Query 001572
Match_columns 1051
No_of_seqs 417 out of 2300
Neff 6.1
Searched_HMMs 29240
Date Tue Mar 26 17:12:51 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001572.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_868-872//hhsearch_pdb/001572hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1x88_A Kinesin-like protein KI 1.0 1 1 737.3 24.7 351 46-403 3-359 (359)
2 2owm_A Nckin3-434, related to 1.0 1 1 736.8 28.7 352 46-412 33-431 (443)
3 3b6u_A Kinesin-like protein KI 1.0 1 1 736.4 26.5 353 47-414 17-372 (372)
4 2y65_A Kinesin, kinesin heavy 1.0 1 1 731.6 27.0 351 46-422 6-361 (365)
5 2wbe_C Bipolar kinesin KRP-130 1.0 1 1 731.4 27.5 350 46-406 18-373 (373)
6 3cob_A Kinesin heavy chain-lik 1.0 1 1 726.3 29.9 361 48-441 2-364 (369)
7 3bfn_A Kinesin-like protein KI 1.0 1 1 723.7 24.8 353 47-426 17-374 (388)
8 2vvg_A Kinesin-2; motor protei 1.0 1 1 722.7 28.6 336 50-405 3-346 (350)
9 2zfi_A Kinesin-like protein KI 1.0 1 1 712.7 28.5 336 50-402 3-362 (366)
10 1goj_A Kinesin, kinesin heavy 1.0 1 1 708.1 29.6 337 49-407 4-343 (355)
No 1
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=1.00 E-value=1 Score=737.27 Aligned_cols=351 Identities=54% Similarity=0.878 Sum_probs=317.5
Q ss_pred CCCCCCCEEEEEEECCCCCHHHHCCCCCEEEECCCCCEEEEEEC-CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 89999953899980999933431299918984399635899713-57877671674371219985201244442466899
Q 001572 46 DRDKEVNVQVLLRCRPLSDDEQKSNVPRVISCSEDKREVTVLQS-VANKQIDRVFTFDKVFGPKAQQRSIYDQAIVPIVN 124 (1051)
Q Consensus 46 ~~~~~~nV~V~vRvRP~~~~E~~~~~~~vv~~~~~~~~v~v~~~-~~~~~~~k~F~FD~VF~~~asQ~~Vy~~~v~plV~ 124 (1051)
..+...||+|+|||||++..|...+...++.+++....+.+... .......+.|+||+||+++++|++||+.++.|+|+
T Consensus 3 ~~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~ 82 (359)
T 1x88_A 3 KEEKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILD 82 (359)
T ss_dssp ------CCEEEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEEETTEEEEEEEECSEEECTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEECEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 77899985999990899925630499649997599857998378766776744875407985267453789999888689
Q ss_pred HHHCCCCCEEEECCCCCCCCCCEECCCCCCCC---CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC
Q ss_conf 86339972056105899994413126888999---999877765157799999777530367630799999875610123
Q 001572 125 EVLDGFNCTVFAYGQTGTGKTYTMEGGMRNKG---GDLPAEAGVIPRAVRQIFDTLEAQNADYSMKVSFLELYNEDITDL 201 (1051)
Q Consensus 125 ~vl~G~N~tIfAYGqTGSGKTyTM~G~~~~~~---~~~~~~~GIIpRal~~LF~~l~~~~~~~sV~vS~lEIYnE~i~DL 201 (1051)
.+|+|||+||||||||||||||||+|+..... ....+.+|||||++++||..+...+.+|.|+|||+|||||+|+||
T Consensus 83 ~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~v~vS~~EIYnE~i~DL 162 (359)
T 1x88_A 83 EVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDL 162 (359)
T ss_dssp HHHTTCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSSSSEEEEEEEEEEEEETTEEEET
T ss_pred HHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEEH
T ss_conf 87379824899847899987568856677665444445666870389999999877415825999999999957610012
Q ss_pred CCCCCCCCCCCCCCCCCEEEEECC--CCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 456788885222479861665269--995698385489807978999997632101552222355889997059999999
Q 001572 202 LAQEDHSKSTEDKQKKPISLMEDG--KGCVVVRGLEEEAVYSANDIYTILERGSAKRRTADTLLNKRSSRSHSVFSITVH 279 (1051)
Q Consensus 202 L~~~~~~~~~~~~~~~~l~i~ed~--~~gv~V~gL~e~~V~s~~e~~~lL~~G~~~R~~~~T~~N~~SSRSH~IftI~i~ 279 (1051)
|++... ....+.+++++ +++++|.||+++.|.+++|++.+|..|..+|.+++|.||..|||||+||+|+|+
T Consensus 163 L~~~~~-------~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~ 235 (359)
T 1x88_A 163 LNPSSD-------VSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIH 235 (359)
T ss_dssp TCTTSC-------TTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEE
T ss_pred HCCCCC-------CCCCCEEEECCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEE
T ss_conf 115655-------5666058865577898898287899849999999999987751461225477877776289999998
Q ss_pred EEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC
Q ss_conf 98434698421676223476388986444678911346888775552899999999986199997689982023442005
Q 001572 280 IKEAAVGDEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSAHIPYRDSKLTRLLRDSL 359 (1051)
Q Consensus 280 ~~~~~~~~~~~~~~skL~lVDLAGSEr~~ksga~~~r~~Ea~~INkSL~aLg~VI~aL~~~~~hIPYRdSKLTrLLqdsL 359 (1051)
......++....+.|+|+|||||||||+.++++.|.|++|+..||+||++||+||.+|+++..||||||||||+||||+|
T Consensus 236 ~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsL 315 (359)
T 1x88_A 236 MKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSL 315 (359)
T ss_dssp EEEECTTSCEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGS
T ss_pred EECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 74355788713778899998189987354358863201777653078999999999986479977622566889999975
Q ss_pred CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99840007762389977768668799999983004455531011
Q 001572 360 GGKTKTCIIATISPSAHSLEETMSTLDYAYRAKNIKNKPEANQK 403 (1051)
Q Consensus 360 GGnskT~iIatISP~~~~~eETLsTL~fA~RAk~Ikn~p~iN~~ 403 (1051)
|||++|+|||||||+..+++||++||+||.|||+|+|+|.+|++
T Consensus 316 gGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~~ 359 (359)
T 1x88_A 316 GGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQK 359 (359)
T ss_dssp SSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC----
T ss_pred CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCC
T ss_conf 89972999999789745689999999999998656676614779
No 2
