Query 001567
Match_columns 1052
No_of_seqs 512 out of 3611
Neff 8.4
Searched_HMMs 29240
Date Tue Mar 26 17:26:21 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001567.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_863-867//hhsearch_pdb/001567hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 1.0 1 1 328.1 48.4 447 10-571 9-478 (611)
2 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 312.7 44.5 430 20-571 614-1115(1249)
3 2ymu_A WD-40 repeat protein; u 1.0 1 1 309.9 57.7 463 19-570 14-496 (577)
4 1nr0_A Actin interacting prote 1.0 1 1 305.9 48.8 198 254-485 144-358 (611)
5 2ymu_A WD-40 repeat protein; u 1.0 1 1 290.9 49.9 443 20-569 56-536 (577)
6 3mkq_A Coatomer beta'-subunit; 1.0 1 1 288.6 56.1 424 21-571 15-459 (814)
7 1pgu_A Actin interacting prote 1.0 1 1 283.1 52.5 434 10-571 9-475 (615)
8 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 274.4 43.2 462 21-572 19-661 (902)
9 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 268.9 44.7 421 66-571 614-1073(1249)
10 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 252.0 41.2 438 22-528 61-659 (902)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=328.13 Aligned_cols=447 Identities=11% Similarity=0.078 Sum_probs=300.8
Q ss_pred EECCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEECCCCEEEEEEEECCHHHHHHCCCCCEEEECCCCCEEEEEECCC
Q ss_conf 00188898999862899863771999983890799514885047999861916665128521699967963999996894
Q 001567 10 VIPLEQGLCPSSQQIIYFKVNNGLLLIASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSL 89 (1052)
Q Consensus 10 ~~~~~~~~~~~~~~vv~fs~dg~lla~~~~~~v~IW~~~~~~~~l~~~~rs~~sl~~~G~n~~v~wsPDg~~Lav~T~dg 89 (1052)
.++-.|....+....++|+|||+++|++.++++.||+.. .......+. .+.+.+.+++|+|||++||+++.||
T Consensus 9 ~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~v~l~~~~-~~~~~~~~~------~h~~~v~~~~~spdg~~lasg~~d~ 81 (611)
T 1nr0_A 9 LFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVG-SLTDTEIYT------EHSHQTTVAKTSPSGYYCASGDVHG 81 (611)
T ss_dssp EECCCCCCCTTCCCCCEECTTSSEEEEEETTEEEEEETT-CSSCCEEEC------CCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCCCCCCCEEEEEECCCCCEEEECCCCEEEEECCC-CCCCCEEEC------CCCCCEEEEEECCCCCEEEEEECCC
T ss_conf 798999740682369766799997996799979994578-724273765------8998659999999996899994899
Q ss_pred EEEEEEEEECCCEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEE--EEECCCEEEEEECCC--CEEEEECCCCCCC
Q ss_conf 899999873674121179999984124575541120013336620888--753498399996389--1999943685566
Q 001567 90 YLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSN--IVSDNKHMLLGLSDG--SLYSISWKGEFYG 165 (1052)
Q Consensus 90 ~l~i~~i~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~v~~--i~~d~~~llv~t~dg--~i~~~~w~~~~~~ 165 (1052)
.++||++..+..... . .+..+...|.+ +.+++..++++..+. ...++.|+....
T Consensus 82 ~v~lWd~~~~~~~~~-----------~----------~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~- 139 (611)
T 1nr0_A 82 NVRIWDTTQTTHILK-----------T----------TIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS- 139 (611)
T ss_dssp EEEEEESSSTTCCEE-----------E----------EEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCB-
T ss_pred CEEEEECCCCCCEEE-----------E----------EECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCC-
T ss_conf 789948989841566-----------7----------622557844899989999979999899773669999638997-
Q ss_pred CEEECCCCCCCCCCEEECCCCCCCCEEECCCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEECCC-EEEEEECCCCEEE
Q ss_conf 301013678886301202468996301027997021244688861999996578635999960895-9999862794244
Q 001567 166 AFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQ-LMSCSVSKKGLKL 244 (1052)
Q Consensus 166 ~~~l~~~~~~~~~i~~i~~~~~~~l~s~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~-~~~~~~~d~~i~~ 244 (1052)
. ..+..+...|.++.| +|+|. .+++++.|+++++
T Consensus 140 -~----------------------------------~~l~gh~~~v~~v~f----------~p~~~~~l~s~s~D~~v~l 174 (611)
T 1nr0_A 140 -N----------------------------------GNLTGQARAMNSVDF----------KPSRPFRIISGSDDNTVAI 174 (611)
T ss_dssp -C----------------------------------BCCCCCSSCEEEEEE----------CSSSSCEEEEEETTSCEEE
T ss_pred -C----------------------------------CEECCCCCCCEEEEE----------CCCCCEEEEEEECCCEEEE
T ss_conf -6----------------------------------325478898369998----------8999829999928980999
Q ss_pred EEECCCCE---ECCCCCEE-EEEECCCCCEEEEEEECCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCC
Q ss_conf 11012321---06989809-999948998999995199499996688984049997313788889998835999987999
Q 001567 245 AEFIKIDK---ELGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNS 320 (1052)
Q Consensus 245 w~~~~~~~---~~gh~~~v-~va~sp~~~llAsGs~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~g~V~~l~wSpDg~ 320 (1052)
|+....+. +.+|.+.| +++|+|+++++|+|+.||+|++|++.+ +.....+.... ....+|.+.|.+++|+|||.
T Consensus 175 wd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~-g~~~~~~~~~~-~~~~~h~~~V~~v~~spdg~ 252 (611)
T 1nr0_A 175 FEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD-GTKTGVFEDDS-LKNVAHSGSVFGLTWSPDGT 252 (611)
T ss_dssp EETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEECBCTT-SSSCSSSSCEEEEEECTTSS
T ss_pred EECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCC-CCEEEEECCCC-CCCCCCCCCEEEEEECCCCC
T ss_conf 97999757665200257169999979999899998999199988999-82866513664-32356678789999979999
Q ss_pred EEEEEECCCCEEEEECCCCEEEEEECCCC--CCCEEEEEECCCCCCCCCCEEEEE---EEEEEECCCCEEEEEECCCCCC
Q ss_conf 79999869949999747885779854666--673220367389888855056500---2368805886599995289640
Q 001567 321 AFAVGWKSRGLTVWSVSGCRLMSTIRQIS--LSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRLYAIEEGSSER 395 (1052)
Q Consensus 321 ~Lasg~~Dg~i~vWs~~g~~l~~tl~~~~--~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~~~~l~~~~~~~~~~ 395 (1052)
+|++++.|+++++|++.++.+..++..+. ......+.+ ++ ..+++++ .+.+|+....+......+|...
T Consensus 253 ~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~ 326 (611)
T 1nr0_A 253 KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW--TK----QALVSISANGFINFVNPELGSIDQVRYGHNKA 326 (611)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE--CS----SCEEEEETTCCEEEEETTTTEEEEEECCCSSC
T ss_pred EEEEEECCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEE--CC----CEEEEEECCCCEEEEECCCCCCCEEECCCCCC
T ss_conf 9999908980999968887013440478876640689997--38----87999958996899968899744698378888
Q ss_pred EEEEEC---CCEEEEECCCCCEEEEEEEECCCEEEEEECCCCCHHEEEEECCCCCC-CCCCCCEEEEEECCCCCEEEEEE
Q ss_conf 999921---42465204699535667666585589970699650000220257100-26998679999926999999995
Q 001567 396 VLIFSF---GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSY-ISQNWPVQHVAASKDGMFLAVAG 471 (1052)
Q Consensus 396 I~~~~~---~k~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~p~~~-~~h~~~I~~va~SpdG~~lavag 471 (1052)
|..+.+ ++.+++++.|+++++|++..+.. ...+ .+|...|.++++++++ .+++++
T Consensus 327 v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~--------------------~~~~~~~h~~~v~~~~~s~~~-~l~s~s 385 (611)
T 1nr0_A 327 ITALSSSADGKTLFSADAEGHINSWDISTGIS--------------------NRVFPDVHATMITGIKTTSKG-DLFTVS 385 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCE--------------------EECSSCSCSSCEEEEEECTTS-CEEEEE
T ss_pred EEEEEEECCCCEEEEEECCCCEEEEECCCCCE--------------------EEECCCCCCCEEEEEEECCCC-CEEEEE
T ss_conf 89999918999899995898499997887925--------------------632166776507899987899-699998
Q ss_pred CCCEE-EEECCCCCEEEECCCCCEEEEEEEEEEEEC--CEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCC--CC
Q ss_conf 89649-999358938981674540234799988729--89999997518980789992288889862169865289--53
Q 001567 472 LHGLI-LYDIRQKKWRVFGDITQEQKIQSKGLLWLG--KIIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRKSLLA--KP 546 (1052)
Q Consensus 472 ~dG~i-iw~~~s~~wk~f~~~~~e~~~~v~gl~W~~--~~liv~~~~~~~~~~eLrly~~~~ld~~~~l~~~~~~s--~~ 546 (1052)
.|+.+ +|+..++....-............++.+.. ..+++++ ...+++|... . +....+.. ..
T Consensus 386 ~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~------~~~v~~~~~~-----~-~~~~~~~~~v~~ 453 (611)
T 1nr0_A 386 WDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC------YKHIAIYSHG-----K-LTEVPISYNSSC 453 (611)
T ss_dssp TTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE------SSEEEEEETT-----E-EEEEECSSCEEE
T ss_pred CCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEEEE------CCEEEEEECC-----C-EEEEECCCCCEE
T ss_conf 489668954688543565212001489970799807996999996------7639998489-----4-346406889549
Q ss_pred EEEEEECCEEEEEECCCEEEEEEEE
Q ss_conf 9998009989999828739999999
Q 001567 547 IVMDVYEDYILVTYRPFDVHIFHVK 571 (1052)
Q Consensus 547 l~~~~~~~~llv~~~d~~i~i~~~~ 571 (1052)
+.+++.+..+++.+.|+.+++|++.
