BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001564
(1052 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93673|PHYA_LATSA Phytochrome type A OS=Lathyrus sativus GN=PHYA PE=3 SV=1
Length = 1124
Score = 1845 bits (4780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 863/1054 (81%), Positives = 962/1054 (91%), Gaps = 3/1054 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS++RP+QSS+N+G+SR+SAR+IAQTT+DAKLHA FE SG+SFDYS+ VRVS + GDQQ
Sbjct: 1 MSTTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSWVRVSGSVDGDQQ 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRS++VTTAYL+HIQ+GK IQPFGCLLALDEKT KV+AYSENAPE+LTMV+HAVPSVGDH
Sbjct: 61 PRSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
P LGIG+DI+T+FTAPSASALQKALGF EVSLLNPILVHCKTSGKPFYAI+HRVTGSLII
Sbjct: 121 PALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSL SGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEV++EI K GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 241 AYKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQK 357
LQDEKLPFDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVND +E+GD+ LPQK
Sbjct: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQK 360
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
+KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELEYQILEKNILRTQTLLC
Sbjct: 361 KKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLC 420
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAAL Y+NK+W LG TP ++Q+ +I W+SEYH D
Sbjct: 421 DMLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTEYQIREIALWMSEYHTD 480
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAG+ GAL+L D VCGMAAVRI+ KD++FWFRS TA+E+RWGGAKHEP E
Sbjct: 481 STGLSTDSLLDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGE 540
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DDGRKMHPRSSFKAFLEVVK RS+PWKD+EMDAIHSLQLILRNA KD +DL+TK+I+
Sbjct: 541 QDDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKAIN 600
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
++L DLKIEGM+ELEAVTSEMVRLIETATVPILAVDVDG VNGWN KIAELTGL V +AI
Sbjct: 601 TRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGEAI 660
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS D VK+ML LALQG+EE+N+QFEIKTHG ++ PI+LIVNACASRDL
Sbjct: 661 GKHLLTLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVEFGPISLIVNACASRDL 720
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPA 777
+NVVGVCFVAQDIT QKTVMDKFTRIEGDYKAIVQNPN LIPPIFG+DEFGWCCEWN A
Sbjct: 721 RENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAA 780
Query: 778 MVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGF 837
M+KLTGWKREEV+DK+LL EVFGT M+CCRLKNQEAFVN GIVLNKAM+G + EKV FGF
Sbjct: 781 MIKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVAFGF 840
Query: 838 FARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALA 897
F+R GKY ECLL V+KK+D EG VTGVFCFLQLAS ELQQALH+QRLSEQTALKRLK L
Sbjct: 841 FSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLT 900
Query: 898 YTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYL 957
Y KRQIRNPL+GI+FS KM+EGT+L EQK++++TS+QCQRQL KILDDSDLD IIDGYL
Sbjct: 901 YMKRQIRNPLAGIVFSSKMLEGTDLETEQKQIVNTSSQCQRQLSKILDDSDLDGIIDGYL 960
Query: 958 DLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLS 1017
DLEM EFTL+EVLV S+SQVM +SN KGIRI N+ AE I E+LYGDS+RLQQVLADFL
Sbjct: 961 DLEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIAKESLYGDSLRLQQVLADFLL 1020
Query: 1018 ISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLEL 1051
ISIN PNGGQ++++SSLTK+QLG+SVHL LEL
Sbjct: 1021 ISINSTPNGGQVVIASSLTKEQLGKSVHLVNLEL 1054
>sp|P14712|PHYA_ARATH Phytochrome A OS=Arabidopsis thaliana GN=PHYA PE=1 SV=2
Length = 1122
Score = 1840 bits (4767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 876/1056 (82%), Positives = 965/1056 (91%), Gaps = 4/1056 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS SRP QSS + +SRHSAR+IAQTT+DAKLHADFE SG+SFDYS SVRV+ +Q
Sbjct: 1 MSGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRSD+VTT YLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENA ELLTM +HAVPSVG+H
Sbjct: 61 PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
PVLGIG+DI+++FTAPSASALQKALGFG+VSLLNPILVHC+TS KPFYAI+HRVTGS+II
Sbjct: 121 PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIII 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEVVSE+TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+H +V
Sbjct: 241 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD----NTLPQ 356
LQDEKL FDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVN+E+ EGD T PQ
Sbjct: 301 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQ 360
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+EL+ Q++EKNILRTQTLL
Sbjct: 361 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLL 420
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDMLMRDAPLGIV+QSPNIMDLVKCDGAALLYK+KIW+LG TP++F L +I SWL EYHM
Sbjct: 421 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHM 480
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL+DAG+ AL+LGD VCGMAAVRIS KDMIFWFRS TA EVRWGGAKH+PD
Sbjct: 481 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 540
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
++DD R+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD T D++TK I
Sbjct: 541 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVI 600
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+SKL DLKI+G++ELEAVTSEMVRLIETATVPILAVD DGLVNGWNTKIAELTGLSVD+A
Sbjct: 601 YSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 660
Query: 657 IGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRD 716
IGKHFLTLVEDSS++ VKRML AL+G EEQN+QFEIKTH S+ + PI+L+VNACASRD
Sbjct: 661 IGKHFLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRD 720
Query: 717 LHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNP 776
LH+NVVGVCFVA D+T QKTVMDKFTRIEGDYKAI+QNPNPLIPPIFG+DEFGWC EWNP
Sbjct: 721 LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP 780
Query: 777 AMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFG 836
AM KLTG KREEVIDK+LL EVFGT +CCRLKNQEAFVNLGIVLN A++ QDPEKV F
Sbjct: 781 AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFA 840
Query: 837 FFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKAL 896
FF R GKY ECLLCV+KKLDREG VTGVFCFLQLASHELQQALHVQRL+E+TA+KRLKAL
Sbjct: 841 FFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKAL 900
Query: 897 AYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGY 956
AY KRQIRNPLSGI+F+RKM+EGTELG EQ+R+L TSA CQ+QL KILDDSDL+SII+G
Sbjct: 901 AYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGC 960
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
LDLEM EFTLNEVL AS SQVMMKSN K +RI NET E++MS+TLYGDSIRLQQVLADF+
Sbjct: 961 LDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM 1020
Query: 1017 SISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+++NF P+GGQL VS+SL KDQLG+SVHLA LE+R
Sbjct: 1021 LMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIR 1056
>sp|P33530|PHYA1_TOBAC Phytochrome A1 OS=Nicotiana tabacum GN=PHYA1 PE=3 SV=1
Length = 1124
Score = 1820 bits (4714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 855/1042 (82%), Positives = 954/1042 (91%), Gaps = 3/1042 (0%)
Query: 14 GKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHH 73
+S+HSAR+IAQTTIDAKLHADFE SG SFDYS+SVRV+S AG +++P+SDRVTTAYL+
Sbjct: 14 ARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPKSDRVTTAYLNQ 73
Query: 74 IQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIF 133
IQKGK IQPFGCLLALDEKTFKVIA+SENAPE+LTMV+HAVPSVG+ P LGIG+DI+TIF
Sbjct: 74 IQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPALGIGTDIRTIF 133
Query: 134 TAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMT 193
T PSA+ALQKALGFGEVSLLNP+LVHCKTSGKP+YAIVHRVTGSLIIDFEPVKPYEVPMT
Sbjct: 134 TGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDFEPVKPYEVPMT 193
Query: 194 AAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVV 253
AAGALQSYKLAAKAITRLQ+LPSGSMERLCDTM+QEVFELTGYDRVM YKFH+DDHGEVV
Sbjct: 194 AAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVV 253
Query: 254 SEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLC 313
+EITK GL+PYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKV+QDEKLPFDLTLC
Sbjct: 254 AEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLC 313
Query: 314 GSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNT 370
GSTLRAPH CHLQYMENM+SIASLVMAVVVND +EEG D+T QKRKRLWGLVVCHNT
Sbjct: 314 GSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRKRLWGLVVCHNT 373
Query: 371 TPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVT 430
TPRFVPFPLRYACEFLAQVFAIHVNKELELE QILEKNILRTQTLLCDMLMR APLGIV+
Sbjct: 374 TPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRVAPLGIVS 433
Query: 431 QSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAG 490
QSPNIMDLVKCDGAALLYKNKI RLG+TP+DFQLHDIVSWLSEYH DSTGLS DSLYDAG
Sbjct: 434 QSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDSTGLSTDSLYDAG 493
Query: 491 YLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSF 550
+ GALALGDVVCGMAAVRIS K +FW+RS TA+EVRWGGAKHEP EKDDGRKMHPRSSF
Sbjct: 494 FPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSF 553
Query: 551 KAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKE 610
KAFLEVVKTRS+PWKDYEMDAIHSLQLILRNA KD +D +T IH+KL DLKI+G++E
Sbjct: 554 KAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTKLNDLKIDGLQE 613
Query: 611 LEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSI 670
LEAVT+EMVRLIETA+VPI AVDVDG +NGWNTKIAELTGL VD+AIG H LTLVEDSS+
Sbjct: 614 LEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGNHLLTLVEDSSV 673
Query: 671 DTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQD 730
DTV +ML LALQG+EE+N++FEIKTHG + PI+LIVNACASRD+ D+VVGVCF+AQD
Sbjct: 674 DTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGDSVVGVCFIAQD 733
Query: 731 ITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVI 790
IT QK +MDKFTRIEGDY+AI+QNP+PLIPPIFG+D+FGWC EWN AM KLTGW+R++VI
Sbjct: 734 ITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVI 793
Query: 791 DKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLC 850
DK+LL EVFGT ACCRLKNQEAFVN G+VLN AM+GQ+ K+ FGFFARNGKY ECLLC
Sbjct: 794 DKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFARNGKYVECLLC 853
Query: 851 VNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGI 910
V+K+LDREGAVTG+FCFLQLASHELQQALH+QRLSEQTALKRLK LAY +RQIRNPLSGI
Sbjct: 854 VSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYIRRQIRNPLSGI 913
Query: 911 IFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVL 970
IFSRKM+EGT LG EQK +L TS+QCQRQL+KILDD+DLDSIIDGYLDLEM+EF L+EVL
Sbjct: 914 IFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYLDLEMLEFKLHEVL 973
Query: 971 VASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLM 1030
VASISQ+MMKSN K I IVN+ E +++ETLYGDS RLQQVLA+FL + +N P+GGQL
Sbjct: 974 VASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVLANFLLVCVNSTPSGGQLS 1033
Query: 1031 VSSSLTKDQLGQSVHLAYLELR 1052
+S +LTKD++G+SV LA LE+R
Sbjct: 1034 ISGTLTKDRIGESVQLALLEVR 1055
>sp|P15001|PHYA_PEA Phytochrome A OS=Pisum sativum GN=PHYA PE=3 SV=1
Length = 1124
Score = 1820 bits (4713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 865/1054 (82%), Positives = 963/1054 (91%), Gaps = 3/1054 (0%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60
MS++RP+QSS+N+G+SR+SAR+IAQTT+DAKLHA FE SG+SFDYS+SVRVS + GDQQ
Sbjct: 1 MSTTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGDQQ 60
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
PRS++VTTAYL+HIQ+GK IQPFGCLLALDEKT KV+AYSENAPE+LTMV+HAVPSVGDH
Sbjct: 61 PRSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDH 120
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
P LGIG+DI+T+FTAPSASALQKALGF EVSLLNPILVHCKTSGKPFYAI+HRVTGSLII
Sbjct: 121 PALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 180
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSL SGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDRVM 240
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
AYKFHEDDHGEV++EI K GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC A+HVKV
Sbjct: 241 AYKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 300
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT---LPQK 357
LQDEKLPFDLTLCGSTLRAPHSCHLQYM NM+SIASLVMAVVVND +E+GD+ LPQK
Sbjct: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQK 360
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
+KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELEYQILEKNILRTQTLLC
Sbjct: 361 KKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLC 420
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DMLMRDAPLGIV+QSPNIMDLVKCDGAAL Y+NK+W LG TP + QL +I W+SEYH D
Sbjct: 421 DMLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTESQLREIALWMSEYHTD 480
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAG+ GAL+L D VCGMAAVRI+ KD++FWFRS TA+E+RWGGAKHEP +
Sbjct: 481 STGLSTDSLSDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGD 540
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
+DDGRKMHPRSSFKAFLEVVK RS+PWKD+EMDAIHSLQLILRNA KD +DL+TK+I+
Sbjct: 541 QDDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKAIN 600
Query: 598 SKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAI 657
++L DLKIEGM+ELEAVTSEMVRLIETATVPILAVDVDG VNGWN KIAELTGL V +AI
Sbjct: 601 TRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGEAI 660
Query: 658 GKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
GKH LTLVEDSS D VK+ML LALQG+EE+N+QFEIKTHG ++ PI+LIVNACAS+DL
Sbjct: 661 GKHLLTLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHGDQVESGPISLIVNACASKDL 720
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPA 777
+NVVGVCFVAQDIT QKTVMDKFTRIEGDYKAIVQNPN LIPPIFG+DEFGWCCEWN A
Sbjct: 721 RENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAA 780
Query: 778 MVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGF 837
M+KLTGWKREEV+DK+LL EVFGT M+CCRLKNQEAFVN GIVLNKAM+G + EKVPFGF
Sbjct: 781 MIKLTGWKREEVMDKMLLGEVFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGF 840
Query: 838 FARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALA 897
F+R GKY ECLL V+KK+D EG VTGVFCFLQLAS ELQQALH+QRLSEQTALKRLK L
Sbjct: 841 FSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLT 900
Query: 898 YTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYL 957
Y KRQIRNPL+GI+FS KM+EGT+L EQKR+++TS+QCQRQL KILDDSDLD IIDGYL
Sbjct: 901 YMKRQIRNPLAGIVFSSKMLEGTDLETEQKRIVNTSSQCQRQLSKILDDSDLDGIIDGYL 960
Query: 958 DLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLS 1017
DLEM EFTL+EVLV S+SQVM +SN KGIRI N+ AE I ETLYGDS+RLQQVLADFL
Sbjct: 961 DLEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIARETLYGDSLRLQQVLADFLL 1020
Query: 1018 ISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLEL 1051
ISIN PNGGQ+++++SLTK+QLG+SVHL LEL
Sbjct: 1021 ISINSTPNGGQVVIAASLTKEQLGKSVHLVNLEL 1054
>sp|P30733|PHYA_SOLTU Phytochrome A OS=Solanum tuberosum GN=PHYA PE=2 SV=2
Length = 1123
Score = 1812 bits (4693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1039 (81%), Positives = 945/1039 (90%), Gaps = 3/1039 (0%)
Query: 17 RHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
+HSAR+IAQT+IDAKLHADFE SG SFDYS+SVRV++ A G+Q+P+SD+VTTAYLH IQK
Sbjct: 17 KHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPKSDKVTTAYLHQIQK 76
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAP 136
GK IQPFGCLLALDEKT KVIA+SENAPE+LTMV+HAVPSVG+HPVLGIG DI+TIFT P
Sbjct: 77 GKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGIDIRTIFTGP 136
Query: 137 SASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
S +ALQKALGFGEVSLLNP+LVHCK SGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEI 256
ALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM YKFH+DDHGEVVSEI
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEI 256
Query: 257 TKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGST 316
TK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+HVKV+QDEKLPFDLTLCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG---DNTLPQKRKRLWGLVVCHNTTPR 373
LRAPH CHLQYMENMNSIASLVMAVVVND +EEG D++ QKRKRLWGLVV HNTTPR
Sbjct: 317 LRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVSHNTTPR 376
Query: 374 FVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSP 433
F PFPLRYACEFLAQVFAI VNKELELE Q LEKNILRTQTLLCDMLMRDAPLGIV+QSP
Sbjct: 377 FAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDL+KCDGAALLYKNKI RLG+ P+DFQLHDIVSWL EYH DSTGLS DSLYDAG+ G
Sbjct: 437 NIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
ALALGD VCGMAAVRIS KD +FW+RS TA+EVRWGGAKHEP EKDDGRKMHPRSSFK F
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKGF 556
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVKTRS+PWKDYEMD IHSLQLILRNAFKD ++ +T SIH+KL DLKI+GM+ELEA
Sbjct: 557 LEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTKLNDLKIDGMQELEA 616
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VT+EMVRLIETA+VPI AVDVDG VNGWNTK+AELTGL VD+AIGKH LTLVEDSS+DTV
Sbjct: 617 VTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTV 676
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+ML LALQGQEE+N++FEIKTHG + PI+LIVNACAS+D+ D+VVGVCF+AQDIT
Sbjct: 677 NKMLELALQGQEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDITG 736
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
QK++MDKFTRIEGDY+AI+QNP+PLIPPIFG+D+FGWC EWN AM LTGW+R++V+DK+
Sbjct: 737 QKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTMLTGWRRDDVMDKM 796
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVFGT ACCRLKNQEAFVN G++LN A++GQ+ EK+PFGFFAR GKY ECLLCV+K
Sbjct: 797 LLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFARYGKYVECLLCVSK 856
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
+LD+EGAVTG+FCFLQLASHELQQALHVQRLSEQTALKRLK LAY +RQIRNPLSGIIFS
Sbjct: 857 RLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFS 916
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVAS 973
RKM+EGT LG EQK +LHTSAQCQRQL KILDD+DLDSII+GYLDLEM+EF L+EVLVAS
Sbjct: 917 RKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYLDLEMLEFKLHEVLVAS 976
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
ISQVMMKSN K I I N+ E +++ETLYGDS RLQQVLA+FL +S+N P+GG+L +S
Sbjct: 977 ISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNSTPSGGKLSISG 1036
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
LTKD++G+SV LA LE R
Sbjct: 1037 KLTKDRIGESVQLALLEFR 1055
>sp|P06592|PHYA_CUCPE Phytochrome A OS=Cucurbita pepo GN=PHYA PE=2 SV=1
Length = 1124
Score = 1803 bits (4671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 850/1034 (82%), Positives = 937/1034 (90%), Gaps = 2/1034 (0%)
Query: 21 RVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLI 80
R+IAQT++DA + ADFE SG SFDYS+SVRV+S GDQQPRSD+VTTAYLHHIQKGKLI
Sbjct: 21 RIIAQTSVDANVQADFEESGNSFDYSSSVRVTSDVSGDQQPRSDKVTTAYLHHIQKGKLI 80
Query: 81 QPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASA 140
QPFGCLLALD+KTFKVIAYSENAPE+LTMV+HAVPS+GD+PVLGIG+D++TIFTAPSASA
Sbjct: 81 QPFGCLLALDDKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAPSASA 140
Query: 141 LQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQS 200
L KALGFGEV+LLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYE P+TAAGALQS
Sbjct: 141 LLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEGPVTAAGALQS 200
Query: 201 YKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSG 260
YKLAAKAITRLQSLPSGSM RLCDTM+QEVFELTGYDRVMAYKFH+DDHGEV+SE+ K G
Sbjct: 201 YKLAAKAITRLQSLPSGSMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVAKPG 260
Query: 261 LEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAP 320
L+PYLGLHYPATDIPQAARFLFMKNKVRMIVDCRA+H+KVLQDEKL FDLTLCGSTLRAP
Sbjct: 261 LQPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGSTLRAP 320
Query: 321 HSCHLQYMENMNSIASLVMAVVVN--DEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFP 378