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=1.00 E-value=1 Score=736.82 Aligned_cols=352 Identities=38% Similarity=0.578 Sum_probs=306.2
Q ss_pred CCCCCCCEEEEEEECCCCCHHHHCCCCCEEEECCCCCEEEEEECCC------------CCCCCEEEECCCCCCC------
Q ss_conf 8999995389998099993343129991898439963589971357------------8776716743712199------
Q 001572 46 DRDKEVNVQVLLRCRPLSDDEQKSNVPRVISCSEDKREVTVLQSVA------------NKQIDRVFTFDKVFGP------ 107 (1051)
Q Consensus 46 ~~~~~~nV~V~vRvRP~~~~E~~~~~~~vv~~~~~~~~v~v~~~~~------------~~~~~k~F~FD~VF~~------ 107 (1051)
..+...||+|+|||||++++|...+...++.+++....+++..+.. .....+.|+||+||++
T Consensus 33 ~~~~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~~~ 112 (443)
T 2owm_A 33 SKDPGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTEDE 112 (443)
T ss_dssp -CCCCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTTST
T ss_pred CCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCC
T ss_conf 67899894999993999968862699459997589862799558876543333321233667726852738278776776
Q ss_pred -CCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-----C
Q ss_conf -8520124444246689986339972056105899994413126888999999877765157799999777530-----3
Q 001572 108 -KAQQRSIYDQAIVPIVNEVLDGFNCTVFAYGQTGTGKTYTMEGGMRNKGGDLPAEAGVIPRAVRQIFDTLEAQ-----N 181 (1051)
Q Consensus 108 -~asQ~~Vy~~~v~plV~~vl~G~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~~~~~GIIpRal~~LF~~l~~~-----~ 181 (1051)
.++|++||+.++.|+|+.+|+|||+||||||||||||||||+|+ +.++|||||++++||..++.. +
T Consensus 113 ~~asQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~--------~~~~GIipr~~~~lF~~i~~~~~~~~~ 184 (443)
T 2owm_A 113 HYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGT--------PDQPGLIPRTCEDLFQRIASAQDETPN 184 (443)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCC--------TTSCCHHHHHHHHHHHHHHHTTTTSTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECC--------CCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 578799998763246888863687427998678899998886468--------777753799999999988765213677
Q ss_pred CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 67630799999875610123456788885222479861665269995698385489807978999997632101552222
Q 001572 182 ADYSMKVSFLELYNEDITDLLAQEDHSKSTEDKQKKPISLMEDGKGCVVVRGLEEEAVYSANDIYTILERGSAKRRTADT 261 (1051)
Q Consensus 182 ~~~sV~vS~lEIYnE~i~DLL~~~~~~~~~~~~~~~~l~i~ed~~~gv~V~gL~e~~V~s~~e~~~lL~~G~~~R~~~~T 261 (1051)
..|.|+|||+|||||+|+|||++.... .....+.|+||+.+|++|.||+++.|.+++|++.+|..|..+|.+++|
T Consensus 185 ~~~~V~vS~lEIYnE~i~DLL~~~~~~-----~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T 259 (443)
T 2owm_A 185 ISYNVKVSYFEVYNEHVRDLLAPVVPN-----KPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVAST 259 (443)
T ss_dssp CEEEEEEEEEEEETTEEEETTSCCCSS-----CCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCSS
T ss_pred CEEEEEEEEEEEECCEEEECCCCCCCC-----CCCCCCCEEECCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 349999999999889756856763457-----865344303779999952687799828999999999999733786337
Q ss_pred CCCCCCCCCEEEEEEEEEEEECCC-CCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 355889997059999999984346-9842167622347638898644467891134688877555289999999998619
Q 001572 262 LLNKRSSRSHSVFSITVHIKEAAV-GDEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEH 340 (1051)
Q Consensus 262 ~~N~~SSRSH~IftI~i~~~~~~~-~~~~~~~~skL~lVDLAGSEr~~ksga~~~r~~Ea~~INkSL~aLg~VI~aL~~~ 340 (1051)
.||..|||||+||+|+|.+..... .+....+.|+|+|||||||||+.++++.|.|++|+..||+||++||+||.+|+++
T Consensus 260 ~~N~~SSRSH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~ 339 (443)
T 2owm_A 260 KMNDTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADP 339 (443)
T ss_dssp SSSCBCTTEEEEEEEEEEEEC-------CCEEEEEEEEEECCCCCC--------------CCSSHHHHHHHHHHHHHCC-
T ss_pred CCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCC
T ss_conf 58776677719999999986035678874068877999979887535656776641211001057899999999998604
Q ss_pred C----------------------CCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9----------------------997689982023442005998400077623899777686687999999830044555
Q 001572 341 S----------------------AHIPYRDSKLTRLLRDSLGGKTKTCIIATISPSAHSLEETMSTLDYAYRAKNIKNKP 398 (1051)
Q Consensus 341 ~----------------------~hIPYRdSKLTrLLqdsLGGnskT~iIatISP~~~~~eETLsTL~fA~RAk~Ikn~p 398 (1051)
. .|||||||||||||||+||||++|+|||||||+ +++||++||+||.|||+|+|+|
T Consensus 340 ~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~ 417 (443)
T 2owm_A 340 KSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTRA 417 (443)
T ss_dssp ------------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHCCCCC
T ss_conf 55555444322234333445677745574547688888862799708999981643--0789999999999985445633
Q ss_pred CCCCCCCHHHHHHH
Q ss_conf 31011587999999
Q 001572 399 EANQKMSKAVLLKD 412 (1051)
Q Consensus 399 ~iN~~~~k~~lik~ 412 (1051)
.+|+.....+..++
T Consensus 418 ~vN~~d~~~~~~~~ 431 (443)
T 2owm_A 418 VVNQVDGVSAAERD 431 (443)
T ss_dssp CCCCC---------
T ss_pred EECCCCCCCHHHHH
T ss_conf 35135776678889
No 3
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=736.38 Aligned_cols=353 Identities=44% Similarity=0.712 Sum_probs=319.8
Q ss_pred CCCCCCEEEEEEECCCCCHHHHCCCCCEEEECCCCCEEEEEECCC-CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999995389998099993343129991898439963589971357-8776716743712199852012444424668998
Q 001572 47 RDKEVNVQVLLRCRPLSDDEQKSNVPRVISCSEDKREVTVLQSVA-NKQIDRVFTFDKVFGPKAQQRSIYDQAIVPIVNE 125 (1051)
Q Consensus 47 ~~~~~nV~V~vRvRP~~~~E~~~~~~~vv~~~~~~~~v~v~~~~~-~~~~~k~F~FD~VF~~~asQ~~Vy~~~v~plV~~ 125 (1051)
.+...+|+|+|||||++.+|...+...++.+++....+.+..+.. .....+.|+||+||+++++|++||+.++.|+|+.