T Consensus 454 va~spdg~~lasgs~D~~v~lwd~~ 478 (611)
T 1nr0_A 454 VALSNDKQFVAVGGQDSKVHVYKLS 478 (611)
T ss_dssp EEECTTSCEEEEEETTSEEEEEEEE
T ss_pred EEEECCCCEEEEECCCCEEEEEECC
T ss_conf 9992899899996899739999945
No 2
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=312.66 Aligned_cols=430 Identities=12% Similarity=0.156 Sum_probs=291.2
Q ss_pred CCCEE--EEEEECCEEEEEEC-CCCEEEEECCCCEEEEEEEECCHHHHHHCCCCCEEEECCCCCEEEEEECCCEEEEEEE
Q ss_conf 98628--99863771999983-8907995148850479998619166651285216999679639999968948999998
Q 001567 20 SSQQI--IYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKV 96 (1052)
Q Consensus 20 ~~~~v--v~fs~dg~lla~~~-~~~v~IW~~~~~~~~l~~~~rs~~sl~~~G~n~~v~wsPDg~~Lav~T~dg~l~i~~i 96 (1052)
+...| ++|||||+++|+++ +++|+||+.. .+..+..+. .+.+.+.+++|+||++.+|+++.||.+++|++
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~-~~~~~~~~~------~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAE-TGEKLLDIK------AHEDEVLCCAFSSDDSYIATCSADKKVKIWDS 686 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TCCEEEEEC------CCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CCCCEEEEEECCCCCEEEEEECCCEEEEEECC-CCCEEEEEC------CCCCCEEEEEEECCCCEEEEEECCCEEEEEEC
T ss_conf 66648999987999989999488949999989-997888760------67777899999269998999818995999877
Q ss_pred EECCCEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEE--C--CCEEEEEECCCCEEEEECCCCCCCCEEECCC
Q ss_conf 73674121179999984124575541120013336620888753--4--9839999638919999436855663010136
Q 001567 97 QITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVS--D--NKHMLLGLSDGSLYSISWKGEFYGAFELVHS 172 (1052)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~v~~i~~--d--~~~llv~t~dg~i~~~~w~~~~~~~~~l~~~ 172 (1052)
..+..... +..+...+.++.. + ...++.++.||.+.+|.++... ..
T Consensus 687 ~~~~~~~~-----------------------~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~--~~----- 736 (1249)
T 3sfz_A 687 ATGKLVHT-----------------------YDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE--CR----- 736 (1249)
T ss_dssp TTCCEEEE-----------------------EECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS--EE-----
T ss_pred CCCCEEEE-----------------------ECCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCC--HH-----
T ss_conf 99936899-----------------------9589973799998408996599998089709999899963--42-----
Q ss_pred CCCCCCCEEECCCCCCCCEEECCCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEECCCCE
Q ss_conf 78886301202468996301027997021244688861999996578635999960895999986279424411012321
Q 001567 173 SNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDK 252 (1052)
Q Consensus 173 ~~~~~~i~~i~~~~~~~l~s~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~i~~w~~~~~~~ 252 (1052)
.....+...+.++.| +++|+.+++++.|+++++|+......
T Consensus 737 -----------------------------~~~~~h~~~v~~~~~----------sp~~~~l~s~s~dg~v~vwd~~~~~~ 777 (1249)
T 3sfz_A 737 -----------------------------NTMFGHTNSVNHCRF----------SPDDELLASCSADGTLRLWDVRSANE 777 (1249)
T ss_dssp -----------------------------EEECCCSSCEEEEEE----------CSSTTEEEEEESSSEEEEEEGGGTEE
T ss_pred -----------------------------HEECCCCCCEEEEEE----------ECCCCEEEEEECCCEEEEEECCCCCC
T ss_conf -----------------------------201277797889999----------25999899997898599996888865
Q ss_pred E----------------CCCCCEE-EEEECCCCCEEEEEEECCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEEE
Q ss_conf 0----------------6989809-9999489989999951994999966889840499973137888899988359999
Q 001567 253 E----------------LGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAW 315 (1052)
Q Consensus 253 ~----------------~gh~~~v-~va~sp~~~llAsGs~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~g~V~~l~w 315 (1052)
. ..+...+ +++|+|+++.+++++ ++.+.+|++.+ +.....+.. +|.+.|.+++|
T Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~-~~~~~~~~~-------~~~~~v~~~~~ 848 (1249)
T 3sfz_A 778 RKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHT-SGLLAEIHT-------GHHSTIQYCDF 848 (1249)
T ss_dssp EEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTT-CCEEEEEEC-------SSSSCCCEEEE
T ss_pred CCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEC-CCCEEEEEECC-CCCEEEECC-------CCCCCEEEEEE
T ss_conf 5302023210246776445650179999978998899975-89599999568-972357747-------87776079998
Q ss_pred CCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEE---EEEEEECCCCE--------
Q ss_conf 8799979999869949999747885779854666673220367389888855056500---23688058865--------
Q 001567 316 TPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYR-------- 384 (1052)
Q Consensus 316 SpDg~~Lasg~~Dg~i~vWs~~g~~l~~tl~~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~~~~-------- 384 (1052)
+|+|..+++++.|+.+++|++.++....++.+| ...++++.|+|++ ..+++++ ++.+|+..+..
T Consensus 849 sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h-~~~v~~v~~spdg----~~l~s~s~dg~v~vw~~~~~~~~~~~~~~ 923 (1249)
T 3sfz_A 849 SPYDHLAVIALSQYCVELWNIDSRLKVADCRGH-LSWVHGVMFSPDG----SSFLTASDDQTIRVWETKKVCKNSAIVLK 923 (1249)
T ss_dssp CSSTTEEEEECSSSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTS----SEEEEEETTSCEEEEEHHHHHSCCSSSEE
T ss_pred CCCCCEEEEEECCCEEEEEECCCCCEEEECCCC-CCCEEEEEECCCC----CEEEEEECCCEEEEEECCCCCEEEEECCC
T ss_conf 278888999947986999986789565322787-6656899998999----98999958972898874665201021133
Q ss_pred ------------------------EEEEECC-----CCCCE--EEEEC-CCEEEEECCCCCEEEEEEEECCCEEEEEECC
Q ss_conf ------------------------9999528-----96409--99921-4246520469953566766658558997069
Q 001567 385 ------------------------LYAIEEG-----SSERV--LIFSF-GKCCLNRGVSGMTYARQVIYGEDRLLVVQSE 432 (1052)
Q Consensus 385 ------------------------l~~~~~~-----~~~~I--~~~~~-~k~~~s~s~d~~~~~w~~~~~~~~~~~~~~~ 432 (1052)
.+....+ +...+ .++++ ++.+++++.++.+.+|++..+..
T Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~-------- 995 (1249)
T 3sfz_A 924 QEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRV-------- 995 (1249)
T ss_dssp EEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSC--------
T ss_pred CEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCE--------
T ss_conf 103689759986899813776248984476508972567278999958997799986999889997578723--------
Q ss_pred CCCHHEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEE-EEECCCCCEEEECCCCCEEEEEEEEEEEECC-EEE
Q ss_conf 96500002202571002699867999992699999999589649-9993589389816745402347999887298-999
Q 001567 433 DTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQKKWRVFGDITQEQKIQSKGLLWLGK-IIV 510 (1052)
Q Consensus 433 ~~~~~~w~~~~~p~~~~~h~~~I~~va~SpdG~~lavag~dG~i-iw~~~s~~wk~f~~~~~e~~~~v~gl~W~~~-~li 510 (1052)
...+.+|..+|++++|+|||+++++++.||.+ +|++.+++...+. ...-.+..+.|..+ .++
T Consensus 996 ------------~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~----~~~~~v~~~~~~~~~~l~ 1059 (1249)
T 3sfz_A 996 ------------FSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQ----AHQETVKDFRLLQDSRLL 1059 (1249)
T ss_dssp ------------EEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCB----CCSSCEEEEEECSSSEEE
T ss_pred ------------EEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEE----CCCCCEEEEEECCCCCEE
T ss_conf ------------4430367771689999899998999869987999987999668985----278738999990899589
Q ss_pred EEEEECCCCEEEEEEEECCCCCCCCEEEEEE---CCCCCEEEEEECCEEEEEECCCEEEEEEEE
Q ss_conf 9997518980789992288889862169865---289539998009989999828739999999
Q 001567 511 VCNYIDSSNTYELLFYPRYHLDQSSLLCRKS---LLAKPIVMDVYEDYILVTYRPFDVHIFHVK 571 (1052)
Q Consensus 511 v~~~~~~~~~~eLrly~~~~ld~~~~l~~~~---~~s~~l~~~~~~~~llv~~~d~~i~i~~~~ 571 (1052)
++ +.+..+++|+... ........ -+-..+.+++.+..+++.+.|+.+.+|++.
T Consensus 1060 ~~-----~~dg~v~vwd~~~---~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~ 1115 (1249)
T 3sfz_A 1060 SW-----SFDGTVKVWNVIT---GRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFD 1115 (1249)
T ss_dssp EE-----ESSSEEEEEETTT---TCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSS
T ss_pred EE-----ECCCCEEEEECCC---CCEEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEECC
T ss_conf 99-----7889689988898---86558874668848999998999989998499948998789
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=309.90 Aligned_cols=463 Identities=16% Similarity=0.194 Sum_probs=318.7
Q ss_pred CCCCEE--EEEEECCEEEEEEC-CCCEEEEECCCCEEEEEEEECCHHHHHHCCCCCEEEECCCCCEEEEEECCCEEEEEE
Q ss_conf 998628--99863771999983-890799514885047999861916665128521699967963999996894899999
Q 001567 19 PSSQQI--IYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFK 95 (1052)
Q Consensus 19 ~~~~~v--v~fs~dg~lla~~~-~~~v~IW~~~~~~~~l~~~~rs~~sl~~~G~n~~v~wsPDg~~Lav~T~dg~l~i~~ 95 (1052)
+|...| ++|||||+++|+++ +++|+||+.. +..+..+. .+.+.+.+++|+||+++||+++.||.+++|+
T Consensus 14 GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~--~~~~~~l~------gh~~~V~~l~fspdg~~las~~~d~~i~vWd 85 (577)
T 2ymu_A 14 AHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTLT------GHSSSVWGVAFSPDGQTIASASDDKTVKLWN 85 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECTT--SCEEEEEE------CCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCEEEEEECC--CCEEEEEE------CCCCCEEEEEECCCCCEEEEEECCCEEEEEE
T ss_conf 899857999998998999999389989999799--97899996------8989989999989999999996989799998
Q ss_pred EEECCCEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEEE--EEEECCCEEEEEECCCCEEEEECCCCCCCCEEECCCC
Q ss_conf 87367412117999998412457554112001333662088--8753498399996389199994368556630101367
Q 001567 96 VQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVS--NIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSS 173 (1052)
Q Consensus 96 i~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~v~--~i~~d~~~llv~t~dg~i~~~~w~~~~~~~~~l~~~~ 173 (1052)
+. +..... +.++...|. ++.+++..++.+..++.+..+.......... .
T Consensus 86 ~~-~~~~~~-----------------------~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~-----~ 136 (577)
T 2ymu_A 86 RN-GQLLQT-----------------------LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL-----T 136 (577)
T ss_dssp TT-SCEEEE-----------------------ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEE-----C
T ss_pred CC-CCEEEE-----------------------EECCCCCEEEEEECCCCCEEEEECCCCCEEECCCCCCEEEEC-----C
T ss_conf 99-978999-----------------------978999889999989999899980798335202355200110-----4
Q ss_pred CCCCCCEEECCCCCCCCEEECCCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEECCC--C
Q ss_conf 88863012024689963010279970212446888619999965786359999608959999862794244110123--2
Q 001567 174 NDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKI--D 251 (1052)
Q Consensus 174 ~~~~~i~~i~~~~~~~l~s~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~i~~w~~~~~--~ 251 (1052)
.....+....++.+............... +................-..+.+++||+.+++++.++.+++|+.... .
