Your job contains 1 sequence.
>001573
MDLPRVKRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLV
CAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEW
FFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLP
VQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKK
LPWLKYDMKKAEYIAAKEQEKDAKKKLDEAANTLHEFSKPIEGKKQEKAILDGDCKKLSS
LINENSKRRMDFLEKVDQVGVQVQGKYKEMQELRRQEQSRQQRILKAREELAAAELDLQT
VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN
NKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYI
WKSFITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFD
APHAVKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSA
SVEPVNQSRLLLCSVDGNEIERLRSKKKKLEESVDELEESLKSMQTEQRLIEDEAAKLQK
EREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKY
AIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEV
EHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNIL
QEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM
AVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLT
NCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNI
MNGPWIEQPSKVWSSGECWGTVTGLVGESRC
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001573
(1051 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2146107 - symbol:SMC5 "AT5G15920" species:3702... 3541 0. 1
DICTYBASE|DDB_G0290919 - symbol:smc5 "AAA ATPase domain-c... 777 2.6e-124 2
UNIPROTKB|D4A4D0 - symbol:Smc5 "Protein Smc5" species:101... 1221 3.0e-124 1
UNIPROTKB|F1PEG5 - symbol:SMC5 "Uncharacterized protein" ... 1211 3.5e-123 1
ZFIN|ZDB-GENE-061013-288 - symbol:smc5 "structural mainte... 1193 2.8e-121 1
UNIPROTKB|Q5ZJY5 - symbol:SMC5 "Structural maintenance of... 1119 1.9e-113 1
UNIPROTKB|Q805A1 - symbol:smc5 "Structural maintenance of... 1099 2.6e-111 1
UNIPROTKB|F1P1S9 - symbol:SMC5 "Structural maintenance of... 1081 2.1e-109 1
UNIPROTKB|F1P1S0 - symbol:SMC5 "Structural maintenance of... 1078 4.3e-109 1
UNIPROTKB|F1NK20 - symbol:SMC5 "Structural maintenance of... 1074 1.1e-108 1
RGD|1307492 - symbol:Smc5 "structural maintenance of chro... 608 5.4e-106 2
UNIPROTKB|Q8IY18 - symbol:SMC5 "Structural maintenance of... 613 1.8e-102 3
POMBASE|SPAC14C4.02c - symbol:smc5 "Smc5-6 complex SMC su... 468 5.8e-80 2
ASPGD|ASPL0000076401 - symbol:AN8742 species:162425 "Emer... 425 8.4e-71 2
FB|FBgn0052438 - symbol:Smc5 "Smc5" species:7227 "Drosoph... 454 4.7e-66 2
UNIPROTKB|F1MPW4 - symbol:SMC5 "Uncharacterized protein" ... 685 4.7e-65 1
WB|WBGene00016151 - symbol:smc-5 species:6239 "Caenorhabd... 423 9.6e-65 2
UNIPROTKB|Q802R9 - symbol:smc5 "Structural maintenance of... 679 2.3e-64 1
SGD|S000005394 - symbol:SMC5 "Component of the SMC5-SMC6 ... 412 1.7e-63 2
UNIPROTKB|D4A6A4 - symbol:Smc5 "Protein Smc5" species:101... 668 5.0e-63 1
MGI|MGI:2385088 - symbol:Smc5 "structural maintenance of ... 665 1.1e-62 1
UNIPROTKB|J9P883 - symbol:SMC5 "Uncharacterized protein" ... 657 9.7e-62 1
UNIPROTKB|F1SJC8 - symbol:LOC100515003 "Uncharacterized p... 578 2.4e-55 1
UNIPROTKB|F1P1S3 - symbol:SMC5 "Structural maintenance of... 594 1.1e-54 1
UNIPROTKB|F1P1S2 - symbol:SMC5 "Structural maintenance of... 594 1.1e-54 1
UNIPROTKB|F1P1S7 - symbol:SMC5 "Structural maintenance of... 588 5.0e-54 1
ZFIN|ZDB-GENE-040426-1624 - symbol:pufa "PUF (Pumilio/FBF... 487 5.9e-51 2
CGD|CAL0001481 - symbol:SMC5 species:5476 "Candida albica... 413 8.1e-35 1
UNIPROTKB|Q59UE8 - symbol:SMC5 "Potential nuclear DNA rep... 413 8.1e-35 1
UNIPROTKB|Q6P9I7 - symbol:smc6 "Structural maintenance of... 213 4.1e-29 3
UNIPROTKB|Q96SB8 - symbol:SMC6 "Structural maintenance of... 216 7.1e-29 3
RGD|1311214 - symbol:Smc6 "structural maintenance of chro... 215 1.2e-28 3
UNIPROTKB|E1BFH7 - symbol:SMC6 "Uncharacterized protein" ... 229 9.0e-28 4
MGI|MGI:1914491 - symbol:Smc6 "structural maintenance of ... 215 1.1e-27 4
UNIPROTKB|F1SCS4 - symbol:SMC6 "Uncharacterized protein" ... 216 3.3e-27 3
UNIPROTKB|E2QUA0 - symbol:SMC6 "Uncharacterized protein" ... 215 7.1e-27 4
UNIPROTKB|E1BWW3 - symbol:SMC6 "Uncharacterized protein" ... 206 7.5e-27 3
UNIPROTKB|Q802R8 - symbol:smc6 "Structural maintenance of... 202 6.4e-26 3
ZFIN|ZDB-GENE-070705-287 - symbol:si:dkey-119f1.1 "si:dke... 201 8.2e-26 3
TAIR|locus:2161163 - symbol:MIM "AT5G61460" species:3702 ... 217 3.6e-25 2
DICTYBASE|DDB_G0288993 - symbol:smc6 "AAA ATPase domain-c... 199 2.2e-23 3
ASPGD|ASPL0000035336 - symbol:AN10415 species:162425 "Eme... 204 3.7e-23 3
UNIPROTKB|I3L795 - symbol:I3L795 "Uncharacterized protein... 272 2.0e-22 1
UNIPROTKB|Q9X0R4 - symbol:smc "Chromosome partition prote... 208 1.1e-21 4
FB|FBgn0039164 - symbol:CG5524 species:7227 "Drosophila m... 198 1.1e-20 3
TAIR|locus:2160289 - symbol:SMC6A "structural maintenance... 166 2.4e-20 3
POMBASE|SPCC5E4.06 - symbol:smc6 "Smc5-6 complex SMC subu... 180 4.6e-19 4
GENEDB_PFALCIPARUM|MAL13P1.96 - symbol:MAL13P1.96 "chromo... 191 2.8e-18 3
UNIPROTKB|Q8IED2 - symbol:MAL13P1.96 "Structural maintena... 191 2.8e-18 3
CGD|CAL0003255 - symbol:SMC6 species:5476 "Candida albica... 181 5.4e-18 2
FB|FBgn0015615 - symbol:Cap "Chromosome-associated protei... 166 9.4e-18 3
UNIPROTKB|Q81ZL2 - symbol:smc "Chromosome partition prote... 182 2.2e-17 3
TIGR_CMR|CBU_0540 - symbol:CBU_0540 "SMC family protein" ... 182 2.2e-17 3
UNIPROTKB|F1SRP0 - symbol:SMC2 "Structural maintenance of... 167 3.5e-17 4
TAIR|locus:2079107 - symbol:ATSMC2 "AT3G47460" species:37... 148 2.0e-16 3
GENEDB_PFALCIPARUM|PF11_0317 - symbol:PF11_0317 "structur... 157 1.0e-15 3
UNIPROTKB|Q8II57 - symbol:PF11_0317 "Structural maintenan... 157 1.0e-15 3
UNIPROTKB|F1SP73 - symbol:F1SP73 "Uncharacterized protein... 179 1.1e-15 4
UNIPROTKB|E2R7R8 - symbol:SMC2 "Structural maintenance of... 156 1.3e-15 4
DICTYBASE|DDB_G0284499 - symbol:smc2 "structural maintena... 158 1.6e-15 3
MGI|MGI:106067 - symbol:Smc2 "structural maintenance of c... 154 2.7e-15 3
UNIPROTKB|I3LM67 - symbol:LOC100738089 "Uncharacterized p... 203 4.8e-15 1
UNIPROTKB|O95347 - symbol:SMC2 "Structural maintenance of... 158 5.1e-15 4
UNIPROTKB|F1MY41 - symbol:SMC2 "Structural maintenance of... 155 5.2e-15 4
UNIPROTKB|D4A5Q2 - symbol:Smc2 "Structural maintenance of... 155 6.5e-15 4
RGD|1305227 - symbol:Smc2 "structural maintenance of chro... 155 7.5e-15 4
GENEDB_PFALCIPARUM|PFD0685c - symbol:PFD0685c "chromosome... 152 1.1e-14 3
UNIPROTKB|Q8I1U7 - symbol:PFD0685c "Structural maintenanc... 152 1.1e-14 3
TAIR|locus:2167973 - symbol:SMC2 "AT5G62410" species:3702... 146 2.3e-14 3
UNIPROTKB|O93309 - symbol:smc3 "Structural maintenance of... 159 5.1e-14 2
ZFIN|ZDB-GENE-030131-105 - symbol:smc2 "structural mainte... 138 1.5e-13 3
TAIR|locus:2045159 - symbol:TTN7 "AT2G27170" species:3702... 118 3.3e-13 3
UNIPROTKB|E1C610 - symbol:E1C610 "Structural maintenance ... 130 5.4e-13 3
POMBASE|SPAC10F6.09c - symbol:psm3 "mitotic cohesin compl... 134 5.6e-13 3
UNIPROTKB|Q97QG7 - symbol:smc "Chromosome partition prote... 172 7.6e-13 3
FB|FBgn0027783 - symbol:SMC2 "SMC2" species:7227 "Drosoph... 132 1.0e-12 2
SGD|S000001927 - symbol:SMC2 "Subunit of the condensin co... 137 1.3e-12 3
UNIPROTKB|Q90988 - symbol:SMC2 "Structural maintenance of... 129 1.9e-12 3
WB|WBGene00010056 - symbol:smc-6 species:6239 "Caenorhabd... 141 2.4e-12 3
ZFIN|ZDB-GENE-030131-3196 - symbol:smc3 "structural maint... 134 3.1e-12 3
UNIPROTKB|E1C614 - symbol:E1C614 "Uncharacterized protein... 133 3.2e-12 3
TIGR_CMR|CHY_1443 - symbol:CHY_1443 "chromosome segregati... 165 3.4e-12 3
UNIPROTKB|G3N365 - symbol:SMC3 "Structural maintenance of... 135 4.8e-12 3
UNIPROTKB|E2QRT5 - symbol:SMC1B "Structural maintenance o... 132 6.6e-12 3
UNIPROTKB|F1NEA6 - symbol:SMC3 "Uncharacterized protein" ... 134 9.9e-12 3
SGD|S000004375 - symbol:SMC6 "Component of the SMC5-SMC6 ... 150 1.0e-11 3
UNIPROTKB|A7Z065 - symbol:SMC3 "Structural maintenance of... 132 1.0e-11 3
UNIPROTKB|E2R7T4 - symbol:SMC3 "Uncharacterized protein" ... 132 1.0e-11 3
UNIPROTKB|Q9UQE7 - symbol:SMC3 "Structural maintenance of... 132 1.0e-11 3
UNIPROTKB|Q5R4K5 - symbol:SMC3 "Structural maintenance of... 132 1.0e-11 3
MGI|MGI:1339795 - symbol:Smc3 "structural maintenance of ... 132 1.0e-11 3
UNIPROTKB|D4A1B9 - symbol:Smc3 "Structural maintenance of... 132 1.0e-11 3
UNIPROTKB|O97594 - symbol:SMC3 "Structural maintenance of... 132 1.0e-11 3
UNIPROTKB|E1C612 - symbol:E1C612 "Uncharacterized protein... 131 1.1e-11 3
UNIPROTKB|E1C782 - symbol:E1C782 "Uncharacterized protein... 126 1.2e-11 3
UNIPROTKB|F1NDN4 - symbol:SMC4 "Structural maintenance of... 138 1.3e-11 4
UNIPROTKB|F1P3C6 - symbol:SMC4 "Structural maintenance of... 138 1.4e-11 4
ZFIN|ZDB-GENE-090506-9 - symbol:smc1a "structural mainten... 132 1.5e-11 4
WB|WBGene00004873 - symbol:smc-3 species:6239 "Caenorhabd... 135 2.2e-11 3
UNIPROTKB|F1NYB2 - symbol:SMC3 "Uncharacterized protein" ... 134 2.5e-11 3
WARNING: Descriptions of 294 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2146107 [details] [associations]
symbol:SMC5 "AT5G15920" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR027131 InterPro:IPR003395 Pfam:PF02463 GO:GO:0009506
EMBL:CP002688 EMBL:AL391145 GO:GO:0007062 PANTHER:PTHR19306:SF1
OMA:GMDPRNE IPI:IPI00520383 PIR:T51375 RefSeq:NP_197096.1
UniGene:At.31737 ProteinModelPortal:Q9LFS8 SMR:Q9LFS8 STRING:Q9LFS8
PRIDE:Q9LFS8 EnsemblPlants:AT5G15920.1 GeneID:831449
KEGG:ath:AT5G15920 TAIR:At5g15920 HOGENOM:HOG000006187
InParanoid:Q9LFS8 PhylomeDB:Q9LFS8 ProtClustDB:CLSN2686110
ArrayExpress:Q9LFS8 Genevestigator:Q9LFS8 Uniprot:Q9LFS8
Length = 1053
Score = 3541 (1251.6 bits), Expect = 0., P = 0.