HSCHLQYMENMNSIASLVMAVVVN DEE EG QKRKRLWGLVVCHN++PRFVPFP
Sbjct: 321 HSCHLQYMENMNSIASLVMAVVVNEGDEENEGPALQQQKRKRLWGLVVCHNSSPRFVPFP 380
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
LRYACEFLAQVFAIHVNKELELE QI+EKNILRTQTLLCDMLMRDAPLGIV++SPNIMDL
Sbjct: 381 LRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDL 440
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
VK DGAALLYK KIWRLG+TPNDFQL DI SWLSEYHMDSTGLS DSLYDAGY GA+ALG
Sbjct: 441 VKSDGAALLYKKKIWRLGLTPNDFQLLDIASWLSEYHMDSTGLSTDSLYDAGYPGAIALG 500
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVK 558
D VCGMAAVRI+ DMIFWFRS TASE+RWGGAKHE +KDD RKMHPRSSFKAFLEVVK
Sbjct: 501 DEVCGMAAVRITNNDMIFWFRSHTASEIRWGGAKHEHGQKDDARKMHPRSSFKAFLEVVK 560
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEM 618
TRSLPWKDYEMDAIHSLQLILRN FKD +++ KSI + L DLKIEG +ELE+VTSEM
Sbjct: 561 TRSLPWKDYEMDAIHSLQLILRNTFKDTDATEINRKSIQTTLGDLKIEGRQELESVTSEM 620
Query: 619 VRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLY 678
VRLIETATVPILAVD+DGL+NGWNTKIAELTGL VDKAIGKH LTLVEDSS++ V++ML+
Sbjct: 621 VRLIETATVPILAVDLDGLINGWNTKIAELTGLPVDKAIGKHLLTLVEDSSVEVVRKMLF 680
Query: 679 LALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVM 738
LALQGQEEQN+QFEIKTHGS I I+L+VNACASRDL +NVVGV FVAQDIT QK VM
Sbjct: 681 LALQGQEEQNVQFEIKTHGSHIEVGSISLVVNACASRDLRENVVGVFFVAQDITGQKMVM 740
Query: 739 DKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEV 798
DKFTR+EGDYKAIVQNPNPLIPPIFGSDEFGWC EWNPAM KLTGW REEVIDK+LL EV
Sbjct: 741 DKFTRLEGDYKAIVQNPNPLIPPIFGSDEFGWCSEWNPAMAKLTGWSREEVIDKMLLGEV 800
Query: 799 FGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDRE 858
FG + +CCRLKNQEAFVNLGIVLN AM GQDPEK FGF ARNG Y ECLLCVNK LD++
Sbjct: 801 FGVHKSCCRLKNQEAFVNLGIVLNNAMCGQDPEKASFGFLARNGMYVECLLCVNKILDKD 860
Query: 859 GAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMME 918
GAVTG FCFLQL SHELQQAL++QRL EQTALKRL+AL Y KRQI+NPLSGIIFSR+++E
Sbjct: 861 GAVTGFFCFLQLPSHELQQALNIQRLCEQTALKRLRALGYIKRQIQNPLSGIIFSRRLLE 920
Query: 919 GTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVM 978
TELG EQK LL TS CQ+Q+ K+LD+SD+D IIDG++DLEM EFTL+EVL+ SISQVM
Sbjct: 921 RTELGVEQKELLRTSGLCQKQISKVLDESDIDKIIDGFIDLEMDEFTLHEVLMVSISQVM 980
Query: 979 MKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKD 1038
+K KGI+IVNET E+ MSETLYGDS+RLQQVLADFL IS+++ P+GGQL +S+ +TK+
Sbjct: 981 LKIKGKGIQIVNETPEEAMSETLYGDSLRLQQVLADFLLISVSYAPSGGQLTISTDVTKN 1040
Query: 1039 QLGQSVHLAYLELR 1052
QLG+SVHL +LE R
Sbjct: 1041 QLGKSVHLVHLEFR 1054
>sp|O49934|PHYA_POPTM Phytochrome A OS=Populus tremuloides GN=PHYA PE=2 SV=1
Length = 1125
Score = 1802 bits (4668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 876/1040 (84%), Positives = 943/1040 (90%), Gaps = 10/1040 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
AR+IAQTT+DAKLHADFE SG+SFDYS+SVRV+ + GGDQ PRSD+VTTAYLHHIQKGKL
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKL 79
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQPFGCLLALDEKTF+V+AYSENAPELLTMV+HAVPSVG+HPVLGIG+DI+TIFTAPSAS
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
ALQKA+GFG+VSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDR MAYKFH+DDHGEVVSE+TK
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
G+EPYLGLHYPATDIPQA+RFLFMKNKVRMIVDC A+HVKVLQDEKLPFDLTLCGSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGD---NTLPQKRKRLWGLVVCHNTTPRFVP 376
PHSCHLQYMENMNSIASLVMAVVVND +E+GD + PQKRKRLWGLVVCHNT+PRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVP 379
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 436
FPLRYACEFLAQVFAIHVNKELELE QI+EKNILRTQTLLCDMLMRDAPLGIVTQSPNIM
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 437 DLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALA 496
DLVKCDGA L Y+NKIWRLG+TP+D QL DI WLSEYHMDSTGLS DSLYDAGY GALA
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 497 LGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEV 556
LGDVVCGMAAVRI+ KDM+FWFRSQTA+E+RWGGAKHEP EKDDGR+MHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTS 616
VKTRSLPWKDYEMDAIHSLQLILRN FKD+ T+D+DTK+IH++L DLKIEGM+ELEAVTS
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 617 EMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRM 676
EMVRLIETATVPILAVDVDGLVNGWNTKI+ELTGL VDKAIGKH LTLVEDSS+D VKRM
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRM 679
Query: 677 LYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKT 736
L+LALQG+EEQNIQFEIKTHGSK PI L+VNACASRDLH+NVVGVCFV QDIT QK
Sbjct: 680 LFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQKM 739
Query: 737 VMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLA 796
VMDKFTRIEGDYKAIVQN NPLIPPIFG+DEFGWC EWNPAM LTGWKREEV+DK+LL
Sbjct: 740 VMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLG 799
Query: 797 EVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLD 856
EVFG NMACCRLKNQEAFVNLG+VLN AM+GQ+ EKV FGFFAR GKY ECLLCV+KKLD
Sbjct: 800 EVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLD 859
Query: 857 REGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKM 916
REGAVTGVFCFLQLAS ELQQALHVQRLSEQTALKRLKALAY K+QI NPLSGIIFS KM
Sbjct: 860 REGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIFSGKM 919
Query: 917 MEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQ 976
MEGTELGAEQK LLHTSAQCQ QL KILDDSDLDSII+GYLDLEMVEFTL E S
Sbjct: 920 MEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREYYGCYQSS 979
Query: 977 VMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLT 1036
K + KGI I+N+ + M+ETLYGDSIRLQQVLADF + P+GG L VS+S
Sbjct: 980 HDEK-HEKGIPIINDALK--MAETLYGDSIRLQQVLADFCRCQLILTPSGGLLTVSASFF 1036
Query: 1037 KDQLGQS----VHLAYLELR 1052
+ +G VH L +R
Sbjct: 1037 QRPVGAILFILVHSGKLRIR 1056
>sp|P42500|PHYA_SOYBN Phytochrome A OS=Glycine max GN=PHYA PE=2 SV=1
Length = 1131
Score = 1689 bits (4375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 822/1044 (78%), Positives = 915/1044 (87%), Gaps = 19/1044 (1%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQP 82
+AQ T+DAK+HA FE SG+SFDYS+SVRVS TA G QPRSD+VTTAYL +GK+IQP
Sbjct: 22 MAQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYL----RGKMIQP 77
Query: 83 FGCLLALDEK----TFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSA 138
FGCLLA+DEK T KVIAYSEN PE+LTMV+HAVPSVGDHP LGIG+DIKT+FTAPS
Sbjct: 78 FGCLLAIDEKNHMQTCKVIAYSENEPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSV 137
Query: 139 SALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGAL 198
S LQKALG +VSLLNPILVHCKTSGKPFYAIVHRVTGSLI+DFEPVKPYEVPMTAAGAL
Sbjct: 138 SGLQKALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGAL 197
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QSYKLAAKAITRLQSLPSG+MERLCDTM+QEVFELTGYDRVMAYKFHEDDHGEV+ EITK
Sbjct: 198 QSYKLAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIREITK 257
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
LEPYLGLHYPATDIPQA+RFLF KNKVRMIVDC A+HV+VLQDEKL FDL LCGSTLR
Sbjct: 258 PCLEPYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLR 317
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDN--TLPQKRKRLWGLVVCHNTTPRFVP 376
APHSCH QYM NM+SIASLV+AVVVND EE+GD PQK +RLWGLVVCHNTTPRFVP
Sbjct: 318 APHSCHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKTERLWGLVVCHNTTPRFVP 377
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 436
FPLRYA EFL QVFA HV+KE+ELEYQI+EKNIL L MLMRDAPLGI ++SPNIM
Sbjct: 378 FPLRYAREFLPQVFADHVHKEIELEYQIIEKNILHHPGHLLCMLMRDAPLGIASESPNIM 437
Query: 437 DLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALA 496
DLVKCDGAAL+Y+NK+WRLGVTP++ Q+ +I WLSEYHMDST S DSL+DAG+ AL+
Sbjct: 438 DLVKCDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTSFSTDSLFDAGFPSALS 497
Query: 497 LGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEV 556
LGDVVCGMA+VR++ KDM+FWFRS TA+E+RWGGAKHE EKDD R+MHPRSSFKAFLEV
Sbjct: 498 LGDVVCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEV 557
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFK-DVGTLDLDTKSIHSKLCDLKIEG-------- 607
VK RSLPWK+YEMDAIHSLQ+ILRNAFK D +LDL+ K+I+++L DLKIEG
Sbjct: 558 VKARSLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLRDLKIEGINDLKIER 617
Query: 608 MKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVED 667
M+ELEAVTSE+VRL TATVPILAVDVDGLVNGWN KIAELTGL + +A GKH LTLVED
Sbjct: 618 MQELEAVTSEIVRLDYTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVED 677
Query: 668 SSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFV 727
SS D VK+ML LAL G+EE+N+QFEIKT GSK++ PI+L+VN CASRDL DNVVGVCFV
Sbjct: 678 SSTDRVKKMLNLALLGEEEKNVQFEIKTLGSKMDSGPISLVVNRCASRDLRDNVVGVCFV 737
Query: 728 AQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKRE 787
A DIT QK VMDKF RIEGDYKAIVQN NPLIPPIFG+DEFGWCCEWNPAM+KLTGWKRE
Sbjct: 738 AHDITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAMMKLTGWKRE 797
Query: 788 EVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAEC 847
EV+DK+LL E+FGT MA CRLKNQEAFVNLG+VLNKAM+G + EKVPFGFFARNGKY EC
Sbjct: 798 EVMDKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETEKVPFGFFARNGKYVEC 857
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL V+KKLD EG VTGVFCFLQLAS ELQQALH+QRLSEQTA KRL AL+Y KRQIRNPL
Sbjct: 858 LLSVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRLNALSYMKRQIRNPL 917
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
GI+FSRKM+EGT+LG EQK+LL TSAQCQ+QL KILDDSDLD+IIDGYLDLEM EFTL+
Sbjct: 918 CGIVFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTIIDGYLDLEMAEFTLH 977
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
EVLV S+SQVM KSN K IRIVN+ A IM ETLYGDS+RLQQVLADFL ISINF PNGG
Sbjct: 978 EVLVTSLSQVMEKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQVLADFLLISINFTPNGG 1037
Query: 1028 QLMVSSSLTKDQLGQSVHLAYLEL 1051
Q++V+ SLTK+QLG+SVHL LEL
Sbjct: 1038 QVVVAGSLTKEQLGKSVHLVKLEL 1061
>sp|P55141|PHYA_PETCR Phytochrome A OS=Petroselinum crispum GN=PHYA PE=2 SV=1
Length = 1129
Score = 1660 bits (4298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 776/1050 (73%), Positives = 905/1050 (86%), Gaps = 10/1050 (0%)
Query: 12 NTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYL 71
N G++ +ARV+ TT+DAK+HADFE SG SFDYS+SVRV+S G + +S+++TTAYL
Sbjct: 12 NPGRANQNARVVL-TTLDAKIHADFEESGNSFDYSSSVRVTSAVGENSSIQSNKLTTAYL 70
Query: 72 HHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKT 131
HHIQKGKLIQP GCLLA+DEK+FK++AYSENAPE+LTMV+HAVPSVG+HPVLGIG+D++T
Sbjct: 71 HHIQKGKLIQPVGCLLAVDEKSFKIMAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRT 130
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
IFTAPSA+ALQKA+GF +++LLNPILVHCKTSGKPFYAI HRVTGSLIIDFEPVKPYEVP
Sbjct: 131 IFTAPSAAALQKAVGFTDINLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEVP 190
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
MTAAGALQSYKLA+KA+ RLQ+LP GSMERLCDTM+QEVFELTGYDRVMAYKFH+DDHGE
Sbjct: 191 MTAAGALQSYKLASKAVNRLQALPGGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGE 250
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
V +E+TK GLEPY GLHYPATD+PQAARFLF+KNKVRMI DCRA VLQDEKLPF+LT
Sbjct: 251 VTAEVTKPGLEPYFGLHYPATDVPQAARFLFLKNKVRMICDCRANSAPVLQDEKLPFELT 310
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEE--EGDNTLPQKRKRLWGLVVCHN 369
LCGSTLRAPHSCHLQYMENMNSIASLVMAVV+ND +E E + K K+LWGLVVCHN
Sbjct: 311 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVINDSDEVVESSDRNSVKSKKLWGLVVCHN 370
Query: 370 TTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIV 429
T+PRFVPFPLRYACEFLAQVFAIHV+KELELE QI+EKNILRTQTLLCD+LMRDAPLGIV
Sbjct: 371 TSPRFVPFPLRYACEFLAQVFAIHVSKELELENQIVEKNILRTQTLLCDLLMRDAPLGIV 430
Query: 430 TQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDA 489
+QSPN+MDLVKCDGAALLYKNK++RLG TP+D+QL DIVSWL+EYH DSTGLS DSLYDA
Sbjct: 431 SQSPNMMDLVKCDGAALLYKNKVYRLGATPSDYQLRDIVSWLTEYHTDSTGLSTDSLYDA 490
Query: 490 GYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSS 549
GY GALALGDVVCGMA V+I+ DM+FWFRS A +RWGGAK EPDE DGRKMHPRSS
Sbjct: 491 GYPGALALGDVVCGMAVVKITSHDMLFWFRSHAAGHIRWGGAKAEPDENHDGRKMHPRSS 550
Query: 550 FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF---KDVGT----LDLDTKSIHSKLCD 602
FKAFLEVVKTRS WK++EMDAIHSLQLILR A K V + +T IH+KL D
Sbjct: 551 FKAFLEVVKTRSTTWKEFEMDAIHSLQLILRKALSVEKAVAAQGDEIRSNTDVIHTKLND 610
Query: 603 LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFL 662
LKIEG++ELEAVTSEMVRLIETATVPI AVD D +VNGWNTKIAELTGL VD+A+GKH L
Sbjct: 611 LKIEGIQELEAVTSEMVRLIETATVPIFAVDADEIVNGWNTKIAELTGLPVDQAMGKHLL 670
Query: 663 TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVV 722
TLVEDSS+ TV +L LALQG+EEQ I FE KT+GS+ + PIT++VNACA+R LHDNVV
Sbjct: 671 TLVEDSSVGTVVFLLALALQGKEEQGIPFEFKTYGSREDSVPITVVVNACATRGLHDNVV 730
Query: 723 GVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLT 782
GVCFVAQD+T QKT+MDKFTRI+GDYKAIVQNPNPLIPPIFG+DEFGWC EWN AM +L+
Sbjct: 731 GVCFVAQDVTSQKTIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNQAMTELS 790
Query: 783 GWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNG 842
GW+RE+V++K+LL E+FG +CC LK++EAFVNLG+VLN A++GQ EK+ F FFA +G
Sbjct: 791 GWRREDVMNKMLLGEIFGIQTSCCHLKSKEAFVNLGVVLNNALTGQISEKICFSFFATDG 850
Query: 843 KYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQ 902
KY ECLLC +KKL EG VTG+FCFLQLAS ELQQALH+QRL+EQTA+KRLK L+Y +RQ
Sbjct: 851 KYVECLLCASKKLHGEGTVTGIFCFLQLASQELQQALHIQRLTEQTAMKRLKTLSYLRRQ 910
Query: 903 IRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMV 962
+NPL GI F R+ +E +G EQ +L TS CQR ++KILDD+DLDSIIDGYLDLEM
Sbjct: 911 AKNPLCGINFVREKLEEIGMGEEQTKLFRTSVHCQRHVNKILDDTDLDSIIDGYLDLEMS 970
Query: 963 EFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINF 1022
EF L++V VAS SQV M+SN K I++V+ +E++MSETLYGDS+RLQ+VLADF+S+ +N
Sbjct: 971 EFRLHDVYVASRSQVSMRSNGKAIQVVDNFSEEMMSETLYGDSLRLQKVLADFMSVCVNL 1030
Query: 1023 VPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
P GG L +S +LT+D LGQSV L +LE R
Sbjct: 1031 TPVGGHLGISVTLTEDNLGQSVQLVHLEFR 1060
>sp|Q10DU0|PHYA_ORYSJ Phytochrome A OS=Oryza sativa subsp. japonica GN=PHYA PE=2 SV=1
Length = 1128
Score = 1464 bits (3791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 703/1067 (65%), Positives = 869/1067 (81%), Gaps = 22/1067 (2%)
Query: 1 MSSSRPAQ--SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGD 58
MSSSRP Q SSS+ + AR++AQTT+DA+L+A++E G SFDYS V T G +
Sbjct: 1 MSSSRPTQCSSSSSRTRQSSRARILAQTTLDAELNAEYEEYGDSFDYSKLVEAQRTTGPE 60
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
QQ RS++V AYLHHIQ+ KLIQPFGCLLALDEKTF VIA SENAPE+LT V+HAVPSV
Sbjct: 61 QQARSEKVI-AYLHHIQRAKLIQPFGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVD 119
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
D P L IG+++ ++FT P A+ALQKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L
Sbjct: 120 DPPKLRIGTNVWSLFTDPGATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCL 179
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
++DFEPVKP E P TAAGALQSYKLAAKAI+++QSLP GSME LC+T+++E+F+LTGYDR
Sbjct: 180 VVDFEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDR 239
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VMAYKFHEDDHGEV +EITK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRAR +
Sbjct: 240 VMAYKFHEDDHGEVFAEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSI 299
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD-----NT 353
K+++DE L D++LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN+ E++ +
Sbjct: 300 KIIEDESLHLDISLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPA 359
Query: 354 LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
QKRK+LWGL+VCH+ +PR+VPFPLRYACEFLAQVFA+HVNKE ELE Q+ EK+ILR Q
Sbjct: 360 QQQKRKKLWGLLVCHHESPRYVPFPLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQ 419
Query: 414 TLLCDMLMRDA-PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLS 472
T+L DML+R++ PL IV+ +PNIMDLVKCDGAALLY K+WRL P + Q+ DI WLS
Sbjct: 420 TMLSDMLLRESSPLSIVSGTPNIMDLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLS 479
Query: 473 EYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
+ H DSTGLS DSL+DAGY GA ALGD++CGMA +I+ KD++FWFRS TA+E+RWGGAK
Sbjct: 480 DVHRDSTGLSTDSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAK 539
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD 592
H+P +KDD R+MHPR SFKAFLEVVK +SLPW DYEMDAIHSLQLILR GTL+ D
Sbjct: 540 HDPSDKDDSRRMHPRLSFKAFLEVVKMKSLPWNDYEMDAIHSLQLILR------GTLNDD 593
Query: 593 TK-----SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAE 647
K S+ +++ DLK++G+ EL+AVTSEMVRL+ETATVPILAVD +GLVNGWN K+AE
Sbjct: 594 IKPTRAASLDNQVGDLKLDGLAELQAVTSEMVRLMETATVPILAVDSNGLVNGWNQKVAE 653
Query: 648 LTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
LTGL VD+AIG+H LT+VE+SS+ V+RMLYLALQG+EE+ ++FE+KTHGSK +D P+ L
Sbjct: 654 LTGLRVDEAIGRHILTVVEESSVPVVQRMLYLALQGKEEKEVKFEVKTHGSKRDDGPVIL 713
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNACASRDLHD+VVGVCFVAQD+T K VMDKFTR+EGDYKAI+ NP+PLIPPIFG+DE
Sbjct: 714 VVNACASRDLHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIIHNPSPLIPPIFGADE 773
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
FGWC EWN AM KLTGW R+EVI+K+LL EVF + A C +KN++AFV+L I++N A++G
Sbjct: 774 FGWCSEWNAAMTKLTGWHRDEVINKMLLGEVFDSTNASCLVKNKDAFVSLCILINSALAG 833
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
+ EK PF FF RNGKY ECLL VN+K++ +G +TGVFCF+Q+ SHELQ ALHVQ+ S+Q
Sbjct: 834 DETEKAPFSFFDRNGKYIECLLSVNRKVNADGVITGVFCFIQVPSHELQHALHVQQASQQ 893
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
AL +LKA +Y + I NPLSG+++SRK ++ T L EQ + ++ + C RQL+KIL D
Sbjct: 894 NALTKLKAYSYMRHAINNPLSGMLYSRKALKNTGLNEEQMKEVNVADSCHRQLNKILSDL 953
Query: 948 DLDSIID--GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDS 1005
D DS+++ LDLEMVEF L +V VA++SQV++ KGIR+ E+ M +T+YGD
Sbjct: 954 DQDSVMNKSSCLDLEMVEFVLQDVFVAAVSQVLITCQGKGIRVSCNLPERYMKQTVYGDG 1013
Query: 1006 IRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+RLQQ+L+DFL +S+ F P GG + +S SLTK+ +G+++HL LELR
Sbjct: 1014 VRLQQILSDFLFVSVKFSPVGGSVEISCSLTKNSIGENLHLIDLELR 1060
>sp|A2XLG5|PHYA_ORYSI Phytochrome A OS=Oryza sativa subsp. indica GN=PHYA PE=2 SV=2
Length = 1128
Score = 1464 bits (3791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 703/1067 (65%), Positives = 869/1067 (81%), Gaps = 22/1067 (2%)
Query: 1 MSSSRPAQ--SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGD 58
MSSSRP Q SSS+ + AR++AQTT+DA+L+A++E G SFDYS V T G +
Sbjct: 1 MSSSRPTQCSSSSSRTRQSSRARILAQTTLDAELNAEYEEYGDSFDYSKLVEAQRTTGPE 60
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
QQ RS++V AYLHHIQ+ KLIQPFGCLLALDEKTF VIA SENAPE+LT V+HAVPSV
Sbjct: 61 QQARSEKVI-AYLHHIQRAKLIQPFGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVD 119
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
D P L IG+++ ++FT P A+ALQKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L
Sbjct: 120 DPPKLRIGTNVWSLFTDPGATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCL 179
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
++DFEPVKP E P TAAGALQSYKLAAKAI+++QSLP GSME LC+T+++E+F+LTGYDR
Sbjct: 180 VVDFEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDR 239
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VMAYKFHEDDHGEV +EITK GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRAR +
Sbjct: 240 VMAYKFHEDDHGEVFAEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSI 299
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD-----NT 353
K+++DE L D++LCGSTLRAPHSCHLQYMENMNSIASLVMAVVVN+ E++ +
Sbjct: 300 KIIEDESLHLDISLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPA 359
Query: 354 LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
QKRK+LWGL+VCH+ +PR+VPFPLRYACEFLAQVFA+HVNKE ELE Q+ EK+ILR Q
Sbjct: 360 QQQKRKKLWGLLVCHHESPRYVPFPLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQ 419
Query: 414 TLLCDMLMRDA-PLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLS 472
T+L DML+R++ PL IV+ +PNIMDLVKCDGAALLY K+WRL P + Q+ DI WLS