T Consensus 137 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~ 215 (577)
T 2ymu_A 137 GHSSSVWGVAFSPDGQTIASASDDKTVKL-WNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQ 215 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEE-ECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEE
T ss_pred CCCCCEEEEEEECCCCCCEECCCCCCEEC-CCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEE
T ss_conf 77774355542037763200255531000-00000000002687763566541699778999859998999949996899
Q ss_pred EECCCCCEE-EEEECCCCCEEEEEEECCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCC
Q ss_conf 106989809-9999489989999951994999966889840499973137888899988359999879997999986994
Q 001567 252 KELGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRG 330 (1052)
Q Consensus 252 ~~~gh~~~v-~va~sp~~~llAsGs~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~g~V~~l~wSpDg~~Lasg~~Dg~ 330 (1052)
...+|...+ +++|+|+++++++|+.||+|++|+.. ++.+..+.+ |.++|.+++|+|||..+++++.|+.
T Consensus 216 ~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~--~~~~~~~~~--------~~~~v~~v~~~~d~~~l~~~~~d~~ 285 (577)
T 2ymu_A 216 TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTG--------HSSSVNGVAFRPDGQTIASASDDKT 285 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT--SCEEEEECC--------CSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECC--CCEEEEEEC--------CCCCEEEEEECCCCCEEEEEECCCE
T ss_conf 994688988999997999999999189989999599--979999806--------8898799999689999999959997
Q ss_pred EEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEE---EEEEEECCCCEEEEEECCCCCCEEEE--EC-CCE
Q ss_conf 9999747885779854666673220367389888855056500---23688058865999952896409999--21-424
Q 001567 331 LTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRLYAIEEGSSERVLIF--SF-GKC 404 (1052)
Q Consensus 331 i~vWs~~g~~l~~tl~~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~~~~l~~~~~~~~~~I~~~--~~-~k~ 404 (1052)
+++|+..+. ...++.+| ...+.+++++|++ ..+++++ ++++|+..+.++. ...+|...+..+ ++ ++.
T Consensus 286 i~~w~~~~~-~~~~~~~h-~~~v~~~~~~~~~----~~l~t~~~d~~i~~w~~~~~~~~-~~~~~~~~v~~~~~s~~g~~ 358 (577)
T 2ymu_A 286 VKLWNRNGQ-LLQTLTGH-SSSVWGVAFSPDG----QTIASASDDKTVKLWNRNGQHLQ-TLTGHSSSVWGVAFSPDGQT 358 (577)
T ss_dssp EEEEETTSC-EEEEECCC-SSCEEEEEECTTS----SEEEEEETTSCEEEEETTSCEEE-EECCCSSCEEEEEECTTSSE
T ss_pred EEEEECCCC-EEEEEECC-CCCEEEEEECCCC----CEEEEEECCCEEEEEECCCCEEE-EEECCCCCEEEEEECCCCCE
T ss_conf 999948995-89997068-8976999999999----99999969995999969997257-87478897799999899999
Q ss_pred EEEECCCCCEEEEEEEECCCEEEEEECCCCCHHEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEE-EEECCCC
Q ss_conf 652046995356676665855899706996500002202571002699867999992699999999589649-9993589
Q 001567 405 CLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQK 483 (1052)
Q Consensus 405 ~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~p~~~~~h~~~I~~va~SpdG~~lavag~dG~i-iw~~~s~ 483 (1052)
+++++.++.+++|+. .+.. ...+.+|..+|++++|+|||+++++++.||.+ +|+....
T Consensus 359 l~~~~~dg~v~~~~~-~~~~--------------------~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~ 417 (577)
T 2ymu_A 359 IASASDDKTVKLWNR-NGQL--------------------LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ 417 (577)
T ss_dssp EEEEETTSEEEEEET-TCCE--------------------EEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCC
T ss_pred EEEEECCCEEEEECC-CCCE--------------------EEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCC
T ss_conf 999969998999908-9978--------------------9985278897489999899999999949998999969997
Q ss_pred CEEEECCCCCEEEEEEEEEEEE--CCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEE-EECCCCC--EEEEEECCEEEE
Q ss_conf 3898167454023479998872--9899999975189807899922888898621698-6528953--999800998999
Q 001567 484 KWRVFGDITQEQKIQSKGLLWL--GKIIVVCNYIDSSNTYELLFYPRYHLDQSSLLCR-KSLLAKP--IVMDVYEDYILV 558 (1052)
Q Consensus 484 ~wk~f~~~~~e~~~~v~gl~W~--~~~liv~~~~~~~~~~eLrly~~~~ld~~~~l~~-~~~~s~~--l~~~~~~~~llv 558 (1052)
..+.+.. +. -.+.++.|. +..++++ ..+..+++|+.. . ..+.. ......+ +.+++.+..+++
T Consensus 418 ~~~~~~~--~~--~~v~~~~~s~d~~~l~~~-----~~d~~v~~w~~~---~-~~~~~~~~~~~~v~~~~~spd~~~las 484 (577)
T 2ymu_A 418 LLQTLTG--HS--SSVWGVAFSPDDQTIASA-----SDDKTVKLWNRN---G-QLLQTLTGHSSSVRGVAFSPDGQTIAS 484 (577)
T ss_dssp EEEEEEC--CS--SCEEEEEECTTSSEEEEE-----ETTSEEEEEETT---S-CEEEEEECCSSCEEEEEECTTSCEEEE
T ss_pred EEEEECC--CC--CCEEEEEECCCCCEEEEE-----CCCCEEEEEECC---C-CEEEEECCCCCCEEEEEECCCCCEEEE
T ss_conf 8989628--89--975799998999999999-----399989999799---9-889997278997789999699999999
Q ss_pred EECCCEEEEEEE
Q ss_conf 982873999999
Q 001567 559 TYRPFDVHIFHV 570 (1052)
Q Consensus 559 ~~~d~~i~i~~~ 570 (1052)
.+.|+.+++|+.
T Consensus 485 ~~~d~~i~iw~~ 496 (577)
T 2ymu_A 485 ASDDKTVKLWNR 496 (577)
T ss_dssp EETTSEEEEEET
T ss_pred EECCCEEEEECC
T ss_conf 919897999939
No 4
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=305.88 Aligned_cols=198 Identities=15% Similarity=0.184 Sum_probs=83.3
Q ss_pred CCCCCEE-EEEECCCCC-EEEEEEECCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCE
Q ss_conf 6989809-999948998-99999519949999668898404999731378888999883599998799979999869949
Q 001567 254 LGSGDAV-CASIAPEQQ-ILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGL 331 (1052)
Q Consensus 254 ~gh~~~v-~va~sp~~~-llAsGs~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~g~V~~l~wSpDg~~Lasg~~Dg~i 331 (1052)
.+|.+.| +++|+|++. .+++|+.|++|++|+... .+...++.+ |.+.|.+++|+|||++||+|+.|+++
T Consensus 144 ~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-~~~~~~l~~--------H~~~V~~v~fspdg~~las~s~D~~i 214 (611)
T 1nr0_A 144 TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-FKFKSTFGE--------HTKFVHSVRYNPDGSLFASTGGDGTI 214 (611)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-BEEEEEECC--------CSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCC-CEEEEEECC--------CCCCEEEEEECCCCCEEEEEECCCCE
T ss_conf 478898369998899982999992898099997999-757665200--------25716999997999989999899919
Q ss_pred EEEECCCCEEEEEEC-------CCCCCCEEEEEECCCCCCCCCCEEEEE---EEEEEECCCCEEEEEECCC---CCCEEE
Q ss_conf 999747885779854-------666673220367389888855056500---2368805886599995289---640999
Q 001567 332 TVWSVSGCRLMSTIR-------QISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRLYAIEEGS---SERVLI 398 (1052)
Q Consensus 332 ~vWs~~g~~l~~tl~-------~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~~~~l~~~~~~~---~~~I~~ 398 (1052)
++|+...+....++. +| ...|.+++|+|++ ..+++++ ++++|+...+++......+ ......
T Consensus 215 ~lwd~~~g~~~~~~~~~~~~~~~h-~~~V~~v~~spdg----~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~ 289 (611)
T 1nr0_A 215 VLYNGVDGTKTGVFEDDSLKNVAH-SGSVFGLTWSPDG----TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLG 289 (611)
T ss_dssp EEEETTTCCEEEECBCTTSSSCSS-SSCEEEEEECTTS----SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEE
T ss_pred EEEECCCCCEEEEECCCCCCCCCC-CCCEEEEEECCCC----CEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCEEEE
T ss_conf 998899982866513664323566-7878999997999----99999908980999968887013440478876640689
Q ss_pred EEC-CCEEEEECCCCCEEEEEEEECCCEEEEEECCCCCHHEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEE-
Q ss_conf 921-424652046995356676665855899706996500002202571002699867999992699999999589649-
Q 001567 399 FSF-GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI- 476 (1052)
Q Consensus 399 ~~~-~k~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~p~~~~~h~~~I~~va~SpdG~~lavag~dG~i- 476 (1052)
+.+ ++.+++++.|+.+++|+...+.. ...+.+|..+|++++|+|||++|++++.||.+
T Consensus 290 ~~~~~~~l~s~s~d~~i~~~~~~~~~~--------------------~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~ 349 (611)
T 1nr0_A 290 IIWTKQALVSISANGFINFVNPELGSI--------------------DQVRYGHNKAITALSSSADGKTLFSADAEGHIN 349 (611)
T ss_dssp EEECSSCEEEEETTCCEEEEETTTTEE--------------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEECCCEEEEEECCCCEEEEECCCCCC--------------------CEEECCCCCCEEEEEEECCCCEEEEEECCCCEE
T ss_conf 997388799995899689996889974--------------------469837888889999918999899995898499
Q ss_pred EEECCCCCE
Q ss_conf 999358938
Q 001567 477 LYDIRQKKW 485 (1052)
Q Consensus 477 iw~~~s~~w 485 (1052)
+|++.+++.
T Consensus 350 ~Wd~~~~~~ 358 (611)
T 1nr0_A 350 SWDISTGIS 358 (611)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCCE
T ss_conf 997887925
No 5
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=290.94 Aligned_cols=443 Identities=17% Similarity=0.222 Sum_probs=199.8
Q ss_pred CCCEE--EEEEECCEEEEEEC-CCCEEEEECCCCEEEEEEEECCHHHHHHCCCCCEEEECCCCCEEEEEECCCEEEEEEE
Q ss_conf 98628--99863771999983-8907995148850479998619166651285216999679639999968948999998
Q 001567 20 SSQQI--IYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKV 96 (1052)
Q Consensus 20 ~~~~v--v~fs~dg~lla~~~-~~~v~IW~~~~~~~~l~~~~rs~~sl~~~G~n~~v~wsPDg~~Lav~T~dg~l~i~~i 96 (1052)
+...| ++|+||+++||+++ +++|+||+.. . ..+..+.. +.+.+.+++|+||++.|++++.++.+++|+.
