGA L+YK K +RLG+TP+DFQ+ DIVSWL EYH DS
Sbjct: 241 MLLRDAPLGIIS-SPNVMDLVKCDGAVLIYKTKKYRLGMTPSDFQIRDIVSWLDEYHRDS 299
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSLYDAG+ GALALGD VCGMAAVRI+ D +FWFRS TA+E+RWGGAKHE EK
Sbjct: 300 TGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHELGEK 359
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF-KDVGTLDLDTKSIH 597
DDG+KMHPR SFKAFLE+VKTRSLPWKD+EMDAIHSLQLILRNA K+ D+D K IH
Sbjct: 360 DDGQKMHPRLSFKAFLEIVKTRSLPWKDFEMDAIHSLQLILRNASNKEAEERDVDGKEIH 419
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
++L DL+++G++ELEAVTSEMVRLIETA+VPI AVDVDGLVNGWNTKIA+LTGL VDKAI
Sbjct: 420 ARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLPVDKAI 479
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
G+HFL+LVEDSS + V +ML LALQG EE+N+QFEIKTHGS+ PI+LIVNACAS+D+
Sbjct: 480 GRHFLSLVEDSSAEAVNKMLELALQGNEERNVQFEIKTHGSRSESGPISLIVNACASQDV 539
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
+NVVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN LIPPIFG+DEF
Sbjct: 540 KENVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNQLIPPIFGTDEF 590
>gi|89331159|emb|CAJ80946.1| phytochrome A [Orobanche californica]
Length = 608
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/593 (78%), Positives = 529/593 (89%), Gaps = 2/593 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSLIIDFEPV P+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS++RL
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVNPHEVPMTAAGALQSYKLAAKAITRLQALPSGSVKRL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV SEITK LEPY+GLHYPATDIPQA RFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMVYKFHDDDHGEVFSEITKPFLEPYVGLHYPATDIPQATRFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DC+A HVKV+QD+ LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCQANHVKVVQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ +E+G ++ P KR+RLWGLVVCHNT+PRFVPFPLRYACEFLAQVFA+HV KELE
Sbjct: 181 VNEGDEDGPDSSSGPNKRERLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAVHVTKELEW 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCD+L+R+ PLGIV+ SPN+MDLV+CDGA LL+KN +RLG+TP
Sbjct: 241 ENQLLEKNILRTQTLLCDLLLRNTPLGIVSGSPNVMDLVRCDGAVLLHKNTKYRLGLTPT 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALG+ VCGM A R++ KD +FWFRS
Sbjct: 301 DFQIQDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGNAVCGMTAARVTDKDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA EVRW GAKHEP EKDDGRKMHPRSSFKAFLEVVKTRSLPW+DYEMDAIHSLQLILR
Sbjct: 361 HTAGEVRWSGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWRDYEMDAIHSLQLILR 420
Query: 581 NAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNG 640
NA ++ L+ + I ++L L+I+G+KE+EAVTSEMVRLIETA+VPI AVD+DGLVNG
Sbjct: 421 NASRENDEKALEGREIQARLNVLQIDGVKEIEAVTSEMVRLIETASVPIFAVDLDGLVNG 480
Query: 641 WNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKI 700
WNTKIA+LTGL VD+AIG HFL LVEDSS DTV +ML LALQG+EEQN+QFEIKTHG +
Sbjct: 481 WNTKIADLTGLGVDEAIGSHFLALVEDSSADTVSKMLELALQGKEEQNVQFEIKTHGQRS 540
Query: 701 NDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
PITLIVNACASRD+ +NVVGVCF+A DIT QK++MDKFTRIEGDY++I+Q
Sbjct: 541 ESGPITLIVNACASRDVQENVVGVCFIAHDITTQKSMMDKFTRIEGDYRSIIQ 593
>gi|226234965|dbj|BAH47472.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/1066 (48%), Positives = 689/1066 (64%), Gaps = 54/1066 (5%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
SSS A + G S+ AQ ++DA L ADF+ S G SF+YS SV
Sbjct: 5 SSSSAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVI------SP 58
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-- 116
SD TAYL +IQ+G L+QPFGCL+A++E +F+++ SEN E L +++ S
Sbjct: 59 HNHVSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQC 118
Query: 117 VGDHPVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
+ V G IG D +T+F+ S ++L KA F E+SLLNP+LVH KT+ KPFYAI+HR+
Sbjct: 119 AEFNNVKGLIGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRID 178
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID E K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V LTG
Sbjct: 179 AGIVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTG 238
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A
Sbjct: 239 YDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNA 298
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP 355
VK++Q E+L L L STLRAPHSCH QYM NM SIASL +A+VV ++
Sbjct: 299 TPVKIVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDS------- 351
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQTL
Sbjct: 352 ---SKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTL 408
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTP++ Q+ D+V+WL E H
Sbjct: 409 LCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENH 468
Query: 476 M-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
DSTGL+ DSL D GY GA++ GD +CG+AA IS KD + WFRS TAS ++WGGAKH
Sbjct: 469 GDDSTGLTTDSLVDVGYPGAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHH 528
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P KDD +MHPRSSFKAFLEV K+RSLPW+ E+DAIHSL+LI+R +F T
Sbjct: 529 PKNKDDAGRMHPRSSFKAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF---------TS 579
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
S ++ EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 580 SRPVLSANVVERDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQAS 639
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDP-----ITLI 708
+A+GK +V++ S ++ ++ ALQG+EE+N+ +++ G N+ P + ++
Sbjct: 640 EAMGKSLANEIVQEESRAALESLMCKALQGEEEKNVMLKLRKFGH--NNHPYYSSGVFVL 697
Query: 709 VNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
VN+C SRD + ++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 698 VNSCTSRDYTEKIIGVCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEN 757
Query: 769 GWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ 828
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++
Sbjct: 758 ACCSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIASH 814
Query: 829 D-PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
D PE GFF + GKY E L NK + EG V G F FLQ+ S + L L E
Sbjct: 815 DIPESSLLGFFNKEGKYIEASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES 872
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ L L Y K++I+NPLSGI F+ K++E +E+ Q++ L TS C++Q+ I++ +
Sbjct: 873 A--QSLNELTYMKQEIKNPLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGT 930
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL SI +G L LE EF L +L + ISQVM+ + ++ E E+I + LYGD ++
Sbjct: 931 DLKSIEEGNLKLETEEFRLEYILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVK 990
Query: 1008 LQQVLADFLSISINFVPN-----GGQLMVSSSLTKDQLGQSVHLAY 1048
LQ +LAD L +N P G + L +D G+ +HL +
Sbjct: 991 LQLILADLLCNIVNHAPFPDSWVGINISPGHELARDN-GRYIHLQF 1035
>gi|226234981|dbj|BAH47471.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/1066 (48%), Positives = 689/1066 (64%), Gaps = 54/1066 (5%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
SSS A + G S+ AQ ++DA L ADF+ S G SF+YS SV
Sbjct: 5 SSSSAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVI------SP 58
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-- 116
SD TAYL +IQ+G L+QPFGCL+A++E +F+++ SEN E L +++ S
Sbjct: 59 HNHVSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQC 118
Query: 117 VGDHPVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
+ V G IG D +T+F+ S ++L KA F E+SLLNP+LVH KT+ KPFYAI+HR+
Sbjct: 119 AEFNNVKGLIGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRID 178
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID E K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V LTG
Sbjct: 179 AGIVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTG 238
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A
Sbjct: 239 YDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNA 298
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP 355
VK++Q E+L L L STLRAPHSCH QYM NM SIASL +A+VV ++
Sbjct: 299 TPVKIVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDS------- 351
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQTL
Sbjct: 352 ---SKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTL 408
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTP++ Q+ D+V+WL E H
Sbjct: 409 LCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENH 468
Query: 476 M-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
DSTGL+ DSL D GY GA++ GD +CG+AA IS KD + WFRS TAS ++WGGAKH
Sbjct: 469 GDDSTGLTTDSLVDVGYPGAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHH 528
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P KDD +MHPRSSFKAFLEV K+RSLPW+ E+DAIHSL+LI+R +F T
Sbjct: 529 PKNKDDAGRMHPRSSFKAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF---------TS 579
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
S ++ EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 580 SRPVLSANVVERDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQAS 639
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDP-----ITLI 708
+A+GK +V++ S ++ ++ ALQG+EE+N+ +++ G N+ P + ++
Sbjct: 640 EAMGKSLANEIVQEESRAALESLMCKALQGEEEKNVMLKLRKFGH--NNHPYYSSGVFVL 697
Query: 709 VNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
VN+C SRD + ++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 698 VNSCTSRDYTEKIIGVCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEN 757
Query: 769 GWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ 828
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++
Sbjct: 758 ACCSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIASH 814
Query: 829 D-PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
D PE GFF + GKY E L NK + EG V G F FLQ+ S + L L E
Sbjct: 815 DIPESSLLGFFNKEGKYIEASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES 872
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ L L Y K++I+NPLSGI F+ K++E +E+ Q++ L TS C++Q+ I++ +
Sbjct: 873 A--QSLNELTYMKQEIKNPLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGA 930
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL SI +G L LE EF L +L + ISQVM+ + ++ E E+I + LYGD ++
Sbjct: 931 DLKSIEEGNLKLETEEFRLEYILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVK 990
Query: 1008 LQQVLADFLSISINFVPN-----GGQLMVSSSLTKDQLGQSVHLAY 1048
LQ +LAD L +N P G + L +D G+ +HL +
Sbjct: 991 LQLILADLLCNIVNHAPFPDSWVGINISPGHELARDN-GRYIHLQF 1035
>gi|226235033|dbj|BAH47482.1| phytochrome E [Cardamine resedifolia]
Length = 1116
Score = 996 bits (2576), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/1064 (48%), Positives = 686/1064 (64%), Gaps = 50/1064 (4%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
SSS A + G S+ AQ ++DA L ADF+ S G SF+YS SV
Sbjct: 5 SSSSAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVI------SP 58
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-- 116
SD TAYL +IQ+G L+QPFGCL+A++E +F+++ SEN E L +++ S
Sbjct: 59 HNHVSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQC 118
Query: 117 VGDHPVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
+ V G IG D +T+F+ S ++L KA F E+SLLNP+LVH KT+ KPFYAI+HR+
Sbjct: 119 AEFNNVKGLIGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRID 178
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
+ID E K + +T AGA+QS KLA +AI+RLQSLP G + LCD ++++V LTG
Sbjct: 179 AGTVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDAVVEDVQRLTG 238
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A
Sbjct: 239 YDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNA 298
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP 355
VKV+Q E+L L L STLRAPHSCH QYM NM SIASL +A+VV ++
Sbjct: 299 TPVKVVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDS------- 351
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQTL
Sbjct: 352 ---SKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTL 408
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTP++ Q+ D+V+WL E H
Sbjct: 409 LCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENH 468
Query: 476 M-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
DSTGL+ DSL DAGY GA++ GD +CG+AA IS KD + WFRS TAS ++WGGAKH
Sbjct: 469 GDDSTGLTTDSLVDAGYPGAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHH 528
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P KDD +MHPRSSFKAFLEV K+RSLPW+ E+DAIHSL+LI+R +F T
Sbjct: 529 PKNKDDAGRMHPRSSFKAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF---------TS 579
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
S ++ EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 580 SRPVLSANVVERDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQAS 639
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDD---PITLIVN 710
+A+GK +V++ S ++ + ALQG+EE+N+ +++ G + D + ++VN
Sbjct: 640 EAMGKSLANEIVQEESRAALESFMCKALQGEEEKNVMLKLRKFGHNNHPDYSSGVCVLVN 699
Query: 711 ACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGW 770
+C SRD + ++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 700 SCTSRDYTEKIIGVCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEHAC 759
Query: 771 CCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD- 829
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++ D
Sbjct: 760 CSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIASHDI 816
Query: 830 PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTA 889
PE GFF + GKY E L NK + EG V G F FLQ+ S + L L E
Sbjct: 817 PESSLVGFFNKEGKYIEASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKESA- 873
Query: 890 LKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDL 949
+ L L Y K++I+NPLSGI F+ K++E +E+ Q++ L +S C++Q+ I++ +DL
Sbjct: 874 -QSLNGLTYIKQEIKNPLSGIRFAHKLLESSEISETQRKFLESSDACEKQITTIIEGTDL 932
Query: 950 DSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
SI +G L LE EF L +L + ISQVM+ + ++ E E+I + LYGD ++LQ
Sbjct: 933 KSIEEGNLKLETEEFRLENILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVKLQ 992
Query: 1010 QVLADFLSISINFVPN-----GGQLMVSSSLTKDQLGQSVHLAY 1048
+LAD L +N P G + L +D G+ +HL +
Sbjct: 993 LILADLLCNIVNHAPFPDSWVGINISPGHELARDN-GRYIHLQF 1035
>gi|224576258|gb|ACN56822.1| phytochrome A [Clypeola aspera]
Length = 577
Score = 996 bits (2575), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/577 (83%), Positives = 526/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSG MERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGGMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIV A+HV V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVGRNAKHVGV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL +LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEKLSSELTLCGSTLRAPHSCHLQYMPNMDSIASLVMAVVVNEEDGEGDASDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TP+++ L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEYHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LG VCGMAAVRISPKDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGGSVCGMAAVRISPKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T ++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTVVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLK++G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKLDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ V RML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHFLTLVEDSSVEIVNRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMD FTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDNFTRIEGDYKAIIQ 577
>gi|226234969|dbj|BAH47474.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 995 bits (2572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/1066 (48%), Positives = 688/1066 (64%), Gaps = 54/1066 (5%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
SSS A + G S+ AQ ++DA L ADF+ S G SF+YS SV
Sbjct: 5 SSSSAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVI------SP 58
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-- 116
SD TAYL +IQ+G L+QPFGCL+A++E +F+++ SEN E L +++ S
Sbjct: 59 HNHVSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQC 118
Query: 117 VGDHPVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
+ V G IG D +T+F+ S ++L KA F E+SLLNP+LVH KT+ KPFYAI+HR+
Sbjct: 119 AEFNNVKGLIGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRID 178
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID E K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V LTG
Sbjct: 179 AGIVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTG 238
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A
Sbjct: 239 YDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNA 298
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP 355
VK++Q E+L L L STLRAPHSCH QYM NM SIASL +A+VV ++
Sbjct: 299 TPVKIVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDS------- 351
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQTL
Sbjct: 352 ---SKLWGLVVGHHCSPRYVPFPLRYACEFLIQAFGLQLQMELQLTSQLAEKKAMRTQTL 408
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTP++ Q+ D+V+WL E H
Sbjct: 409 LCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENH 468
Query: 476 M-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
DSTGL+ DSL D GY GA++ GD +CG+AA IS KD + WFRS TAS ++WGGAKH
Sbjct: 469 GDDSTGLTTDSLVDVGYPGAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHH 528
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P KDD +MHPRSSFKAFLEV K+RSLPW+ E+DAIHSL+LI+R +F T
Sbjct: 529 PKNKDDAGRMHPRSSFKAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF---------TS 579
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
S ++ EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 580 SRPVLSANVVERDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQAS 639
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDP-----ITLI 708
+A+GK +V++ S ++ ++ ALQG+EE+N+ +++ G N+ P + ++
Sbjct: 640 EAMGKSLANEIVQEESRAALESLMCKALQGEEEKNVMLKLRKFGH--NNHPYYSSGVFVL 697
Query: 709 VNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
VN+C SRD + ++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 698 VNSCTSRDYTEKIIGVCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEN 757
Query: 769 GWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ 828
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++
Sbjct: 758 ACCSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIASH 814
Query: 829 D-PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
D PE GFF + GKY L NK + EG V G F FLQ+ S + L L E
Sbjct: 815 DIPESSLLGFFNKEGKYIVASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES 872
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ L L Y K++I+NPLSGI F+ K++E +E+ Q++ L TS C++Q+ I++ +
Sbjct: 873 A--QSLNELTYMKQEIKNPLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGT 930
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL SI +G L LE EF L +L + ISQVM+ + ++ E E+I + LYGD ++
Sbjct: 931 DLKSIEEGNLKLETEEFRLEYILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVK 990
Query: 1008 LQQVLADFLSISINFVPN-----GGQLMVSSSLTKDQLGQSVHLAY 1048
LQ +LAD L +N P G + L +D G+ +HL +
Sbjct: 991 LQLILADLLCNIVNHAPFPDSWVGINISPGHELARDN-GRYIHLQF 1035
>gi|297800250|ref|XP_002868009.1| hypothetical protein ARALYDRAFT_914880 [Arabidopsis lyrata subsp.
lyrata]
gi|297313845|gb|EFH44268.1| hypothetical protein ARALYDRAFT_914880 [Arabidopsis lyrata subsp.
lyrata]
Length = 1116
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/1035 (49%), Positives = 679/1035 (65%), Gaps = 44/1035 (4%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
SSS A + G S+ AQ ++DA L ADF+ S G SF+YS SV D
Sbjct: 5 SSSSAASNMKPLGDSKPQKSNTAQYSVDAALFADFDQSIYSGKSFNYSKSVISPPNYVPD 64
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
+ TAYL +IQ+G L+QPFGCL+A++E +F+++ SEN+ E L +++ A S
Sbjct: 65 EH------ITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENSSEFLGLLSLASTSHS 118
Query: 119 DH--PVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
V G IG D +T+FT S ++L KA F E+SLLNP+LVH +T+ KPFYAI+HR+
Sbjct: 119 GEFDKVKGLIGIDARTLFTPSSGASLAKAASFTEISLLNPVLVHSRTTQKPFYAILHRID 178
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
+++D EP K + +T AGA+QS KLA +AI+RLQSLP G + CDT++++V LTG
Sbjct: 179 AGIVMDLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGAFCDTVVEDVQRLTG 238
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A
Sbjct: 239 YDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNA 298
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP 355
VKV+Q E+L L L STLRAPH CH QYM NM S+ASL +A+V+ ++
Sbjct: 299 TPVKVVQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVIKGKDS------- 351
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQTL
Sbjct: 352 ---SKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTL 408
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTPN+ Q+ D+V+WL E H
Sbjct: 409 LCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENH 468
Query: 476 M-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
DSTGL+ DSL DAGY GA++LGD VCG+AA IS KD + WFRS TAS ++WGGAKH
Sbjct: 469 GDDSTGLTTDSLVDAGYPGAISLGDAVCGVAAAGISSKDYLLWFRSNTASAIKWGGAKHR 528
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P +KDD +MHPRSSFKAFLEV K+RSLPW+ E+DAIHSL+LI+R +F + L
Sbjct: 529 PKDKDDAGRMHPRSSFKAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTSCRPV-LSGN 587
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
+ EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 588 DV--------ARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLAS 639
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDP---ITLIVN 710
+A+GK +V++ S ++ +L ALQG+EE+++ +++ G + D + ++VN
Sbjct: 640 EAMGKSLANEIVQEESRAVLESLLCKALQGEEEKSVMLKLRKFGQNNHPDSSSDVCVLVN 699
Query: 711 ACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGW 770
+C SRD + ++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 700 SCTSRDYTEKIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENAC 759
Query: 771 CCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD- 829
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++G +
Sbjct: 760 CSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIAGDNV 816
Query: 830 PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTA 889
E FF++ G+Y E L NK + EG V F FLQ+ + E L L E
Sbjct: 817 TESSLVEFFSKEGRYIEASLTANKSTNIEGKVIRCFFFLQIINKE--SGLSCPELKESA- 873
Query: 890 LKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDL 949
+ L L Y +++I+NPL+GI F+ K++E +E+ A Q++ L TS C++Q+ I++ +DL
Sbjct: 874 -QSLNELTYIRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIEGTDL 932
Query: 950 DSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
SI +G L LE EF L +L ISQVM+ +++ E AE+I + LYGD ++LQ
Sbjct: 933 KSIEEGKLQLETEEFRLENILDTIISQVMILLREGNLQLRVEVAEEIKTLPLYGDRVKLQ 992
Query: 1010 QVLADFLSISINFVP 1024
+LAD L +N P
Sbjct: 993 LILADLLRNIVNHAP 1007
>gi|226234967|dbj|BAH47473.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/1066 (48%), Positives = 688/1066 (64%), Gaps = 54/1066 (5%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
SSS A + G S+ AQ ++DA L ADF+ S G SF+YS SV
Sbjct: 5 SSSSAASNMKPLGDSKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSVI------SP 58
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-- 116
SD TAYL +IQ+G L+QPFGCL+A++E +F+++ SEN E L +++ S
Sbjct: 59 HNHVSDEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQC 118
Query: 117 VGDHPVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
+ V G IG D +T+F+ S ++L KA F E+SLLNP+LVH KT+ KPFYAI+HR+
Sbjct: 119 AEFNNVKGLIGIDARTLFSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRID 178
Query: 176 GSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTG 235
++ID E K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V LTG
Sbjct: 179 AGIVIDLEAAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTG 238
Query: 236 YDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA 295
YDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A
Sbjct: 239 YDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNA 298
Query: 296 RHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP 355
VK++Q E+L L L STLRAPHSCH QYM NM SIASL +A+VV ++
Sbjct: 299 TPVKIVQSEELKRPLCLVNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDS------- 351
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQTL
Sbjct: 352 ---SKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTL 408
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTP++ Q+ D+V+WL E H
Sbjct: 409 LCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENH 468
Query: 476 M-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHE 534
DSTGL+ DSL D GY GA++ GD +CG+AA IS KD + WFRS TAS ++WGGAKH
Sbjct: 469 GDDSTGLTTDSLVDVGYPGAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHH 528
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
P KDD +MHPRSSFKAFLEV K+RSLPW+ E+DAIHSL+LI+R +F T
Sbjct: 529 PKNKDDAGRMHPRSSFKAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF---------TS 579
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
S ++ EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 580 SRPVLSANVVERDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQAS 639
Query: 655 KAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDP-----ITLI 708
+A+GK +V++ S ++ ++ ALQG+EE+N+ +++ G N+ P + ++
Sbjct: 640 EAMGKSLANEIVQEESRAALESLMCKALQGEEEKNVMLKLRKFGH--NNHPYYSSGVFVL 697
Query: 709 VNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
VN+C SRD + ++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 698 VNSCTSRDYTEKIIGVCFVGQDITSEKEITDRFIRLQGDYKTIVQSLNPLIPPIFASDEN 757
Query: 769 GWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ 828
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++
Sbjct: 758 ACCSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIASH 814
Query: 829 D-PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
D PE GFF + GKY L NK + EG V G F FLQ+ S + L L E
Sbjct: 815 DIPESSLLGFFNKEGKYIVASLTANKSTNTEGKVIGCFFFLQIISGD--SGLSCPGLKES 872
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ L L Y K++I+NPLSGI F+ K++E +E+ Q++ L TS C++Q+ I++ +
Sbjct: 873 A--QSLNELTYMKQEIKNPLSGIRFAHKLLESSEISETQRKFLETSDACEKQITTIIEGT 930
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL SI +G L LE EF L +L + ISQVM+ + ++ E E+I + LYGD ++
Sbjct: 931 DLKSIEEGNLKLETEEFRLEYILDSIISQVMIMLKERNSQLRVEVTEEIKTLPLYGDRVK 990
Query: 1008 LQQVLADFLSISINFVPN-----GGQLMVSSSLTKDQLGQSVHLAY 1048
LQ +LAD L +N P G + L +D G+ +HL +
Sbjct: 991 LQLILADLLCNIVNHAPFPDSWVGINISPGHELARDN-GRYIHLQF 1035
>gi|224576314|gb|ACN56850.1| phytochrome A [Idahoa scapigera]
Length = 577
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/577 (83%), Positives = 526/577 (91%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYE+PMTAAGALQSYKLAAKAITRLQ+LPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEIPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC ARHVKV
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNARHVKV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDE+L DLTLCGSTLRAPHSCH QYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDEQLSSDLTLCGSTLRAPHSCHAQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRK+LWGLVVCHN TPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKKLWGLVVCHNLTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG+TP D+ L ++ SWL E H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGITPKDYHLQELASWLCECHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ ALALGD VCGMAAV+IS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVKISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFKD + D +TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSSPWKDYEMDAIHSLQLILRNAFKDGESTDGNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL D+KI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDMKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IG+H L LVEDSS++ VKRML AL+G EEQ++QFEIKTH S+ + PI+L+VNACAS+D
Sbjct: 481 IGRHLLNLVEDSSVEIVKRMLENALEGTEEQDVQFEIKTHMSRADAGPISLVVNACASKD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 577
>gi|89331019|emb|CAJ80876.1| phytochrome A [Melampyrum arvense]
Length = 605
Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/607 (77%), Positives = 537/607 (88%), Gaps = 6/607 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVT SLIIDFEPVKP+EVPMTAAGALQSYKLA+KAI RLQSLP GSMERL
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAIARLQSLPGGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM QEVFELTGYDRVM YKFHEDDHGEV++EITK GLEPY GLHYPATDIPQA+RFLF
Sbjct: 61 CETMAQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYAGLHYPATDIPQASRFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HV+V+Q E +P DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRANHVRVIQGENMPTDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEG--DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ E+ D++ KR+RLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAI+VNKELEL
Sbjct: 181 VNEGNEDAGPDDSNLDKRQRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAINVNKELEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA LL+KN+ RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGITPD 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
D Q+ +IVSWL EYH DSTGLS DSLYDAG+ GAL LGDVVCGMAAVRI+ +D +FWFRS
Sbjct: 301 DSQIRNIVSWLEEYHRDSTGLSTDSLYDAGFPGALDLGDVVCGMAAVRITDRDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
SE+R GGAKHE E+DDG+KMHPRSSFKAFLEVVK+RSLPWKD+EMDAIHSLQ+ILR
Sbjct: 361 ---SEIRXGGAKHESGERDDGQKMHPRSSFKAFLEVVKSRSLPWKDFEMDAIHSLQIILR 417
Query: 581 NA-FKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
NA K+ +L I ++L +L+++G++ELEAVTSEMVRLIETA+VPI AV VDGLVN
Sbjct: 418 NASSKEEERKELVGVEIQTRLNELQVDGVQELEAVTSEMVRLIETASVPIFAVGVDGLVN 477
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWNTKIA+LTGL VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIKTHG
Sbjct: 478 GWNTKIADLTGLPVDKAIGMHFLSLVEESSTEIVSKMLELALEGKEEQNVHFEIKTHGPN 537
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
+ PI+LIVNACASRD+ NVVGVCF+AQDIT QK+VMD FTRIEGDY+A VQNPNP+I
Sbjct: 538 SDSSPISLIVNACASRDVRANVVGVCFIAQDITTQKSVMDMFTRIEGDYRATVQNPNPVI 597
Query: 760 PPIFGSD 766
PPIFG+D
Sbjct: 598 PPIFGTD 604
>gi|224576382|gb|ACN56884.1| phytochrome A [Robeschia schimperii]
Length = 577
Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/577 (83%), Positives = 523/577 (90%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQD KL F+LTLCGSTLRAPHSCHLQYM NM++IASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQDGKLSFELTLCGSTLRAPHSCHLQYMANMDTIASLVMAVVVNEEDGEGDAPDSTTHPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q++EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVK DGAALLYK K+W+LG TP+DF L I SWL E+H
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKYDGAALLYKEKVWKLGATPSDFHLQVIASWLCEHHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DST LS DSL+DAG+ AL+LGD V GMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTCLSTDSLHDAGFPRALSLGDSVSGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLV GWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVIGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH L LVEDSS++ VKRML AL+G EQN++FEIKTH S+ + PI+L+VNACA RD
Sbjct: 481 IGKHLLALVEDSSVEIVKRMLENALEGTVEQNVEFEIKTHLSRADAGPISLVVNACAGRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA DIT QKTVMDKFTRIEGDYKAI+Q
Sbjct: 541 LHENVVGVCFVAHDITGQKTVMDKFTRIEGDYKAIIQ 577
>gi|224576208|gb|ACN56797.1| phytochrome A [Alyssum linifolium]
Length = 577
Score = 990 bits (2560), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/577 (83%), Positives = 524/577 (90%), Gaps = 4/577 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQS PSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSXPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQ EKL +LTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 121 LQGEKLSIELTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRT+TLL
Sbjct: 181 MRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTRTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LG TP+++ L +I SWLSEYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEYHLQEIASWLSEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS K+MIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKEMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLK++G++ELEAVT E VRLIETATVPILAVD DG VNGWNTKIAELTGL VD+A
Sbjct: 421 HSKLNDLKLDGIQELEAVTCETVRLIETATVPILAVDSDGSVNGWNTKIAELTGLPVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFL LVEDSS++ VKRML AL+G EEQN+QFEIKTH S + PI+L+VNACASRD
Sbjct: 481 IGKHFLALVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSGADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
L++NVVGVCFV D+T Q TVMDKFTRIEGDYKAI+Q
Sbjct: 541 LNENVVGVCFVXHDLTGQMTVMDKFTRIEGDYKAIIQ 577
>gi|224576340|gb|ACN56863.1| phytochrome A [Myagrum perfoliatum]
Length = 551
Score = 989 bits (2558), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/551 (85%), Positives = 509/551 (92%), Gaps = 3/551 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQK 357
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQK
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLLC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+K+W+LGVTP++F L +I SWL EYH D
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGVTPSEFHLQEIASWLCEYHTD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+PD+
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK IH
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
SKL DLKI+G++ELEA TSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAXTSEMVRLIETATVPILAVDADGLVNGWNTKIAELTGLPVDEAI 480
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH TLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRDL
Sbjct: 481 GKHLPTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 540
Query: 718 HDNVVGVCFVA 728
H+NVV VCFVA
Sbjct: 541 HENVVXVCFVA 551
>gi|452817|emb|CAA54075.1| phytochrome E [Arabidopsis thaliana]
gi|5816999|emb|CAB53654.1| phytochrome E [Arabidopsis thaliana]
gi|7268606|emb|CAB78815.1| phytochrome E [Arabidopsis thaliana]
Length = 1112
Score = 988 bits (2555), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/1066 (48%), Positives = 692/1066 (64%), Gaps = 64/1066 (6%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
S+ +P SNT AQ ++DA L ADF S G SF+YS SV + +
Sbjct: 11 SNMKPQPQKSNT----------AQYSVDAALFADFAQSIYTGKSFNYSKSV----ISPPN 56
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P D TAYL +IQ+G L+QPFGCL+A++E +F+++ S+N+ + L ++ ++PS
Sbjct: 57 HVP--DEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLL--SLPSTS 112
Query: 119 DH----PVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHR 173
V G IG D +T+FT S ++L KA F E+SLLNP+LVH +T+ KPFYAI+HR
Sbjct: 113 HSGEFDKVKGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHR 172
Query: 174 VTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFEL 233
+ +++D EP K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V L
Sbjct: 173 IDAGIVMDLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRL 232
Query: 234 TGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC 293
TGYDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC
Sbjct: 233 TGYDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDC 292
Query: 294 RARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT 353
A VKV+Q E+L L L STLRAPH CH QYM NM S+ASL +A+VV ++
Sbjct: 293 NATPVKVVQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDS----- 347
Query: 354 LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQ
Sbjct: 348 -----SKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQ 402
Query: 414 TLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSE 473
TLLCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTPN+ Q+ D+V+WL E
Sbjct: 403 TLLCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVE 462
Query: 474 YHM-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
H DSTGL+ DSL DAGY GA++LGD VCG+AA S KD + WFRS TAS ++WGGAK
Sbjct: 463 NHGDDSTGLTTDSLVDAGYPGAISLGDAVCGVAAAEFSSKDYLLWFRSNTASAIKWGGAK 522
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD 592
H P +KDD +MHPRSSF AFLEV K+RSLPW+ E+DAIHSL+LI+R +F
Sbjct: 523 HHPKDKDDAGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF--------- 573
Query: 593 TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLS 652
T S + EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 574 TSSRPVLSGNGVARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLL 633
Query: 653 VDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDD---PITLI 708
+A+GK +V++ S ++ +L ALQG+EE+++ +++ G + D + ++
Sbjct: 634 ASEAMGKSLADEIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVL 693
Query: 709 VNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
VN+C SRD +N++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 694 VNSCTSRDYTENIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDEN 753
Query: 769 GWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ 828
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++G
Sbjct: 754 ACCSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIAGD 810
Query: 829 D-PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
+ PE FF + GKY E L NK + EG V F FLQ+ + E L L E
Sbjct: 811 NVPESSLVEFFNKEGKYIEASLTANKSTNIEGKVIRCFFFLQIINKE--SGLSCPELKE- 867
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ + L L Y +++I+NPL+GI F+ K++E +E+ A Q++ L TS C++Q+ I++ +
Sbjct: 868 -SAQSLNELTYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIEST 926
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL SI +G L LE EF L +L ISQVM+ + ++ E AE+I + L GD ++
Sbjct: 927 DLKSIEEGKLQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVK 986
Query: 1008 LQQVLADFLSISINFVPN-----GGQLMVSSSLTKDQLGQSVHLAY 1048
LQ +LAD L +N P G + L++D G+ +HL +
Sbjct: 987 LQLILADLLRNIVNHAPFPNSWVGISISPGQELSRDN-GRYIHLQF 1031
>gi|240255991|ref|NP_193547.4| phytochrome E [Arabidopsis thaliana]
gi|332278136|sp|P42498.2|PHYE_ARATH RecName: Full=Phytochrome E
gi|332658600|gb|AEE84000.1| phytochrome E [Arabidopsis thaliana]
Length = 1112
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/1066 (48%), Positives = 691/1066 (64%), Gaps = 64/1066 (6%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
S+ +P SNT AQ ++DA L ADF S G SF+YS SV + +
Sbjct: 11 SNMKPQPQKSNT----------AQYSVDAALFADFAQSIYTGKSFNYSKSV----ISPPN 56
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P D TAYL +IQ+G L+QPFGCL+A++E +F+++ S+N+ + L ++ ++PS
Sbjct: 57 HVP--DEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLL--SLPSTS 112
Query: 119 DH----PVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHR 173
V G IG D +T+FT S ++L KA F E+SLLNP+LVH +T+ KPFYAI+HR
Sbjct: 113 HSGEFDKVKGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHR 172
Query: 174 VTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFEL 233
+ +++D EP K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V L
Sbjct: 173 IDAGIVMDLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRL 232
Query: 234 TGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC 293
TGYDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC
Sbjct: 233 TGYDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDC 292
Query: 294 RARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT 353
A VKV+Q E+L L L STLRAPH CH QYM NM S+ASL +A+VV ++
Sbjct: 293 NATPVKVVQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDS----- 347
Query: 354 LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQ
Sbjct: 348 -----SKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQ 402
Query: 414 TLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSE 473
TLLCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTPN+ Q+ D+V+WL E
Sbjct: 403 TLLCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVE 462
Query: 474 YHM-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
H DSTGL+ DSL DAGY GA++LGD VCG+AA S KD + WFRS TAS ++WGGAK
Sbjct: 463 NHGDDSTGLTTDSLVDAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAK 522
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD 592
H P +KDD +MHPRSSF AFLEV K+RSLPW+ E+DAIHSL+LI+R +F
Sbjct: 523 HHPKDKDDAGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF--------- 573
Query: 593 TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLS 652
T S + EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 574 TSSRPVLSGNGVARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLL 633
Query: 653 VDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDD---PITLI 708
+A+GK +V++ S ++ +L ALQG+EE+++ +++ G + D + ++
Sbjct: 634 ASEAMGKSLADEIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVL 693
Query: 709 VNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
VN+C SRD +N++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 694 VNSCTSRDYTENIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDEN 753
Query: 769 GWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ 828
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++G
Sbjct: 754 ACCSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIAGD 810
Query: 829 D-PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
+ PE FF + GKY E L NK + EG V F FLQ+ + E L L E
Sbjct: 811 NVPESSLVEFFNKEGKYIEASLTANKSTNIEGKVIRCFFFLQIINKE--SGLSCPELKES 868
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ L L Y +++I+NPL+GI F+ K++E +E+ A Q++ L TS C++Q+ I++ +
Sbjct: 869 A--QSLNELTYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIEST 926
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL SI +G L LE EF L +L ISQVM+ + ++ E AE+I + L GD ++
Sbjct: 927 DLKSIEEGKLQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVK 986
Query: 1008 LQQVLADFLSISINFVPN-----GGQLMVSSSLTKDQLGQSVHLAY 1048