Identities = 694/1048 (66%), Positives = 812/1048 (77%)
Query: 5 RVKRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIA 64
R KR K+SRGEDD++PGNIIEIELHNFMTF+HL+CKPGSRLNLVIGPNGSGKSSLVCAIA
Sbjct: 5 RAKRPKISRGEDDFLPGNIIEIELHNFMTFNHLVCKPGSRLNLVIGPNGSGKSSLVCAIA 64
Query: 65 LALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNG 124
L LGG+ QLLGRATS+GAYVKRGE+SGY+KISLRG+T+EE+LTI RKIDTRNKSEW FNG
Sbjct: 65 LCLGGEPQLLGRATSVGAYVKRGEDSGYVKISLRGNTREENLTIFRKIDTRNKSEWMFNG 124
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHC 184
V K +++EI ++FNIQVNNLTQFLPQDRVCEFAKL+PV+LLEETEKAVGDPQLPV H
Sbjct: 125 STVSKKDIVEIIQKFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPVHHR 184
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
ALVEKS LK +E V +NG+TLNQLKAL EQEKDVERVRQR L KV+SMKKKLPWL
Sbjct: 185 ALVEKSRDLKQLERAVAKNGETLNQLKALVDEQEKDVERVRQRELFLTKVDSMKKKLPWL 244
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINE 304
KYDMKKAEY+ L+ +PIE +K+EKA D CKK+ +L++
Sbjct: 245 KYDMKKAEYMDAKKRMKEAEKKLDEAAKNLNSMKEPIEKQKKEKAETDSKCKKVKNLMDA 304
Query: 305 NSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY 364
N + R LEK D YK ILKA Q +P Y
Sbjct: 305 NGRNRCHLLEKEDEADARVVATYKELEELKKQEEHRQERILKATEDLVAAERELQNLPVY 364
Query: 365 EPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
E P K+E+L SQ+ EL N K+ QK + EK+L+Q + TLRQC D+LKDME+ NNKLL
Sbjct: 365 ERPVAKLEELSSQVTELHHSINGKKNQKEDNEKLLSQKRYTLRQCVDKLKDMENANNKLL 424
Query: 425 HALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSF 484
AL NSGA+ IF+AY W+QQ+RHE +E YGPVL+EVNV NR +A +LE HV YIWKSF
Sbjct: 425 KALANSGADRIFDAYQWVQQNRHEFKREVYGPVLVEVNVPNRENACFLEGHVSFYIWKSF 484
Query: 485 ITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHA 544
ITQD DRD L KNLK FDVP+LNYV N ++K PF IS++MR+LGI ARLDQ+FDAP A
Sbjct: 485 ITQDPEDRDLLVKNLKRFDVPVLNYVGNSGNQKAPFHISDQMRSLGIHARLDQIFDAPDA 544
Query: 545 VKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVEP 604
VKEVL SQFGL+ SYIGSK TDQ+A+ V KLGI DFWTP+NHYRWS SRYGGH SASV+
Sbjct: 545 VKEVLNSQFGLEDSYIGSKITDQRAEEVYKLGIKDFWTPDNHYRWSSSRYGGHSSASVDS 604
Query: 605 VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREE 664
V QSRLLLC VD +QTEQR +E+EAAKL KEREE
Sbjct: 605 VYQSRLLLCGVDVGELEKLRSRKEELEDSILFMEETHKSLQTEQRRLEEEAAKLHKEREE 664
Query: 665 IINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEI 724
I+N+ +EK+KRRE+E+ RK KLES+E+E+D++ ++AKL+DQA+ N ++ YAI +
Sbjct: 665 IVNVSYLEKKKRRELESRYQQRKTKLESLEQEEDMDASVAKLIDQASRANADRYTYAINL 724
Query: 725 KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR 784
K LLVE V+ KWSYAEKHMASIE + KIRE E N+KQ+EK A Q SL E CKKEVE +
Sbjct: 725 KKLLVEAVAHKWSYAEKHMASIELERKIRESEINIKQYEKTAQQLSLAVEYCKKEVEGKQ 784
Query: 785 KHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYE 844
+ L+ AKR AES+A ITPEL+KEF+EMPTT+EELEAAIQDN+SQANSI F+N+NILQEYE
Sbjct: 785 QRLATAKRDAESVATITPELKKEFMEMPTTVEELEAAIQDNLSQANSILFINENILQEYE 844
Query: 845 HRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAG 904
HRQ QI +STK E DK++L + EID+LKEKWLPTLR LV QINETFS NFQEMAVAG
Sbjct: 845 HRQSQIYTISTKLETDKRDLSICMKEIDSLKEKWLPTLRQLVGQINETFSHNFQEMAVAG 904
Query: 905 EVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPF 964
EVSLDE ++DFD++GI IKVKFR+SGQL+VLS+HHQSGGERSVSTILYLVSLQDLTNCPF
Sbjct: 905 EVSLDERDTDFDQYGIHIKVKFRESGQLQVLSSHHQSGGERSVSTILYLVSLQDLTNCPF 964
Query: 965 RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1024
RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLP+LEYSEACSILNIMNGP
Sbjct: 965 RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPELEYSEACSILNIMNGP 1024
Query: 1025 WIEQPSKVWSSGECWGTVTGLVGE-SRC 1051
+I +PSKVWS G+ WG++ E S+C
Sbjct: 1025 YIAEPSKVWSLGDSWGSLNRRRTEASQC 1052
>DICTYBASE|DDB_G0290919 [details] [associations]
symbol:smc5 "AAA ATPase domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030915 "Smc5-Smc6
complex" evidence=IEA;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR027131 InterPro:IPR003395 dictyBase:DDB_G0290919
Pfam:PF02463 GO:GO:0005634 GenomeReviews:CM000154_GR GO:GO:0046982
eggNOG:COG1196 GO:GO:0030915 EMBL:AAFI02000172
PANTHER:PTHR19306:SF1 RefSeq:XP_635479.1 ProteinModelPortal:Q54FE3
EnsemblProtists:DDB0231142 GeneID:8627895 KEGG:ddi:DDB_G0290919
InParanoid:Q54FE3 OMA:ILERNEM ProtClustDB:CLSZ2728770
Uniprot:Q54FE3
Length = 1131
Score = 777 (278.6 bits), Expect = 2.6e-124, Sum P(2) = 2.6e-124
Identities = 204/689 (29%), Positives = 340/689 (49%)
Query: 359 QTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED 418
Q +P E +EKL ++ + Q + ++K K + N + ++C+ ++M
Sbjct: 406 QRLPNDEDTKRNVEKLNRELKDCNQQLGELEIEKEAKNRQFN---MINQECTSIQREMSQ 462
Query: 419 KNN---KLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDH 475
NN + L LRN +++ AY WL+Q+++ ++ +GP+ +E+NV N HA +LE
Sbjct: 463 LNNIQAQKLEFLRND-QRDVYSAYEWLRQNQNLFKQKVFGPICMEINVQNPEHAAFLEMT 521
Query: 476 VGHYIWKSFITQDAGDRDFLAKNL----KPFDVPILNYVSNESSRKEPFQISEEMRALGI 531
+ + +F+ Q DR+ N+ K V L VS + E E+ R++G
Sbjct: 522 LSFNLMMTFVFQSMEDRETFHSNIIDNGKKLRVNTL--VSRGGFKMERVNNIEDFRSIGA 579
Query: 532 SARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRWSI 591
+ LD+ F+A VK ++ + S + + D + K I F+TP Y +
Sbjct: 580 THYLDETFEADQVVKNAIMDSIPIFKSIVFDRRALNNEDTITK-HINSFFTPNGSYYTTY 638
Query: 592 SRYGGHVSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLI 651
SRYG + + L ++ ++ +Q I
Sbjct: 639 SRYGDRKPTTRVSNFKVAKWLSGINTGKKDELQEKFRQAKVRLDQERLSAEEIRQKQNQI 698
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
+ +ER + + RR+ + I RKLE + E++I K+ +
Sbjct: 699 TATQRNITEERNKCNATID----DRRKCYSRIQFLARKLEELNTEENIEEEEKKIRQKLR 754
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS- 770
++ ++ EI + L + S + +AK+R E +L + E L+A
Sbjct: 755 EVYAKRADTLSEITDKLRDYFKHMGSRDHTLITLSRLEAKLRSEEDSLAR-ESAKLEADK 813
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEKEFLEMPT-TIEELEAAIQDNISQ 828
+ K + C K K +AE I +T E+++EF + ++EE++ I ++
Sbjct: 814 TRLAELVKYFDDCVKEAKRLKSEAEKIVGPLTLEVQEEFKSISFHSLEEIDREISATETK 873
Query: 829 ANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQ 888
AN I N +L+EYE R+R+I+ + + ++EL+ + L+E WL ++ ++Q
Sbjct: 874 ANFIISNNPKVLEEYEGRKREIQVIEDRISFRQRELQDNDKRMGRLREDWLVPVKEFISQ 933
Query: 889 INETFSRNFQEMAVAGEVSL--DE-HESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGER 945
+N +FS+ F+ + GEV L DE H D+ K+ + I+VKFR L+ L+A QSGGER
Sbjct: 934 VNTSFSQYFKAINCLGEVHLGFDEQHPDDYSKYFVDIRVKFRNEDSLKTLNAQLQSGGER 993
Query: 946 SVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKL 1005
SVST+LYL+SLQDLT CPFRVVDEINQGMDP NER +F+Q+V++ S +PQ FL+TPKL
Sbjct: 994 SVSTMLYLISLQDLTTCPFRVVDEINQGMDPKNERMIFEQIVKSVSSEGSPQYFLITPKL 1053
Query: 1006 LPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
L +L YS ++L + GPW K W+
Sbjct: 1054 LHNLHYSPETTVLCVFTGPWF-MSQKQWN 1081
Score = 472 (171.2 bits), Expect = 2.6e-124, Sum P(2) = 2.6e-124
Identities = 96/239 (40%), Positives = 148/239 (61%)
Query: 17 DYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGR 76
+++ G+I+ I+L+NF+T+ + +PG RLN++IGPNGSGKSS+VCAIAL LGG LLGR
Sbjct: 64 EFVNGSIVRIKLNNFVTYSDVEFRPGPRLNVIIGPNGSGKSSIVCAIALGLGGGPNLLGR 123
Query: 77 ATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTR-NKSEWFFNGKVVPKGEVLEI 135
+G ++K GYI+I L ++ + ++ I R + N SE+ NGK + K +++
Sbjct: 124 QKQLGDFIKNRCSQGYIEIELHNESGDNYI-IRRDLKKEGNGSEFHINGKSISKNDLITT 182
Query: 136 TKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
K+ N+QV+NL QFLPQD+V FA +SP +LL ETEKA+ + H L+ S +
Sbjct: 183 IKKLNVQVDNLCQFLPQDKVVSFASMSPTELLIETEKAININNMYENHQELIRLQSNHQK 242
Query: 196 IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYI 254
T + L+ L N EKDV++ R+R +LLE V+ +K+K W ++ + +I
Sbjct: 243 ESTTFEELKKNLDDLVKKNQSLEKDVDKFRERQKLLEFVDKLKRKRTWAIFENARVAFI 301
Score = 54 (24.1 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 22/102 (21%), Positives = 43/102 (42%)
Query: 808 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 867
F++ E E +Q SQ + + E ++++ D STK + + E+ R
Sbjct: 300 FIKARDDKELAEKTVQHGESQLKPFKSIISEQTKSIEKSRKEVHDNSTKVQQTESEVSR- 358
Query: 868 LAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD 909
L+ D K + + N +A+I+ R+ + V+ D
Sbjct: 359 LSLTDG---KLVIVVENFLAEIDGIQQRDKERKVQIARVTKD 397
Score = 46 (21.3 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 33/132 (25%), Positives = 62/132 (46%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE------DDINTALA 704
I+DE K+Q+ + +EK R E+++ N + +LE IEKE + IN
Sbjct: 398 IQDETTKMQRLPNDEDTKRNVEKLNR-ELKD-CNQQLGELE-IEKEAKNRQFNMINQECT 454
Query: 705 KLVDQAADLN-IQQFKYAIEIKNLLVEIVSC-KWSYAEKHMASIEFDAKIRELEFNLKQH 762
+ + + LN IQ K ++N ++ S +W +++ + I +E N++
Sbjct: 455 SIQREMSQLNNIQAQKLEF-LRNDQRDVYSAYEWLRQNQNLFKQKVFGPIC-MEINVQNP 512
Query: 763 EKLA-LQASLHY 773
E A L+ +L +
Sbjct: 513 EHAAFLEMTLSF 524
Score = 46 (21.3 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 59/258 (22%), Positives = 104/258 (40%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+E + K +ER++++ V KRKR ++ I+ DD LA+ Q