T Consensus 56 h~~~V~~l~fspdg~~las~~~d~~i~vWd~~-~-~~~~~~~~------~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~ 127 (577)
T 2ymu_A 56 HSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-G-QLLQTLTG------HSSSVRGVAFSPDGQTIASASDDKTVKLWNR 127 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETT-S-CEEEEECC------CSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCEEEEEECCCCCEEEEEECCCEEEEEECC-C-CEEEEEEC------CCCCEEEEEECCCCCEEEEECCCCCEEECCC
T ss_conf 98998999998999999999698979999899-9-78999978------9998899999899998999807983352023
Q ss_pred EECCCEEECCCCCC---------CCCEEEEE------EE---EECCCCCCCCCCCEEEE--EEECCCEEEEEECCCCEEE
Q ss_conf 73674121179999---------98412457------55---41120013336620888--7534983999963891999
Q 001567 97 QITEKSIQIGGKQP---------SGLFFIKI------SL---VLNEQLPFAEKGLSVSN--IVSDNKHMLLGLSDGSLYS 156 (1052)
Q Consensus 97 ~~~~~~~~~~~~~~---------~~~~l~~~------~l---~~~~~~~~~~~~~~v~~--i~~d~~~llv~t~dg~i~~ 156 (1052)
....... ..++.. ....+... .+ ..............+.+ +.+++..++.++.++.+.+
T Consensus 128 ~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~ 206 (577)
T 2ymu_A 128 NGQLLQT-LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKL 206 (577)
T ss_dssp TCCEEEE-ECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred CCCEEEE-CCCCCCCEEEEEEECCCCCCEECCCCCCEECCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEE
T ss_conf 5520011-047777435554203776320025553100000000000002687763566541699778999859998999
Q ss_pred EECCCCCCCCEEECCCCCCCCCCEEECCCCCCCCEEECCCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEE
Q ss_conf 94368556630101367888630120246899630102799702124468886199999657863599996089599998
Q 001567 157 ISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCS 236 (1052)
Q Consensus 157 ~~w~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~l~s~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~ 236 (1052)
|..+++... .+ ..+...+.++ ++++||+.++++
T Consensus 207 w~~~~~~~~--~~-----------------------------------~~~~~~v~~~----------~~s~dg~~l~~~ 239 (577)
T 2ymu_A 207 WNRNGQLLQ--TL-----------------------------------TGHSSSVRGV----------AFSPDGQTIASA 239 (577)
T ss_dssp ECTTSCEEE--EE-----------------------------------ECCSSCEEEE----------EECTTSSCEEEE
T ss_pred EECCCCEEE--EE-----------------------------------ECCCCCEEEE----------EECCCCCEEEEE
T ss_conf 949996899--99-----------------------------------4688988999----------997999999999
Q ss_pred ECCCCEEEEEECCC--CEECCCCCEE-EEEECCCCCEEEEEEECCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEE
Q ss_conf 62794244110123--2106989809-99994899899999519949999668898404999731378888999883599
Q 001567 237 VSKKGLKLAEFIKI--DKELGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCI 313 (1052)
Q Consensus 237 ~~d~~i~~w~~~~~--~~~~gh~~~v-~va~sp~~~llAsGs~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~g~V~~l 313 (1052)
+.++.+++|+.... ....+|...+ +++|+|+++.+++++.|++|++|+.. ++....+.+ |.++|.++
T Consensus 240 ~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~--~~~~~~~~~--------h~~~v~~~ 309 (577)
T 2ymu_A 240 SDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN--GQLLQTLTG--------HSSSVWGV 309 (577)
T ss_dssp ETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT--SCEEEEECC--------CSSCEEEE
T ss_pred ECCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECC--CCEEEEEEC--------CCCCEEEE
T ss_conf 18998999959997999980688987999996899999999599979999489--958999706--------88976999
Q ss_pred EECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEE---EEEEEECCCCEEEEEEC
Q ss_conf 998799979999869949999747885779854666673220367389888855056500---23688058865999952
Q 001567 314 AWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRLYAIEE 390 (1052)
Q Consensus 314 ~wSpDg~~Lasg~~Dg~i~vWs~~g~~l~~tl~~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~~~~l~~~~~ 390 (1052)
+|+|||..+++++.|+.+++|+..+.. ..++.+| ...+.+++++|++ ..+++|. .+.+|+..+ +++....
T Consensus 310 ~~~~~~~~l~t~~~d~~i~~w~~~~~~-~~~~~~~-~~~v~~~~~s~~g----~~l~~~~~dg~v~~~~~~~-~~~~~~~ 382 (577)
T 2ymu_A 310 AFSPDGQTIASASDDKTVKLWNRNGQH-LQTLTGH-SSSVWGVAFSPDG----QTIASASDDKTVKLWNRNG-QLLQTLT 382 (577)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTSCE-EEEECCC-SSCEEEEEECTTS----SEEEEEETTSEEEEEETTC-CEEEEEE
T ss_pred EECCCCCEEEEEECCCEEEEEECCCCE-EEEEECC-CCCEEEEEECCCC----CEEEEEECCCEEEEECCCC-CEEEEEC
T ss_conf 999999999999699959999699972-5787478-8977999998999----9999996999899990899-7899852
Q ss_pred CCCCCEEEE--EC-CCEEEEECCCCCEEEEEEEECCCEEEEEECCCCCHHEEEEECCCCCCCCCCCCEEEEEECCCCCEE
Q ss_conf 896409999--21-424652046995356676665855899706996500002202571002699867999992699999
Q 001567 391 GSSERVLIF--SF-GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFL 467 (1052)
Q Consensus 391 ~~~~~I~~~--~~-~k~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~p~~~~~h~~~I~~va~SpdG~~l 467 (1052)
+|...|..+ ++ ++.+++++.|+.+++|+. .+. ....+.+|..+|.+++|+||++++
T Consensus 383 ~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~--------------------~~~~~~~~~~~v~~~~~s~d~~~l 441 (577)
T 2ymu_A 383 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQ--------------------LLQTLTGHSSSVWGVAFSPDDQTI 441 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCC--------------------EEEEEECCSSCEEEEEECTTSSEE
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCC--------------------EEEEECCCCCCEEEEEECCCCCEE
T ss_conf 78897489999899999999949998999969-997--------------------898962889975799998999999
Q ss_pred EEEECCCEE-EEECCCCCEEEECCCCCEEEEEEEEEEEE--CCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEC-C
Q ss_conf 999589649-99935893898167454023479998872--9899999975189807899922888898621698652-8
Q 001567 468 AVAGLHGLI-LYDIRQKKWRVFGDITQEQKIQSKGLLWL--GKIIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRKSL-L 543 (1052)
Q Consensus 468 avag~dG~i-iw~~~s~~wk~f~~~~~e~~~~v~gl~W~--~~~liv~~~~~~~~~~eLrly~~~~ld~~~~l~~~~~-~ 543 (1052)
++++.||.+ +|+...+..+.+.. +. ..+..++|. +.+++++ ..+..+++|+.. . ..+..... .
T Consensus 442 ~~~~~d~~v~~w~~~~~~~~~~~~--~~--~~v~~~~~spd~~~las~-----~~d~~i~iw~~~---~-~~~~~~~~h~ 508 (577)
T 2ymu_A 442 ASASDDKTVKLWNRNGQLLQTLTG--HS--SSVRGVAFSPDGQTIASA-----SDDKTVKLWNRN---G-QLLQTLTGHS 508 (577)
T ss_dssp EEEETTSEEEEEETTSCEEEEEEC--CS--SCEEEEEECTTSCEEEEE-----ETTSEEEEEETT---S-CEEEEEECCS
T ss_pred EEECCCCEEEEEECCCCEEEEECC--CC--CCEEEEEECCCCCEEEEE-----ECCCEEEEECCC---C-CEEEEEECCC
T ss_conf 999399989999799988999727--89--977899996999999999-----198979999399---9-7899986799
Q ss_pred CCC--EEEEEECCEEEEEECCCEEEEEE
Q ss_conf 953--99980099899998287399999
Q 001567 544 AKP--IVMDVYEDYILVTYRPFDVHIFH 569 (1052)
Q Consensus 544 s~~--l~~~~~~~~llv~~~d~~i~i~~ 569 (1052)
..+ +.+++.+.+++....|+.+++|+
T Consensus 509 ~~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 509 SSVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCEEEEEECCCCCEEEEEECCCEEEEEE
T ss_conf 9989999918999999998969999996
No 6
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=1.00 E-value=1 Score=288.64 Aligned_cols=424 Identities=14% Similarity=0.173 Sum_probs=279.7
Q ss_pred CCEEEEEEECCEEEEEEC-CCCEEEEECCCCEEEEEEEECCHHHHHHCCCCCEEEECCCCCEEEEEECCCEEEEEEEEEC
Q ss_conf 862899863771999983-8907995148850479998619166651285216999679639999968948999998736
Q 001567 21 SQQIIYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQIT 99 (1052)
Q Consensus 21 ~~~vv~fs~dg~lla~~~-~~~v~IW~~~~~~~~l~~~~rs~~sl~~~G~n~~v~wsPDg~~Lav~T~dg~l~i~~i~~~ 99 (1052)
....++|+||++++|+++ ++.|.||+.. .+..+..+.. +.+.+.++.|+||++.||+++.+|.+++|++..+
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~-~~~~~~~~~~------~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 87 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYE-TQVEVRSIQV------TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETT-TTEEEEEEEC------CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred CEEEEEECCCCCEEEEEECCCEEEEEECC-CCCEEEEEEC------CCCCEEEEEEECCCCEEEEEECCCEEEEEECCCC
T ss_conf 56899988999989999479989999899-9916778733------8996889999689998999928994999989999
Q ss_pred CCEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEE--EEECCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCC
Q ss_conf 74121179999984124575541120013336620888--7534983999963891999943685566301013678886
Q 001567 100 EKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSN--IVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSS 177 (1052)
Q Consensus 100 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~v~~--i~~d~~~llv~t~dg~i~~~~w~~~~~~~~~l~~~~~~~~ 177 (1052)
...... ..+...+.+ +.+++..+++++.+|.+.+|.++.......
T Consensus 88 ~~~~~~-----------------------~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~---------- 134 (814)
T 3mkq_A 88 EKVVDF-----------------------EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ---------- 134 (814)
T ss_dssp CEEEEE-----------------------ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEE----------
T ss_pred CEEEEE-----------------------ECCCCCEEEEEEECCCCEEEEECCCCEEEEEECCCCCEEEE----------
T ss_conf 587998-----------------------16899789999958999899992899899998999954879----------
Q ss_pred CCEEECCCCCCCCEEECCCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEE-CCCEEEEEECCCCEEEEEECCCCEE---
Q ss_conf 301202468996301027997021244688861999996578635999960-8959999862794244110123210---
Q 001567 178 VAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYS-NGQLMSCSVSKKGLKLAEFIKIDKE--- 253 (1052)
Q Consensus 178 ~i~~i~~~~~~~l~s~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~-dG~~~~~~~~d~~i~~w~~~~~~~~--- 253 (1052)
....+...+.++.| ++ +|..+++++.++++++|+.......