T Consensus 17 ~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~ 96 (372)
T 3b6u_A 17 QGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNAKQFELYDETFRPLVDS 96 (372)
T ss_dssp ----CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCTTTCCCEEEECSEEECTTCCHHHHHHHTHHHHHHH
T ss_pred CCCCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 78999839999869899355304996389995899879997788777778438876869688674178988787777899
Q ss_pred HHCCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CCCCCCEEEEEEEECCCCCCCCCC
Q ss_conf 6339972056105899994413126888999999877765157799999777530-367630799999875610123456
Q 001572 126 VLDGFNCTVFAYGQTGTGKTYTMEGGMRNKGGDLPAEAGVIPRAVRQIFDTLEAQ-NADYSMKVSFLELYNEDITDLLAQ 204 (1051)
Q Consensus 126 vl~G~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~~~~~GIIpRal~~LF~~l~~~-~~~~sV~vS~lEIYnE~i~DLL~~ 204 (1051)
+|+|||+||||||||||||||||+|... .+..+|||||++.+||..+... +.+|.|+|||+|||||+|+|||++
T Consensus 97 ~l~G~n~tifAYGqTGSGKTyTM~G~~~-----~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~ 171 (372)
T 3b6u_A 97 VLQGFNGTIFAYGQTGTGKTYTMEGIRG-----DPEKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSK 171 (372)
T ss_dssp HHTTCCEEEEEEESTTSSHHHHHTBCTT-----SGGGBCHHHHHHHHHHHHHHTCSSCEEEEEEEEEEEETTEEEETTSS
T ss_pred HHCCCEEEEEEECCCCCCCCEEEECCCC-----CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCC
T ss_conf 8679813588656899999875755899-----83448818899999999865145773699998999967888997789
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECC
Q ss_conf 78888522247986166526999569838548980797899999763210155222235588999705999999998434
Q 001572 205 EDHSKSTEDKQKKPISLMEDGKGCVVVRGLEEEAVYSANDIYTILERGSAKRRTADTLLNKRSSRSHSVFSITVHIKEAA 284 (1051)
Q Consensus 205 ~~~~~~~~~~~~~~l~i~ed~~~gv~V~gL~e~~V~s~~e~~~lL~~G~~~R~~~~T~~N~~SSRSH~IftI~i~~~~~~ 284 (1051)
.. ...+.+++++.++++|.||+++.|.+++|++.+|..|..+|.+++|.||..|||||+||+|+|......
T Consensus 172 ~~---------~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~ 242 (372)
T 3b6u_A 172 DQ---------TKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVG 242 (372)
T ss_dssp CT---------TCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC--
T ss_pred CC---------CCCCEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECC
T ss_conf 77---------777368987999675289889992679999999999997667254557787776429999999996047
Q ss_pred CCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCHHHHHHHCCCCCC
Q ss_conf 698421676223476388986444678911346888775552899999999986199-9976899820234420059984
Q 001572 285 VGDEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHS-AHIPYRDSKLTRLLRDSLGGKT 363 (1051)
Q Consensus 285 ~~~~~~~~~skL~lVDLAGSEr~~ksga~~~r~~Ea~~INkSL~aLg~VI~aL~~~~-~hIPYRdSKLTrLLqdsLGGns 363 (1051)
.++...++.|+|+|||||||||..++++.|.|++|+..||+||++||+||.+|+++. .||||||||||+||||+||||+
T Consensus 243 ~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGns 322 (372)
T 3b6u_A 243 LDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNA 322 (372)
T ss_dssp ---CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHTTTTTTSSS
T ss_pred CCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf 78876267889999979887655445751543146756506499999999998638988786622088999998629995
Q ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 000776238997776866879999998300445553101158799999999
Q 001572 364 KTCIIATISPSAHSLEETMSTLDYAYRAKNIKNKPEANQKMSKAVLLKDLY 414 (1051)
Q Consensus 364 kT~iIatISP~~~~~eETLsTL~fA~RAk~Ikn~p~iN~~~~k~~lik~l~ 414 (1051)
+|+||+||||+..+++||++||+||.|||+|+|+|.+|++. +.+++++|+
T Consensus 323 kt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~-~~~~~~~~~ 372 (372)
T 3b6u_A 323 KTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDP-KDALLREFQ 372 (372)
T ss_dssp EEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC------------
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCH-HHHHHHHCC
T ss_conf 48999996885247999999999999986455666255775-799998519
No 4
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=1.00 E-value=1 Score=731.57 Aligned_cols=351 Identities=42% Similarity=0.636 Sum_probs=318.3
Q ss_pred CCCCCCCEEEEEEECCCCCHHHHCCCCCEEEECCC--CCEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 89999953899980999933431299918984399--6358997135787767167437121998520124444246689
Q 001572 46 DRDKEVNVQVLLRCRPLSDDEQKSNVPRVISCSED--KREVTVLQSVANKQIDRVFTFDKVFGPKAQQRSIYDQAIVPIV 123 (1051)
Q Consensus 46 ~~~~~~nV~V~vRvRP~~~~E~~~~~~~vv~~~~~--~~~v~v~~~~~~~~~~k~F~FD~VF~~~asQ~~Vy~~~v~plV 123 (1051)
..+...||+|+|||||+++.|...+...++.+.++ ...+.+ ..+.|.||+||+++++|++||+.++.|+|
T Consensus 6 ~~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~--------~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv 77 (365)
T 2y65_A 6 EIPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISI--------AGKVYLFDKVFKPNASQEKVYNEAAKSIV 77 (365)
T ss_dssp --CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEE--------TTEEEECSEEECTTCCHHHHHHHHTHHHH
T ss_pred CCCCCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCCEEEE--------CCEEEECCEEECCCCCHHHHHHHHHHHHH
T ss_conf 6789999599999496994673159925999479987767998--------99898674696478998999998630377
Q ss_pred HHHHCCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC--CCCCCCEEEEEEEECCCCCCC
Q ss_conf 986339972056105899994413126888999999877765157799999777530--367630799999875610123
Q 001572 124 NEVLDGFNCTVFAYGQTGTGKTYTMEGGMRNKGGDLPAEAGVIPRAVRQIFDTLEAQ--NADYSMKVSFLELYNEDITDL 201 (1051)
Q Consensus 124 ~~vl~G~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~~~~~GIIpRal~~LF~~l~~~--~~~~sV~vS~lEIYnE~i~DL 201 (1051)
+.+|+|||+||||||||||||||||+|.... +..+|||||++++||..+... +.+|.|+|||+|||||+|+||
T Consensus 78 ~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~-----~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DL 152 (365)
T 2y65_A 78 TDVLAGYNGTIFAYGQTSSGKTHTMEGVIGD-----SVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDL 152 (365)
T ss_dssp HHHHTTCCEEEEEECSTTSSHHHHHTBSTTC-----TTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEET
T ss_pred HHHHCCCCEEEEEECCCCCCCCEEEECCCCC-----CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEEC
T ss_conf 9986798248983458999996488668887-----55577377999999999983368953999999999987721262
Q ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEE
Q ss_conf 45678888522247986166526999569838548980797899999763210155222235588999705999999998
Q 001572 202 LAQEDHSKSTEDKQKKPISLMEDGKGCVVVRGLEEEAVYSANDIYTILERGSAKRRTADTLLNKRSSRSHSVFSITVHIK 281 (1051)
Q Consensus 202 L~~~~~~~~~~~~~~~~l~i~ed~~~gv~V~gL~e~~V~s~~e~~~lL~~G~~~R~~~~T~~N~~SSRSH~IftI~i~~~ 281 (1051)
|++. +..+.+++|+.++++|.|++++.|.+++|++.+|..|..+|.+++|.||..|||||+||+|++...