Sbjct: 420 TMLSDMLLRESSPLSIVSGTPNIMDLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLS 479
Query: 473 EYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
+ H DSTGLS DSL+DAGY GA ALGD++CGMA +I+ KD++FWFRS TA+E+RWGGAK
Sbjct: 480 DVHRDSTGLSTDSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAK 539
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD 592
H+P +KDD R+MHPR SFKAFLEVVK +SLPW DYEMDAIHSLQLILR GTL+ D
Sbjct: 540 HDPSDKDDSRRMHPRLSFKAFLEVVKMKSLPWNDYEMDAIHSLQLILR------GTLNDD 593
Query: 593 TK-----SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAE 647
K S+ +++ DLK++G+ EL+AVTSEMVRL+ETATVPILAVD +GLVNGWN K+AE
Sbjct: 594 IKPTRAASLDNQVGDLKLDGLAELQAVTSEMVRLMETATVPILAVDSNGLVNGWNQKVAE 653
Query: 648 LTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
LTGL VD+AIG+H LT+VE+SS+ V+RMLYLALQG+EE+ ++FE+KTHGSK +D P+ L
Sbjct: 654 LTGLRVDEAIGRHILTVVEESSVPVVQRMLYLALQGKEEKEVKFEVKTHGSKRDDGPVIL 713
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNACASRDLHD+VVGVCFVAQD+T K VMDKFTR+EGDYKAI+ NP+PLIPPIFG+DE
Sbjct: 714 VVNACASRDLHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIIHNPSPLIPPIFGADE 773
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
FGWC EWN AM KLTGW R+EVI+K+LL EVF + A C +KN++AFV+L I++N A++G
Sbjct: 774 FGWCSEWNAAMTKLTGWHRDEVINKMLLGEVFDSTNASCLVKNKDAFVSLCILINSALAG 833
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
+ EK PF FF RNGKY ECLL VN+K++ +G +TGVFCF+Q+ SHELQ ALHVQ+ S+Q
Sbjct: 834 DETEKAPFSFFDRNGKYIECLLSVNRKVNADGVITGVFCFIQVPSHELQHALHVQQASQQ 893
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
AL +LKA +Y + I NPLSG+++SRK ++ T L EQ + ++ + C RQL+KIL D
Sbjct: 894 NALTKLKAYSYMRHAINNPLSGMLYSRKALKNTGLNEEQMKEVNVADSCHRQLNKILSDL 953
Query: 948 DLDSIID--GYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDS 1005
D DS+++ LDLEMVEF L +V VA++SQV++ KGIR+ E+ M +T+YGD
Sbjct: 954 DQDSVMNKSSCLDLEMVEFVLQDVFVAAVSQVLITCQGKGIRVSCNLPERYMKQTVYGDG 1013
Query: 1006 IRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+RLQQ+L+DFL +S+ F P GG + +S SLTK+ +G+++HL LELR
Sbjct: 1014 VRLQQILSDFLFVSVKFSPVGGSVEISCSLTKNSIGENLHLIDLELR 1060
>sp|P93526|PHYA_SORBI Phytochrome a OS=Sorghum bicolor GN=PHYA PE=2 SV=1
Length = 1131
Score = 1461 bits (3782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/1041 (65%), Positives = 846/1041 (81%), Gaps = 10/1041 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
AR++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKL
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVI-AYLQHIQRGKL 80
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQPFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGAT 140
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
ALQKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQ
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 200
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++QSLP GSME LC+T+++EVFELTGYDRVMAYKFHED+HGEV +EITK
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
G+EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRA+ VK+++DE L D++LCGSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRK-----RLWGLVVCHNTTPRF 374
PHSCHLQYMENMNSIASLVMAVVVN+ EE+ + Q + RLWGL+VCH+ +PR+
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVNKE ELE QI EK+ILR QT+L DML ++A PL IV+ SP
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DAGY G
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A +LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+A
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLND-ALKPVQASGLDNQIGDLKLDGLAELQA 619
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V
Sbjct: 620 VTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIV 679
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 680 QRMLYLALQGKEEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 739
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EVIDK+
Sbjct: 740 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNVAMTKLTGWHRDEVIDKM 799
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF ++ A C LK+++ FV L I++N A++G++ E PFG F RNGKY ECLL VN+
Sbjct: 800 LLGEVFDSSNASCLLKSKDDFVRLCIIINSALAGEEAENAPFGLFDRNGKYIECLLSVNR 859
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
K++ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA +RLKA +Y + I PLSG+++S
Sbjct: 860 KVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRRLKAFSYMRHAINKPLSGMLYS 919
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
R+ ++ T L EQ R +H + C RQL+KIL D D D+I D LDL+M EF L +V+V
Sbjct: 920 RETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLEDVVV 979
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
+++SQV++ KGIR+ E+ M + +YGD IRLQQ+L+DFL +S+ F P GG + +
Sbjct: 980 SAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPVGGSVDI 1039
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
SS LTK+ +G+++HL ELR
Sbjct: 1040 SSKLTKNSIGENLHLIDFELR 1060
>sp|P19862|PHYA1_MAIZE Phytochrome A OS=Zea mays GN=PHYA1 PE=3 SV=1
Length = 1131
Score = 1449 bits (3752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/1039 (65%), Positives = 847/1039 (81%), Gaps = 10/1039 (0%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
++AQTT+DA+L+A++E SG SFDYS V + +QQ RS +V AYL HIQ+GKLIQ
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPPEQQGRSGKVI-AYLQHIQRGKLIQ 82
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLALDEK+F+VIA+SENAPE+LT V+HAVP+V D P LGIG++++++FT P A+AL
Sbjct: 83 PFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATAL 142
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
QKALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQSY
Sbjct: 143 QKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSY 202
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+++QSLP GSME LC+T+++EVF+LTGYDRVMAYKFHED+HGEV +EITK G+
Sbjct: 203 KLAAKAISKIQSLPGGSMEALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEITKPGI 262
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPY+GLHYPATDIPQAARFLFMKNKVRMI DCRAR VK+++DE L D++LCGSTLRAPH
Sbjct: 263 EPYIGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGSTLRAPH 322
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ-----KRKRLWGLVVCHNTTPRFVP 376
SCHL+YMENMNSIASLVMAVVVN+ EE+ + Q K+KRLWGL+VCH+ +PR+VP
Sbjct: 323 SCHLKYMENMNSIASLVMAVVVNENEEDDEPEPEQPPQQQKKKRLWGLIVCHHESPRYVP 382
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSPNI 435
FPLRYACEFLAQVFA+HVNKE ELE QI EKNILR QT+L DML +++ PL IV+ SPNI
Sbjct: 383 FPLRYACEFLAQVFAVHVNKEFELEKQIREKNILRMQTMLSDMLFKESSPLSIVSGSPNI 442
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLY +K+WRL P + Q+ DI WLSE H DSTGLS DSL DAGY GA
Sbjct: 443 MDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAA 502
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
+LGD++CGMA +I+ KD++FWFRS TA+E++WGGAKH+P +KDD R+MHPR SFKAFLE
Sbjct: 503 SLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLE 562
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVKT+SLPW DYEMDAIHSLQLILR D + + +++ DLK++G+ EL+AVT
Sbjct: 563 VVKTKSLPWSDYEMDAIHSLQLILRGTLND-ASKPAQASGLDNQIGDLKLDGLAELQAVT 621
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKR 675
SEMVRL+ETATVPILAVD +GLVNGWN K+AEL+GL VD+AIG+H LTLVEDSS+ V+R
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSLVQR 681
Query: 676 MLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQK 735
MLYLALQG+EE+ ++FE+KTHGSK +D P+ L+VNACASRDLHD+VVGVCFVAQD+T K
Sbjct: 682 MLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 741
Query: 736 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLL 795
VMDKFTR+EGDYKAI+ NPNPLIPPIFG+D+FGWC EWN AM KLTGW R+EV+DK+LL
Sbjct: 742 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADQFGWCSEWNAAMTKLTGWHRDEVVDKMLL 801
Query: 796 AEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKL 855
EVF ++ A C LK+++AFV L IV+N A++G++ EK FGFF RN KY ECLL VN+K+
Sbjct: 802 GEVFNSSNASCLLKSKDAFVRLCIVINSALAGEEAEKASFGFFDRNEKYVECLLSVNRKV 861
Query: 856 DREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRK 915
+ +G VTGVFCF+ + S +LQ ALHVQ+ SEQTA ++LKA +Y + I PLSG+++SR+
Sbjct: 862 NADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRKLKAFSYMRHAINKPLSGMLYSRE 921
Query: 916 MMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLVAS 973
++ T L EQ R + C RQL+KIL D D D+I D LDL+M EF L +V+V++
Sbjct: 922 TLKSTGLNEEQMRQVRVGDNCHRQLNKILADLDQDNITDKSSCLDLDMAEFVLQDVVVSA 981
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
+SQV++ AKGIR+ E+ M + +YGD IRLQQ+++DFL +S+ F P GG + +SS
Sbjct: 982 VSQVLIGCQAKGIRVACNLPERSMKQKVYGDGIRLQQIVSDFLFVSVKFSPAGGSVDISS 1041
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
LTK+ +G+++HL ELR
Sbjct: 1042 KLTKNSIGENLHLIDFELR 1060
>sp|P06593|PHYA3_AVESA Phytochrome A type 3 OS=Avena sativa GN=PHYA3 PE=1 SV=3
Length = 1129
Score = 1449 bits (3752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 690/1041 (66%), Positives = 845/1041 (81%), Gaps = 10/1041 (0%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
ARV+AQTT+DA+L+A++E SG SFDYS V QQ RS++V AYL HIQKGKL
Sbjct: 20 ARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVI-AYLQHIQKGKL 78
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQ FGCLLALDEK+F VIA+SENAPE+LT V+HAVPSV D P LGIG++++++F+ A+
Sbjct: 79 IQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGAT 138
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQ
Sbjct: 139 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 198
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++QSLP GSME LC+T+++EVF+LTGYDRVMAYKFHEDDHGEV SEITK
Sbjct: 199 SYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEITKP 258
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAAR LFMKNKVRMI DCRAR +KV++ E LPFD++LCGS LRA
Sbjct: 259 GLEPYLGLHYPATDIPQAARLLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRA 318
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ-----KRKRLWGLVVCHNTTPRF 374
PHSCHLQYMENMNSIASLVMAVVVN+ EE+ + Q K+K+LWGL+VCH+ +PR+
Sbjct: 319 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESPRY 378
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVN+E ELE Q+ EKNIL+ QT+L DML R+A PL IV+ +P
Sbjct: 379 VPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSGTP 438
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLG 493
NIMDLVKCDGAALLY K+WRL P + Q+HDI WLS+ H DSTGLS DSL+DAGY G
Sbjct: 439 NIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPG 498
Query: 494 ALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAF 553
A ALGD++CGMA +I+ KD++FWFRS TA+E+RWGGAK++P + DD R+MHPR SFKAF
Sbjct: 499 AAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSFKAF 558
Query: 554 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEA 613
LEVVK +SLPW DYEMDAIHSLQLILR D + S+ +++ DLK++G+ EL+A
Sbjct: 559 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREA-SLDNQIGDLKLDGLAELQA 617
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTV 673
VTSEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVEDSS+ V
Sbjct: 618 VTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEDSSVPVV 677
Query: 674 KRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITP 733
+RMLYLALQG+EE+ ++FE+KTHG K +D P+ L+VNACASRDLHD+VVGVCFVAQD+T
Sbjct: 678 QRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTV 737
Query: 734 QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKL 793
K VMDKFTR+EGDYKAI+ NPNPLIPPIFG+DEFGWC EWN AM KLTGW R+EV+DK+
Sbjct: 738 HKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVLDKM 797
Query: 794 LLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNK 853
LL EVF ++ A C LKN++AFV+L +++N A++G++ EK PFGFF R+GKY ECLL N+
Sbjct: 798 LLGEVFDSSNASCPLKNRDAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLSANR 857
Query: 854 KLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFS 913
K + G +TGVFCF+ +ASHELQ AL VQ+ SEQT+LKRLKA +Y + I NPLSG+++S
Sbjct: 858 KENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGMLYS 917
Query: 914 RKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLV 971
RK ++ T+L EQ + +H C Q++KIL D D DSI + LDLEM EF L +V+V
Sbjct: 918 RKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSITEKSSCLDLEMAEFLLQDVVV 977
Query: 972 ASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMV 1031
A++SQV++ KGIRI E+ M +++YGD +RLQQ+L+DFL IS+ F P GG + +
Sbjct: 978 AAVSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQILSDFLFISVKFSPVGGSVEI 1037
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
SS LTK+ +G+++HL LELR
Sbjct: 1038 SSKLTKNSIGENLHLIDLELR 1058
>sp|P06594|PHYA4_AVESA Phytochrome A type 4 OS=Avena sativa GN=PHYA4 PE=1 SV=3
Length = 1129
Score = 1438 bits (3723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/1039 (65%), Positives = 841/1039 (80%), Gaps = 10/1039 (0%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
V+AQTT+DA+L+A++E SG SFDYS V QQ RS++V AYL HIQKGKLIQ
Sbjct: 22 VLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVI-AYLQHIQKGKLIQ 80
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
FGC+LALDEK+F VIA+SENAPE+LT V+HAVPSV D P LGIG++++++F+ A+AL
Sbjct: 81 TFGCMLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGATAL 140
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQSY
Sbjct: 141 HKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSY 200
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+++QSLP GSME LC+T+++EVF+LTGYDRVMAYKFHEDDHGEV +EITK GL
Sbjct: 201 KLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFAEITKPGL 260
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQAARFLFMKNKVRMI DCRAR +KV++ E LPFD++LCGS LRAPH
Sbjct: 261 EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRAPH 320
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ-----KRKRLWGLVVCHNTTPRFVP 376
SCHLQYMENMNSIASLVMAVVVN+ EE+ + Q ++K+LWGL+VCH+ +PR+VP
Sbjct: 321 SCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQQKKKLWGLLVCHHESPRYVP 380
Query: 377 FPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSPNI 435
FPLRYACEFLAQVFA+HVN+E ELE Q+ EK+IL+ QT+L DML R+A PL IV+ +PNI
Sbjct: 381 FPLRYACEFLAQVFAVHVNREFELEKQLREKSILKMQTMLSDMLFREASPLTIVSGAPNI 440
Query: 436 MDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGAL 495
MDLVKCDGAALLY K+WRL P + Q+HDI WLS+ H DSTGLS DSL+DAGY GA
Sbjct: 441 MDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPGAS 500
Query: 496 ALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLE 555
ALGD++CGMA +I+ KD+IFWFRS TA+E+RWGGAKH+ + DD R+MHPR SFKAFLE
Sbjct: 501 ALGDMICGMAVAKINSKDIIFWFRSHTAAEIRWGGAKHDSSDMDDSRRMHPRLSFKAFLE 560
Query: 556 VVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVT 615
VVK +SLPW DYEMDAIHSLQLILR D + S+ +++ DLK++G+ EL+AVT
Sbjct: 561 VVKMKSLPWTDYEMDAIHSLQLILRGTLNDASKPKREA-SLDNQIGDLKLDGLAELQAVT 619
Query: 616 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKR 675
SEMVRL+ETATVPILAVD +GLVNGWN K AELTGL VD AIG+H LTLVE+SS+ V+R
Sbjct: 620 SEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVPVVQR 679
Query: 676 MLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQK 735
MLYLALQG+EE+ ++FE+KTHG + +D P+ L+VNACASRDLHD+VVGVCFVAQD+T K
Sbjct: 680 MLYLALQGKEEKEVRFEVKTHGPRRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHK 739
Query: 736 TVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLL 795
VMDKFTR+EGDYKAI+ NPNPLIPPIFG+DEFGWC EWN AM KLTGW R+EV+DK+LL
Sbjct: 740 LVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWNRDEVLDKMLL 799
Query: 796 AEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKL 855
EVF ++ A C LKN+ AFV+L +++N A++G++ EK PFGFF R+GKY ECLL N+K
Sbjct: 800 GEVFDSSNASCPLKNKNAFVSLCVLINSALAGEETEKAPFGFFDRSGKYIECLLSANRKE 859
Query: 856 DREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRK 915
+ G +TGVFCF+ +ASHELQ AL VQ+ SEQT+LKRLKA +Y + I NPLSG+++SRK
Sbjct: 860 NEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAFSYMRHAINNPLSGMLYSRK 919
Query: 916 MMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIID--GYLDLEMVEFTLNEVLVAS 973
++ T+L EQ + +H C Q++KIL D D DSI + LDLEM EF +V+VA+
Sbjct: 920 ALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSISEKSSCLDLEMAEFVFQDVVVAA 979
Query: 974 ISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSS 1033
+SQV++ KGIRI E+ M +++YGD +RLQQ+L+DFL IS+ F P GG + +SS
Sbjct: 980 VSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQILSDFLFISVKFSPVGGSVEISS 1039
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
LTK+ +G+++HL LELR
Sbjct: 1040 KLTKNSIGENLHLIDLELR 1058
>sp|Q40762|PHY_PICAB Phytochrome OS=Picea abies PE=2 SV=1
Length = 1136
Score = 1320 bits (3417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1073 (60%), Positives = 821/1073 (76%), Gaps = 27/1073 (2%)
Query: 1 MSSSRPAQSS------SNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSST 54
MS++RP ++ S + S+HSARVI QT +DAKL A+FE S SFDY+ S+ +S
Sbjct: 1 MSTTRPRAATHSASSGSVSRSSKHSARVITQTPVDAKLQAEFEGSVHSFDYTKSIDISGD 60
Query: 55 AGGDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVN--H 112
+ AYL +QK LIQPFGC+LA++E + V+ YSENAPE+L +V H
Sbjct: 61 S----SSVPSETVKAYLQRLQKEMLIQPFGCVLAVEEGSCAVVGYSENAPEMLDVVGGAH 116
Query: 113 AVPSVGDHP---------VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTS 163
AVPS+G +L IG D +T+F SA+ALQKA F ++ L+NPI V C S
Sbjct: 117 AVPSIGGQQQEGGGGGGGLLRIGMDARTLFKPASAAALQKAATFADMHLVNPIFVRCNRS 176
Query: 164 GKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLC 223
GKPFYAI++R+ L+IDFEPV P +VP++AAGALQSYKLAAKAI+RLQSLP G + LC
Sbjct: 177 GKPFYAILNRIDAGLVIDFEPVMPSDVPVSAAGALQSYKLAAKAISRLQSLPGGDIRLLC 236
Query: 224 DTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFM 283
DT++QEV ELTGYDRVMAY+FHED+HGEVV+E+ + LEPYLGLHYPATDIPQA+RFLFM
Sbjct: 237 DTVVQEVRELTGYDRVMAYRFHEDEHGEVVAEMRRPDLEPYLGLHYPATDIPQASRFLFM 296
Query: 284 KNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVV 343
KN+VRMI DC A V V+QD++L L+LCGSTLRAPH CH QYM NM SIASLVM+V
Sbjct: 297 KNRVRMICDCCAPPVNVIQDKRLRQPLSLCGSTLRAPHGCHAQYMANMGSIASLVMSVTT 356
Query: 344 N---DEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELEL 400
N D+ E G PQ R++LWGLVVCH+T+PR +PFPLRYACEFL QVF I +NKE+EL
Sbjct: 357 NENGDDSEGGGQQQPQNRRKLWGLVVCHHTSPRVIPFPLRYACEFLMQVFGIQLNKEVEL 416
Query: 401 EYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPN 460
Q+ EK+ILR Q +LCDML+RDAP+GIV+Q+PNIMDLVKCDGAALLY ++W LG TP
Sbjct: 417 AAQLREKHILRVQPVLCDMLLRDAPVGIVSQTPNIMDLVKCDGAALLYGKRLWLLGTTPT 476
Query: 461 DFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRS 520
+ Q+ DI WL E+H DSTGLS DSL +AGY GA +LGD VCG+AA RI+ KD +FWFRS
Sbjct: 477 EAQILDIADWLLEHHRDSTGLSTDSLAEAGYPGAASLGDAVCGIAAARITSKDFLFWFRS 536
Query: 521 QTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILR 580
TA E+ WGGAKH+P++KDDGR+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 537 HTAKEIIWGGAKHDPNDKDDGRRMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILR 596
Query: 581 NAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVN 639
++F D+ D D+K+ IH++L DL+++G+ EL AVT+EMVRLIETATVPILA+D +GLVN
Sbjct: 597 DSFHDID--DSDSKTMIHARLNDLRLQGIDELSAVTNEMVRLIETATVPILAIDSNGLVN 654
Query: 640 GWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSK 699
GWNTK AELTGL D+ IG+ + LV+ S++ VK+MLYLALQG+EEQN++ ++KT G +
Sbjct: 655 GWNTKAAELTGLLADEVIGRPLIDLVQHDSVEIVKKMLYLALQGEEEQNVEIKLKTFGIQ 714
Query: 700 INDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLI 759
P+ LIVNAC+SRDL +NVVGVCFVAQD+T Q+ MDKFT ++GDY+AIVQNPNPLI
Sbjct: 715 EEKGPVVLIVNACSSRDLEENVVGVCFVAQDVTWQRIAMDKFTHLQGDYRAIVQNPNPLI 774
Query: 760 PPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGI 819
PPIFG+DE+G+C EWNPAM KLTGWKREEVI K+L+ EVFG + C+LK Q+ L I
Sbjct: 775 PPIFGADEYGYCSEWNPAMEKLTGWKREEVIGKMLVGEVFGIHRMSCQLKGQDGLTKLRI 834
Query: 820 VLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQAL 879
VLN AM+G++ EK PF FF R+GK E LL NK+ D EG +TGVFCFL + S ELQQAL
Sbjct: 835 VLNNAMAGKETEKFPFSFFDRHGKNTEALLSANKRTDAEGIITGVFCFLHVTSTELQQAL 894
Query: 880 HVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQ 939