T Consensus 135 -------------------------~~~~~~~~v~~~~~----------~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 179 (814)
T 3mkq_A 135 -------------------------TFEGHEHFVMCVAF----------NPKDPSTFASGCLDRTVKVWSLGQSTPNFTL 179 (814)
T ss_dssp -------------------------EEECCSSCEEEEEE----------ETTEEEEEEEEETTSEEEEEETTCSSCSEEE
T ss_pred -------------------------EECCCCCCEEEEEE----------ECCCCCEEEEEECCCEEEEEECCCCCCEEEE
T ss_conf -------------------------98379986889999----------7699999999948894999989999610698
Q ss_pred -CCCCCEE-EEEECC--CCCEEEEEEECCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCC
Q ss_conf -6989809-999948--998999995199499996688984049997313788889998835999987999799998699
Q 001567 254 -LGSGDAV-CASIAP--EQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSR 329 (1052)
Q Consensus 254 -~gh~~~v-~va~sp--~~~llAsGs~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~g~V~~l~wSpDg~~Lasg~~Dg 329 (1052)
.++...+ +++|+| ++.++++|+.||+|++|++.+ +....++.. |.+.|.+++|+|+|.++++++.||
T Consensus 180 ~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~dg 250 (814)
T 3mkq_A 180 TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-KSCVATLEG--------HMSNVSFAVFHPTLPIIISGSEDG 250 (814)
T ss_dssp ECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT-TEEEEEEEC--------CSSCEEEEEECSSSSEEEEEETTS
T ss_pred ECCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCC-CCEEEEECC--------CCCCEEEEEECCCCCEEEEEECCC
T ss_conf 35888977999999779998999993899799999999-918899847--------888878999859999999990899
Q ss_pred CEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEE--EEEEEECCCCEEEEEECCCCCCEEEEEC-CCEEE
Q ss_conf 49999747885779854666673220367389888855056500--2368805886599995289640999921-42465
Q 001567 330 GLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT--SMMQWDEYGYRLYAIEEGSSERVLIFSF-GKCCL 406 (1052)
Q Consensus 330 ~i~vWs~~g~~l~~tl~~~~~~~v~s~~~sp~~~~~~~~l~sg~--~~~~W~~~~~~l~~~~~~~~~~I~~~~~-~k~~~ 406 (1052)
.+++|+..++....++..+ ...+.+++++|++. ...++++. .+.+|...... ....+++ ++.+.
T Consensus 251 ~v~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~g~~~~ 317 (814)
T 3mkq_A 251 TLKIWNSSTYKVEKTLNVG-LERSWCIATHPTGR--KNYIASGFDNGFTVLSLGNDE----------PTLSLDPVGKLVW 317 (814)
T ss_dssp CEEEEETTTCSEEEEECCS-SSSEEEEEECTTCG--GGEEEEEETTEEEEEECSCCS----------CCEEECSSSEEEE
T ss_pred EEEEEECCCCCEEEEEECC-CCCEEEEEECCCCC--CEEEEEEECCCEEEEECCCCC----------CEEEECCCCCEEE
T ss_conf 6999989999477784068-88679999924999--509999907987999767997----------4167779987899
Q ss_pred EECCCCCEEEEEEEECCCEEEEEECCCCCHHEEEEECC-CCCCCCCCCCEEEEEECCCCCEEEEEECCCEE-EEECCCCC
Q ss_conf 20469953566766658558997069965000022025-71002699867999992699999999589649-99935893
Q 001567 407 NRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNL-PVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQKK 484 (1052)
Q Consensus 407 s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~-p~~~~~h~~~I~~va~SpdG~~lavag~dG~i-iw~~~s~~ 484 (1052)
+++.+............. ..+.. ....... ......+...+++++|+|||+++++++ +|.+ +|++...+
T Consensus 318 ~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~ 388 (814)
T 3mkq_A 318 SGGKNAAASDIFTAVIRG------NEEVE--QDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWR 388 (814)
T ss_dssp ECCTTSCTTCEEEEECCS------CCCCC--SSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTE
T ss_pred ECCCCCCCEEEEEEECCC------CCCCC--CCCCCEEEEECCCCCCCCCCEEEECCCCCEEEEEC-CCEEEEEECCCCC
T ss_conf 776366411246653046------55555--67620146511788765774068999999899942-9889999874544
Q ss_pred EEEECCCCCEEEEEEEEEEEE--CCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEC---CEEEEE
Q ss_conf 898167454023479998872--989999997518980789992288889862169865289539998009---989999
Q 001567 485 WRVFGDITQEQKIQSKGLLWL--GKIIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRKSLLAKPIVMDVYE---DYILVT 559 (1052)
Q Consensus 485 wk~f~~~~~e~~~~v~gl~W~--~~~liv~~~~~~~~~~eLrly~~~~ld~~~~l~~~~~~s~~l~~~~~~---~~llv~ 559 (1052)
-... ..+..+.|. ++.++++ +.+..+++|....-....+ ..+.+++.+ ..++..
T Consensus 389 ~~~~--------~~i~~~~~spdg~~la~~-----~~~g~v~l~~~~~~~~~~v--------~~~~~s~dg~~~~~l~~~ 447 (814)
T 3mkq_A 389 NKAF--------GKCQDFVWGPDSNSYALI-----DETGQIKYYKNFKEVTSWS--------VPMHSAIDRLFSGALLGV 447 (814)
T ss_dssp EEEE--------EECSEEEECTTSSCEEEE-----CTTCCEEEEETTEECTTCC--------CCCSSCCCEEECSSSEEE
T ss_pred CCCC--------CCEEEEEEECCCCEEEEE-----ECCCCEEEEECCCCCCCEE--------ECCCCCCCCEECCEEEEE
T ss_conf 5679--------954799994799859999-----6898399997777752439--------737867552365469999
Q ss_pred ECCCEEEEEEEE
Q ss_conf 828739999999
Q 001567 560 YRPFDVHIFHVK 571 (1052)
Q Consensus 560 ~~d~~i~i~~~~ 571 (1052)
..|+.+.+|++.
T Consensus 448 ~~d~~v~~~d~~ 459 (814)
T 3mkq_A 448 KSDGFVYFFDWD 459 (814)
T ss_dssp EETTEEEEECTT
T ss_pred ECCCEEEEEECC
T ss_conf 669989999987
No 7
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=283.06 Aligned_cols=434 Identities=9% Similarity=0.088 Sum_probs=292.4
Q ss_pred EECCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEECCCCE----EEEEEEECCHHHHHHCCC-CCEEEECC--CCCEE
Q ss_conf 001888989998628998637719999838907995148850----479998619166651285-21699967--96399
Q 001567 10 VIPLEQGLCPSSQQIIYFKVNNGLLLIASPCHIELWSSSQHK----VRLGKYKRDSESVQREGE-NLQAVWSP--DTKLI 82 (1052)
Q Consensus 10 ~~~~~~~~~~~~~~vv~fs~dg~lla~~~~~~v~IW~~~~~~----~~l~~~~rs~~sl~~~G~-n~~v~wsP--Dg~~L 82 (1052)
+++..+.........++|+|||+++|+++++.+.||+.. .+ .....+. .+.+. +.+++|+| |++.|
T Consensus 9 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~-~~~~~~~~~~~~~------~h~~~~v~~~~~sp~~~~~~l 81 (615)
T 1pgu_A 9 IIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLD-DGDSKVPPVVQFT------GHGSSVVTTVKFSPIKGSQYL 81 (615)
T ss_dssp EECCCCCCCTTCCCCCEEETTTTEEEEEETTEEEEEECC-SSCCSSCSEEEEC------TTTTSCEEEEEECSSTTCCEE
T ss_pred CCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEECC-CCCCCCCCCEEEE------CCCCCEEEEEEECCCCCCCEE
T ss_conf 159998776585368998899997999359849999777-8877651431880------578844999997967899889
Q ss_pred EEEECCCEEEEEEEEECCCEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEE--EEECCCEEEEEECCC--CEEEEE
Q ss_conf 9996894899999873674121179999984124575541120013336620888--753498399996389--199994
Q 001567 83 AVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSN--IVSDNKHMLLGLSDG--SLYSIS 158 (1052)
Q Consensus 83 av~T~dg~l~i~~i~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~v~~--i~~d~~~llv~t~dg--~i~~~~ 158 (1052)
|+++.+|.+++|++..+...... -. .....+..+...+.+ +.+++..+++++.+. ...++.
T Consensus 82 ~s~~~dg~v~vw~~~~~~~~~~~---------~~------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~ 146 (615)
T 1pgu_A 82 CSGDESGKVIVWGWTFDKESNSV---------EV------NVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFIS 146 (615)
T ss_dssp EEEETTSEEEEEEEEEEGGGTEE---------EE------EEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEE
T ss_pred EEECCCCEEEEEECCCCCCCCCC---------CC------CCCCHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEE
T ss_conf 99648987999768887655445---------54------2000111256637999990799989993168777557999
Q ss_pred CCCCCCCCEEECCCCCCCCCCEEECCCCCCCCEEECCCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEECCC-EEEEEE
Q ss_conf 3685566301013678886301202468996301027997021244688861999996578635999960895-999986
Q 001567 159 WKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQ-LMSCSV 237 (1052)
Q Consensus 159 w~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~l~s~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~-~~~~~~ 237 (1052)
|+... .. .....+...+.++.| +++|+ .+++++
T Consensus 147 ~d~~~--~~----------------------------------~~~~~~~~~v~~~~~----------~~~~~~~l~~~~ 180 (615)
T 1pgu_A 147 WDSGN--SL----------------------------------GEVSGHSQRINACHL----------KQSRPMRSMTVG 180 (615)
T ss_dssp TTTCC--EE----------------------------------EECCSCSSCEEEEEE----------CSSSSCEEEEEE
T ss_pred EECCC--CC----------------------------------EEEECCCCCEEEEEE----------CCCCCCEEEEEE
T ss_conf 97898--10----------------------------------313067743889998----------878996899995
Q ss_pred CCCCEEEEEECCCCEE---CCCCC---EE-EEEECCC-CCEEEEEEECCEEEEEECCCCCCEEEEE-E---EECCCCCCC
Q ss_conf 2794244110123210---69898---09-9999489-9899999519949999668898404999-7---313788889
Q 001567 238 SKKGLKLAEFIKIDKE---LGSGD---AV-CASIAPE-QQILAVGTRRGVVELYDLAESASLIRTV-S---LYDWGYSMD 305 (1052)
Q Consensus 238 ~d~~i~~w~~~~~~~~---~gh~~---~v-~va~sp~-~~llAsGs~Dg~V~vwd~~~~~~~~~~l-~---~~~~~~~~~ 305 (1052)
.++.+++|+....+.. .+|.+ .+ +++|+|+ ++++++|+.||.|++|++.+ ++.+..+ . .