Sbjct: 264 LEKDVDKF-RERQKLLEFVDKLKRKR----TWAIFENARVAFIKARDD--KELAEKTVQH 316
Query: 711 ADLNIQQFKYAIEIKNLLVEIV-------SCKWSYAEKHMASIEF-DAKI--------RE 754
+ ++ FK I + +E S K E ++ + D K+ E
Sbjct: 317 GESQLKPFKSIISEQTKSIEKSRKEVHDNSTKVQQTESEVSRLSLTDGKLVIVVENFLAE 376
Query: 755 LEFNLKQHEK-LALQASLHYEDCKKEVEHCRK--HLSDAKRQAESIAFITPELEKEFLEM 811
++ ++Q +K +Q + +D + E ++ + D KR E +L +E +
Sbjct: 377 ID-GIQQRDKERKVQIARVTKDIQDETTKMQRLPNDEDTKRNVE-------KLNRELKDC 428
Query: 812 PTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE-LKRFLAE 870
+ ELE + Q N I N QE QR++ L+ Q A K E L+ +
Sbjct: 429 NQQLGELEIEKEAKNRQFNMI-----N--QECTSIQREMSQLNNIQ-AQKLEFLRNDQRD 480
Query: 871 IDALKEKWLPTLRNLVAQ 888
+ + E WL +NL Q
Sbjct: 481 VYSAYE-WLRQNQNLFKQ 497
Score = 39 (18.8 bits), Expect = 6.9e-40, Sum P(2) = 6.9e-40
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 659 QKEREEIINIVQIEKRKRR-EMENHINLRKRKLES---IEKE-DDIN 700
QK+ EI+ +EKR R +++N+ N K + I++E DD N
Sbjct: 1077 QKQWNEILKKT-MEKRSGRPQLQNNNNNNNNKNNNKATIQEEFDDEN 1122
>UNIPROTKB|D4A4D0 [details] [associations]
symbol:Smc5 "Protein Smc5" species:10116 "Rattus
norvegicus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0030915 "Smc5-Smc6 complex"
evidence=IEA] InterPro:IPR027131 InterPro:IPR003395 Pfam:PF02463
RGD:1307492 GO:GO:0005524 GO:GO:0007059 GO:GO:0003677 GO:GO:0030261
GO:GO:0009295 PANTHER:PTHR19306:SF1 IPI:IPI00559450
Ensembl:ENSRNOT00000043125 ArrayExpress:D4A4D0 Uniprot:D4A4D0
Length = 1088
Score = 1221 (434.9 bits), Expect = 3.0e-124, P = 3.0e-124
Identities = 304/1034 (29%), Positives = 526/1034 (50%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G +GRA
Sbjct: 48 FVEGSIVRIAMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRA 107
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VKRG G ++I L + +L I R+ID +N+S WF N K V + V E
Sbjct: 108 DKVGFFVKRGCSKGLVEIELFRTSG--NLIITREIDVIKNQSFWFINKKPVTQKIVEEQV 165
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
NIQV NL QFLPQD+V EFAKLS ++LLE TEK++G P++ HC L K K +
Sbjct: 166 AALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQL 225
Query: 197 ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
E + K + L+++ N ++DVER +R L+ +E ++ K PW++Y+ + EY
Sbjct: 226 ETSCKEKTEYLDKMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEGV 285
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMDFL 313
++ IE ++++ L+ K+ ++ I E S K+R D +
Sbjct: 286 KLVRDRVKEEVRKLKEGQIPMTRRIEEIERQRRTLEVRIKEKATDIKEASQKCKQRQDLI 345
Query: 314 EKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEK 373
E+ D K + +P D I
Sbjct: 346 ERKDRHIKELQQALTVKQNEEQDRQKRISNTRKMIEDLQNELRTAENCENLQPQIDAITN 405
Query: 374 LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
++ E + + K ++++L + K R SD + ++ N+ LR +
Sbjct: 406 DLRRVQEEKALCEGEIIDKQREKEMLEKQK---RSVSDHITRFDNLMNQKEDKLRQRYRD 462
Query: 434 NIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRD 493
++A WL+ +R + P++L +N+ + +A Y+E+H+ ++F+ + D +
Sbjct: 463 T-YDAVLWLRNNRDRFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDME 521
Query: 494 FLAKNLKPFDVPILNYVSNES---SRKEPFQISEEMRALGISARLDQVFDAPHAVKEVLI 550
+ ++ +N V + K P + E++ G + L ++FDAP V L
Sbjct: 522 IFLREVRDNKKLRVNAVIAPKISYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLC 581
Query: 551 SQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASVEPVNQSR 609
Q+ + +G++ T ++ + V + + +T E Y S Y V +S + ++
Sbjct: 582 CQYHIHEVPVGTERTRERIERVIQETRLKQIYTAEEKYVLKTSFYSNKVISSNTSLKVAQ 641
Query: 610 LLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIINIV 669
L +VD ++ R +E + +L+ +++E++
Sbjct: 642 FLTVTVDLEQRRHLEEQLKEINRKLEAVDSGLVALRDTNRHLELKDNELRLKKKELLE-- 699
Query: 670 QIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQFKYAIEIKNLL 728
K K+R++E I+ + + +E++ ++ K + ++N+Q+ K E+ L+
Sbjct: 700 --RKTKKRQLEQKISSKLASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLV 757
Query: 729 VEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHEKLAL--QASLHYEDCKKEV-EHCR 784
S + + + ++ +LE + + +L + Q + +D ++ + + C+
Sbjct: 758 KICTSLHIQKVDLILQNTTVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCK 817
Query: 785 KHLSDAKRQAESIA--FITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQN-ILQ 841
+ + A++ A + E + F ++P T++E++A + + S+A+ LN + +++
Sbjct: 818 ELMKRARQVCNLSADQAVPQEFQTAFQDLPNTLDEIDALLTEERSRASCFTGLNPSQVVE 877
Query: 842 EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMA 901
EY R+ +I+ L+ + + K EL + I +KE+WL L+ LV +INE FS F M
Sbjct: 878 EYTKREIEIQQLTEELKGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQ 937
Query: 902 VAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLT 960
AGEV L E+E D+DK+GI I+VKFR S QL L+ HHQSGGERSVST+LYL++LQ+L
Sbjct: 938 CAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELN 997
Query: 961 NCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNI 1020
CPFRVVDEINQGMDPINER++F+ +V A + NT Q F +TPKLL +L YSE ++L +
Sbjct: 998 RCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFV 1057
Query: 1021 MNGPWIEQPSKVWS 1034
NGP + +P++ W+
Sbjct: 1058 YNGPHMLEPNR-WN 1070
>UNIPROTKB|F1PEG5 [details] [associations]
symbol:SMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] InterPro:IPR027131 InterPro:IPR003395
Pfam:PF02463 PANTHER:PTHR19306:SF1 GeneTree:ENSGT00550000074963
EMBL:AAEX03000569 Ensembl:ENSCAFT00000002987 Uniprot:F1PEG5
Length = 1044
Score = 1211 (431.4 bits), Expect = 3.5e-123, P = 3.5e-123
Identities = 305/1038 (29%), Positives = 526/1038 (50%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G +GRA
Sbjct: 3 FVEGSIVRIVMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRA 62
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VKRG G ++I L + +L I R+ID +N+S WF N K + V E
Sbjct: 63 DKVGFFVKRGCSKGMVEIELFRTSG--NLIITREIDVAKNQSSWFINKKSTTQKVVEEQV 120
Query: 137 KRFNIQVNNLTQFLPQ--DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLK 194
NIQV NL QFLPQ D+V EFAKLS ++LLE TEK++G P++ HC L K K
Sbjct: 121 AALNIQVGNLCQFLPQSKDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEK 180
Query: 195 TIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYI 254
+E + K + L ++ N ++DVER +R L+ +E ++ K PW++Y+ + EY
Sbjct: 181 QLETSCKEKTEYLEKMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYE 240
Query: 255 XXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMD 311
++ IE ++++ L+ K+ ++ I E S K++ D
Sbjct: 241 EVKLARDRVKEEVRKLKEGQIPMTRRIEEIERQRHTLEARIKEKATDIKETSQKCKQKQD 300
Query: 312 FLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKI 371
+E+ D K + +P D I
Sbjct: 301 IIERKDKQIEELQQALTVKQNEEHDRQRRISNTRKMIEDLQNELKTTENCENLQPQIDAI 360
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD-MEDKNNKLLHALRNS 430
++ + + + K +++ L + + ++ R + M K +KL R++
Sbjct: 361 TNDLRRVQDEKALCEGEVIDKRGEKESLEKERKSVGDNIVRFDNLMNQKEDKLRQRYRDT 420
Query: 431 GAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAG 490
++A WL+ +R + + P++L +N+ + +A Y+E+H+ ++F+ +
Sbjct: 421 -----YDAVLWLRNNRDKFKQRVCEPIMLTINMKDNKNAKYIENHISSNDLRAFVFESQE 475
Query: 491 DRDFLAKNLKPFDVPILNYV-SNESSR--KEPFQISEEMRALGISARLDQVFDAPHAVKE 547
D + K ++ +N V + +SS K P + E++ G + L ++FDAP V
Sbjct: 476 DMEIFLKEIRDNKKLRVNAVIAPKSSYADKAPSRSLNELKPYGFFSYLRELFDAPDPVMS 535
Query: 548 VLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASVEPVN 606
L + + +G++ T ++ + V + + +T E Y S Y V +S +
Sbjct: 536 FLCCHYHIHEVPVGTERTRERIERVIQETRLKQMYTAEEKYVVKTSFYSNKVISSNTSLK 595
Query: 607 QSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEII 666
++ L +VD + + +E + +L+++++E++
Sbjct: 596 VAQFLTVTVDLEQRRHLEEQLKEINRKLQAVEAGLIALCERNKHLEHKDNELRQKKKELL 655
Query: 667 NIVQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQFKYAIEIK 725
K K+R++E I+ + L+ +E++ ++ K + ++N+Q+ K E+
Sbjct: 656 E----RKTKKRQLEQKISSKLGSLKLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELT 711
Query: 726 NLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHEKLALQASLHYEDCKKE----- 779
N + S + + + ++ +LE + + +L + Y+ E
Sbjct: 712 NFVKICTSLHIQKVDLILQNTTVISEKNKLESDYMAASSQLRITEKSKYDGLLDESRQRL 771
Query: 780 VEHCRKHLSDAKRQAESIAFIT-P-ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ 837
++ C++ + A++ A T P E + F ++P T++E++A + + S+A+ LN
Sbjct: 772 LQKCKELMKRARQVCNLGAEQTVPQEYQTAFQDLPNTLDEIDALLTEERSRASCFTGLNP 831
Query: 838 NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNF 897
+++EY R+ +IE L+ + + K EL ++ I +KE+WL L+ LV +INE FS F
Sbjct: 832 TVVEEYTKREEEIEQLTEELKIKKVELDKYRENISQVKERWLNPLKELVEKINEKFSNFF 891
Query: 898 QEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSL 956
M AGEV L E+E D+DK+GI I+VKFR S QL L+ HHQSGGERSVST+LYL++L
Sbjct: 892 SSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMAL 951
Query: 957 QDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACS 1016
Q+L CPFRVVDEINQGMDPINER++F+ +V A + NT Q F +TPKLL +L YSE +
Sbjct: 952 QELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMT 1011
Query: 1017 ILNIMNGPWIEQPSKVWS 1034
+L + NGP + +P++ W+
Sbjct: 1012 VLFVYNGPHMLEPNR-WN 1028