VQR++EQ A+ RLK LAY +++IRNPL GIIF+RK+ME T+L EQK+++ TSA CQRQ
Sbjct: 895 QVQRMAEQAAMDRLKELAYIRQEIRNPLYGIIFTRKLMESTDLSEEQKQIVQTSALCQRQ 954
Query: 940 LHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSE 999
L K+LDD+DL+SI DGYL+L+ +EFTL VL A +SQ M+ S KG++++ ++ E+I +
Sbjct: 955 LVKVLDDADLESIEDGYLELDTIEFTLGTVLDAVVSQGMILSREKGLQLIRDSPEEIKTM 1014
Query: 1000 TLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
LYGD +RLQQ+L++FL ++ F + G + TK LG V++ ++E R
Sbjct: 1015 CLYGDQLRLQQILSNFLINALRFSTSEGWVGNKVVPTKRHLGSGVNVMHMEFR 1067
>sp|Q39557|PHY2_CERPU Phytochrome 2 OS=Ceratodon purpureus GN=PHY2 PE=3 SV=1
Length = 1121
Score = 1308 bits (3385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/1058 (59%), Positives = 799/1058 (75%), Gaps = 16/1058 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
MS+ + SS+ + KS+HS RV AQTT DA L A +E SG S FDYS SV G
Sbjct: 1 MSAPKKTYSSTTSAKSKHSVRV-AQTTADAALEAVYEMSGDSGDSFDYSKSV------GQ 53
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+ TAYL +Q+G LIQ FGC++A++E F VIAYSENA E L ++ AVPS+
Sbjct: 54 SAESVPAGAVTAYLQRMQRGGLIQTFGCMVAVEEPNFCVIAYSENASEFLDLMPQAVPSM 113
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G+ VLGIG+DI+T+FT S +AL+KA ++SLLNPI VHC+ SGKP YAI HR+
Sbjct: 114 GEMDVLGIGTDIRTLFTPSSGAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIG 173
Query: 178 LIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYD 237
++IDFE VK +V ++AAGALQS+KLAAKAITRLQ+LP G + LCDT+++EV ELTGYD
Sbjct: 174 IVIDFEAVKMNDVSVSAAGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYD 233
Query: 238 RVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARH 297
RVMAYKFHED+HGEVV+EI + LEPYLGLHYPATDIPQA+RFLFMKN+VR+I DC A
Sbjct: 234 RVMAYKFHEDEHGEVVAEIRRMDLEPYLGLHYPATDIPQASRFLFMKNRVRVIADCCASP 293
Query: 298 VKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQK 357
VK++QD + ++L GSTLRAPH CH QYM NM SIASLVMAV++ND EE+ + Q+
Sbjct: 294 VKLIQDPDIKQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEDSRGAI-QR 352
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
++LWGLVVCH+T+PR VPFPLR ACEFL QVF + +N E+EL Q+ EK+ILRTQTLLC
Sbjct: 353 GRKLWGLVVCHHTSPRTVPFPLRSACEFLMQVFGMQLNMEVELAAQLREKHILRTQTLLC 412
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GIV+Q+PNIMDLVKCDGAAL Y + W LG TP + Q+ DI WL EYH D
Sbjct: 413 DMLLRDAPIGIVSQTPNIMDLVKCDGAALYYGKRFWLLGTTPTENQIKDIAEWLLEYHKD 472
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DA Y GA LGD VCGMAA +I+ KD +FWFRS TA EV+WGGAKH+P E
Sbjct: 473 STGLSTDSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAE 532
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-I 596
KDDGRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR +F+D+ D DTK+ I
Sbjct: 533 KDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDID--DSDTKTMI 590
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
H++L DLK+ GM EL V +EMVRLIETAT PILAVD G++NGWN KIA +TGL V +A
Sbjct: 591 HARLNDLKLHGMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEA 650
Query: 657 IGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
+G+ + LV D S+ V+R+LYLA QG+EEQN++ ++KT G++ + + LIVNAC+SR
Sbjct: 651 MGRSLVKDLVLDESVVVVERLLYLASQGEEEQNVEIKLKTFGTQTEKEAVILIVNACSSR 710
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
D+ D+VVGVCFV QD+T QK MDKFTRI+GDYK IV+NP+PLIPPIFG DE+G+C EWN
Sbjct: 711 DVSDSVVGVCFVGQDVTGQKMFMDKFTRIQGDYKTIVKNPHPLIPPIFGGDEYGYCFEWN 770
Query: 776 PAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPF 835
PAM LTGWK +EV+ KLL+ E+FG M CCRLK+Q++ I LN AM G + +K F
Sbjct: 771 PAMEALTGWKHDEVVGKLLVGEIFGMEMMCCRLKSQDSMTKFMISLNNAMDGTNTDKFSF 830
Query: 836 GFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKA 895
F R GK+ E LL NK+ + +G +TGVFCFLQ+AS ELQQAL VQR +E+ A+ +LK
Sbjct: 831 SFCNREGKFVEALLSTNKRTNADGVITGVFCFLQIASSELQQALTVQRATEKVAIAKLKE 890
Query: 896 LAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG 955
LAY +++I+NPL GI F+R+++E T+L +QK+ L TSA C++QL K+L+D DL+SI DG
Sbjct: 891 LAYIRQEIKNPLCGITFTRQLLEDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESIEDG 950
Query: 956 YLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADF 1015
YL+L+ EF + V+ A ISQ M S KG++I+ ET +I + L+GD IRLQQVL+DF
Sbjct: 951 YLELDTAEFEMGTVMDAVISQGMTTSREKGLQIIRETPREISTMRLFGDQIRLQQVLSDF 1010
Query: 1016 LSISINFVPNG-GQLMVSSSLTKDQLGQSVHLAYLELR 1052
L +I F P+ G + + T+ +LG +VH+ +LE R
Sbjct: 1011 LINAIRFTPSSEGWVKIKVVPTRKRLGGNVHVMHLEFR 1048
>sp|Q01549|PHY1_SELMA Phytochrome 1 OS=Selaginella martensii GN=PHY1 PE=3 SV=1
Length = 1134
Score = 1298 bits (3358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/1064 (59%), Positives = 810/1064 (76%), Gaps = 20/1064 (1%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
MS+++ SS ++ KS+HS RV AQTT DAKLHA +E SG S FDYS S+ + + G
Sbjct: 1 MSTTKLTYSSGSSAKSKHSVRV-AQTTADAKLHAVYEESGESGDSFDYSKSINATKSTG- 58
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+ + TAYL +Q+G L+QPFGC+LA++E +F+VIA+S+NA E+L ++ +VPS+
Sbjct: 59 --ETIPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSL 116
Query: 118 GD--HPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT 175
G VL IG+D +T+FTA +ASAL+KA G ++S+LNPI V KTS KPFYAIVHR+
Sbjct: 117 GSGQQDVLTIGTDARTLFTA-AASALEKAAGAVDLSMLNPIWVQSKTSAKPFYAIVHRID 175
Query: 176 GSLIIDFEPVKPYEVPM-TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELT 234
L++D EPVK + + +AAGALQS+KLAAKAI+RLQSLP G + LCDT+++EV ++T
Sbjct: 176 VGLVMDLEPVKASDTRVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRDVT 235
Query: 235 GYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCR 294
GYD VMAYKFHED+HGEVV+EI +S LEPYLGLHYPATDIPQA+RFLFMKN+VRMI DC
Sbjct: 236 GYDLVMAYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCS 295
Query: 295 ARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL 354
A VK+ QD++L ++L GSTLRAPH CH QYM NM S+ASLVMA+++ND +E
Sbjct: 296 APPVKITQDKELRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAMIINDNDEPSGGGG 355
Query: 355 ---PQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILR 411
K +RLWGLVVCH+T+PR VPF LR ACEFL QVF + +N E + + EK+ILR
Sbjct: 356 GGGQHKGRRLWGLVVCHHTSPRSVPF-LRSACEFLMQVFGLQLNMEAAVAAHVREKHILR 414
Query: 412 TQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWL 471
TQTLLCDML+RDAP+GIV+QSPNIMDLVKCDGAAL Y + W LG+TP++ Q+ DI WL
Sbjct: 415 TQTLLCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPSEAQIKDIAEWL 474
Query: 472 SEYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGA 531
E+H DSTGLS DSL DAGY GA +LGD VCGMAA +I+ KD +FWFRS TA EV+WGGA
Sbjct: 475 LEHHKDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEVKWGGA 534
Query: 532 KHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDL 591
KH+PD+KDDGRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR +F+D+ D
Sbjct: 535 KHDPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDID--DS 592
Query: 592 DTKS-IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTG 650
DTK+ IH++L DLK++GM EL V +EMVRLIETAT PILAVD G +NGWN K+A++TG
Sbjct: 593 DTKTMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVADVTG 652
Query: 651 LSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIV 709
L V +A+G+ LV S D V+R+LYLALQG EEQN++ ++KT G + + + + L+V
Sbjct: 653 LPVTEAMGRSLAKELVLHESADMVERLLYLALQGDEEQNVELKLKTFGGQKDKEAVILVV 712
Query: 710 NACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFG 769
NACASRD+ DNVVGVCFV QD+T QK VMDKFTRI+GDYKAIVQNPNPLIPPIFG+DEFG
Sbjct: 713 NACASRDVSDNVVGVCFVGQDVTGQKVVMDKFTRIQGDYKAIVQNPNPLIPPIFGADEFG 772
Query: 770 WCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD 829
+C EWNPAM KL+GW+REEV+ K+L+ E+FG M CRLK Q+A IVLN A GQD
Sbjct: 773 YCSEWNPAMEKLSGWRREEVLGKMLVGEIFGIQMMYCRLKGQDAVTKFMIVLNSAADGQD 832
Query: 830 PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTA 889
EK PF FF R GKY E LL K+ D EG++TGVFCFL +AS ELQQAL VQR +E+ A
Sbjct: 833 TEKFPFAFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVA 892
Query: 890 LKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDL 949
L +LK LAY +++I+NPL GI+F+R +ME T+L +QK+ + T A C++Q+ KILDD DL
Sbjct: 893 LSKLKELAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDL 952
Query: 950 DSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
+SI DGYL+L+ EF + V+ A ISQ M+ S K ++++ ET ++I + LYGD +RLQ
Sbjct: 953 ESIEDGYLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYGDQVRLQ 1012
Query: 1010 QVLADFLSISINFVPNGGQLM-VSSSLTKDQLGQSVHLAYLELR 1052
QVLADFL +I F P+ + + + ++ +LG VH+ +LE R
Sbjct: 1013 QVLADFLLNAIRFTPSSENWVGIKVATSRKRLGGVVHVMHLEFR 1056
>sp|P36505|PHY1_PHYPA Phytochrome 1 OS=Physcomitrella patens subsp. patens GN=PHY1 PE=2
SV=1
Length = 1132
Score = 1267 bits (3278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/1041 (59%), Positives = 780/1041 (74%), Gaps = 15/1041 (1%)
Query: 18 HSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHI 74
HS RV AQTT DA L A FE SG S FDYS SV S + + P TAYL +
Sbjct: 19 HSVRV-AQTTADAALQAVFEKSGDSGDSFDYSKSV---SKSTAESLPSG--AVTAYLQRM 72
Query: 75 QKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFT 134
Q+G L Q FGC++A++ F+VIAYSENAPE+L +V AVPSVG+ L IG+D++T+FT
Sbjct: 73 QRGGLTQSFGCMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFT 132
Query: 135 APSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTA 194
A S ++L+KA E+SLLNPI V+C+ SGK YAI HR+ ++IDFE VK + ++A
Sbjct: 133 ASSVASLEKAAEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSA 192
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
AGALQS+KLAAKAITRLQ+LP G++ LCDT+++EV ELTGYDRVMAY+FHED+HGEVV+
Sbjct: 193 AGALQSHKLAAKAITRLQALPGGNIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVA 252
Query: 255 EITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCG 314
EI ++ LEPYLGLHYP TDIPQA+RFLFMKNKVR+I DC A VKV+QD L ++L G
Sbjct: 253 EIRRADLEPYLGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAG 312
Query: 315 STLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRF 374
STLR+PH CH QYM NM SIASLVMAV++ND EE+ ++ Q+ ++LWGLVVCH+T+PR
Sbjct: 313 STLRSPHGCHAQYMGNMGSIASLVMAVIINDNEEDSHGSV-QRGRKLWGLVVCHHTSPRT 371
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPN 434
VPFPLR AC FL QVF + +N E+E Q+ EK+ILRTQTLLCDML+RDAP+GIV+Q PN
Sbjct: 372 VPFPLRSACGFLMQVFGLQLNMEVESAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPN 431
Query: 435 IMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGA 494
IMDLVKCDGAAL Y W LG TP + Q+ DI WL EYH DSTGLS DSL DA Y A
Sbjct: 432 IMDLVKCDGAALYYGKPFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAA 491
Query: 495 LALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFL 554
LGD VCGMAA +I+ KD +FWFRS TA E++WGGAKH+P E DGRKMHPRSSFKAFL
Sbjct: 492 HLLGDAVCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHDPGENHDGRKMHPRSSFKAFL 551
Query: 555 EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEA 613
EVVK RSLPW+D EMDAIHSLQLILR +F+D+ D DTK+ IH++L DLK+ M EL
Sbjct: 552 EVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIA--DSDTKTMIHARLNDLKLHDMDELSV 609
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDT 672
V +EMVRLIETAT PILAVD +G++NGWN KIA++TGL V +A G+ + LV D S+
Sbjct: 610 VANEMVRLIETATAPILAVDSNGMINGWNAKIAQVTGLPVSEAHGRSLVKDLVTDESVAV 669
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
V+R+LYLAL+G+EEQN++ ++KT G++ + LIV+AC+S + +NVVGVCFV QD+T
Sbjct: 670 VERLLYLALRGEEEQNVEIKLKTFGTQTEKGVVILIVDACSSIHVSENVVGVCFVGQDVT 729
Query: 733 PQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDK 792
QK MDKFTRI+GDYK IVQNP+PLIPPIFG+DEFG+C EWNPAM LTGWK++EV+ K
Sbjct: 730 GQKMFMDKFTRIQGDYKTIVQNPHPLIPPIFGADEFGYCFEWNPAMEGLTGWKKDEVVGK 789
Query: 793 LLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVN 852
LL+ E+FG M CCR+K+Q+A I LN AM GQ +K F FF R GKY + LL N
Sbjct: 790 LLVGEIFGMQMMCCRMKSQDAMTKFMIALNTAMDGQSTDKFTFSFFDREGKYVDVLLSTN 849
Query: 853 KKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K+ + +G +TGVFCFLQ+AS ELQQAL VQR +E+ A+ +LK LAY R+I+NPL G+ F
Sbjct: 850 KRTNADGVITGVFCFLQIASSELQQALKVQRATEKVAVAKLKELAYIVREIKNPLCGLTF 909
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVA 972
+R+++E T+L +Q++ L TSA C++QL K L+D DL+SI DGYL+L+ EF + V+ A
Sbjct: 910 TRQLLEDTDLSDDQQQFLDTSAVCEQQLQKSLNDMDLESIEDGYLELDTAEFEMGTVMNA 969
Query: 973 SISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN-GGQLMV 1031
ISQ M S KG++I ET +I + L GD IRLQQVL+DFL ++ F P+ G + +
Sbjct: 970 VISQGMTTSREKGLQIFRETPREINTMRLLGDQIRLQQVLSDFLLNTVRFTPSPEGWVKI 1029
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
T+ +LG SVH+ +LE R
Sbjct: 1030 KVVPTRKRLGGSVHVVHLEFR 1050
>sp|Q10CQ8|PHYC_ORYSJ Phytochrome C OS=Oryza sativa subsp. japonica GN=PHYC PE=2 SV=1
Length = 1137
Score = 1248 bits (3228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/1060 (56%), Positives = 792/1060 (74%), Gaps = 15/1060 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++R S S++ +S+HSARV+AQT +DA+LHA+FE S FDYS+SV ++ +G
Sbjct: 6 SNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVGAANRSGA---- 61
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+ +AYL ++Q+G+ +QPFGCLLA+ +TF ++AYSENA E+L + HAVP++
Sbjct: 62 -TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQRE 120
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L +G+D++T+F + S ALQKA FG+V+LLNPILVH +TSGKPFYAI+HR+ L+ID
Sbjct: 121 ALAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVID 180
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P ++P+TA GA++SYKLAA+AI RLQSLPSG++ LCD +++EV ELTGYDRVMA
Sbjct: 181 LEPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 240
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++
Sbjct: 241 YKFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKII 300
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQK 357
QD+ L +++CGSTLRAPH CH QYM +M S+ASLVM+V +N++E++ +T P+
Sbjct: 301 QDDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKG 360
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK LWGL+VCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLC
Sbjct: 361 RK-LWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLC 419
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GI TQSPN+MDLVKCDGAAL Y+N++W LG TP++ ++ +IV+WL EYH
Sbjct: 420 DMLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDG 479
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-D 536
STGLS DSL +AGY GA ALGDVVCGMAA++IS KD IFWFRS TA E++WGGAKHEP D
Sbjct: 480 STGLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPID 539
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDV-GTLDLDTKS 595
D+GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D + + KS
Sbjct: 540 ADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKS 599
Query: 596 IHSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
I + D KI+G+ EL VT+EMVRLIETAT PILAVD+ G +NGWN K AELTGL V
Sbjct: 600 IVTAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPV 659
Query: 654 DKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
+AIGK + LV D S++ VK++L ALQG EEQN+Q ++KT + N+ P+ L+VNAC
Sbjct: 660 MEAIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACC 719
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
SRDL + VVGVCFVAQD+T Q +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C E
Sbjct: 720 SRDLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLE 779
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM K+TG KRE+ +DKLL+ EVF + CR+K+ L I++N +SGQDPEK+
Sbjct: 780 WNEAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKL 839
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
FGFF +GKY E L+ K+ D EG +TG CFL +AS ELQ AL VQ++SEQ A+
Sbjct: 840 LFGFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSF 899
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K L Y ++++RNPL+G+ F+R ++E ++L EQ++LL ++ CQ QL KIL D+DL+SI
Sbjct: 900 KELTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIE 959
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
Y ++ V+F L E L + Q M +S K I I + ++ L GD++RLQQVLA
Sbjct: 960 QCYTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGDNLRLQQVLA 1019
Query: 1014 DFLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
DFL+ + F P G +++ + +G + +A+LE R
Sbjct: 1020 DFLACMLQFTQPAEGPIVLQVIPRMENIGSGMQIAHLEFR 1059
>sp|A2XM23|PHYC_ORYSI Phytochrome C OS=Oryza sativa subsp. indica GN=PHYC PE=2 SV=2
Length = 1137
Score = 1243 bits (3217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/1060 (56%), Positives = 791/1060 (74%), Gaps = 15/1060 (1%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQP 61
S++R S S++ +S+HSARV+AQT +DA+LHA+FE S FDYS+SV ++ +G
Sbjct: 6 SNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVGAANRSGA---- 61
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
+ +AYL ++Q+G+ +QPFGCLLA+ +TF ++AYSENA E+L + HAVP++
Sbjct: 62 -TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQRE 120
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
L +G+D++T+F + S ALQKA FG+V+LLNPILVH +TSGKPFYAI+HR+ L+ID
Sbjct: 121 ALAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVID 180
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EPV P ++P+TA GA++SYKLAA+AI RLQSLPSG++ LCD +++EV ELTGYDRVMA
Sbjct: 181 LEPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 240
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEV++E +S LEPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++
Sbjct: 241 YKFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKII 300
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTL----PQK 357
QD+ L +++CGSTLRAPH CH QYM +M S+ASLVM+V +N++E++ +T P+
Sbjct: 301 QDDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKG 360
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RK LWGL+VCH+T+PRFVPFPLRYACEFL QVF I +NKE+EL Q E++ILRTQTLLC
Sbjct: 361 RK-LWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLC 419
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RDAP+GI TQSPN+MDLVKCDGAAL Y+N++W LG TP++ ++ +IV+WL EYH
Sbjct: 420 DMLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDG 479
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-D 536
STGLS DSL +AGY GA ALGDVV GMAA++IS KD IFWFRS TA E++WGGAKHEP D
Sbjct: 480 STGLSTDSLVEAGYPGAAALGDVVYGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPID 539
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDV-GTLDLDTKS 595
D+GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D + + KS
Sbjct: 540 ADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKS 599
Query: 596 IHSKLCD--LKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSV 653
I + D KI+G+ EL VT+EMVRLIETAT PILAVD+ G +NGWN K AELTGL V
Sbjct: 600 IVTAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPV 659
Query: 654 DKAIGKHFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
+AIGK + LV D S++ VK++L ALQG EEQN+Q ++KT + N+ P+ L+VNAC
Sbjct: 660 MEAIGKPLVDLVIDDSVEVVKQILNSALQGIEEQNLQIKLKTFNHQENNGPVILMVNACC 719
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
SRDL + VVGVCFVAQD+T Q +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C E
Sbjct: 720 SRDLSEKVVGVCFVAQDMTGQNIIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLE 779
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM K+TG KRE+ +DKLL+ EVF + CR+K+ L I++N +SGQDPEK+
Sbjct: 780 WNEAMQKITGIKREDAVDKLLIGEVFTHHEYGCRVKDHGTLTKLSILMNTVISGQDPEKL 839
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
FGFF +GKY E L+ K+ D EG +TG CFL +AS ELQ AL VQ++SEQ A+
Sbjct: 840 LFGFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSF 899
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K L Y ++++RNPL+G+ F+R ++E ++L EQ++LL ++ CQ QL KIL D+DL+SI
Sbjct: 900 KELTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESIE 959
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
Y ++ V+F L E L + Q M +S K I I + ++ L GD++RLQQVLA
Sbjct: 960 QCYTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGDNLRLQQVLA 1019
Query: 1014 DFLSISINFV-PNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
DFL+ + F P G +++ + +G + +A+LE R
Sbjct: 1020 DFLACMLQFTQPAEGPIVLQVIPRMENIGSGMQIAHLEFR 1059