LQ +LAD L +N P G + L++D G+ +HL +
Sbjct: 987 LQLILADLLRNIVNHAPFPNSWVGISISPGQELSRDN-GRYIHLQF 1031
>gi|89330082|emb|CAJ80952.1| phytochrome A [Orobanche raddeana]
Length = 584
Score = 985 bits (2547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/584 (78%), Positives = 523/584 (89%), Gaps = 2/584 (0%)
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
PYEVPMTAAGALQSYKLAAKAI LQ+LP GSMERLCDTM+Q+VFELTGYDRVM YKFHE
Sbjct: 1 PYEVPMTAAGALQSYKLAAKAIACLQALPGGSMERLCDTMVQQVFELTGYDRVMIYKFHE 60
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
DDHGEV +EITK GLEPY+GLHYPATDIPQAARFLFMKNKVRMI DCRA HVKV+QD+
Sbjct: 61 DDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQDDNF 120
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKRKRLWGL 364
PFDLTLCGSTLRAPH CH QYMENMNSIASLVM+VVVN+ +E+G ++ P KRKRLWGL
Sbjct: 121 PFDLTLCGSTLRAPHGCHSQYMENMNSIASLVMSVVVNEGDEDGPDSSSGPDKRKRLWGL 180
Query: 365 VVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA 424
VVCHNT PRF+PFPLRYACEFL QVF+IHVNKELELE Q+LEKNILRTQTLLCD+L+RD
Sbjct: 181 VVCHNTCPRFIPFPLRYACEFLVQVFSIHVNKELELESQMLEKNILRTQTLLCDLLLRDV 240
Query: 425 PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSAD 484
PLGIV+QSPN+MDLVKCDGA LL+K +RLG+TP DFQ+ DI SWL EYH DSTGLS D
Sbjct: 241 PLGIVSQSPNVMDLVKCDGAILLHKRTKYRLGLTPTDFQIRDIPSWLDEYHQDSTGLSTD 300
Query: 485 SLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKM 544
SLYDAG+ GALALG +CGMAAV+I+ +D +FWFRS TA+E+RWGGAKHE +EKDDGRKM
Sbjct: 301 SLYDAGFPGALALGHALCGMAAVKITDEDWLFWFRSHTAAEIRWGGAKHELEEKDDGRKM 360
Query: 545 HPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLK 604
HPRSSF+AFLEVVKTRSLPWKDYEMD IHSLQLILRNA+K+ DL+++ IH+KL +L+
Sbjct: 361 HPRSSFRAFLEVVKTRSLPWKDYEMDGIHSLQLILRNAYKESEEKDLESREIHAKLNELQ 420
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTL 664
I+G+KE+E +TSEMVRLIETATVPI +V VDGLVNGWNTKI++LTGLSVD+AIG HFL L
Sbjct: 421 IDGVKEIEVLTSEMVRLIETATVPIFSVGVDGLVNGWNTKISDLTGLSVDEAIGMHFLAL 480
Query: 665 VEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGV 724
VEDSS DTV +ML LALQG+EE ++QFEIKTHG++ PI+LIVNACASRD+ +NVVGV
Sbjct: 481 VEDSSADTVSKMLGLALQGKEEHDVQFEIKTHGTRSESGPISLIVNACASRDVKENVVGV 540
Query: 725 CFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
CF+AQDIT QK++MDKFTRIEGDY++I+QNPNPLIPPIFG+DEF
Sbjct: 541 CFIAQDITTQKSMMDKFTRIEGDYRSIIQNPNPLIPPIFGTDEF 584
>gi|89331071|emb|CAJ80902.1| phytochrome A [Castilleja sulphurea]
Length = 585
Score = 981 bits (2535), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/585 (78%), Positives = 525/585 (89%), Gaps = 3/585 (0%)
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
PYEVPMTAAGALQSYKLAAKAITRLQ+LPSGSME+LCDTM+QEVFELTGYDRVM YKFH+
Sbjct: 1 PYEVPMTAAGALQSYKLAAKAITRLQALPSGSMEQLCDTMVQEVFELTGYDRVMIYKFHD 60
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
DDHGEV+SE+TK GL+PY+GLHYPATDIPQAARFLF+KNKVRMI DCRA HVKV+QD+ L
Sbjct: 61 DDHGEVLSEVTKPGLDPYVGLHYPATDIPQAARFLFLKNKVRMICDCRANHVKVIQDDNL 120
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL--PQKRKRLWGL 364
PFDLTLCGS LRAPHSCHLQYMENMNSIASLVM+VVVN+ E+G ++ P K+KRLWGL
Sbjct: 121 PFDLTLCGSILRAPHSCHLQYMENMNSIASLVMSVVVNEGNEDGPDSSSHPDKKKRLWGL 180
Query: 365 VVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA 424
VVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q+LEKNI+RTQTLLCDML+RDA
Sbjct: 181 VVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIELENQMLEKNIIRTQTLLCDMLLRDA 240
Query: 425 PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSAD 484
PLGIV+QSPN+MD VK DGA LLY+ K +RL TP+D+Q+ DIVSWL EYH +STGLS D
Sbjct: 241 PLGIVSQSPNVMDFVKGDGAILLYRTKNYRLRKTPSDYQIRDIVSWLDEYHHESTGLSTD 300
Query: 485 SLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKM 544
SLYDAG+ GALALGD VCGMAAVRI+ D +FWFRS TA+E+RWGG KHEP EKDDGRKM
Sbjct: 301 SLYDAGFPGALALGDAVCGMAAVRITNTDWLFWFRSHTAAEIRWGGGKHEPGEKDDGRKM 360
Query: 545 HPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF-KDVGTLDLDTKSIHSKLCDL 603
HPR SFKAFLEVVKTRSLPWKD+EMDAIHSLQLILRNA K+V +D+D K IH++L DL
Sbjct: 361 HPRLSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNASNKEVEEMDVDGKEIHARLNDL 420
Query: 604 KIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT 663
+++G+KELEAVTSEMVRLIETA+VPI AVD+DGLVNGWNTKIA+LTGL VDKAIG+HFL
Sbjct: 421 QLDGIKELEAVTSEMVRLIETASVPIFAVDMDGLVNGWNTKIADLTGLPVDKAIGRHFLG 480
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LVE SS + V +ML LALQG EEQN+QFEIKT+G + PI+LI+NACAS D+ +NVVG
Sbjct: 481 LVEYSSAEVVNKMLELALQGNEEQNVQFEIKTYGPRSESAPISLIMNACASWDVKENVVG 540
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
VCF+AQDIT QK++MDKFTRIEGDY+AIVQNPN LIPPIFG+D F
Sbjct: 541 VCFIAQDITIQKSMMDKFTRIEGDYRAIVQNPNQLIPPIFGTDGF 585
>gi|156753023|gb|ABU94257.1| phytochrome P [Pinus sylvestris]
gi|156753027|gb|ABU94259.1| phytochrome P [Pinus sylvestris]
gi|156753029|gb|ABU94260.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/730 (63%), Positives = 571/730 (78%), Gaps = 8/730 (1%)
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VL IG+D++T+FTA SA +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++ID
Sbjct: 11 VLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVID 70
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EP++ + M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGYDRVM
Sbjct: 71 LEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMV 130
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+
Sbjct: 131 YKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVI 190
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRL 361
Q E+L L L GSTLRAPH CH QYM NM SIASLVMAV++N ++EG + + +L
Sbjct: 191 QSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGGGS-GRNSMKL 249
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGLVVCH+T+PR VPFPLRYACEFL Q + +N EL+L Q+ EK+ILRTQTLLCDML+
Sbjct: 250 WGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 309
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RDAP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGL
Sbjct: 310 RDAPMGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPTEAQIKDIADWLLEHHGDSTGL 369
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
S DSL DAGY GA +LGD VCGMA+ RI+ KD +FWFRS TA E++WGGAKH PD+KDD
Sbjct: 370 STDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDA 429
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKL 600
R+MHPRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L
Sbjct: 430 RRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHSRL 487
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
DL+++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G
Sbjct: 488 NDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMS 547
Query: 661 FLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHD 719
+ LV + S++ V++ML+ AL+G+EE+N++ +KT G + + + L+VNAC+SRD D
Sbjct: 548 LVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTD 607
Query: 720 NVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMV 779
N+VGVCFV QD+T QK VMDKF RI+GDY++IVQ+PNPLIPPIF SDE+ C EWN AM
Sbjct: 608 NIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCSEWNAAME 667
Query: 780 KLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFA 839
K+TGW +EVI K+L+ E+FG CCRLK Q+A IVL+ A+ GQ+ EK PF FF
Sbjct: 668 KVTGWTHDEVIGKMLVGEIFG---GCCRLKGQDAVTKFTIVLHSAIDGQEIEKFPFAFFD 724
Query: 840 RNGKYAECLL 849
+ GKY E LL
Sbjct: 725 KQGKYVEALL 734
>gi|224576210|gb|ACN56798.1| phytochrome A [Arabidopsis lyrata]
Length = 562
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/577 (82%), Positives = 516/577 (89%), Gaps = 19/577 (3%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD +T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDASTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q+LEKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMLEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAAL YK+KIW+LG TP++F L +I SWL EYHM
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKDKIWKLGTTPSEFHLQEIASWLCEYHM 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 301 DSTGLSTDSLHDAGFPKALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLP RNAFKD T D++T I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLP---------------XRNAFKDSETTDVNTNVI 405
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSV +A
Sbjct: 406 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVVEA 465
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 466 IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 525
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 526 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 562
>gi|156752953|gb|ABU94222.1| phytochrome P [Pinus sylvestris]
gi|156752955|gb|ABU94223.1| phytochrome P [Pinus sylvestris]
gi|156752957|gb|ABU94224.1| phytochrome P [Pinus sylvestris]
gi|156752959|gb|ABU94225.1| phytochrome P [Pinus sylvestris]
gi|156752961|gb|ABU94226.1| phytochrome P [Pinus sylvestris]
gi|156752963|gb|ABU94227.1| phytochrome P [Pinus sylvestris]
gi|156752965|gb|ABU94228.1| phytochrome P [Pinus sylvestris]
gi|156752967|gb|ABU94229.1| phytochrome P [Pinus sylvestris]
gi|156752969|gb|ABU94230.1| phytochrome P [Pinus sylvestris]
gi|156752971|gb|ABU94231.1| phytochrome P [Pinus sylvestris]
gi|156752973|gb|ABU94232.1| phytochrome P [Pinus sylvestris]
gi|156752975|gb|ABU94233.1| phytochrome P [Pinus sylvestris]
gi|156752977|gb|ABU94234.1| phytochrome P [Pinus sylvestris]
gi|156752979|gb|ABU94235.1| phytochrome P [Pinus sylvestris]
gi|156752981|gb|ABU94236.1| phytochrome P [Pinus sylvestris]
gi|156752983|gb|ABU94237.1| phytochrome P [Pinus sylvestris]
gi|156752985|gb|ABU94238.1| phytochrome P [Pinus sylvestris]
gi|156752987|gb|ABU94239.1| phytochrome P [Pinus sylvestris]
gi|156752989|gb|ABU94240.1| phytochrome P [Pinus sylvestris]
gi|156752991|gb|ABU94241.1| phytochrome P [Pinus sylvestris]
gi|156752993|gb|ABU94242.1| phytochrome P [Pinus sylvestris]
gi|156752997|gb|ABU94244.1| phytochrome P [Pinus sylvestris]
gi|156752999|gb|ABU94245.1| phytochrome P [Pinus sylvestris]
gi|156753001|gb|ABU94246.1| phytochrome P [Pinus sylvestris]
gi|156753003|gb|ABU94247.1| phytochrome P [Pinus sylvestris]
gi|156753005|gb|ABU94248.1| phytochrome P [Pinus sylvestris]
gi|156753007|gb|ABU94249.1| phytochrome P [Pinus sylvestris]
gi|156753009|gb|ABU94250.1| phytochrome P [Pinus sylvestris]
gi|156753011|gb|ABU94251.1| phytochrome P [Pinus sylvestris]
gi|156753013|gb|ABU94252.1| phytochrome P [Pinus sylvestris]
gi|156753015|gb|ABU94253.1| phytochrome P [Pinus sylvestris]
gi|156753017|gb|ABU94254.1| phytochrome P [Pinus sylvestris]
gi|156753019|gb|ABU94255.1| phytochrome P [Pinus sylvestris]
gi|156753021|gb|ABU94256.1| phytochrome P [Pinus sylvestris]
gi|156753025|gb|ABU94258.1| phytochrome P [Pinus sylvestris]
gi|156753031|gb|ABU94261.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/730 (63%), Positives = 570/730 (78%), Gaps = 8/730 (1%)
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VL IG+D++T+FTA SA +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++ID
Sbjct: 11 VLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVID 70
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EP++ + M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGYDRVM
Sbjct: 71 LEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMV 130
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+
Sbjct: 131 YKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVI 190
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRL 361
Q E+L L L GSTLRAPH CH QYM NM SIASLVMAV++N ++EG + + +L
Sbjct: 191 QSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGGGS-GRNSMKL 249
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGLVVCH+T+PR VPFPLRYACEFL Q + +N EL+L Q+ EK+ILRTQTLLCDML+
Sbjct: 250 WGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 309
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RDAP+GIVTQSP+I DLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGL
Sbjct: 310 RDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGL 369
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
S DSL DAGY GA +LGD VCGMA+ RI+ KD +FWFRS TA E++WGGAKH PD+KDD
Sbjct: 370 STDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDA 429
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKL 600
R+MHPRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L
Sbjct: 430 RRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDID--DSGTKTMVHSRL 487
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
DL+++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G
Sbjct: 488 NDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMS 547
Query: 661 FLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHD 719
+ LV + S++ V++ML+ AL+G+EE+N++ +KT G + + + L+VNAC+SRD D
Sbjct: 548 LVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTD 607
Query: 720 NVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMV 779
N+VGVCFV QD+T QK VMDKF RI+GDY++IVQ+PNPLIPPIF SDE+ C EWN AM
Sbjct: 608 NIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCSEWNAAME 667
Query: 780 KLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFA 839
K+TGW +EVI K+L+ E+FG CCRLK Q+A IVL+ A+ GQ+ EK PF FF
Sbjct: 668 KVTGWTHDEVIGKMLVGEIFG---GCCRLKGQDAVTKFTIVLHSAIDGQEIEKFPFAFFD 724
Query: 840 RNGKYAECLL 849
+ GKY E LL
Sbjct: 725 KQGKYVEALL 734
>gi|156752995|gb|ABU94243.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 973 bits (2514), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/730 (63%), Positives = 570/730 (78%), Gaps = 8/730 (1%)
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VL IG+D++T+FTA SA +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++ID
Sbjct: 11 VLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVID 70
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EP++ + M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGYDRVM
Sbjct: 71 LEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMV 130
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+
Sbjct: 131 YKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVI 190
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRL 361
Q E+L L L GSTLRAPH CH QYM NM SIASLVMAV++N ++EG + + +L
Sbjct: 191 QSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGGGS-GRNSMKL 249
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGLVVCH+T+PR VPFPLRYACEFL Q + +N EL+L Q+ EK+ILRTQTLLCDML+
Sbjct: 250 WGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 309
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RDAP+GIVTQSP+I DLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGL
Sbjct: 310 RDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGL 369
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
S DSL DAGY GA +LGD VCGMA+ RI+ KD +FWFRS TA E++WGGAKH PD+KDD
Sbjct: 370 STDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDA 429
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKL 600
R+MHPRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L
Sbjct: 430 RRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDID--DSGTKTMVHSRL 487
Query: 601 CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH 660
DL+++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G
Sbjct: 488 NDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVAEAMGMS 547
Query: 661 FLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHD 719
+ LV + S++ V++ML+ AL+G+EE+N++ +KT G + + + L+VNAC+SRD D
Sbjct: 548 LVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTD 607
Query: 720 NVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMV 779
N+VGVCFV QD+T QK VMDKF RI+GDY++IVQ+PNPLIPPIF SDE+ C EWN AM
Sbjct: 608 NIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCSEWNAAME 667
Query: 780 KLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFA 839
K+TGW +EVI K+L+ E+FG CCRLK Q+A IVL+ A+ GQ+ EK PF FF
Sbjct: 668 KVTGWTHDEVIGKMLVGEIFG---GCCRLKGQDAVTKFTIVLHSAIDGQEIEKFPFAFFD 724
Query: 840 RNGKYAECLL 849
+ GKY E LL
Sbjct: 725 KQGKYVEALL 734
>gi|224576328|gb|ACN56857.1| phytochrome A [Mancoa hispida]
Length = 560
Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/560 (83%), Positives = 512/560 (91%), Gaps = 4/560 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTG DRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGXDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPA DIPQAARFLFMK+KVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPAIDIPQAARFLFMKSKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ +GD T PQ
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGDGDAPNSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
+STGLS DSL+DAG+ AL+LGD V GMAAVRIS KDMIFWFRS TA EV+WGGAKH+PD
Sbjct: 301 ESTGLSTDSLHDAGFPRALSLGDSVRGMAAVRISSKDMIFWFRSHTAGEVKWGGAKHDPD 360
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T +++TK I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTEVNTKVI 420
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
HSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKH LTLVEDSS+D VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 481 IGKHLLTLVEDSSVDIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 540
Query: 717 LHDNVVGVCFVAQDITPQKT 736
LH+ VVGVCFVA D+T QKT
Sbjct: 541 LHETVVGVCFVAHDLTGQKT 560
>gi|77963962|gb|ABB13323.1| phytochrome B [Hordeum vulgare subsp. vulgare]
gi|77963964|gb|ABB13324.1| phytochrome B [Hordeum vulgare subsp. vulgare]
gi|77963966|gb|ABB13325.1| phytochrome B [Hordeum vulgare subsp. vulgare]
Length = 814
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/823 (57%), Positives = 605/823 (73%), Gaps = 26/823 (3%)
Query: 23 IAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
+AQ T+DA LHA FE SG S FDYS S+ T P S++ AYL IQ+G
Sbjct: 2 VAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPT------PSSEQQIAAYLSRIQRGGH 55
Query: 80 IQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKTIFT 134
IQPFGC LA+ D+ +F+++A+SENA +LL + +H+VPS+ P + +G+D + +F+
Sbjct: 56 IQPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFS 115
Query: 135 APSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTA 194
S L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + + ++
Sbjct: 116 PSSGVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSI 175
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM YKFH+D+HGEV++
Sbjct: 176 AGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLA 235
Query: 255 EITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCG 314
E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD +P L L G
Sbjct: 236 ESRRGDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLCLVG 295
Query: 315 STLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN----TLPQKRKRLWGLVVCHNT 370
STLR+PH CH QYM NM SIASLVMAV+++ E+ N +P K LWGLVVCH+T
Sbjct: 296 STLRSPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMK-LWGLVVCHHT 354
Query: 371 TPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVT 430
+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GIVT
Sbjct: 355 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 414
Query: 431 QSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAG 490
QSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL DAG
Sbjct: 415 QSPSIMDLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAG 474
Query: 491 YLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSF 550
Y GA ALGD VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRSSF
Sbjct: 475 YPGATALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 534
Query: 551 KAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKIEG 607
KAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D G ++K+I +L +L++ G
Sbjct: 535 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRG 594
Query: 608 MKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVE 666
+ EL +V EMVRLIETATVPI AVD G +NGWN K+AELTGL+V++A+GK + L+
Sbjct: 595 IDELSSVAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLIKDLIF 654
Query: 667 DSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCF 726
S + V+++L AL+G+E N++ ++KT GS+ + PI +IVNAC+SRD N+VGVCF
Sbjct: 655 KESEEIVEKLLSQALRGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKNIVGVCF 714
Query: 727 VAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKR 786
V QDIT QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM LTGW R
Sbjct: 715 VGQDITGQKVVMDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMENLTGWSR 774
Query: 787 EEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD 829
EV+ KLL+ EVFG CCRLK +A I L+ A+ GQD
Sbjct: 775 GEVVGKLLVGEVFGN---CCRLKGPDALTKFMIALHNAIGGQD 814
>gi|224576322|gb|ACN56854.1| phytochrome A [Lepidium alyssoides]
Length = 572
Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/574 (82%), Positives = 515/574 (89%), Gaps = 3/574 (0%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQD KL FDLTLCGS LRAPHSCHLQYM NM SIASLVMAVVVN EE+G+ +P +
Sbjct: 121 LQDGKLSFDLTLCGSILRAPHSCHLQYMANMESIASLVMAVVVN--EEDGEEDVPDSTTQ 178
Query: 361 -LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDM 419
LWGLVVCHNTTPRFVPFPLRYACEFLAQV AIHVNKE++LE QI+EKNILRTQTLLCDM
Sbjct: 179 PLWGLVVCHNTTPRFVPFPLRYACEFLAQVLAIHVNKEVQLENQIVEKNILRTQTLLCDM 238
Query: 420 LMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDST 479
LMRDAPLGIVTQSPNIMDLVKCDGAALLYK+KIW LG TP++F L +I SWL E H DST
Sbjct: 239 LMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKIWTLGKTPSEFHLQEIASWLCECHTDST 298
Query: 480 GLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKD 539
GLS DSL+DA + AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD++D
Sbjct: 299 GLSTDSLHDARFPRALSLGDAVCGMAAVRISAKDMIFWFRSHTAGEVRWGGAKHDPDDRD 358
Query: 540 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSK 599
D R+M PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++T IHSK
Sbjct: 359 DARRMLPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTNVIHSK 418
Query: 600 LCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGK 659
L DLKI+G++ELEAVTS MVRLIETA VPILAVD DGLVNGWNTKIAELTGL VD+AIGK
Sbjct: 419 LNDLKIDGIQELEAVTSVMVRLIETAMVPILAVDSDGLVNGWNTKIAELTGLPVDEAIGK 478
Query: 660 HFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHD 719
H LTLVE+SS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+ +VNACASRDLH+
Sbjct: 479 HLLTLVEESSVEIVKRMLENALEGNEEQNVQFEIKTHLSRADAGPISSVVNACASRDLHE 538
Query: 720 NVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+Q
Sbjct: 539 NVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQ 572
>gi|89331139|emb|CAJ80936.1| phytochrome A [Melampyrum carstiense]
Length = 597
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/596 (77%), Positives = 526/596 (88%), Gaps = 7/596 (1%)
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
L+IDFEPVKPYEVPMTAAGALQSYKLA+KAI RLQSLP GSMERLC+TM QEVFELTGYD
Sbjct: 1 LVIDFEPVKPYEVPMTAAGALQSYKLASKAIARLQSLPGGSMERLCETMAQEVFELTGYD 60
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVM YKFHEDDHGEV++EITK GLEPY GLHYPATDIPQA+RFLFMKNKVRMI DCRA H
Sbjct: 61 RVMIYKFHEDDHGEVLNEITKPGLEPYAGLHYPATDIPQASRFLFMKNKVRMICDCRANH 120
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG--DNTLP 355
V+V+QD+ LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM++VVN+ E+ D++
Sbjct: 121 VRVIQDKNLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSIVVNEGNEDAGPDDSSQ 180
Query: 356 Q---KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRT 412
Q KR+RLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAI+VNKELELE Q+LEKNILRT
Sbjct: 181 QNLDKRQRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAINVNKELELENQMLEKNILRT 240
Query: 413 QTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLS 472
QTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA LL+KN+ LG+TPND Q+ +IVSWL
Sbjct: 241 QTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHCLGITPNDSQIRNIVSWLE 300
Query: 473 EYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
EYH DSTGLS DSLYDAG+ GAL LGDVVCGMAAVRI+ +D +FWFRS TASE+RWGGAK
Sbjct: 301 EYHRDSTGLSTDSLYDAGFPGALGLGDVVCGMAAVRITDRDWLFWFRSHTASEIRWGGAK 360
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNA-FKDVGTL-D 590
HE E+DDG+KMHPRSSFKAFLEVVK+RSLPWKD+EMDAIHSLQ+ILRNA K++ +
Sbjct: 361 HESGERDDGQKMHPRSSFKAFLEVVKSRSLPWKDFEMDAIHSLQIILRNASSKEMEERKE 420
Query: 591 LDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTG 650
L I +KL +L++ G++ELEAVTSE+VRLIETA+VPI +V VDGLVNGWNTKIA+LTG
Sbjct: 421 LVGVEIQAKLNELQVGGVQELEAVTSEIVRLIETASVPIFSVGVDGLVNGWNTKIADLTG 480
Query: 651 LSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVN 710
L VDKAIG HFL+LVE+SS + V +ML LAL+G+EEQN+ FEIKT G + PI+LIVN
Sbjct: 481 LPVDKAIGMHFLSLVEESSTEIVSKMLELALEGKEEQNVHFEIKTQGPSSDSSPISLIVN 540
Query: 711 ACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSD 766
AC SRD+ NVVGVCF+AQDIT QK+VMD FTRIEGDY+AIVQNPNP+IPPIFG+D
Sbjct: 541 ACTSRDVRANVVGVCFIAQDITTQKSVMDMFTRIEGDYRAIVQNPNPVIPPIFGTD 596
>gi|224576312|gb|ACN56849.1| phytochrome A [Idahoa scapigera]
Length = 579
Score = 968 bits (2502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/579 (81%), Positives = 516/579 (89%), Gaps = 10/579 (1%)
Query: 185 VKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKF 244
VKPYEVPMTAAGALQSYKLAAKA+TRLQSLPSGS ERLCDTM+QEVFELTGYDRVMAYKF
Sbjct: 1 VKPYEVPMTAAGALQSYKLAAKAVTRLQSLPSGSTERLCDTMVQEVFELTGYDRVMAYKF 60
Query: 245 HEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDE 304
H+DDHGEVVSE+TK GLE YLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+H VLQDE
Sbjct: 61 HDDDHGEVVSEVTKPGLETYLGLHYPATDIPQASRFLFMKNKVRMIVDCNAKHATVLQDE 120
Query: 305 KLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--------NTLPQ 356
KL F+LTLCGSTLRAPHSCHLQYM NM SIASLVMAVVVN+E+ E D T PQ
Sbjct: 121 KLSFELTLCGSTLRAPHSCHLQYMANMGSIASLVMAVVVNEEDGEVDAAPPDSSSTTQPQ 180
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE Q +EKNILRTQTLL
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQYVEKNILRTQTLL 240
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYK+KIW+LG+TP++F L +I SWL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKIWKLGITPSEFHLQEIASWLCEYHT 300
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISP--KDMIFWFRSQTASEVRWGGAKHE 534
DSTGLS DSL+DAG+ ALALGD VCGMAAVRIS +DMIFWFRS TA EVRWGGAKH+
Sbjct: 301 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISSSSEDMIFWFRSHTAGEVRWGGAKHD 360
Query: 535 PDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK 594
PD++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDA HSLQLILRNAFKD T D +T
Sbjct: 361 PDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDATHSLQLILRNAFKDGETTDDNTN 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEA+TSEMVRLIETATVPILAVD DGLVNGWNTKIA+LTGL VD
Sbjct: 421 IIHSKLNDLKIDGIQELEAITSEMVRLIETATVPILAVDSDGLVNGWNTKIADLTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
+AIGKH L+LVEDSS++ VKRML ALQG EE +++FEIKT+ S PI+L+VNACAS
Sbjct: 481 EAIGKHLLSLVEDSSLEIVKRMLENALQGTEEHSVEFEIKTYQSMAESGPISLVVNACAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQ 753
RDLH+NVVGVCFVA D+T QKTVMDKFT IEGDYKAI+Q
Sbjct: 541 RDLHENVVGVCFVAHDLTGQKTVMDKFTWIEGDYKAILQ 579
>gi|89331029|emb|CAJ80881.1| phytochrome A [Alectra sessiliflora]
Length = 619
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/619 (73%), Positives = 526/619 (84%), Gaps = 13/619 (2%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSL+IDFEPVKP+EVPMTAAGALQSYKLAAKAI RLQ+ PSGS+ERL
Sbjct: 1 SGKPFYAIIHRVTGSLVIDFEPVKPHEVPMTAAGALQSYKLAAKAIARLQATPSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM QEVFELTGYDRVM YKFH+DDHGEV +EITK GLEPY GLHYPATDIPQAARFLF
Sbjct: 61 CETMAQEVFELTGYDRVMVYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCR+ HVKV+QDE L DLTLCGSTLRAPHSCHL+YMENMNSIASLVMAVV
Sbjct: 121 MKNKVRMICDCRSAHVKVVQDEGLFSDLTLCGSTLRAPHSCHLRYMENMNSIASLVMAVV 180
Query: 343 VNDEEEEGDNTL-------PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVN 395
VN+ +E + P+K+KRLWGLVVCH+T+PRFVPFPLRYACEFL+QVF+IHV+
Sbjct: 181 VNEGNDEESSASSSSTSSHPEKKKRLWGLVVCHHTSPRFVPFPLRYACEFLSQVFSIHVS 240
Query: 396 KELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRL 455
KELEL Q EKNIL+TQT+LCDML+R PL IVTQSP +MDLVKCDGA LLYK K RL
Sbjct: 241 KELELLNQTQEKNILKTQTMLCDMLLRGNPLAIVTQSPTVMDLVKCDGAVLLYKGKTHRL 300
Query: 456 GVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMI 515
G+ P+D Q+ DI+SWL EYH DSTG S DSL DAG+ GA ALGD CGMAA+RI+ +D +
Sbjct: 301 GLAPSDLQIRDIMSWLDEYHRDSTGTSTDSLLDAGFPGAAALGDAFCGMAAIRITGRDWL 360
Query: 516 FWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSL 575
FWFRS TA+EVRWGGAKHE ++DDGR+MHPRSSF AFLEVVK RS+PW+D+EMDAIHSL
Sbjct: 361 FWFRSHTAAEVRWGGAKHEKGDEDDGRRMHPRSSFNAFLEVVKARSVPWRDFEMDAIHSL 420
Query: 576 QLILRNAFKDVGTLDLD------TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPI 629
QLILRNA + + I ++L +L I+G +E+EAVTSEMVRLIETA+VPI
Sbjct: 421 QLILRNACEKEMEEEERRKDMVVAGEIQARLTELHIDGAREMEAVTSEMVRLIETASVPI 480
Query: 630 LAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNI 689
LAV VDGLVNGWNTKIA+LTGL VD+AIG+ FL LVE++S+D V RML ALQG EE+N+
Sbjct: 481 LAVGVDGLVNGWNTKIADLTGLLVDEAIGQPFLALVEEASVDAVSRMLERALQGHEERNV 540
Query: 690 QFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYK 749
QFEIKTHG + PI+L+VNACASRD+ +NVVGVCF+AQD+T ++++MDKFTRIEGDY+
Sbjct: 541 QFEIKTHGPRAESGPISLVVNACASRDVRENVVGVCFIAQDVTTERSMMDKFTRIEGDYR 600
Query: 750 AIVQNPNPLIPPIFGSDEF 768
AIVQNPNPLIPPIFGSDEF
Sbjct: 601 AIVQNPNPLIPPIFGSDEF 619
>gi|89330144|emb|CAJ80984.1| phytochrome A [Striga bilabiata subsp. linearifolia]
Length = 618
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/618 (74%), Positives = 523/618 (84%), Gaps = 12/618 (1%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSL+IDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERL
Sbjct: 1 SGKPFYAIIHRVTGSLVIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM QEVFELTGYDRVM YKFHEDDHGEV +E+T+ GLEPYLGLHYPATDIPQAARFLF
Sbjct: 61 CETMAQEVFELTGYDRVMVYKFHEDDHGEVFAEVTRPGLEPYLGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DC A HVKV+QDE ++TLCGSTLRAPHSCHL+YMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCHAAHVKVVQDECFSSNVTLCGSTLRAPHSCHLRYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL------PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNK 396
+N+ +E + P K+KRLWGLVVCH+T+PRFVPFPLRYACEFL+QVF+IHV K
Sbjct: 181 INEGTDEESSASSSSSSHPDKQKRLWGLVVCHHTSPRFVPFPLRYACEFLSQVFSIHVGK 240
Query: 397 ELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLG 456
ELEL Q LEKNIL+TQTLLCDML+R PL +VTQSP +MDLVKCDGA LLYK K RLG
Sbjct: 241 ELELLNQTLEKNILKTQTLLCDMLLRGNPLAVVTQSPTVMDLVKCDGAVLLYKGKNHRLG 300
Query: 457 VTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIF 516
+ P+D Q+ DIVSWL EYH DSTG++ DSL AG+ GA ALGD CGMAAVRI+ +D +F
Sbjct: 301 LAPSDLQVLDIVSWLDEYHRDSTGMTTDSLLGAGFPGAAALGDAFCGMAAVRITGRDWLF 360
Query: 517 WFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQ 576
WFRS TA+EV+WGGAK E +DDGRKMHPRSSFKAFLEVVK RS+PW+D+EMDAIHSLQ
Sbjct: 361 WFRSHTAAEVQWGGAKQEKGVEDDGRKMHPRSSFKAFLEVVKARSVPWRDFEMDAIHSLQ 420
Query: 577 LILRNAFKDVGTLDLDTK------SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
LILRNA + K I S+L +L I+G KE+E VTSEMVRLIETA+VPIL
Sbjct: 421 LILRNACDKEEEEEARRKDMVVAGEIQSRLNELHIDGAKEMEMVTSEMVRLIETASVPIL 480
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
AV VDGLVNGWNTKIAELTGL VD AIG+ FL LVE+SS+D V+RML LALQGQEEQN+
Sbjct: 481 AVGVDGLVNGWNTKIAELTGLPVDGAIGQKFLALVEESSVDVVRRMLELALQGQEEQNVH 540
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
FEIKTH ++ PI+L+VNAC SRD+ DNVVGVCF+AQD+T ++++MDKFTRIEGDY+A
Sbjct: 541 FEIKTHEARAESGPISLVVNACTSRDIKDNVVGVCFIAQDVTTERSMMDKFTRIEGDYQA 600
Query: 751 IVQNPNPLIPPIFGSDEF 768
IVQNPNPLIPPIFG DEF
Sbjct: 601 IVQNPNPLIPPIFGLDEF 618
>gi|89331091|emb|CAJ80912.1| phytochrome A [Escobedia grandiflora]
Length = 619
Score = 960 bits (2482), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/619 (73%), Positives = 527/619 (85%), Gaps = 13/619 (2%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGSL+IDFEPVKP+EVPMTAAGALQSYKLAAKAI RLQ+LPSG++ERL
Sbjct: 1 SGKPFYAIIHRVTGSLVIDFEPVKPHEVPMTAAGALQSYKLAAKAIARLQALPSGNLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM+QEVFELTGYDRVM YKFH+DDHGEV +EI++ GLE Y GLHYPATDIPQAARFLF
Sbjct: 61 CETMVQEVFELTGYDRVMVYKFHDDDHGEVFTEISRPGLESYAGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCR+ HVKV+QDE DLTLCGSTLRAPHSCHL YMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRSAHVKVVQDEGPSSDLTLCGSTLRAPHSCHLHYMENMNSIASLVMSVV 180
Query: 343 VNDEEEE-------GDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVN 395
VN+ +E + P+KRKRLWGLVVCH+T+PRF+PFPLRYACEFL+QVF+IHV+
Sbjct: 181 VNEGSDEEFSASSSSTSPHPEKRKRLWGLVVCHHTSPRFIPFPLRYACEFLSQVFSIHVS 240
Query: 396 KELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRL 455
KEL L Q LEKNIL+TQT+LCDML+R PL IVTQSP +MDLVKCDGA LLYK K RL
Sbjct: 241 KELGLLNQTLEKNILKTQTMLCDMLLRGNPLAIVTQSPTVMDLVKCDGAVLLYKGKNHRL 300
Query: 456 GVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMI 515
G+ P+D Q+ DI+SWL EYH DSTG S DSL DAG+ GA ALGD CGMAA+RI+ +D +
Sbjct: 301 GLAPSDLQIRDIMSWLDEYHWDSTGTSTDSLLDAGFPGAAALGDAFCGMAAIRITGRDWL 360
Query: 516 FWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSL 575
FWFRS TA+EVRWGGA+HE ++DDGR+MHPRSSFKAFLEVVK RS+PW+D+EMDAIHSL
Sbjct: 361 FWFRSHTAAEVRWGGAEHEKGDEDDGRRMHPRSSFKAFLEVVKARSMPWRDFEMDAIHSL 420
Query: 576 QLILRNAFKDVGTLDLD------TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPI 629
QLILRNA + + I ++L +L I+G +E+EAVTSEMVRLIETA+VPI
Sbjct: 421 QLILRNACEKEMEEEERRKDMVVAGEIQARLTELHIDGAREMEAVTSEMVRLIETASVPI 480
Query: 630 LAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNI 689
LAV VDGLVNGWNTKIA+LTGL VD+AIG+ FL LVE+ S+DTV RML ALQGQEE+N+
Sbjct: 481 LAVGVDGLVNGWNTKIADLTGLLVDEAIGQPFLALVEEVSVDTVSRMLERALQGQEERNV 540
Query: 690 QFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYK 749
QFEIKTHG + PI+L+V+ACASRD+ DNVVGVCF+AQD+T ++++MDKFTRIEGDY+
Sbjct: 541 QFEIKTHGPRAESCPISLVVSACASRDVRDNVVGVCFIAQDVTTERSMMDKFTRIEGDYR 600
Query: 750 AIVQNPNPLIPPIFGSDEF 768
AIVQNPNPLIPPIFGSDEF
Sbjct: 601 AIVQNPNPLIPPIFGSDEF 619
>gi|89331113|emb|CAJ80923.1| phytochrome A [Hyobanche rubra]
Length = 618
Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/618 (73%), Positives = 523/618 (84%), Gaps = 12/618 (1%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI HRVTGSL+IDFEPVKP EVPMTAAGALQSYKLAAKAI RLQ+LPSGS+ERL
Sbjct: 1 SGKPFYAIAHRVTGSLVIDFEPVKPQEVPMTAAGALQSYKLAAKAIARLQALPSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM QEVFELTGYDRVM Y+FH+DDHGEV +EIT+ GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMAQEVFELTGYDRVMVYRFHDDDHGEVFAEITRPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
+KNKVRMI DCRA HVKV+QDE L DLTLCGS LRAPHSCHL YMENMNSIASLVM+V+
Sbjct: 121 LKNKVRMICDCRAAHVKVVQDEGLSSDLTLCGSILRAPHSCHLCYMENMNSIASLVMSVI 180
Query: 343 VNDEEEEGDNTL----PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ +E +T P KRKRLWGLVVCH+T+PRFVPFPLRYACEFL+QVFAIHV+KEL
Sbjct: 181 VNEGTDEESSTSSSSHPDKRKRLWGLVVCHHTSPRFVPFPLRYACEFLSQVFAIHVSKEL 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
EL Q LEKNIL+TQT+LCDML+R PL +VTQSP +MDL+KCDGA LLYK K RLGVT
Sbjct: 241 ELLNQTLEKNILKTQTVLCDMLLRGNPLAVVTQSPTVMDLIKCDGAVLLYKGKKHRLGVT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+D + DIV WL EYH DSTG S DSL DAG+ GA+ALGD CGMAAVRI+ D +FWF
Sbjct: 301 PSDPHIWDIVLWLDEYHRDSTGTSTDSLLDAGFPGAVALGDAFCGMAAVRITGHDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS T +EV+WGGAKHE +DD RKMHPRSSFKAFLEVVK RS+PW+D+EMDAIHSLQLI
Sbjct: 361 RSHTEAEVQWGGAKHEMGGEDDDRKMHPRSSFKAFLEVVKARSVPWRDFEMDAIHSLQLI 420
Query: 579 LRNAFKDVGTLDLD--------TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPIL 630
LRNA++ + + I ++L +L I+G +++EAVTSEMVRLIETA VPIL
Sbjct: 421 LRNAYEKEEEEEEERRRKDMVVAGEIQARLNELHIDGARDMEAVTSEMVRLIETALVPIL 480
Query: 631 AVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQ 690
A+ VDGLVNGWN KIA+LTGL VD AIGKHFL LVE++S DT RML LALQGQEE+N+Q
Sbjct: 481 AIGVDGLVNGWNAKIADLTGLPVDGAIGKHFLALVEEASADTFSRMLELALQGQEERNVQ 540
Query: 691 FEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKA 750
FEIKTHG + + PI+L+VNACASRD+ DNVVGVCF+AQD+T +++MDKFTRIEG+Y+A
Sbjct: 541 FEIKTHGPRTDFGPISLVVNACASRDVKDNVVGVCFIAQDVTTVRSMMDKFTRIEGNYRA 600
Query: 751 IVQNPNPLIPPIFGSDEF 768
IVQNPNPLIPPIFGSDEF
Sbjct: 601 IVQNPNPLIPPIFGSDEF 618
>gi|2851597|sp|P25848.3|PHY1_CERPU RecName: Full=Light-sensor Protein kinase; Includes: RecName:
Full=Phytochrome; Includes: RecName: Full=Protein kinase
gi|1839248|gb|AAB47762.1| phytochrome [Ceratodon purpureus]
Length = 1307
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/784 (59%), Positives = 591/784 (75%), Gaps = 16/784 (2%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
MS+++ SS+ + KS+HS RV AQTT DA L A +E SG S FDYS SV G
Sbjct: 1 MSATKKTYSSTTSAKSKHSVRV-AQTTADAALEAVYEMSGDSGDSFDYSKSV------GQ 53
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+ TAYL +Q+ LIQ FGC++A++E F VIAYSENA E L ++ AVPS+
Sbjct: 54 SAESVPAGAVTAYLQRMQREGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQAVPSM 113
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G+ VLGIG+DI+T+FT S++AL+KA ++SLLNPI VHC+ SGKP YAI HR+
Sbjct: 114 GEMDVLGIGTDIRTLFTPSSSAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIG 173
Query: 178 LIIDFEPVKPYEVPMTAA-GALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGY 236
++IDFE VK +VP++AA GALQS+KLAA+AITRLQ+LP G +E LCDT+++EV ELTGY
Sbjct: 174 IVIDFEAVKMIDVPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRELTGY 233
Query: 237 DRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAR 296
DRVMA+KFHED+HGEVV+EI + LEPY+GLHYPATDIPQA+RFL MKN+VR+I DC A
Sbjct: 234 DRVMAFKFHEDEHGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIADCYAS 293
Query: 297 HVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ 356
VK++QD + ++L GSTLRAPH CH QYM NM SIASLVMAV++ND EE + Q
Sbjct: 294 PVKLIQDPDIRQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRGAI-Q 352
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
+ ++LWGLVVC +T+PR VPFPLR CEFL QVF + +N +EL Q+ EK+ILRTQTLL
Sbjct: 353 RGRKLWGLVVCQHTSPRTVPFPLRSVCEFLMQVFGMQLNLHVELAAQLREKHILRTQTLL 412
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDML+RDAP+GIV+Q+PNIMDLVKCDGAAL Y ++W LG TP + Q+ +I WL E+H
Sbjct: 413 CDMLLRDAPIGIVSQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLEHHN 472
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL DA Y GA LGD VCGMAA +I+ KD +FWFRS TA+EV+WGGAKH+PD
Sbjct: 473 DSTGLSTDSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKHDPD 532
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS- 595
EKDDGRKMHPRSSFKAFLEVV RS PW+D EMDAIHSLQLILR +F+D+ D DTK+
Sbjct: 533 EKDDGRKMHPRSSFKAFLEVVNKRSPPWEDVEMDAIHSLQLILRGSFRDIA--DSDTKTM 590
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IH++L DLK++G++E A+ +EM R++ETA PILAVD G++N WN KIA++TGL V++
Sbjct: 591 IHARLNDLKLQGVEERNALANEMSRVLETAAAPILAVDSRGMINAWNAKIAQVTGLPVEE 650
Query: 656 AIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+ LV D S+ V+R+L LALQG+EEQN++ ++KT G++ + + LIVNAC S
Sbjct: 651 AMHCSLTKDLVLDESVVVVERLLSLALQGEEEQNVEIKLKTFGTQTTERAVILIVNACCS 710
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RD D VVGV FV QD+T Q+ MD+FTRI+G K VQ+P+PL+ P F DEFG +
Sbjct: 711 RDASDFVVGVFFVGQDVTEQRMFMDRFTRIQGGEKTTVQDPHPLMRPSFDGDEFGRTFKR 770
Query: 775 NPAM 778
N A+
Sbjct: 771 NSAL 774
>gi|89331109|emb|CAJ80921.1| phytochrome A [Hyobanche atropurpurea]
Length = 617
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/617 (73%), Positives = 520/617 (84%), Gaps = 11/617 (1%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI HRVTGSL+IDFEPVKP EVPMTAAGALQSYKLAA+AI RLQ+LPSGS+ERL
Sbjct: 1 SGKPFYAIAHRVTGSLVIDFEPVKPQEVPMTAAGALQSYKLAARAIARLQALPSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM QEVFELTGYDRVM Y+FH+DDHGEV +EIT+ GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CETMAQEVFELTGYDRVMVYRFHDDDHGEVFAEITRPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
+K+KVRMI DCRA HVKV+QDE L DLTLCGSTLRAPHSCHL YMENMNSIASLVM+V+
Sbjct: 121 LKSKVRMICDCRAAHVKVVQDEGLSSDLTLCGSTLRAPHSCHLCYMENMNSIASLVMSVI 180
Query: 343 VNDEEEEGDNTL----PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ +E +T P KRKRLWGLVVCH+T+PRFVPFPLRYACEFL+QVFAIHV+KEL
Sbjct: 181 VNEGTDEESSTSSSSHPDKRKRLWGLVVCHHTSPRFVPFPLRYACEFLSQVFAIHVSKEL 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
EL Q LEKNIL+TQT+LCDML+R PL +VTQSP +MDL+KCDGA LLYK K RLGVT
Sbjct: 241 ELLNQTLEKNILKTQTVLCDMLLRGNPLAVVTQSPTVMDLIKCDGAVLLYKGKKHRLGVT 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+D + DIV WL EYH DSTG S DSL DAG+ GA+ALGD CGMAAVRI+ D +FWF
Sbjct: 301 PSDPHIWDIVLWLDEYHRDSTGTSTDSLLDAGFPGAVALGDAFCGMAAVRITGHDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS T +EVRWGGAKHE +DD RKMHPRSSFKAFLEVVK RS+PW+D+EMDAIHSLQLI
Sbjct: 361 RSHTEAEVRWGGAKHEMGGEDDDRKMHPRSSFKAFLEVVKARSVPWRDFEMDAIHSLQLI 420
Query: 579 LRNAFKDVGTLDLD-------TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILA 631
LRNA + + I ++L L I+G +++EAVTSEMVRLIETA VPILA
Sbjct: 421 LRNACEKEEEEEERRRKDMVVAGEIQARLNKLHIDGARDMEAVTSEMVRLIETALVPILA 480
Query: 632 VDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQF 691
+ VDGLVNGWN KIA+LTGL VD AIG+HFL LV ++S DT RML LALQGQEE+N+QF
Sbjct: 481 IGVDGLVNGWNAKIADLTGLPVDGAIGRHFLALVGEASADTFSRMLELALQGQEERNVQF 540
Query: 692 EIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAI 751
EIKTHG + + PI+L+VNACASRD+ DNVVGVCF+AQD+T +++MDKFTRIEG+Y+A+
Sbjct: 541 EIKTHGPRTDFGPISLVVNACASRDVKDNVVGVCFIAQDVTTVRSMMDKFTRIEGNYRAL 600
Query: 752 VQNPNPLIPPIFGSDEF 768
VQNPNPLIPPIFGSDEF
Sbjct: 601 VQNPNPLIPPIFGSDEF 617
>gi|1813953|emb|CAA71838.1| photoreceptor [Ceratodon purpureus]