T Consensus 153 L~~~----------~~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~ 222 (365)
T 2y65_A 153 LDVS----------KVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQE 222 (365)
T ss_dssp TCTT----------CCSBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEE
T ss_pred CCCC----------CCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEE
T ss_conf 2587----------677237887999878427889965879999999999986466523568887887639999999997
Q ss_pred ECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHCCC
Q ss_conf 43469842167622347638898644467891134688877555289999999998619-99976899820234420059
Q 001572 282 EAAVGDEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEH-SAHIPYRDSKLTRLLRDSLG 360 (1051)
Q Consensus 282 ~~~~~~~~~~~~skL~lVDLAGSEr~~ksga~~~r~~Ea~~INkSL~aLg~VI~aL~~~-~~hIPYRdSKLTrLLqdsLG 360 (1051)
..... ....|+|+|||||||||..++++.|.|++|+..||+||++||+||.+|+++ ..||||||||||+||||+||
T Consensus 223 ~~~~~---~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLg 299 (365)
T 2y65_A 223 NLENQ---KKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLG 299 (365)
T ss_dssp ETTTC---CEEEEEEEEEECCCCCC----------------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTT
T ss_pred ECCCC---CEEEEEEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 05888---786899999979998820121895224789988888899999899998527888786635788898776138
Q ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 98400077623899777686687999999830044555310115879999999999999999
Q 001572 361 GKTKTCIIATISPSAHSLEETMSTLDYAYRAKNIKNKPEANQKMSKAVLLKDLYLEIERMKE 422 (1051)
Q Consensus 361 GnskT~iIatISP~~~~~eETLsTL~fA~RAk~Ikn~p~iN~~~~k~~lik~l~~Ei~~Lk~ 422 (1051)
||++|+||+||||+..+++||++||+||.|||+|+|+|.+|+..+...++++|..|+++++.
T Consensus 300 Gnskt~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~~~~~~~~~e~~~~~~ 361 (365)
T 2y65_A 300 GNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNAR 361 (365)
T ss_dssp SSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSHHHHHC----------
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99637999984675278899999999999972156754117889999999999999999998
No 5
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=731.44 Aligned_cols=350 Identities=51% Similarity=0.862 Sum_probs=314.0
Q ss_pred CCCCCCCEEEEEEECCCCCHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 89999953899980999933431299918984399635899713578776716743712199852012444424668998
Q 001572 46 DRDKEVNVQVLLRCRPLSDDEQKSNVPRVISCSEDKREVTVLQSVANKQIDRVFTFDKVFGPKAQQRSIYDQAIVPIVNE 125 (1051)
Q Consensus 46 ~~~~~~nV~V~vRvRP~~~~E~~~~~~~vv~~~~~~~~v~v~~~~~~~~~~k~F~FD~VF~~~asQ~~Vy~~~v~plV~~ 125 (1051)
..+...||+|+|||||++.+|...+...++.+.+.. .+.+... ......+.|+||+||+++++|++||+.++.|+|+.
T Consensus 18 ~~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~-~~~~~~~-~~~~~~~~F~FD~vf~~~~~Q~~Vy~~~~~plv~~ 95 (373)
T 2wbe_C 18 QKKSNQNIQVYVRVRPLNSRERCIRSAEVVDVVGPR-EVVTRHT-LDSKLTKKFTFDRSFGPESKQCDVYSVVVSPLIEE 95 (373)
T ss_dssp CCCCCEECEEEEEECCCCHHHHHHTCCBCEEEETTT-EEEESSS-SSSTTCEEEECSEEECTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEECCCCCHHHHCCCCCCEEEECCCC-EEEEECC-CCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 767899969999829899145055898569984898-6998267-78888569863489524660667999999999998
Q ss_pred HHCCCCCEEEECCCCCCCCCCEECCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC
Q ss_conf 633997205610589999441312688899---99998777651577999997775303676307999998756101234
Q 001572 126 VLDGFNCTVFAYGQTGTGKTYTMEGGMRNK---GGDLPAEAGVIPRAVRQIFDTLEAQNADYSMKVSFLELYNEDITDLL 202 (1051)
Q Consensus 126 vl~G~N~tIfAYGqTGSGKTyTM~G~~~~~---~~~~~~~~GIIpRal~~LF~~l~~~~~~~sV~vS~lEIYnE~i~DLL 202 (1051)
+|+|||+||||||||||||||||+|+.... ....+..+|||||++++||..+.....+|.|+|||+|||||+|+|||
T Consensus 96 ~l~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~v~vS~~EIYnE~i~DLL 175 (373)
T 2wbe_C 96 VLNGYNCTVFAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSHLFDELRMMEVEYTMRISYLELYNEELCDLL 175 (373)
T ss_dssp HHHTCCEEEEEECSTTSSHHHHHTBSCSCCSSSCSSCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEETTEEEESS
T ss_pred HHCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCEEEECC
T ss_conf 74794689995268889831523237654433344556788676999999999987258629999999998677678977
Q ss_pred CCCCCCCCCCCCCCCCEEEEEC--CCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEE
Q ss_conf 5678888522247986166526--99956983854898079789999976321015522223558899970599999999
Q 001572 203 AQEDHSKSTEDKQKKPISLMED--GKGCVVVRGLEEEAVYSANDIYTILERGSAKRRTADTLLNKRSSRSHSVFSITVHI 280 (1051)
Q Consensus 203 ~~~~~~~~~~~~~~~~l~i~ed--~~~gv~V~gL~e~~V~s~~e~~~lL~~G~~~R~~~~T~~N~~SSRSH~IftI~i~~ 280 (1051)
++.. ...+.++++ .+++++|.||+++.|.+++|++.+|..|..+|++++|.||..|||||+||+|+|+.