>sp|Q41046|PHY_PINSY Phytochrome OS=Pinus sylvestris PE=2 SV=1
Length = 1131
Score = 1213 bits (3139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/1041 (56%), Positives = 767/1041 (73%), Gaps = 21/1041 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
A +AQ DA+L FE SG SFDY+ S++V + A +QQ TAYL IQ+
Sbjct: 31 ATAMAQYNSDARLLQVFEQSGESGKSFDYTRSIQVHNRAVPEQQ------ITAYLSRIQR 84
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG--DHPVLGIGSDIKTIFT 134
G IQPFGC+LA++E TF++IAYSEN E+L + +VPS+ VL IG+D++T+FT
Sbjct: 85 GGRIQPFGCVLAVEETTFRIIAYSENE-EMLDLGAQSVPSMEKPQQDVLTIGTDVRTLFT 143
Query: 135 APSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTA 194
A SA +L+KA E+SL+NPI VHCK S KPFYAIVHR+ ++ID EP++ + M+A
Sbjct: 144 AASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSA 203
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
AGA+QS KLA +AI+RLQSLP G + LCDT+++ V ELTGYDRVM YKFHED+HGEVV+
Sbjct: 204 AGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVA 263
Query: 255 EITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCG 314
EI +S LEPYLGLHYPATDIPQA+RFLFM+N+VRMI DC A VKV+Q E+L L L G
Sbjct: 264 EIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVG 323
Query: 315 STLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRF 374
ST APH CH QYM NM SI SL+MAV++N ++EG + + +LWGLVVCH+T+PR
Sbjct: 324 STPSAPHGCHAQYMANMGSIRSLLMAVIINGNDDEGGGS-GRNSMKLWGLVVCHHTSPRA 382
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPN 434
VPFPLRYACEFL Q + +N EL+L Q+ EK+ILRTQTLLCDML+RDAP+GIVTQSP+
Sbjct: 383 VPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPS 442
Query: 435 IMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGA 494
I DLVKCDGAAL Y W LGVTP + Q+ DI WL E+H DSTGLS DSL DAGY GA
Sbjct: 443 IKDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGA 502
Query: 495 LALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFL 554
+LGD VCGMA+ RI+ KD +FWFRS TA E++WGGAKH PD+KDD R+MHPRSSFKAFL
Sbjct: 503 ASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFL 562
Query: 555 EVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEA 613
EVVK RSLPW + E+DAIHSLQLILR +F+D+ D TK+ +HS+L L+++G+ EL +
Sbjct: 563 EVVKRRSLPWDNVEIDAIHSLQLILRCSFRDID--DSGTKTMVHSRLNYLRLQGIDELSS 620
Query: 614 VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDT 672
V SEMVRLIETAT PILAVD +GLVNGWN K+AELTGL V +A+G + LV + S++
Sbjct: 621 VASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEQSVER 680
Query: 673 VKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDIT 732
V++ML+ AL+G+EE+N++ +KT G + + + L+VNAC+SRD DN+VGVCFV QD+T
Sbjct: 681 VEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNIVGVCFVGQDVT 740
Query: 733 PQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDK 792
QK VMDKF RI+GDY++IVQ+PNPLIPPIF SDE+ C EWN AM K+TGW +EVI K
Sbjct: 741 SQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCSEWNAAMEKVTGWTHDEVIGK 800
Query: 793 LLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVN 852
+L+ E+FG CCRLK Q+A IVL++ GQ+ EK PF FF + GKY E LL N
Sbjct: 801 MLVGEIFG---GCCRLKGQDAVTKFTIVLHQCNHGQEIEKFPFAFFDKQGKYVEALLTAN 857
Query: 853 KKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIF 912
K+ D +G +TG FCF ++AS ELQ AL VQR E+ RLK LAY +++I+NPL G++F
Sbjct: 858 KRTDADGRITGSFCFFRIASSELQHALEVQRQQEKKCFARLKELAYIRQEIKNPLYGMMF 917
Query: 913 SRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVA 972
+RK++E T+L +QK+ + TSA C+RQ+ K++DD DL+S+ DGY++L+ EF L V+ A
Sbjct: 918 TRKLLEETDLSDDQKQFVETSAVCERQMQKVMDDMDLESLEDGYMELDTAEFILGTVIDA 977
Query: 973 SISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN-GGQLMV 1031
+SQ M+ KG++++ E ++ + LYGD +++QQ+LADFL + F P+ G + +
Sbjct: 978 VVSQGMIVLREKGLQLIREIPGEVKTMRLYGDEVKIQQILADFLLNVLRFTPSPEGWVAI 1037
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
T QLG +H+ +LE R
Sbjct: 1038 KVFPTLKQLGGGLHVVHLEFR 1058
>sp|P42496|PHY_ADICA Phytochrome 1 OS=Adiantum capillus-veneris GN=PHY1 PE=2 SV=2
Length = 1118
Score = 1207 bits (3124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/1041 (56%), Positives = 767/1041 (73%), Gaps = 24/1041 (2%)
Query: 21 RVIAQTTIDAKLHADFETSGTS--FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGK 78
R IAQT+ DAKL+A +E S S FDYS SV +AG ++ S ++ TAYL +Q+G
Sbjct: 20 RRIAQTSADAKLYAAYEESSESGSFDYSQSV----SAG--KEGISSQLVTAYLQRMQRGG 73
Query: 79 LIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSA 138
L+Q FGCL+A++E+TF+V+AY NAPE+L + AVP++G + L IG+D++T+ + SA
Sbjct: 74 LVQQFGCLIAVEEETFRVLAYGANAPEMLDVATQAVPTMGQYSRLCIGADVRTLLSPASA 133
Query: 139 SALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGAL 198
SAL + +G +VS+ NPI V ++SGKPFYAI+HR L+ID EP++P + +T GAL
Sbjct: 134 SALDRVIGVVDVSMFNPITVQSRSSGKPFYAILHRNDVGLVIDLEPIRPDDASITG-GAL 192
Query: 199 QSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITK 258
QS+KLAAKAI RLQSLP G + LCD++++EV ELTG+DRVMAYKFHED+HGEVV+EI +
Sbjct: 193 QSHKLAAKAIARLQSLPGGDIGLLCDSVVEEVHELTGFDRVMAYKFHEDEHGEVVAEIRR 252
Query: 259 SGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLR 318
+ LEPY+GLHYPATDIPQAARFLFMKN+VRMI DCR VK++QD+ L ++L GS LR
Sbjct: 253 TDLEPYIGLHYPATDIPQAARFLFMKNRVRMICDCRLPPVKLIQDKTLSQPMSLTGSKLR 312
Query: 319 APHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFP 378
APH CH QYM NMNSI+SLVMAV+VND +++ Q K LWGLVVCH+T+PR+VPFP
Sbjct: 313 APHGCHTQYMANMNSISSLVMAVIVNDSDDDSPGHSSQGIK-LWGLVVCHHTSPRYVPFP 371
Query: 379 LRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDL 438
+R ACEFL QVF++ +N E+ + Q+ EK+ILRTQTLLCDML+RDAP+GIV+QSPNIMDL
Sbjct: 372 VRSACEFLMQVFSLQLNMEVGMAAQVREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDL 431
Query: 439 VKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALG 498
V CDGAAL Y K W LG TP + Q+ DI +WL + H DSTGLS DSL GY A LG
Sbjct: 432 VTCDGAALYYGKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLG 491
Query: 499 DVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVK 558
D VCG+AA +I+ D +FWFRS TA EVRWGGA+H+P+E+DDGR+MHPRSSFKAFLEVVK
Sbjct: 492 DAVCGLAAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVK 551
Query: 559 TRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS-IHSKLCDLKIEGMKELEAVTSE 617
+SLPW+D EMDAIHSLQLILR +F+D+ D +TK+ IH++L DLK++G+ EL V SE
Sbjct: 552 QQSLPWEDVEMDAIHSLQLILRGSFQDID--DSNTKTMIHARLNDLKLQGLDELSTVASE 609
Query: 618 MVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRM 676
MVRLIETAT PILAVD GL+NGWN K+AELTGLS + A+GK LV + S V+R+
Sbjct: 610 MVRLIETATAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERV 669
Query: 677 LYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKT 736
L+LAL+G+EEQ+I+ ++T+ + LIVN C SRD+ +NVVGVCFV QD+T QK
Sbjct: 670 LHLALEGEEEQDIEIHLRTYDQHKQKGVVILIVNTCCSRDVSNNVVGVCFVGQDVTGQKL 729
Query: 737 VMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLA 796
V+D+F RI+GDYKAIVQ+ NPLIPPIFG+DE+G+C EWN AM KL+ W+REEV+ K+L+
Sbjct: 730 VLDRFIRIQGDYKAIVQSLNPLIPPIFGADEYGFCSEWNAAMEKLSNWRREEVLGKMLVG 789
Query: 797 EVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLD 856
E+FG M CCRL+ Q+ L IVLN A++GQ+ EK P F+ RNG+ E LL +K+ D
Sbjct: 790 EIFGLQMVCCRLQGQDVVTKLMIVLNDAVNGQESEKFPLVFYDRNGRRVEALLIASKRTD 849
Query: 857 REGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKM 916
+G +TGVFCFL AS EL QAL ++R E+ K L+Y K +++ PL G+ F+R +
Sbjct: 850 ADGRITGVFCFLHTASPELLQALIIKRAKEKVD----KELSYVKEELKKPLEGLAFTRTV 905
Query: 917 MEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQ 976
+EGT L EQ++L+ T+A C+RQL KIL+D DL++I +GY+DLEM EF + V+ A ISQ
Sbjct: 906 LEGTNLTIEQRQLIKTNAWCERQLRKILED-DLNNIEEGYMDLEMSEFFMGSVIDAVISQ 964
Query: 977 VMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQ-----LMV 1031
M S KG++I+ E + L+GD RLQQVLAD L +IN + + +
Sbjct: 965 GMAASRGKGVQILTEIPNDVKLMCLFGDQARLQQVLADLLFCAINHATTTNEDEKDWVTI 1024
Query: 1032 SSSLTKDQLGQSVHLAYLELR 1052
S TK +L VHL + E R
Sbjct: 1025 KVSRTKTRLDDGVHLMHFEFR 1045
>sp|P93528|PHYC_SORBI Phytochrome C OS=Sorghum bicolor GN=PHYC PE=2 SV=1
Length = 1135
Score = 1196 bits (3095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/1039 (57%), Positives = 764/1039 (73%), Gaps = 14/1039 (1%)
Query: 22 VIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKLIQ 81
V+AQT +DA+LHA+FE+S +FDYS+SV + + S + Y +Q+G IQ
Sbjct: 25 VVAQTPVDAQLHAEFESSQRNFDYSSSV-----SAAIRPSVSTSTVSTYHQTMQRGLYIQ 79
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSASAL 141
PFGCLLA+ TF ++AYSENAPE+L + HAVP++ L +G+D++T+F + S+ AL
Sbjct: 80 PFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRDALAVGADVRTLFRSQSSVAL 139
Query: 142 QKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201
KA FGEV+LLNPILVH +TSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SY
Sbjct: 140 HKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPVDVPVTAAGALKSY 199
Query: 202 KLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKSGL 261
KLAAKAI+RLQSLPSG++ LCD +++EV ELTGYDRVMAYKFHED+HGEV+SE +S L
Sbjct: 200 KLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVISECRRSDL 259
Query: 262 EPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH 321
EPYLGLHYPATDIPQA+RFLFMKNKVRMI DC A VK++QD+ L L+LCGSTLRA H
Sbjct: 260 EPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKIIQDDSLAQPLSLCGSTLRASH 319
Query: 322 SCHLQYMENMNSIASLVMAVVVNDEEEE----GDNTLPQKRKRLWGLVVCHNTTPRFVPF 377
CH QYM NM S+ASLVM+V ++++EEE G + P+ RK LWGLVVCH+T+PRFVPF
Sbjct: 320 GCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKGRK-LWGLVVCHHTSPRFVPF 378
Query: 378 PLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMD 437
PLRYACEFL QVF I +NKE+EL Q E++ILRTQTLL DML+RDAP+GI TQSPN+MD
Sbjct: 379 PLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLWDMLLRDAPVGIFTQSPNVMD 438
Query: 438 LVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALAL 497
LVKCDG AL Y+N++ LG TP++ ++ I +WL E H STGLS DSL +AGY GA AL
Sbjct: 439 LVKCDGVALYYQNQLLLLGSTPSESEIKSIATWLQENHDGSTGLSTDSLVEAGYPGAAAL 498
Query: 498 GDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEP-DEKDDGRKMHPRSSFKAFLEV 556
+VVCGMAA++IS KD IFWFRS T E++WGGAKHEP D D+GRKMHPRSSFKAFLEV
Sbjct: 499 REVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDADDNGRKMHPRSSFKAFLEV 558
Query: 557 VKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCD--LKIEGMKELEAV 614
VK RS+PW+D EMDAIHSLQLILR + +D + +SI D KI+G+ EL V
Sbjct: 559 VKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIVKAPPDDTKKIQGLLELRTV 618
Query: 615 TSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDSSIDTVK 674
T+EMVRLIETAT P+LAVD+ G +NGWN K AELTGL V +AIG+ + LV SI+ VK
Sbjct: 619 TNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVMEAIGRPLIDLVVVDSIEVVK 678
Query: 675 RMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQ 734
R+L ALQG EEQN++ ++K + + PI L+VN+C SRDL + V+GVCFV QD+T Q
Sbjct: 679 RILDSALQGIEEQNLEIKLKAFHEQECNGPIILMVNSCCSRDLSEKVIGVCFVGQDLTTQ 738
Query: 735 KTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLL 794
K +MDK+TRI+GDY AIV+NP+ LIPPIF ++ G C EWN AM K+TG +RE+VIDKLL
Sbjct: 739 KMIMDKYTRIQGDYVAIVKNPSELIPPIFMINDLGSCLEWNKAMQKITGIQREDVIDKLL 798
Query: 795 LAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKK 854
+ EVF + CR+K+ L I++N +SGQDPEK+ FGFF +GKY E LL VNK+
Sbjct: 799 IGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFGFFDTDGKYIESLLTVNKR 858
Query: 855 LDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSR 914
++ EG +TG CFL +AS ELQ AL VQ++SEQ A K L Y +++RNPL+G+ F+
Sbjct: 859 INAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFKELTYIHQELRNPLNGMQFTC 918
Query: 915 KMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASI 974
++E +EL EQ++LL ++ CQ QL KIL D+DL+SI Y+++ VEF L E L +
Sbjct: 919 NLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESIEQCYMEMNTVEFNLEEALNTVL 978
Query: 975 SQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV-PNGGQLMVSS 1033
Q + K I I + +I LYGD++RLQQVLAD+L+ ++ F P G +++
Sbjct: 979 MQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVLADYLACALQFTQPAEGPIVLQV 1038
Query: 1034 SLTKDQLGQSVHLAYLELR 1052
K+ +G + +A+LE R
Sbjct: 1039 IPKKENIGSGMQIAHLEFR 1057
>sp|P34094|PHYB_SOLTU Phytochrome B OS=Solanum tuberosum GN=PHYB PE=3 SV=2
Length = 1130
Score = 1184 bits (3063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 576/1053 (54%), Positives = 768/1053 (72%), Gaps = 26/1053 (2%)
Query: 10 SSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRV 66
+SN ++ IAQ T DA+LHA FE SG S FDYS SV+ ++ Q +R
Sbjct: 22 TSNVNYKDSISKAIAQYTADARLHAVFEQSGESGKFFDYSQSVKTTT------QSVPERQ 75
Query: 67 TTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIG 126
TAYL IQ+G IQPFGC++A+DE +F+VIAYSENA E+L++ +VPS+ +L IG
Sbjct: 76 ITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEMLSLTPQSVPSLEKCEILTIG 135
Query: 127 SDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVK 186
+D++T+FT S+ L++A G E++LLNPI +H K SGKPFYAI+HRV ++ID EP +
Sbjct: 136 TDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVIDLEPAR 195
Query: 187 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHE 246
+ ++ AGA+QS KLA +AI+ LQSLP G ++ LCDT+++ V ELTGYDRVM YKFHE
Sbjct: 196 TEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHE 255
Query: 247 DDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKL 306
D+HGEVV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V QDE L
Sbjct: 256 DEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVTQDESL 315
Query: 307 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE----GDNTLPQKRKRLW 362
L L GSTLRAPH CH QYM NM SIASL +AV++N +EE G N++ RLW
Sbjct: 316 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGGRNSM-----RLW 370
Query: 363 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMR 422
GLVV H+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++LRTQTLLCDML+R
Sbjct: 371 GLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR 430
Query: 423 DAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
D+P GIVTQSP+IMDLVKCDGAAL Y+ K + LGVTP + Q+ DIV WL YH DSTGLS
Sbjct: 431 DSPPGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEWLLAYHGDSTGLS 490
Query: 483 ADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGR 542
DSL DAGY GA +LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDDG+
Sbjct: 491 TDSLPDAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ 550
Query: 543 KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI-HSKLC 601
+MHPRSSFKAFLEVVK+RS PW++ EMDAIHSLQLILR++FKD ++K+I H+ L
Sbjct: 551 RMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEA--SNSKAIVHAHLG 608
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
+++++G+ EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELTG+SV++A+GK
Sbjct: 609 EMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGVSVEEAMGKSL 668
Query: 662 L-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ LV S +T +++LY AL+G+E++N++ +++T G++ + + ++VNACAS+D +N
Sbjct: 669 VHDLVYKESQETAEKLLYNALRGEEDKNVEIKLRTFGAEQLEKAVFVVVNACASKDYTNN 728
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVK 780
+VGVCFV QD+T +K VMDKF I+GDYKAIV +PNPLIPPIF SDE C EWN AM K
Sbjct: 729 IVGVCFVGQDVTGEKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEK 788
Query: 781 LTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFAR 840
LTGW R E++ K+L+ E+FG+ CCRLK +A IVL+ A+ GQD +K PF FF R
Sbjct: 789 LTGWSRGEIVGKMLVGEIFGS---CCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDR 845
Query: 841 NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK 900
NGKY + LL NK+++ EG G FCF+Q+AS ELQQAL VQR E+ ++K LAY
Sbjct: 846 NGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYIC 905
Query: 901 RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLE 960
++I++PL+GI F+ ++E T L QK+ L TSA C+RQ+ KI+ D DL++I DG L LE
Sbjct: 906 QEIKSPLNGIRFTNSLLEATNLTENQKQYLETSAACERQMSKIIRDIDLENIEDGSLTLE 965
Query: 961 MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI 1020
+F L V+ A +SQVM+ KG++++ + E+I + T++GD +R+QQVLADFL +
Sbjct: 966 KEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMV 1025
Query: 1021 NFVPN-GGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+ P+ G + + + + V + ++ELR
Sbjct: 1026 RYAPSPDGWVEIQLRPSMMPISDGVTVVHIELR 1058
>sp|Q9ZS62|PHYB1_SOLLC Phytochrome B1 OS=Solanum lycopersicum GN=PHYB1 PE=2 SV=1
Length = 1131
Score = 1172 bits (3032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/1034 (54%), Positives = 753/1034 (72%), Gaps = 26/1034 (2%)
Query: 2 SSSRPAQSS--SNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAG 56
SS AQSS SN ++ IAQ T DA+LHA FE SG SFDYS SV+ ++
Sbjct: 14 SSQGQAQSSGTSNMNYKDSISKAIAQYTADARLHAVFEQSGESGKSFDYSQSVKTTT--- 70
Query: 57 GDQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPS 116
Q +R TAYL IQ+G IQPFGC++A+DE +F++IAYSENA E+L++ +VPS
Sbjct: 71 ---QSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRIIAYSENACEMLSLTPQSVPS 127
Query: 117 VGDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTG 176
+ +L +G+D++T+FT S+ L++A G E++LLNPI +H K SGKPFYAI+HRV
Sbjct: 128 LDKSEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDV 187
Query: 177 SLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGY 236
++ID EP + + ++ AGA+QS KLA +AI+ LQSLP G ++ LCDT+++ V ELTGY
Sbjct: 188 GIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGY 247
Query: 237 DRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAR 296
DRVM YKFHED+HGEVV+E +S LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A
Sbjct: 248 DRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHAT 307
Query: 297 HVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEE----GDN 352
V+V QDE L L L GSTLRAPH CH QYM NM SIASL +AV++N +EE G N
Sbjct: 308 PVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGGRN 367
Query: 353 TLPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRT 412
++ RLWGLVV H+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++LRT
Sbjct: 368 SM-----RLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRT 422
Query: 413 QTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLS 472
QTLLCDML+RD+P GIVTQSP+IMDLVKCDGAAL Y+ K + LGVTP + Q+ DIV WL
Sbjct: 423 QTLLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQRKYYPLGVTPTEAQIKDIVEWLL 482
Query: 473 EYHMDSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
YH DSTGLS DSL DAGY GA +LGD VCGMA I+ KD +FWFRS TA E++WGGAK
Sbjct: 483 AYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAK 542
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD 592
H P++KDDG++MHPRSSFKAFLEVVK+RS PW++ EMDAIHSLQLILR++FKD +
Sbjct: 543 HHPEDKDDGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEA--SN 600
Query: 593 TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLS 652
+K+I L +++++G+ EL +V EMVRLIETAT PI VDV+G +NGWN K+ ELTGLS
Sbjct: 601 SKAIVHALGEMELQGIDELSSVAREMVRLIETATAPIFGVDVNGRINGWNEKVVELTGLS 660
Query: 653 VDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNA 711
++A GK + L+ S ++ +++LY AL+G E +N++ +++T G++ + + L+VNA
Sbjct: 661 AEEAKGKSLVHDLLYKESQESAEKLLYNALRGVEGKNVEIKLRTFGAEQVEKAVFLVVNA 720
Query: 712 CASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWC 771
C+SRD +++VGV FV QD+T +K VMDKF I+GDYKAIV +PNPLIPPIF SDE C
Sbjct: 721 CSSRDYTNSIVGVSFVGQDVTGEKIVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTSC 780
Query: 772 CEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPE 831
EWN AM KL+GW REE++ K+L+ E+FG+ CCRLK +A IVL+ A+ GQD +
Sbjct: 781 SEWNTAMEKLSGWSREEIVGKMLVGEIFGS---CCRLKGPDAMTKFMIVLHNAIGGQDTD 837
Query: 832 KVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALK 891
K PF FF RNGKY + LL NK+++ EG G FCF+Q+AS ELQQAL VQR E+
Sbjct: 838 KFPFSFFDRNGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKCYS 897
Query: 892 RLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDS 951
++K LAY +++++PL+GI F+ ++E T L QK+ L TSA C+RQ+ KI+ D DL++
Sbjct: 898 QMKELAYICQEVKSPLNGIRFTNSLLEATNLTEYQKQYLETSAACERQMSKIIRDVDLEN 957
Query: 952 IIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQV 1011
I DG L LE +F L V+ A +SQVM+ KG++++ + E+I + T++GD +R+QQV