T Consensus 181 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~-------- 251 (615)
T 1pgu_A 181 DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKS-GEFLKYIEDDQEP-------- 251 (615)
T ss_dssp TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTT-CCEEEECCBTTBC--------
T ss_pred CCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEECCC-CCEEEEECCCCCC--------
T ss_conf 7995999969996101320256777742899997897788899986898089998999-9785895254445--------
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCC---CCCEEEEEECCCCCCCCCCEEEEE---EEEEEE
Q ss_conf 99883599998799979999869949999747885779854666---673220367389888855056500---236880
Q 001567 306 DTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQIS---LSSISSPIVKPNQDCKYEPLMSGT---SMMQWD 379 (1052)
Q Consensus 306 h~g~V~~l~wSpDg~~Lasg~~Dg~i~vWs~~g~~l~~tl~~~~---~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~ 379 (1052)
|.++|.+++|+ ++.++++++.|+.+++|++..+....++..+. ...+.++.+. ++ ..++++. .+.+|+
T Consensus 252 ~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~l~~~~~~g~i~~~d 325 (615)
T 1pgu_A 252 VQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GN----GRIISLSLDGTLNFYE 325 (615)
T ss_dssp CCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ET----TEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEEC-CCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEEC-CC----CEEEEEECCCCEEEEE
T ss_conf 67755899981-899799984899489997888927878847877545714699918-99----7699997899789998
Q ss_pred CCCCEEEEEECCCCCCEEEEECCCEEEEECCCCCEEEEEEEECCCEEEEEECCCCCHHEEEEECCCCCCCCCCCCEEEEE
Q ss_conf 58865999952896409999214246520469953566766658558997069965000022025710026998679999
Q 001567 380 EYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVA 459 (1052)
Q Consensus 380 ~~~~~l~~~~~~~~~~I~~~~~~k~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~p~~~~~h~~~I~~va 459 (1052)
....+.+....+|...|..+.+ ..+++++.|+.+++|++. . .. .+|..+|.+++
T Consensus 326 ~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~----~-------------------~~--~~~~~~v~~~~ 379 (615)
T 1pgu_A 326 LGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSS----S-------------------MH--QDHSNLIVSLD 379 (615)
T ss_dssp TTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTT----E-------------------EE--CCCCSCEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEE-CCCEEECCCCEEEEEECH----H-------------------HC--CCCCCCEEEEE
T ss_conf 8899288999477787899995-674898799959998752----4-------------------15--75568517999
Q ss_pred ECCCCCEEEEEECCCEE-EEECCCCCEEEECCCCCEEEEEEEEEEEECC-EEEEEEEECCCCEEEEEEEECCCCCCCCEE
Q ss_conf 92699999999589649-9993589389816745402347999887298-999999751898078999228888986216
Q 001567 460 ASKDGMFLAVAGLHGLI-LYDIRQKKWRVFGDITQEQKIQSKGLLWLGK-IIVVCNYIDSSNTYELLFYPRYHLDQSSLL 537 (1052)
Q Consensus 460 ~SpdG~~lavag~dG~i-iw~~~s~~wk~f~~~~~e~~~~v~gl~W~~~-~liv~~~~~~~~~~eLrly~~~~ld~~~~l 537 (1052)
+ +++..+++++.+|.+ +|++.+++... ....+.+..+ .+++.+ ....+++|... ....+
T Consensus 380 ~-~~~~~l~~~~~d~~i~~~~~~~~~~~~----------~~~~~~~s~~~~~~~~~-----~~~~~~~~~~~---~~~~~ 440 (615)
T 1pgu_A 380 N-SKAQEYSSISWDDTLKVNGITKHEFGS----------QPKVASANNDGFTAVLT-----NDDDLLILQSF---TGDII 440 (615)
T ss_dssp C-CSTTCCEEEETTTEEEETTEEEEECSS----------CEEEEEECSSSEEEEEE-----TTSEEEEEETT---TCCEE
T ss_pred E-CCCCEEEEEECCCCEEEEECCCCCCCC----------CCEEEEECCCCCEEEEE-----CCCCEEEEECC---CCCEE
T ss_conf 7-898679999589979998866676367----------84699982898789996-----79826999446---78665
Q ss_pred EEEECCCCCEEEEEECCEEEEEEC-CCEEEEEEEE
Q ss_conf 986528953999800998999982-8739999999
Q 001567 538 CRKSLLAKPIVMDVYEDYILVTYR-PFDVHIFHVK 571 (1052)
Q Consensus 538 ~~~~~~s~~l~~~~~~~~llv~~~-d~~i~i~~~~ 571 (1052)
........+..+...++.+++.+. |+.+++|++.
T Consensus 441 ~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~ 475 (615)
T 1pgu_A 441 KSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLS 475 (615)
T ss_dssp EEEECSSCEEEEEECSSEEEEEETTTSCEEEEETT
T ss_pred EECCCCCCCEEEEECCCEEEEEECCCCEEEEEECC
T ss_conf 55156787207788388899965689869999888
No 8
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=274.37 Aligned_cols=462 Identities=12% Similarity=0.095 Sum_probs=274.7
Q ss_pred CCEEEEEEECCEEEEEEC-CCCEEEEECCCCEEEEEEEECCHHHHHHCCCCCEEEECCCCCEEEEEECCCEEEEEEEEEC
Q ss_conf 862899863771999983-8907995148850479998619166651285216999679639999968948999998736
Q 001567 21 SQQIIYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQIT 99 (1052)
Q Consensus 21 ~~~vv~fs~dg~lla~~~-~~~v~IW~~~~~~~~l~~~~rs~~sl~~~G~n~~v~wsPDg~~Lav~T~dg~l~i~~i~~~ 99 (1052)
....++|+||+++||+++ +++|+||+.. ....+.. +.+.+.+.+++|+| +++|++++.|+.+++|++..+
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~-~~~~~~~-------~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQ-QVEVVIK-------LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ 89 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECST-TCEEEEE-------CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC
T ss_pred CCEEEEECCCCCEEEEEECCCEEEEEECC-CCEEEEE-------CCCCCCEEEEEECC-CCEEEEEECCCEEEEEECCCC
T ss_conf 84899997999989999297989999689-9479998-------68999779999908-988999989595999989999
Q ss_pred CCEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEE--EEECCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCC
Q ss_conf 74121179999984124575541120013336620888--7534983999963891999943685566301013678886
Q 001567 100 EKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSN--IVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSS 177 (1052)
Q Consensus 100 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~v~~--i~~d~~~llv~t~dg~i~~~~w~~~~~~~~~l~~~~~~~~ 177 (1052)
.. +..+ . ....|.+ +.++++.+++++.||.+++|..+......+.+.
T Consensus 90 ~~-------------~~~~--~---------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~------- 138 (902)
T 2oaj_A 90 KV-------------LTTV--F---------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLD------- 138 (902)
T ss_dssp SE-------------EEEE--E---------CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEEC-------
T ss_pred CE-------------EEEE--C---------CCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCEEC-------
T ss_conf 68-------------9997--4---------899879999879999899994999299999999962650304-------
Q ss_pred CCEEECCCCCCCCEEECCCCCEEE-CCCCCCCCCEEEEEECCCCCEEEEEEEC-CCEEEEEECCCCEEEEEECCCCEE--
Q ss_conf 301202468996301027997021-2446888619999965786359999608-959999862794244110123210--
Q 001567 178 VAALSHHFPSNGLASVDTSGAFVS-DHKFPISSAIIWLELCLPMRLLFVLYSN-GQLMSCSVSKKGLKLAEFIKIDKE-- 253 (1052)
Q Consensus 178 ~i~~i~~~~~~~l~s~~~~~~~~~-~~~~~~~~~i~~i~~~~~~~~~~~~s~d-G~~~~~~~~d~~i~~w~~~~~~~~-- 253 (1052)
. . ... .....+...|.++.| +|+ +..+++++.++++ +|+....+..
T Consensus 139 ----------~-~--------~~~~~~~~~h~~~V~sl~~----------sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~ 188 (902)
T 2oaj_A 139 ----------N-L--------QKSSFFPAARLSPIVSIQW----------NPRDIGTVLISYEYVTL-TYSLVENEIKQS 188 (902)
T ss_dssp ----------C-H--------HHHHTCSSSCCCCCCEEEE----------ETTEEEEEEEECSSCEE-EEETTTTEEEEE
T ss_pred ----------C-C--------CCCCCCCCCCCCCEEEEEE----------CCCCCCEEEEEECCCCE-EEECCCCCEEEE
T ss_conf ----------3-2--------1000254457897389997----------66999989999189849-998778965799
Q ss_pred -CC------------------CCCEE-EEEECCCCCEEEEEEECCEEEEEECCCCCCEEEEEEEECCCC----------C
Q ss_conf -69------------------89809-999948998999995199499996688984049997313788----------8
Q 001567 254 -LG------------------SGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGY----------S 303 (1052)
Q Consensus 254 -~g------------------h~~~v-~va~sp~~~llAsGs~Dg~V~vwd~~~~~~~~~~l~~~~~~~----------~ 303 (1052)
.+ |...| +++|+|++.+||+|+.||+|++||+.+ ++.+......+... .
T Consensus 189 ~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~-g~~~~~r~l~~~~~~~~~~~~~~~~ 267 (902)
T 2oaj_A 189 FIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS-GHMIMARTVFETEINVPQPDYIRDS 267 (902)
T ss_dssp ECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT-CCEEEEECSSCSCTTSCCTTCCCCC
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCC-CCEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 833557767776544332345677768999859999999998999399998789-9688888501234578777678888
Q ss_pred CCCCCCEEEEEEC----CCC-CEEEEEECC-----CCEEEEECC------------------CCEEEEEECCCCCCCEEE
Q ss_conf 8999883599998----799-979999869-----949999747------------------885779854666673220
Q 001567 304 MDDTGPVSCIAWT----PDN-SAFAVGWKS-----RGLTVWSVS------------------GCRLMSTIRQISLSSISS 355 (1052)
Q Consensus 304 ~~h~g~V~~l~wS----pDg-~~Lasg~~D-----g~i~vWs~~------------------g~~l~~tl~~~~~~~v~s 355 (1052)
..|.++|.+++|+ ||+ ..+++|+.| +.+.+|++. .......+...+...+.+
T Consensus 268 ~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~ 347 (902)
T 2oaj_A 268 STNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVN 347 (902)
T ss_dssp SSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEE
T ss_pred CCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCEEE
T ss_conf 55567745799973499988789996887777888528999547898755542556546641745227874189995479
Q ss_pred EEECCCCC------CCCCCEEEEE---EEEEEECCCCEEEEE--------------------------------------
Q ss_conf 36738988------8855056500---236880588659999--------------------------------------
Q 001567 356 PIVKPNQD------CKYEPLMSGT---SMMQWDEYGYRLYAI-------------------------------------- 388 (1052)
Q Consensus 356 ~~~sp~~~------~~~~~l~sg~---~~~~W~~~~~~l~~~-------------------------------------- 388 (1052)
+.+.++.. .+...++.++ ++.+|+...+.....