T Consensus 176 ~~~~---------~~~l~i~~~~~~~g~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~ 246 (373)
T 2wbe_C 176 STDD---------TTKIRIFDDSTKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHI 246 (373)
T ss_dssp CTTS---------CSCCCEEECSSSSSCEEETTCCCEEESSHHHHHHHHHHHHHHHTTTCSCHHHHHHHSEEEEEEEEEE
T ss_pred CCCC---------CCCCEEEECCCCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf 8987---------7772467415778957836866870699999999999986330431143888888861899999999
Q ss_pred EECCCCCCCEEEEEEEEEEECCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC
Q ss_conf 843469842167622347638898644467891-1346888775552899999999986199997689982023442005
Q 001572 281 KEAAVGDEELIKCGKLNLVDLAGSENISRSGAR-EGRAREAGEINKSLLTLGRVINALVEHSAHIPYRDSKLTRLLRDSL 359 (1051)
Q Consensus 281 ~~~~~~~~~~~~~skL~lVDLAGSEr~~ksga~-~~r~~Ea~~INkSL~aLg~VI~aL~~~~~hIPYRdSKLTrLLqdsL 359 (1051)
......+....+.|+|+|||||||||..++++. |.|++|+..||+||++||+||.+|+++..||||||||||+||||+|
T Consensus 247 ~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsL 326 (373)
T 2wbe_C 247 RENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESL 326 (373)
T ss_dssp CTTCTTTCCEEEEEEEEEEECCCC--------------------CHHHHHHHHHHHHHHHCSSCCCGGGCHHHHHTHHHH
T ss_pred ECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 65788887425589999997998874632367656314678888888999999999997179957621656889999873
Q ss_pred CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
Q ss_conf 99840007762389977768668799999983004455531011587
Q 001572 360 GGKTKTCIIATISPSAHSLEETMSTLDYAYRAKNIKNKPEANQKMSK 406 (1051)
Q Consensus 360 GGnskT~iIatISP~~~~~eETLsTL~fA~RAk~Ikn~p~iN~~~~k 406 (1051)
|||++|+|||||||+..+++||++||+||.|||+|+|+|.+|+.+++
T Consensus 327 gGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~n~p~vN~~~s~ 373 (373)
T 2wbe_C 327 GGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLTK 373 (373)
T ss_dssp HSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEECCCCCEECC-
T ss_pred CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCC
T ss_conf 89960999999699734589999999999998656665433331579
No 6
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=1.00 E-value=1 Score=726.28 Aligned_cols=361 Identities=35% Similarity=0.587 Sum_probs=321.6
Q ss_pred CCCCCEEEEEEECCCCCHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99995389998099993343129991898439963589971357877671674371219985201244442466899863
Q 001572 48 DKEVNVQVLLRCRPLSDDEQKSNVPRVISCSEDKREVTVLQSVANKQIDRVFTFDKVFGPKAQQRSIYDQAIVPIVNEVL 127 (1051)
Q Consensus 48 ~~~~nV~V~vRvRP~~~~E~~~~~~~vv~~~~~~~~v~v~~~~~~~~~~k~F~FD~VF~~~asQ~~Vy~~~v~plV~~vl 127 (1051)
+...||+|+|||||++..|...+...++...+ ...+.... .....+.|.||+||+++++|++||+. +.|+|+.++
T Consensus 2 e~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~-~~~v~~~~---~~~~~~~f~FD~Vf~~~~~Q~~Vy~~-~~~lv~~~l 76 (369)
T 3cob_A 2 DMKGKIRVYCRLRPLCEKEIIAKERNAIRSVD-EFTVEHLW---KDDKAKQHMYDRVFDGNATQDDVFED-TKYLVQSAV 76 (369)
T ss_dssp --CCBCEEEEEECCCCHHHHHTTCCBCEEECS-SSEEEEEC---TTSCEEEEECSEEECTTCCHHHHHHT-TTHHHHHHH
T ss_pred CCCCCEEEEEECCCCCHHHCCCCCCEEEECCC-CEEEEECC---CCCCCEEEECCEEECCCCCCCEEHHH-HHHHHHHHH
T ss_conf 88998499998799983454679837997699-67999337---89982688659898999973140221-313257664
Q ss_pred CCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC--CCCCCEEEEEEEECCCCCCCCCCC
Q ss_conf 399720561058999944131268889999998777651577999997775303--676307999998756101234567
Q 001572 128 DGFNCTVFAYGQTGTGKTYTMEGGMRNKGGDLPAEAGVIPRAVRQIFDTLEAQN--ADYSMKVSFLELYNEDITDLLAQE 205 (1051)
Q Consensus 128 ~G~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~~~~~GIIpRal~~LF~~l~~~~--~~~sV~vS~lEIYnE~i~DLL~~~ 205 (1051)
+|||+||||||||||||||||+|+ +.++|||||++.+||..++... ..|.|++||+|||||+|+|||++.
T Consensus 77 ~G~n~tifAYGqTGSGKTyTM~G~--------~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~ 148 (369)
T 3cob_A 77 DGYNVCIFAYGQTGSGKTFTIYGA--------DSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPK 148 (369)
T ss_dssp TTCEEEEEEEECTTSSHHHHHTBC--------SSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCS
T ss_pred CCCCEEEEEECCCCCCCEEEECCC--------CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCC
T ss_conf 697159998789999883751179--------988862589999999998741357526778999877076323457875
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCC
Q ss_conf 88885222479861665269995698385489807978999997632101552222355889997059999999984346
Q 001572 206 DHSKSTEDKQKKPISLMEDGKGCVVVRGLEEEAVYSANDIYTILERGSAKRRTADTLLNKRSSRSHSVFSITVHIKEAAV 285 (1051)
Q Consensus 206 ~~~~~~~~~~~~~l~i~ed~~~gv~V~gL~e~~V~s~~e~~~lL~~G~~~R~~~~T~~N~~SSRSH~IftI~i~~~~~~~ 285 (1051)
.. .+..+.+++|+.++++|.|++++.|.+++|++.+|..|..+|++++|.||..|||||+||+|++.......
T Consensus 149 ~~-------~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~ 221 (369)
T 3cob_A 149 QA-------KRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQT 221 (369)
T ss_dssp SS-------CCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETTT
T ss_pred CC-------CCCCEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEEEEECCCC
T ss_conf 56-------77642789979998880598799808999999999987525523034477877763389999999852787
Q ss_pred CCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCE
Q ss_conf 98421676223476388986444678911346888775552899999999986199997689982023442005998400
Q 001572 286 GDEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSAHIPYRDSKLTRLLRDSLGGKTKT 365 (1051)
Q Consensus 286 ~~~~~~~~skL~lVDLAGSEr~~ksga~~~r~~Ea~~INkSL~aLg~VI~aL~~~~~hIPYRdSKLTrLLqdsLGGnskT 365 (1051)
.....|+|+|||||||||..++++.|.|++|+..||+||++||+||.+|+++..||||||||||+||||+||||++|
T Consensus 222 ---~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt 298 (369)
T 3cob_A 222 ---QAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKT 298 (369)
T ss_dssp ---CCEEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSEE
T ss_pred ---CCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCE
T ss_conf ---72788899999688787544347630234778787788999999999986489967874777788788762898527
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf 0776238997776866879999998300445553101158799999999999999999999985179877802248
Q 001572 366 CIIATISPSAHSLEETMSTLDYAYRAKNIKNKPEANQKMSKAVLLKDLYLEIERMKEDVRAARDKNGVYVPHERYA 441 (1051)
Q Consensus 366 ~iIatISP~~~~~eETLsTL~fA~RAk~Ikn~p~iN~~~~k~~lik~l~~Ei~~Lk~el~~~r~~~g~~~~~~~~~ 441 (1051)
+|||||||+..+++||++||+||.|||+|+|+|.+|... .||.+||.+|..++++.|.+.+.+.+.