>ZFIN|ZDB-GENE-061013-288 [details] [associations]
symbol:smc5 "structural maintenance of chromosomes
5" species:7955 "Danio rerio" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR027131 ZFIN:ZDB-GENE-061013-288 CTD:23137
PANTHER:PTHR19306:SF1 GeneTree:ENSGT00550000074963 EMBL:BX640501
IPI:IPI00997922 RefSeq:NP_001180470.1 UniGene:Dr.75528
Ensembl:ENSDART00000122170 GeneID:566749 KEGG:dre:566749
NextBio:20888355 Uniprot:E7F0W1
Length = 1073
Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
Identities = 304/1038 (29%), Positives = 524/1038 (50%)
Query: 15 EDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLL 74
E D+M G I+ I +HNF+T+DH PG +LN+++G NG+GKSS+VCAI L L G T +L
Sbjct: 34 EGDFMEGAIVRITMHNFLTYDHSEVFPGPKLNMIVGANGTGKSSIVCAICLGLAGKTSVL 93
Query: 75 GRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRN-KSEWFFNGKVVPKGEVL 133
GR +G YVKRG + G ++I L T+ +L + R+I N +S W N K + V
Sbjct: 94 GRGDKVGLYVKRGCQRGSVEIELYR-TRG-NLIVTREIQVENNQSTWMLNKKHASQKAVE 151
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E + +IQV NL QFLPQ++V EFAK+S +LLE TEK+VG P++ HC L +K
Sbjct: 152 EAVRELHIQVGNLCQFLPQEKVGEFAKMSNSELLEATEKSVGPPEMYEFHCELKTFRTKE 211
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+ +E K G+ L + + N + DVER + L++++ ++KK PW++Y+ + E
Sbjct: 212 RDLENVCKEKGNFLEKARQRNERNKLDVERYYMKKRHLDRIQMLEKKKPWVEYETARKEL 271
Query: 254 IXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFL 313
+ I + E ++ K++++ I E +++
Sbjct: 272 EGVKKERDEMKRKLRFLKEAQEPLLRKIRSVESELQPIEQQMKEMTNRIKEATQKCKQKH 331
Query: 314 EKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEK 373
++++ + I + Q + E +IE
Sbjct: 332 DQLELKNKEVDDIKQDMSLKQTEEADRQKRIGHTQLMIRDLQKELQNMGTIEDVTPQIEA 391
Query: 374 LGSQILELGVQANQKRLQKSEKEKILNQNKLT--LRQCSDRLKDMEDKNNKLLHALRNSG 431
+ +++ +Q + RL+ + +++++T + +RL+ ++D LR S
Sbjct: 392 INAELRN--IQEERARLESESLDLRRDKDEITGEFARLQNRLRSLDDMMKIKEEKLR-SR 448
Query: 432 AENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGD 491
+ + A WL+++R + P++L +NV + HA Y+E H+ ++F+ Q D
Sbjct: 449 FRDTYTALEWLRKNRDRYEGVVHEPMMLVINVRDARHAKYIETHISVNDLRAFVFQRQDD 508
Query: 492 RDFLAKNLKPFDVPILNYV--SNES-SRKEPFQISEEMRALGISARLDQVFDAPHAVKEV 548
D ++ +N + ES S++ P + E ++ G + L ++FDAP V
Sbjct: 509 NDKFMNEMRDTQRLRVNSIIAPTESCSKRPPSRPIETLKPYGFISYLREMFDAPEEVMSY 568
Query: 549 LISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASVEPVNQ 607
L Q+ ++ IG+++T ++V K L + +T E Y S Y +V +S +
Sbjct: 569 LCHQYRVNDVPIGTEKTKGMIESVIKDLQLRTIYTAEERYNVKKSAYSNNVVSSNSALRP 628
Query: 608 SRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIIN 667
+ L ++D ++ +Q ++ +L+ ++++ +
Sbjct: 629 PQFLTTTIDVEERRQLEEQLRAAERQKQSIDQRMAAIREQQANLDRRDNELRANKKKLSD 688
Query: 668 IVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNL 727
+ K K+R++E I+ ++ L +E +++IN + A + K I +
Sbjct: 689 L----KSKKRQLEQKISTKQDSLRQME-QNEINLVAIEEEANAKIAAVNNKKVTI-MGEY 742
Query: 728 LVEIVSCKWSYAEK-HMA--SIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR 784
L + S EK ++A S A+ +LE ++++ +A + Y K +
Sbjct: 743 LSHLQSKARLNMEKVYLALQSAGLSAEKTKLETDVRESSAELKRAEVDYTKLDKIKTNLL 802
Query: 785 KHLSDAKRQAESIAFITP-------ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ 837
++A I +TP EL F +P T++E++A + + ++A L+
Sbjct: 803 MTCKTLMKRASEICNMTPGETAVPEELHAAFSLLPETLDEIDAMLNEERTRAECFTGLSD 862
Query: 838 NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNF 897
++ EY R+++I++L + + EL + I KE+WL L+ LV IN FS F
Sbjct: 863 AVVDEYNRREQEIKNLEKELDDKTNELTTYRRNIAEAKERWLNPLKKLVELINVRFSDFF 922
Query: 898 QEMAVAGEVSL-DEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSL 956
Q M AGEV L E+E ++DK+GI I+V+FR++ ++ L+ HHQSGGERSV+T+LYL+SL
Sbjct: 923 QSMQCAGEVDLHSENEEEYDKYGIRIQVQFRRNTRMHELTPHHQSGGERSVTTMLYLMSL 982
Query: 957 QDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACS 1016
Q+L CPFRVVDEINQGMDP+NER++F +VRAA NT Q F +TPKLL +L+Y+E +
Sbjct: 983 QELNRCPFRVVDEINQGMDPVNERRVFDIVVRAACGVNTSQYFFITPKLLQNLQYAEQMT 1042
Query: 1017 ILNIMNGPWIEQPSKVWS 1034
IL + NGP + P+K W+
Sbjct: 1043 ILCVHNGPQMLPPNK-WN 1059
>UNIPROTKB|Q5ZJY5 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
[GO:0030915 "Smc5-Smc6 complex" evidence=ISS] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISS] [GO:0000722 "telomere maintenance via recombination"
evidence=ISS] [GO:0000781 "chromosome, telomeric region"
evidence=ISS] [GO:0016605 "PML body" evidence=ISS] [GO:0090398
"cellular senescence" evidence=ISS] [GO:0034184 "positive
regulation of maintenance of mitotic sister chromatid cohesion"
evidence=ISS] [GO:0045842 "positive regulation of mitotic
metaphase/anaphase transition" evidence=ISS] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0051301
GO:GO:0007067 GO:GO:0016605 GO:GO:0000724 GO:GO:0000781
GO:GO:0000722 GO:GO:0090398 GO:GO:0045842 eggNOG:COG1196
GO:GO:0030915 GO:GO:0034184 EMBL:AJ720299 EMBL:AJ851554
IPI:IPI00587679 RefSeq:NP_001034424.1 UniGene:Gga.2365
ProteinModelPortal:Q5ZJY5 STRING:Q5ZJY5 GeneID:431608
KEGG:gga:431608 CTD:23137 HOGENOM:HOG000154342 HOVERGEN:HBG093963
InParanoid:Q5ZJY5 OrthoDB:EOG4VMFDP NextBio:20830893
PANTHER:PTHR19306:SF1 Uniprot:Q5ZJY5
Length = 1065
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 309/1050 (29%), Positives = 522/1050 (49%)
Query: 14 GEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQL 73
G+ + G+I+ I + NF+T+D +PG LN++IG NG+GKSS+VCAI L L G
Sbjct: 23 GKPRSVEGSIVRIYMENFLTYDICEVRPGPNLNMIIGANGTGKSSIVCAICLGLAGKPSF 82
Query: 74 LGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEV 132
LGRA +G +VK+G G ++I L E++ I R+I N S W N K+ V
Sbjct: 83 LGRAEKVGLFVKQGCLKGLVEIELF--KVPENIIITREIQVVTNTSTWHINRKLTTLKTV 140
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
E NIQV+NL QFLPQD+V EFA++S ++LLE TEK++G P++ HC L K
Sbjct: 141 EEQVAALNIQVDNLCQFLPQDKVGEFARMSKIELLEATEKSIGPPEMYQFHCKLKSLKEK 200
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ +E K ++L ++K ++DV+R + L+ ++ +++K PW++Y+ + +
Sbjct: 201 ERELENVCKDKVNSLEKMKQRAERYKQDVDRYHECKRHLDLIDMLQRKRPWVEYETVRQQ 260
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQE-KAILDGDCKKLSSL------INEN 305
+ L E P+ K +E + + K+ + +++
Sbjct: 261 H----EDVKQRRDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQK 316
Query: 306 SKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYE 365
K + D LE D + IL A TV E
Sbjct: 317 CKEKQDALEMKDKQISEINQALRMKKDEEVDRKKK---ILSAYKMIDEWNNELNTVTDCE 373
Query: 366 PPHDKIEKLGSQILELGVQ-AN-QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN-- 421
+I+ + +++ + + AN + EKI NQ + R DR+ + NN
Sbjct: 374 NLQPQIDAVNNELKHVQEERANIDSDIGDVTTEKI-NQERENGR-IIDRIGQL---NNII 428
Query: 422 KLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIW 481
K+ + + A WL++++H+ KE P++L +NV + HA Y+E+H+
Sbjct: 429 KVKEETLQARFRDTHSALMWLRKNKHKFKKEVCEPMMLTINVKDNKHAKYVENHISTNDM 488
Query: 482 KSFITQDAGDRDFLAKNLKPFDVPILNYV-SNESSRKE--PFQISEEMRALGISARLDQV 538
K+F+ + D + L+ +N V + + S E P EE+ G + L ++
Sbjct: 489 KAFVFESQEDMELFLVELRDRQKLRVNAVCAPDKSCAETLPSTPIEELHRYGFFSYLREL 548
Query: 539 FDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGH 597
FDAP V L SQ+ + +G+++T + V K + +T E Y +S Y
Sbjct: 549 FDAPLPVMSYLCSQYHVHEVPVGTEKTRNMIERVIKETKLKQIYTAEEKYTIKVSTYT-K 607
Query: 598 VSASVEP-VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAA 656
+S S + ++ L VD + + Q+ +E
Sbjct: 608 LSFSTNMCLRPAQFLNYYVDTDERRQLENQQQNIKHILQSLDKQLMTLCERQKHLECRDN 667
Query: 657 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA----D 712
+L+++++E++ +R+++E+ I ++ + +E ++ IN L K QA
Sbjct: 668 ELRQQKKELLE----RGSRRKQLESKIAVKYDSIRQLE-QNPIN--LEKESQQAKVKIRA 720
Query: 713 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS-- 770
+NIQ+ K E+ + VS A+ + S DA+ LE K + L+AS
Sbjct: 721 INIQKAKLVTELMCHIKNYVSLNICKADLILQSTAVDAEKNRLEAEYKA-ASVELRASEQ 779
Query: 771 --LHYEDCKKEV-EHCRKHLSDAKRQAESIA--FITPELEKEFLEMPTTIEELEAAIQDN 825
L ++ K+ + E+C++ L A++ + E + F +P T+EE++A + +
Sbjct: 780 RFLELDERKRILTENCKELLKKARQMCNMNLDQHLPKEFQTAFQTLPDTLEEIDAFLNEE 839
Query: 826 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 885
S+ + L+ ++++E + +I+ L E +KKEL + I +KE+WL L+ +
Sbjct: 840 RSRVSCFTGLSASVVEECSKQMEEIQKLMESIEENKKELDDYKQSISKIKERWLNPLKKM 899
Query: 886 VAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGE 944
+ INE FS F M GEV L E+E ++DK+GI I+VKF L L+ +HQSGGE
Sbjct: 900 IESINEKFSGFFSSMESVGEVDLHVENEEEYDKYGIRIRVKFHNFTDLHELTPYHQSGGE 959
Query: 945 RSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPK 1004
+SVST+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ V+ A + +T Q FL+TPK
Sbjct: 960 KSVSTVLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMFVKTACKESTSQYFLITPK 1019
Query: 1005 LLPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
LL +L Y+E ++L + NGP++ + +K W+
Sbjct: 1020 LLQNLTYNEKMTLLFVYNGPFMLEANK-WN 1048
>UNIPROTKB|Q805A1 [details] [associations]
symbol:smc5 "Structural maintenance of chromosomes protein
5" species:8355 "Xenopus laevis" [GO:0000722 "telomere maintenance