T Consensus 348 ~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~ 427 (902)
T 2oaj_A 348 ILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNK 427 (902)
T ss_dssp EEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCC
T ss_pred EEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCC
T ss_conf 99977889886778785069999179848999789998556555689852235897248999974999998888604699
Q ss_pred ---ECCCCCCE--EEEEC-CCEEEEECCCCCEEEEEEEECCCEEEEEECCCCCHHEEEEECCC-CCCCCCCCCEEEEEEC
Q ss_conf ---52896409--99921-42465204699535667666585589970699650000220257-1002699867999992
Q 001567 389 ---EEGSSERV--LIFSF-GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLP-VSYISQNWPVQHVAAS 461 (1052)
Q Consensus 389 ---~~~~~~~I--~~~~~-~k~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~p-~~~~~h~~~I~~va~S 461 (1052)
..+|...+ +.+++ ++.+++++.|+++++|++..+..+. . .... ..+. ....+|...|++++||
T Consensus 428 ~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~--------~-~~~~-~~l~~~~~~~h~~~V~svafs 497 (902)
T 2oaj_A 428 DYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQD--------N-ASFE-VNLSRTLNKAKELAVDKISFA 497 (902)
T ss_dssp CCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTT--------T-BCEE-EEHHHHTTCSSSCCEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCC--------C-CEEE-EECHHHCCCCCCCCEEEEEEC
T ss_conf 97545785778753336667589996589838999787764567--------7-3677-501541377888764699963
Q ss_pred CCCCEEEEEECCCEE-EEECCCCCEE-------------------------------------------EECCCCCEEEE
Q ss_conf 699999999589649-9993589389-------------------------------------------81674540234
Q 001567 462 KDGMFLAVAGLHGLI-LYDIRQKKWR-------------------------------------------VFGDITQEQKI 497 (1052)
Q Consensus 462 pdG~~lavag~dG~i-iw~~~s~~wk-------------------------------------------~f~~~~~e~~~ 497 (1052)
|||++||+|+.||.+ +|++.+++.. .... .+...-
T Consensus 498 pdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-l~~h~~ 576 (902)
T 2oaj_A 498 AETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTA-VHANKG 576 (902)
T ss_dssp TTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEE-ECCCSC
T ss_pred CCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEE-EECCCC
T ss_conf 8999699994585799999248655575455778665113455134679654322423689887776014699-986888
Q ss_pred EEEEEEEECC-EEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEE-------CCCCC--EEEE-----EEC---CEEEEE
Q ss_conf 7999887298-9999997518980789992288889862169865-------28953--9998-----009---989999
Q 001567 498 QSKGLLWLGK-IIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRKS-------LLAKP--IVMD-----VYE---DYILVT 559 (1052)
Q Consensus 498 ~v~gl~W~~~-~liv~~~~~~~~~~eLrly~~~~ld~~~~l~~~~-------~~s~~--l~~~-----~~~---~~llv~ 559 (1052)
.|..+++..+ +++++ +.+..+++|+.. ...++.+.. +...+ +.++ +++ ..++..
T Consensus 577 ~V~svafSpdG~lAsg-----s~D~tv~lwd~~---~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sg 648 (902)
T 2oaj_A 577 KTSAINNSNIGFVGIA-----YAAGSLMLIDRR---GPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCG 648 (902)
T ss_dssp SEEEEEECBTSEEEEE-----ETTSEEEEEETT---TTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEE
T ss_pred CEEEEEECCCCEEEEE-----ECCCCEEEEECC---CCEEEEEEEHHHHCCCCCCCEEEEEEEEEECCCCCCCCEEEEEE
T ss_conf 6779996487689999-----589769999888---98399970246726466661399999998417898763389999
Q ss_pred ECCCEEEEEEEEE
Q ss_conf 8287399999998
Q 001567 560 YRPFDVHIFHVKL 572 (1052)
Q Consensus 560 ~~d~~i~i~~~~~ 572 (1052)
+.|+.+++|++..
T Consensus 649 s~D~tv~~wd~~p 661 (902)
T 2oaj_A 649 TDMGEVITYKILP 661 (902)
T ss_dssp ETTSEEEEEEEEE
T ss_pred ECCCCEEEEEEEC
T ss_conf 5687399999955
No 9
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=268.87 Aligned_cols=421 Identities=15% Similarity=0.125 Sum_probs=290.9
Q ss_pred HCCCCCEEEECCCCCEEEEEECCCEEEEEEEEECCCEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEE--EECCC
Q ss_conf 1285216999679639999968948999998736741211799999841245755411200133366208887--53498
Q 001567 66 REGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNI--VSDNK 143 (1052)
Q Consensus 66 ~~G~n~~v~wsPDg~~Lav~T~dg~l~i~~i~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~v~~i--~~d~~ 143 (1052)
+.+.+.+++|+||++.+|+++.||.+++|++..+..... +.++...|.++ .++++
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~-----------------------~~~h~~~v~~~~~s~~~~ 670 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLD-----------------------IKAHEDEVLCCAFSSDDS 670 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE-----------------------ECCCSSCEEEEEECTTSS
T ss_pred CCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEE-----------------------ECCCCCCEEEEEEECCCC
T ss_conf 666489999879999899994889499999899978887-----------------------606777789999926999
Q ss_pred EEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCCCEEECCCCCCCCEEECCCCCEEECCCCCCCCCEEEEEECCCCCEE
Q ss_conf 39999638919999436855663010136788863012024689963010279970212446888619999965786359
Q 001567 144 HMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLL 223 (1052)
Q Consensus 144 ~llv~t~dg~i~~~~w~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~l~s~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 223 (1052)
.+++++.||.+.+|.+... ... .....+...+.++.|++.
T Consensus 671 ~l~s~~~d~~v~vwd~~~~--~~~----------------------------------~~~~~~~~~v~~~~~~~~---- 710 (1249)
T 3sfz_A 671 YIATCSADKKVKIWDSATG--KLV----------------------------------HTYDEHSEQVNCCHFTNK---- 710 (1249)
T ss_dssp EEEEEETTSEEEEEETTTC--CEE----------------------------------EEEECCSSCEEEEEECSS----
T ss_pred EEEEEECCCEEEEEECCCC--CEE----------------------------------EEECCCCCCEEEEEEECC----
T ss_conf 8999818995999877999--368----------------------------------999589973799998408----
Q ss_pred EEEEECCCEEEEEECCCCEEEEEECCCCEE---CCCCCEE-EEEECCCCCEEEEEEECCEEEEEECCCCCCEEEEEEEEC
Q ss_conf 999608959999862794244110123210---6989809-999948998999995199499996688984049997313
Q 001567 224 FVLYSNGQLMSCSVSKKGLKLAEFIKIDKE---LGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYD 299 (1052)
Q Consensus 224 ~~~s~dG~~~~~~~~d~~i~~w~~~~~~~~---~gh~~~v-~va~sp~~~llAsGs~Dg~V~vwd~~~~~~~~~~l~~~~ 299 (1052)
.++.++++++.|+.+++|+...++.. .+|.+.+ +++|+|+++++++|+.||+|++|++.+ +.....+....
T Consensus 711 ----~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~-~~~~~~~~~~~ 785 (1249)
T 3sfz_A 711 ----SNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRS-ANERKSINVKR 785 (1249)
T ss_dssp ----SSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGG-TEEEEEEECCC
T ss_pred ----CCCEEEEEEECCCEEEEEECCCCCHHHEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCC-CCCCCEECCCC
T ss_conf ----9965999980897099998999634220127779788999925999899997898599996888-86553020232
Q ss_pred CCC-----CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEE-
Q ss_conf 788-----88999883599998799979999869949999747885779854666673220367389888855056500-
Q 001567 300 WGY-----SMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT- 373 (1052)
Q Consensus 300 ~~~-----~~~h~g~V~~l~wSpDg~~Lasg~~Dg~i~vWs~~g~~l~~tl~~~~~~~v~s~~~sp~~~~~~~~l~sg~- 373 (1052)
... .......+.+++|+|||..+++++ ++.+.+|+..++.....+...+...+.++.|+|++ ..++++.
T Consensus 786 ~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~----~~l~~~~~ 860 (1249)
T 3sfz_A 786 FFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD----HLAVIALS 860 (1249)
T ss_dssp CC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST----TEEEEECS
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEC-CCCEEEEEECCCCCEEEECCCCCCCEEEEEECCCC----CEEEEEEC
T ss_conf 10246776445650179999978998899975-89599999568972357747877760799982788----88999947
Q ss_pred --EEEEEECCCCEEEEEECCCCCCEEEEEC---CCEEEEECCCCCEEEEEEEECCC-----------------EEEEE-E
Q ss_conf --2368805886599995289640999921---42465204699535667666585-----------------58997-0
Q 001567 374 --SMMQWDEYGYRLYAIEEGSSERVLIFSF---GKCCLNRGVSGMTYARQVIYGED-----------------RLLVV-Q 430 (1052)
Q Consensus 374 --~~~~W~~~~~~l~~~~~~~~~~I~~~~~---~k~~~s~s~d~~~~~w~~~~~~~-----------------~~~~~-~ 430 (1052)
.+.+|+...+.......+|...|..+.+ ++.+++++.|+.+++|++..... ...+. .
T Consensus 861 dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (1249)
T 3sfz_A 861 QYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAV 940 (1249)
T ss_dssp SSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEE
T ss_pred CCEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEE
T ss_conf 98699998678956532278766568999989999899995897289887466520102113310368975998689981
Q ss_pred CCCCCHHEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEE-EEECCCCCEEEECCCCCEEEEEEEEEEEE--CC
Q ss_conf 6996500002202571002699867999992699999999589649-99935893898167454023479998872--98
Q 001567 431 SEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQKKWRVFGDITQEQKIQSKGLLWL--GK 507 (1052)
Q Consensus 431 ~~~~~~~~w~~~~~p~~~~~h~~~I~~va~SpdG~~lavag~dG~i-iw~~~s~~wk~f~~~~~e~~~~v~gl~W~--~~ 507 (1052)
........+... .......+..++.+++++|+|+++++|+.+|.+ +|++.+++...... .+. ..+.++.|. ++
T Consensus 941 ~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~-~h~--~~v~~l~~s~dg~ 1016 (1249)
T 3sfz_A 941 DNIRGLQLIAGK-TGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGV-GHK--KAVRHIQFTADGK 1016 (1249)
T ss_dssp ESSSSEEEEEES-SCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECC-CCS--SCCCCEEECSSSS
T ss_pred CCCCCEEEEECC-CCEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEECC-CCC--CCEEEEEECCCCC
T ss_conf 377624898447-650897256727899995899779998699988999757872344303-677--7168999989999
Q ss_pred EEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEE-CCEEEEEECCCEEEEEEEE
Q ss_conf 999999751898078999228888986216986528953999800-9989999828739999999
Q 001567 508 IIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRKSLLAKPIVMDVY-EDYILVTYRPFDVHIFHVK 571 (1052)
Q Consensus 508 ~liv~~~~~~~~~~eLrly~~~~ld~~~~l~~~~~~s~~l~~~~~-~~~llv~~~d~~i~i~~~~ 571 (1052)
+++++ +.+..+++|+.. .............+..+... ++.+++...|+.+.+|++.