Sbjct: 958 IEDGSLTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQQV 1017
Query: 1012 LADFLSISINFVPN 1025
LADFL + + P+
Sbjct: 1018 LADFLLNMVRYAPS 1031
>sp|P29130|PHYB_TOBAC Phytochrome B OS=Nicotiana tabacum GN=PHYB PE=2 SV=2
Length = 1132
Score = 1165 bits (3013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/1053 (53%), Positives = 758/1053 (71%), Gaps = 19/1053 (1%)
Query: 7 AQSS--SNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQP 61
AQSS SN ++ IAQ T DA+LHA FE SG SFDYS S++ ++ Q
Sbjct: 20 AQSSGTSNVNYKDSISKAIAQYTADARLHAVFEQSGESGKSFDYSQSIKTTT-----QSV 74
Query: 62 RSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP 121
++ TAYL IQ+G IQPFGC++A+DE +F+VIAYSENA E+L++ +VPS+
Sbjct: 75 VPEQQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEMLSLTPQSVPSLERPE 134
Query: 122 VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
+L +G+D++T+FT S+ L++A G E++LLNPI +H K SGKPFYAI+HRV ++ID
Sbjct: 135 ILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVID 194
Query: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMA 241
EP + + ++ AGA+QS KLA +AI+ LQSLP G ++ LCDT+++ V ELTGYDRVM
Sbjct: 195 LEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKLLCDTVVESVRELTGYDRVMV 254
Query: 242 YKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL 301
YKFHED+HGEVV+E LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+V+
Sbjct: 255 YKFHEDEHGEVVAESKIPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVV 314
Query: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRL 361
QDE L L L GSTLRAPH CH QYM NM SIASL +AV++N +EE + RL
Sbjct: 315 QDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGG--RSSMRL 372
Query: 362 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLM 421
WGLVV H+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK++LRTQTLLCDML+
Sbjct: 373 WGLVVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLL 432
Query: 422 RDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGL 481
RD+P GIV QSP+IMDLVKCDGAAL + K + LGVTP + Q+ DIV WL YH DSTGL
Sbjct: 433 RDSPTGIVIQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGL 492
Query: 482 SADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
S DSL DAGY GA LGD VCGMA I+ KD +FWFRS TA E++WGGAKH P++KDDG
Sbjct: 493 STDSLADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDG 552
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLC 601
++MHPRSSFKAFLEVVK+RSLPW++ EMDAIHSL LILR++FKD + +H++L
Sbjct: 553 QRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSL-LILRDSFKDAEASN-SKAVVHAQLG 610
Query: 602 DLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHF 661
+++++G+ EL +V EMVRLIETAT PI AVDV+G +NGWN K+AELT LSV++A+GK
Sbjct: 611 EMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTDLSVEEAMGKSL 670
Query: 662 L-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN 720
+ LV S +T +++L+ AL+G+E++N++ +++T G + + ++VNAC+S+D +N
Sbjct: 671 VHDLVHKESQETAEKLLFNALRGEEDKNVEIKLRTFGPEQLKKAVFVVVNACSSKDYTNN 730
Query: 721 VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVK 780
+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF SDE C EWN AM K
Sbjct: 731 IVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEK 790
Query: 781 LTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFAR 840
LTGW R E+I K+L+ E+FG+ CCRLK +A IVL+ A+ QD +K PF FF R
Sbjct: 791 LTGWSRGEIIGKMLVGEIFGS---CCRLKGPDAMTKFMIVLHNAIGVQDTDKFPFSFFDR 847
Query: 841 NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK 900
NGKY + LL NK+++ EG + G FCF+Q+AS ELQQAL VQR E+ ++K LAY
Sbjct: 848 NGKYVQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQEKKCYSQMKELAYLC 907
Query: 901 RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLE 960
++I++PL+GI F+ ++E T+L QK+ L TSA C+RQ+ KI+ D DL++I DG L LE
Sbjct: 908 QEIKSPLNGIRFTNSLLEATDLTENQKQYLETSAACERQMSKIIRDVDLENIEDGSLTLE 967
Query: 961 MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI 1020
EF L V+ A +SQVM+ + ++++ + E+I + T++GD +R+QQVLADFL +
Sbjct: 968 KEEFFLGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGDQVRIQQVLADFLLNMV 1027
Query: 1021 NFVPN-GGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+ P+ G + + Q+ V + ++E R
Sbjct: 1028 RYAPSPDGWVEIQLQPNMKQISDEVTVVHIEFR 1060
>sp|A2XFW2|PHYB_ORYSI Phytochrome B OS=Oryza sativa subsp. indica GN=PHYB PE=3 SV=2
Length = 1171
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>sp|Q10MG9|PHYB_ORYSJ Phytochrome B OS=Oryza sativa subsp. japonica GN=PHYB PE=2 SV=1
Length = 1171
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1021 (54%), Positives = 734/1021 (71%), Gaps = 26/1021 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDY+ S+R S T +QQ AYL IQ+
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSSEQQ------IAAYLSRIQR 112
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH---PVLGIGSDIKT 131
G IQPFGC LA+ D+ +F+++AYSEN +LL + +H+VPS+ P + +G+D +
Sbjct: 113 GGHIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARL 172
Query: 132 IFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVP 191
+F SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + +
Sbjct: 173 LFAPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPA 232
Query: 192 MTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGE 251
++ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGE
Sbjct: 233 LSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGE 292
Query: 252 VVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLT 311
VV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD L L
Sbjct: 293 VVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLC 352
Query: 312 LCGSTLRAPHSCHLQYMENMNSIASLVMAVVV----NDEEEEGDNTLPQKRKRLWGLVVC 367
L GSTLR+PH CH QYM NM SIASLVMAV++ +D+ ++P K LWGLVVC
Sbjct: 353 LVGSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDDDHNISRGSIPSAMK-LWGLVVC 411
Query: 368 HNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
H+T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P G
Sbjct: 412 HHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTG 471
Query: 428 IVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLY 487
IVTQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL
Sbjct: 472 IVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLA 531
Query: 488 DAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPR 547
DAGY GA ALGD V GMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPR
Sbjct: 532 DAGYPGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPR 591
Query: 548 SSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLK 604
SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L+
Sbjct: 592 SSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELE 651
Query: 605 IEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT- 663
+ G+ EL +V EMVRLIETATVPI AVD DG +NGWN K+AELTGLSV++A+GK +
Sbjct: 652 LRGIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVND 711
Query: 664 LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVG 723
L+ S +TV ++L AL+G E++N++ ++KT G + + PI +IVNAC+SRD N+VG
Sbjct: 712 LIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVG 771
Query: 724 VCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTG 783
VCFV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTG
Sbjct: 772 VCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTG 831
Query: 784 WKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGK 843
W R EV+ KLL+ EVFG CCRLK +A IVL+ A+ GQD EK PF FF +NGK
Sbjct: 832 WSRGEVVGKLLVGEVFGN---CCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGK 888
Query: 844 YAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQI 903
Y + LL N + +G G FCFLQ+AS ELQQA +QR E+ R+K LAY ++I
Sbjct: 889 YVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARMKELAYIYQEI 948
Query: 904 RNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVE 963
+NPL+GI F+ ++E T+L +Q++ L TS C++Q+ KI+ D+ L SI DG L LE E
Sbjct: 949 KNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIEDGSLVLEKGE 1008
Query: 964 FTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFV 1023
F+L V+ A +SQVM++ + ++++ + ++I + YGD R+QQVL DFL + F
Sbjct: 1009 FSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQVLCDFLLSMVRFA 1068
Query: 1024 P 1024
P
Sbjct: 1069 P 1069
>sp|P93527|PHYB_SORBI Phytochrome B OS=Sorghum bicolor GN=PHYB PE=3 SV=2
Length = 1178
Score = 1150 bits (2975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1020 (54%), Positives = 737/1020 (72%), Gaps = 24/1020 (2%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ +AQ T+DA+LHA FE SG S FDYS S+R T P S++ AYL IQ+
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPT------PSSEQQIAAYLSRIQR 121
Query: 77 GKLIQPFGCLLAL-DEKTFKVIAYSENAPELLTMV-NHAVPSVGDH--PVLGIGSDIKTI 132
G IQPFGC LA+ D+ +F+++A+SENA +LL + +H+VPS+ P + +G+D + +
Sbjct: 122 GGHIQPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLL 181
Query: 133 FTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPM 192
F+ SA L++A E+SLLNP+ +H + S KPFYAI+HR+ ++ID EP + + +
Sbjct: 182 FSPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPAL 241
Query: 193 TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEV 252
+ AGA+QS KLA +AI+RLQ+LP G ++ LCDT+++ V ELTGYDRVM Y+FHED+HGEV
Sbjct: 242 SIAGAVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEV 301
Query: 253 VSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTL 312
V+E + LEPYLGLHYPATDIPQA+RFLF +N+VRMI DC A V+V+QD + L L
Sbjct: 302 VAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCL 361
Query: 313 CGSTLRAPHSCHLQYMENMNSIASLVMAVVVN---DEEEEGDNTLPQKRKRLWGLVVCHN 369
GSTLRAPH CH QYM NM SIASLVMAV+++ D+E+ G + K LWGLVVCH+
Sbjct: 362 VGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMK-LWGLVVCHH 420
Query: 370 TTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIV 429
T+PR +PFPLRYACEFL Q F + +N EL+L +Q+ EK+ILRTQTLLCDML+RD+P GIV
Sbjct: 421 TSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIV 480
Query: 430 TQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDA 489
TQSP+IMDLVKCDGAAL Y K + LGVTP + Q+ DI+ WL+ H DSTGLS DSL DA
Sbjct: 481 TQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADA 540
Query: 490 GYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSS 549
GYLGA ALGD VCGMA I+P D +FWFRS TA E++WGGAKH P++KDDG++MHPRSS
Sbjct: 541 GYLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 600
Query: 550 FKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI---HSKLCDLKIE 606
FKAFLEVVK+RSLPW++ EMDAIHSLQLILR++F+D ++K+I +L +L++
Sbjct: 601 FKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELR 660
Query: 607 GMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LV 665
G+ EL +V EMVRLIETATVPI AVD DG +NGWN KIAELTGLSV++A+GK + L+
Sbjct: 661 GINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLI 720
Query: 666 EDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVC 725
S + V+++L AL+G+E++N++ ++KT GS+ ++ I +IVNAC+SRD N+VGVC
Sbjct: 721 FKESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVC 780
Query: 726 FVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWK 785
FV QD+T QK VMDKF I+GDYKAIV NPNPLIPPIF SDE C EWN AM KLTGW
Sbjct: 781 FVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWS 840
Query: 786 REEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYA 845
R EV+ K L+ EVFG+ CRLK +A +V++ A+ GQD EK PF FF +NGKY
Sbjct: 841 RGEVVGKFLIGEVFGS---FCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYV 897
Query: 846 ECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRN 905
+ LL N + +G G FCFLQ+AS E+QQA +QR E+ R+K LAY ++I+N
Sbjct: 898 QALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKN 957
Query: 906 PLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFT 965
PLSGI F+ +++ T+L +Q++ L T + C+ Q+ KI+ D+ L SI DG L LE EF+
Sbjct: 958 PLSGIRFTNSLLQMTDLNDDQRQFLETCSACEEQMSKIVKDATLQSIEDGSLVLEKSEFS 1017
Query: 966 LNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPN 1025
+V+ A +SQ M+ + ++++ + ++I + YGD R+QQVLADFL + P+
Sbjct: 1018 FGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPS 1077
>sp|P14713|PHYB_ARATH Phytochrome B OS=Arabidopsis thaliana GN=PHYB PE=1 SV=1
Length = 1172
Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1065 (52%), Positives = 748/1065 (70%), Gaps = 30/1065 (2%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGD 58
S ++ + SNT ++ I Q T+DA+LHA FE SG SFDYS S++ +T G
Sbjct: 40 SGTKSLRPRSNT---ESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK--TTTYGS 94
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P ++ TAYL IQ+G IQPFGC++A+DE +F++I YSENA E+L ++ +VP++
Sbjct: 95 SVP--EQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTLE 152
Query: 119 DHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSL 178
+L +G+D++++FT+ S+ L++A E++LLNP+ +H K +GKPFYAI+HR+ +
Sbjct: 153 KPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 212
Query: 179 IIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDR 238
+ID EP + + ++ AGA+QS KLA +AI++LQ+LP G ++ LCDT+++ V +LTGYDR
Sbjct: 213 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 272
Query: 239 VMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV 298
VM YKFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V
Sbjct: 273 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 332
Query: 299 KVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKR 358
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N E++G N +
Sbjct: 333 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 392
Query: 359 K-RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LRTQTLLC
Sbjct: 393 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 452
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQSP+IMDLVKCDGAA LY K + LGV P++ Q+ D+V WL H D
Sbjct: 453 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 512
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY GA ALGD VCGMA I+ +D +FWFRS TA E++WGGAKH P++
Sbjct: 513 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 572
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIH 597
KDDG++MHPRSSF+AFLEVVK+RS PW+ EMDAIHSLQLILR++FK+ +++
Sbjct: 573 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKE------SEAAMN 626
Query: 598 SKLCDLKI---------EGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAEL 648
SK+ D + +G+ EL AV EMVRLIETATVPI AVD G +NGWN KIAEL
Sbjct: 627 SKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 686
Query: 649 TGLSVDKAIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITL 707
TGLSV++A+GK ++ L+ + TV ++L AL+G EE+N++ ++KT ++ + +
Sbjct: 687 TGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFV 746
Query: 708 IVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDE 767
+VNAC+S+D +N+VGVCFV QD+T QK VMDKF I+GDYKAIV +PNPLIPPIF +DE
Sbjct: 747 VVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADE 806
Query: 768 FGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSG 827
C EWN AM KLTGW R EVI K+++ EVFG+ CC LK +A IVL+ A+ G
Sbjct: 807 NTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS---CCMLKGPDALTKFMIVLHNAIGG 863
Query: 828 QDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
QD +K PF FF RNGK+ + LL NK++ EG V G FCFLQ+ S ELQQAL VQR +
Sbjct: 864 QDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDT 923
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ K LAY + I+NPLSG+ F+ ++E T+L +QK+LL TS C++Q+ +I+ D
Sbjct: 924 ECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM 983
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL+SI DG L+ EF L V+ A +SQ M +G++++ + E+I S ++GD IR
Sbjct: 984 DLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIR 1043
Query: 1008 LQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+QQ+LA+FL I + P+ + + S Q+ E R
Sbjct: 1044 IQQLLAEFLLSIIRYAPSQEWVEIHLSQLSKQMADGFAAIRTEFR 1088
>sp|P14714|PHYC_ARATH Phytochrome C OS=Arabidopsis thaliana GN=PHYC PE=1 SV=1
Length = 1111
Score = 1138 bits (2944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/1047 (51%), Positives = 747/1047 (71%), Gaps = 10/1047 (0%)
Query: 9 SSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTT 68
S S + +SR ++RV +Q +DAKLH +FE S FDYS S+ ++ + + P S +
Sbjct: 6 SRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSS--AVS 63
Query: 69 AYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSD 128
YL IQ+G LIQPFGCL+ +DEK KVIA+SEN E+L ++ H VPS+ L IG+D
Sbjct: 64 TYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGTD 123
Query: 129 IKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPY 188
+K++F +P SAL+KA+ FGE+S+LNPI +HC++S KPFYAI+HR+ L+ID EPV P
Sbjct: 124 VKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPD 183
Query: 189 EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
EVP+TAAGAL+SYKLAAK+I+RLQ+LPSG+M LCD +++EV ELTGYDRVM YKFHED
Sbjct: 184 EVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDG 243
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPF 308
HGEV++E + +EPYLGLHY ATDIPQA+RFLFM+NKVRMI DC A VKV+QD+ L
Sbjct: 244 HGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQ 303
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
++L GSTLRAPH CH QYM NM S+ASLVM+V +N + + N Q + LWGLVVCH
Sbjct: 304 PISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCH 363
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGI 428
+ +PRFVPFPLRYACEFL QVF + +NKE E + EK IL+TQ++LCDML R+AP+GI
Sbjct: 364 HASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGI 423
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
VTQSPNIMDLVKCDGAAL Y++ +W LGVTP + Q+ D++ W+ + H +TG + +SL +
Sbjct: 424 VTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLME 483
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRS 548
+GY A LG+ +CGMAAV IS KD +FWFRS TA +++WGGA+H+P+++ DG++MHPRS
Sbjct: 484 SGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRS 542
Query: 549 SFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGM 608
SFKAF+E+V+ +S+PW D EMDAI+SLQLI++ + ++ + + L D +++ +
Sbjct: 543 SFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE----EHSKTVVDVPLVDNRVQKV 598
Query: 609 KELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLTLVEDS 668
EL + +EMVRLI+TA VPI AVD G++NGWN+K AE+TGL+V++AIGK LVED
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 669 SIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVA 728
S++TVK ML LAL+G EE+ + I+ G K P+ L+VN C SRD+ +NV+GVCF+
Sbjct: 659 SVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIG 718
Query: 729 QDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREE 788
QD+T QKT+ + ++R++GDY I+ +P+ LIPPIF ++E G C EWN AM KL+G KREE
Sbjct: 719 QDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREE 778
Query: 789 VIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ-DPEKVPFGFFARNGKYAEC 847
V++K+LL EVF T+ C LK+ + L I N +SGQ + EK+ FGF+ R+G + E
Sbjct: 779 VVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEA 838
Query: 848 LLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPL 907
LL NK+ D EG VTGV CFLQ+ S ELQ AL VQ++SE L LAY + ++++P
Sbjct: 839 LLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPE 898
Query: 908 SGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLN 967
I F + ++ + L +QKRLL TS C+ QL K++ DSD++ I +GY++L+ EF L
Sbjct: 899 KAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQ 958
Query: 968 EVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGG 1027
E L A + QVM S + ++I + +++ S LYGD++RLQQ+L++ L SI F P
Sbjct: 959 ESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALR 1018
Query: 1028 QLMVSSSLTK--DQLGQSVHLAYLELR 1052
L VS + + +G+ + LE R
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFR 1045
>sp|P42497|PHYD_ARATH Phytochrome D OS=Arabidopsis thaliana GN=PHYD PE=1 SV=2
Length = 1164
Score = 1135 bits (2935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1059 (52%), Positives = 741/1059 (69%), Gaps = 17/1059 (1%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSG---TSFDYSNSVRVSSTAGGDQQ 60
S+ Q ++ G + + + I Q T+DA+LHA FE SG SFDYS S++ TA D