via recombination" evidence=ISS] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=ISS] [GO:0000781
"chromosome, telomeric region" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0016605 "PML body" evidence=ISS] [GO:0030915
"Smc5-Smc6 complex" evidence=ISS] [GO:0034184 "positive regulation
of maintenance of mitotic sister chromatid cohesion" evidence=ISS]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=ISS] [GO:0090398 "cellular senescence"
evidence=ISS] InterPro:IPR027131 GO:GO:0005524 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 GO:GO:0003677 GO:GO:0016605
GO:GO:0000724 GO:GO:0030261 GO:GO:0000781 GO:GO:0000722
GO:GO:0090398 GO:GO:0009295 GO:GO:0045842 GO:GO:0030915
GO:GO:0034184 CTD:23137 HOVERGEN:HBG093963 PANTHER:PTHR19306:SF1
EMBL:AB103030 RefSeq:NP_001082472.1 UniGene:Xl.19399
ProteinModelPortal:Q805A1 PRIDE:Q805A1 GeneID:398492
KEGG:xla:398492 Xenbase:XB-GENE-953075 Uniprot:Q805A1
Length = 1065
Score = 1099 (391.9 bits), Expect = 2.6e-111, P = 2.6e-111
Identities = 294/1057 (27%), Positives = 523/1057 (49%)
Query: 8 RLKVSRGED--DYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIAL 65
+L + R E + + G+I+ I++ NF+T+D PG LN+++G NG+GKSS+VCAI L
Sbjct: 14 KLLLGRQEHHRNLVEGSIVRIKMENFLTYDQCEVFPGPYLNMIVGANGTGKSSIVCAICL 73
Query: 66 ALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNG 124
L G T +GRA +G YVKRG + G++++ L + ++ I R+I N+S W+ N
Sbjct: 74 GLAGKTAFIGRADKVGFYVKRGCQKGFVELELYKTSG--NVIIKREIQVANNQSVWYINH 131
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC--EFAKLSPVKLLEETEKA-VGDP---Q 178
K V E NIQV NL +P R EFA LS ++ ++ K VG P Q
Sbjct: 132 KSATLKTVEEQVPALNIQVGNLCP-IPATRTKFGEFANLSKIETSKKQLKNHVGTPRNVQ 190
Query: 179 LPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMK 238
+P++ + E + K + K + L +L N ++DVER Q+ +K++ ++
Sbjct: 191 VPLR---IEELHGEKKELAGACKSKAEFLEKLNQRNERYKQDVERYYQQKRHQDKIDMLE 247
Query: 239 KKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKL 298
+K PW++Y+ + +Y ++ I+ ++ + I+D K
Sbjct: 248 RKRPWVEYENVRQQYEDVKKSCGNFKDELKKLQGLQAPLNQKIQQIEKRQRIIDEKIKDK 307
Query: 299 SSLINE---NSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXX 355
+ I E N K++ D LE+ D + I K
Sbjct: 308 AIEIKETSKNCKQKQDELEQKDKQIEEVQQSLRVKRDAEQERQKKIGNIRKMIEDWEKEL 367
Query: 356 XXXQTVPAYEPPHDKIEKLGSQILE--LGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL 413
+P D I +I + +++ L + EK+ + + K + ++R+
Sbjct: 368 SAMTNQENIQPEMDSINTDFRRIQDDKANIESEMTDL-RMEKDNLEREKK----EKANRI 422
Query: 414 KDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLE 473
K ++ N L+ ++ + A WL++++ P++LE+N+ ++ HA Y+E
Sbjct: 423 KQFDNLMNLKEEKLKRMYSDT-YNAVVWLKENKDRFKNRVCQPMMLEINMKDQRHAKYVE 481
Query: 474 DHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPILNYV---SNESSRKEPFQISEEMRALG 530
+H+ K+F+ + D K ++ +N V + + P + +++ G
Sbjct: 482 NHIPMNDMKAFVFESQEDMQVFLKEVRDKQNLRVNTVCAPQEPYAEQRPKRPITDLKQYG 541
Query: 531 ISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRW 589
+ L ++FDAP+ V L Q+ + +G+++T + V K + +T E Y
Sbjct: 542 FFSYLRELFDAPYPVMNYLCYQYKVHEVPVGTEQTRSMIEKVIKETDLRQMYTAEEKYVT 601
Query: 590 SISRYGGHVSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQR 649
S Y + +S + ++ L +VD + QR
Sbjct: 602 KKSVYSQKLISSNVSLKGAQFLTVTVDAEERQQVVDQLKEIERKCSTIETSMEQLAERQR 661
Query: 650 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 709
++ +L+ ++ I+ + K K+R++E I+ + L +E +D++N L ++ Q
Sbjct: 662 SLDRRDNELRLRKKTILEM----KTKKRQLEQKISTKYDSLNRLE-QDNLN--LEEVQQQ 714
Query: 710 A----ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 765
A +LN+Q+ K ++ L+ E S E + S ++ ++E + K
Sbjct: 715 ANNRIKNLNVQKAKLVKDLLELMKECTSLSIEKVELALQSTAISSEKNKIESDYKSATSQ 774
Query: 766 ALQASLHYE--DCKKE--VEHCRKHLSDAKRQAESIA---FITPELEKEFLEMPTTIEEL 818
+ Y+ + KK +E+C+ L A RQA ++ + + + F +P +++E+
Sbjct: 775 LRELKNQYDGIEAKKLHLLENCKGLLRKA-RQACNLGPNQAVPQDFQTAFQSLPESLDEI 833
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
+A + + S+A+ L +++ +Y R ++I++++ + K EL+ + I +KEKW
Sbjct: 834 DAMLNEERSRASCFTGLTASVVDDYNKRTKEIQEVTEELNRKKLELEDYRKNISQVKEKW 893
Query: 879 LPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSA 937
L L+ L+ +IN+ FS F M GEV L E E ++DK+GI I+VKFR S QL L+
Sbjct: 894 LNPLKQLIEKINDQFSSFFSSMQCVGEVDLHTEKEEEYDKYGIRIRVKFRSSTQLHELTP 953
Query: 938 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQ 997
HHQSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ +V+ A + NT Q
Sbjct: 954 HHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMVVKTACKENTSQ 1013
Query: 998 CFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
F +TPKLL +L Y+E ++L + NGP++ +P+K W+
Sbjct: 1014 YFFITPKLLQNLTYAEKMTVLFVYNGPFMLEPTK-WN 1049
>UNIPROTKB|F1P1S9 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9031 "Gallus gallus" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
[GO:0051258 "protein polymerization" evidence=IEA]
InterPro:IPR018316 InterPro:IPR027131 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005525 GO:GO:0043234 GO:GO:0003924
GO:GO:0051258 Gene3D:3.30.1330.20 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:AADN02068109 EMBL:AADN02068110
EMBL:AADN02078239 EMBL:AADN02078240 EMBL:AADN02078241
EMBL:AADN02078242 EMBL:AADN02078243 EMBL:AADN02078244
EMBL:AADN02078245 EMBL:AADN02078246 EMBL:AADN02078247
EMBL:AADN02078248 IPI:IPI01017182 Ensembl:ENSGALT00000038206
ArrayExpress:F1P1S9 Uniprot:F1P1S9
Length = 1041
Score = 1081 (385.6 bits), Expect = 2.1e-109, P = 2.1e-109
Identities = 307/1047 (29%), Positives = 516/1047 (49%)
Query: 21 GNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
G+I+ I + NF+T+D +PG LN++IG NG+GKSS+VCAI L L G LGRA +
Sbjct: 3 GSIVRIYMENFLTYDICEVRPGPNLNMIIGANGTGKSSIVCAICLGLAGKPSFLGRAEKV 62
Query: 81 GAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEITKRF 139
G +VK+G G ++I L E++ I R+I N S W N K+ V E
Sbjct: 63 GLFVKQGCLKGLVEIELF--KVPENIIITREIQVVTNTSTWHINRKLTTLKTVEEQVAAL 120
Query: 140 NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECT 199
NIQV+NL QFLPQD+V EFA++S ++LLE TEK++G P++ HC L K + +E
Sbjct: 121 NIQVDNLCQFLPQDKVGEFARMSKIELLEATEKSIGPPEMYQFHCKLKSLKEKERELENV 180
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXX 259
K ++L ++K ++DV+R + L+ ++ +++K PW++Y+ + ++
Sbjct: 181 CKDKVNSLEKMKQRAERYKQDVDRYHECKRHLDLIDMLQRKRPWVEYETVRQQH----ED 236
Query: 260 XXXXXXXXXXXXNTLHEFSKPIEGKKQE-KAILDGDCKKLSSL------INENSKRRMDF 312
L E P+ K +E + + K+ + +++ K + D
Sbjct: 237 VKQRRDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQKCKEKQDA 296
Query: 313 LEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIE 372
LE D + IL A TV E +I+
Sbjct: 297 LEMKDKQISEINQALRMKKDEEVDRKKK---ILSAYKMIDEWNNELNTVTDCENLQPQID 353
Query: 373 KLGSQILELGVQ-AN-QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN--KLLHALR 428
+ +++ + + AN + EKI NQ + R DR+ + NN K+
Sbjct: 354 AVNNELKHVQEERANIDSDIGDVTTEKI-NQERENGR-IIDRIGQL---NNIIKVKEETL 408
Query: 429 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEV---NVSNRAHANYLEDHVGHYIWKSFI 485
+ + A WL++++H+ KE P++L NV + HA Y+E+H+ K+F+
Sbjct: 409 QARFRDTHSALMWLRKNKHKFKKEVCEPMMLTTSRSNVKDNKHAKYVENHISTNDMKAFV 468
Query: 486 TQDAGDRDFLAKNLKPFDVPILNYV-SNESSRKE--PFQISEEMRALGISARLDQVFDAP 542
+ D + L+ +N V + + S E P EE+ G + L ++FDAP
Sbjct: 469 FESQEDMELFLVELRDRQKLRVNAVCAPDKSCAETLPSTPIEELHRYGFFSYLRELFDAP 528
Query: 543 HAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSAS 601
V L SQ+ + +G+++T + V K + +T E Y +S Y +S S
Sbjct: 529 LPVMSYLCSQYHVHEVPVGTEKTRNMIERVIKETKLKQIYTAEEKYTIKVSTYT-KLSFS 587
Query: 602 VEP-VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQK 660
+ ++ L VD + + Q+ +E +L++
Sbjct: 588 TNMCLRPAQFLNYYVDTDERRQLENQQQNIKHILQSLDKQLMTLCERQKHLECRDNELRQ 647
Query: 661 EREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA----DLNIQ 716
+++E++ +R+++E+ I ++ + +E ++ IN L K QA +NIQ
Sbjct: 648 QKKELLE----RGSRRKQLESKIAVKYDSIRQLE-QNPIN--LEKESQQAKVKIRAINIQ 700
Query: 717 QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDC 776
+ K E+ + VS A+ + S DA+ LE K + L+AS Y +C
Sbjct: 701 KAKLVTELMCHIKNYVSLNICKADLILQSTAVDAEKNRLEAEYKA-ASVELRASEKY-NC 758
Query: 777 KKEVE----HCRKHL-SDAKRQAESIA--FITPELEK-EFLEMPTTIEELEAAIQDNISQ 828
+ +C + L ++ +A + +L+ F +P T+EE++A + + S+
Sbjct: 759 YGVISAKKAYCEQLLVAEITSMCFELANQMVRCDLQHVAFQTLPDTLEEIDAFLNEERSR 818
Query: 829 ANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQ 888
+ L+ ++++E + +I+ L E +KKEL + I +KE+WL L+ ++
Sbjct: 819 VSCFTGLSASVVEECSKQMEEIQKLMESIEENKKELDDYKQSISKIKERWLNPLKKMIES 878
Query: 889 INETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSV 947
INE FS F M GEV L E+E ++DK+GI I+VKF L L+ +HQSGGE+SV
Sbjct: 879 INEKFSGFFSSMESVGEVDLHVENEEEYDKYGIRIRVKFHNFTDLHELTPYHQSGGEKSV 938
Query: 948 STILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLP 1007
ST+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ V+ A + +T Q FL+TPKLL
Sbjct: 939 STVLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMFVKTACKESTSQYFLITPKLLQ 998