Length = 1299
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/776 (59%), Positives = 587/776 (75%), Gaps = 16/776 (2%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDR 65
SS+ + KS+HS RV AQTT DA L A +E SG S FDYS SV G +
Sbjct: 1 SSTTSAKSKHSVRV-AQTTADAALEAVYEMSGDSGDSFDYSKSV------GQSAESVPAG 53
Query: 66 VTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGI 125
TAYL +Q+G LIQ FGC++A++E F VIAYSENA E L ++ AVPS+G+ VLGI
Sbjct: 54 AVTAYLQRMQRGGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQAVPSMGEMDVLGI 113
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+DI+T+FT S++AL+KA ++SLLNPI VHC+ SGKP YAI HR+ ++IDFE V
Sbjct: 114 GTDIRTLFTPSSSAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDFEAV 173
Query: 186 KPYEVPMTAA-GALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKF 244
K +VP++AA GALQS+KLAA+AITRLQ+LP G +E LCDT+++EV ELTGYDRVMA+KF
Sbjct: 174 KMIDVPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRELTGYDRVMAFKF 233
Query: 245 HEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDE 304
HED+HGEVV+EI + LEPY+GLHYPATDIPQA+RFL MKN+VR+I DC A VK++QD
Sbjct: 234 HEDEHGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIADCYASPVKLIQDL 293
Query: 305 KLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGL 364
+ ++L GSTLRAPH CH QYM NM SIASLVMAV++ND EE + Q+ ++LWGL
Sbjct: 294 DIRQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRGAI-QRGRKLWGL 352
Query: 365 VVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA 424
VVC +T+PR VPFPLR CEFL QVF + +N +EL Q+ EK+ILRTQTLLCDML+RDA
Sbjct: 353 VVCQHTSPRTVPFPLRSVCEFLMQVFGMQLNLHVELGAQLREKHILRTQTLLCDMLLRDA 412
Query: 425 PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSAD 484
P+GIV+Q+PNIMDLVKCDGAAL Y ++W LG TP + Q+ +I WL E+H DSTGLS D
Sbjct: 413 PIGIVSQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLEHHNDSTGLSTD 472
Query: 485 SLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKM 544
SL DA Y GA LGD VCGMAA +I+ KD +FWFRS TA+EV+WGGAKH+PDEKDDGRKM
Sbjct: 473 SLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKHDPDEKDDGRKM 532
Query: 545 HPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDL 603
HPRSSFKAFLEVV RS PW+D EMDAIHSLQLILR +F+D+ D DTK+ IH++L DL
Sbjct: 533 HPRSSFKAFLEVVNKRSPPWEDVEMDAIHSLQLILRGSFRDIA--DSDTKTMIHARLNDL 590
Query: 604 KIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT 663
K++G++E A+ +EM R++ETA PILAVD G++N WN KIA++TGL V++A+
Sbjct: 591 KLQGVEERNALANEMSRVLETAAAPILAVDSRGMINAWNAKIAQVTGLPVEEAMHCSLTK 650
Query: 664 -LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVV 722
LV D S+ V+R+L LALQG+EEQN++ ++KT G++ + + LIVNAC SRD D VV
Sbjct: 651 DLVLDESVVVVERLLSLALQGEEEQNVEIKLKTFGTQTTERAVILIVNACCSRDASDTVV 710
Query: 723 GVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAM 778
GV FV QD+T Q+ MD+FTRI+G K VQ+P+PL+ P F DEFG + N A+
Sbjct: 711 GVFFVGQDVTEQRMFMDRFTRIQGGEKTTVQDPHPLMRPSFDGDEFGRTFKRNSAL 766
>gi|89331149|emb|CAJ80941.1| phytochrome A [Melasma scabrum]
Length = 612
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/612 (72%), Positives = 515/612 (84%), Gaps = 6/612 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAIVHRVTG L++DFEPVKP+EVPMTAAGALQSYKLAAKAI LQ+LPSGS+ERL
Sbjct: 1 SGKPFYAIVHRVTGCLVVDFEPVKPHEVPMTAAGALQSYKLAAKAIAHLQALPSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM QEVFELTGYDRVM Y+FH+DDHGEV +EIT+ GLE Y GLHYPATDIPQAAR+LF
Sbjct: 61 CETMAQEVFELTGYDRVMVYRFHDDDHGEVYAEITRPGLESYAGLHYPATDIPQAARYLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA HVKV+QDE L LTLCGSTLRAPHSCHL+YMENMNSIASLVM+VV
Sbjct: 121 MKNKVRMICDCRAAHVKVVQDEGLSSSLTLCGSTLRAPHSCHLRYMENMNSIASLVMSVV 180
Query: 343 VN---DEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELE 399
VN D E P KRKRLWGLVVCH+T+ RFVPFPLRYACEFL+QVFAIHV+KEL+
Sbjct: 181 VNEGTDGESSSSPHQPDKRKRLWGLVVCHHTSARFVPFPLRYACEFLSQVFAIHVSKELD 240
Query: 400 LEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTP 459
L Q++EK+IL+TQT+LCDML+R PL +V Q+P +MDLVKCDGA LLYK K RLG+ P
Sbjct: 241 LLNQVIEKSILKTQTVLCDMLLRGNPLAVVGQNPTVMDLVKCDGAVLLYKGKNHRLGLAP 300
Query: 460 NDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFR 519
D Q+ DIV WL++YH D+TG S DSL DAG+ GA ALGD +CGMAAVRI+ +D +FWFR
Sbjct: 301 TDPQIRDIVLWLNKYHRDTTGTSTDSLLDAGFPGAAALGDALCGMAAVRITGRDWLFWFR 360
Query: 520 SQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 579
S TA+EVRWGGAKHE ++DDGRKMHPRSSFKAFLEVVK RS+PW+D+EMDAIHSLQLIL
Sbjct: 361 SNTAAEVRWGGAKHEKGDEDDGRKMHPRSSFKAFLEVVKARSVPWRDFEMDAIHSLQLIL 420
Query: 580 RNAFKDVGTLDLD---TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDG 636
RNA + D I S+L DL I G +E+EAVT+EMVRLIE A+VPILAV VDG
Sbjct: 421 RNACEKEEERRKDVVVVGEIQSRLNDLNIYGAREMEAVTAEMVRLIEKASVPILAVGVDG 480
Query: 637 LVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
+VNGWNTKIA+LTGL +DKAIG+H L LVE++S D V RML L LQGQEEQNIQFEIKTH
Sbjct: 481 VVNGWNTKIADLTGLPMDKAIGQHLLELVEEASADAVSRMLELVLQGQEEQNIQFEIKTH 540
Query: 697 GSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPN 756
G + PI+L+VNA A++D+ N++GVCF+AQD+T ++++ DKFTRIEGDY+AIVQN N
Sbjct: 541 GPRAESGPISLVVNASATQDVKHNIIGVCFIAQDVTTERSMTDKFTRIEGDYRAIVQNRN 600
Query: 757 PLIPPIFGSDEF 768
PLIPPIFGSDEF
Sbjct: 601 PLIPPIFGSDEF 612
>gi|89331093|emb|CAJ80913.1| phytochrome A [Escobedia grandiflora]
Length = 609
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/609 (72%), Positives = 516/609 (84%), Gaps = 4/609 (0%)
Query: 164 GKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLC 223
GKPFYAIVHRVTG L++D+EPVKP+EVPMTAAGALQSYKLAAKAI RLQ+LPSGS+ERLC
Sbjct: 1 GKPFYAIVHRVTGCLVVDYEPVKPHEVPMTAAGALQSYKLAAKAIARLQALPSGSLERLC 60
Query: 224 DTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFM 283
+TM QEVFELTGYDRVM Y+FH+DDHGEV +EIT+ GLE Y+GLHYPATDIPQAAR+LFM
Sbjct: 61 ETMAQEVFELTGYDRVMVYRFHDDDHGEVFAEITRRGLESYVGLHYPATDIPQAARYLFM 120
Query: 284 KNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 343
KNKVRMI DCRA HVKV+ DE L + LCGSTLRAPHSCHL+YMENMNSIASLVM+VVV
Sbjct: 121 KNKVRMICDCRAAHVKVVLDEDLSSSINLCGSTLRAPHSCHLRYMENMNSIASLVMSVVV 180
Query: 344 N---DEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
N DEE + P KRKRLWGLVVCH+T+ RFVPFPLRYACEFL+QVFAIHV+KEL+L
Sbjct: 181 NEGTDEESASSSHHPDKRKRLWGLVVCHHTSARFVPFPLRYACEFLSQVFAIHVSKELDL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
Q +EKNIL+TQT+LCDML+R PL IV Q+P +MDLVKC+GA LLYK K RLG+ P
Sbjct: 241 LNQAIEKNILKTQTVLCDMLLRGNPLAIVAQNPTVMDLVKCNGAVLLYKGKNHRLGLAPT 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
D Q+ DIV WL EYH D+TG S DSL DAG+ GA ALGD CGMAAVRI+ +D +FWFRS
Sbjct: 301 DPQIRDIVLWLDEYHRDTTGTSTDSLLDAGFPGAAALGDAFCGMAAVRITGRDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA+EVRWGGAKHE ++DD RKMHPRSSFKAFLEVVK RS+PW+D+EMDAIHSLQLILR
Sbjct: 361 NTAAEVRWGGAKHEKGDEDDVRKMHPRSSFKAFLEVVKARSVPWRDFEMDAIHSLQLILR 420
Query: 581 NAFKDVGTLD-LDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
NA ++ D + I S+L +L G++E+EAVT+EMVRLIE A+VPILAV VDG+VN
Sbjct: 421 NACEEERRKDVVVVGEIQSRLNELDSYGVREMEAVTAEMVRLIEKASVPILAVGVDGVVN 480
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWN KIA+LTGL +DKAIG+H L LVE++S D V RML L LQGQEE+NIQFEIKTHG +
Sbjct: 481 GWNNKIADLTGLPLDKAIGQHLLELVEEASADAVSRMLELVLQGQEERNIQFEIKTHGPR 540
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
I PI+L+VNACA+RD+ N++G+CF+AQD+T ++++ DKFTRIEGDY+AIVQNPNPLI
Sbjct: 541 IESGPISLVVNACATRDVKHNIIGLCFIAQDVTTERSMTDKFTRIEGDYRAIVQNPNPLI 600
Query: 760 PPIFGSDEF 768
PPIFGSDEF
Sbjct: 601 PPIFGSDEF 609
>gi|296083241|emb|CBI22877.3| unnamed protein product [Vitis vinifera]
Length = 982
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/1056 (46%), Positives = 655/1056 (62%), Gaps = 161/1056 (15%)
Query: 3 SSRPAQSSSNTG-KSRHS---ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGD 58
S AQSS + + H+ ++ IAQ T+DA+LHA
Sbjct: 10 SHHQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHA------------------------ 45
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
QQ TAYL IQ+G IQPFGC+LA+DE TF+VIA+SENA E+L + +VPS+
Sbjct: 46 QQ------ITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTPQSVPSLE 99
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++T+FT SA L+KA G E++LLNP+ +H K SGKPFYAI+HR+ +
Sbjct: 100 KPEILLVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVGI 159
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA
Sbjct: 160 VIDLEPARTEDPALSIAGA----------------------------------------- 178
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
D+HGEVV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 179 --------DEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHATPV 230
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QDE L L L GSTLRAPH CH QYM NM S ASL MA
Sbjct: 231 LVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMA------------------ 272
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
FL Q F + +N EL+L Q+ EK++LRTQTLLCD
Sbjct: 273 --------------------------FLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCD 306
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
ML+RD+P GIVTQSP+IMDLVKCDGAAL + K + GVTP + Q+ DI WL H DS
Sbjct: 307 MLLRDSPTGIVTQSPSIMDLVKCDGAALYCQGKYYPTGVTPTEAQIKDIAEWLLANHADS 366
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEK 538
TGLS DSL DAGY GA +LGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++K
Sbjct: 367 TGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGGAKHHPEDK 426
Query: 539 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHS 598
DDG++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++FKD +H+
Sbjct: 427 DDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGSNSKAVMHA 486
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
+L +L+++GM EL +V EM LTGLSV++A+G
Sbjct: 487 QLGELELQGMDELSSVAREM-----------------------------LTGLSVEEAMG 517
Query: 659 KHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
K + LV S +TV ++L+ ALQG+E++N++ +++T S+ + + ++VNAC+SRD
Sbjct: 518 KSLVHDLVYKESEETVDKLLHHALQGEEDKNVEIKLRTFDSQQHKKAVFVVVNACSSRDY 577
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPA 777
+N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF SDE C EWN A
Sbjct: 578 TNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVCSEWNTA 637
Query: 778 MVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGF 837
M KLTGW R ++I K+L+ E+FG++ CRLK +A IVL+ A+ GQD +K PF F
Sbjct: 638 MEKLTGWSRGDIIGKMLVGEIFGSS---CRLKGPDALTKFMIVLHNAIGGQDTDKFPFSF 694
Query: 838 FARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALA 897
F +NGKY + LL NK+++ EG + G FCFLQ+AS ELQQAL VQR E+ R+K LA
Sbjct: 695 FDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFARMKELA 754
Query: 898 YTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYL 957
Y ++I+NPLSGI F+ ++E T+L +QK+ L TSA C++Q+ KI+ D DLDSI DG L
Sbjct: 755 YICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSIEDGSL 814
Query: 958 DLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLS 1017
+LE EF L V+ A +SQVM+ + ++++ + E++ + +YGD +R+QQVLADFL
Sbjct: 815 ELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVRIQQVLADFLL 874
Query: 1018 ISINFVPN-GGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+ + P+ G + + Q+ + V L ++E R
Sbjct: 875 NMVRYAPSPDGWIEIQVHPRLKQISEEVKLMHIEFR 910
>gi|89331085|emb|CAJ80909.1| phytochrome A [Cycnium adonense]
Length = 617
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/617 (70%), Positives = 514/617 (83%), Gaps = 11/617 (1%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRV G LIIDFEPVKP+EVPMTAAGALQSYKLAAKAI RLQ LPSGS+ERL
Sbjct: 1 SGKPFYAIIHRVAGGLIIDFEPVKPHEVPMTAAGALQSYKLAAKAIARLQGLPSGSLERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
C+TM QEVFELTGYDRVM Y+FH+DDHGEV E+T+ GLE Y G HYPATDIPQAARFLF
Sbjct: 61 CETMAQEVFELTGYDRVMVYRFHDDDHGEVFVEVTRPGLETYAGPHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
+KNKVRMI DCRA HVKV+++E D+ LCGSTLRAPH CHL+YMENMNSIASLVM+VV
Sbjct: 121 IKNKVRMICDCRATHVKVVEEEGHSSDINLCGSTLRAPHGCHLRYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL----PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 398
VN+ EE ++ P KRK+LWGLVVCH+T+PRFVPFPLRYACEFL+QVFAIHV KEL
Sbjct: 181 VNEGNEEESSSDSSSHPGKRKQLWGLVVCHHTSPRFVPFPLRYACEFLSQVFAIHVGKEL 240
Query: 399 ELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVT 458
EL+ Q LEK IL+TQT+LCDML+R PL IVT+SP +MDLVKCDGA LYK K RLG+
Sbjct: 241 ELQNQSLEKKILKTQTVLCDMLLRGEPLAIVTRSPTVMDLVKCDGAVFLYKGKKHRLGLA 300
Query: 459 PNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWF 518
P+D Q+ DIVSWL EYH DSTGLS +SL DAG+ GA ALGD CGMAAVRI+ +D +FWF
Sbjct: 301 PSDLQIRDIVSWLDEYHQDSTGLSTNSLRDAGFPGAAALGDAFCGMAAVRITVRDWLFWF 360
Query: 519 RSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 578
RS T +EVRWGGAK E + DDGR+MHPRSSFKAFLEVVK+RS+PW+D+EMDA+HSLQLI
Sbjct: 361 RSHTEAEVRWGGAKQEKGDADDGRRMHPRSSFKAFLEVVKSRSVPWRDFEMDAVHSLQLI 420
Query: 579 LRNAFKDVGTLDLD-------TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILA 631
LRNA + + I KL +L I+G +E+EAVTSEMVRLIETA+VPILA
Sbjct: 421 LRNACEKEEENEEKRRNDIVVAGEIQEKLNELHIDGAREMEAVTSEMVRLIETASVPILA 480
Query: 632 VDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQF 691
V VDGLVNGWNTKIA+LTG+ +++A+G++F+ VE++S D VKR+L LAL+GQEE+N+QF
Sbjct: 481 VGVDGLVNGWNTKIADLTGMPMERALGQNFMDFVEEASADAVKRVLELALEGQEERNVQF 540
Query: 692 EIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAI 751
EIKTHG + PI+L+VNACASRD+ DNVVGVCF+A D+T ++++MDKFTRIEGDY+AI
Sbjct: 541 EIKTHGPRAESGPISLVVNACASRDIKDNVVGVCFIAHDVTTERSMMDKFTRIEGDYRAI 600
Query: 752 VQNPNPLIPPIFGSDEF 768
V NPN LIPPIFG DEF
Sbjct: 601 VHNPNQLIPPIFGLDEF 617
>gi|89331115|emb|CAJ80924.1| phytochrome A [Hyobanche sanguinea]
Length = 594
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/594 (72%), Positives = 503/594 (84%), Gaps = 12/594 (2%)
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
PYEVPMTAAGALQSYKLAAK I RLQ++PSGS+ERLC+TM QEVFELTGYDRVM Y+FH+
Sbjct: 1 PYEVPMTAAGALQSYKLAAKGIARLQAMPSGSLERLCETMAQEVFELTGYDRVMVYRFHD 60
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
D+HGEV +EIT+ GLEPY GLHYPATDIPQAARFLFMKNKVRMI DCRA HVKV+Q+E L
Sbjct: 61 DNHGEVFTEITRPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRAAHVKVVQEESL 120
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL-------PQKRK 359
DLTLCGSTLRAPHSCHL+YMENMNSIASLVM+VVVN+ +E + P +RK
Sbjct: 121 SSDLTLCGSTLRAPHSCHLRYMENMNSIASLVMSVVVNEGTDEESSASSSSSSSHPYRRK 180
Query: 360 RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDM 419
+LWGLVVCH+T+PRFVPFPLRYACEFL+QVFAIH++KELEL Q LEKNIL+TQT+LCDM
Sbjct: 181 QLWGLVVCHHTSPRFVPFPLRYACEFLSQVFAIHISKELELLNQTLEKNILKTQTVLCDM 240
Query: 420 LMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDST 479
L+R PL IVT+SP +MDLVKCDGA LLYK K RLG+ P+D Q+ DIVSWL EYH DST
Sbjct: 241 LLRGNPLSIVTRSPTVMDLVKCDGAVLLYKGKNHRLGLAPSDLQIRDIVSWLDEYHRDST 300
Query: 480 GLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKD 539
G S DSL DAG+ GA LG+ CGMAAVRI+ +D +FWFRS TA+EVRWGGAKHE ++D
Sbjct: 301 GTSTDSLLDAGFPGAGLLGNAFCGMAAVRITGRDWLFWFRSHTAAEVRWGGAKHEKGDED 360
Query: 540 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD-----TK 594
DGR+MHPRSSFKAFLEVVK RS+ W+D+EMDAIHSLQLILRNA + D +
Sbjct: 361 DGRRMHPRSSFKAFLEVVKARSMQWRDFEMDAIHSLQLILRNACEKEEEEDRRKDMVVAR 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
I ++L +L I+G KE+E VTSEMVRLIETA+VPILAV VDGLVNGWNTKIA+LTGL VD
Sbjct: 421 EIQARLNELHIDGAKEMETVTSEMVRLIETASVPILAVGVDGLVNGWNTKIADLTGLPVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
AIG+HFL LVE++S+D V+RML LALQGQEEQN+QFEIKTHG + +PI+LIVN CAS
Sbjct: 481 GAIGRHFLALVEEASVDVVRRMLELALQGQEEQNVQFEIKTHGPRTESNPISLIVNPCAS 540
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
RD+ DNVVGVCF+AQD+T +++++DKFTRIEGDY+AIVQNPNPLIPP FGSDEF
Sbjct: 541 RDVKDNVVGVCFIAQDVTTERSMIDKFTRIEGDYQAIVQNPNPLIPPFFGSDEF 594
>gi|89331033|emb|CAJ80883.1| phytochrome A [Aureolaria pedicularia]
Length = 524
Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/524 (82%), Positives = 480/524 (91%), Gaps = 3/524 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAI+HRVTGS+IIDFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERL
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK GLEPY+GLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
+KNKVRMI DCRA HVKV+QD+KLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDKLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 343 VNDEEEEGDNTL--PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
VN+ E+G ++ P K+KRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKQKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
E Q+LEKNILRTQTLLCDML+RDAPLGIV+QSPN+MDLVKCDGA L+YK K +RLG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGMTPS 300
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
DFQ+ DIVSWL EYH DSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ D +FWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA+E+RWGGAKHEP EKDDGRKMHPR SFKAFLEVVKTRSLPWKD+EMDAIHSLQLILR
Sbjct: 361 HTAAEIRWGGAKHEPGEKDDGRKMHPRLSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 581 NAF-KDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
NA K+ D+D K IH++L DL+++G++ELEAVTSEMVRLIETA+VPI AVDVDGLVN
Sbjct: 421 NASNKEAEERDVDGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVN 480
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQG 683
GWNTKIA+LTGL VDKAIG+HFL LVEDSS + V +ML LALQG
Sbjct: 481 GWNTKIADLTGLPVDKAIGRHFLALVEDSSAEAVNKMLELALQG 524
>gi|89330132|emb|CAJ80978.1| phytochrome A [Sopubia cana]
Length = 614
Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/614 (69%), Positives = 513/614 (83%), Gaps = 12/614 (1%)
Query: 167 FYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM 226
FYAI+HRVTG ++IDFEPVKP+EVPMTAAGALQSYK+AAKAI RLQ+LP+GS+ERLC TM
Sbjct: 1 FYAIIHRVTGCIVIDFEPVKPHEVPMTAAGALQSYKMAAKAIARLQALPNGSLERLCQTM 60
Query: 227 IQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNK 286
QEVFELTGYDRVM Y+FH+DDHGEV +EITK GLEPYLGLHYPA DIPQAARFLFMKNK
Sbjct: 61 AQEVFELTGYDRVMVYRFHDDDHGEVFAEITKPGLEPYLGLHYPAIDIPQAARFLFMKNK 120
Query: 287 VRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDE 346
VRMI DCRA VKV+QDE L DLTLCGSTLRAPHSCHL+YMENMNSIASLVM+VV+N+
Sbjct: 121 VRMIWDCRANRVKVVQDEALSSDLTLCGSTLRAPHSCHLRYMENMNSIASLVMSVVINEG 180
Query: 347 EEEGDNTLP-----QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 401
+E KR R+WGLVVCH+T+PRF+PFPLRYACEFL+QVFAIHV KELEL+
Sbjct: 181 TDEDSPISSSPSHPDKRIRIWGLVVCHHTSPRFIPFPLRYACEFLSQVFAIHVTKELELQ 240
Query: 402 YQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPND 461
Q+LEK+IL+TQT+LC+ML+R +PL IVTQSP +MDL+KCDG+ LLYK + RLG+ P++
Sbjct: 241 NQMLEKSILKTQTVLCNMLLRGSPLSIVTQSPTVMDLIKCDGSILLYKGTMHRLGMAPSE 300
Query: 462 FQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQ 521
Q+ DI+SWL EYH DSTG+S DSL +AG+ GA ALGD CGMAAVRI+ +D +FWFR+
Sbjct: 301 LQIQDIISWLDEYHSDSTGMSTDSLLEAGFPGAAALGDAFCGMAAVRITVRDWLFWFRAH 360
Query: 522 TASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 581
TA+EVRWGGAKHE +++DDGR+MHPRSSFKAF EVVK RS+ W+D+EMDAIH+LQLILR+
Sbjct: 361 TAAEVRWGGAKHEKEDEDDGRRMHPRSSFKAFREVVKARSVLWRDFEMDAIHTLQLILRS 420
Query: 582 AFKDVGTLD-------LDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDV 634
+ + + I ++L ++ I G KE++AV SEMVRLIE A+VPILAV V
Sbjct: 421 VCEKEEEEERERRKDVVVAGEIEARLNEMHINGAKEMDAVISEMVRLIEMASVPILAVGV 480
Query: 635 DGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIK 694
+ +VNGWNTKIA+LTGL VD AIG+ FL L+E+ S D V+RML LALQGQEE+N+QFEIK
Sbjct: 481 NRMVNGWNTKIADLTGLPVDGAIGRQFLELIEEDSADVVRRMLELALQGQEERNVQFEIK 540
Query: 695 THGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQN 754
THG + N I+L+VNAC +RD+ DN+VGV F+AQD+T ++++MDKFTRIEGDY+AIVQN
Sbjct: 541 THGPRANSGSISLVVNACTNRDVEDNIVGVVFIAQDVTTERSMMDKFTRIEGDYRAIVQN 600
Query: 755 PNPLIPPIFGSDEF 768
PNPLIPPIFG DEF
Sbjct: 601 PNPLIPPIFGLDEF 614
>gi|89331111|emb|CAJ80922.1| phytochrome A [Hyobanche glabrata]
Length = 596
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/596 (72%), Positives = 502/596 (84%), Gaps = 14/596 (2%)
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
PYEVPMTAAGALQSYKLAAK I RLQ++PSGS+ERLC+TM QEVFELTGYDRVM Y+FH+
Sbjct: 1 PYEVPMTAAGALQSYKLAAKGIARLQAMPSGSLERLCETMAQEVFELTGYDRVMVYRFHD 60
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
D+HGEV +EIT+ GLEPY GLHYPATDIPQAARFLFMKNKVRMI DCRA HVKV+Q+E L
Sbjct: 61 DNHGEVFTEITRPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRAAHVKVVQEESL 120
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL---------PQK 357
DLTLCGSTLRAPHSCHL+YMENMNSIASLVM+VVVN+ +E + P +
Sbjct: 121 SSDLTLCGSTLRAPHSCHLRYMENMNSIASLVMSVVVNEGTDEESSASSSSSSSSSHPYR 180
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK+LWGLVVCH+T+PRFVPFPLRYACEFL+QVFAIH++KELEL Q LEKNIL+TQT+LC
Sbjct: 181 RKQLWGLVVCHHTSPRFVPFPLRYACEFLSQVFAIHISKELELLNQTLEKNILKTQTVLC 240
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+R PL IVT+SP +MDLVKCDGA LLYK K RLG+ P+D Q+ DIVSWL EYH D
Sbjct: 241 DMLLRGNPLSIVTRSPTVMDLVKCDGAVLLYKGKNHRLGLAPSDLQIRDIVSWLDEYHRD 300
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STG S SL DAG+ GA LG+ CGMAAVRI+ +D +FWFRS TA+EVRWGGAKHE +
Sbjct: 301 STGTSTGSLLDAGFPGAGLLGNAFCGMAAVRITGRDWLFWFRSHTAAEVRWGGAKHEKGD 360
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD----- 592
+DDGR+MHPRSSFKAFLEVVK RS+ W+D+EMDAIHSLQLILRNA + D
Sbjct: 361 EDDGRRMHPRSSFKAFLEVVKARSVQWRDFEMDAIHSLQLILRNACEKEEEEDRRKDMVV 420
Query: 593 TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLS 652
+ I ++L +L I+G KE+E VTSEMVRLIETA+VPILAV VDGLVNGWNTKIA+LTGL
Sbjct: 421 AREIQARLNELHIDGAKEMETVTSEMVRLIETASVPILAVGVDGLVNGWNTKIADLTGLP 480
Query: 653 VDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNAC 712
VD AIG+HFL LVE++S+D V+RML LALQGQEEQN+QFEIKTHG + +PI+LIVN C
Sbjct: 481 VDGAIGRHFLALVEEASVDVVRRMLELALQGQEEQNVQFEIKTHGPRTESNPISLIVNPC 540
Query: 713 ASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
ASRD+ DNVVGVCF+AQD+T +++++DKFTRIEGDY+AIVQNPNPLIPP FGSDEF
Sbjct: 541 ASRDVKDNVVGVCFIAQDVTTERSMIDKFTRIEGDYQAIVQNPNPLIPPFFGSDEF 596
>gi|13383412|gb|AAK20969.1| phytochrome A [Houttuynia cordata]
Length = 578
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/579 (74%), Positives = 503/579 (86%), Gaps = 10/579 (1%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAIVHRVTGSLIIDFEPVKP+EVPMTAAGALQSYKLAAKAI+RLQSLPSGSMERL
Sbjct: 1 SGKPFYAIVHRVTGSLIIDFEPVKPFEVPMTAAGALQSYKLAAKAISRLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
DTM+QEVFELTGYDRVMAYKFHEDDHGEV+SE+T L+PYLGLHYPATDIPQAARFLF
Sbjct: 61 IDTMVQEVFELTGYDRVMAYKFHEDDHGEVISEVTIPHLDPYLGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA+ VKV QD+KL FDLTLCGSTLRAPHSCHLQYMENM SIASLVMAVV
Sbjct: 121 MKNKVRMICDCRAKPVKVYQDDKLSFDLTLCGSTLRAPHSCHLQYMENMGSIASLVMAVV 180
Query: 343 VND--EEEEG---DNTLPQ----KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIH 393
VN+ EE+ G D++ Q +RK+LWGLVVCHNT PRFVPFPLRYACEFL QVFAIH
Sbjct: 181 VNEGGEEDRGGPADSSQQQLGRYRRKKLWGLVVCHNTRPRFVPFPLRYACEFLTQVFAIH 240
Query: 394 VNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIW 453
V+KELELE K ILRTQTLLCDML+RDAP+GIV Q+PNIMDL+KCDGAAL YK+K++
Sbjct: 241 VSKELELEETNSRKEILRTQTLLCDMLLRDAPMGIVNQTPNIMDLIKCDGAALFYKDKVF 300
Query: 454 RLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKD 513
RLG+ P++ + +I WLS YHMDSTGLS DSL+DAGY A LGD+VCGMAAV+I+ D
Sbjct: 301 RLGIAPSETDIREIAQWLSAYHMDSTGLSTDSLHDAGYPKAAFLGDLVCGMAAVKITCSD 360
Query: 514 MIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIH 573
M+FWFR+ TA+E+RWGGAKH+ ++DDG++MHPRSSF+AFL+VVKTRSLPWKDYEMD IH
Sbjct: 361 MLFWFRTHTAAEIRWGGAKHDHSDRDDGKRMHPRSSFRAFLDVVKTRSLPWKDYEMDGIH 420
Query: 574 SLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVD 633
SLQLILR + K+ +D K IH++L DLK++ M EL AVT+E+VRLIETATVPILAVD
Sbjct: 421 SLQLILRTSVKEPEQVD-SNKVIHAQLGDLKLDEMNELHAVTTEVVRLIETATVPILAVD 479
Query: 634 VDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEI 693
V GL+NGWN KI+ELTG+S+++ + KH LTLVED SI+ V+RML LAL+G+EEQNI+F++
Sbjct: 480 VXGLINGWNAKISELTGMSLEQVMXKHLLTLVEDCSINVVRRMLCLALKGEEEQNIEFQV 539
Query: 694 KTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
KTHG++ + P+ L+VNACASRD+H NVVGVCFV QD+T
Sbjct: 540 KTHGTRSDHGPVVLVVNACASRDVHGNVVGVCFVXQDVT 578
>gi|400480|emb|CAA52883.1| phytochrome [Psilotum nudum]
Length = 794
Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/725 (59%), Positives = 554/725 (76%), Gaps = 8/725 (1%)
Query: 333 SIASLVMAVVVNDEEEE--GDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF 390
SI SLVMAV+VND + E G P+ R RLWG+VVCH+TTPR VPF LR ACEFL QVF
Sbjct: 2 SIGSLVMAVIVNDNDAEPSGRGNQPKNR-RLWGMVVCHHTTPRAVPFSLRSACEFLMQVF 60
Query: 391 AIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKN 450
+ +N E+EL Q+ EK+ILRTQTLLCDML+RDAP+GIVTQSPNIMDLVKCDGAAL Y
Sbjct: 61 GLQLNMEIELAAQMREKHILRTQTLLCDMLLRDAPIGIVTQSPNIMDLVKCDGAALYYGK 120
Query: 451 KIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRIS 510
K W LG TP + Q+ D+ WL + H DSTGLS +SL DAG+ GA ALGD VCGMAAV+I+
Sbjct: 121 KFWLLGTTPTEAQIKDLADWLLDVHRDSTGLSTESLADAGFPGAAALGDAVCGMAAVKIT 180
Query: 511 PKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMD 570
P+D +FWFRS TA E++WGGAKH PD+KDDG+KMHPRSSFKAFLEVVK RS PW+D EMD
Sbjct: 181 PRDYLFWFRSHTAKEIKWGGAKHNPDDKDDGKKMHPRSSFKAFLEVVKWRSSPWEDVEMD 240
Query: 571 AIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPI 629
A+HSLQLILR +F+D+ D ++K+ IH +L DL + GM EL V +EMVRL+ETAT PI
Sbjct: 241 AVHSLQLILRGSFQDID--DSESKTMIHHRLNDLNLHGMDELSTVANEMVRLMETATAPI 298
Query: 630 LAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQN 688
LAVD G +NGWN K AELTGL ++ A+ K + LV D S+ TV+R+LYLALQG+EE+N
Sbjct: 299 LAVDSSGFINGWNGKAAELTGLPLEDAMNKSLVRDLVVDESVSTVERLLYLALQGEEERN 358
Query: 689 IQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDY 748
++ ++KT G++ + P+ L+VNACASR++ NVVGVCFV QD+T +K VMDKFTRI+GDY
Sbjct: 359 VEIKLKTFGTQADKGPVILVVNACASRNITANVVGVCFVGQDVTGEKVVMDKFTRIQGDY 418
Query: 749 KAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRL 808
+ IVQ+PNPLIPPIFGSDEFG+C EWNPAMVKL+GWK EEV+ K+ + E+FG+ MACCRL
Sbjct: 419 RTIVQSPNPLIPPIFGSDEFGYCSEWNPAMVKLSGWKMEEVLGKMNVGEIFGSEMACCRL 478
Query: 809 KNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFL 868
+ Q+A IVLN AM GQD ++ P GFF R GKY E LL NK+ D GA+TGVFCFL
Sbjct: 479 RGQDAMTKFMIVLNSAMGGQDSDRFPLGFFDRQGKYVEALLIANKRTDGAGAITGVFCFL 538
Query: 869 QLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKR 928
+AS E+QQAL VQ+ S +TAL +LK +AY +++IRNPL GI+F+R+++EGT L EQK+
Sbjct: 539 HIASAEVQQALQVQKRSARTALDKLKEVAYMRQEIRNPLYGIMFTRRLLEGTNLSEEQKQ 598
Query: 929 LLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRI 988
++ TSA C++QLH+ILD+ + +++ G +DL+ +EFT+ V+ A ISQ M++S KG+++
Sbjct: 599 IIDTSAVCEKQLHQILDEDNFENLDHGNIDLDTIEFTMGTVMDAVISQGMIRSREKGLQL 658
Query: 989 VNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNG-GQLMVSSSLTKDQLGQSVHLA 1047
+ ET I + LYGD +RLQQVLADFL+ ++ F + G + + T LG +H+
Sbjct: 659 IRETPVDIKNMRLYGDQLRLQQVLADFLTTAVRFTSSSDGWVGIKVVPTMKGLGGGLHVM 718
Query: 1048 YLELR 1052
+ R
Sbjct: 719 RFDYR 723
>gi|345424448|gb|AEN85328.1| phytochrome A, partial [Erucastrum cardaminoides]
Length = 522
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/522 (84%), Positives = 481/522 (92%), Gaps = 6/522 (1%)
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFH+DDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HV+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG--DNTL---P 355
LQD+KL DLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+EE++ D+T P
Sbjct: 121 LQDDKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEDDAAPDSTTTAQP 180
Query: 356 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTL 415
QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNILRTQTL
Sbjct: 181 QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 416 LCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYH 475
LCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK K+W+LG+TP+D+ L +I +WL +YH
Sbjct: 241 LCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKEKVWKLGITPSDYHLQEIATWLCDYH 300
Query: 476 MDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP 535
DSTGLS DSL+DAG+ A ALGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+P
Sbjct: 301 TDSTGLSTDSLHDAGFPRASALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 536 DEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGT-LDLDTK 594
D++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK
Sbjct: 361 DDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETATDVNTK 420
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
IHSKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAEL GLSVD
Sbjct: 421 IIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELPGLSVD 480
Query: 655 KAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTH 696
+AIGKH LTLVEDSS++ VKRML AL+G EEQN+QFEIKTH
Sbjct: 481 EAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTH 522
>gi|156752811|gb|ABU94151.1| phytochrome N [Pinus sylvestris]
gi|156752813|gb|ABU94152.1| phytochrome N [Pinus sylvestris]
gi|156752815|gb|ABU94153.1| phytochrome N [Pinus sylvestris]
gi|156752817|gb|ABU94154.1| phytochrome N [Pinus sylvestris]
gi|156752819|gb|ABU94155.1| phytochrome N [Pinus sylvestris]
gi|156752821|gb|ABU94156.1| phytochrome N [Pinus sylvestris]
gi|156752823|gb|ABU94157.1| phytochrome N [Pinus sylvestris]
gi|156752827|gb|ABU94159.1| phytochrome N [Pinus sylvestris]
gi|156752829|gb|ABU94160.1| phytochrome N [Pinus sylvestris]
gi|156752831|gb|ABU94161.1| phytochrome N [Pinus sylvestris]
gi|156752833|gb|ABU94162.1| phytochrome N [Pinus sylvestris]
gi|156752835|gb|ABU94163.1| phytochrome N [Pinus sylvestris]
gi|156752837|gb|ABU94164.1| phytochrome N [Pinus sylvestris]
gi|156752839|gb|ABU94165.1| phytochrome N [Pinus sylvestris]
gi|156752841|gb|ABU94166.1| phytochrome N [Pinus sylvestris]
gi|156752843|gb|ABU94167.1| phytochrome N [Pinus sylvestris]
gi|156752845|gb|ABU94168.1| phytochrome N [Pinus sylvestris]
gi|156752847|gb|ABU94169.1| phytochrome N [Pinus sylvestris]
gi|156752851|gb|ABU94171.1| phytochrome N [Pinus sylvestris]
gi|156752855|gb|ABU94173.1| phytochrome N [Pinus sylvestris]
gi|156752857|gb|ABU94174.1| phytochrome N [Pinus sylvestris]
gi|156752859|gb|ABU94175.1| phytochrome N [Pinus sylvestris]
gi|156752861|gb|ABU94176.1| phytochrome N [Pinus sylvestris]
gi|156752863|gb|ABU94177.1| phytochrome N [Pinus sylvestris]
gi|156752867|gb|ABU94179.1| phytochrome N [Pinus sylvestris]
gi|156752871|gb|ABU94181.1| phytochrome N [Pinus sylvestris]
gi|156752873|gb|ABU94182.1| phytochrome N [Pinus sylvestris]
gi|156752875|gb|ABU94183.1| phytochrome N [Pinus sylvestris]
gi|156752877|gb|ABU94184.1| phytochrome N [Pinus sylvestris]
gi|156752883|gb|ABU94187.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/613 (68%), Positives = 500/613 (81%), Gaps = 3/613 (0%)
Query: 280 FLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM 339
FLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM SIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 340 AVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE 397
AVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF I +NKE
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 398 LELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGV 457
+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+ W LGV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 458 TPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFW 517
TP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+ KD +FW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 578 ILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGL 637
ILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PILAVD G+
Sbjct: 301 ILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGV 359
Query: 638 VNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHG 697
VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q E+K HG
Sbjct: 360 VNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQIELKRHG 419
Query: 698 SKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNP 757
S+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+AIVQNP+P
Sbjct: 420 SEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSP 479
Query: 758 LIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNL 817
LIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK Q A L
Sbjct: 480 LIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQL 539
Query: 818 GIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQ 877
I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +AS ELQQ
Sbjct: 540 RIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQ 599
Query: 878 ALHVQRLSEQTAL 890
AL+VQ + EQ A+
Sbjct: 600 ALYVQHMLEQAAM 612
>gi|156752853|gb|ABU94172.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/613 (68%), Positives = 500/613 (81%), Gaps = 3/613 (0%)
Query: 280 FLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM 339
FLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM SIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 340 AVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE 397
AVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF I +NKE
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 398 LELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGV 457
+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+ W LG+
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGI 180
Query: 458 TPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFW 517
TP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+ KD +FW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 578 ILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGL 637
ILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PILAVD G+
Sbjct: 301 ILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGV 359
Query: 638 VNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHG 697
VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q E+K HG
Sbjct: 360 VNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQIELKRHG 419
Query: 698 SKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNP 757
S+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+AIVQNP+P
Sbjct: 420 SEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSP 479
Query: 758 LIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNL 817
LIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK Q A L
Sbjct: 480 LIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQL 539
Query: 818 GIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQ 877
I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +AS ELQQ
Sbjct: 540 RIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQ 599
Query: 878 ALHVQRLSEQTAL 890
AL+VQ + EQ A+
Sbjct: 600 ALYVQHMLEQAAM 612
>gi|156752885|gb|ABU94188.1| phytochrome N [Pinus pinaster]
Length = 612
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/613 (68%), Positives = 500/613 (81%), Gaps = 3/613 (0%)
Query: 280 FLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM 339
FLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM SIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 340 AVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE 397
AVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF I +NKE
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 398 LELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGV 457
+EL Q+ EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+ W LG
Sbjct: 121 VELAAQMREKRILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEGNFWLLGA 180
Query: 458 TPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFW 517
TP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+ KD +FW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 578 ILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGL 637
ILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PILAVD G+
Sbjct: 301 ILRGSCKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGV 359
Query: 638 VNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHG 697
VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q E+K HG
Sbjct: 360 VNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQIELKRHG 419
Query: 698 SKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNP 757
S+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QKTVMDKFTRI+GDY+AIVQNP+P
Sbjct: 420 SEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKTVMDKFTRIQGDYRAIVQNPSP 479
Query: 758 LIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNL 817
LIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK Q A L
Sbjct: 480 LIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQL 539
Query: 818 GIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQ 877
I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +AS ELQQ
Sbjct: 540 RIILNSSMAGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQ 599
Query: 878 ALHVQRLSEQTAL 890
AL+VQ + EQ A+
Sbjct: 600 ALYVQHMLEQAAM 612
>gi|156752869|gb|ABU94180.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/613 (68%), Positives = 499/613 (81%), Gaps = 3/613 (0%)
Query: 280 FLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM 339
FLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM SIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 340 AVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE 397
AVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF I +NKE
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 398 LELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGV 457
+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+ W LGV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 458 TPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFW 517
TP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+ KD +FW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 578 ILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGL 637
ILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PILAVD G+
Sbjct: 301 ILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGV 359
Query: 638 VNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHG 697
VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q E+K HG
Sbjct: 360 VNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQIELKRHG 419
Query: 698 SKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNP 757
S+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+AIVQNP+P
Sbjct: 420 SEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSP 479
Query: 758 LIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNL 817
LIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK Q A L
Sbjct: 480 LIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQL 539
Query: 818 GIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQ 877
I+LN +M+GQ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +AS ELQQ
Sbjct: 540 RIILNSSMTGQGTEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQ 599
Query: 878 ALHVQRLSEQTAL 890
AL+VQ + EQ A+
Sbjct: 600 ALYVQHMLEQAAM 612
>gi|156752825|gb|ABU94158.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/613 (68%), Positives = 500/613 (81%), Gaps = 3/613 (0%)
Query: 280 FLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM 339
FLFM+N+VRMI DC A+ V V+QDE+LP DL+ CGSTLRAPH CH QYM NM SIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERLPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 340 AVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE 397
AVV+N+++ +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF I +NKE
Sbjct: 61 AVVINEKKLDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 398 LELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGV 457
+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+ W LGV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 458 TPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFW 517
TP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+ KD +FW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 578 ILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGL 637
ILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PILAVD G+
Sbjct: 301 ILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGV 359
Query: 638 VNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHG 697
VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q E+K HG
Sbjct: 360 VNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQIELKRHG 419
Query: 698 SKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNP 757
S+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+AIVQNP+P
Sbjct: 420 SEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSP 479
Query: 758 LIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNL 817
LIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK Q A L
Sbjct: 480 LIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQL 539
Query: 818 GIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQ 877
I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +AS ELQQ
Sbjct: 540 RIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQ 599
Query: 878 ALHVQRLSEQTAL 890
AL+VQ + EQ A+
Sbjct: 600 ALYVQHMLEQAAM 612
>gi|156752809|gb|ABU94150.1| phytochrome N [Pinus sylvestris]
gi|156752849|gb|ABU94170.1| phytochrome N [Pinus sylvestris]
gi|156752865|gb|ABU94178.1| phytochrome N [Pinus sylvestris]
gi|156752879|gb|ABU94185.1| phytochrome N [Pinus sylvestris]
gi|156752881|gb|ABU94186.1| phytochrome N [Pinus sylvestris]
Length = 612
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/613 (68%), Positives = 499/613 (81%), Gaps = 3/613 (0%)