T Consensus 299 ~mIa~isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~~~----------~ei~~L~~~l~~~~~~~~~~~~~~~~~ 364 (369)
T 3cob_A 299 LMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS----------KEVARLKKLVSYWKEQAGRKGDDEELE 364 (369)
T ss_dssp EEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCEEC----------HHHHHHHHHTTCC-----------CCB
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH----------HHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 999994772002899999999999986545677415788----------999999999999997647999867877
No 7
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=723.67 Aligned_cols=353 Identities=35% Similarity=0.571 Sum_probs=309.7
Q ss_pred CCCCCCEEEEEEECCCCCHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99999538999809999334312999189843996358997135787767167437121998520124444246689986
Q 001572 47 RDKEVNVQVLLRCRPLSDDEQKSNVPRVISCSEDKREVTVLQSVANKQIDRVFTFDKVFGPKAQQRSIYDQAIVPIVNEV 126 (1051)
Q Consensus 47 ~~~~~nV~V~vRvRP~~~~E~~~~~~~vv~~~~~~~~v~v~~~~~~~~~~k~F~FD~VF~~~asQ~~Vy~~~v~plV~~v 126 (1051)
.+...+|+|+|||||+++.|...+...++...+.. .+.+.. ..+....+.|.||+||+++++|++||+.++.|+|+.+
T Consensus 17 ~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~-~~~i~~-~~~~~~~~~f~FD~Vf~~~~tQ~~Vy~~~~~plv~~~ 94 (388)
T 3bfn_A 17 QGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSC-SLEIAN-WRNHQETLKYQFDAFYGERSTQQDIYAGSVQPILRHL 94 (388)
T ss_dssp SSCCCCCEEEEEECCCC-------------------------------CEEEEECSEEECTTCCHHHHHHHHTGGGHHHH
T ss_pred CCCCCCEEEEEECCCCCHHHHCCCCCCEEEECCCC-EEEEEC-CCCCCCEEEEECCEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 68999979999779899145346998639955998-599956-8888770598723695678977577899888888876
Q ss_pred HCCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-----CCCCCCEEEEEEEECCCCCCC
Q ss_conf 339972056105899994413126888999999877765157799999777530-----367630799999875610123
Q 001572 127 LDGFNCTVFAYGQTGTGKTYTMEGGMRNKGGDLPAEAGVIPRAVRQIFDTLEAQ-----NADYSMKVSFLELYNEDITDL 201 (1051)
Q Consensus 127 l~G~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~~~~~GIIpRal~~LF~~l~~~-----~~~~sV~vS~lEIYnE~i~DL 201 (1051)
|+|||+||||||||||||||||+|+ +.++|||||++.+||..+... ...|.|+|||+|||||+|+||
T Consensus 95 l~G~N~tifAYGqTGSGKTyTM~G~--------~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DL 166 (388)
T 3bfn_A 95 LEGQNASVLAYGPTGAGKTHTMLGS--------PEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDL 166 (388)
T ss_dssp TTTCCEEEEEESCTTSSHHHHHTBC--------SSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEES
T ss_pred HCCCEEEEEEECCCCCCCCEEEECC--------CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEEH
T ss_conf 1696566761168889997686567--------55664168999999999987423377714899999999988864560
Q ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEE
Q ss_conf 45678888522247986166526999569838548980797899999763210155222235588999705999999998
Q 001572 202 LAQEDHSKSTEDKQKKPISLMEDGKGCVVVRGLEEEAVYSANDIYTILERGSAKRRTADTLLNKRSSRSHSVFSITVHIK 281 (1051)
Q Consensus 202 L~~~~~~~~~~~~~~~~l~i~ed~~~gv~V~gL~e~~V~s~~e~~~lL~~G~~~R~~~~T~~N~~SSRSH~IftI~i~~~ 281 (1051)
|++.. ..+.|++|+.++++|.||+++.|.+++|++.+|..|..+|.+++|.||..|||||+||+|+|...
T Consensus 167 L~~~~----------~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~ 236 (388)
T 3bfn_A 167 LDPAS----------GDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQR 236 (388)
T ss_dssp SSCSS----------CBCCCEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEE
T ss_pred HCCCC----------CCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEE
T ss_conf 01678----------88459986999988536059995899999999999750265223647787777739999999982
Q ss_pred ECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCC
Q ss_conf 43469842167622347638898644467891134688877555289999999998619999768998202344200599
Q 001572 282 EAAVGDEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSAHIPYRDSKLTRLLRDSLGG 361 (1051)
Q Consensus 282 ~~~~~~~~~~~~skL~lVDLAGSEr~~ksga~~~r~~Ea~~INkSL~aLg~VI~aL~~~~~hIPYRdSKLTrLLqdsLGG 361 (1051)
...... ....|+|+|||||||||..++++.|.|++|++.||+||++||+||.+|+++..||||||||||+||||||||
T Consensus 237 ~~~~~~--~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLTrlLqdsLgG 314 (388)
T 3bfn_A 237 ERLAPF--RQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGG 314 (388)
T ss_dssp ESSTTC--CEEEEEEEEEECCCTTC--------------CCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTTTSSST
T ss_pred CCCCCC--CEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 268887--336889999989877665545675511477767506399999999999669998867565889999986089
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 84000776238997776866879999998300445553101158799999999999999999999
Q 001572 362 KTKTCIIATISPSAHSLEETMSTLDYAYRAKNIKNKPEANQKMSKAVLLKDLYLEIERMKEDVRA 426 (1051)
Q Consensus 362 nskT~iIatISP~~~~~eETLsTL~fA~RAk~Ikn~p~iN~~~~k~~lik~l~~Ei~~Lk~el~~ 426 (1051)
|++|+|||||||+..+++||++||+||.|||+|+|+|.+|+.....++. ++.+++++|.+
T Consensus 315 nskT~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~~~~~l~-----~~k~~~~~l~~ 374 (388)
T 3bfn_A 315 SAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESLQPHALG-----PVKLSQKELLG 374 (388)
T ss_dssp TCEEEEEEEECCSGGGHHHHHHHHHHHCSEEEEC-------------------------------
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH-----HHHHHHHHHHC
T ss_conf 9628999997985000899999999999985175767356789989998-----87889998617
No 8
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=1.00 E-value=1 Score=722.73 Aligned_cols=336 Identities=45% Similarity=0.725 Sum_probs=308.3
Q ss_pred CCCEEEEEEECCCCCHHHHCCCCCEEEECCCCCEEEEEECCC------CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 995389998099993343129991898439963589971357------87767167437121998520124444246689
Q 001572 50 EVNVQVLLRCRPLSDDEQKSNVPRVISCSEDKREVTVLQSVA------NKQIDRVFTFDKVFGPKAQQRSIYDQAIVPIV 123 (1051)
Q Consensus 50 ~~nV~V~vRvRP~~~~E~~~~~~~vv~~~~~~~~v~v~~~~~------~~~~~k~F~FD~VF~~~asQ~~Vy~~~v~plV 123 (1051)
..||+|+|||||++.+|...+...++.+.+....+.+..+.. .....+.|.||+||+++++|++||+.++.|+|
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv 82 (350)
T 2vvg_A 3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFDAVYDQTSCNYGIFQASFKPLI 82 (350)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECSEEECTTCCHHHHHHHTTHHHH
T ss_pred CCCEEEEEEECCCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHH
T ss_conf 99869999909799133204995389984999889996045544334457785276678897997610689987899999
Q ss_pred HHHHCCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--CCCCCCCEEEEEEEECCCCCCC
Q ss_conf 98633997205610589999441312688899999987776515779999977753--0367630799999875610123
Q 001572 124 NEVLDGFNCTVFAYGQTGTGKTYTMEGGMRNKGGDLPAEAGVIPRAVRQIFDTLEA--QNADYSMKVSFLELYNEDITDL 201 (1051)
Q Consensus 124 ~~vl~G~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~~~~~GIIpRal~~LF~~l~~--~~~~~sV~vS~lEIYnE~i~DL 201 (1051)
+.+|+|||+||||||||||||||||+|+ +.++|||||++++||..++. .+..|.|++||+|||||+|+||
T Consensus 83 ~~~l~G~n~tifAYGqTGSGKTyTm~G~--------~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DL 154 (350)
T 2vvg_A 83 DAVLEGFNSTIFAYGQTGAGKTWTMGGN--------KEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDL 154 (350)
T ss_dssp HHHHTTCCEEEEEECSTTSSHHHHHTBC--------SSSBCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEET
T ss_pred HHHHCCCCEEEEEECCCCCCCCEEEECC--------CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEC
T ss_conf 9985788526886468999998785358--------76675588999999999986536875799999999928788885
Q ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEE
Q ss_conf 45678888522247986166526999569838548980797899999763210155222235588999705999999998
Q 001572 202 LAQEDHSKSTEDKQKKPISLMEDGKGCVVVRGLEEEAVYSANDIYTILERGSAKRRTADTLLNKRSSRSHSVFSITVHIK 281 (1051)
Q Consensus 202 L~~~~~~~~~~~~~~~~l~i~ed~~~gv~V~gL~e~~V~s~~e~~~lL~~G~~~R~~~~T~~N~~SSRSH~IftI~i~~~ 281 (1051)
|++. ..+.+++|+.++++|.|++++.|.+++|++.+|..|..+|++++|.||..|||||+||+|+|...