Sbjct: 41 SQNQQPQNHGGGTESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLK---TAPYDSS 97
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++T AYL IQ+G QPFGCL+A++E TF +I YSENA E+L +++ +VPS+ D
Sbjct: 98 VPEQQIT-AYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDK 156
Query: 121 P-VLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 179
VL IG+D++++F + S L++A E++LLNPI +H +GKPFYAI+HRV ++
Sbjct: 157 SEVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGIL 216
Query: 180 IDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRV 239
ID EP + + ++ AGA+QS KLA +AI+ LQSLPSG ++ LCDT+++ V +LTGYDRV
Sbjct: 217 IDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRV 276
Query: 240 MAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVK 299
M YKFHED+HGEVV+E ++ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A V+
Sbjct: 277 MVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVR 336
Query: 300 VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGD--NTLPQK 357
V+QD++L + L GSTLRAPH CH QYM NM SIASL MAV++N EE+G+ NT +
Sbjct: 337 VVQDDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRN 396
Query: 358 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLC 417
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q+ EK +LR QTLLC
Sbjct: 397 SMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLC 456
Query: 418 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMD 477
DML+RD+P GIVTQ P+IMDLVKC+GAA LY+ K + LGVTP D Q++DIV WL H D
Sbjct: 457 DMLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSD 516
Query: 478 STGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE 537
STGLS DSL DAGY A ALGD VCGMA I+ +D +FWFRS T E++WGGAKH P++
Sbjct: 517 STGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPED 576
Query: 538 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTK--- 594
KDDG++M+PRSSF+ FLEVVK+R PW+ EMDAIHSLQLILR++FK+ +D
Sbjct: 577 KDDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAG 636
Query: 595 SIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVD 654
++ D+ +GM+E+ AV EMVRLIETATVPI AVD+DG +NGWN KIAELTGLSV+
Sbjct: 637 AVQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVE 696
Query: 655 KAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACA 713
A+GK + L+ +TV R+L AL+G E +N++ ++KT GS++ + ++VNAC+
Sbjct: 697 DAMGKSLVRELIYKEYKETVDRLLSCALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACS 756
Query: 714 SRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCE 773
S+D +N+VGVCFV QD+T K VMDKF I+GDYKAI+ +PNPLIPPIF +DE C E
Sbjct: 757 SKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLE 816
Query: 774 WNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKV 833
WN AM KLTGW R EVI KLL+ EVFG+ CRLK +A IVL+ A+ GQD +K
Sbjct: 817 WNTAMEKLTGWPRSEVIGKLLVREVFGSY---CRLKGPDALTKFMIVLHNAIGGQDTDKF 873
Query: 834 PFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRL 893
PF FF R G++ + LL +NK++ +G + G FCFLQ+ S ELQQAL VQR E R
Sbjct: 874 PFPFFDRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933
Query: 894 KALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSII 953
K LAY + I+NPLSG+ F+ ++E +L +QK+LL TS C++Q+ KI+ D D+ SI
Sbjct: 934 KELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993
Query: 954 DGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLA 1013
DG LE EF + V A +SQVM+ + ++++ ++ S +YGD IRLQQVLA
Sbjct: 994 DGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLA 1053
Query: 1014 DFLSISINFVPNGGQLMVSSSLTKDQLGQSVHLAYLELR 1052
+FL + + P G + + T +Q+ LE R
Sbjct: 1054 EFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFR 1092
>sp|P33529|PHY_MOUSC Phytochrome OS=Mougeotia scalaris GN=PHY PE=2 SV=2
Length = 1124
Score = 1109 bits (2869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1034 (53%), Positives = 733/1034 (70%), Gaps = 11/1034 (1%)
Query: 23 IAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAG-GDQQPRSDRVTTAYLHHIQKGKLIQ 81
+ Q + DAKL FE S +S S S TA +P + + TAYL +Q+G +IQ
Sbjct: 23 VTQASADAKLSTAFEVSSSSGGDSFDYTKSVTASLNPTEPLAAKSVTAYLQRMQRGSIIQ 82
Query: 82 PFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHP-VLGIGSDIKTIFTAPSASA 140
FGC++A++ TF++IAYSEN E+L + +VP+ GDH +GIG+D++++ + S S
Sbjct: 83 SFGCMMAVEPGTFRIIAYSENVSEMLGVTPQSVPT-GDHQNAIGIGTDVRSLLSPSSVSV 141
Query: 141 LQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEV-PMTAAGALQ 199
++KA+ +VS++NPI V+ + K F+AI+H L+ID EP+ M +AGA+Q
Sbjct: 142 VEKAVAANDVSMMNPIAVYSLATQKLFFAILHMNDVGLVIDLEPISSSSDSAMFSAGAVQ 201
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
S+KLAAKAI+RLQSLP G + LCD +++EV ELTGYDRVMAYKFH+D+HGEVV+EI +S
Sbjct: 202 SHKLAAKAISRLQSLPGGDICGLCDVVVEEVRELTGYDRVMAYKFHDDEHGEVVAEIRRS 261
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
LEPYLGLHYPATDIPQA+RFLF+KN++RMI DC + VKV+QD ++P +++L GST+R
Sbjct: 262 DLEPYLGLHYPATDIPQASRFLFIKNRIRMICDCTSPQVKVVQDSRIPQEMSLAGSTMRG 321
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPRFVPFPL 379
H CH QYM NM S ASLVM+V +ND E K ++LWGL+VCH++TPR +PFP+
Sbjct: 322 VHGCHTQYMMNMGSTASLVMSVTINDTNEIAGGP-GMKGRKLWGLIVCHHSTPRHIPFPI 380
Query: 380 RYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLV 439
R ACEFL QVF + +N E+EL Q EK+ILRTQTLLCDML+RDAP+GIV+QSPN+MDLV
Sbjct: 381 RSACEFLMQVFGLQLNMEVELAAQHREKHILRTQTLLCDMLLRDAPMGIVSQSPNVMDLV 440
Query: 440 KCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAGYLGALALGD 499
KCDGAALL+ + W LG++P Q+ DI +WL H D+TGLS DSL DAGY A LG
Sbjct: 441 KCDGAALLFGGRCWLLGISPTQEQVKDIATWLISSHTDTTGLSTDSLVDAGYPKARELGV 500
Query: 500 VVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKT 559
VCGMAA RI+ D +FWFR EV+W GAK E +DG +MHPRSSFKAFLEVVK
Sbjct: 501 DVCGMAAARITENDFLFWFRGHAQKEVKWAGAKDGGSE-EDGSRMHPRSSFKAFLEVVKQ 559
Query: 560 RSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKLCDLKIEGMKELEAVTSEMV 619
RSLPW+D EMDAIHSLQLILR +F+D+ + D K +H++L ++ ++GM+EL +V SEMV
Sbjct: 560 RSLPWEDVEMDAIHSLQLILRGSFQDIEDKE-DRKIVHARLKEMHLQGMEELSSVASEMV 618
Query: 620 RLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKHFLT-LVEDSSIDTVKRMLY 678
RLIETAT PILAVD G VNGWN KI+ELTGLS+ + +GK + L SS DTV+++LY
Sbjct: 619 RLIETATAPILAVDTAGCVNGWNFKISELTGLSIPEVMGKSLVKDLTHPSSKDTVEKLLY 678
Query: 679 LALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDNVVGVCFVAQDITPQKTVM 738
+AL G+EEQN++ +KT G + P+ L+VNACASRD+ + VVGVCFVAQD+T +K V
Sbjct: 679 MALNGEEEQNVEIRLKTWGMQQGKGPVILMVNACASRDVSEKVVGVCFVAQDVTGEKIVQ 738
Query: 739 DKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEV 798
DKFTRI+GDY IV++ N LIPPIFGSDE G+C EWNPAM +L+G KREE I K+L E+
Sbjct: 739 DKFTRIQGDYTTIVRSHNSLIPPIFGSDESGFCVEWNPAMERLSGVKREEAIGKMLTREL 798
Query: 799 FGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFARNGKYAECLLCVNKKLDRE 858
FG RLKN + IVLN AMS D +K PF F+ R+GK E LL +K+ + E
Sbjct: 799 FG---GILRLKNVDGLTKFMIVLNAAMSSHDTDKFPFTFYDRSGKIVEVLLTTSKRCNSE 855
Query: 859 GAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMME 918
G VTGVFCFL AS ELQQAL VQ+ +E+ A + K LAY +++I+NPL GI F+R ME
Sbjct: 856 GVVTGVFCFLHTASSELQQALTVQKAAERVAEVKAKELAYIRQEIQNPLDGIHFARSFME 915
Query: 919 GTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVM 978
T L +QK+L+ TSA C++QL +IL D DL SI GYL+LE EF++ V+ + +SQ M
Sbjct: 916 HTVLSEDQKQLIETSATCEKQLRRILADMDLASIEKGYLELETGEFSMATVMNSVVSQGM 975
Query: 979 MKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKD 1038
++S K +++ +T S +++GD +RLQQVLADFL ++ F P G + +
Sbjct: 976 IQSTQKNLQLYCDTPPDFKSLSVFGDQVRLQQVLADFLLNAVQFTPPSGWVEIKVEPVVK 1035
Query: 1039 QLGQSVHLAYLELR 1052
+L V +A ++ R
Sbjct: 1036 KLPGGVSVANVDFR 1049
>sp|P55004|PHYE_IPONI Phytochrome E OS=Ipomoea nil GN=PHYE PE=2 SV=1
Length = 1115
Score = 1047 bits (2708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/1029 (51%), Positives = 705/1029 (68%), Gaps = 38/1029 (3%)
Query: 4 SRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGDQQ 60
S A S+ NTGK+ IAQ DAKL A+FE S G SFDYS SV + Q
Sbjct: 11 SSSATSNLNTGKA------IAQYNADAKLMAEFEQSRESGKSFDYSRSVIHAP------Q 58
Query: 61 PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120
++ TAYL IQ+G LIQPFGC+LA++E +FK++ +SEN +LL + + P
Sbjct: 59 NVTEEEMTAYLSRIQRGGLIQPFGCMLAIEEPSFKIVGFSENCFDLLGLKSGVEPP---E 115
Query: 121 PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180
+ IG D +T+FT S ++L KA+ E+SLLNPI VH K + KPFYA++HR+ ++I
Sbjct: 116 RMSLIGIDARTLFTLSSRASLAKAVASREISLLNPIWVHSKINQKPFYAVLHRIDVGIVI 175
Query: 181 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240
D EP + + AGA+QS KLA +AI+RLQSLP G + LCDT++++V +LTGYDRVM
Sbjct: 176 DLEPANSADPALLLAGAVQSQKLAVRAISRLQSLPGGDIGTLCDTVVEDVQKLTGYDRVM 235
Query: 241 AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300
YKFH+D HGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A+ VKV
Sbjct: 236 VYKFHDDSHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNAQPVKV 295
Query: 301 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR 360
LQ E+L L L STLR+PH CH +YM NM SIASLVMAVV+N E +
Sbjct: 296 LQCEELKQPLCLVNSTLRSPHGCHTKYMANMGSIASLVMAVVINSSES----------MK 345
Query: 361 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML 420
LWGLVVCH+T+PR+VPFPLRYACEFL Q F++ + EL+L Q+ EK IL+TQTLLCDML
Sbjct: 346 LWGLVVCHHTSPRYVPFPLRYACEFLMQAFSLQLYMELQLASQLAEKKILQTQTLLCDML 405
Query: 421 MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG 480
+RDAP GIVTQ+P+IMDLV+CDGAAL Y K W LGVTP + Q+ DI WL H DSTG
Sbjct: 406 LRDAPFGIVTQTPSIMDLVRCDGAALYYNGKCWLLGVTPTETQVKDIAEWLLHNHGDSTG 465
Query: 481 LSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD 540
LS D L DAGY GA LGD V GMA RI+ KD +FWFRS TA EV+WGGAKH P++KDD
Sbjct: 466 LSTDCLSDAGYPGAPLLGDAVSGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDD 525
Query: 541 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL 600
G +MHPRSSF AFLEVVK+RSLPW+D E++AIHSLQLI+R++ + +G + KS+ S
Sbjct: 526 GGRMHPRSSFIAFLEVVKSRSLPWEDSEINAIHSLQLIMRDSLQGIGENYM--KSVSSPQ 583
Query: 601 CDLKIEGMK--ELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIG 658
+ +G++ EL ++ E+VRL+ETATVPI VD GL+NGWN KIAELTGL + AIG
Sbjct: 584 QN-DSDGVRFYELSSMALELVRLVETATVPIFGVDSSGLINGWNAKIAELTGLQANVAIG 642
Query: 659 KHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDL 717
K+ + + + S +T K ++ ALQG+E++N++ ++ G+ + + L+VNAC SRD
Sbjct: 643 KYLIDDVTHEDSHETFKALMCRALQGEEDRNVEVKLLKFGNHPTKEVVYLVVNACTSRDY 702
Query: 718 HDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPA 777
++++GVCFV QDITP+K VMDKF R++GDY+AI+Q+ NPLIPPIF SDE C EWN A
Sbjct: 703 KNDIIGVCFVGQDITPEKAVMDKFVRLQGDYEAIIQSLNPLIPPIFASDENACCSEWNAA 762
Query: 778 MVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGF 837
M +LTG + EVI K L E+FG CRLK Q+A I+L + +SG D EK+ FGF
Sbjct: 763 MERLTGLVKCEVIGKRLPGEIFG---GLCRLKGQDALTKFMILLYQGISGHDTEKLSFGF 819
Query: 838 FARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALA 897
F R G + + + NK+ D G + G FCFLQ + + Q ++ L LK A
Sbjct: 820 FDRKGNFIDVFITANKRTDERGNIIGCFCFLQTMAVDHPQISARDIEDDRECLSTLKEFA 879
Query: 898 YTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDG-Y 956
Y ++Q++NPL+GI F+ K++EGT QK+ L TS C++Q+ I+++ D I+DG
Sbjct: 880 YIQQQMKNPLNGIRFTHKLLEGTVTSDHQKQFLETSEACEKQILSIIENMDSGGIVDGNR 939
Query: 957 LDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFL 1016
++L+ EF + V+ A +SQVM+ K ++++++ +QI S +YGD I+LQ VL+DFL
Sbjct: 940 VELKTEEFVIGNVIDAVVSQVMIPLKEKNLQLLHDIPDQIKSLPIYGDQIKLQLVLSDFL 999
Query: 1017 SISINFVPN 1025
+ P+
Sbjct: 1000 LSIVRHAPS 1008
>sp|P42499|PHYB_SOYBN Phytochrome B OS=Glycine max GN=PHYB PE=3 SV=1
Length = 1156
Score = 1043 bits (2698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/1036 (50%), Positives = 705/1036 (68%), Gaps = 47/1036 (4%)
Query: 20 ARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQK 76
++ IAQ T D +HA FE SG S F+YS S+R++S + +QQ TAYL IQ+
Sbjct: 39 SKAIAQYTEDG-VHAVFEQSGESGRSFNYSESIRIASESVPEQQ------ITAYLVKIQR 91
Query: 77 GKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH---------------- 120
G IQPFG ++A+DE +F+++ YS+NA ++L + +VPS+ D
Sbjct: 92 GGFIQPFGSMIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGPQSVPSLD 151
Query: 121 ----PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTG 176
+G+D++ +FT SA L+KA E+SL+NPI +H +TSGKPFY I+HR+
Sbjct: 152 DKNDAAFALGTDVRALFTHSSALLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDV 211
Query: 177 SLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGY 236
++ID EP + + ++ AGA+QS + +AI++LQSLPS ++ LCDT+++ V ELTGY
Sbjct: 212 GIVIDLEPARTEDPALSIAGAVQSQEALVRAISQLQSLPSADVKLLCDTVVESVRELTGY 271
Query: 237 DRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAR 296
DRVM YKFHED+HGEVVSE + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC A
Sbjct: 272 DRVMVYKFHEDEHGEVVSESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHAS 331
Query: 297 HVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ 356
V+V+QDE L L L GSTL APH CH QYM NM SIASLVMAV++N +EEG +
Sbjct: 332 AVRVVQDEALVQPLCLVGSTLGAPHGCHAQYMANMGSIASLVMAVIINGNDEEGVGG--R 389
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N EL+L Q LEK +LRTQTLL
Sbjct: 390 SSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLL 449
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDML+RD+P GIVTQSP+IMDLVKCDGAAL ++ + LGVTP + Q+ DI+ WL +H
Sbjct: 450 CDMLLRDSPTGIVTQSPSIMDLVKCDGAALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHG 509
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL DAGY G LG G I+ KD +FWFRS TA E++WGGAK
Sbjct: 510 DSTGLSTDSLGDAGYPGLPRLGMQFVGWQVAYITEKDFLFWFRSHTAKEIKWGGAKLILR 569
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSI 596
+ G++MHP SSFKAFLEVVK+RSLPW++ EMDAIHSLQLILR++FKD + +
Sbjct: 570 TRMMGQRMHPLSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEHRN-SKAVV 628
Query: 597 HSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKA 656
+ + +++G+ EL +V EMVRLIETAT PI AVDVDG VNGWN K++ELTGL V++A
Sbjct: 629 DPHVSEQELQGVDELSSVAREMVRLIETATAPIFAVDVDGHVNGWNAKVSELTGLPVEEA 688
Query: 657 IGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASR 715
+GK + LV S +TV ++ L +E++N++ +++T G + + L+VNAC+S+
Sbjct: 689 MGKSLVHDLVFKESEETVNKL----LSREEDKNVETKMRTFGKEHQNKAAFLVVNACSSK 744
Query: 716 DLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWN 775
+NVVGVCFV Q++T QK VM KF I+GDYKAIV +PNPLIPPIF SD+ C EWN
Sbjct: 745 HFTNNVVGVCFVGQNVTGQKIVMHKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWN 804
Query: 776 PAMVKLTGWKRE------EVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQD 829
AM KL +VI K+L+ EVFG+ CC+LK ++ IVL+ A+ GQD
Sbjct: 805 TAMEKLDPSNENVTVGGVDVIGKMLVGEVFGS---CCQLKGSDSITKFMIVLHNALGGQD 861
Query: 830 PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTA 889
+K PF F R+GKY + L NK+++ EG + G FCFLQ+ S ELQQAL QR E+
Sbjct: 862 TDKFPFSFLDRHGKYVQTFLTANKRVNMEGQIIGAFCFLQIMSPELQQALKAQRQQEKEF 921
Query: 890 LKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDL 949
L R+K LAY + ++ PLSGI F+ ++E T L EQK+ L TS C++Q+ KI+ D DL
Sbjct: 922 LGRMKELAYICQGVKKPLSGIRFTNSLLEATSLTNEQKQFLETSVACEKQMLKIIRDVDL 981
Query: 950 DSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQ 1009
+SI DG L+LE EF L V+ A +SQV++ + ++++ + E+I + +YGD +R+Q
Sbjct: 982 ESIEDGSLELEKGEFLLGNVINAVVSQVILLLRERNLQLIRDIPEEIKTLAVYGDQLRIQ 1041
Query: 1010 QVLADFLSISINFVPN 1025
QVL+DFL + + P+
Sbjct: 1042 QVLSDFLLNIVRYAPS 1057
>sp|P42498|PHYE_ARATH Phytochrome E OS=Arabidopsis thaliana GN=PHYE PE=1 SV=2
Length = 1112
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/1066 (48%), Positives = 691/1066 (64%), Gaps = 64/1066 (6%)
Query: 2 SSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETS---GTSFDYSNSVRVSSTAGGD 58
S+ +P SNT AQ ++DA L ADF S G SF+YS SV + +
Sbjct: 11 SNMKPQPQKSNT----------AQYSVDAALFADFAQSIYTGKSFNYSKSV----ISPPN 56
Query: 59 QQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVG 118
P D TAYL +IQ+G L+QPFGCL+A++E +F+++ S+N+ + L ++ ++PS
Sbjct: 57 HVP--DEHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLL--SLPSTS 112
Query: 119 DH----PVLG-IGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHR 173
V G IG D +T+FT S ++L KA F E+SLLNP+LVH +T+ KPFYAI+HR
Sbjct: 113 HSGEFDKVKGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHR 172
Query: 174 VTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFEL 233
+ +++D EP K + +T AGA+QS KLA +AI+RLQSLP G + LCDT++++V L
Sbjct: 173 IDAGIVMDLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRL 232
Query: 234 TGYDRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDC 293
TGYDRVM Y+FHEDDHGEVVSEI +S LEPYLGLHYPATDIPQAARFLF +N+VRMI DC
Sbjct: 233 TGYDRVMVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDC 292
Query: 294 RARHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNT 353
A VKV+Q E+L L L STLRAPH CH QYM NM S+ASL +A+VV ++
Sbjct: 293 NATPVKVVQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDS----- 347
Query: 354 LPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQ 413
+LWGLVV H+ +PR+VPFPLRYACEFL Q F + + EL+L Q+ EK +RTQ
Sbjct: 348 -----SKLWGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQ 402
Query: 414 TLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSE 473
TLLCDML+RD IVTQSP IMDLVKCDGAAL YK K W +GVTPN+ Q+ D+V+WL E
Sbjct: 403 TLLCDMLLRDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVE 462
Query: 474 YHM-DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAK 532
H DSTGL+ DSL DAGY GA++LGD VCG+AA S KD + WFRS TAS ++WGGAK
Sbjct: 463 NHGDDSTGLTTDSLVDAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAK 522
Query: 533 HEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLD 592
H P +KDD +MHPRSSF AFLEV K+RSLPW+ E+DAIHSL+LI+R +F
Sbjct: 523 HHPKDKDDAGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESF--------- 573
Query: 593 TKSIHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLS 652
T S + EL + EMVR+IETAT PI VD G +NGWN K AE+TGL
Sbjct: 574 TSSRPVLSGNGVARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLL 633
Query: 653 VDKAIGKHFL-TLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDD---PITLI 708
+A+GK +V++ S ++ +L ALQG+EE+++ +++ G + D + ++
Sbjct: 634 ASEAMGKSLADEIVQEESRAALESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVL 693
Query: 709 VNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEF 768
VN+C SRD +N++GVCFV QDIT +K + D+F R++GDYK IVQ+ NPLIPPIF SDE
Sbjct: 694 VNSCTSRDYTENIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDEN 753
Query: 769 GWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQ 828
C EWN AM KLTGW + EVI K+L EVFG C++K Q++ I L + ++G
Sbjct: 754 ACCSEWNAAMEKLTGWSKHEVIGKMLPGEVFGV---FCKVKCQDSLTKFLISLYQGIAGD 810
Query: 829 D-PEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQ 887
+ PE FF + GKY E L NK + EG V F FLQ+ + E L L E
Sbjct: 811 NVPESSLVEFFNKEGKYIEASLTANKSTNIEGKVIRCFFFLQIINKE--SGLSCPELKES 868
Query: 888 TALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS 947
+ L L Y +++I+NPL+GI F+ K++E +E+ A Q++ L TS C++Q+ I++ +
Sbjct: 869 A--QSLNELTYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIEST 926
Query: 948 DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIR 1007
DL SI +G L LE EF L +L ISQVM+ + ++ E AE+I + L GD ++
Sbjct: 927 DLKSIEEGKLQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVK 986
Query: 1008 LQQVLADFLSISINFVPN-----GGQLMVSSSLTKDQLGQSVHLAY 1048
LQ +LAD L +N P G + L++D G+ +HL +
Sbjct: 987 LQLILADLLRNIVNHAPFPNSWVGISISPGQELSRDN-GRYIHLQF 1031
>sp|P25848|PHY1_CERPU Light-sensor Protein kinase OS=Ceratodon purpureus GN=PHY1 PE=3
SV=3
Length = 1307
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/784 (59%), Positives = 591/784 (75%), Gaps = 16/784 (2%)
Query: 1 MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTS---FDYSNSVRVSSTAGG 57
MS+++ SS+ + KS+HS RV AQTT DA L A +E SG S FDYS SV G
Sbjct: 1 MSATKKTYSSTTSAKSKHSVRV-AQTTADAALEAVYEMSGDSGDSFDYSKSV------GQ 53
Query: 58 DQQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSV 117
+ TAYL +Q+ LIQ FGC++A++E F VIAYSENA E L ++ AVPS+