Query: 280 FLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVM 339
FLFM+N+VRMI DC A+ V V+QDE+ P DL+ CGSTLRAPH CH QYM NM SIASLVM
Sbjct: 1 FLFMRNRVRMICDCYAQPVAVIQDERSPRDLSFCGSTLRAPHGCHAQYMANMGSIASLVM 60
Query: 340 AVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE 397
AVV+N++E +GD+ + QK +RLWGLVVCH+T+PR+VPFPLRYACEFL QVF I +NKE
Sbjct: 61 AVVINEKELDGDSEGQMQQKGRRLWGLVVCHHTSPRYVPFPLRYACEFLMQVFGIQLNKE 120
Query: 398 LELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGV 457
+EL QI EK ILRTQTLLCDML+RD PLGIVTQ PNIMDLV+CDGAAL Y+ W LGV
Sbjct: 121 VELAAQIREKQILRTQTLLCDMLLRDTPLGIVTQKPNIMDLVRCDGAALYYEENFWLLGV 180
Query: 458 TPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFW 517
TP + Q+ DIV+WLSE+HMDSTGLS DSL AGY GA +LG+ VCG+AAVRI+ KD +FW
Sbjct: 181 TPTEAQIQDIVAWLSEHHMDSTGLSTDSLVYAGYPGAESLGNAVCGIAAVRINSKDFLFW 240
Query: 518 FRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 577
FRS TA E++WGGAKH+ E+DDG+KMHPRSSF AFLEVVK RSL W+D EMDAIHSLQL
Sbjct: 241 FRSHTAKEIKWGGAKHDLQERDDGKKMHPRSSFNAFLEVVKMRSLSWEDVEMDAIHSLQL 300
Query: 578 ILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGL 637
ILR + K+ + SI+ +L DLK++ M EL AVT+EMVRLIETAT PILAVD G+
Sbjct: 301 ILRGSRKETDGSGRNI-SINRQLNDLKLQEMDELNAVTNEMVRLIETATAPILAVDAYGV 359
Query: 638 VNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHG 697
VNGWN K AELTGLSV++ +G+ + LVE++S + VKRML+LALQG EEQN+Q E+K HG
Sbjct: 360 VNGWNRKAAELTGLSVEEVLGEPLINLVEETSAENVKRMLHLALQGVEEQNVQIELKRHG 419
Query: 698 SKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNP 757
S+ + P+ L+VNAC+SRDL +NVVGVCFVAQD+T QK VMDKFTRI+GDY+AIVQNP+P
Sbjct: 420 SEEDKGPVVLLVNACSSRDLKENVVGVCFVAQDVTGQKIVMDKFTRIQGDYRAIVQNPSP 479
Query: 758 LIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNL 817
LIPPIFG+DE GWC EWN AM KL+GWKREE+IDK+LL EVFGT ACCRLK Q A L
Sbjct: 480 LIPPIFGTDECGWCSEWNSAMEKLSGWKREEIIDKMLLGEVFGTRTACCRLKGQNALTQL 539
Query: 818 GIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQ 877
I+LN +M+GQ+ EK PFGFF R+GKY E LL NKKLD EG +TGVFCFL +AS ELQQ
Sbjct: 540 RIILNSSMTGQETEKFPFGFFDRHGKYVETLLSANKKLDEEGKITGVFCFLHIASPELQQ 599
Query: 878 ALHVQRLSEQTAL 890
AL+VQ + EQ A+
Sbjct: 600 ALYVQHMLEQAAM 612
>gi|380749524|gb|AFE48623.1| phytochrome A, partial [Cyrilla racemiflora]
Length = 473
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/473 (87%), Positives = 450/473 (95%), Gaps = 3/473 (0%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
RSD+VTTAYLH IQKGK+IQPFGCLLALDEKTFKVIAYSENAPE+LTMV+HAVPSVGDHP
Sbjct: 1 RSDKVTTAYLHQIQKGKMIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHP 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VLGIG+D++T+FT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID
Sbjct: 61 VLGIGTDVRTVFTGPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVP+TAAGALQSYKLAAKAI RLQSLPSGSM RLCDTM+QEVFELTGYDRVM
Sbjct: 121 FEPVKPYEVPLTAAGALQSYKLAAKAIARLQSLPSGSMFRLCDTMVQEVFELTGYDRVMT 180
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEVVSE+TK+GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKVL
Sbjct: 181 YKFHDDDHGEVVSEVTKAGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVL 240
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP---QKR 358
QDEKLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV+N+ +EEG+++ P +KR
Sbjct: 241 QDEKLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVINEGDEEGESSDPAQQEKR 300
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHV+KELELE QILEKNILRTQTLLCD
Sbjct: 301 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVSKELELENQILEKNILRTQTLLCD 360
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
MLM+DAPLGIV+QSPN+MDLVKCDGAALLYKNKI+++G TP DF + DIVSWLSEYHMDS
Sbjct: 361 MLMQDAPLGIVSQSPNVMDLVKCDGAALLYKNKIYKMGATPTDFHIRDIVSWLSEYHMDS 420
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
TGLS DSLYDAG+ GALALGDVVCGMAAVRI+ DM+FWFRS TA+E+RWGGA
Sbjct: 421 TGLSTDSLYDAGFPGALALGDVVCGMAAVRITSNDMLFWFRSHTAAEIRWGGA 473
>gi|406685623|gb|AFS51252.1| phytochrome P, partial [Sundacarpus amarus]
Length = 670
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/672 (62%), Positives = 531/672 (79%), Gaps = 10/672 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV------GDHPV 122
AYL +Q+G IQPFGC+L ++E FK+IAYSENA E+L ++ +VP++ G V
Sbjct: 1 AYLSRMQRGGTIQPFGCMLTVEEAGFKIIAYSENALEMLDLMPQSVPNMDLGDPAGGGAV 60
Query: 123 LGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182
L IG+D++T+FT SA AL+KA E+SL+NPI VH + +GKPFYAIVHR+ +++D
Sbjct: 61 LAIGTDVRTLFTPASARALEKAAVAREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVVDL 120
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EP++ + M+AAGA+QS KLA +AI+RLQSLP+G + LCDT++++V ELTGYDRVMAY
Sbjct: 121 EPLRMGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDVGLLCDTVVEDVRELTGYDRVMAY 180
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFHED+HGEVV+EI +S LEPYLG HYPATDIPQA+RFLFM+N+VRMI DC A V+V+Q
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGSHYPATDIPQASRFLFMQNRVRMICDCSATPVRVIQ 240
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLW 362
E+L L L GSTLRAPH CH QYM NM SIASLVMAV++N +EEG T + +LW
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGGGTSGRTSMKLW 300
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVVCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+R
Sbjct: 301 GLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLR 360
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
DAP+GIV+QSP+IM+LVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 DAPIGIVSQSPSIMNLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLS 420
Query: 483 ADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR
Sbjct: 421 TDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 480
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLC 601
+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D +TK+ +H++L
Sbjct: 481 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSNTKTMVHARLN 538
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
D+K++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK
Sbjct: 539 DMKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 598
Query: 662 L-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ LV + S ++V++MLY AL+G+EE+N++ +++T G + + I L+VNAC+S D DN
Sbjct: 599 VHDLVFEESAESVEKMLYRALRGEEEKNVEVKLRTFGLEKQKEAIYLVVNACSSMDYTDN 658
Query: 721 VVGVCFVAQDIT 732
+VGVCFV QD+T
Sbjct: 659 IVGVCFVGQDVT 670
>gi|406685523|gb|AFS51202.1| phytochrome P, partial [Lepidothamnus laxifolius]
Length = 670
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/672 (62%), Positives = 526/672 (78%), Gaps = 10/672 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV------GDHPV 122
AYL +Q+G IQPFGC+LA++E FK+IAYSENA E+L ++ VP++ G V
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSENALEMLDIMPQYVPNMDLGKSGGGGAV 60
Query: 123 LGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182
L IG+D++T+FTA A AL+KA E+SL+NPI VH + +GKPFYAIVHR+ ++ID
Sbjct: 61 LTIGTDVRTLFTAAGARALEKASMAQEISLMNPIWVHSQYAGKPFYAIVHRIDVGMVIDL 120
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EP K + M+AAGA+QS KLA +AI+RLQSLP+G + LCDT++++V ELTGYDRVM Y
Sbjct: 121 EPAKTGDAAMSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFHED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 240
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLW 362
+ L L L GSTLRAPH CH QYM NM SIASL MAVV+N +EEG T + +LW
Sbjct: 241 SQDLMQLLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVINGNDEEGGGTSGRSSMKLW 300
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVVCH+T+PR VPFPLRY CEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+R
Sbjct: 301 GLVVCHHTSPRAVPFPLRYGCEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 360
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
DAP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLS 420
Query: 483 ADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
DSL DAGY GA +LGD VCGMAA RI+ D +FWFRS TA E++WGGAKH PD+KDDGR
Sbjct: 421 TDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 480
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLC 601
+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D +TK+ +H++L
Sbjct: 481 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIE--DSNTKTMVHARLN 538
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
DLK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G+
Sbjct: 539 DLKLQGIDELSSVASEMVRLIETATAPILAVDSEGLVNGWNAKVAELTGLPVGEAMGESL 598
Query: 662 L-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ LV + S + V++ML A++G+EE+NI+ +++T G + + I L+VNAC+SRD DN
Sbjct: 599 VHDLVCEESAECVEKMLNRAVRGEEEKNIEIKLRTFGPQKQKEAIYLVVNACSSRDYTDN 658
Query: 721 VVGVCFVAQDIT 732
+VGVCFVAQD+T
Sbjct: 659 IVGVCFVAQDVT 670
>gi|83699543|gb|ABC40685.1| phytochrome B1 [Zea mays]
Length = 783
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/740 (57%), Positives = 557/740 (75%), Gaps = 21/740 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDYS S+R T +QQ AYL IQ+
Sbjct: 51 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQ------IAAYLSRIQR 104
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH--PVLGIGSDIKTI 132
G IQPFGC LA+ D+ +F+++A+SEN+P+LL + +H+VPS+ P + +G+D + +
Sbjct: 105 GGHIQPFGCTLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPHVSLGADARLL 164
Query: 133 FTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPM 192
F+ SA L++A E+SLLNPI +H + S KPFYAI+HR+ ++ID EP + + +
Sbjct: 165 FSPSSAVLLERAFAAREISLLNPIWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPAL 224
Query: 193 TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEV 252
+ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEV
Sbjct: 225 SIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEV 284
Query: 253 VSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTL 312
V+E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L L
Sbjct: 285 VAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGLSQPLCL 344
Query: 313 CGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLPQKRKRLWGLVVCHN 369
GSTLRAPH CH QYM NM SIASLVMAV+++ D+E+ G + K LWGLVVCH+
Sbjct: 345 VGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMK-LWGLVVCHH 403
Query: 370 TTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIV 429
T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GIV
Sbjct: 404 TSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIV 463
Query: 430 TQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDA 489
TQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ +H DSTGLS DSL DA
Sbjct: 464 TQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHGDSTGLSTDSLADA 523
Query: 490 GYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSS 549
GYLGA ALG+ VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRSS
Sbjct: 524 GYLGAAALGEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 583
Query: 550 FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKIE 606
FKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L++
Sbjct: 584 FKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAIVNGQVQLRELELR 643
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LV 665
G+ EL +V EMVRLIETATVPI AVD DG +NGWN KIAELTGLSV++A+GK + L+
Sbjct: 644 GINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLI 703
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
S TV+++L AL+G+E++N++ ++KT GS+ + PI ++VNAC+SRD N+VGVC
Sbjct: 704 FKESEATVEKLLSRALRGEEDKNVEIKLKTFGSEQSKGPIFVVVNACSSRDYTQNIVGVC 763
Query: 726 FVAQDITPQKTVMDKFTRIE 745
FV QD+T QK VMDKF I+
Sbjct: 764 FVGQDVTGQKVVMDKFVNIQ 783
>gi|406685525|gb|AFS51203.1| phytochrome P, partial [Manoao colensoi]
Length = 657
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/659 (63%), Positives = 525/659 (79%), Gaps = 5/659 (0%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG-DHPVLGIGS 127
AYL +Q+G IQPFGC+LA++E FKVIAYS+NA E+L ++ +VP++ PVL IG+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKVIAYSQNALEMLDIMPQSVPNMDLGKPVLTIGT 60
Query: 128 DIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKP 187
D++T+FT SA AL+KA E+SL+NPI VH + +GKPFYAIVHR+ ++ID EP++
Sbjct: 61 DVRTLFTPASARALEKAAMTQEISLMNPIWVHSQHTGKPFYAIVHRIDVGMVIDLEPLRT 120
Query: 188 YEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHED 247
+ M+AAGA+QS KLA +AI+RLQSLP+G + LCD+++++V ELTGYDRVMAYKFHED
Sbjct: 121 GDASMSAAGAVQSQKLAVRAISRLQSLPAGDIGVLCDSVVEDVRELTGYDRVMAYKFHED 180
Query: 248 DHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLP 307
+HGEVV+E+ +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A V+V+Q EK+
Sbjct: 181 EHGEVVAEMRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIFDCSANPVQVIQSEKMR 240
Query: 308 FDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVC 367
L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWGLVVC
Sbjct: 241 RPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGAGTSGRSSMKLWGLVVC 300
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR VPFPLRYACEFL Q F + +N EL L Q+ EK+ILRTQTLLCDML+RDAP+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELHLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS DSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGTTWSLGVTPTEAQVKDIADWLLEYHGDSTGLSTDSLA 420
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIE 606
SSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D +TK+ +H++L DLK++
Sbjct: 481 SSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSNTKTMVHARLNDLKLQ 538
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL-TLV 665
G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V + +GK + LV
Sbjct: 539 GIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGETMGKSLVHDLV 598
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGV 724
+ S ++V++MLY AL+G+EE+N++ +++T G + + I L+VNAC+SRD +N+VGV
Sbjct: 599 FEESAESVQKMLYRALRGEEEKNVEIKLRTFGPQKQKEAIYLVVNACSSRDYTENIVGV 657
>gi|406685541|gb|AFS51211.1| phytochrome P, partial [Phyllocladus hypophyllus]
Length = 661
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/663 (62%), Positives = 522/663 (78%), Gaps = 10/663 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV------GDHPV 122
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G V
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 123 LGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182
L IG+D++++FT SA ALQKA E+SL+NPI VH + +GKPFYAIVHR+ ++ID
Sbjct: 61 LTIGTDVRSLFTVASARALQKASMAQEISLMNPIWVHSQYTGKPFYAIVHRIDVGMVIDL 120
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EPV+ + ++AAGA+QS +LA +AI+RLQSLP+G + LCDT++++V ELTGYDRVM Y
Sbjct: 121 EPVRTGDAALSAAGAVQSQRLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFHED+HGEVV+EI ++ LEPY GLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 KFHEDEHGEVVAEIRRADLEPYQGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 240
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLW 362
E+L L L GSTLRAPH CH QYM NM S+ASLVMAVV+N +EEG T + +LW
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVINGNDEEGGGTSGRSSMKLW 300
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVVCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+R
Sbjct: 301 GLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 360
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
DAP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLS 420
Query: 483 ADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
DSL DAGY GA +LGD VCGMAA RI+ D +FWFRS TA E++WGGAKH PD+KDDGR
Sbjct: 421 TDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 480
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLC 601
+MHPRSSFKAFLEVVK RS PW++ EMDAIHSLQLILR +F+D+ D +TK+ +H++L
Sbjct: 481 RMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDIE--DSNTKTMVHTRLN 538
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
DLK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL+V +A+GK
Sbjct: 539 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLAVGEAMGKSL 598
Query: 662 L-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ LV + S ++V ++LY AL+G+EEQN++ +++T G + + I L+VNAC+SRD DN
Sbjct: 599 VHDLVFEESAESVDKILYRALRGEEEQNVEIKLRTFGPQKQKEAIYLVVNACSSRDYTDN 658
Query: 721 VVG 723
+VG
Sbjct: 659 IVG 661
>gi|380749526|gb|AFE48624.1| phytochrome A, partial [Enkianthus campanulatus]
Length = 473
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/473 (85%), Positives = 442/473 (93%), Gaps = 3/473 (0%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
RSD+VTTAYLH IQKGKLIQPFGCLLALDEKTFKVIAYSENAPE+LTMV+H VPSVGDHP
Sbjct: 1 RSDKVTTAYLHQIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHTVPSVGDHP 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VLGIG+D++TI T PSA+ALQKA+G+G+VSLLNPILVHCKTSGKPFYAI HRVTGSLIID
Sbjct: 61 VLGIGTDVRTIVTGPSAAALQKAMGYGDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIID 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGS++RLCDT++QEVFELTGYDRVM
Sbjct: 121 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSIQRLCDTIVQEVFELTGYDRVMT 180
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEV SE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKV+
Sbjct: 181 YKFHDDDHGEVFSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCNAKHVKVI 240
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP---QKR 358
QD+KLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VV N+ +E G+++ P KR
Sbjct: 241 QDDKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVFNEGDEGGESSDPAQQDKR 300
Query: 359 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCD 418
KRLWGLVVCHN TPRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKNILRTQTLLCD
Sbjct: 301 KRLWGLVVCHNMTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQTLLCD 360
Query: 419 MLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDS 478
MLMRDAPLGIV+QSPN+MDLV+CDGA LLYK+K +R+G TP DFQL D+VSWLSEYHMDS
Sbjct: 361 MLMRDAPLGIVSQSPNVMDLVRCDGAVLLYKDKTYRMGATPTDFQLRDVVSWLSEYHMDS 420
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
TGLS DSLYDAG+ GALALGDVVCGMAAVRI+ DM+FWFRS TA+E+RWGGA
Sbjct: 421 TGLSTDSLYDAGFPGALALGDVVCGMAAVRITSNDMLFWFRSHTAAEIRWGGA 473
>gi|406685615|gb|AFS51248.1| phytochrome P, partial [Prumnopitys ladei]
Length = 662
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/664 (62%), Positives = 524/664 (78%), Gaps = 10/664 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV------GDHPV 122
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G V
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEEMGFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 123 LGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182
L G+D++T+FT SA AL+KA E+SL+NPI VH + +GKPFYAIVHR+ ++ID
Sbjct: 61 LTTGTDVRTLFTPASARALEKAAMAREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVIDL 120
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EPV+ + M+AAGA+QS KL+ +AI+RLQSLP+G + LCDT++++V ELTGYDRVM Y
Sbjct: 121 EPVRMGDATMSAAGAVQSQKLSVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 KFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVVQ 240
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLW 362
E+L + L GSTLRAPH CH QYM NM SIASLVMAV++N ++EEG T + +LW
Sbjct: 241 SEELRQPICLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGDDEEGGGTSGRVSMKLW 300
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVVCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+R
Sbjct: 301 GLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 360
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
DAP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLS 420
Query: 483 ADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR
Sbjct: 421 TDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 480
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLC 601
+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D +TK+ +H++L
Sbjct: 481 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSNTKTMVHARLN 538
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
D+K++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK
Sbjct: 539 DIKLQGIDELTSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 598
Query: 662 L-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ LV + S ++V++MLY AL+G EE+N++ +++T G + + I L+ NAC+SRD DN
Sbjct: 599 VHDLVFEESAESVEKMLYRALRGDEEKNVEVKLRTFGPQKQKEAIYLVANACSSRDYTDN 658
Query: 721 VVGV 724
+VGV
Sbjct: 659 IVGV 662
>gi|297524050|gb|ADI45743.1| phytochrome A [Echites umbellatus]
Length = 476
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/474 (86%), Positives = 444/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRL SLPSGSMERLCDTM+QEVFELTGYDRVMAYKFH+DDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLHSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGESSDAVQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNK+ LG TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKMHHLGTTPSDFQLNDIVSWLVEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVNASETETKTIHNKLSDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIA+LTGL VD+AIGKH LTLVEDSS
Sbjct: 421 TEMVRLIETASVPILAVDIDGLVNGWNTKIAQLTGLPVDEAIGKHLLTLVEDSS 474
>gi|297524022|gb|ADI45729.1| phytochrome A [Amphineurion marginatum]
Length = 476
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/474 (86%), Positives = 446/474 (94%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA++VKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKNVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGESSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV++SPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELESQIVEKNILKTQTLLCDMLMRDAPLGIVSRSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G+TP DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRMGITPGDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+++RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAADIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVDAPESETKTIHNKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDLS 474
>gi|406685641|gb|AFS51261.1| phytochrome P, partial [Larix laricina]
Length = 655
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/660 (63%), Positives = 523/660 (79%), Gaps = 10/660 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G +QPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P VL I
Sbjct: 1 AYLSRIQRGGRMQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSM-EQPQPEVLTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
K + M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGY+RVM YKFH
Sbjct: 120 KTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM S+ASLVMAV++N ++EG + + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGS-GRNSMKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 MGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA +LGD VCGMA+ RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L DL+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHSRLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
++GM EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 537 LQGMDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQD 596
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LV + S++ V++MLY AL+G+EE+N++ ++T G + + + L+VNAC+SRD DN+VG
Sbjct: 597 LVFEQSVERVEKMLYNALRGEEEKNVEMMLRTFGPQ-KQEAVFLVVNACSSRDFTDNIVG 655
>gi|297524169|gb|ADI45801.1| phytochrome A [Thyrsanthella difformis]
Length = 476
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/474 (87%), Positives = 442/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAI RLQSLPSGS+ERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAIARLQSLPSGSVERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGESSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+GVTPNDFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRVGVTPNDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD +CGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDTICGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK IH+KL DL+I+G +ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVDGSESETKKIHNKLNDLRIDGFQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD DGLVNGWNTKIAELTGL VD+AIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDTDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDLS 474
>gi|406685611|gb|AFS51246.1| phytochrome P, partial [Prumnopitys andina]
Length = 661
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/663 (62%), Positives = 522/663 (78%), Gaps = 10/663 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV------GDHPV 122
AYL +Q+G IQPFGC LA++E FK+IAYS+NA E+L ++ +VP++ G V
Sbjct: 1 AYLSRMQRGGTIQPFGCTLAVEETGFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 123 LGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182
L IG+D++T+FT SA AL+KA E+SL+NPI VH + +GKPFYAIVHR+ ++ID
Sbjct: 61 LAIGTDVRTLFTPASARALEKAAMGREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVIDL 120
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EPV+ + M+AAGA+QS KLA +AI+RLQSLP+G + LCDT++++V ELTGYDRVM Y
Sbjct: 121 EPVRTGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDVGLLCDTVVEDVRELTGYDRVMVY 180
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFHED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N++RMI DC A VKV+Q
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRMRMICDCSAAPVKVVQ 240
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLW 362
E+L L L GSTLRAPH CH QYM NM S+ASLVMAV++N +EEG T + +LW
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDEEGGGTSGRISMKLW 300
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVVCH+T+PR VPF LRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+R
Sbjct: 301 GLVVCHHTSPRAVPFSLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLR 360
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
DAP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLS 420
Query: 483 ADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
DSL DAG+ GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR
Sbjct: 421 TDSLADAGHPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 480
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLC 601
+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D +TK+ +H++L
Sbjct: 481 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSNTKTMVHARLN 538
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
D+K++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK
Sbjct: 539 DMKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 598
Query: 662 LT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ LV + S ++V++MLY AL+G EE+N++ +++T G + + I L+VNAC+SRD DN
Sbjct: 599 VQDLVFEESHESVEKMLYRALRGDEEKNVEVKLRTFGPQKQKEAIYLVVNACSSRDYTDN 658
Query: 721 VVG 723
+VG
Sbjct: 659 IVG 661
>gi|297524177|gb|ADI45805.1| phytochrome A [Wrightia coccinea]
Length = 476
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/474 (86%), Positives = 444/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKVLQDEKLPFDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVLQDEKLPFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGGSSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G TP+DFQL+DIVSWL EYHMDSTGLS DSL+DAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRMGSTPSDFQLNDIVSWLIEYHMDSTGLSTDSLHDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFL+
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLD 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMD IHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDGIHSLQLILRNSFKEVEASESETKTIHTKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVDVDGLVNGWNTKIAELTGL VD+AIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDVDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDCS 474
>gi|406685635|gb|AFS51258.1| phytochrome P, partial [Larix decidua]
Length = 655
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/660 (63%), Positives = 522/660 (79%), Gaps = 10/660 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P L I
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSM-EQPQPEFLTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
K + M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGY+RVM YKFH
Sbjct: 120 KTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM S+ASLVMAV++N ++EG + + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGS-GRNSMKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 MGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA +LGD VCGMA+ RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L DL+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHSRLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
++GM EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 537 LQGMDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQD 596
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LV + S++ V++MLY AL+G+EE+N++ ++T G + + + L+VNAC+SRD DN+VG
Sbjct: 597 LVFEESVERVEKMLYNALRGEEEKNVEMMLRTFGPQ-KQEAVFLVVNACSSRDFTDNIVG 655
>gi|297524107|gb|ADI45770.1| phytochrome A [Odontadenia perrottetii]
Length = 476
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/474 (86%), Positives = 445/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA++VKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKYVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGESSDAAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+Q+PNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQNPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNK+ +LG+TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKMHQLGITPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVDASESETKTIHNKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH LTL ED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTLXEDLS 474
>gi|380749540|gb|AFE48631.1| phytochrome A, partial [Phyllodoce empetriformis]
Length = 480
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/480 (85%), Positives = 441/480 (91%), Gaps = 10/480 (2%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
RSDRVTTAYLH IQKGK IQPFGCLLALDEKTF+VIAYSENAPE+LTMV+HAVPSVGDHP
Sbjct: 1 RSDRVTTAYLHQIQKGKQIQPFGCLLALDEKTFQVIAYSENAPEMLTMVSHAVPSVGDHP 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VLGIG+D++TIFT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID
Sbjct: 61 VLGIGTDVRTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAI+RLQSLPSGS+ERLCDTM+QEVFELTGYDRVM
Sbjct: 121 FEPVKPYEVPMTAAGALQSYKLAAKAISRLQSLPSGSIERLCDTMVQEVFELTGYDRVMV 180
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEV+SE+TK GLEPYLGLHYPATDIPQAARFLF+KNKVRMI DC A+HVKV+
Sbjct: 181 YKFHDDDHGEVLSEVTKPGLEPYLGLHYPATDIPQAARFLFLKNKVRMICDCHAKHVKVI 240
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN----------DEEEEGD 351
QD+KLPFDLTLCGS LRAPHSCHLQYMENMNSIASLVM+VVV+ + E
Sbjct: 241 QDDKLPFDLTLCGSALRAPHSCHLQYMENMNSIASLVMSVVVHEGDEEGEGEGEGERSDP 300
Query: 352 NTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILR 411
QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKNILR
Sbjct: 301 ANQQQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILR 360
Query: 412 TQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWL 471
TQTLLCDMLMRDAPLGIV+QSPN+MDLVKCDGA LLYK KI+R+G TP DFQL DIVSWL
Sbjct: 361 TQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGALLLYKKKIYRMGATPTDFQLRDIVSWL 420
Query: 472 SEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
SEYH DSTGLS DSLYDAGY GALALG+ VCGMAAVRI+P DM+FWFR+ TA+E+RWGGA
Sbjct: 421 SEYHTDSTGLSTDSLYDAGYPGALALGNGVCGMAAVRITPNDMLFWFRAHTAAEIRWGGA 480
>gi|406685613|gb|AFS51247.1| phytochrome P, partial [Prumnopitys ferruginoides]
Length = 662
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/664 (63%), Positives = 524/664 (78%), Gaps = 10/664 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV------GDHPV 122
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ AVP++ G V
Sbjct: 1 AYLSRLQRGGTIQPFGCMLAVEEMGFKIIAYSQNALEMLDLMPQAVPNMELGKPGGGGAV 60
Query: 123 LGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182
L IG+D++T+FT SA AL KA E+SL+NPI VH + +GKPFYAIVHR+ ++ID
Sbjct: 61 LTIGTDVRTLFTPASARALAKAAMAREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVIDL 120
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EPV+ + M+AAGA+QS KLA +AI+RLQSLPSG + LCDT++++V ELTGYDRVM Y
Sbjct: 121 EPVRMGDASMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 KFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSANPVKVVQ 240
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLW 362
E+L L L GSTLRAPH CH QYM NM SIASLVMAV++N +EEG T + +LW
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGGWTSGRVSMKLW 300
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVVCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+R
Sbjct: 301 GLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 360
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
DAP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 DAPIGIVTQSPSIMDLVKCDGAALYYGGXTWCLGVTPTEAQIKDIADWLLEYHGDSTGLS 420
Query: 483 ADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR
Sbjct: 421 TDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 480
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLC 601
+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D +TK+ +H++L
Sbjct: 481 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSNTKTMVHARLN 538
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
D+K++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK
Sbjct: 539 DMKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 598
Query: 662 L-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ LV + S ++V++MLY AL+G+EE+N++ +++T G K + I L+ NAC+SRD DN
Sbjct: 599 VHDLVFEESAESVEKMLYRALRGEEEKNVEVKLRTFGPKKQKEAIYLVANACSSRDYTDN 658
Query: 721 VVGV 724
+VGV
Sbjct: 659 IVGV 662
>gi|297524179|gb|ADI45806.1| phytochrome A [Wrightia dubia]
Length = 476
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/474 (86%), Positives = 442/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKVLQDEKLPFDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVLQDEKLPFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGGSSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G TP+DFQL+DIVSWL EYHMDSTGLS DSL+DAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRMGSTPSDFQLNDIVSWLIEYHMDSTGLSTDSLHDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD +CGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFL+
Sbjct: 301 ALGDAICGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLD 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMD IHSLQLILRN+FK+V + +TK+IH+KL DL+I+G ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDGIHSLQLILRNSFKEVEASESETKTIHTKLNDLRIDGFLELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVDVDGLVNGWNTKIAELTGL VDKAIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDVDGLVNGWNTKIAELTGLPVDKAIGKHLLTLVEDCS 474
>gi|406685509|gb|AFS51195.1| phytochrome P, partial [Dacrydium guillauminii]
Length = 660
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/662 (62%), Positives = 520/662 (78%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-----VGDHPVL 123
AYL +Q+G IQP GC+LA++E FK+IA+S+NA E+L ++ +VPS +G VL
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA +L+KA ++SL+NPI VH + SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS KLA +AI+RLQSLPSG + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GI+TQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDITEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
LV + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD DN+
Sbjct: 599 HDLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKEKEAIYLVVNACSSRDYTDNI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685505|gb|AFS51193.1| phytochrome P, partial [Dacrycarpus imbricatus]
Length = 661
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/663 (61%), Positives = 521/663 (78%), Gaps = 9/663 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G +QPFGC+LA++E FK+IAYS+NA E+L ++ +VPS+ G VL
Sbjct: 1 AYLSRMQRGGTLQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT S AL+KA ++SL+NPI VH + SGKPF AIVHR+ +++ID E
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVAMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS KLA +AI+RLQSLP+G + LCDT++++V ELTGYDRVMAY+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMAYR 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM S+ASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N +L+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMQLQLAAQMTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELT L V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V +MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD DN+
Sbjct: 599 HDIVLEESAECVDKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDNI 658
Query: 722 VGV 724
VGV
Sbjct: 659 VGV 661
>gi|380749544|gb|AFE48633.1| phytochrome A, partial [Pyrola americana]
Length = 476
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/478 (85%), Positives = 441/478 (92%), Gaps = 10/478 (2%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
RSD+VTTAYLH IQKG LIQPFGCLLALDEKTFKVIAYSENAPE+LTMV+HAVPSVGDHP
Sbjct: 1 RSDKVTTAYLHQIQKGTLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHP 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VLGIG+D++TIFT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVTGS+IID
Sbjct: 61 VLGIGTDVRTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSMIID 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT++QEVFELTGYDRVMA
Sbjct: 121 FEPVKPFEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVMA 180
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEV SE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKV+
Sbjct: 181 YKFHDDDHGEVFSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVI 240
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN--------DEEEEGDNT 353
QD+KLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VVVN + + +
Sbjct: 241 QDDKLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGGEEGEGESSDPANQQ 300
Query: 354 LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
L KRKRLWGLVVCH+TTPRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKNILRTQ
Sbjct: 301 L--KRKRLWGLVVCHSTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQ 358
Query: 414 TLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSE 473
TLLCDMLMRDAPLGIV+QSPN+MDLVKCDGA LLYK+K++R+G TP DFQL DIVSWLSE
Sbjct: 359 TLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKHKVYRMGATPTDFQLRDIVSWLSE 418
Query: 474 YHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
YH DSTGLS DSLYDAGY GALALG VCGMAAVRI+ DM+FWFR+ TA+E+RWGGA
Sbjct: 419 YHTDSTGLSTDSLYDAGYPGALALGGEVCGMAAVRITSNDMLFWFRAHTAAEIRWGGA 476
>gi|297740631|emb|CBI30813.3| unnamed protein product [Vitis vinifera]
Length = 877
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/816 (53%), Positives = 562/816 (68%), Gaps = 24/816 (2%)
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFH+DDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VR+I DC A+ V+
Sbjct: 1 MVYKFHDDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRIICDCNAKAVR 60
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK 359
V+Q E+L L L STLR+PH CHLQYM NM IASL MAVV+N +
Sbjct: 61 VIQSEELKQPLCLVNSTLRSPHGCHLQYMFNMGCIASLAMAVVINGNDA----------T 110
Query: 360 RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDM 419
+LWGLVVCH+T+PR+VPFPLRYACEFL Q F + + EL+L Q+ EK ILR QTLLCDM
Sbjct: 111 KLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLAEKKILRMQTLLCDM 170
Query: 420 LMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDST 479
L+R+APLGIVT SP+IMDL+KCDGAAL Y + W LGVTP + Q+ DI WL H DST
Sbjct: 171 LLREAPLGIVTHSPSIMDLLKCDGAALYYGGRCWLLGVTPTESQVKDIAEWLLTEHGDST 230
Query: 480 GLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKD 539
GLS DSL DAGY GA LGD VCGMA RI+ KD + WFRS TA EV+WGGAKH P++KD
Sbjct: 231 GLSTDSLADAGYPGAALLGDAVCGMATARITSKDFLLWFRSHTAKEVKWGGAKHHPEDKD 290
Query: 540 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK-SIHS 598
DG +MHPRSSFKAFLEVVK+RSLPW+ +++AIHSLQLI+R++F+D+ D K +H+
Sbjct: 291 DGGRMHPRSSFKAFLEVVKSRSLPWEVSDINAIHSLQLIMRDSFQDIE--DSSGKVMVHT 348
Query: 599 KLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
+ D +++G+ EL +V EMV+LIETAT PI VD G +NGWN KIAELTGL +A+G
Sbjct: 349 QKYDSEMQGLNELGSVACEMVKLIETATAPIFGVDSSGCINGWNAKIAELTGLQAKEAMG 408
Query: 659 KHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
K + +V + V +L ALQG+E++N++ ++K G D + ++VNAC SRD
Sbjct: 409 KSLVDEIVHEDLRGAVDNLLCRALQGKEDKNVELKLKNFGLNQQDSALYIVVNACTSRDY 468
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPA 777
+++VGVCFV QDIT +K VMDKF R++GDYKAIVQ NPLIPPIF SD C EWN +
Sbjct: 469 TNDIVGVCFVGQDITSEKIVMDKFIRLQGDYKAIVQCLNPLIPPIFASDGNACCSEWNTS 528
Query: 778 MVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGF 837
+ KLTG R EVI K+L EVFG C LK+Q+ I+L +A+SGQD EK PFGF
Sbjct: 529 LEKLTGCMRHEVIRKMLPGEVFG---GLCPLKSQDTLTRFTILLYQAISGQDTEKFPFGF 585
Query: 838 FARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQAL-HVQRLSEQTALKRLKAL 896
F ++GK E LL NK+ D G V G FCFLQ+ + + Q L H E + K L
Sbjct: 586 FDKSGKLVEVLLTANKRTDANGNVIGCFCFLQIDTPDKHQGLGHGPEYRE--CFSKFKEL 643
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY +++++NPL+GI F+ K++E T QK+ L TS C+RQ+ I+ D D+ I +G
Sbjct: 644 AYIRQEMKNPLNGIRFTHKLLETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEEGS 703
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
++L + EF L VL A +SQVMM K +++V E E+I + L GD I+LQQVL+DFL
Sbjct: 704 MELNVEEFLLGNVLDAVVSQVMMLLKEKKLQLVCEIPEEIKTLPLSGDQIKLQQVLSDFL 763
Query: 1017 SISINFVPNGG---QLMVSSSLTKDQ-LGQSVHLAY 1048
++ P+ ++ +S+ L Q + VHL +
Sbjct: 764 HNIVHHAPSSDGWIEIKISTGLKMIQDFNEFVHLQF 799