Query: 1008 DLEYSEACSILNIMNGPWIEQPSKVWS 1034
+L Y+E ++L + NGP++ + +K W+
Sbjct: 999 NLTYNEKMTLLFVYNGPFMLEANK-WN 1024
>UNIPROTKB|F1P1S0 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9031 "Gallus gallus" [GO:0000722 "telomere maintenance
via recombination" evidence=IEA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
[GO:0034184 "positive regulation of maintenance of mitotic sister
chromatid cohesion" evidence=IEA] [GO:0045842 "positive regulation
of mitotic metaphase/anaphase transition" evidence=IEA] [GO:0090398
"cellular senescence" evidence=IEA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 GO:GO:0016605 GO:GO:0000724
GO:GO:0000781 GO:GO:0000722 GO:GO:0090398 GO:GO:0045842
GO:GO:0030915 GO:GO:0034184 IPI:IPI00587679 PANTHER:PTHR19306:SF1
OMA:GMDPRNE GeneTree:ENSGT00550000074963 EMBL:AADN02068109
EMBL:AADN02068110 EMBL:AADN02078239 EMBL:AADN02078240
EMBL:AADN02078241 EMBL:AADN02078242 EMBL:AADN02078243
EMBL:AADN02078244 EMBL:AADN02078245 EMBL:AADN02078246
EMBL:AADN02078247 EMBL:AADN02078248 ProteinModelPortal:F1P1S0
Ensembl:ENSGALT00000038212 ArrayExpress:F1P1S0 Uniprot:F1P1S0
Length = 1066
Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
Identities = 309/1052 (29%), Positives = 516/1052 (49%)
Query: 14 GEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQL 73
G+ ++ G+I+ I + NF+T+D +PG LN++IG NG+GKSS+VCAI L L G
Sbjct: 21 GKPRFVEGSIVRIYMENFLTYDICEVRPGPNLNMIIGANGTGKSSIVCAICLGLAGKPSF 80
Query: 74 LGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEV 132
LGRA +G +VK+G G ++I L E++ I R+I N S W N K+ V
Sbjct: 81 LGRAEKVGLFVKQGCLKGLVEIELF--KVPENIIITREIQVVTNTSTWHINRKLTTLKTV 138
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
E NIQV+NL QFLPQD+V EFA++S ++LLE TEK++G P++ HC L K
Sbjct: 139 EEQVAALNIQVDNLCQFLPQDKVGEFARMSKIELLEATEKSIGPPEMYQFHCKLKSLKEK 198
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ +E K ++L ++K ++DV+R + L+ ++ +++K PW++Y+ + +
Sbjct: 199 ERELENVCKDKVNSLEKMKQRAERYKQDVDRYHECKRHLDLIDMLQRKRPWVEYETVRQQ 258
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQE-KAILDGDCKKLSSL------INEN 305
+ L E P+ K +E + + K+ + +++
Sbjct: 259 H----EDVKQRRDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQK 314
Query: 306 SKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYE 365
K + D LE D + IL A TV E
Sbjct: 315 CKEKQDALEMKDKQISEINQALRMKKDEEVDRKKK---ILSAYKMIDEWNNELNTVTDCE 371
Query: 366 PPHDKIEKLGSQILELGVQ-AN-QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN-- 421
+I+ + +++ + + AN + EKI NQ + R DR+ + NN
Sbjct: 372 NLQPQIDAVNNELKHVQEERANIDSDIGDVTTEKI-NQERENGR-IIDRIGQL---NNII 426
Query: 422 KLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEV---NVSNRAHANYLEDHVGH 478
K+ + + A WL++++H+ KE P++L NV + HA Y+E+H+
Sbjct: 427 KVKEETLQARFRDTHSALMWLRKNKHKFKKEVCEPMMLTTSRSNVKDNKHAKYVENHIST 486
Query: 479 YIWKSFITQDAGDRDFLAKNLKPFDVPILNYV-SNESSRKE--PFQISEEMRALGISARL 535
K+F+ + D + L+ +N V + + S E P EE+ G + L
Sbjct: 487 NDMKAFVFESQEDMELFLVELRDRQKLRVNAVCAPDKSCAETLPSTPIEELHRYGFFSYL 546
Query: 536 DQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRY 594
++FDAP V L SQ+ + +G+++T + V K + +T E Y +S Y
Sbjct: 547 RELFDAPLPVMSYLCSQYHVHEVPVGTEKTRNMIERVIKETKLKQIYTAEEKYTIKVSTY 606
Query: 595 GGHVSASVEP-VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIED 653
+S S + ++ L VD + + Q+ +E
Sbjct: 607 T-KLSFSTNMCLRPAQFLNYYVDTDERRQLENQQQNIKHILQSLDKQLMTLCERQKHLEC 665
Query: 654 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA-- 711
+L+++++E++ +R+++E+ I ++ + +E ++ IN L K QA
Sbjct: 666 RDNELRQQKKELLE----RGSRRKQLESKIAVKYDSIRQLE-QNPIN--LEKESQQAKVK 718
Query: 712 --DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDA-KIR-ELEFNLKQHEKLAL 767
+NIQ+ K E+ + VS A+ + S DA K R E E+ E A
Sbjct: 719 IRAINIQKAKLVTELMCHIKNYVSLNICKADLILQSTAVDAEKNRLEAEYKAASVELRAS 778
Query: 768 Q---ASLHYEDCK-KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
+ ASL E E+ L++ + + + L F +P T+EE++A +
Sbjct: 779 ERKIASLLSEQLLVAEITSMCFELANQMVRCDLQHGLLKRLAIAFQTLPDTLEEIDAFLN 838
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 883
+ S+ + L+ ++++E + +I+ L E +KKEL + I +KE+WL L+
Sbjct: 839 EERSRVSCFTGLSASVVEECSKQMEEIQKLMESIEENKKELDDYKQSISKIKERWLNPLK 898
Query: 884 NLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHHQSG 942
++ INE FS F M GEV L E+E ++DK+GI I+VKF L L+ +HQSG
Sbjct: 899 KMIESINEKFSGFFSSMESVGEVDLHVENEEEYDKYGIRIRVKFHNFTDLHELTPYHQSG 958
Query: 943 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLT 1002
GE+SVST+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ V+ A + +T Q FL+T
Sbjct: 959 GEKSVSTVLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMFVKTACKESTSQYFLIT 1018
Query: 1003 PKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
PKLL +L Y+E ++L + NGP++ + +K W+
Sbjct: 1019 PKLLQNLTYNEKMTLLFVYNGPFMLEANK-WN 1049
>UNIPROTKB|F1NK20 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9031 "Gallus gallus" [GO:0051258 "protein
polymerization" evidence=IEA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
InterPro:IPR018316 InterPro:IPR027131 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005525 GO:GO:0043234 GO:GO:0003924
GO:GO:0051258 Gene3D:3.30.1330.20 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:AADN02068109 EMBL:AADN02068110
EMBL:AADN02078239 EMBL:AADN02078240 EMBL:AADN02078241
EMBL:AADN02078242 EMBL:AADN02078243 EMBL:AADN02078244
EMBL:AADN02078245 EMBL:AADN02078246 EMBL:AADN02078247
EMBL:AADN02078248 IPI:IPI00820868 Ensembl:ENSGALT00000024394
ArrayExpress:F1NK20 Uniprot:F1NK20
Length = 1043
Score = 1074 (383.1 bits), Expect = 1.1e-108, P = 1.1e-108
Identities = 305/1047 (29%), Positives = 515/1047 (49%)
Query: 14 GEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQL 73
G+ ++ G+I+ I + NF+T+D +PG LN++IG NG+GKSS+VCAI L L G
Sbjct: 6 GKPRFVEGSIVRIYMENFLTYDICEVRPGPNLNMIIGANGTGKSSIVCAICLGLAGKPSF 65
Query: 74 LGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEV 132
LGRA +G +VK+G G ++I L E++ I R+I N S W N K+ V
Sbjct: 66 LGRAEKVGLFVKQGCLKGLVEIELF--KVPENIIITREIQVVTNTSTWHINRKLTTLKTV 123
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
E NIQV+NL QFLPQD+V EFA++S ++LLE TEK++G P++ HC L K
Sbjct: 124 EEQVAALNIQVDNLCQFLPQDKVGEFARMSKIELLEATEKSIGPPEMYQFHCKLKSLKEK 183
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ +E K ++L ++K ++DV+R + L+ ++ +++K PW++Y+ + +
Sbjct: 184 ERELENVCKDKVNSLEKMKQRAERYKQDVDRYHECKRHLDLIDMLQRKRPWVEYETVRQQ 243
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQE-KAILDGDCKKLSSL------INEN 305
+ L E P+ K +E + + K+ + +++
Sbjct: 244 H----EDVKQRRDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQK 299
Query: 306 SKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYE 365
K + D LE D + IL A TV E
Sbjct: 300 CKEKQDALEMKDKQISEINQALRMKKDEEVDRKKK---ILSAYKMIDEWNNELNTVTDCE 356
Query: 366 PPHDKIEKLGSQILELGVQ-AN-QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN-- 421
+I+ + +++ + + AN + EKI NQ + R DR+ + NN
Sbjct: 357 NLQPQIDAVNNELKHVQEERANIDSDIGDVTTEKI-NQERENGR-IIDRIGQL---NNII 411
Query: 422 KLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIW 481
K+ + + A WL++++H+ KE P++L + V + HA Y+E+H+
Sbjct: 412 KVKEETLQARFRDTHSALMWLRKNKHKFKKEVCEPMMLTI-VKDNKHAKYVENHISTNDM 470
Query: 482 KSFITQDAGDRDFLAKNLKPFDVPILNYV-SNESSRKE--PFQISEEMRALGISARLDQV 538
K+F+ + D + L+ +N V + + S E P EE+ G + L ++
Sbjct: 471 KAFVFESQEDMELFLIFLRDRQKLRVNAVCAPDKSCAETLPSTPIEELHRYGFFSYLREL 530
Query: 539 FDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGH 597
FDAP V L SQ+ + +G+++T + V K + +T E Y +S Y
Sbjct: 531 FDAPLPVMSYLCSQYHVHEVPVGTEKTRNMIERVIKETKLKQIYTAEEKYTIKVSTYT-K 589
Query: 598 VSASVEP-VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAA 656
+S S + ++ L VD + + Q+ +E
Sbjct: 590 LSFSTNMCLRPAQFLNYYVDTDERRQLENQQQNIKHILQSLDKQLMTLCERQKHLECRDN 649
Query: 657 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA----D 712
+L+++++E++ +R+++E+ I ++ + +E ++ IN L K QA
Sbjct: 650 ELRQQKKELLE----RGSRRKQLESKIAVKYDSIRQLE-QNPIN--LEKESQQAKVKIRA 702
Query: 713 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLH 772
+NIQ+ K E+ + VS A+ + S DA+ LE K + L+AS
Sbjct: 703 INIQKAKLVTELMCHIKNYVSLNICKADLILQSTAVDAEKNRLEAEYKA-ASVELRAS-E 760
Query: 773 YEDCKK----EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ 828
C++ E+ L++ + + E F +P T+EE++A + + S+
Sbjct: 761 KAYCEQLLVAEITSMCFELANQMVRCDLQHGKEKESMLAFQTLPDTLEEIDAFLNEERSR 820
Query: 829 ANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQ 888
+ L+ ++++E + +I+ L E +KKEL + I +KE+WL L+ ++
Sbjct: 821 VSCFTGLSASVVEECSKQMEEIQKLMESIEENKKELDDYKQSISKIKERWLNPLKKMIES 880
Query: 889 INETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSV 947
INE FS F M GEV L E+E ++DK+GI I+VKF L L+ +HQSGGE+SV
Sbjct: 881 INEKFSGFFSSMESVGEVDLHVENEEEYDKYGIRIRVKFHNFTDLHELTPYHQSGGEKSV 940
Query: 948 STILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLP 1007
ST+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ V+ A + +T Q FL+TPKLL