T Consensus 155 L~~~-----------~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~ 223 (350)
T 2vvg_A 155 IKNN-----------TKLPLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECS 223 (350)
T ss_dssp TTTE-----------EEECEEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEE
T ss_pred CCCC-----------CCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEE
T ss_conf 5677-----------68425674899888158779974999999999999984146001457888876529999999995
Q ss_pred ECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCC
Q ss_conf 43469842167622347638898644467891134688877555289999999998619999768998202344200599
Q 001572 282 EAAVGDEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSAHIPYRDSKLTRLLRDSLGG 361 (1051)
Q Consensus 282 ~~~~~~~~~~~~skL~lVDLAGSEr~~ksga~~~r~~Ea~~INkSL~aLg~VI~aL~~~~~hIPYRdSKLTrLLqdsLGG 361 (1051)
+.. .+....+.|+|+|||||||||..++++.|.|++|+..||+||++||+||.+|+++..||||||||||+||||+|||
T Consensus 224 ~~~-~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgG 302 (350)
T 2vvg_A 224 EVI-ENKEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGG 302 (350)
T ss_dssp EC-----CEEEEEEEEEEECCCCCC---------------CTTHHHHHHHHHHHHHHHTCSSCCGGGCHHHHHTTTTTTS
T ss_pred ECC-CCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 046-7876178899999968988755445650778899988758999999999999738998876455888998986089
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 84000776238997776866879999998300445553101158
Q 001572 362 KTKTCIIATISPSAHSLEETMSTLDYAYRAKNIKNKPEANQKMS 405 (1051)
Q Consensus 362 nskT~iIatISP~~~~~eETLsTL~fA~RAk~Ikn~p~iN~~~~ 405 (1051)
|++|+||+||||+..+++||++||+||.|||+|+|+|.+|+++.
T Consensus 303 nskt~mI~~isP~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~~ 346 (350)
T 2vvg_A 303 NSKTLMCANISPASTNYDETMSTLRYADRAKQIKNKPRINEDPK 346 (350)
T ss_dssp SSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCBSCT
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCH
T ss_conf 96289999968840018999999999999854456661257820
No 9
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=1.00 E-value=1 Score=712.66 Aligned_cols=336 Identities=38% Similarity=0.606 Sum_probs=302.4
Q ss_pred CCCEEEEEEECCCCCHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCEEEECCCCCCCC--------CCHHHHHHHHHHH
Q ss_conf 99538999809999334312999189843996358997135787767167437121998--------5201244442466
Q 001572 50 EVNVQVLLRCRPLSDDEQKSNVPRVISCSEDKREVTVLQSVANKQIDRVFTFDKVFGPK--------AQQRSIYDQAIVP 121 (1051)
Q Consensus 50 ~~nV~V~vRvRP~~~~E~~~~~~~vv~~~~~~~~v~v~~~~~~~~~~k~F~FD~VF~~~--------asQ~~Vy~~~v~p 121 (1051)
..+|+|+|||||++.+|...+...++.+.+.. +.+..+.......+.|+||+||++. ++|++||+.++.|
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~--~~i~~~~~~~~~~~~f~FD~vf~~~~~~~~~~~asQ~~Vy~~~~~p 80 (366)
T 2zfi_A 3 GASVKVAVRVRPFNSREMSRDSKCIIQMSGST--TTIVNPKQPKETPKSFSFDYSYWSHTSPEDINYASQKQVYRDIGEE 80 (366)
T ss_dssp -CCEEEEEEECCCCHHHHHTTCCBCEEEETTE--EEECCTTCTTSCCEEEECSEEEECSSCTTSSSCCCHHHHHHHTHHH
T ss_pred CCCCEEEEECCCCCHHHCCCCCCEEEEECCCC--EEEECCCCCCCCCEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99808999889998355157997699977996--7995367777776278624696057666544567699999999999
Q ss_pred HHHHHHCCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC---CCCCCCEEEEEEEECCCC
Q ss_conf 89986339972056105899994413126888999999877765157799999777530---367630799999875610
Q 001572 122 IVNEVLDGFNCTVFAYGQTGTGKTYTMEGGMRNKGGDLPAEAGVIPRAVRQIFDTLEAQ---NADYSMKVSFLELYNEDI 198 (1051)
Q Consensus 122 lV~~vl~G~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~~~~~GIIpRal~~LF~~l~~~---~~~~sV~vS~lEIYnE~i 198 (1051)
+|+.+|+|||+||||||||||||||||+|+.. ...+|||||++++||..++.. +..|.|+|||+|||||+|
T Consensus 81 lv~~~l~G~N~tifAYGqTGSGKTyTm~G~~~------~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v 154 (366)
T 2zfi_A 81 MLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQE------KDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERV 154 (366)
T ss_dssp HHHHHHTTCCEEEEEECSTTSSHHHHHTBCSG------GGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEE
T ss_pred HHHHHHCCCEEEEEEECCCCCCCCEEEECCCC------CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCEE
T ss_conf 99997469714899858999988458647876------577866999999999987640267706999999999608847
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 12345678888522247986166526999569838548980797899999763210155222235588999705999999
Q 001572 199 TDLLAQEDHSKSTEDKQKKPISLMEDGKGCVVVRGLEEEAVYSANDIYTILERGSAKRRTADTLLNKRSSRSHSVFSITV 278 (1051)
Q Consensus 199 ~DLL~~~~~~~~~~~~~~~~l~i~ed~~~gv~V~gL~e~~V~s~~e~~~lL~~G~~~R~~~~T~~N~~SSRSH~IftI~i 278 (1051)
+|||++.. +..+.+++++.+|++|.||+++.|.+++|++.+|..|.++|.+++|.||..|||||+||+|.|
T Consensus 155 ~DLL~~~~---------~~~l~ire~~~~g~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v 225 (366)
T 2zfi_A 155 RDLLNPKN---------KGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIF 225 (366)
T ss_dssp EETTCTTT---------CSCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEE
T ss_pred EECCCCCC---------CCCCEEEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEE
T ss_conf 89123556---------788568886999879769899997799999999999762246112657777776459999999
Q ss_pred EEEECCCC-CCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC------------CCCCC
Q ss_conf 99843469-842167622347638898644467891134688877555289999999998619------------99976
Q 001572 279 HIKEAAVG-DEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEH------------SAHIP 345 (1051)
Q Consensus 279 ~~~~~~~~-~~~~~~~skL~lVDLAGSEr~~ksga~~~r~~Ea~~INkSL~aLg~VI~aL~~~------------~~hIP 345 (1051)
.+...... +....+.|+|+|||||||||..++++.|.|++|+..||+||++||+||.+|++. ..|||
T Consensus 226 ~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvP 305 (366)
T 2zfi_A 226 TQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIP 305 (366)
T ss_dssp EEEEECTTTTCEEEEEEEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CC
T ss_pred EEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 99604677875413676899996898864554678763004465676789999999999871234543333456677464
Q ss_pred CCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 899820234420059984000776238997776866879999998300445553101
Q 001572 346 YRDSKLTRLLRDSLGGKTKTCIIATISPSAHSLEETMSTLDYAYRAKNIKNKPEANQ 402 (1051)
Q Consensus 346 YRdSKLTrLLqdsLGGnskT~iIatISP~~~~~eETLsTL~fA~RAk~Ikn~p~iN~ 402 (1051)
|||||||+||||+||||++|+|||||||+..+++||++||+||.|||+|+|+|.++.