>gi|406685499|gb|AFS51190.1| phytochrome P, partial [Dacrycarpus cinctus]
gi|406685501|gb|AFS51191.1| phytochrome P, partial [Dacrycarpus kinabaluensis]
Length = 660
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/662 (62%), Positives = 520/662 (78%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G +QPFGC+LA++E FK+IAYS+NA E+L ++ +VPS+ G VL
Sbjct: 1 AYLSRMQRGGTLQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT S AL+KA ++SL+NPI VH + SGKPF AIVHR+ +++ID E
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVAMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS KLA +AI+RLQSLP+G + LCDT++++V ELTGYDRVMAY+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMAYR 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM S+ASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELT L V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V +MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD DN+
Sbjct: 599 HDIVLEESAECVDKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDNI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685513|gb|AFS51197.1| phytochrome P, partial [Dacrydium xanthandrum]
Length = 660
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/662 (62%), Positives = 518/662 (78%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-----VGDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IA+S+NA E+L ++ +VPS +G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA L+KA ++S +NPI VH + SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARGLEKAAMAPDISFMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS KLA +AI+RLQSLPSG + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GI+TQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
LV + S + V++MLY AL+G+EE+N++ +++ G++ + I L+VNAC+SRD DN+
Sbjct: 599 HDLVLEESAECVEKMLYRALRGEEEKNVEIKLRIFGTQKEKEAIYLVVNACSSRDYTDNI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685511|gb|AFS51196.1| phytochrome P, partial [Dacrydium nausoriense]
Length = 660
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/662 (62%), Positives = 520/662 (78%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-----VGDHPVL 123
AYL +Q+G IQP GC+LA++E FK+IA+S+NA E+L ++ +VP+ +G VL
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPTMELGKLGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA +L+KA ++SL+NPI VH + SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS KLA +AI+RLQSLPSG + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GI+TQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
LV + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD DN+
Sbjct: 599 HDLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKEKEAIYLVVNACSSRDYTDNI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685489|gb|AFS51185.1| phytochrome P, partial [Acmopyle sahniana]
Length = 659
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/661 (62%), Positives = 519/661 (78%), Gaps = 8/661 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS--VGDH--PVLG 124
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP+ +G H VL
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGSVLT 60
Query: 125 IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEP 184
IG+D++T+FT A AL+KA ++SL+NPI VH + +GKPF AIVHR+ ++ID EP
Sbjct: 61 IGTDVRTLFTPSGARALEKAAMAPDISLMNPIWVHSQYTGKPFNAIVHRIDVGIVIDLEP 120
Query: 185 VKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKF 244
++ + M+ AGA+QS KLA +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YKF
Sbjct: 121 LRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYKF 180
Query: 245 HEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDE 304
HED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E
Sbjct: 181 HEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQSE 240
Query: 305 KLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGL 364
+L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG + +LWGL
Sbjct: 241 ELRQPFCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMKLWGL 300
Query: 365 VVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA 424
VVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RDA
Sbjct: 301 VVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDA 360
Query: 425 PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSAD 484
P+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS D
Sbjct: 361 PIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLSTD 420
Query: 485 SLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKM 544
SL DAGY GA LGD VCGMAA RI+ KD +FW+RS TA E++WGGAKH PD+KDDGR+M
Sbjct: 421 SLADAGYPGAALLGDAVCGMAAARITSKDYLFWYRSHTAKEMKWGGAKHHPDDKDDGRRM 480
Query: 545 HPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDL 603
HPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D DTK+ +H++L DL
Sbjct: 481 HPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSDTKTMVHARLNDL 538
Query: 604 KIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL- 662
K++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 KLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVH 598
Query: 663 TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVV 722
LV + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD DN+V
Sbjct: 599 DLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDNIV 658
Query: 723 G 723
G
Sbjct: 659 G 659
>gi|380749522|gb|AFE48622.1| phytochrome A, partial [Chimaphila umbellata]
Length = 475
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/475 (86%), Positives = 441/475 (92%), Gaps = 5/475 (1%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
RSD+VTTAYLH IQKG +IQPFGCLLALDEKTFKVIAYSENAPE+LTMV+HAVPSVGDHP
Sbjct: 1 RSDKVTTAYLHQIQKGTMIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHP 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VLGIG+D++TIFT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID
Sbjct: 61 VLGIGTDVRTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA
Sbjct: 121 FEPVKPFEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 180
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEV SE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC+A+ VKV+
Sbjct: 181 YKFHDDDHGEVFSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCQAKRVKVI 240
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG-----DNTLPQ 356
QD+KLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VVVN+ EEG D Q
Sbjct: 241 QDDKLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGGEEGEGESYDPANQQ 300
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT PRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKNILRTQTLL
Sbjct: 301 KRKRLWGLVVCHNTNPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQTLL 360
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPN+MDLVKCDGA LLYK+K++R+G TP DFQL DIVSWLSEYH
Sbjct: 361 CDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKHKVYRMGATPADFQLRDIVSWLSEYHA 420
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
DSTGLS DSL DAGY GALALG VCGMAAVRI+ DM+FWFR+ TA+E+RWGGA
Sbjct: 421 DSTGLSTDSLSDAGYPGALALGGEVCGMAAVRITSNDMLFWFRAHTAAEIRWGGA 475
>gi|406685503|gb|AFS51192.1| phytochrome P, partial [Dacrycarpus compactus]
Length = 661
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/663 (61%), Positives = 521/663 (78%), Gaps = 9/663 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G +QPFGC++A++E FK+IAYS+NA E+L ++ +VPS+ G VL
Sbjct: 1 AYLSRMQRGGTLQPFGCMVAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT S AL+KA ++SL+NPI VH + SGKPF AIVHR+ +++ID E
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVAMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS KLA +AI+RLQSLP+G + LCDT++++V ELTGYDRVMAY+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMAYR 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HG+VV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGDVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM S+ASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELT L V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V +MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD DN+
Sbjct: 599 HDIVLEESAECVDKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDNI 658
Query: 722 VGV 724
VGV
Sbjct: 659 VGV 661
>gi|297524133|gb|ADI45783.1| phytochrome A [Prestonia lagoensis]
Length = 476
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/476 (85%), Positives = 444/476 (93%), Gaps = 3/476 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFH+DDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKVLQDEKL F+LTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVLQDEKLSFELTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D QKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGESSDAAQLQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G TP+DFQL+DIVSWL EYHMDSTGLS DSL+DAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRMGTTPSDFQLNDIVSWLVEYHMDSTGLSTDSLHDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALG VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP E+DDGRKMHPRSSFKAFLE
Sbjct: 301 ALGAAVCGMAAVRISXKDWLFWFRSHTAAEIRWGGAKHEPGERDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMD IHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDGIHSLQLILRNSFKEVNASETETKTIHNKLSDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSID 671
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH LTLVEDSS +
Sbjct: 421 TEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDSSAE 476
>gi|13383428|gb|AAK20977.1| phytochrome A [Pachysandra americana]
Length = 465
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/465 (88%), Positives = 434/465 (93%), Gaps = 3/465 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAI RLQSLPSGSMERL
Sbjct: 1 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVMAYKFHEDDHGEVVSEITK GLEPYLGLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMAYKFHEDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DC A+HVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYM+NM SIASLVMAVV
Sbjct: 121 MKNKVRMICDCNAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMDNMGSIASLVMAVV 180
Query: 343 VNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELE 399
+N+ +E+G D PQKRKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVF IHVNKE+
Sbjct: 181 INEGDEDGEGSDPAQPQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFXIHVNKEIG 240
Query: 400 LEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTP 459
LE QILEKNILRTQTLLCDMLMRDAPLG V+QSPNIMDLVKCDGAALLYKNKIWRLG+ P
Sbjct: 241 LENQILEKNILRTQTLLCDMLMRDAPLGTVSQSPNIMDLVKCDGAALLYKNKIWRLGMAP 300
Query: 460 NDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFR 519
DFQ++DI SWLSEYHMDSTGLS DSLYDAGY GALALGDVVCGMAAVRI+ KDM+FWFR
Sbjct: 301 GDFQINDISSWLSEYHMDSTGLSTDSLYDAGYPGALALGDVVCGMAAVRITTKDMLFWFR 360
Query: 520 SQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 579
S TA EVRWGGAKHE EKDDGR+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL
Sbjct: 361 SHTAGEVRWGGAKHERGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 420
Query: 580 RNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIET 624
RNAF+DV T+DLDT +I +L DLKI+GM+ELEAVT+EMVRL+ET
Sbjct: 421 RNAFRDVETMDLDTNTIRMQLNDLKIKGMEELEAVTNEMVRLMET 465
>gi|406685633|gb|AFS51257.1| phytochrome P, partial [Cedrus libani]
Length = 656
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/660 (62%), Positives = 521/660 (78%), Gaps = 9/660 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L +V+ +VPS+ + P VL I
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLVSQSVPSM-EQPQSEVLTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+F A SA +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFIAASAHSLEKAAMAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
K + M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGYDRVM YKFH
Sbjct: 120 KTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCIAPPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM S+ASLVMAV++N ++EG + + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGS-GRNSMKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTETQIKDIADWLLEHHCDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA +LGD VCGMA+ RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +H++L DL+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDID--DSSTKTMVHARLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LV + S++ V +ML A++G+EE+N++ ++T G + + + L+VNAC+SRD DN+VG
Sbjct: 597 LVLEESVERVDKMLDNAIRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685529|gb|AFS51205.1| phytochrome P, partial [Pherosphaera fitzgeraldii]
Length = 660
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/662 (61%), Positives = 520/662 (78%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+L ++E FK+IAYS+NA E+L ++ +VPS+ VL
Sbjct: 1 AYLSRMQRGGTIQPFGCMLTVEETNFKIIAYSQNALEMLDLMPQSVPSMDSKLGAGGAVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++++FT S+ AL+KA ++SL+NPI +H + +GKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRSLFTPSSSRALEKAFMAPDISLMNPIWIHSQYTGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS KLA +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASL MAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMSNMGSIASLAMAVVINGNDEEGGGTGGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP++ Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGATTWCLGVTPSEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA +LGD VCGMAA RI+ +D +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D DTK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSDTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+ K +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMSKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
LV + S ++V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD DN+
Sbjct: 599 HDLVLEESAESVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTDNI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|297524161|gb|ADI45797.1| phytochrome A [Stipecoma peltigera]
Length = 476
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/474 (86%), Positives = 446/474 (94%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKVLQDEKL FDLT+CGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVLQDEKLSFDLTMCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP---QKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG+++ QKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGESSDAXQLQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+Q+PNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQNPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGA+LLYKNKI +LG+TP+DF L+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGASLLYKNKIHQLGMTPSDFHLNDIVSWLVEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGR+MHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN++K+V D +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSYKEVDASDSETKTIHNKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVDVDGL+NGWNTKIAELTGL VD+AIGKH LTLVEDSS
Sbjct: 421 AEMVRLIETASVPILAVDVDGLINGWNTKIAELTGLPVDEAIGKHLLTLVEDSS 474
>gi|406685649|gb|AFS51265.1| phytochrome P, partial [Pinus strobus]
Length = 656
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/659 (62%), Positives = 517/659 (78%), Gaps = 7/659 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV--GDHPVLGIG 126
AYL IQ+G +IQPFGC+LA++E TF++IAYSENA E+L + +VPS+ VL IG
Sbjct: 1 AYLSRIQRGGIIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQSQQEVLTIG 60
Query: 127 SDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVK 186
+D++T FTA S+ +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++ID EP++
Sbjct: 61 TDVRTQFTAASSHSLEKAAVTQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLR 120
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
+ M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGYDRVM YKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
D+HGEVV EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+L
Sbjct: 181 DEHGEVVFEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVV 366
L L GSTLRAPH CH QYM NM SIASLVMAV++N ++EG + + +LWGLVV
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGGGS-GRNSMKLWGLVV 299
Query: 367 CHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPL 426
CH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+R AP+
Sbjct: 300 CHHTSPRPVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRHAPM 359
Query: 427 GIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSL 486
GIVTQSP+IMDLVKCDGAAL Y K W LGVTP + Q+ DI WL E+H DSTGLS DSL
Sbjct: 360 GIVTQSPSIMDLVKCDGAALYYGGKCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSL 419
Query: 487 YDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHP 546
DAGY GA +LGD VCGMA+ RI+ KD IFWFRS TA E++WGGAKH PD+KDDGR+MHP
Sbjct: 420 ADAGYPGAASLGDAVCGMASARITSKDFIFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHP 479
Query: 547 RSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKI 605
RSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L DL++
Sbjct: 480 RSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHSQLNDLRL 537
Query: 606 EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-L 664
+G+ EL +V SEMVRLIETAT PILAVD +G VNGWN K+AELTGL V +A+G + L
Sbjct: 538 QGIDELSSVASEMVRLIETATAPILAVDYNGCVNGWNAKVAELTGLPVGEAMGMSLVQDL 597
Query: 665 VEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
V + S+++V++MLY AL+G+EE+N++ +KT G + + L+VNAC+SRD DN+VG
Sbjct: 598 VFEESVESVEKMLYNALRGEEEKNVEMMLKTFGPQKEKKAVILVVNACSSRDFTDNIVG 656
>gi|297524115|gb|ADI45774.1| phytochrome A [Parameria laevigata]
Length = 476
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/474 (86%), Positives = 442/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLF+KNKVRMI DCRA+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFIKNKVRMICDCRAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYM+NMNSIASLVMAVV+ND +EEG D+ PQKRK+LWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMDNMNSIASLVMAVVINDGDEEGESSDSAQPQKRKKLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G TP+DFQL+DIVSWL EYHMDSTGLS DSLYDA + GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRMGTTPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAAFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALG VCGMAAVRIS KD +FWFRS A+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGHAVCGMAAVRISDKDWLFWFRSHAAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVDASEYETKTIHNKLHDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDLS 474
>gi|406685507|gb|AFS51194.1| phytochrome P, partial [Dacrydium balansae]
Length = 660
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/662 (62%), Positives = 518/662 (78%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-----VGDHPVL 123
AYL +Q+G IQP GC+LA++E FK+IA+S+NA E+L ++ +VPS +G VL
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA +L+KA ++SL+NPI VH + SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS KLA +AI+RLQSLPSG + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GI+TQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
LV + S + V++MLY AL+G+EE+N++ +++T G + + I L+VNAC+ RD DN+
Sbjct: 599 HDLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGIQKEKEAIYLVVNACSCRDYTDNI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|380749538|gb|AFE48630.1| phytochrome A, partial [Orthilia secunda]
Length = 476
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/478 (84%), Positives = 440/478 (92%), Gaps = 10/478 (2%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
RSD+VTTAYLH IQKG LIQPFGCLLALDEKTFKVIAYSENAPE+LTMV+HAVPSVGDHP
Sbjct: 1 RSDKVTTAYLHQIQKGTLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHP 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VLGIG+D++TIFT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVTGS+II
Sbjct: 61 VLGIGTDVRTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSMIIG 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDT++QEVFELTGYDRVMA
Sbjct: 121 FEPVKPFEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVMA 180
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEV SE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKV+
Sbjct: 181 YKFHDDDHGEVFSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVI 240
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN--------DEEEEGDNT 353
QD+KLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VVVN + + +
Sbjct: 241 QDDKLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGGEEGEGESSDPANQQ 300
Query: 354 LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
L KRKRLWGLVVCH+TTPRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKNILRTQ
Sbjct: 301 L--KRKRLWGLVVCHSTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQ 358
Query: 414 TLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSE 473
TLLCDMLMRDAPLGIV+QSPN+MDLVKCDGA LLYK+K++R+G TP DFQL DIVSWLSE
Sbjct: 359 TLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKHKVYRMGATPTDFQLRDIVSWLSE 418
Query: 474 YHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
YH DSTGLS DSLYDAGY GALALG VCGMAAVRI+ DM+FWFR+ TA+E+RWGGA
Sbjct: 419 YHTDSTGLSTDSLYDAGYPGALALGGEVCGMAAVRITSNDMLFWFRAHTAAEIRWGGA 476
>gi|297524139|gb|ADI45786.1| phytochrome A [Rhabdadenia biflora]
Length = 476
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/474 (86%), Positives = 444/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKV+QD KL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVIQDGKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENM+SIASLVMAVV+ND ++EGD + PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMDSIASLVMAVVINDGDDEGDRSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI +G+TP++FQL+DIVSWL EYHMDSTGLS DSL DAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHHMGITPSEFQLNDIVSWLIEYHMDSTGLSTDSLSDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFR+ TA+EVRWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRAHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V D +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVEASDSETKAIHTKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKHFLTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHFLTLVEDLS 474
>gi|13383408|gb|AAK20967.1| phytochrome A [Heuchera canadensis]
Length = 465
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/465 (87%), Positives = 435/465 (93%), Gaps = 3/465 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQ+LPSGS+ERL
Sbjct: 1 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSVERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDTM+QEVFELTGYDRVMAYKFH+DDHGEVVSEITK GLEPYLGLHYPATDIPQAARFLF
Sbjct: 61 CDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNK+RMI DCRA+HVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV
Sbjct: 121 MKNKIRMICDCRAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 180
Query: 343 VNDEEEEGDNT---LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELE 399
VND ++E +++ P KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHV+KELE
Sbjct: 181 VNDGDDESESSNPAQPSKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVSKELE 240
Query: 400 LEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTP 459
LE QILEKNILRTQTLLCDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIWRLGV P
Sbjct: 241 LENQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWRLGVVP 300
Query: 460 NDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFR 519
D QL DI SWLS+YHMDSTGLS DSLYDAG+ AL+LGDVVCGMAAV+I+ D++FWFR
Sbjct: 301 TDSQLQDIASWLSKYHMDSTGLSTDSLYDAGFSRALSLGDVVCGMAAVKINSNDILFWFR 360
Query: 520 SQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 579
S TA+E+RWGGAKHE EKDD RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL
Sbjct: 361 SHTAAEIRWGGAKHETGEKDDNRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 420
Query: 580 RNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIET 624
RN FKD+ T+D +T IH+KL DLKIEGM+ELEAVTSEMVRLIET
Sbjct: 421 RNTFKDIETVDANTNKIHTKLSDLKIEGMQELEAVTSEMVRLIET 465
>gi|13383388|gb|AAK20957.1| phytochrome A [Asparagus falcatus]
Length = 554
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/556 (73%), Positives = 477/556 (85%), Gaps = 18/556 (3%)
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
PYEVPMTAAGALQSYKLAAKAI+RL+SLP GSME+LC+ +++EVFELTGYDR MAY+FHE
Sbjct: 1 PYEVPMTAAGALQSYKLAAKAISRLESLPGGSMEKLCNAVVEEVFELTGYDRAMAYRFHE 60
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
DDHGEV SE+TK GLEPYLGLHYPATDIPQAARFLFMK+KVRMI DCRA+ V+VLQDEKL
Sbjct: 61 DDHGEVFSEVTKPGLEPYLGLHYPATDIPQAARFLFMKSKVRMICDCRAKPVRVLQDEKL 120
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ---------- 356
PFD+T CGSTLRAPHSCHLQYMENMNSIASLVMAVVVN+ E+
Sbjct: 121 PFDITFCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNEGGEDEGEGEAGQASSPAQQQQ 180
Query: 357 --KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
+RKRLWGLVVCHN +PRFVPFPLRYAC+FL QVFAIHVNKE ELE+QI EKNILRTQT
Sbjct: 181 GLRRKRLWGLVVCHNESPRFVPFPLRYACQFLMQVFAIHVNKEFELEHQIREKNILRTQT 240
Query: 415 LLCDMLMRDA-PLGIVT-QSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLS 472
LLCD+L+R+A PLGIVT +SPN+ DLV+CDGAALLY++KIWRLG TP D ++ DI WL
Sbjct: 241 LLCDILLREAGPLGIVTARSPNVTDLVRCDGAALLYEDKIWRLGRTPTDSEIRDIAYWLV 300
Query: 473 EYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
EYH DSTGLS DSL +AGY GA ALGD+VCG+AA RI+ +D++FWFRS TA+EVRWGGAK
Sbjct: 301 EYHADSTGLSTDSLLEAGYPGAFALGDLVCGLAAARINSRDILFWFRSHTAAEVRWGGAK 360
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD 592
H+P ++DDGR+MHPRSSFKAFLEVVKTRSLPW DYEMDAIHSLQLILR +F DV
Sbjct: 361 HDPSDEDDGRRMHPRSSFKAFLEVVKTRSLPWSDYEMDAIHSLQLILRGSFNDVKK---- 416
Query: 593 TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLS 652
++ + S++ L++EGM+EL+AVT+EMVRLIETATVPILAVDVDG++NGWN KIAELTGL
Sbjct: 417 SEGLDSRMRSLRVEGMEELQAVTNEMVRLIETATVPILAVDVDGVINGWNLKIAELTGLP 476
Query: 653 VDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNAC 712
VD+AIGKH L LVEDSS+ V+RML LALQG EEQN++F++KT G + +D P+ L+VNAC
Sbjct: 477 VDEAIGKHLLALVEDSSVAQVRRMLLLALQGTEEQNVEFQMKTCGDRGDDGPVILVVNAC 536
Query: 713 ASRDLHDNVVGVCFVA 728
ASRDL++ VVGVCFVA
Sbjct: 537 ASRDLNEKVVGVCFVA 552
>gi|406685637|gb|AFS51259.1| phytochrome P, partial [Larix gmelinii]
Length = 655
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/660 (62%), Positives = 520/660 (78%), Gaps = 10/660 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P L I
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSM-EQPQPEFLTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA +L+K E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAASAHSLEKVAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
K + M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGY+RVM YKFH
Sbjct: 120 KTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM S+ASLVMAV++N ++EG + + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGS-GRNSMKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPF LRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFSLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 MGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA +LGD VCGMA+ RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L DL+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHSRLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
++GM EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 537 LQGMDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQD 596
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LV + S++ V++MLY AL+G+EE+N++ ++T G + + + L+VNAC+SRD DN+VG
Sbjct: 597 LVFEESVERVEKMLYNALRGEEEKNVEMMLRTFGPQ-KQEAVFLVVNACSSRDFTDNIVG 655
>gi|297524042|gb|ADI45739.1| phytochrome A [Cleghornia malaccensis]
Length = 476
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/474 (85%), Positives = 442/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HV+VLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVRVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCH QYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHSQYMENMNSIASLVMAVVINDGDDEGESSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGI +QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIXSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G+TP+DFQL+DI+SWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRVGITPSDFQLNDILSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDTVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VV+TRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVRTRSLPWKDYEMDAIHSLQLILRNSFKEVDASECETKTIHNKLTDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKI ELTGL VD+AIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKITELTGLPVDEAIGKHLLTLVEDLS 474
>gi|406685545|gb|AFS51213.1| phytochrome P, partial [Podocarpus lawrencei]
Length = 660
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/662 (61%), Positives = 518/662 (78%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FTA SA AL+KA ++SL+NPI VH + SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTASSARALEKAATAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIP+A+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPRASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + +++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECLEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|297524113|gb|ADI45773.1| phytochrome A [Papuechites aambe]
Length = 476
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/474 (86%), Positives = 443/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVLSEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+H+KVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D+ PQK KRLWGLVVCHNTTP FV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGESSDSAQPQKXKRLWGLVVCHNTTPXFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDA LGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAALGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI ++G+TP DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHQMGITPTDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFL+
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLD 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVDGSECETKTIHNKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVDVDGLVNGWNTKI+ELTGLSVD+AIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDVDGLVNGWNTKISELTGLSVDEAIGKHLLTLVEDLS 474
>gi|406685515|gb|AFS51198.1| phytochrome P, partial [Dacrydium elatum]
Length = 660
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/662 (62%), Positives = 519/662 (78%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS-----VGDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IA+S+NA E+L ++ +VPS +G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT A AL+KA ++SL+NPI VH + SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSGARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS KLA +AI+RLQSLPSG + LCDT++++V ELTGYDRV+ YK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVVVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLAEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GI+TQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
LV + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNA +SRD DN+
Sbjct: 599 HDLVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKEKEAIYLVVNAGSSRDYTDNI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|297524014|gb|ADI45725.1| phytochrome A [Aganosma wallichii]
Length = 476
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/474 (86%), Positives = 443/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVLSEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNT+PRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGEGSDSAQPQKRKRLWGLVVCHNTSPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE Q++EKNIL+TQTLLCDMLMRDAPLGIV+Q+PNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELESQLVEKNILKTQTLLCDMLMRDAPLGIVSQNPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRMGTTPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS A+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHAAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSL WKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLHWKDYEMDAIHSLQLILRNSFKEVDVSESETKTIHNKLHDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDLS 474
>gi|297524040|gb|ADI45738.1| phytochrome A [Chonemorpha fragrans]
Length = 476
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/474 (86%), Positives = 440/474 (92%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEI K
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEIAK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRK+LWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGEGSDSAQPQKRKKLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE Q++EKNIL+TQTLLCDMLMRDAPLGIV+Q+PNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQLVEKNILKTQTLLCDMLMRDAPLGIVSQNPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKN I R+G TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNTIHRMGTTPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALG VCGMAAVRIS KD +FWFRS TASEVRWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGGAVCGMAAVRISDKDWLFWFRSHTASEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVDVSKSETKTIHNKLHDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH LTLVED S
Sbjct: 421 GEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDLS 474
>gi|406685647|gb|AFS51264.1| phytochrome P, partial [Picea mariana]
Length = 656
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/660 (62%), Positives = 522/660 (79%), Gaps = 9/660 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P VL I
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSM-EQPQLEVLTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
K + ++AAGA+QS KLA +AI+RLQSLP G +E LCD++++ V ELTGYDRVM YKFH
Sbjct: 120 KTGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDSVVENVRELTGYDRVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A V+V+Q E+
Sbjct: 180 EDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVQVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM SIASLVMAV++N ++EG + + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGS-GRNSMKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEF+ Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA +LGD VCGMA+ RI+ K+ +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPGAASLGDAVCGMASARITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L DL+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHSRLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LV + S++ VK+ML A++G+EE+N++ ++T G + + + L+VNAC+SRD +N+VG
Sbjct: 597 LVLEESVERVKKMLCNAIRGEEEKNVEMILRTFGPQKQKEAVFLVVNACSSRDFTNNIVG 656
>gi|297524038|gb|ADI45737.1| phytochrome A [Beaumontia grandiflora]
Length = 476
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/476 (85%), Positives = 445/476 (93%), Gaps = 3/476 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAA AITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHG V+SEITK
Sbjct: 1 QSYKLAAXAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGXVJSEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMIFDCRAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGESSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI ++G+TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHQMGITPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSL WKDYEMDAIHSLQLILRN+FK+V + ++K+I++KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLLWKDYEMDAIHSLQLILRNSFKEVDAPEPESKTIYNKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSID 671
+EMVRLIETA+VPI AVD+DGLVNGWNTKIAELTGLSVD+AIGKH LTLVED S +
Sbjct: 421 AEMVRLIETASVPIFAVDIDGLVNGWNTKIAELTGLSVDEAIGKHLLTLVEDFSTE 476
>gi|297524163|gb|ADI45798.1| phytochrome A [Strophanthus boivinii]
Length = 476
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/474 (86%), Positives = 441/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCCAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND E+EGD++ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGEDEGDSSNSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRMGSTPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
LGD VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 DLGDAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VV+ RSLPWKDYEMD IHSLQLILRN+F +V +TK+IH+KL DL+I+G+KELEAVT
Sbjct: 361 VVRRRSLPWKDYEMDGIHSLQLILRNSFNEVEASGSETKTIHTKLNDLRIDGLKELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKI+ELTGL VD+AIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKISELTGLPVDEAIGKHLLTLVEDLS 474
>gi|380749528|gb|AFE48625.1| phytochrome A, partial [Gaultheria procumbens]
Length = 480
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/480 (85%), Positives = 442/480 (92%), Gaps = 10/480 (2%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
RSDR+TTAYLH IQKGKLIQPFGCLLALDEKTFKVIAYSENAPE+LTMV+HAVPSVGDHP
Sbjct: 1 RSDRLTTAYLHQIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHP 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VLGIG+D++TIFT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID
Sbjct: 61 VLGIGTDVRTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAI RLQSLPSGS+ RLCDTM+QEV ELTGYDRVM
Sbjct: 121 FEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSIGRLCDTMVQEVSELTGYDRVMV 180
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEV+SE+TK GLEPYLGLHYPATDIPQA+RFLFMKNKVR+I DC A+HVKV+
Sbjct: 181 YKFHDDDHGEVLSEVTKPGLEPYLGLHYPATDIPQASRFLFMKNKVRIICDCHAKHVKVI 240
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP------ 355
QD+KLPFDLTLCGSTLRAPHSCH QYMENMNSIASLVM+VVVN+ +EEG+
Sbjct: 241 QDDKLPFDLTLCGSTLRAPHSCHSQYMENMNSIASLVMSVVVNEGDEEGEGEGEGEPSDT 300
Query: 356 ----QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILR 411
QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKNILR
Sbjct: 301 ANQQQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILR 360
Query: 412 TQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWL 471
TQTLLCDMLMRDAPLGIV+QSPN+MDLVKCDGA LLYK I+R+G TP DFQL DIVSWL
Sbjct: 361 TQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKKNIYRMGATPTDFQLRDIVSWL 420
Query: 472 SEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
SEYHMDSTGLS DSLYDAGY GALALGD VCGMAAVRI+ DM+FWFR+ TA+E+RWGGA
Sbjct: 421 SEYHMDSTGLSTDSLYDAGYPGALALGDGVCGMAAVRITTNDMLFWFRACTAAEIRWGGA 480
>gi|406685653|gb|AFS51267.1| phytochrome P, partial [Pseudolarix amabilis]
Length = 656
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/660 (62%), Positives = 520/660 (78%), Gaps = 9/660 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P L I
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEEITFRIIAYSENAVEMLDLAPQSVPSM-EQPQPETLTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA +L+KA E+SLLNPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAASAHSLEKAALAQEISLLNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
+ + M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGYDRVM YKFH
Sbjct: 120 RTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM S+ASLVMAV++N ++E + + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMSNMGSVASLVMAVIINGNDDEAGGS-GRNSMKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+IL+TQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPAEAQIKDIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA LGD VCGMA+ RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPGAATLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +H++L DL+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDID--DSGTKTMVHARLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDPNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LV + S++ V++MLY AL+G+EE+N++ ++T G + + + L+VNAC+SRD+ DN+VG
Sbjct: 597 LVFEESVERVEKMLYDALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDVTDNIVG 656
>gi|297524016|gb|ADI45726.1| phytochrome A [Alafia barteri]
Length = 476
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/474 (85%), Positives = 444/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCCAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EGDN+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGDNSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G+TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRMGLTPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
LG+ +CGMAAVRIS KD +FWFRS +A+E++WGGAKHEP EKDDGRKMHPRSSFKAFL+
Sbjct: 301 DLGNAICGMAAVRISDKDWLFWFRSHSAAEIQWGGAKHEPGEKDDGRKMHPRSSFKAFLD 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVK RSLPWKDYEMDAIHSLQLILRN+FK+VG + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKRRSLPWKDYEMDAIHSLQLILRNSFKEVGASESETKTIHTKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH L LVED S
Sbjct: 421 TEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLALVEDLS 474
>gi|406685559|gb|AFS51220.1| phytochrome P, partial [Podocarpus costalis]
Length = 660
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/662 (61%), Positives = 516/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHCSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685547|gb|AFS51214.1| phytochrome P, partial [Podocarpus archboldii]
Length = 660
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/662 (61%), Positives = 517/662 (78%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGY+RVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLSA
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLSA 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|297524012|gb|ADI45724.1| phytochrome A [Aganosma cymosa]
Length = 476