Sbjct: 54 SAESVPAGAVTAYLQRMQREGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQAVPSM 113
Query: 118 GDHPVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGS 177
G+ VLGIG+DI+T+FT S++AL+KA ++SLLNPI VHC+ SGKP YAI HR+
Sbjct: 114 GEMDVLGIGTDIRTLFTPSSSAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIG 173
Query: 178 LIIDFEPVKPYEVPMTAA-GALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGY 236
++IDFE VK +VP++AA GALQS+KLAA+AITRLQ+LP G +E LCDT+++EV ELTGY
Sbjct: 174 IVIDFEAVKMIDVPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRELTGY 233
Query: 237 DRVMAYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAR 296
DRVMA+KFHED+HGEVV+EI + LEPY+GLHYPATDIPQA+RFL MKN+VR+I DC A
Sbjct: 234 DRVMAFKFHEDEHGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIADCYAS 293
Query: 297 HVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQ 356
VK++QD + ++L GSTLRAPH CH QYM NM SIASLVMAV++ND EE + Q
Sbjct: 294 PVKLIQDPDIRQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRGAI-Q 352
Query: 357 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLL 416
+ ++LWGLVVC +T+PR VPFPLR CEFL QVF + +N +EL Q+ EK+ILRTQTLL
Sbjct: 353 RGRKLWGLVVCQHTSPRTVPFPLRSVCEFLMQVFGMQLNLHVELAAQLREKHILRTQTLL 412
Query: 417 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHM 476
CDML+RDAP+GIV+Q+PNIMDLVKCDGAAL Y ++W LG TP + Q+ +I WL E+H
Sbjct: 413 CDMLLRDAPIGIVSQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLEHHN 472
Query: 477 DSTGLSADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPD 536
DSTGLS DSL DA Y GA LGD VCGMAA +I+ KD +FWFRS TA+EV+WGGAKH+PD
Sbjct: 473 DSTGLSTDSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKHDPD 532
Query: 537 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKS- 595
EKDDGRKMHPRSSFKAFLEVV RS PW+D EMDAIHSLQLILR +F+D+ D DTK+
Sbjct: 533 EKDDGRKMHPRSSFKAFLEVVNKRSPPWEDVEMDAIHSLQLILRGSFRDIA--DSDTKTM 590
Query: 596 IHSKLCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDK 655
IH++L DLK++G++E A+ +EM R++ETA PILAVD G++N WN KIA++TGL V++
Sbjct: 591 IHARLNDLKLQGVEERNALANEMSRVLETAAAPILAVDSRGMINAWNAKIAQVTGLPVEE 650
Query: 656 AIGKHFLT-LVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACAS 714
A+ LV D S+ V+R+L LALQG+EEQN++ ++KT G++ + + LIVNAC S
Sbjct: 651 AMHCSLTKDLVLDESVVVVERLLSLALQGEEEQNVEIKLKTFGTQTTERAVILIVNACCS 710
Query: 715 RDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEW 774
RD D VVGV FV QD+T Q+ MD+FTRI+G K VQ+P+PL+ P F DEFG +
Sbjct: 711 RDASDFVVGVFFVGQDVTEQRMFMDRFTRIQGGEKTTVQDPHPLMRPSFDGDEFGRTFKR 770
Query: 775 NPAM 778
N A+
Sbjct: 771 NSAL 774
>sp|P06595|PHYA5_AVESA Phytochrome A type 5 (Fragment) OS=Avena sativa GN=PHYA5 PE=1 SV=3
Length = 495
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/477 (71%), Positives = 400/477 (83%), Gaps = 7/477 (1%)
Query: 20 ARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQPRSDRVTTAYLHHIQKGKL 79
ARV+AQTT+DA+L+A++E SG SFDYS V QQ RS++V AYL HIQKGKL
Sbjct: 20 ARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVI-AYLQHIQKGKL 78
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQ FGCLLALDEK+F VIA+SENAPE+LT V+HAVPSV D P LGIG++++++F+ A+
Sbjct: 79 IQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGAT 138
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
AL KALGF +VSLLNPILV CKTSGKPFYAIVHR TG L++DFEPVKP E P TAAGALQ
Sbjct: 139 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 198
Query: 200 SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEITKS 259
SYKLAAKAI+++QSLP GSME LC+T+++EVF+LTGYDRVMAYKFHEDDHGEV SEITK
Sbjct: 199 SYKLAAKAISKIQSLPGGSMEMLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEITKP 258
Query: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRA 319
GLEPYLGLHYPATDIPQAARFLFMKNKVRMI DCRAR +KV++ E LPFD++LCGS LRA
Sbjct: 259 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRA 318
Query: 320 PHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQK-----RKRLWGLVVCHNTTPRF 374
PHSCHLQYMENMNSIASLVMAVVVN+ EE+ + Q +K+LWGL+VCH+ +PR+
Sbjct: 319 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESPRY 378
Query: 375 VPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA-PLGIVTQSP 433
VPFPLRYACEFLAQVFA+HVN+E ELE Q+ EKNIL+ QT+L DML R+A PL IV+ +P
Sbjct: 379 VPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSGNP 438
Query: 434 NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYDAG 490
NIMDLVKCDGAALLY K+WRL P + Q+HDI WLS+ H DSTGLS DSL+DAG
Sbjct: 439 NIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAG 495
>sp|Q9LCC2|PHYA_NOSS1 Cyanobacterial phytochrome A OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=aphA PE=3 SV=1
Length = 765
Score = 256 bits (655), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 165/522 (31%), Positives = 266/522 (50%), Gaps = 54/522 (10%)
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQP G LL L+E K++ S N +L + + + ++ + +
Sbjct: 26 IQPHGVLLVLEEPGLKILQVSNNTWGILGINAENI----------LQKKLEDLLDSFQIE 75
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKP---FYAIVHRVT-GSLIIDFEPVKPYE-VPMTA 194
+Q L G + +NP + + G F A+ HR T G LI++ EP E +P
Sbjct: 76 RIQSGLSSGNLEFINPTKIWIRKKGDDYAVFDAVFHRNTEGFLILELEPAITQENIPF-- 133
Query: 195 AGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVS 254
L Y LA +I +LQ + ++ C ++QEV ++T +DRVM YKF +D HG V++
Sbjct: 134 ---LSFYHLAKASINQLQK--TANLRDFCQIIVQEVRKVTDFDRVMLYKFDDDGHGSVIA 188
Query: 255 EITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVLQD----EKLPFDL 310
E LEPYLGLHYP +DIP+ AR LF+ N +R+I + +A+ ++++ P DL
Sbjct: 189 EEKLDSLEPYLGLHYPESDIPKPARKLFISNSIRVIPNAQAQAIQMIPALNPVSDRPVDL 248
Query: 311 TLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNT 370
T S LR+ +CHL+Y+ NM ASL ++++ K +LWGL+ CH+
Sbjct: 249 T--NSILRSAANCHLEYLHNMGVGASLTISLI--------------KDNKLWGLIACHHL 292
Query: 371 TPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPL--GI 428
+ ++V + LR ACEFL +V ++ E E N+ Q+LL + + ++ G+
Sbjct: 293 SAKYVSYELRKACEFLGRVIFAEISAREETEDYDYRMNLTHIQSLLVEYMSQEDNFVDGL 352
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
+ P+++DL GAA+ + + +G TP L +V WL +++ DSL
Sbjct: 353 IKHQPSLLDLTSAQGAAVCFGDHCTLIGETPKAEDLVFLVQWLKN-NVEEEVFYTDSLPQ 411
Query: 489 AGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE--KDDGR-KMH 545
Y A +V G+ A+ IS ++ + WFR + V WGG ++P E K DG ++
Sbjct: 412 V-YPDAERYKNVASGLLAIPISQRNYVLWFRPEVIQTVNWGGDPNQPFEVNKLDGNVRLC 470
Query: 546 PRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQ-----LILRNA 582
PR SF+ + E V+ SLPW+ E+ A L+ ++LR A
Sbjct: 471 PRKSFELWKETVRLTSLPWRYVEIRAALELRKAIVNIVLRQA 512
>sp|Q55168|PHY1_SYNY3 Phytochrome-like protein cph1 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=cph1 PE=1 SV=1
Length = 748
Score = 243 bits (620), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 258/528 (48%), Gaps = 54/528 (10%)
Query: 74 IQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIF 133
I LIQP G ++ L E + S N +L G P +G + +F
Sbjct: 20 IHTAHLIQPHGLVVVLQEPDLTISQISANCTGIL----------GRSPEDLLGRTLGEVF 69
Query: 134 TAPSASALQKALGFGEVSLLNPILVHCKTSGKPFY---AIVHRVT-GSLIIDFEPVKPYE 189
+ +Q L G++S LNP + + G F + HR + G L+ + EP +
Sbjct: 70 DSFQIDPIQSRLTAGQISSLNPSKLWARVMGDDFVIFDGVFHRNSDGLLVCELEPAYTSD 129
Query: 190 -VPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDD 248
+P L Y +A A+ RL+ ++ D +++EV +TG+DRVM Y+F E++
Sbjct: 130 NLPF-----LGFYHMANAALNRLRQ--QANLRDFYDVIVEEVRRMTGFDRVMLYRFDENN 182
Query: 249 HGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHV----KVLQDE 304
HG+V++E + +EPYLGLHYP +DIPQ AR LF+ N +R+I D V V
Sbjct: 183 HGDVIAEDKRDDMEPYLGLHYPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPST 242
Query: 305 KLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGL 364
DLT S LR+ + CHL Y++NM ASL ++++ K LWGL
Sbjct: 243 NRAVDLT--ESILRSAYHCHLTYLKNMGVGASLTISLI--------------KDGHLWGL 286
Query: 365 VVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDA 424
+ CH+ TP+ +PF LR ACEF +V +++ + + E + + +L D + A
Sbjct: 287 IACHHQTPKVIPFELRKACEFFGRVVFSNISAQEDTETFDYRVQLAEHEAVLLDKMTTAA 346
Query: 425 PL--GIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLS 482
G+ ++ L GAA+ + K+ +G TP++ + ++ WL + +
Sbjct: 347 DFVEGLTNHPDRLLGLTGSQGAAICFGEKLILVGETPDEKAVQYLLQWLENREVQDVFFT 406
Query: 483 ADSLYDAGYLGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDE--KDD 540
S Y A+ V G+ A+ I+ + + WFR + V WGG + E ++D
Sbjct: 407 --SSLSQIYPDAVNFKSVASGLLAIPIARHNFLLWFRPEVLQTVNWGGDPNHAYEATQED 464
Query: 541 GR-KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQ-----LILRNA 582
G+ ++HPR SF + E+V+ +SLPW+ E+ + +L+ LILR A
Sbjct: 465 GKIELHPRQSFDLWKEIVRLQSLPWQSVEIQSALALKKAIVNLILRQA 512
>sp|Q9R6X3|PHYB_NOSS1 Cyanobacterial phytochrome B OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=bphB PE=3 SV=1
Length = 751
Score = 235 bits (600), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 152/507 (29%), Positives = 253/507 (49%), Gaps = 50/507 (9%)
Query: 79 LIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSA 138
LIQP G LL L E ++ S N +L G HP + + + A
Sbjct: 27 LIQPHGVLLVLQEVDLTILQVSNNTFNIL----------GRHPEQLLNQHLSCLLEAEQL 76
Query: 139 SALQKALGFGEVSLLNPI--LVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
S L+ L ++ ++NP+ ++ F I HR LI++ E +
Sbjct: 77 SLLKDCLAQEDLQIINPLEFIIKSHNESISFDVIAHRSNNLLILELEA----NLSDKTHS 132
Query: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSEI 256
+ Y L A+ +LQ + + + + QEV ++TG+DRVM Y+F E +G+V++E+
Sbjct: 133 FFRFYHLVKLAMLKLQG--TATTTEISQILAQEVRKITGFDRVMVYRFDEQWNGKVIAEV 190
Query: 257 TKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV------LQDEKLPFDL 310
L YLGL+YPA+DIPQ AR L+ +N +R+I D + + V + L D+ P DL
Sbjct: 191 KPEYLTSYLGLNYPASDIPQQARKLYSQNWLRLIPDAKYQPVPIVPINNPLNDQ--PLDL 248
Query: 311 TLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNT 370
+ S LR+ H++YM+NM AS+ ++++ K ++LWGL+ CH+
Sbjct: 249 S--RSVLRSVSPLHIEYMQNMGVTASMSISIM--------------KNQKLWGLIACHHQ 292
Query: 371 TPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPL--GI 428
+P+++P+ +R ACEFL Q+ ++ ++ + + E + + + L + + +
Sbjct: 293 SPKYIPYEIRSACEFLGQMTSVEMSAKEDSEDTEDKIQVKSVHSKLVQYMSAENDFINAL 352
Query: 429 VTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTGLSADSLYD 488
+ PNI+DLVK GAA+ + +G P + +V W+S+ ++ + DSL
Sbjct: 353 IDHQPNILDLVKAQGAAVCFNGNSCTVGQVPPMPDIQVLVEWMSQ-NIHEEIFATDSLAT 411
Query: 489 AGYLGALALGDVVCGMAAVRI--SPKDMIFWFRSQTASEVRWGGAKHEPDE--KDDGRKM 544
Y A L DV G+ A+ I S K+ I WFR + V WGG H+P E + ++
Sbjct: 412 V-YPDAEKLRDVASGLIALSISRSQKNYILWFRPEVVRTVDWGGNPHKPVEVIANGEIRL 470
Query: 545 HPRSSFKAFLEVVKTRSLPWKDYEMDA 571
PR SF + E V +S PWK +E++A
Sbjct: 471 SPRKSFDLWKETVLLKSQPWKSHEVNA 497
>sp|Q9HWR3|BPHY_PSEAE Bacteriophytochrome OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=bphP PE=1 SV=1
Length = 728
Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 234/527 (44%), Gaps = 87/527 (16%)
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQP G L+ L V+A SEN LL V +P +
Sbjct: 23 IQPHGALVTLRADGM-VLAASENIQALLGFV-----------------------ASPGSY 58
Query: 140 ALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID-----FEPVKPYEVPMTA 194
Q+ +G + +L L T P+ V G + D ++ V E +
Sbjct: 59 LTQEQVGPEVLRMLEEGL----TGNGPWSNSVETRIGEHLFDVIGHSYKEVFYLEFEIRT 114
Query: 195 AGALQ--SYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEV 252
A L S+ L A+ I L + + L + E+ +TGYDRVMAY+F DD GEV
Sbjct: 115 ADTLSITSFTLNAQRIIAQVQLHNDTAS-LLSNVTDELRRMTGYDRVMAYRFRHDDSGEV 173
Query: 253 VSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKVL----QDEKLPF 308
V+E + LE YLG YPA+DIP AR L+++N +R+I D ++V + F
Sbjct: 174 VAESRREDLESYLGQRYPASDIPAQARRLYIQNPIRLIADVAYTPMRVFPALNPETNESF 233
Query: 309 DLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCH 368
DL+ S LR+ H +Y+ NM AS+ +++VV +LWGL CH
Sbjct: 234 DLSY--SVLRSVSPIHCEYLTNMGVRASMSISIVVG--------------GKLWGLFSCH 277
Query: 369 NTTPRFVPFPLRYACEFLAQVFAIHVNK-ELELEYQILEKNILRTQTLLCDMLMRDAPLG 427
+ +P+ +P+P+R + + +QV + V + E ++L + R L D G
Sbjct: 278 HMSPKLIPYPVRMSFQIFSQVCSAIVERLEQGRIAELLRVSTERRLALARRARDADDLFG 337
Query: 428 IVTQSPN-IMDLVKCDGAALLYKNKIWRLGVTPNDF--QLHDIVSWLSE------YHMDS 478
+ + I L+ CDGA ++ + + DF Q +++ L YH D+
Sbjct: 338 ALAHPDDGIAALIPCDGALVMLGGRTLSIR---GDFERQAGNVLQRLQRDPERDIYHTDN 394
Query: 479 TGLSADSLYDAGYLGALALGDVVCGMAAVRISPKD--MIFWFRSQTASEVRWGGAKHEPD 536
++ D G CG+ A+R ++ IFWFR + +RWGG +P+
Sbjct: 395 WPQPSEDSPDGGD---------CCGVLAIRFHRQESGWIFWFRHEEVHRIRWGG---KPE 442
Query: 537 E----KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 579
+ G ++ PR SF+A+ EVV+ S PW + ++ L+L L
Sbjct: 443 KLLTIGPSGPRLTPRGSFEAWEEVVRGHSTPWSETDLAIAEKLRLDL 489
>sp|Q9RZA4|BPHY_DEIRA Bacteriophytochrome OS=Deinococcus radiodurans (strain ATCC 13939 /
DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
9279 / R1 / VKM B-1422) GN=bphP PE=1 SV=1
Length = 755
Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 230/524 (43%), Gaps = 72/524 (13%)
Query: 80 IQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDHPVLGIGSDIKTIFTAPSAS 139
IQP G LL D + +V+ S NA L G P + G + +
Sbjct: 35 IQPHGALLTADGHSGEVLQMSLNAATFL----------GQEPTVLRGQTLAALLPE-QWP 83
Query: 140 ALQKALGFG-------EVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPM 192
ALQ AL G +L P H + VHRV LI++FEP + ++
Sbjct: 84 ALQAALPPGCPDALQYRATLDWPAAGHLSLT-------VHRVGELLILEFEPTEAWD--S 134
Query: 193 TAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEV 252
T AL++ A L+S P+ + L + Q V ELTG+DRVM YKF D GEV
Sbjct: 135 TGPHALRNAMFA------LESAPN--LRALAEVATQTVRELTGFDRVMLYKFAPDATGEV 186
Query: 253 VSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV--LQDEKLPFDL 310
++E + GL +LG +PA+DIP AR L+ ++ +R+ D RA V + + + +
Sbjct: 187 IAEARREGLHAFLGHRFPASDIPAQARALYTRHLLRLTADTRAAAVPLDPVLNPQTNAPT 246
Query: 311 TLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNT 370
L G+ LRA H+QY+ NM +SL ++VVV + LWGL+ CH+
Sbjct: 247 PLGGAVLRATSPMHMQYLRNMGVGSSLSVSVVVGGQ--------------LWGLIACHHQ 292
Query: 371 TPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDMLMRDAPLGIVT 430
TP +P LR E+L ++ ++ V + + +++ +
Sbjct: 293 TPYVLPPDLRTTLEYLGRLLSLQVQVKEAADVAAFRQSLREHHARVALAAAHSLSPHDTL 352
Query: 431 QSP--NIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSE-----YHMDSTGLSA 483
P +++ L++ G L ++ + LG P + +++WL D+ G
Sbjct: 353 SDPALDLLGLMRAGGLILRFEGRWQTLGEVPPAPAVDALLAWLETQPGALVQTDALG--- 409
Query: 484 DSLYDAGYLGALALGDVVCGMAAVRISP--KDMIFWFRSQTASEVRWGGAKHEPDEKDDG 541
L+ AG L G+ A+ + + + W R + EV WGGA PD+ D
Sbjct: 410 -QLWPAGA----DLAPSAAGLLAISVGEGWSECLVWLRPELRLEVAWGGAT--PDQAKD- 461
Query: 542 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKD 585
+ PR SF +LE + + PW E++ L+ L A +
Sbjct: 462 -DLGPRHSFDTYLEEKRGYAEPWHPGEIEEAQDLRDTLTGALGE 504
>sp|Q55434|PHY2_SYNY3 Phytochrome-like protein cph2 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=cph2 PE=1 SV=1
Length = 1276
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 218 SMERLCDTMIQEVFELTGYDRVMAYKFHEDDHGEVVSE-ITKSGLEPYLGLHYPATDIPQ 276
++ +++E G DRV YKF D GEV++E + ++ L LGLH+P DIP
Sbjct: 23 TLRETLQVIVEEARIFLGVDRVKIYKFASDGSGEVLAEAVNRAALPSLLGLHFPVEDIPP 82
Query: 277 AARFLFMKNKVRMIVDCRARHVKVLQDEKLPFDLTLCGSTLRAPH---------SCHLQY 327
AR + + VD R K + L G H SCH+QY
Sbjct: 83 QAREELGNQRKMIAVDVAHRRKKSHE---------LSGRISPTEHSNGHYTTVDSCHIQY 133
Query: 328 MENMNSIASLVMAVVVNDEEEEGDNTLPQKRKRLWGLVVCHNTTPR 373
+ M ++SL + V+ + ++LWG++ H++ PR
Sbjct: 134 LLAMGVLSSLTVPVM--------------QDQQLWGIMAVHHSKPR 165
>sp|Q55E44|DHKE_DICDI Hybrid signal transduction histidine kinase E OS=Dictyostelium
discoideum GN=dhkE PE=3 SV=1
Length = 1699
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
Query: 871 ASHELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLL 930
A +L A R +E+ ++ L ++R P++GI+ S ++++G++L Q+ L
Sbjct: 651 AKKKLMIADQALRRAEELNQAKINFLTTVSHEVRTPINGILASVEILDGSQLDVTQRDFL 710
Query: 931 HTSAQCQRQLHKILDDS-DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIV 989
Q L ++ D D I G +L+ VEF L +L SI+ V + +GI ++
Sbjct: 711 SCIKQSADYLLDLITDILDFSKIEAGKFELDRVEFNLITMLEESINIVYRTAQERGIEVL 770
Query: 990 NETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQL 1040
+ L GD R++Q + +FLS +I F + GQ+MV S+ DQ+
Sbjct: 771 TFIDPDV-PIILIGDPYRVKQCVLNFLSNAIKFT-HKGQVMVKVSIV-DQI 818
>sp|Q9C5U2|AHK2_ARATH Histidine kinase 2 OS=Arabidopsis thaliana GN=AHK2 PE=1 SV=1
Length = 1176
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 85/169 (50%), Gaps = 8/169 (4%)
Query: 874 ELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTS 933
+ Q+ ++ +E + + + LA +IR P++G++ KM+ T+L A+Q T+
Sbjct: 570 DCQKMRELKARAEAADIAKSQFLATVSHEIRTPMNGVLGMLKMLMDTDLDAKQMDYAQTA 629
Query: 934 AQCQRQL----HKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIV 989
+ L +++LD + ++S G L+LE V F + +L S + K+N KGI +
Sbjct: 630 HGSGKDLTSLINEVLDQAKIES---GRLELENVPFDMRFILDNVSSLLSGKANEKGIELA 686
Query: 990 NETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKD 1038
+ Q+ + + GD R +Q++ + + SI F G + +S L +
Sbjct: 687 VYVSSQV-PDVVVGDPSRFRQIITNLVGNSIKFTQERGHIFISVHLADE 734
>sp|Q9C5U1|AHK3_ARATH Histidine kinase 3 OS=Arabidopsis thaliana GN=AHK3 PE=1 SV=1
Length = 1036
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 10/169 (5%)
Query: 880 HVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQ 939
+++ +E + + + LA +IR P++G++ M+ TEL Q+ + T+ +
Sbjct: 439 QLKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMDTELDVTQQDYVRTAQASGKA 498
Query: 940 L----HKILDDSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQ 995
L +++LD + ++S G L+LE V F L +L +S KS KG+ + +++
Sbjct: 499 LVSLINEVLDQAKIES---GKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDR 555
Query: 996 IMSETLYGDSIRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGQSV 1044
+ + L GD R +Q+L + + SI F G + V+ L D+L +S+
Sbjct: 556 V-PDMLIGDPGRFRQILTNLMGNSIKFTEK-GHIFVTVHLV-DELFESI 601
>sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase J OS=Dictyostelium
discoideum GN=dhkJ PE=3 SV=2
Length = 2062
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 6/177 (3%)
Query: 855 LDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKA----LAYTKRQIRNPLSGI 910
+D +G V + + H L++ L+++TA +A +A +IR P++GI
Sbjct: 1306 VDAKGEVNLLKLIINEMIHNLKETTLKNTLAKETAEAASRAKSDFMANMSHEIRTPMNGI 1365
Query: 911 IFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDS-DLDSIIDGYLDLEMVEFTLNEV 969
I + TEL AEQ+ L L I++D D I G L+L+ EF+L
Sbjct: 1366 IGMTDLTLDTELTAEQREYLSMVQSSAGSLLTIINDILDFSKIEAGRLELDQAEFSLRAH 1425
Query: 970 LVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISINFVPNG 1026
L ++ + +++ K I +V + A + ++L GD RL+Q++ + + +I F G
Sbjct: 1426 LYDALKTLSWRAHQKCIELVCDIASDV-PDSLIGDPGRLRQIVNNLVGNAIKFTSQG 1481
>sp|Q9C5U0|AHK4_ARATH Histidine kinase 4 OS=Arabidopsis thaliana GN=AHK4 PE=1 SV=1
Length = 1080
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 873 HELQQALHVQRLSEQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHT 932
HE+Q+ L V+ +E + + + LA +IR P++GI+ M+ TEL + Q+ T
Sbjct: 457 HEMQE-LKVR--AEAADVAKSQFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQT 513
Query: 933 SAQCQRQLHKILDDS-DLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNE 991
+ C + L ++++ D I G L+LE V F + +L +S +S K I +
Sbjct: 514 AQVCGKALIALINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVF 573
Query: 992 TAEQIMSETLYGDSIRLQQVLADFLSISINFVPNG 1026
++++ E + GDS R +Q++ + + S+ F G
Sbjct: 574 VSDKV-PEIVKGDSGRFRQIIINLVGNSVKFTEKG 607
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 374,036,149
Number of Sequences: 539616
Number of extensions: 15720409
Number of successful extensions: 38436
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 37992
Number of HSP's gapped (non-prelim): 167
length of query: 1052
length of database: 191,569,459
effective HSP length: 128
effective length of query: 924
effective length of database: 122,498,611
effective search space: 113188716564
effective search space used: 113188716564
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)