T Consensus 306 yRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~~~~~~ 362 (366)
T 2zfi_A 306 YRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNTVSVNH 362 (366)
T ss_dssp GGGSHHHHHTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC----------
T ss_pred CCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 333288999998728996099999968873349999999999999840558888999
No 10
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=1.00 E-value=1 Score=708.11 Aligned_cols=337 Identities=45% Similarity=0.693 Sum_probs=305.9
Q ss_pred CCCCEEEEEEECCCCCHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 99953899980999933431299918984399635899713578776716743712199852012444424668998633
Q 001572 49 KEVNVQVLLRCRPLSDDEQKSNVPRVISCSEDKREVTVLQSVANKQIDRVFTFDKVFGPKAQQRSIYDQAIVPIVNEVLD 128 (1051)
Q Consensus 49 ~~~nV~V~vRvRP~~~~E~~~~~~~vv~~~~~~~~v~v~~~~~~~~~~k~F~FD~VF~~~asQ~~Vy~~~v~plV~~vl~ 128 (1051)
...+|+|+|||||++..|...+...++.+.++.. +.+. .....+.|.||+||+++++|++||+.++.|+|+.+|+
T Consensus 4 ~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~-~~~~----~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~ 78 (355)
T 1goj_A 4 SANSIKVVARFRPQNRVEIESGGQPIVTFQGPDT-CTVD----SKEAQGSFTFDRVFDMSCKQSDIFDFSIKPTVDDILN 78 (355)
T ss_dssp SSCBCEEEEEECCCCHHHHTTTCCBCEEECSTTE-EEEC----STTCCEEEECSEEECTTCCHHHHHHHHTHHHHHHHTT
T ss_pred CCCCEEEEEECCCCCHHHHHCCCCEEEEECCCCE-EEEC----CCCCCCEEEECEEECCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 9998699998899995785069963999869984-9972----6897527761959899876279999999999999857
Q ss_pred CCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC--CCCCCCEEEEEEEECCCCCCCCCCCC
Q ss_conf 9972056105899994413126888999999877765157799999777530--36763079999987561012345678
Q 001572 129 GFNCTVFAYGQTGTGKTYTMEGGMRNKGGDLPAEAGVIPRAVRQIFDTLEAQ--NADYSMKVSFLELYNEDITDLLAQED 206 (1051)
Q Consensus 129 G~N~tIfAYGqTGSGKTyTM~G~~~~~~~~~~~~~GIIpRal~~LF~~l~~~--~~~~sV~vS~lEIYnE~i~DLL~~~~ 206 (1051)
|||+||||||||||||||||+|+.. +.+..+|||||++++||..+... +.+|.|++||+|||||+|+|||++..
T Consensus 79 G~n~tifAYGqTGSGKTyTm~G~~~----~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~ 154 (355)
T 1goj_A 79 GYNGTVFAYGQTGAGKSYTMMGTSI----DDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQN 154 (355)
T ss_dssp TCCEEEEEECSTTSSHHHHHTBSCT----TSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTC
T ss_pred CCCCEEEEECCCCCCCCEEEECCCC----CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCC
T ss_conf 9822288889999986067515788----776668706799999999987145685089999999997897788445766
Q ss_pred CCCCCCCCCCCCEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC
Q ss_conf 88852224798616652699956983854898079789999976321015522223558899970599999999843469
Q 001572 207 HSKSTEDKQKKPISLMEDGKGCVVVRGLEEEAVYSANDIYTILERGSAKRRTADTLLNKRSSRSHSVFSITVHIKEAAVG 286 (1051)
Q Consensus 207 ~~~~~~~~~~~~l~i~ed~~~gv~V~gL~e~~V~s~~e~~~lL~~G~~~R~~~~T~~N~~SSRSH~IftI~i~~~~~~~~ 286 (1051)
..+.+++++.++++|.|++++.|.+++|++.+|..|..+|++++|.+|..|||||+||+|++.......+
T Consensus 155 ----------~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~ 224 (355)
T 1goj_A 155 ----------DNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVETG 224 (355)
T ss_dssp ----------CSCCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETTTT
T ss_pred ----------CCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCC
T ss_conf ----------7852688589999606877995799999999999997524723344789877760999999999606889
Q ss_pred CCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHCCCCCCCE
Q ss_conf 842167622347638898644467891134688877555289999999998619-9997689982023442005998400
Q 001572 287 DEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEH-SAHIPYRDSKLTRLLRDSLGGKTKT 365 (1051)
Q Consensus 287 ~~~~~~~skL~lVDLAGSEr~~ksga~~~r~~Ea~~INkSL~aLg~VI~aL~~~-~~hIPYRdSKLTrLLqdsLGGnskT 365 (1051)
..+.|+|+|||||||||..++++.|.|++|+..||+||++||+||.+|+++ ..|||||||||||||||+||||++|
T Consensus 225 ---~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGns~t 301 (355)
T 1goj_A 225 ---SAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRT 301 (355)
T ss_dssp ---EEEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEE
T ss_pred ---CEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCE
T ss_conf ---55665799998988774432466026678887651679999999999864899988775579999999972899768
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
Q ss_conf 077623899777686687999999830044555310115879
Q 001572 366 CIIATISPSAHSLEETMSTLDYAYRAKNIKNKPEANQKMSKA 407 (1051)
Q Consensus 366 ~iIatISP~~~~~eETLsTL~fA~RAk~Ikn~p~iN~~~~k~ 407 (1051)
+||+||||+..+++||++||+||.|||+|+|+|.+|+..+..
T Consensus 302 ~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~vn~~~~~~ 343 (355)
T 1goj_A 302 TLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELSPA 343 (355)
T ss_dssp EEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCSSSSCS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHH
T ss_conf 999997963026999999999999972366775567879999
Done!