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/474 (86%), Positives = 443/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVLSEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNS+ASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNT+PRFV
Sbjct: 121 APHSCHLQYMENMNSVASLVMAVVINDGDDEGEGSDSAQPQKRKRLWGLVVCHNTSPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE Q++EKNIL+TQTLLCDMLMRDAPLGIV+Q+PNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELESQLVEKNILKTQTLLCDMLMRDAPLGIVSQNPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRMGTTPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS A+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHAAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSL WKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLHWKDYEMDAIHSLQLILRNSFKEVDVSESETKTIHNKLHDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDLS 474
>gi|406685579|gb|AFS51230.1| phytochrome P, partial [Podocarpus macrophyllus]
Length = 661
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/663 (61%), Positives = 517/663 (77%), Gaps = 9/663 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VK++Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VGV 724
VGV
Sbjct: 659 VGV 661
>gi|406685555|gb|AFS51218.1| phytochrome P, partial [Podocarpus chingianus]
Length = 660
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/662 (61%), Positives = 516/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|297524121|gb|ADI45777.1| phytochrome A [Peltastes peltatus]
Length = 476
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/474 (85%), Positives = 442/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFH+DDHGEV+SE+TK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVTK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+ VKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKDVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMA+V+ND ++EG D PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAIVINDGDDEGESSDAAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRD PLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDXPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNK++ +G P+DFQL++IVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKMYPMGTIPSDFQLNEIVSWLVEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVNASETETKTIHNKLSDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH LT+VEDSS
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTIVEDSS 474
>gi|406685603|gb|AFS51242.1| phytochrome P, partial [Podocarpus spathoides]
Length = 660
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/662 (61%), Positives = 517/662 (78%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +++G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMRRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA+ ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 SIGTDVRTLFTPSSARALEKAVMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKELKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685575|gb|AFS51228.1| phytochrome P, partial [Podocarpus longifoliolatus]
Length = 660
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/662 (61%), Positives = 516/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NP+ VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPVWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGMLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSSTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|297524171|gb|ADI45802.1| phytochrome A [Toxocarpus villosus]
Length = 476
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/474 (86%), Positives = 444/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAA AITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK
Sbjct: 1 QSYKLAAXAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+ VKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKQVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVND-EEEEG--DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSI+SLVMAVV+ND +EEEG D+ QKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSISSLVMAVVINDGDEEEGISDSAQLQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIIEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G+TP+D QL+DIVSW EYHMDSTGLS DSL DAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRMGITPSDIQLNDIVSWFIEYHMDSTGLSTDSLQDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALG+ VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGNAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + ++K+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVDASESESKTIHNKLNDLQIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
SEMVRLIETA+VPILA+D+DGLVNGWNTKIAELTGLSVD+AIGKHFLTLVEDSS
Sbjct: 421 SEMVRLIETASVPILAIDIDGLVNGWNTKIAELTGLSVDEAIGKHFLTLVEDSS 474
>gi|380749532|gb|AFE48627.1| phytochrome A, partial [Rhododendron groenlandicum]
Length = 483
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/483 (84%), Positives = 439/483 (90%), Gaps = 13/483 (2%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
RSDRVTTAYLH IQKGKLIQPFGCLLALDEKTF+VIAYSENAPE+LTMV+H VPSVGDHP
Sbjct: 1 RSDRVTTAYLHQIQKGKLIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHTVPSVGDHP 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VLGIG+D++TIFT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID
Sbjct: 61 VLGIGTDVRTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGS++RLCDTM+QEVFELTGY+RVM
Sbjct: 121 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSIQRLCDTMVQEVFELTGYERVMV 180
Query: 242 YKFHEDDHGEVVSEITK---SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
YKFH+DDHGEV+SE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HV
Sbjct: 181 YKFHDDDHGEVISEVTKPRVPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCNAKHV 240
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN----------DEEE 348
KV+QD+KLPFDLTLCGS LRAPHSCH QYMENMNSIASLVM+VVVN + E
Sbjct: 241 KVIQDDKLPFDLTLCGSALRAPHSCHSQYMENMNSIASLVMSVVVNEGDEEGEGEGEGER 300
Query: 349 EGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKN 408
+ QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKN
Sbjct: 301 SDPASQQQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKN 360
Query: 409 ILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIV 468
ILRTQTLLCDMLMRDAPLGIV+QSPNIMDLVKCDGA LLYKNKI R+G TP D QL DIV
Sbjct: 361 ILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAVLLYKNKIHRMGATPTDLQLRDIV 420
Query: 469 SWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRW 528
SWLSEYH DSTGLS DSL+DAGY GALALGD VCGMAAVRI+P DM+FWFR+ TA+E+RW
Sbjct: 421 SWLSEYHTDSTGLSTDSLHDAGYPGALALGDGVCGMAAVRITPNDMLFWFRAHTAAEIRW 480
Query: 529 GGA 531
GA
Sbjct: 481 SGA 483
>gi|297524085|gb|ADI45759.1| phytochrome A [Ichnocarpus frutescens]
Length = 476
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/474 (86%), Positives = 442/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFEL GYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELMGYDRVMTYKFHEDDHGEVLSEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNT+PRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGEASDSAQPQKRKRLWGLVVCHNTSPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE Q++EKNIL+TQTLLCDMLMRDAPLGIV+Q+PNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELESQLVEKNILKTQTLLCDMLMRDAPLGIVSQNPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRMGTTPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS A+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHAAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSL WKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLHWKDYEMDAIHSLQLILRNSFKEVDVSESETKTIHNKLHDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDLS 474
>gi|406685639|gb|AFS51260.1| phytochrome P, partial [Larix kaempferi]
Length = 655
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/660 (62%), Positives = 519/660 (78%), Gaps = 10/660 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P L I
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSM-EQPQPEFLTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
K + M+AAGA+QS KLA +AI+RLQS P G + LCDT+++ V ELTGY+RVM YKFH
Sbjct: 120 KTGDAFMSAAGAVQSQKLAVRAISRLQSPPCGDIGLLCDTVVENVRELTGYERVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFTQNRVRMICDCMATPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM S+ASLVMAV++N ++EG + + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGS-GRNSMKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+ILR QTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRIQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 MGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA +LGD VCGMA+ RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L DL+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHSRLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
++GM EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 537 LQGMDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQD 596
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LV + S++ V++MLY AL+G+EE+N++ ++T G + + + L+VNAC+SRD DN+VG
Sbjct: 597 LVFEESVERVEKMLYNALRGEEEKNVEMMLRTFGPQ-KQEAVFLVVNACSSRDFTDNIVG 655
>gi|406685589|gb|AFS51235.1| phytochrome P, partial [Podocarpus polyspermus]
Length = 660
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/662 (61%), Positives = 516/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NP+ VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPVWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685561|gb|AFS51221.1| phytochrome P, partial [Podocarpus cunninghamii]
Length = 660
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/662 (61%), Positives = 516/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH + SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAATAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDD R+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDSRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + +++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECLEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|297524034|gb|ADI45735.1| phytochrome A [Artia balansae]
Length = 476
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/474 (85%), Positives = 441/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAA AITRLQSL SGSMERLCDTM+QEVFELTGYDRVMAYKFH+DDHGEV+SEITK
Sbjct: 1 QSYKLAAXAITRLQSLSSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGESSDAAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNK+ ++G TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKMHQMGTTPSDFQLNDIVSWLVEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALG VCGMAAV+IS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGGAVCGMAAVKISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVK+RSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKSRSLPWKDYEMDAIHSLQLILRNSFKEVNASETETKTIHNKLSDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPI AVD+DGLVNGWNTKIAELTGL VD+AIGKH LTLVEDSS
Sbjct: 421 AEMVRLIETASVPIFAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDSS 474
>gi|297524054|gb|ADI45745.1| phytochrome A [Elytropus chilensis]
Length = 476
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/474 (85%), Positives = 442/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAA AITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAXAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APH CHLQYMENM SIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHGCHLQYMENMKSIASLVMAVVINDGDDEGEISDSVQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI ++G+TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHQMGITPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD CGMAAVRIS KD +FWFRS TASE++WGGAKHEP EKDDGRKM+PRSSFKAFL+
Sbjct: 301 ALGDAFCGMAAVRISDKDWLFWFRSHTASEIQWGGAKHEPGEKDDGRKMNPRSSFKAFLD 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FKDVG + +TK+IH KL DL+++G++ELEA+T
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKDVGASESETKTIHKKLNDLRVDGLQELEALT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILA+D+DG VNGWNTKIAELTGL VD+AIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAIDIDGSVNGWNTKIAELTGLPVDEAIGKHLLTLVEDLS 474
>gi|406685595|gb|AFS51238.1| phytochrome P, partial [Podocarpus rubens]
Length = 660
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/662 (61%), Positives = 516/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGY+RVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|297524157|gb|ADI45795.1| phytochrome A [Sindechites chinensis]
Length = 476
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/476 (85%), Positives = 445/476 (93%), Gaps = 3/476 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGESPDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKC+GAALLYKN+I ++G+TP+D QL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCEGAALLYKNQIHQMGITPSDLQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALG VCGMAAVR+S KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGHAVCGMAAVRLSDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKD+EMDAIHSLQLILRN+FK+ G + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDHEMDAIHSLQLILRNSFKEAGAPEAETKTIHNKLNDLQIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSID 671
+EMVRLIETA+VPILAVD+D LVNGWNTKIAELTGL VD+AIGKH LTLVED S +
Sbjct: 421 AEMVRLIETASVPILAVDIDLLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDFSTE 476
>gi|406685563|gb|AFS51222.1| phytochrome P, partial [Podocarpus dispermus]
Length = 660
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/662 (61%), Positives = 515/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNGVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|297524028|gb|ADI45732.1| phytochrome A [Anodendron oblongifolium]
Length = 476
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/474 (85%), Positives = 442/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGS+ERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGECSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAP+GIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPVGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G+ P+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRMGIAPSDFQLNDIVSWLVEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
A+G+ VCGMAAVRIS KD +FWFR TA+EVRWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 AIGETVCGMAAVRISDKDWLFWFRLHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + + ++IHSKL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVDASESEARTIHSKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AI KH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIEKHLLTLVEDLS 474
>gi|297524125|gb|ADI45779.1| phytochrome A [Petopentia natalensis]
Length = 476
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/474 (86%), Positives = 441/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYD VM YKFHEDDHGEV+SEI K
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDXVMTYKFHEDDHGEVISEIAK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+H KVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHAKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGNSSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+Q+PNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQNPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI +G +P+D QL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHLMGTSPSDSQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+++RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAADIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVEAPESETKTIHTKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVDVDGLVNGWNTKIAELTGL VD+AIGKH LTLVEDSS
Sbjct: 421 AEMVRLIETASVPILAVDVDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDSS 474
>gi|406685601|gb|AFS51241.1| phytochrome P, partial [Podocarpus salomonensis]
Length = 660
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/661 (61%), Positives = 513/661 (77%), Gaps = 7/661 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA+ ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 SIGTDVRTLFTPSSARALEKAVMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTAWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKELKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDL 603
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ T +H++L DL
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDGSGTKTM-VHARLTDL 539
Query: 604 KIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL- 662
K++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 540 KLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVH 599
Query: 663 TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVV 722
+V + S V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+V
Sbjct: 600 DVVLEESAGCVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENIV 659
Query: 723 G 723
G
Sbjct: 660 G 660
>gi|406685655|gb|AFS51268.1| phytochrome P, partial [Pseudotsuga menziesii]
Length = 656
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/660 (62%), Positives = 518/660 (78%), Gaps = 9/660 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P VL I
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSM-EQPQPEVLTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA++L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAASANSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
K + M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGYDRVM YKFH
Sbjct: 120 KTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VK++Q E+
Sbjct: 180 EDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKLIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM S+ASLVMAV++N ++EG + + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGS-GRNSMKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA +LGD VCGMA+ I+ K+ +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPGAASLGDAVCGMASAIITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RS PW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L DL+
Sbjct: 479 PRSSFKAFLEVVKRRSFPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHSRLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
++GM EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+ +
Sbjct: 537 LQGMDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMSMSLVQD 596
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LV + S+ V++ML AL+G+EE+N++ ++T G + + + L+VNAC+SRD DN+VG
Sbjct: 597 LVFEESVQRVEKMLNNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|297524018|gb|ADI45727.1| phytochrome A [Alafia thouarsii]
Length = 476
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/474 (85%), Positives = 443/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVTSEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCCAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EGDN+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGDNSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI ++G+TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHQMGLTPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
LG+ +CGMAAVRIS KD +FWFRS +A+E++WGGAKHEP EKDDGRKMHPRSSFKAFL+
Sbjct: 301 DLGNAICGMAAVRISDKDWLFWFRSHSAAEIQWGGAKHEPGEKDDGRKMHPRSSFKAFLD 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVK RSLPWKDYEMDAIHSLQLILRN+FK+VG + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKRRSLPWKDYEMDAIHSLQLILRNSFKEVGASESETKTIHTKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH L LVED S
Sbjct: 421 TEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLALVEDLS 474
>gi|297524137|gb|ADI45785.1| phytochrome A [Rhabdadenia biflora]
Length = 476
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/474 (85%), Positives = 442/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKV+QD KL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVIQDGKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENM+SIASLVMAVV+ND ++EGD + PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMDSIASLVMAVVINDGDDEGDRSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI +G+TP++ QL+DIVSWL EYHMDSTGLS DSL DAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHHMGITPSEXQLNDIVSWLIEYHMDSTGLSTDSLSDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFR+ TA+EVRWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRAHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDA HSLQLILRN+FK+V D +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDATHSLQLILRNSFKEVEASDSETKAIHTKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKHFLTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHFLTLVEDLS 474
>gi|406685553|gb|AFS51217.1| phytochrome P, partial [Podocarpus brassii]
Length = 660
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/662 (61%), Positives = 516/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGY+RVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DA Y GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADASYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S++ V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESVECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|297524135|gb|ADI45784.1| phytochrome A [Rhabdadenia biflora]
Length = 476
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/474 (85%), Positives = 442/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLF KNKVRMI DCRA+HV V+QDEKL FDLT CGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFTKNKVRMICDCRAKHVNVIQDEKLAFDLTFCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENM+SIASLVMAVV+ND ++EGDN+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMDSIASLVMAVVINDGDDEGDNSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKE+ELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKEIELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI RLG+ P++FQL+DIVSWL EYH DSTGLS DSL DAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRLGIAPSNFQLNDIVSWLIEYHKDSTGLSTDSLSDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS K+ +FWFR+ TA+EVRWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKEWLFWFRAHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPW+DYEMDAIHSLQLILRN+FK+V D +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWRDYEMDAIHSLQLILRNSFKEVEASDSETKAIHTKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKHFLTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHFLTLVEDLS 474
>gi|406685583|gb|AFS51232.1| phytochrome P, partial [Podocarpus neriifolius]
Length = 660
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/662 (61%), Positives = 515/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGY+RVM YK
Sbjct: 121 PRRTGGAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685617|gb|AFS51249.1| phytochrome P, partial [Retrophyllum comptonii]
Length = 661
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/663 (61%), Positives = 517/663 (77%), Gaps = 9/663 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+L ++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH + SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS K A +AI+RLQSLP+ + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTCDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FP+RYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPMRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W L VTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLAVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGATTLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VGV 724
VGV
Sbjct: 659 VGV 661
>gi|297524167|gb|ADI45800.1| phytochrome A [Temnadenia violacea]
Length = 476
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/474 (85%), Positives = 439/474 (92%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFH+DDHGEV+SE+TK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVTK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+ VKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKDVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVND---EEEEGDNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND E E D PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEXESSDAAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNK+ ++G TPNDFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKMHQMGTTPNDFQLNDIVSWLVEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDD RKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDSRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVNASETETKTIHNKLSDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELT L VD+AI KH LT+VE+SS
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTDLPVDEAITKHLLTVVEESS 474
>gi|297524030|gb|ADI45733.1| phytochrome A [Anodendron paniculatum]
Length = 476
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/474 (85%), Positives = 440/474 (92%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATD+PQAARFLFMKNKVRMI DC A+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDVPQAARFLFMKNKVRMICDCHAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGECSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G+ P+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRMGIAPSDFQLNDIVSWLVEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
A+G+ VCGMAAVRIS KD +FWFR TA+EVRWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 AIGEAVCGMAAVRISDKDWLFWFRLHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+ K+V + + ++IHSKL DL+I+G++ELE VT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSSKEVNASESEARTIHSKLNDLRIDGLQELETVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDLS 474
>gi|297524131|gb|ADI45782.1| phytochrome A [Prestonia coalita]
Length = 476
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/474 (85%), Positives = 440/474 (92%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFH+DDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKVLQ +KL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVLQXDKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNS+ASLVMAVV+ND ++EG D PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSVASLVMAVVINDGDDEGETSDAAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKN + R+G TP+DF L+DIVSWL EYHMDSTGLS DSL DAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNXMHRMGTTPSDFHLNDIVSWLVEYHMDSTGLSTDSLCDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALG VCGMAAVRIS KD +FWFRS TA+EVRWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGGAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVNASETETKTIHNKLSDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH LTLVEDSS
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDSS 474
>gi|406685643|gb|AFS51262.1| phytochrome P, partial [Picea breweriana]
Length = 656
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/660 (62%), Positives = 519/660 (78%), Gaps = 9/660 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P VL I
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSM-EQPQLEVLTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
K + ++AAGA+QS KLA +AI+RLQSLP G +E LCDT+++ V ELTGYDRVM YKFH
Sbjct: 120 KTGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDTVVENVRELTGYDRVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A V+V+Q E+
Sbjct: 180 EDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVQVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM SIASLVMAV++N ++EG + + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGS-GRNSMKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEF+ Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA LGD VCGMA+ I+ KD +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPGAAFLGDAVCGMASATITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L L+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHSRLNILR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LV + S++ V++ML AL+G+EE+N++ ++T G + + + L+VNAC+SRD DN+VG
Sbjct: 597 LVFEESVERVEKMLCNALRGEEEKNVEMILRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685619|gb|AFS51250.1| phytochrome P, partial [Retrophyllum minus]
Length = 660
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/662 (61%), Positives = 516/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G I PFGC+L ++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGXIXPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH + SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GI+TQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGATTLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+S D +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSXDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685663|gb|AFS51272.1| phytochrome P, partial [Tsuga diversifolia]
Length = 656
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/660 (62%), Positives = 518/660 (78%), Gaps = 9/660 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P L I
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSM-EQPQPEALTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTAPSA +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAPSAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
+ + M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGYDRVM YKFH
Sbjct: 120 RTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HG VV+EI +S LEPYLGLHYPATDIPQA RFLFM+N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGVVVAEIRRSDLEPYLGLHYPATDIPQAFRFLFMQNRVRMICDCMATPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM S+ASLVMAV++N ++E + + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGS-GRNSMKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+IL+TQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA +LGD VCGMA+ I+ KD +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +H++L D++
Sbjct: 479 PRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIN--DSGTKTMVHARLNDMR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LV + S++ V++MLY AL+G+EE+N++ ++T G + + + L+VNAC+SRD DN+VG
Sbjct: 597 LVFEESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685549|gb|AFS51215.1| phytochrome P, partial [Podocarpus aristulatus]
gi|406685591|gb|AFS51236.1| phytochrome P, partial [Podocarpus purdieanus]
Length = 660
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/662 (61%), Positives = 514/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEAL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH + SGKPF AIVHR+ +++D E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVVDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A V V+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSRTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + + V++MLY AL+G+EE+N++ +++T G+ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTVKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685577|gb|AFS51229.1| phytochrome P, partial [Podocarpus lucienii]
Length = 660
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/662 (61%), Positives = 515/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VK++Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ K +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKGFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685605|gb|AFS51243.1| phytochrome P, partial [Podocarpus spinulosus]
Length = 660
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/662 (61%), Positives = 515/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGVVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRGSGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W +GVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCVGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685593|gb|AFS51237.1| phytochrome P, partial [Podocarpus ramosii]
Length = 660
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/662 (61%), Positives = 515/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGY+RVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
VVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 SVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685565|gb|AFS51223.1| phytochrome P, partial [Podocarpus drouynianus]
Length = 660
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/662 (61%), Positives = 515/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM +K
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVFK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LV CH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVGCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685569|gb|AFS51225.1| phytochrome P, partial [Podocarpus fasciculus]
Length = 660
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/662 (61%), Positives = 514/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VK++Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++ LY AL+G+EE+N++ ++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKTLYRALRGEEEKNVEIRLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685497|gb|AFS51189.1| phytochrome P, partial [Afrocarpus usambarensis]
Length = 660
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/662 (61%), Positives = 516/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+L ++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+F SA AL+KA ++SL+NPI VH + SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFKPFSARALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W L VTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685651|gb|AFS51266.1| phytochrome P, partial [Pinus elliottii]
Length = 656
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/660 (62%), Positives = 515/660 (78%), Gaps = 9/660 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P VL I
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSM-EQPQQDVLTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++ID EP+
Sbjct: 60 GTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
+ + M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGYDRVM YKFH
Sbjct: 120 RTGDAFMSAAGAVQSQKLAVRAISRLQSLPGGDVGLLCDTVVENVRELTGYDRVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM SIASLVMAV++N +EEG + + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGGGS-GRNSMKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEFL Q + +N EL+L Q+ EK+IL+TQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+G VTQSP+I DLVKCDGAAL Y W GVTP + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 MGTVTQSPSIRDLVKCDGAALYYGGMCWMXGVTPTEAQIKDIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA +LGD VCGMA+ RI+ KD FWFRS TA E++WGGAKH PD+KDD R+MH
Sbjct: 419 LADAGYPGAASLGDAVCGMASARITSKDFPFWFRSHTAKEMKWGGAKHHPDDKDDARRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L DL+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHSRLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
++GM EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G +
Sbjct: 537 LQGMDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LV + S++ V++ML+ AL+G+EE+N++ +KT G + + + L+VNAC+SRD DN+VG
Sbjct: 597 LVFEESVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNIVG 656
>gi|406685471|gb|AFS51176.1| phytochrome P, partial [Araucaria laubenfelsii]
Length = 677
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/679 (61%), Positives = 520/679 (76%), Gaps = 26/679 (3%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV----------- 117
AYL +Q+G IQPFGC+LA++E TF +IAYSENA E+L ++ +VP++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G V+ IG+D++T+FT SA AL+KA E+SL+NPI VH K + KPFYAIVHR+
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 178 LIIDFEPVKPY-----EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFE 232
+++D EPV+ + ++AAGA+QS KLA +AI+RLQSLP+G + LCDT++++V E
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 233 LTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVD 292
LTGYDRVM YKFHED+HGEV++EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 293 CRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN 352
CRA VKV+Q E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N E+EG
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 353 TLPQKRK------RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILE 406
+LWGLVVCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 407 KNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHD 466
K+ILRTQTLLCDML+RDAP+GIVT SP+IMDLVKCDGAAL Y W LGVTP + Q+ D
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 467 IVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEV 526
I WL EYH+DSTGLS DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 527 RWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDV 586
+WGGAKH PD+KDDGR+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 587 GTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKI 645
D +TK+ +H++L DLK++G+ EL V SEMVRLIETAT PILAVD +GL+NGWN K+
Sbjct: 541 D--DSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKV 598
Query: 646 AELTGLSVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDP 704
AELTGL V +A+GK + L+ + S +TV +MLY AL+G+EE+N++ +++T G +
Sbjct: 599 AELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYQALRGEEEKNVEIKLRTFGPQKQKKA 658
Query: 705 ITLIVNACASRDLHDNVVG 723
I L+VNAC+SRD DN+VG
Sbjct: 659 IYLVVNACSSRDYTDNIVG 677
>gi|406685551|gb|AFS51216.1| phytochrome P, partial [Podocarpus bracteatus]
Length = 660
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/662 (61%), Positives = 514/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGY+RVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A KV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPAKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LG TP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGATPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685475|gb|AFS51178.1| phytochrome P, partial [Araucaria montana]
Length = 677
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/679 (61%), Positives = 520/679 (76%), Gaps = 26/679 (3%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV----------- 117
AYL +Q+G IQPFGC+LA++E TF +IAYSENA E+L ++ +VP++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G V+ IG+D++T+FT SA AL+KA E+SL+NPI VH K + KPFYAIVHR+
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 178 LIIDFEPVKPY-----EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFE 232
+++D EPV+ + ++AAGA+QS KLA +AI+RLQSLP+G + LCDT++++V E
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 233 LTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVD 292
LTGYDRVM YKFHED+HGEV++EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 293 CRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN 352
CRA VKV+Q E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N E+EG
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 353 TLPQKRK------RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILE 406
+LWGLVVCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 407 KNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHD 466
K+ILRTQTLLCDML+RDAP+GIVT SP+IMDLVKCDGAAL Y W LGVTP + Q+ D
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 467 IVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEV 526
I WL EYH+DSTGLS DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 527 RWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDV 586
+WGGAKH PD+KDDGR+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 587 GTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKI 645
D +TK+ +H++L DLK++G+ EL V SEMVRLIETAT PILAVD +GL+NGWN K+
Sbjct: 541 D--DSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKV 598
Query: 646 AELTGLSVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDP 704
AELTGL V +A+GK + L+ + S +TV +MLY AL+G+EE+N++ +++T G +
Sbjct: 599 AELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKA 658
Query: 705 ITLIVNACASRDLHDNVVG 723
I L+VNAC+SRD DN+VG
Sbjct: 659 IYLVVNACSSRDYTDNIVG 677
>gi|406685571|gb|AFS51226.1| phytochrome P, partial [Podocarpus guatemalensis]
Length = 660
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/662 (61%), Positives = 514/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLGLMPQSVPTMELGKHGGGEAL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH + SGKPF AIVHR+ +++ E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVVGLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A V V+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSRTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEECAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|297524083|gb|ADI45758.1| phytochrome A [Holarrhena curtisii]
Length = 476
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/474 (85%), Positives = 441/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCCAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EGD++ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGDSSESAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGA+LLYKNK+ R+G P+D QL+DIVSWL EYH+DSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGASLLYKNKVHRIGSAPSDIQLNDIVSWLIEYHVDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+IEG++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVEASESETKTIHTKLNDLRIEGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA VPILAVD+DGLVNGWN+KIAELT L VD+AIGKH L+LVED S
Sbjct: 421 AEMVRLIETALVPILAVDIDGLVNGWNSKIAELTCLPVDEAIGKHLLSLVEDLS 474
>gi|406685665|gb|AFS51273.1| phytochrome P, partial [Tsuga heterophylla]
Length = 656
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/660 (61%), Positives = 517/660 (78%), Gaps = 9/660 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P L I
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSM-EQPQPEALTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAASAHSLEKAAMAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