T Consensus 1017 ~l~s~-----~~dg~i~vwd~~---~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~ 1073 (1249)
T 3sfz_A 1017 TLISS-----SEDSVIQVWNWQ---TGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVI 1073 (1249)
T ss_dssp CEEEE-----CSSSBEEEEETT---TTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETT
T ss_pred EEEEE-----CCCCEEEEEECC---CCCEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEECC
T ss_conf 89998-----699879999879---9966898527873899999089958999788968998889
No 10
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=252.05 Aligned_cols=438 Identities=10% Similarity=0.026 Sum_probs=223.8
Q ss_pred CEEEEEEECCEEEEEEC-CCCEEEEECCCCEEEEEEEECCHHHHHHCCCCCEEEECCCCCEEEEEECCCEEEEEEEEECC
Q ss_conf 62899863771999983-89079951488504799986191666512852169996796399999689489999987367
Q 001567 22 QQIIYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITE 100 (1052)
Q Consensus 22 ~~vv~fs~dg~lla~~~-~~~v~IW~~~~~~~~l~~~~rs~~sl~~~G~n~~v~wsPDg~~Lav~T~dg~l~i~~i~~~~ 100 (1052)
...++|+| |++|++++ +++|+||+.. .+..+..+. +.+.+.+++|+||++.+++++.+|.+++|++....
T Consensus 61 V~~l~fsp-g~~L~S~s~D~~v~lWd~~-~~~~~~~~~-------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~ 131 (902)
T 2oaj_A 61 IKEMRFVK-GIYLVVINAKDTVYVLSLY-SQKVLTTVF-------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQ 131 (902)
T ss_dssp EEEEEEET-TTEEEEEETTCEEEEEETT-TCSEEEEEE-------CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTE
T ss_pred EEEEEECC-CCEEEEEECCCEEEEEECC-CCCEEEEEC-------CCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCC
T ss_conf 79999908-9889999895959999899-996899974-------89987999987999989999499929999999996
Q ss_pred CEEECCCCCCCCCEEEEEEEEECCC-CCCCCCCCEEEEEEECC---CEEEEEECCCCEEEEECCCCCCCCE-EECCCCCC
Q ss_conf 4121179999984124575541120-01333662088875349---8399996389199994368556630-10136788
Q 001567 101 KSIQIGGKQPSGLFFIKISLVLNEQ-LPFAEKGLSVSNIVSDN---KHMLLGLSDGSLYSISWKGEFYGAF-ELVHSSND 175 (1052)
Q Consensus 101 ~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~~~~~v~~i~~d~---~~llv~t~dg~i~~~~w~~~~~~~~-~l~~~~~~ 175 (1052)
...+. +. ..... ....++...|.+++... ..++++..+|.+ +|+.... ... .+. .+
T Consensus 132 ~~~~~---------i~----~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~--~~~~~~~---~~ 192 (902)
T 2oaj_A 132 LSSFK---------LD----NLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVEN--EIKQSFI---YE 192 (902)
T ss_dssp EEEEE---------EC----CHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTT--EEEEEEC---CC
T ss_pred CCCCE---------EC----CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCE-EEECCCC--CEEEEEE---CC
T ss_conf 26503---------04----32100025445789738999766999989999189849-9987789--6579983---35
Q ss_pred CCCCEEECCCCCCCCEEECCCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEECCCCEEC-
Q ss_conf 8630120246899630102799702124468886199999657863599996089599998627942441101232106-
Q 001567 176 SSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKEL- 254 (1052)
Q Consensus 176 ~~~i~~i~~~~~~~l~s~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~i~~w~~~~~~~~~- 254 (1052)
. ..+. .... ... .....+...|.++.| ++||+.+++++.|+++++|+...++...
T Consensus 193 ~--------~~g~---~~~~-~~~--~~~~~h~~~V~~v~f----------spdg~~lasgs~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 193 L--------PPFA---PGGD-FSE--KTNEKRTPKVIQSLY----------HPNSLHIITIHEDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp B--------CTTC---CCST-TCC--CTTSCBCCCEEEEEE----------CTTSSEEEEEETTCCEEEEETTTCCEEEE
T ss_pred C--------CCCC---CCCC-CCC--CCCCCCCCCEEEEEE----------CCCCCEEEEEECCCEEEEEECCCCCEEEE
T ss_conf 5--------7767---7765-443--323456777689998----------59999999998999399998789968888
Q ss_pred -------C-------------CCCEE-EEEEC----CCC-CEEEEEEEC-----CEEEEEECCCC---------------
Q ss_conf -------9-------------89809-99994----899-899999519-----94999966889---------------
Q 001567 255 -------G-------------SGDAV-CASIA----PEQ-QILAVGTRR-----GVVELYDLAES--------------- 288 (1052)
Q Consensus 255 -------g-------------h~~~v-~va~s----p~~-~llAsGs~D-----g~V~vwd~~~~--------------- 288 (1052)
+ |...| +++|+ |++ .++++|+.| .++.+|++...
T Consensus 249 r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~ 328 (902)
T 2oaj_A 249 RTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYY 328 (902)
T ss_dssp ECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 85012345787776788885556774579997349998878999688777788852899954789875554255654664
Q ss_pred --CCEEEEEEEECCCCCCCCCCCEEEEEECC----------CCCEEEEEECCCCEEEEECCCCEEEEE-------ECCC-
Q ss_conf --84049997313788889998835999987----------999799998699499997478857798-------5466-
Q 001567 289 --ASLIRTVSLYDWGYSMDDTGPVSCIAWTP----------DNSAFAVGWKSRGLTVWSVSGCRLMST-------IRQI- 348 (1052)
Q Consensus 289 --~~~~~~l~~~~~~~~~~h~g~V~~l~wSp----------Dg~~Lasg~~Dg~i~vWs~~g~~l~~t-------l~~~- 348 (1052)
....+.+.. .+.+.|.++.+.| |+..+++++.|+.+++|++..+..... +..|
T Consensus 329 ~~~~~~~~~~~-------~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~ 401 (902)
T 2oaj_A 329 ANPKQMKIFPL-------PTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLR 401 (902)
T ss_dssp HSCSEEEEECC-------SSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBT
T ss_pred CCCCCEEEEEC-------CCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 17452278741-------89995479999778898867787850699991798489997899985565556898522358
Q ss_pred --------------------------------CCCCEEEEEECCCCCCCCCCEEEEE---EEEEEECCCCEE-----EEE
Q ss_conf --------------------------------6673220367389888855056500---236880588659-----999
Q 001567 349 --------------------------------SLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRL-----YAI 388 (1052)
Q Consensus 349 --------------------------------~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~~~~l-----~~~ 388 (1052)
|...+.+++|+|++ +.+++|+ ++++|+..++.+ +..
T Consensus 402 ~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg----~~laSgs~DgtVrlWd~~~g~~~~~~~~~~ 477 (902)
T 2oaj_A 402 PLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYG----TAFITGHSNGSVRIYDASHGDIQDNASFEV 477 (902)
T ss_dssp TBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEE----EEEEEEETTSEEEEEESSCCTTTTTBCEEE
T ss_pred CCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC----CEEEEECCCCCEEEEECCCCCCCCCCEEEE
T ss_conf 9724899997499999888860469997545785778753336667----589996589838999787764567736775
Q ss_pred E------CCCCCCEE--EEEC-CCEEEEECCCCCEEEEEEEECCCE-----------EEEEECCCCC-------------
Q ss_conf 5------28964099--9921-424652046995356676665855-----------8997069965-------------
Q 001567 389 E------EGSSERVL--IFSF-GKCCLNRGVSGMTYARQVIYGEDR-----------LLVVQSEDTD------------- 435 (1052)
Q Consensus 389 ~------~~~~~~I~--~~~~-~k~~~s~s~d~~~~~w~~~~~~~~-----------~~~~~~~~~~------------- 435 (1052)
. .+|...|. +|++ ++.+++++.|+++++|++..+... .+-+...+..
T Consensus 478 ~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (902)
T 2oaj_A 478 NLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRA 557 (902)
T ss_dssp EHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGC
T ss_pred ECHHHCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf 01541377888764699963899969999458579999924865557545577866511345513467965432242368
Q ss_pred -HHEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEE-EEECCCCCEEEECCC--CC-EEEEEEEEEEEE-----
Q ss_conf -00002202571002699867999992699999999589649-999358938981674--54-023479998872-----
Q 001567 436 -ELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQKKWRVFGDI--TQ-EQKIQSKGLLWL----- 505 (1052)
Q Consensus 436 -~~~w~~~~~p~~~~~h~~~I~~va~SpdG~~lavag~dG~i-iw~~~s~~wk~f~~~--~~-e~~~~v~gl~W~----- 505 (1052)
.......+....+.+|..+|++++||||| +||+|+.||.+ +||+.++....-+.. .. ...-.|..+.|.
T Consensus 558 ~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~ 636 (902)
T 2oaj_A 558 PTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYG 636 (902)
T ss_dssp CTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECT
T ss_pred CCCCCCCCCEEEEEECCCCCEEEEEECCCC-EEEEEECCCCEEEEECCCCEEEEEEEHHHHCCCCCCCEEEEEEEEEECC
T ss_conf 988777601469998688867799964876-8999958976999988898399970246726466661399999998417
Q ss_pred CC-----EEEEEEEECCCCEEEEEEEEC
Q ss_conf 98-----999999751898078999228
Q 001567 506 GK-----IIVVCNYIDSSNTYELLFYPR 528 (1052)
Q Consensus 506 ~~-----~liv~~~~~~~~~~eLrly~~ 528 (1052)
+| .++++ +.+..+++|+.
T Consensus 637 ~Dg~~~~~l~sg-----s~D~tv~~wd~ 659 (902)
T 2oaj_A 637 DDGYSSILMVCG-----TDMGEVITYKI 659 (902)
T ss_dssp TSSSEEEEEEEE-----ETTSEEEEEEE
T ss_pred CCCCCCEEEEEE-----ECCCCEEEEEE
T ss_conf 898763389999-----56873999999
Done!