Sbjct: 941 STVLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMFVKTACKESTSQYFLITPKLLQ 1000
Query: 1008 DLEYSEACSILNIMNGPWIEQPSKVWS 1034
+L Y+E ++L + NGP++ + +K W+
Sbjct: 1001 NLTYNEKMTLLFVYNGPFMLEANK-WN 1026
>RGD|1307492 [details] [associations]
symbol:Smc5 "structural maintenance of chromosomes 5"
species:10116 "Rattus norvegicus" [GO:0000722 "telomere maintenance
via recombination" evidence=IEA;ISO] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA;ISO]
[GO:0000781 "chromosome, telomeric region" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0016605 "PML body"
evidence=IEA;ISO] [GO:0030915 "Smc5-Smc6 complex" evidence=IEA;ISO]
[GO:0034184 "positive regulation of maintenance of mitotic sister
chromatid cohesion" evidence=IEA;ISO] [GO:0045842 "positive
regulation of mitotic metaphase/anaphase transition"
evidence=IEA;ISO] [GO:0090398 "cellular senescence"
evidence=IEA;ISO] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISO] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 RGD:1307492 GO:GO:0005524
GO:GO:0007059 GO:GO:0003677 GO:GO:0030261 GO:GO:0009295
EMBL:CH473953 CTD:23137 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 IPI:IPI00951981 RefSeq:NP_001099827.1
UniGene:Rn.127947 Ensembl:ENSRNOT00000067796 GeneID:293967
KEGG:rno:293967 UCSC:RGD:1307492 NextBio:637334 Uniprot:D4A9F0
Length = 1064
Score = 608 (219.1 bits), Expect = 5.4e-106, Sum P(2) = 5.4e-106
Identities = 154/402 (38%), Positives = 232/402 (57%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
Q EQ+ I + A ++ ++ N+ + E+RK IN++K KL T L
Sbjct: 668 QLEQK-ISSKLASIRLMEQDTCNLEE-EERKASTKIKEINVQKAKLV---------TELT 716
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF-NLKQHE 763
LV L+IQ K + ++N V +S K +MAS ++ E +F L +
Sbjct: 717 GLVKICTSLHIQ--KVDLILQNTTV--ISEKNKLEADYMASSS-QLRVTEQQFIELDDNR 771
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT--PELEK--------EFLEMPT 813
+ LQ CK+ ++ R+ + + QA F T P + F ++P
Sbjct: 772 QRLLQK------CKELMKRARQVCNLSADQAVPQEFQTQVPTIPNGHSSSPPMAFQDLPN 825
Query: 814 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 873
T++E++A + + S+A+ LN ++++EY R+ +I+ L+ + + K EL + I
Sbjct: 826 TLDEIDALLTEERSRASCFTGLNPSVVEEYTKREIEIQQLTEELKGKKVELDEYRENISQ 885
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQL 932
+KE+WL L+ LV +INE FS F M AGEV L E+E D+DK+GI I+VKFR S QL
Sbjct: 886 VKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQL 945
Query: 933 EVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 992
L+ HHQSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +V A +
Sbjct: 946 HELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACK 1005
Query: 993 PNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
NT Q F +TPKLL +L YSE ++L + NGP + +P++ W+
Sbjct: 1006 ENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEPNR-WN 1046
Score = 518 (187.4 bits), Expect = 5.4e-106, Sum P(2) = 5.4e-106
Identities = 134/457 (29%), Positives = 218/457 (47%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G +GRA
Sbjct: 48 FVEGSIVRIAMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRA 107
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VKRG G ++I L + +L I R+ID +N+S WF N K V + V E
Sbjct: 108 DKVGFFVKRGCSKGLVEIELFRTSG--NLIITREIDVIKNQSFWFINKKPVTQKIVEEQV 165
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
NIQV NL QFLPQD+V EFAKLS ++LLE TEK++G P++ HC L K K +
Sbjct: 166 AALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQL 225
Query: 197 ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
E + K + L+++ N ++DVER +R L+ +E ++ K PW++Y+ + EY
Sbjct: 226 ETSCKEKTEYLDKMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEGV 285
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMDFL 313
++ IE ++++ L+ K+ ++ I E S K+R D +
Sbjct: 286 KLVRDRVKEEVRKLKEGQIPMTRRIEEIERQRRTLEVRIKEKATDIKEASQKCKQRQDLI 345
Query: 314 EKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEK 373
E+ D K + +P D I
Sbjct: 346 ERKDRHIKELQQALTVKQNEEQDRQKRISNTRKMIEDLQNELRTAENCENLQPQIDAITN 405
Query: 374 LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
++ E + + K ++++L + K R SD + ++ N+ LR +
Sbjct: 406 DLRRVQEEKALCEGEIIDKQREKEMLEKQK---RSVSDHITRFDNLMNQKEDKLRQRYRD 462
Query: 434 NIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHAN 470
++A WL+ +R + P++L V + + N
Sbjct: 463 T-YDAVLWLRNNRDRFKQRVCEPIMLTVRDNKKLRVN 498
Score = 130 (50.8 bits), Expect = 9.9e-55, Sum P(2) = 9.9e-55
Identities = 73/396 (18%), Positives = 165/396 (41%)
Query: 517 KEPFQISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-L 575
K P + E++ G + L ++FDAP V L Q+ + +G++ T ++ + V +
Sbjct: 510 KAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTERTRERIERVIQET 569
Query: 576 GILDFWTPENHYRWSISRYGGHVSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXX 635
+ +T E Y S Y V +S + ++ L +VD
Sbjct: 570 RLKQIYTAEEKYVLKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEEQLKEINRKLE 629
Query: 636 XXXXXXXXMQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK 695
++ R +E + +L+ +++E++ K K+R++E I+ + + +E+
Sbjct: 630 AVDSGLVALRDTNRHLELKDNELRLKKKELLE----RKTKKRQLEQKISSKLASIRLMEQ 685
Query: 696 ED-DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRE 754
+ ++ K + ++N+Q+ K E+ L+ S + + + ++ +
Sbjct: 686 DTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSLHIQKVDLILQNTTVISEKNK 745
Query: 755 LEFN-LKQHEKLAL--QASLHYEDCKKEV-EHCRKHLSDAKRQAESIAFITPELEKEFLE 810
LE + + +L + Q + +D ++ + + C K L RQ +++ + +EF
Sbjct: 746 LEADYMASSSQLRVTEQQFIELDDNRQRLLQKC-KELMKRARQVCNLS-ADQAVPQEFQT 803
Query: 811 MPTTIEELEAAIQDNISQ--ANSIFFLNQNILQEYEHRQRQIEDL--STKQEADKKELK- 865
TI ++ Q N++ ++ +L E R L S +E K+E++
Sbjct: 804 QVPTIPNGHSSSPPMAFQDLPNTLDEIDA-LLTEERSRASCFTGLNPSVVEEYTKREIEI 862
Query: 866 -RFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 900
+ E+ K + L R ++Q+ E + +E+
Sbjct: 863 QQLTEELKGKKVE-LDEYRENISQVKERWLNPLKEL 897
Score = 47 (21.6 bits), Expect = 5.3e-46, Sum P(2) = 5.3e-46
Identities = 32/141 (22%), Positives = 64/141 (45%)
Query: 805 EKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI--LQEYEHR-QRQIEDLSTKQEADK 861
+KE LE T +LE I ++ SI + Q+ L+E E + +I++++ ++
Sbjct: 656 KKELLERKTKKRQLEQKISSKLA---SIRLMEQDTCNLEEEERKASTKIKEINVQKAKLV 712
Query: 862 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEH---ESDFDKF 918
EL + +L + + + I+E MA + ++ + E E D ++
Sbjct: 713 TELTGLVKICTSLHIQKVDLILQNTTVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQ 772
Query: 919 GILIKVK--FRQSGQLEVLSA 937
+L K K +++ Q+ LSA
Sbjct: 773 RLLQKCKELMKRARQVCNLSA 793
Score = 40 (19.1 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 14/66 (21%), Positives = 34/66 (51%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKA----LNVEQEKDVERVRQRAELLEKVESMKKKL 241
L E + KL+ ++ + DT L+ L +++++ +ER ++ +L +K+ S +
Sbjct: 621 LKEINRKLEAVDSGLVALRDTNRHLELKDNELRLKKKELLERKTKKRQLEQKISSKLASI 680
Query: 242 PWLKYD 247
++ D
Sbjct: 681 RLMEQD 686
>UNIPROTKB|Q8IY18 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
[GO:0030915 "Smc5-Smc6 complex" evidence=IDA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IMP] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP] [GO:0000722 "telomere
maintenance via recombination" evidence=IMP] [GO:0000781
"chromosome, telomeric region" evidence=IDA] [GO:0016605 "PML body"
evidence=IDA] [GO:0090398 "cellular senescence" evidence=IMP]
[GO:0034184 "positive regulation of maintenance of mitotic sister
chromatid cohesion" evidence=IMP] [GO:0045842 "positive regulation
of mitotic metaphase/anaphase transition" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0051301
GO:GO:0007067 GO:GO:0016605 GO:GO:0000724 GO:GO:0000781
GO:GO:0000722 GO:GO:0090398 GO:GO:0045842 eggNOG:COG1196
GO:GO:0030915 EMBL:AL162390 GO:GO:0034184 HSSP:P60881 CTD:23137
HOGENOM:HOG000154342 HOVERGEN:HBG093963 OrthoDB:EOG4VMFDP
PANTHER:PTHR19306:SF1 EMBL:AJ310550 EMBL:AB011166 EMBL:BC017666
EMBL:BC038225 IPI:IPI00413265 RefSeq:NP_055925.2 UniGene:Hs.534189
UniGene:Hs.601181 ProteinModelPortal:Q8IY18 SMR:Q8IY18
IntAct:Q8IY18 STRING:Q8IY18 PhosphoSite:Q8IY18 DMDM:122070387
PaxDb:Q8IY18 PRIDE:Q8IY18 DNASU:23137 Ensembl:ENST00000361138
GeneID:23137 KEGG:hsa:23137 UCSC:uc004ahr.2 GeneCards:GC09P072873
H-InvDB:HIX0201342 HGNC:HGNC:20465 MIM:609386 neXtProt:NX_Q8IY18
PharmGKB:PA134993662 InParanoid:Q8IY18 OMA:GMDPRNE ChiTaRS:SMC5
GenomeRNAi:23137 NextBio:44403 Bgee:Q8IY18 CleanEx:HS_SMC5
Genevestigator:Q8IY18 Uniprot:Q8IY18
Length = 1101
Score = 613 (220.8 bits), Expect = 1.8e-102, Sum P(3) = 1.8e-102
Identities = 154/395 (38%), Positives = 221/395 (55%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
Q EQ+ I + L+ ++ N+ + E+RK IN++K KL + + ++
Sbjct: 706 QLEQK-ISSKLGSLKLMEQDTCNLEE-EERKASTKIKEINVQKAKL--VTELTNLIKICT 761
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVE---IVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 761
L Q DL +Q E KN L S + E+H IE D + L K+