+ + M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V EL GYDRVM YKFH
Sbjct: 120 RTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELAGYDRVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM SIASLVMAV++N ++E + + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEAGGS-GRNSMKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+IL+TQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGV P + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVAPTEAQIKDIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA +LGD VCGMA+ RI+ K+ +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPGAASLGDAVCGMASARITSKNFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK SLPW + E+DAIHSLQLILR +F+D+ D TK+ +H++L DL+
Sbjct: 479 PRSSFKAFLEVVKRGSLPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHARLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LV + S++ V++MLY AL+G+EE+N++ ++T G + + + L+VNAC+SRD DN+VG
Sbjct: 597 LVFEESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685495|gb|AFS51188.1| phytochrome P, partial [Afrocarpus mannii]
Length = 660
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/662 (61%), Positives = 515/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+L ++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+F SA AL+KA ++SL+NPI VH + SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFKPFSARALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W L VTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIRDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+ RD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSXRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685531|gb|AFS51206.1| phytochrome P, partial [Nageia formosensis]
Length = 660
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/663 (61%), Positives = 518/663 (78%), Gaps = 11/663 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
+G+D++T+FT SA AL+KA ++SL+NPI V+ + SGKPF AIVHR+ ++ID E
Sbjct: 61 TLGTDVRTLFTPSSARALEKAAMAPDISLMNPICVYSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLG HYPATDIPQA+RFLFM+N+VRMI DC A V V+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGSHYPATDIPQASRFLFMQNRVRMICDCSATPVTVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DIV WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIVEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RS PW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSSPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK +G+ EL +V +EMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKYQGIDELSSVATEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 --TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
++EDS+ + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N
Sbjct: 599 HDVVLEDSA-ECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 721 VVG 723
+VG
Sbjct: 658 IVG 660
>gi|406685493|gb|AFS51187.1| phytochrome P, partial [Afrocarpus gracilior]
Length = 660
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/662 (61%), Positives = 515/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+L ++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++ +F SA AL+KA ++SL+NPI VH + SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRILFKPFSARALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W L VTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685477|gb|AFS51179.1| phytochrome P, partial [Araucaria muelleri]
Length = 677
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/679 (60%), Positives = 519/679 (76%), Gaps = 26/679 (3%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV----------- 117
AYL +Q+G IQPFGC+LA++E TF +IAYSENA E+L ++ +VP++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G V+ IG+D++T+FT SA AL+KA E+SL+NPI VH K + KPFYAIVHR+
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 178 LIIDFEPVKPY-----EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFE 232
+++D EPV+ + ++AAGA+QS KLA +AI+RLQSLP+G + LCDT++++V E
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 233 LTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVD 292
LTGYDRVM YKFHED+HGEV++EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 293 CRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN 352
CRA VKV+Q E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N E+EG
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 353 TLPQKRK------RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILE 406
+LWGLVVCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 407 KNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHD 466
K+ILRTQTLLCDML+RDAP+GIVT SP+IMDLVKCDGA L Y W LGVTP + Q+ D
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGATLYYGGMCWMLGVTPTEAQIKD 420
Query: 467 IVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEV 526
I WL EYH+DSTGLS DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 527 RWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDV 586
+WGGAKH PD+KDDGR+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 587 GTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKI 645
D +TK+ +H++L DLK++G+ EL V SEMVRLIETAT PILAVD +GL+NGWN K+
Sbjct: 541 D--DSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKV 598
Query: 646 AELTGLSVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDP 704
AELTGL V +A+GK + L+ + S +TV +MLY AL+G+EE+N++ +++T G +
Sbjct: 599 AELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKA 658
Query: 705 ITLIVNACASRDLHDNVVG 723
I L+VNAC+SRD DN+VG
Sbjct: 659 IYLVVNACSSRDYTDNIVG 677
>gi|406685587|gb|AFS51234.1| phytochrome P, partial [Podocarpus oleifolius]
Length = 660
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/662 (61%), Positives = 515/662 (77%), Gaps = 9/662 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+FT SA AL+KA ++SL+NPI VH SGKPF AIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P + + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFL M+N+VRMI DC A VK++Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLSMQNRVRMICDCSATPVKMIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N ++EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGDDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+ R V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
M PRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MRPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLTD 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK++G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 -TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNV 721
+V + S + V++MLY AL+G+EE+N++ +++T G++ + I L+VNAC+SRD +N+
Sbjct: 599 HDVVLEESAECVEKMLYRALRGEEEKNVEIKLRTFGTQKQKEAIYLVVNACSSRDYTENI 658
Query: 722 VG 723
VG
Sbjct: 659 VG 660
>gi|406685519|gb|AFS51200.1| phytochrome P, partial [Lagarostrobos franklinii]
Length = 643
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/645 (62%), Positives = 512/645 (79%), Gaps = 5/645 (0%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG-DHPVLGIGS 127
AYL +Q+G IQPF C+LA++E FK+IAYS+NA E+L ++ +VP++ VL IG+
Sbjct: 1 AYLSRMQRGGTIQPFSCMLAVEETNFKIIAYSQNALEMLDIMPQSVPNMDLGKSVLTIGT 60
Query: 128 DIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKP 187
D++T+FT SA AL+KA E+SL+NPI VH + +GKPFYAIVHR+ ++ID EPV+
Sbjct: 61 DVRTLFTPASARALEKAAMAQEISLMNPIWVHSQYTGKPFYAIVHRIDVGMVIDLEPVRT 120
Query: 188 YEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHED 247
+ M+AAGA+QS KLA +AI+RLQSLP+G + LCD+++++V ELTGYDRVM YKFHED
Sbjct: 121 GDAAMSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDSVVEDVRELTGYDRVMVYKFHED 180
Query: 248 DHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLP 307
+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A V+V+Q E+L
Sbjct: 181 EHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVQVIQSEELR 240
Query: 308 FDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVC 367
L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG T + +LWGLVVC
Sbjct: 241 QPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGAGTSGRSSMKLWGLVVC 300
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RDAP+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS DSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPAEAQIKDIADWLLEYHGDSTGLSTDSLA 420
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIE 606
SSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D +TK+ +H++L DLK++
Sbjct: 481 SSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSNTKTMVHARLNDLKLQ 538
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL-TLV 665
G+ EL +V SEMVRLIETAT PILA+D +GLVNGWN K+AELTGL V +A+GK + L+
Sbjct: 539 GIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHDLI 598
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVN 710
+ S ++V++MLY AL+G+EE+N++ +++T G + + I L+VN
Sbjct: 599 LEESAESVEKMLYKALRGEEEKNVEIKLRTFGPQKQKEVIYLVVN 643
>gi|380749516|gb|AFE48619.1| phytochrome A, partial [Arctostaphylos columbiana]
Length = 477
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/477 (84%), Positives = 441/477 (92%), Gaps = 7/477 (1%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
RSD+VTTAYLH IQKGKLIQPFGCLLALDE F+VIAYSENAPE+LTMV+HAVPSVGDHP
Sbjct: 1 RSDKVTTAYLHQIQKGKLIQPFGCLLALDENNFRVIAYSENAPEMLTMVSHAVPSVGDHP 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VLGIG+D+ TIFT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVT SLIID
Sbjct: 61 VLGIGTDVGTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTSSLIID 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSG+M+RLCDTM+QEVFELTGYDRVMA
Sbjct: 121 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMKRLCDTMVQEVFELTGYDRVMA 180
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEV SE+TK GLEP+LGLHYPATD+PQAARFLFMKNKVRMI DC A++VKV+
Sbjct: 181 YKFHDDDHGEVFSELTKPGLEPFLGLHYPATDVPQAARFLFMKNKVRMICDCNAKNVKVI 240
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN-------TL 354
QD+KLP DLTLCGSTLRAPHSCH+QYMENMNSIASLVM+VVVN+ +EEG+ +
Sbjct: 241 QDDKLPIDLTLCGSTLRAPHSCHVQYMENMNSIASLVMSVVVNEGDEEGEGGESSDPASQ 300
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
QK KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKNILRTQT
Sbjct: 301 QQKTKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQT 360
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV++SPN+MDLVKCDGA LLYK+KI+R+G TP DFQL DIVSWLSEY
Sbjct: 361 LLCDMLMRDAPLGIVSESPNVMDLVKCDGAVLLYKDKIYRMGATPTDFQLRDIVSWLSEY 420
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
H DSTGLS DSLYDAGY GALALGD VCGMA VRI+ DM+FWFR+ TA+E+RWGGA
Sbjct: 421 HTDSTGLSTDSLYDAGYPGALALGDGVCGMAVVRITSDDMLFWFRAHTAAEIRWGGA 477
>gi|380749520|gb|AFE48621.1| phytochrome A, partial [Cassiope mertensiana]
Length = 478
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/478 (84%), Positives = 438/478 (91%), Gaps = 8/478 (1%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
RSDRVTTAYLH IQKGKLIQPFGCLLALD KTFKVIAYSENAPE+LTMV+HAVPSVGD P
Sbjct: 1 RSDRVTTAYLHQIQKGKLIQPFGCLLALDAKTFKVIAYSENAPEMLTMVSHAVPSVGDFP 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VLGIG+D++TIFT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID
Sbjct: 61 VLGIGTDVRTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGS+E+LCDTM QEVFELTGYDRVM
Sbjct: 121 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSIEKLCDTMAQEVFELTGYDRVMV 180
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEV+SE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKV+
Sbjct: 181 YKFHDDDHGEVLSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVI 240
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP------ 355
Q +KL FDLTLCGS LRAPHSCHLQYM NMNSIASLVM+VVVN+ +EEG+
Sbjct: 241 QSDKLQFDLTLCGSALRAPHSCHLQYMVNMNSIASLVMSVVVNEGDEEGEGEGEPSDPAN 300
Query: 356 --QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
QK+KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKNILRTQ
Sbjct: 301 QQQKKKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQ 360
Query: 414 TLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSE 473
TLLCDMLMRDAPLGIV+QSPN+MDLVKCDGA LL+KN I+R+G TP D QL DI+SWLS
Sbjct: 361 TLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLHKNNIYRMGATPTDLQLRDILSWLSV 420
Query: 474 YHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
YHMDSTGLS DSLYDAGY GALALGD VCGMAAVR +P DM+FWFR+ TA+E+RWGGA
Sbjct: 421 YHMDSTGLSTDSLYDAGYPGALALGDGVCGMAAVRTTPNDMLFWFRAHTAAEIRWGGA 478
>gi|406685631|gb|AFS51256.1| phytochrome P, partial [Abies lasiocarpa]
Length = 656
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/663 (62%), Positives = 520/663 (78%), Gaps = 15/663 (2%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L + +V S+ + P VL I
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVLSM-EQPQQEVLTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA++L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
+ + M+AAGA+QS KLA +AI+RLQSLPSG + LCDT+++ V ELTGYDRVM YKFH
Sbjct: 120 RTGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM SIASLVMAV++N ++E T + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGT-GRNSLKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+IL+TQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DS GLS DS
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSAGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA +LGD VCGMA+ RI+ K+ +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPGAASLGDAVCGMASARITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKA LEVVK RS PW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L DL+
Sbjct: 479 PRSSFKALLEVVKRRSSPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHSRLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTL 664
++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G ++L
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG---MSL 593
Query: 665 VED----SSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
V+D S++ V++MLY AL+G+EE N++ ++T G + + + L+VNAC+SRD +N
Sbjct: 594 VQDPLFEESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTEN 653
Query: 721 VVG 723
+VG
Sbjct: 654 IVG 656
>gi|406685527|gb|AFS51204.1| phytochrome P, partial [Microcachrys tetragona]
Length = 657
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/659 (61%), Positives = 517/659 (78%), Gaps = 6/659 (0%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS--VGDHPVLGIG 126
AYL +Q+G IQPFGC+LA++E FK+IA+S+NA E+L ++ +VP+ VG VL IG
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPTMEVGKGAVLTIG 60
Query: 127 SDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVK 186
+D++T+FT SA AL+KA ++SL+NPI VH + + KPF AIVHR+ ++ID EP++
Sbjct: 61 TDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYTRKPFNAIVHRIDVGIVIDLEPLR 120
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
+ M+ AGA+QS KLA +AI+R QSLPSG + LCDT++++V ELTGYDRVM YKFHE
Sbjct: 121 TGDAAMSTAGAVQSQKLAVRAISRPQSLPSGDVGLLCDTVVEDVRELTGYDRVMVYKFHE 180
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
D+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A V V+Q E+L
Sbjct: 181 DEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMIYDCTATPVNVIQSEEL 240
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVV 366
L L GSTLRAPH CH QYM NM SIASLVMAV++N ++EG T + +LWGLVV
Sbjct: 241 RQPLCLVGSTLRAPHRCHAQYMANMGSIASLVMAVIINGNDDEGGGTSGRSSMKLWGLVV 300
Query: 367 CHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPL 426
CH+T+PR V FPLRYACEFL Q F + +N EL+L Q EK+ILRTQTLLCDML+RDAP+
Sbjct: 301 CHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQWTEKHILRTQTLLCDMLLRDAPI 360
Query: 427 GIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSL 486
GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL ++H DSTGLS DSL
Sbjct: 361 GIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLQHHGDSTGLSTDSL 420
Query: 487 YDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHP 546
DAGY GA +LGD VCGMAA RI+ +D +FWFRS TA E++WGGAKH PD+KDDGR+MHP
Sbjct: 421 ADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHP 480
Query: 547 RSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKI 605
RSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L DLK+
Sbjct: 481 RSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSHTKTMVHARLNDLKL 538
Query: 606 EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL-TL 664
+G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK + L
Sbjct: 539 QGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHYL 598
Query: 665 VEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
V + S ++V++ML AL+G+EE+N++ +++T GS+ + I L+VNAC+SRD DN+VG
Sbjct: 599 VFEESAESVEKMLDRALRGEEEKNVEIKLRTFGSQKQKEAIYLVVNACSSRDYTDNIVG 657
>gi|406685629|gb|AFS51255.1| phytochrome P, partial [Abies homolepis]
Length = 656
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/663 (62%), Positives = 518/663 (78%), Gaps = 15/663 (2%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G +QPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P VL I
Sbjct: 1 AYLSRIQRGGRVQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVPSM-EQPQQEVLTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA++L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
+ + M+AAGA+QS KLA +AI+RLQSLPSG + LCDT+++ V ELTGYDRVM YKFH
Sbjct: 120 RIGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM SIASLVMAV++N ++E T + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGT-GRNSLKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+IL+TQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP Q+ I WL E+H DSTGLS DS
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTKAQIKGIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY A +LGD VCGMA RI+ KD +FWFRS TA E++WGGAKH PD+K DGR+MH
Sbjct: 419 LADAGYPSAASLGDAVCGMAPARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKGDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSS KAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L DL+
Sbjct: 479 PRSSLKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHSRLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTL 664
++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G ++L
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG---MSL 593
Query: 665 VED----SSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
V+D S++ V++MLY AL+G+EE N++ ++T G + + + L+VNAC+SRD +N
Sbjct: 594 VQDLLFEESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTEN 653
Query: 721 VVG 723
+VG
Sbjct: 654 IVG 656
>gi|297524175|gb|ADI45804.1| phytochrome A [Vallaris solanacea]
Length = 471
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/471 (85%), Positives = 441/471 (93%), Gaps = 3/471 (0%)
Query: 204 AAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEP 263
A KAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV+SEITK GLEP
Sbjct: 1 AXKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVISEITKPGLEP 60
Query: 264 YLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSC 323
YLGLHYPATDIPQA+RFLFMKNKVRMI DCRA+HVKVLQDEKL FDLTLCGSTLRAPHSC
Sbjct: 61 YLGLHYPATDIPQASRFLFMKNKVRMIFDCRAKHVKVLQDEKLSFDLTLCGSTLRAPHSC 120
Query: 324 HLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFVPFPLR 380
HLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNTTPRFVPFPLR
Sbjct: 121 HLQYMENMNSIASLVMAVVINDGDDEGESSDSAQPQKRKRLWGLVVCHNTTPRFVPFPLR 180
Query: 381 YACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVK 440
YACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNIMDLVK
Sbjct: 181 YACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNIMDLVK 240
Query: 441 CDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDV 500
CDGAALLYKNK+ ++G+TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GALALGD
Sbjct: 241 CDGAALLYKNKVHQMGITPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGALALGDA 300
Query: 501 VCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTR 560
VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLEVVKTR
Sbjct: 301 VCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTR 360
Query: 561 SLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVR 620
SL WKDYEMDAIHSLQLILRN+FK+V + ++K+I++KL DL+I+G++ELEAVT+EMVR
Sbjct: 361 SLLWKDYEMDAIHSLQLILRNSFKEVDAPEPESKTIYNKLNDLRIDGLQELEAVTAEMVR 420
Query: 621 LIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSID 671
LIETA+VPI AVD+DGLVNGWNTKIAELTGLSVD+AIGKH LTLVED S +
Sbjct: 421 LIETASVPIFAVDIDGLVNGWNTKIAELTGLSVDEAIGKHLLTLVEDFSTE 471
>gi|297524091|gb|ADI45762.1| phytochrome A [Mandevilla boliviensis]
Length = 476
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/474 (85%), Positives = 439/474 (92%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QS KLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSXKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKV+QDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVVQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APH CHLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHICHLQYMENMNSIASLVMAVVINDGDDEGESSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKN+I R+G+ P+D QL+DIVSWL EYHMD TGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNQIHRMGIIPSDSQLNDIVSWLIEYHMDXTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALG +CGMA+VRIS KD +FWFRS TA+E+RWGGAKHEP KDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGHAICGMASVRISDKDWLFWFRSHTAAEIRWGGAKHEPGGKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+VG + +TK IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVGASETETKIIHNKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKHFLTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHFLTLVEDLS 474
>gi|297524074|gb|ADI45755.1| phytochrome A [Heterostemma piperifolium]
Length = 476
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/474 (84%), Positives = 439/474 (92%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGS++RLCDTM+QEVFELTGYDRVMAYKFH+DDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSLDRLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKVLQD KL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVLQDNKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQKRKRLWGLVVCHNTTPRFV 375
APH+CHLQYMENMNSIASLVM V++ND E+EGD + PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHTCHLQYMENMNSIASLVMGVIINDGEDEGDISDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE Q++EKNIL+TQTLLCDMLMRDAPLGIV+Q+PNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQMVEKNILKTQTLLCDMLMRDAPLGIVSQNPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGA LLY NKI R+G+TP+DF L+DIVSWL EYHMDSTGLS DSL DAG+ GAL
Sbjct: 241 MDLVKCDGAVLLYNNKIHRMGITPSDFHLNDIVSWLVEYHMDSTGLSTDSLLDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD IFWFRS TA+E+RWGGAKHE EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWIFWFRSHTAAEIRWGGAKHELGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+ + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEADASEFETKTIHTKLNDLQIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWNTKI+ELTGLSVD+AIGKH L LVEDSS
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKISELTGLSVDEAIGKHLLALVEDSS 474
>gi|406685621|gb|AFS51251.1| phytochrome P, partial [Saxegothaea conspicua]
Length = 661
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/663 (60%), Positives = 516/663 (77%), Gaps = 10/663 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E F++IAYSENA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFRIIAYSENALEMLDLMPQSVPTMELGRHGGGAVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
IG+D++T+F SA A++KA +++L+NPI VH + +GKPFYAIVHR+ ++ID E
Sbjct: 61 TIGTDVRTLFIPSSARAIEKAAMAPDINLMNPIWVHSQYTGKPFYAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
PV+ + M+ AGA+QS KLA +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PVRTGDASMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYP+TDIPQA+RFLFM+N+VRMI DC VKV+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPSTDIPQASRFLFMQNRVRMICDCSTTPVKVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-RLW 362
E+L L L GSTLRAPH CH QYM NM SIASL MAV++N +EEG T + +LW
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEEGGGTTSGRSTMKLW 300
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVVCH+T+PR VPFPLRYACEFL Q F + +N E++L Q+ EK+IL TQTLLCDML+R
Sbjct: 301 GLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMEVQLAAQLTEKHILWTQTLLCDMLLR 360
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
DAP+GIV+QSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 DAPIGIVSQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLS 420
Query: 483 ADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
DSL DAGY GA +LGD VCGMAA RI+ +D +FWFRS TA E++WGGAKH PD+KDDGR
Sbjct: 421 TDSLADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDDKDDGR 480
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLC 601
+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L
Sbjct: 481 RMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHTRLN 538
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
DLK++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK
Sbjct: 539 DLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNVKVAELTGLPVGEAMGKSL 598
Query: 662 L-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ LV S ++V++MLY AL+G+EE+N++ +++T G + + I L+ NAC+S D DN
Sbjct: 599 VHDLVFQESAESVEKMLYRALRGEEEKNVEIKLRTFGPQKQKEAIYLVANACSSLDYTDN 658
Query: 721 VVG 723
+VG
Sbjct: 659 IVG 661
>gi|406685457|gb|AFS51169.1| phytochrome P, partial [Araucaria bernieri]
Length = 675
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/677 (61%), Positives = 519/677 (76%), Gaps = 24/677 (3%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV----------- 117
AYL +Q+G IQPFGC+LA++E TF +IAYSENA E+L ++ +VP++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G V+ IG+D++T+FT SA AL+KA E+SL+NPI VH K + KPFYAIVHR+
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 178 LIIDFEPVKPY-----EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFE 232
+++D EPV+ + ++AAGA+QS KLA +AI+ LQSLP+G + LCDT++++V E
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISGLQSLPAGDIGLLCDTVVEDVRE 180
Query: 233 LTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVD 292
LTGYDRVM YKFHED+HGEV++EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 293 CRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN 352
CRA VKV+Q E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N E+EG
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 353 TLPQKRK----RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKN 408
+LWGLVVCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 409 ILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIV 468
ILRTQTLLCDML+RDAP+GIVT SP+IMDLVKCDGAAL Y W LGVTP + Q+ DI
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 469 SWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRW 528
WL EYH+DSTGLS DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E++W
Sbjct: 421 DWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKW 480
Query: 529 GGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGT 588
GGAKH PD+KDDGR+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID- 539
Query: 589 LDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAE 647
D +TK+ +H++L DLK++G+ EL V SEMVRLIETAT PILAVD +GL+NGWN K+AE
Sbjct: 540 -DSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 598
Query: 648 LTGLSVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPIT 706
LTGL V +A+GK + L+ + S +T+ +MLY AL+G+EE+N++ +++T G + I
Sbjct: 599 LTGLPVGEAMGKSLVHDLIFEESANTLDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIY 658
Query: 707 LIVNACASRDLHDNVVG 723
L+VNAC+SRD DN+VG
Sbjct: 659 LVVNACSSRDYTDNIVG 675
>gi|406685535|gb|AFS51208.1| phytochrome P, partial [Nageia wallichiana]
Length = 660
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/663 (61%), Positives = 515/663 (77%), Gaps = 11/663 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV-----GDHPVL 123
AYL +Q+G IQPFGC+LA++E FK+IAYS+NA E+L ++ +VP++ G VL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEEANFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 124 GIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 183
+G+D++T+FT SA AL+KA ++SL+NPI VH + S KPF AIVHR+ ++ID E
Sbjct: 61 TLGTDVRTLFTPSSARALEKAAMAPDISLMNPICVHSQYSRKPFNAIVHRIDVGMVIDLE 120
Query: 184 PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYK 243
P++ + M+ AGA+QS K A +AI+RLQSLP+G + LCDT++++V ELTGYDRVM YK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 244 FHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD 303
FHED+HGEVV+EI ++ LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A V V+Q
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVTVIQS 240
Query: 304 EKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWG 363
E+L L L GSTL APH CH QYM NM SIASLVMAVV+N +EEG T + +LWG
Sbjct: 241 EELRQPLCLVGSTLGAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGTSGRSSMKLWG 300
Query: 364 LVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRD 423
LVVCH+T+PR V FPLRYACEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+RD
Sbjct: 301 LVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRD 360
Query: 424 APLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSA 483
AP+GIVTQSP+I DLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 APIGIVTQSPSITDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLST 420
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRK 543
DSL DAGY GA LGD VCGMAA RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+
Sbjct: 421 DSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSNTAKEMKWGGAKHHPDDKDDGRR 480
Query: 544 MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCD 602
MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+ D TK+ +H++L D
Sbjct: 481 MHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID--DSGTKTMVHARLND 538
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LK +G+ EL +V +EMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK +
Sbjct: 539 LKYQGIDELSSVATEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 663 --TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
++EDS+ + V++MLY AL+G+EE+N++ ++T G++ + I L+VNAC+SRD +N
Sbjct: 599 HDVVLEDSA-ECVEKMLYRALRGEEEKNVEIRLRTFGTQKQKEAIYLVVNACSSRDYTEN 657
Query: 721 VVG 723
+VG
Sbjct: 658 IVG 660
>gi|406685463|gb|AFS51172.1| phytochrome P, partial [Araucaria columnaris]
Length = 677
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/679 (60%), Positives = 519/679 (76%), Gaps = 26/679 (3%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV----------- 117
AYL +Q+G IQPFGC+LA++E TF +IAYSENA E+L ++ +VP++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G V+ IG+D++T+FT SA AL++A E+SL+NPI VH K + KPFYAIVHR+
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALERAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 178 LIIDFEPVKPY-----EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFE 232
+++D EPV+ + ++AAGA+QS KLA +AI+RLQSLP+G + LCDT++++V E
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 233 LTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVD 292
LTGYDRVM YKFHED+HGEV++EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 293 CRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN 352
CRA VKV+Q E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N E+EG
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 353 TLPQKRK------RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILE 406
+LWGLVVCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 407 KNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHD 466
K+ILRTQTLLCDML+RDAP+GIVT SP+IMD VKCDGAAL Y W LGVTP + Q+ D
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDPVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 467 IVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEV 526
I WL EYH+DSTGLS DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 527 RWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDV 586
+WGGAKH PD+KDDGR+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 587 GTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKI 645
D +TK+ +H++L DLK++G+ EL V SEMVRLIETAT PILAVD +GL+NGWN K+
Sbjct: 541 D--DSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKV 598
Query: 646 AELTGLSVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDP 704
AELTGL V +A+GK + L+ + S +TV +MLY AL+G+EE+N++ +++T G +
Sbjct: 599 AELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKA 658
Query: 705 ITLIVNACASRDLHDNVVG 723
I L+VNAC+SRD DN+VG
Sbjct: 659 IYLVVNACSSRDYTDNIVG 677
>gi|406685659|gb|AFS51270.1| phytochrome P, partial [Tsuga caroliniana]
Length = 656
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/660 (61%), Positives = 516/660 (78%), Gaps = 9/660 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P L I
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSM-EQPQPEALTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA +L++A E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAASAHSLERAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
+ + M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGYDRVM YKFH
Sbjct: 120 RTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM S+ASLVMAV++N ++E + + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGS-GRNSMKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+IL+TQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS S
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTGS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA +LGD VCGMA+ I+ KD +FWFRS TA E++WGGAKH PD+KDDGRKMH
Sbjct: 419 LADAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRKMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ + ++L DL+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVRARLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
++G+ E +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G +
Sbjct: 537 LQGIDERSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LV + S++ V++MLY AL+GQEE+N++ ++T G + + + L+VNAC+SRD +N+VG
Sbjct: 597 LVFEESVERVEKMLYNALRGQEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTENIVG 656
>gi|406685481|gb|AFS51181.1| phytochrome P, partial [Araucaria schmidii]
Length = 677
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/679 (60%), Positives = 518/679 (76%), Gaps = 26/679 (3%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV----------- 117
AYL +Q+G IQPFGC+LA++E TF +IAYSENA E+L ++ +VP++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G V+ IG+D++T+FT SA AL+KA E+SL+NPI VH K + KPFYAIVHR+
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 178 LIIDFEPVKPY-----EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFE 232
+++D EPV+ + ++AAGA+QS KLA +AI+RLQSLP+G + LCDT++++V E
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 233 LTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVD 292
LTGYDRVM YKFHED+HGEV++EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 293 CRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN 352
CRA VKV+Q E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N E+EG
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 353 TLPQKRK------RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILE 406
+LWGLVVCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 407 KNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHD 466
K+ILRTQTLLCDML+RDAP+GIVT SP+IMDLVKCDGAAL Y W LGVTP + Q+ D
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 467 IVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEV 526
I WL EYH+DSTGLS DSL DAGY A +LGD VCGMAA RI+ KD +FWFRS TA E+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 527 RWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDV 586
+WGGAKH PD+KDDGR+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 587 GTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKI 645
D +TK+ +H++L DLK++G+ EL V SEMVRLIETAT PILAVD +GL+NGWN K+
Sbjct: 541 D--DSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKV 598
Query: 646 AELTGLSVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDP 704
AELTGL V +A+GK + L+ + S +T+ +MLY AL+G+EE+N++ ++T G +
Sbjct: 599 AELTGLPVGEAMGKSLVHDLIFEESANTLDKMLYHALRGEEEKNVEINLRTFGPQKQKKA 658
Query: 705 ITLIVNACASRDLHDNVVG 723
I L+VNAC+SRD DN+VG
Sbjct: 659 IYLVVNACSSRDYTDNIVG 677
>gi|406685627|gb|AFS51254.1| phytochrome P, partial [Abies firma]
Length = 656
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/663 (61%), Positives = 518/663 (78%), Gaps = 15/663 (2%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G +QPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P VL I
Sbjct: 1 AYLSRIQRGGRVQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVPSM-EQPQQEVLTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA++L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
+ + M+AAGA+QS KLA +AI+RLQSLPSG + LCDT+++ V ELTGYDRVM YKFH
Sbjct: 120 RIGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HG I +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGGSCRGIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM SIASLVMAV++N ++E T + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGT-GRNSLKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+IL+TQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY A +LGD VCGMA+ RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPSAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L DL+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHSRLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTL 664
++G+ EL +V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G ++L
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG---MSL 593
Query: 665 VED----SSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
V+D S++ V++MLY AL+G+EE N++ ++T G + + + L+VNAC+SRD +N
Sbjct: 594 VQDLLFEESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTEN 653
Query: 721 VVG 723
+VG
Sbjct: 654 IVG 656
>gi|297524046|gb|ADI45741.1| phytochrome A [Cycladenia humilis]
Length = 476
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/474 (84%), Positives = 441/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAI RLQSLPSGSMERLCDT++QEVFELTGYDRVMAYKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAIARLQSLPSGSMERLCDTIVQEVFELTGYDRVMAYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQA RFLFMKNKVRMI DCRA+HV+VLQDE L FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAVRFLFMKNKVRMICDCRAKHVRVLQDEMLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENM+SIASLVMAVV+ND ++EG+++ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMDSIASLVMAVVINDGDDEGESSESAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G TP+DFQL+D+VSWL EYHMDSTGLS DSL+DAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRVGRTPSDFQLNDLVSWLIEYHMDSTGLSTDSLHDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD +CGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDD RKMHPRSSF+AFL+
Sbjct: 301 ALGDAICGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDARKMHPRSSFRAFLD 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+ L DL+I+G+KELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVDASETETKTIHNILNDLRIDGLKELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD DGLVNGWNTKIAELTGLSVD+AIGKH L LVED S
Sbjct: 421 AEMVRLIETASVPILAVDTDGLVNGWNTKIAELTGLSVDEAIGKHLLELVEDLS 474
>gi|406685467|gb|AFS51174.1| phytochrome P, partial [Araucaria humboldtensis]
Length = 677
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/679 (60%), Positives = 518/679 (76%), Gaps = 26/679 (3%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV----------- 117
AYL +Q+G IQPFGC+LA++E TF +IAYSENA E+L ++ +VP++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G V+ IG+D++T+FT SA AL+KA E+SL+NPI VH K + KPFYAIVHR+
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 178 LIIDFEPVKPY-----EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFE 232
+++D EPV+ + ++AAGA+QS KLA +AI+RLQSLP+G + LCDT++++V E
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 233 LTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVD 292
LTGYDRVM YKFHED+HGEV++EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 293 CRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN 352
CRA VKV+Q E+L L L GSTLRAPH CH QYM NM SIASLVMAVV+N E+EG
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 353 TLPQKRK------RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILE 406
+LWGLVVCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 407 KNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHD 466
K+ILRTQTLLCDML+RDAP+GIVT SP+IMDLVKCDGAAL Y W LGVTP + Q+ D
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 467 IVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEV 526
I WL EYH+DSTGL DSL DAGY GA +LGD VCGMAA RI+ KD +FWFRS TA E+
Sbjct: 421 IADWLLEYHVDSTGLGTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 527 RWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDV 586
+WGGAKH PD+KDDGR+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 587 GTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKI 645
D +TK+ +H++L DLK++G+ EL V SEMVRLIETAT PILAVD +GL+NGWN K+
Sbjct: 541 D--DSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKV 598
Query: 646 AELTGLSVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDP 704
AELTGL V +A+GK + L+ + S +TV +MLY AL+G+EE+N++ +++T G +
Sbjct: 599 AELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKA 658
Query: 705 ITLIVNACASRDLHDNVVG 723
I L+VNAC SRD +N+VG
Sbjct: 659 IYLVVNACFSRDYTENIVG 677
>gi|297524117|gb|ADI45775.1| phytochrome A [Parsonsia eucalyptophylla]
Length = 467
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/466 (86%), Positives = 437/466 (93%), Gaps = 3/466 (0%)
Query: 207 AITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLG 266
AITRLQSL SGSMERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV+SEITK GLEPYLG
Sbjct: 1 AITRLQSLSSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVISEITKPGLEPYLG 60
Query: 267 LHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQ 326
LHYPATDIPQAARFLFMKNKVRMI DC A+HVKVLQDEKL FDLTLCGSTLRAPHSCHLQ
Sbjct: 61 LHYPATDIPQAARFLFMKNKVRMICDCHAQHVKVLQDEKLSFDLTLCGSTLRAPHSCHLQ 120
Query: 327 YMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNTTPRFVPFPLRYAC 383
YMENMNSI+SLVMAVV+ND ++EG+ + LPQKRKRLWGLVVCHN+TPRFVPFPLRYAC
Sbjct: 121 YMENMNSISSLVMAVVINDGDDEGEGSNAALPQKRKRLWGLVVCHNSTPRFVPFPLRYAC 180
Query: 384 EFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDG 443
EFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNIMDLVKCDG
Sbjct: 181 EFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDG 240
Query: 444 AALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCG 503
AALLYKNK+ R+G TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GALALG VVCG
Sbjct: 241 AALLYKNKMHRMGTTPSDFQLNDIVSWLVEYHMDSTGLSTDSLYDAGFPGALALGGVVCG 300
Query: 504 MAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLP 563
MAAVRIS KD +FWFRS TA+EVRWGGAKHEP EKDDGRKMHPRSSFKAFLEVVK+RSLP
Sbjct: 301 MAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKSRSLP 360
Query: 564 WKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIE 623
WKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT+EMVRLIE
Sbjct: 361 WKDYEMDAIHSLQLILRNSFKEVNASETETKTIHNKLSDLRIDGLQELEAVTAEMVRLIE 420
Query: 624 TATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
TA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH LTLVED S
Sbjct: 421 TASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDLS 466
>gi|297524032|gb|ADI45734.1| phytochrome A [Apocynum androsaemifolium]
Length = 471
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/469 (85%), Positives = 436/469 (92%), Gaps = 3/469 (0%)
Query: 204 AAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEP 263
A KA TRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK GLEP
Sbjct: 1 AGKAXTRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITKPGLEP 60
Query: 264 YLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSC 323
YLGLHYPATDIPQAARFLFMKNKVRMI DC A+HV+VLQDEKL FDLTLCGSTLRAPH+C
Sbjct: 61 YLGLHYPATDIPQAARFLFMKNKVRMICDCCAKHVRVLQDEKLSFDLTLCGSTLRAPHTC 120
Query: 324 HLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFVPFPLR 380
HLQYMENMNSIASLVMAVV+ND ++EG D+ PQKRKRLWGLVVCHNTTPRFVPFPLR
Sbjct: 121 HLQYMENMNSIASLVMAVVINDGDDEGESSDSAQPQKRKRLWGLVVCHNTTPRFVPFPLR 180
Query: 381 YACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVK 440
YACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNIMDLVK
Sbjct: 181 YACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNIMDLVK 240
Query: 441 CDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDV 500
CDGAALLYKNKI R+G+TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GALALGD
Sbjct: 241 CDGAALLYKNKIHRMGITPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGALALGDT 300
Query: 501 VCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTR 560
VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEPDE+DDGRKMHPRSSFKAFLEVVKTR
Sbjct: 301 VCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPDERDDGRKMHPRSSFKAFLEVVKTR 360
Query: 561 SLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVR 620
SLPWKDYEMD IHSLQLILRN+FK+ + +TK IH+KL DL+I+G++ELEAVT+EMVR
Sbjct: 361 SLPWKDYEMDGIHSLQLILRNSFKEFDAPESETKIIHNKLNDLRIDGLQELEAVTAEMVR 420
Query: 621 LIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
LIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH LTLVED S
Sbjct: 421 LIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDLS 469
>gi|406685667|gb|AFS51274.1| phytochrome P, partial [Tsuga sieboldii]
Length = 656
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/660 (61%), Positives = 516/660 (78%), Gaps = 9/660 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G IQPFGC+LA++E TF++IAYSENA E+L + +VPS+ + P L I
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSM-EQPQPEALTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA +L++A E+SL+NPI VHCK S KPFYAIVHR+ ++ID EP+
Sbjct: 60 GTDVRTLFTAASAHSLERAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDIEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
+ + M+AAGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGYDRVM YKFH
Sbjct: 120 RTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM S+ASLVMAV++N ++E + + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGS-GRNSMKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYA EFL Q F + +N EL+L Q+ EK+IL+TQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYAREFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY GA +LGD VCGMA+ I+ KD +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +H++L DL+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIN--DSGTKTMVHARLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
++G+ EL +V SEMVRLIETAT PI AVD +GLVNGWN K+AELTGL V +A+G +
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPIXAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQD 596
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
LV + S++ V++MLY AL+G+EE+N++ ++T G + + + L+VNAC+SRD DN+VG
Sbjct: 597 LVFEESVERVEKMLYNALRGEEEKNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTDNIVG 656
>gi|406685521|gb|AFS51201.1| phytochrome P, partial [Lepidothamnus fonkii]
Length = 661
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/663 (61%), Positives = 515/663 (77%), Gaps = 10/663 (1%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV------GDHPV 122
AYL +Q+G IQPFGC+LA+++ FK+IAYSENA E+L ++ +VP++ G V
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEDTNFKIIAYSENALEMLDIMPQSVPNMDLGKSGGGGAV 60
Query: 123 LGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182
L IG+D++T+FT SA AL+KA E+SL+NPI +H + +GKPFYAIVH + ++ID
Sbjct: 61 LTIGADVRTLFTPASARALEKASMAQEISLMNPIWMHSQYTGKPFYAIVHGIDVGIVIDL 120
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EP K + M+AAGA+QS KL+ +A +RLQSLP+G + LCDT++++V ELTGYDRVM Y
Sbjct: 121 EPAKTGDAAMSAAGAVQSQKLSVRASSRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFHED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 240
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLW 362
++L L L GSTLRAPH CH QYM NM SIASLVMAVV+N +EEG + +LW
Sbjct: 241 SQELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGPSGRSSMKLW 300
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVVCH+T+PR VPFPLRY CEFL Q F + +N EL+L Q+ EK+ILRTQTLLCDML+R
Sbjct: 301 GLVVCHHTSPRAVPFPLRYGCEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLR 360
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
DAP+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL EYH DSTGLS
Sbjct: 361 DAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLS 420
Query: 483 ADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
DSL DAGY GA +LGD VCGMAA RI+ D +FWFRS TA E++WGGAKH PD+KDD R
Sbjct: 421 TDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPDDKDDVR 480
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLC 601
+MHPRSSFKAFLEVVK RSLP ++ EMDAIHSLQLILR +F+D+ D +TK+ +H++L
Sbjct: 481 RMHPRSSFKAFLEVVKRRSLPRENVEMDAIHSLQLILRGSFQDIE--DSNTKTMVHARLN 538
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
DLK++G+ EL +V +EMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+GK
Sbjct: 539 DLKLQGIDELSSVATEMVRLIETATAPILAVDSEGLVNGWNAKVAELTGLPVGEAMGKSL 598
Query: 662 L-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ LV + S + V++ML A++G+EE+NI+ +++T G + + I L+VNAC+SRD DN
Sbjct: 599 VHDLVCEESAECVEKMLNRAVRGEEEKNIEIKLRTFGPQKQKEVIYLVVNACSSRDYTDN 658
Query: 721 VVG 723
+VG
Sbjct: 659 IVG 661
>gi|297524109|gb|ADI45771.1| phytochrome A [Oncinotis tenuiloba]
Length = 476
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/474 (85%), Positives = 440/474 (92%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYK AA AITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFH+DDHGEV+SEITK
Sbjct: 1 QSYKXAAXAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL---PQKRKRLWGLVVCHNTTPRFV 375
APH+CHLQYMENMNSIASLVMAVV+ND ++ GD + PQKRKRLWGLVVCHN+TPRFV
Sbjct: 121 APHTCHLQYMENMNSIASLVMAVVINDGDDVGDGSDSAQPQKRKRLWGLVVCHNSTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFL QVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLTQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G+TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRMGITPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHE EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHESGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVEASESETKTIHNKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA VPILAVDVDGLVNGWNTKIAEL GL VD+AIGKH LTLVEDSS
Sbjct: 421 AEMVRLIETALVPILAVDVDGLVNGWNTKIAELAGLPVDEAIGKHLLTLVEDSS 474
>gi|297524127|gb|ADI45780.1| phytochrome A [Phyllanthera grayi]
Length = 476
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/474 (86%), Positives = 442/474 (93%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL---PQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMA+V+ND ++EGD++ PQK KRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAIVINDGDDEGDSSDSAQPQKTKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+Q+PNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQNPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLV CDGAALLYKNK+ R+G P+D QL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVNCDGAALLYKNKMHRIGTNPSDSQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+++RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAADIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TKSIH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVEAPEFETKSIHTKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPI AVDVDGLVNGWNTKIAELTGL VD+AIGKH LTLVEDSS
Sbjct: 421 AEMVRLIETASVPIFAVDVDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVEDSS 474
>gi|380749536|gb|AFE48629.1| phytochrome A, partial [Monotropa uniflora]
Length = 477
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/477 (84%), Positives = 440/477 (92%), Gaps = 7/477 (1%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
RSD+VTTAYLH IQKGKLIQPFGCLLALDEKTFKVIAYSENAPE+LTMV+HAVPSVGDHP
Sbjct: 1 RSDKVTTAYLHQIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHP 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
+LGIG+++++IFT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID
Sbjct: 61 LLGIGTEVRSIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVP+TAAGALQSYKLAAKAITRLQSLPSG+M LCD M+QEVFELTGYDRVM
Sbjct: 121 FEPVKPYEVPLTAAGALQSYKLAAKAITRLQSLPSGNMRILCDAMVQEVFELTGYDRVMV 180
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEV SE+TK GLEPYLGLHYPATDIPQAARFLFMKNK+RMI DCRA+ VKV+
Sbjct: 181 YKFHDDDHGEVFSELTKPGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKQVKVI 240
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLP--- 355
QD+KLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VVVN +E + G +++P
Sbjct: 241 QDDKLPTDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEGDGGGSSVPSNQ 300
Query: 356 -QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
QK KRLWGL+VCHNTTPRFVPFPLRYACEFLAQVF IHVNKELELE QILEKNILRTQT
Sbjct: 301 QQKIKRLWGLLVCHNTTPRFVPFPLRYACEFLAQVFTIHVNKELELENQILEKNILRTQT 360
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPN+MDLVKCDGA LLYK+K +R+G TP DFQL DIV WLSEY
Sbjct: 361 LLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKDKTYRMGATPTDFQLRDIVYWLSEY 420
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
H DS GLS DSLYDAGY GALALGD VCGMAAV+I+ DM+FWF+SQTA+E+RWGGA
Sbjct: 421 HTDSRGLSTDSLYDAGYPGALALGDGVCGMAAVKITSNDMLFWFKSQTAAEIRWGGA 477
>gi|406685625|gb|AFS51253.1| phytochrome P, partial [Abies concolor]
Length = 656
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/663 (61%), Positives = 519/663 (78%), Gaps = 15/663 (2%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP---VLGI 125
AYL IQ+G +QPFGC+ A++E TF++IAYSENA E+L + +VPS+ + P VL I
Sbjct: 1 AYLSRIQRGGRVQPFGCVPAVEETTFRIIAYSENALEMLDLAPQSVPSM-EQPQQEVLTI 59
Query: 126 GSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 185
G+D++T+FTA SA++L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++IDFEP+
Sbjct: 60 GTDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPL 119
Query: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFH 245
+ + M+AAGA+QS KLA +AI+RLQSLPSG + LCDT+++ V ELTGYDRVM YKFH
Sbjct: 120 RIGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFH 179
Query: 246 EDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEK 305
ED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RF FM+N+VRMI DC A VKV+Q E+
Sbjct: 180 EDEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFSFMQNRVRMICDCMATPVKVIQSEE 239
Query: 306 LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLV 365
L L L GSTLRAPH CH QYM NM SIASLVMAV++N ++E T + +LWGLV
Sbjct: 240 LMQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGT-GRNSLKLWGLV 298
Query: 366 VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAP 425
VCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+IL+TQTLLCDML+RDAP
Sbjct: 299 VCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAP 358
Query: 426 LGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADS 485
+GIVTQSP+IMDLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DS
Sbjct: 359 IGIVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDS 418
Query: 486 LYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMH 545
L DAGY A +LGD VCGMA+ RI+ KD +FWFRS TA E++WGGAKH PD+KDDGR+MH
Sbjct: 419 LADAGYPSAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMH 478
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLK 604
PRSSFKAFLEVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L DL+
Sbjct: 479 PRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDID--DSGTKTMVHSRLNDLR 536
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTL 664
++G+ EL +V SEMVRLIETAT PILAVD +GLVNG K+AELTGL V +A+G ++L
Sbjct: 537 LQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGMECKVAELTGLPVGEAMG---MSL 593
Query: 665 VED----SSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
V+D S++ V++MLY AL+G+EE N++ ++T G + + + L+VNAC+SRD +N
Sbjct: 594 VQDLLFEESVERVEKMLYNALRGEEENNVEMMLRTFGPQKQKEAVFLVVNACSSRDFTEN 653
Query: 721 VVG 723
+VG
Sbjct: 654 IVG 656
>gi|297524036|gb|ADI45736.1| phytochrome A [Baissea multiflora]
Length = 472
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/472 (86%), Positives = 441/472 (93%), Gaps = 3/472 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFH+DDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL---PQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNS ASLVMAVV+ND ++EGD + PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSTASLVMAVVINDGDDEGDGSDSAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFL QVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLTQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNKI R+G+TP+DFQ++DIVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKIHRIGITPSDFQVNDIVSWLIEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TASE+RWGGAKHE EKDDGRKMHPRSSFKAFL+
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTASEIRWGGAKHELGEKDDGRKMHPRSSFKAFLQ 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVEASESETKTIHNKLTDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVED 667
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD AIGKH LTLVED
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDDAIGKHLLTLVED 472
>gi|297524076|gb|ADI45756.1| phytochrome A [Holarrhena curtisii]
Length = 476
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/476 (84%), Positives = 439/476 (92%), Gaps = 3/476 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCCAKHVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV ND ++EGD++ PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVTNDGDDEGDSSESAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGA+LLYKNK+ R+G P+D QL+DIVSWL EYH+DSTGLS DSLY AG+ GAL
Sbjct: 241 MDLVKCDGASLLYKNKVHRIGSAPSDIQLNDIVSWLIEYHVDSTGLSTDSLYGAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFL
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLG 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+IEG++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVEASESETKTIHTKLNDLRIEGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSID 671
+EMVRLIETA VPILAVD+DGLVNGWN+KIAELT L VD+AIGKH L+LVED S +
Sbjct: 421 AEMVRLIETALVPILAVDIDGLVNGWNSKIAELTCLPVDEAIGKHLLSLVEDLSAE 476
>gi|406685469|gb|AFS51175.1| phytochrome P, partial [Araucaria hunsteinii]
Length = 675
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/677 (61%), Positives = 516/677 (76%), Gaps = 24/677 (3%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVP--------SVGDH 120
AYL +Q+G IQPFGC+LA++E +F+++AYSENA E+L + +VP ++G H
Sbjct: 1 AYLTRMQRGGTIQPFGCMLAVEETSFQIVAYSENAVEMLDLSPQSVPNMDMDRDEAMGSH 60
Query: 121 P---VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
V+ IG+D++ +FT SA AL+KA E+S++NPI VH K + KPFYAIVHR+
Sbjct: 61 GGGRVITIGTDVRNLFTPSSARALEKAAMAQEISMMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 178 LIIDFEPVKPY-----EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFE 232
++ID EPV+ + ++AAGA+QS KLA +AI+RLQSLP+G + LCDT++++V E
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRE 180
Query: 233 LTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVD 292
LTGYDRVM YKFHED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 293 CRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN 352
CRA VKV+Q +L L L GSTLRAPH CH QYM NM SIASLVMAVV+N E+EG
Sbjct: 241 CRAAPVKVVQAGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 353 TLPQKRK----RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKN 408
+LWGLVVCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 409 ILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIV 468
ILRTQTLLCDML+RDAP+GIVT SP+IMDLVKCDGAAL Y W LGVTP + Q+ DI
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 469 SWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRW 528
WL EYH DSTGLS DSL DAGY GA +LGD VCGMA RI+ KD +FWFRS TA E++W
Sbjct: 421 DWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEMKW 480
Query: 529 GGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGT 588
GGAKH PD+KDDGR+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID- 539
Query: 589 LDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAE 647
D +TK+ +H++L DLK++G+ EL V SEMVRLIETAT PILAVD +GL+NGWN K+AE
Sbjct: 540 -DSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 598
Query: 648 LTGLSVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPIT 706
LTGL V +A+GK L+ D S +TV +MLY AL+G+EE+N++ +++T G + I
Sbjct: 599 LTGLPVGEAMGKSLAHDLIFDESANTVDKMLYHALRGEEEKNVEIKLRTFGPQKQKKAIY 658
Query: 707 LIVNACASRDLHDNVVG 723
L+VNAC+SRD DN+VG
Sbjct: 659 LVVNACSSRDYTDNIVG 675
>gi|380749514|gb|AFE48618.1| phytochrome A, partial [Allotropa virgata]
Length = 477
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/477 (84%), Positives = 437/477 (91%), Gaps = 7/477 (1%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
RSD++TTAYLH IQKGKLIQPFGCLLALD KTFKVIAYSENAPE+LT+V+HAVPSVGDHP
Sbjct: 1 RSDKITTAYLHQIQKGKLIQPFGCLLALDAKTFKVIAYSENAPEMLTLVSHAVPSVGDHP 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VLGIG+D++ IFT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID
Sbjct: 61 VLGIGTDVRAIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSL SGSM LCD M+QEVFELTGYDRVM
Sbjct: 121 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLQSGSMVILCDAMVQEVFELTGYDRVMV 180
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEV SE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKV+
Sbjct: 181 YKFHDDDHGEVFSELTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCNAKHVKVI 240
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLP--- 355
QD+KLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VVVN +E E G +++P
Sbjct: 241 QDDKLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEGEGGGSSVPSNQ 300
Query: 356 -QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
QK KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF IHVNKELELE QILEKNILRTQT
Sbjct: 301 QQKIKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFTIHVNKELELENQILEKNILRTQT 360
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPN+MDLVKCDGA LLYK+K +R+G TP D QL DIV WLSEY
Sbjct: 361 LLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKDKTYRMGATPTDSQLRDIVYWLSEY 420
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
H DSTGLS DSLYDAGY GALALGD VCGMAAVRI+ DM+FWFR+QTA+EV+WGGA
Sbjct: 421 HTDSTGLSTDSLYDAGYPGALALGDGVCGMAAVRITSNDMLFWFRAQTAAEVQWGGA 477
>gi|380749518|gb|AFE48620.1| phytochrome A, partial [Arctostaphylos uva-ursi]
Length = 477
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/477 (84%), Positives = 439/477 (92%), Gaps = 7/477 (1%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
RSD+VTTAYLH IQKGKLIQPFGCLLALDE F+VIAYSENAPE+LTMV+HAVPSVGDHP
Sbjct: 1 RSDKVTTAYLHQIQKGKLIQPFGCLLALDENNFRVIAYSENAPEMLTMVSHAVPSVGDHP 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VLGIG+D+ TIFT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVT SLIID
Sbjct: 61 VLGIGTDVGTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTSSLIID 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSG+M+RLCDTM+QEVFELTGYDRVMA
Sbjct: 121 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMKRLCDTMVQEVFELTGYDRVMA 180
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEV SE+TK GLEP+LGLHYPATD+PQAARFLFMKNKVRMI DC A++VKV+
Sbjct: 181 YKFHDDDHGEVFSELTKPGLEPFLGLHYPATDVPQAARFLFMKNKVRMICDCNAKNVKVI 240
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN-------TL 354
QD+KLP DLTLCGSTLRAPHSCH+QYMENMNSIASLVM+VVVN+ +EEG+ +
Sbjct: 241 QDDKLPIDLTLCGSTLRAPHSCHVQYMENMNSIASLVMSVVVNEGDEEGEGGESSDPASQ 300
Query: 355 PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
QK KRLWGLVVCHNTTPRFVPFPLRYACEF AQVFAIHVNKELELE QILEK+ILRTQT
Sbjct: 301 QQKTKRLWGLVVCHNTTPRFVPFPLRYACEFFAQVFAIHVNKELELENQILEKHILRTQT 360
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV++SPN+ DLVKCDGA LLYK+KI+R+G TP DFQL DIVSWLSEY
Sbjct: 361 LLCDMLMRDAPLGIVSESPNVTDLVKCDGAVLLYKDKIYRMGATPTDFQLRDIVSWLSEY 420
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
H DSTGLS DSLYDAGY GALALGD VCGMA VRI+ DM+FWFR+ TA+E+RWGGA
Sbjct: 421 HTDSTGLSTDSLYDAGYPGALALGDEVCGMAVVRITSDDMLFWFRAHTAAEIRWGGA 477
>gi|380749542|gb|AFE48632.1| phytochrome A, partial [Pterospora andromedea]
Length = 471
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/469 (84%), Positives = 437/469 (93%), Gaps = 1/469 (0%)
Query: 63 SDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPV 122
S++VTTAYLH IQKGK+IQPFGCLLALD KT KVIAYS+NAPE+LTMV+HAVPSVGDHP+
Sbjct: 2 SNKVTTAYLHQIQKGKMIQPFGCLLALDGKTCKVIAYSQNAPEMLTMVSHAVPSVGDHPI 61
Query: 123 LGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182
L IG+D+ T+FT PSA+ALQKALG GEVSLLNPILVHCKTSGKPFYAI+HRVTGSLIIDF
Sbjct: 62 LCIGTDVGTLFTNPSATALQKALGLGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDF 121
Query: 183 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAY 242
EPVKPYEVPMTAAGALQSYKLAAKAI+RLQSLPSGSM+RLCDTM++EVFELTGYDRVMAY
Sbjct: 122 EPVKPYEVPMTAAGALQSYKLAAKAISRLQSLPSGSMKRLCDTMVKEVFELTGYDRVMAY 181
Query: 243 KFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQ 302
KFH+DDHGEV +E+TK GLEPY GLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKV+Q
Sbjct: 182 KFHDDDHGEVFAEVTKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 241
Query: 303 DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP-QKRKRL 361
D K+ FDLTLCGSTLRAPH CHLQYMENMNSIASLVMAVVVN+ +EEG+++ P Q RKR+
Sbjct: 242 DYKVSFDLTLCGSTLRAPHGCHLQYMENMNSIASLVMAVVVNEGDEEGESSDPAQNRKRI 301
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGLVVCH+TTPRFVPFPLRYACEFLAQVFAIHV KELELE QILEKNILRTQTLLCDMLM
Sbjct: 302 WGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVTKELELENQILEKNILRTQTLLCDMLM 361
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RD PLGIV+Q+PN+MDLVKCDGAALLYKNKI+++GV P DFQ+ DIVSWL E H DSTGL
Sbjct: 362 RDVPLGIVSQNPNVMDLVKCDGAALLYKNKIYKMGVNPTDFQIRDIVSWLVECHTDSTGL 421
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGG 530
S DSLYDAG+ GALALGDVVCGMA+VRI+ DM+FWFRS +A+E+RWGG
Sbjct: 422 STDSLYDAGFPGALALGDVVCGMASVRITSNDMLFWFRSHSAAEIRWGG 470
>gi|297524105|gb|ADI45769.1| phytochrome A [Neobracea valenzuelana]
Length = 476
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/474 (84%), Positives = 438/474 (92%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKV+Q+EKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCSAKHVKVVQEEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVND---EEEEGDNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND EE+ D+ QKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEEDISDSAQLQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKEL LE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELXLENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVK DGA LLYKNKI R+G+TP D QL+DIVSWL EYH+DSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKSDGAVLLYKNKIHRMGLTPTDVQLNDIVSWLIEYHVDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS +D +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSF+AFLE
Sbjct: 301 ALGDAVCGMAAVRISDEDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFRAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVEASESETKTIHTKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWN+KIAELTGL VD+AIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNSKIAELTGLPVDEAIGKHLLTLVEDLS 474
>gi|297524155|gb|ADI45794.1| phytochrome A [Secondatia densiflora]
Length = 465
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/465 (86%), Positives = 437/465 (93%), Gaps = 3/465 (0%)
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAITR QSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK GL
Sbjct: 1 KLAAKAITRXQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITKPGL 60
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA++VKVLQDEKL FDLTLCGSTLRAPH
Sbjct: 61 EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKYVKVLQDEKLSFDLTLCGSTLRAPH 120
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNTTPRFVPFP 378
SCHLQYMENMNSIASLVMAVV+ND ++EG+ T PQKRKRLWGLVVCHNTTPRFVPFP
Sbjct: 121 SCHLQYMENMNSIASLVMAVVINDGDDEGEGTDTAQPQKRKRLWGLVVCHNTTPRFVPFP 180
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
LRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+Q+PNIMDL
Sbjct: 181 LRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQNPNIMDL 240
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
VKCDGAALLYK+KI +LG+TP+DFQL+DIVSWL EYHMDSTGLS DSLYDAG+ GAL+LG
Sbjct: 241 VKCDGAALLYKDKIRQLGITPSDFQLNDIVSWLIEYHMDSTGLSTDSLYDAGFPGALSLG 300
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVK 558
D VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLEVVK
Sbjct: 301 DAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVK 360
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEM 618
TRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT+EM
Sbjct: 361 TRSLPWKDYEMDAIHSLQLILRNSFKEVDASESETKTIHNKLNDLRIDGLQELEAVTAEM 420
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT 663
VRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGK+ LT
Sbjct: 421 VRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKNLLT 465
>gi|380749530|gb|AFE48626.1| phytochrome A, partial [Monotropa hypopitys]
Length = 477
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/477 (84%), Positives = 434/477 (90%), Gaps = 7/477 (1%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
RSD+VTTAYLH IQKGKLIQPFGCLLALDE TFKVIAYSENAPE+LTMV+HAVPSVGDH
Sbjct: 1 RSDKVTTAYLHQIQKGKLIQPFGCLLALDEITFKVIAYSENAPEMLTMVSHAVPSVGDHS 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VLGIG+D++ IFT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVT SLIID
Sbjct: 61 VLGIGTDVRAIFTNPSATALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTSSLIID 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKPYEVPMTAAGALQSYKLAAKAIT LQSL SGSM LCD M+QEVFELTGYDRVM
Sbjct: 121 FEPVKPYEVPMTAAGALQSYKLAAKAITHLQSLSSGSMSILCDAMVQEVFELTGYDRVMV 180
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEV SE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKV+
Sbjct: 181 YKFHDDDHGEVFSELTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVI 240
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLP--- 355
QD+KLP DLTLCGS LRAPHSCHLQYMENMNS+ASLVM+VVVN +E E G +++P
Sbjct: 241 QDDKLPIDLTLCGSALRAPHSCHLQYMENMNSVASLVMSVVVNEEDEEGEGGGSSIPSNQ 300
Query: 356 -QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQT 414
QK KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVF IHVNKELELE QILEKNILRTQT
Sbjct: 301 QQKIKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFTIHVNKELELENQILEKNILRTQT 360
Query: 415 LLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEY 474
LLCDMLMRDAPLGIV+QSPN+MDLVKCDGA LLYK+K +R+G TP DFQL DIV WLSEY
Sbjct: 361 LLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKDKTYRMGATPTDFQLRDIVYWLSEY 420
Query: 475 HMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
H DSTGLS DSLYDAGY GALALGD VCGMAAVRI+ DM+FWFR+QTA+E+RWGGA
Sbjct: 421 HADSTGLSTDSLYDAGYPGALALGDGVCGMAAVRITSNDMLFWFRAQTAAEIRWGGA 477
>gi|406685455|gb|AFS51168.1| phytochrome P, partial [Araucaria araucana]
Length = 675
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/677 (61%), Positives = 515/677 (76%), Gaps = 24/677 (3%)
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVP--------SVGDH 120
AYL +Q+G IQPFGC LA++E +F ++AYSENA ELL + +VP ++G H
Sbjct: 1 AYLTRMQRGGTIQPFGCTLAVEETSFLIVAYSENAVELLDLSPQSVPNMDMDRDEAMGSH 60
Query: 121 P---VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
V+ IG+D++T+FT SA AL+KA E+S++NPI VH K + KPFYAIVHR+
Sbjct: 61 GGGRVITIGTDVRTLFTPSSARALEKAAMAQEISMMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 178 LIIDFEPVKPY-----EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFE 232
++ID EPV+ + ++AAGA+QS KLA +AI+RLQSLP+G + LCDT++++V E
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRE 180
Query: 233 LTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVD 292
LTGYDRVM YKFHED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI D
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 293 CRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN 352
CRA VKV+Q +L L L GSTLRAPH CH QYM NM SIASLVMAVV+N E+EG
Sbjct: 241 CRAAPVKVVQAGQLQQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 353 TLPQKRK----RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKN 408
+LWGLVVCH+T+PR VPFPLRYACEFL Q F + +N EL+L Q+ EK+
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 409 ILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIV 468
ILRTQTLLCDML+RDAP+GIVT SP+IMDLVKCDGAAL Y W LGVTP + Q+ DI
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 469 SWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRW 528
WL EYH DSTGLS DSL DAGY GA +LGD VCGMA RI+ KD +FWFRS TA E++W
Sbjct: 421 DWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEMKW 480
Query: 529 GGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGT 588
GGAKH PD+KDDGR+MHPRSSFKAFLEVVK RSLPW++ EMDAIHSLQLILR +F+D+
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDID- 539
Query: 589 LDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAE 647
D +TK+ +H++L DLK++G+ EL V SEMVRLIETAT PILAVD +GL+NGWN K+AE
Sbjct: 540 -DSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 598
Query: 648 LTGLSVDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPIT 706
LTGL V +A+GK + L+ D S +TV +ML AL+G+EE+N++ +++T G + I
Sbjct: 599 LTGLPVGEAMGKSLVHDLIFDESANTVDKMLCHALRGEEEKNVEIKLRTFGPQKQKKAIY 658
Query: 707 LIVNACASRDLHDNVVG 723
L+VNAC+SRD DN+VG
Sbjct: 659 LVVNACSSRDYTDNIVG 675
>gi|297524103|gb|ADI45768.1| phytochrome A [Neobracea valenzuelana]
Length = 476
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/474 (84%), Positives = 438/474 (92%), Gaps = 3/474 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK
Sbjct: 1 QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKV+Q+EKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCSAKHVKVVQEEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVND---EEEEGDNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND EE+ D+ QKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEEDISDSAQLQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVK DGA LLYKNKI R+G+TP D QL+DIVSWL E H+DSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKSDGAVLLYKNKIHRMGLTPTDVQLNDIVSWLIECHVDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS +D +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSF+AFLE
Sbjct: 301 ALGDAVCGMAAVRISDEDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFRAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVEASESETKTIHTKLNDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSS 669
+EMVRLIETA+VPILAVD+DGLVNGWN+KIAELTGL VD+AIGKH LTLVED S
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNSKIAELTGLPVDEAIGKHLLTLVEDLS 474
>gi|380749534|gb|AFE48628.1| phytochrome A, partial [Moneses uniflora]
Length = 475
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/475 (84%), Positives = 434/475 (91%), Gaps = 5/475 (1%)
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+SD+VTTAYLH IQKG LIQPFGCLLALDEKTFKVIAYS NAPE+LTMV+HAVPSVG+ P
Sbjct: 1 KSDKVTTAYLHQIQKGTLIQPFGCLLALDEKTFKVIAYSANAPEMLTMVSHAVPSVGEQP 60
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
VLGIG+D++TIFT PSA+ALQKA+G+GEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID
Sbjct: 61 VLGIGTDVRTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 120
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
FEPVKP+EV MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMA
Sbjct: 121 FEPVKPFEVSMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 180
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFH+DDHGEV SE TK G EPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKV+
Sbjct: 181 YKFHDDDHGEVFSEATKPGHEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVI 240
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLP-----Q 356
QD+KLP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VVVN+ +EEG+ Q
Sbjct: 241 QDDKLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEGEGGSSDPANQQ 300
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNT PRFVPFPLRYACEFL QVFAIHVNKELELE QILEKNI RTQTLL
Sbjct: 301 KRKRLWGLVVCHNTNPRFVPFPLRYACEFLTQVFAIHVNKELELENQILEKNIFRTQTLL 360
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPN+MDLVKCDGA LLYK+K++R+G TP DFQL DIVSWLSEYH
Sbjct: 361 CDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKHKVYRMGATPTDFQLCDIVSWLSEYHA 420
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
DSTGLS DSL DAGY GALALG VCGMAAVRI+ DM+FWFR+ TA+E+RW GA
Sbjct: 421 DSTGLSTDSLSDAGYPGALALGGEVCGMAAVRITSNDMLFWFRAHTAAEIRWSGA 475
>gi|13383456|gb|AAK20991.1| phytochrome A [Tetracentron sinense]
Length = 465
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/465 (87%), Positives = 435/465 (93%), Gaps = 3/465 (0%)
Query: 163 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 222
SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAI RLQSLPSGS+ERL
Sbjct: 1 SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSIERL 60
Query: 223 CDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLF 282
CDT++QEVFELTGYDR M YKFHEDDHGEVVSEITK GLEPYLGLHYPATDIPQAARFLF
Sbjct: 61 CDTVVQEVFELTGYDRAMVYKFHEDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLF 120
Query: 283 MKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 342
MKNKVRMI DCRA+HVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV
Sbjct: 121 MKNKVRMICDCRAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV 180
Query: 343 VNDEEEEGDNTLP---QKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELE 399
VN+E+EEG+++ QKRK+LWGL+VCH+TTPRFVPFPLRYACEFLAQVFAIHVNKELE
Sbjct: 181 VNEEDEEGESSSSEQSQKRKKLWGLLVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKELE 240
Query: 400 LEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTP 459
LE QILEKNILRTQTLLCDMLMRDAPLGIV+QSPNIMDLVKCDGA LLYKN+IW+LG TP
Sbjct: 241 LENQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAVLLYKNRIWQLGSTP 300
Query: 460 NDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFR 519
++F +HDI SWLSEYHMDSTGLS DSLYDAG+ GALALGD VCGMAAVRI+ KDM+FWFR
Sbjct: 301 SEFHIHDITSWLSEYHMDSTGLSTDSLYDAGFPGALALGDGVCGMAAVRITSKDMLFWFR 360
Query: 520 SQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 579
S TA+EVRWGGAKHEP EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL
Sbjct: 361 SHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 420
Query: 580 RNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVRLIET 624
RNAFKDV L+T +I ++L DL IEG +ELEAVT+EMVRL+ET
Sbjct: 421 RNAFKDVENEGLNTSTIRTQLNDLSIEGTEELEAVTNEMVRLMET 465
>gi|297524087|gb|ADI45760.1| phytochrome A [Isonema smeathmannii]
Length = 467
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/466 (85%), Positives = 434/466 (93%), Gaps = 3/466 (0%)
Query: 204 AAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEP 263
AAKA TR QSLPSGSMERLCDTM+QEVFELTGYDRVM YKFHEDDHGEV+SEITK GLEP
Sbjct: 2 AAKAXTRXQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHEDDHGEVISEITKPGLEP 61
Query: 264 YLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSC 323
YLGLHYPATDIPQAARFLFMKNKVRMI DC A+HVKVLQDEKL FDLTLCGSTLRAPHSC
Sbjct: 62 YLGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVLQDEKLSFDLTLCGSTLRAPHSC 121
Query: 324 HLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQKRKRLWGLVVCHNTTPRFVPFPLR 380
HLQYME+MNSIASLVMAVV+ND ++EGDN+ PQKRKRLWGLVVCHNTTPRFVPFPLR
Sbjct: 122 HLQYMESMNSIASLVMAVVINDGDDEGDNSDSAQPQKRKRLWGLVVCHNTTPRFVPFPLR 181
Query: 381 YACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVK 440
YACEFL QVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV+QSPNIMDL+K
Sbjct: 182 YACEFLVQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSQSPNIMDLLK 241
Query: 441 CDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDV 500
CDGAALLYKNKI R+G+TP+DFQ++DIVSWL EYHMDSTGLS DSLYDAG+ GAL LGD
Sbjct: 242 CDGAALLYKNKIHRIGLTPSDFQVNDIVSWLIEYHMDSTGLSTDSLYDAGFPGALDLGDA 301
Query: 501 VCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTR 560
+CGMAAVRIS KD +FWFRS TA+E+RWGGAKHE EKDDGRKMHPRSSFKAFLEVVK R
Sbjct: 302 ICGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEAGEKDDGRKMHPRSSFKAFLEVVKRR 361
Query: 561 SLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMVR 620
SLPWKDYEMDAIHSLQLILRN+FK+VG + +TK+IH+KL DL+I+G++ELEAVT+EMVR
Sbjct: 362 SLPWKDYEMDAIHSLQLILRNSFKEVGASESETKTIHTKLNDLRIDGLQELEAVTAEMVR 421
Query: 621 LIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVE 666
LIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGKH LTLVE
Sbjct: 422 LIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGKHLLTLVE 467
>gi|297524119|gb|ADI45776.1| phytochrome A [Peltastes isthmicus]
Length = 464
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/464 (85%), Positives = 433/464 (93%), Gaps = 3/464 (0%)
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAA AITRLQSLPSGSMERLCDTM+QEVFELTGYDRVMAYKFH+DDHGEV+SE+TK
Sbjct: 1 QSYKLAAXAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVTK 60
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DC A+ VKVLQDEKL FDLTLCGSTLR
Sbjct: 61 PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCHAKDVKVLQDEKLSFDLTLCGSTLR 120
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPRFV 375
APHSCHLQYMENMNSIASLVMAVV+ND ++EG D PQKRKRLWGLVVCHNTTPRFV
Sbjct: 121 APHSCHLQYMENMNSIASLVMAVVINDGDDEGESSDAAQPQKRKRLWGLVVCHNTTPRFV 180
Query: 376 PFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNI 435
PFPLRYACEFLAQVFAIHVNKELELE QI+EKNIL+TQTLLCDMLMRDAPLGIV++SPNI
Sbjct: 181 PFPLRYACEFLAQVFAIHVNKELELENQIVEKNILKTQTLLCDMLMRDAPLGIVSRSPNI 240
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLYKNK++ +G P+DFQL++IVSWL EYHMDSTGLS DSLYDAG+ GAL
Sbjct: 241 MDLVKCDGAALLYKNKMYPMGTIPSDFQLNEIVSWLVEYHMDSTGLSTDSLYDAGFPGAL 300
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD VCGMAAVRIS KD +FWFRS TA+E+RWGGAKHEP EKDDGRKMHPRSSFKAFLE
Sbjct: 301 ALGDAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 360
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKTRSLPWKDYEMDAIHSLQLILRN+FK+V + +TK+IH+KL DL+I+G++ELEAVT
Sbjct: 361 VVKTRSLPWKDYEMDAIHSLQLILRNSFKEVNASETETKTIHNKLSDLRIDGLQELEAVT 420
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGK 659
+EMVRLIETA+VPILAVD+DGLVNGWNTKIAELTGL VD+AIGK
Sbjct: 421 AEMVRLIETASVPILAVDIDGLVNGWNTKIAELTGLPVDEAIGK 464
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,648,677,260
Number of Sequences: 23463169
Number of extensions: 648902491
Number of successful extensions: 1593666
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5296
Number of HSP's successfully gapped in prelim test: 15027
Number of HSP's that attempted gapping in prelim test: 1558127
Number of HSP's gapped (non-prelim): 28493
length of query: 1052
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 899
effective length of database: 8,769,330,510
effective search space: 7883628128490
effective search space used: 7883628128490
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 83 (36.6 bits)