Sbjct: 762 SLHIQKVDLILQNTTVISE-KNKLESDYMAASSQLRLTEQHF--IELDENRQRLLQKCKE 818
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEKEFLEMPTTIEELEA 820
K A Q C E + + Q +I L F ++P T++E++A
Sbjct: 819 LMKRARQV------CNLGAEQTLPQ--EYQTQVPTIPNGHNSSLPMVFQDLPNTLDEIDA 870
Query: 821 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 880
+ + S+A+ LN I+QEY R+ +IE L+ + + K EL ++ I +KE+WL
Sbjct: 871 LLTEERSRASCFTGLNPTIVQEYTKREEEIEQLTEELKGKKVELDQYRENISQVKERWLN 930
Query: 881 TLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHH 939
L+ LV +INE FS F M AGEV L E+E D+DK+GI I+VKFR S QL L+ HH
Sbjct: 931 PLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHH 990
Query: 940 QSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCF 999
QSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +V A + NT Q F
Sbjct: 991 QSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYF 1050
Query: 1000 LLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
+TPKLL +L YSE ++L + NGP + +P+ W+
Sbjct: 1051 FITPKLLQNLPYSEKMTVLFVYNGPHMLEPN-TWN 1084
Score = 484 (175.4 bits), Expect = 1.8e-102, Sum P(3) = 1.8e-102
Identities = 111/314 (35%), Positives = 170/314 (54%)
Query: 8 RLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALAL 67
+L + + ++ G+I+ I + NF+T+D PG LN+++G NG+GKSS+VCAI L L
Sbjct: 38 QLPLLQSSGPFVEGSIVRISMENFLTYDICEVSPGPHLNMIVGANGTGKSSIVCAICLGL 97
Query: 68 GGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKV 126
G +GRA +G +VKRG G ++I L +L I R+ID +N+S WF N K
Sbjct: 98 AGKPAFMGRADKVGFFVKRGCSRGMVEIELF--RASGNLVITREIDVAKNQSFWFINKKS 155
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
+ V E NIQV NL QFLPQD+V EFAKLS ++LLE TEK++G P++ HC L
Sbjct: 156 TTQKIVEEKVAALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHKYHCEL 215
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
K K +E + K + L ++ N ++DVER +R L+ +E ++ K PW++Y
Sbjct: 216 KNLREKEKQLETSCKEKTEYLQKMVQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEY 275
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS 306
+ + EY + IE + E+ L+ K+ ++ I E S
Sbjct: 276 ENVRQEYEEVKLVRDRVKEEVRKLKEGQIPVTCRIEEMENERHNLEARIKEKATDIKEAS 335
Query: 307 ---KRRMDFLEKVD 317
K++ D +E+ D
Sbjct: 336 QKCKQKQDVIERKD 349
Score = 228 (85.3 bits), Expect = 2.1e-60, Sum P(3) = 2.1e-60
Identities = 98/526 (18%), Positives = 228/526 (43%)
Query: 390 LQKSEKEKILNQNKLTLRQCSDRLKD-MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHE 448
+ K + + L + K ++ R + M K +KL R++ ++A WL+ +R +
Sbjct: 422 IDKRRERETLEKEKKSVDDHIVRFDNLMNQKEDKLRQRFRDT-----YDAVLWLRNNRDK 476
Query: 449 LNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPILN 508
+ P++L +N+ + +A Y+E+H+ ++F+ + D + K ++ +N
Sbjct: 477 FKQRVCEPIMLTINMKDNKNAKYIENHIPSNDLRAFVFESQEDMEVFLKEVRDNKKLRVN 536
Query: 509 YV-SNESSR--KEPFQISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKET 565
V + +SS K P + E++ G + L ++FDAP V L Q+ + +G+++T
Sbjct: 537 AVIAPKSSYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTEKT 596
Query: 566 DQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASVEPVNQSRLLLCSVDGNXXXXXX 624
++ + V + + +T E Y S Y V +S + ++ L +VD
Sbjct: 597 RERIERVIQETRLKQIYTAEEKYVVKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHLE 656
Query: 625 XXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN 684
++ + +E + +L+++++E++ K K+R++E I+
Sbjct: 657 EQLKEIHRKLQAVDSGLIALRETSKHLEHKDNELRQKKKELLE----RKTKKRQLEQKIS 712
Query: 685 LRKRKLESIEKED-DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHM 743
+ L+ +E++ ++ K + ++N+Q+ K E+ NL+ S + +
Sbjct: 713 SKLGSLKLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTNLIKICTSLHIQKVDLIL 772
Query: 744 ASIEFDAKIRELEFN-LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITP 802
+ ++ +LE + + +L L H+ + + + + + ++A + +
Sbjct: 773 QNTTVISEKNKLESDYMAASSQLRLTEQ-HFIELDENRQRLLQKCKELMKRARQVCNLGA 831
Query: 803 E--LEKEFLEMPTTIEELEAAIQDNISQ--ANSIFFLNQNILQEYEHRQRQIEDLSTK-- 856
E L +E+ TI + + Q N++ ++ +L E R L+
Sbjct: 832 EQTLPQEYQTQVPTIPNGHNSSLPMVFQDLPNTLDEIDA-LLTEERSRASCFTGLNPTIV 890
Query: 857 QEADKKE--LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 900
QE K+E +++ E+ K + L R ++Q+ E + +E+
Sbjct: 891 QEYTKREEEIEQLTEELKGKKVE-LDQYRENISQVKERWLNPLKEL 935
Score = 66 (28.3 bits), Expect = 3.8e-45, Sum P(3) = 3.8e-45
Identities = 50/217 (23%), Positives = 89/217 (41%)
Query: 719 KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRE-LEFNLKQ-HEKL-ALQASL-HYE 774
KY ++ +++S S ++ D + R LE LK+ H KL A+ + L
Sbjct: 618 KYVVKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEEQLKEIHRKLQAVDSGLIALR 677
Query: 775 DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFF 834
+ K +EH L K KE LE T +LE I S+ S+
Sbjct: 678 ETSKHLEHKDNELRQKK--------------KELLERKTKKRQLEQKIS---SKLGSLKL 720
Query: 835 LNQNI--LQEYEHR-QRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 891
+ Q+ L+E E + +I++++ ++ EL + +L + + + I+E
Sbjct: 721 MEQDTCNLEEEERKASTKIKEINVQKAKLVTELTNLIKICTSLHIQKVDLILQNTTVISE 780
Query: 892 TFSRNFQEMAVAGEVSLDE-H--ESDFDKFGILIKVK 925
MA + ++ L E H E D ++ +L K K
Sbjct: 781 KNKLESDYMAASSQLRLTEQHFIELDENRQRLLQKCK 817
Score = 63 (27.2 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 102 KEEHLTIMRKIDTRNKS--EWFFNGKV-VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEF 158
K E+L M + + R K E F+ K + E+LE KR ++ N+ Q E
Sbjct: 232 KTEYLQKMVQRNERYKQDVERFYERKRHLDLIEMLE-AKRPWVEYENVRQEY------EE 284
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
KL ++ EE K + + Q+PV C + E ++ +E +K + + +Q+
Sbjct: 285 VKLVRDRVKEEVRK-LKEGQIPVT-CRIEEMENERHNLEARIKEKATDIKEASQ-KCKQK 341
Query: 219 KDV-ERVRQRAELLEKVESMKK 239
+DV ER + E L++ +K+
Sbjct: 342 QDVIERKDKHIEELQQALIVKQ 363
Score = 55 (24.4 bits), Expect = 3.8e-45, Sum P(3) = 3.8e-45
Identities = 21/80 (26%), Positives = 40/80 (50%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE----DDI 699
+Q E + E+ LQ + + I N ++ + ++ E I ++R+ E++EKE DD
Sbjct: 383 LQNELKTTEN-CENLQPQIDAITNDLRRIQDEKALCEGEIIDKRRERETLEKEKKSVDDH 441
Query: 700 NTALAKLVDQAADLNIQQFK 719
L++Q D Q+F+
Sbjct: 442 IVRFDNLMNQKEDKLRQRFR 461
Score = 40 (19.1 bits), Expect = 6.9e-56, Sum P(3) = 6.9e-56
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 157 EFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE 216
E KL ++ EE K + + Q+PV C + E ++ +E +K KA +++
Sbjct: 283 EEVKLVRDRVKEEVRK-LKEGQIPVT-CRIEEMENERHNLEARIKE--------KATDIK 332
Query: 217 QEKDVERVRQRAELLEKVESMKKK 240
+ ++ +Q+ +++E+ K K
Sbjct: 333 EAS--QKCKQKQDVIER----KDK 350
Score = 39 (18.8 bits), Expect = 1.8e-102, Sum P(3) = 1.8e-102
Identities = 11/53 (20%), Positives = 24/53 (45%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN 421
D IE+ I EL K+ ++ ++++ + + + + LK E+ N
Sbjct: 343 DVIERKDKHIEELQQALIVKQNEELDRQRRIGNTRKMIEDLQNELKTTENCEN 395
Score = 38 (18.4 bits), Expect = 2.2e-43, Sum P(3) = 2.2e-43
Identities = 7/45 (15%), Positives = 22/45 (48%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE 696
+D + K EE+ + +++ + + + I ++ +E ++ E
Sbjct: 342 QDVIERKDKHIEELQQALIVKQNEELDRQRRIGNTRKMIEDLQNE 386
>POMBASE|SPAC14C4.02c [details] [associations]
symbol:smc5 "Smc5-6 complex SMC subunit Smc5"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
[GO:0000935 "barrier septum" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0030915
"Smc5-Smc6 complex" evidence=IDA] [GO:0032153 "cell division site"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0048478 "replication fork protection" evidence=IC]
InterPro:IPR027131 InterPro:IPR003395 PomBase:SPAC14C4.02c
Pfam:PF02463 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0032153
GO:GO:0044732 GO:GO:0000724 GO:GO:0048478 GO:GO:0000935
eggNOG:COG1196 GO:GO:0030915 PANTHER:PTHR19306:SF1 EMBL:AJ277543
PIR:T37687 RefSeq:NP_594907.2 IntAct:O13710 STRING:O13710
EnsemblFungi:SPAC14C4.02c.1 GeneID:2541587 OrthoDB:EOG48KVKB
NextBio:20802681 Uniprot:O13710
Length = 1076
Score = 468 (169.8 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 126/386 (32%), Positives = 210/386 (54%)
Query: 653 DEAAKLQKEREEIINIVQI-EKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
D + L+KER+E ++ I E ++ +E H L R+ E + ++ A +++
Sbjct: 680 DILSTLRKERDE--KLIPIHEWQQLQERIEHQTLLLRQREKVPEQ------FAAEIEKNE 731
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCK-WSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS 770
D+ + F+ A+ L V+ S K + EK + S + E ++ L++HE A Q +
Sbjct: 732 DIRKENFE-ALMNSVLKVKENSIKATNNFEKMLGS---RLNVIEAKYKLEKHEMDANQVN 787
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESI-AFITPELEKEFLEMPTTIEELE------AAIQ 823
+ + ++ L+ A+ A S+ + L+ + + T I EL + +
Sbjct: 788 ARLTEVQDRLKDITDKLASAREDAMSLYGSVVDSLQTQSSDRQTAITELNEEFATSSEVD 847
Query: 824 DNIS-QANSIFFLNQN--ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 880
+ IS + + F+N N ++++Y+ R+++IE+L +K + ++ E++++KE W+
Sbjct: 848 NKISIEETKLKFMNVNSYVMEQYDARKKEIEELESKMSDFDQSVEELQDEMNSIKEDWVS 907
Query: 881 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQ 940
L V I++ FS+ M AGEV L + + D+DK+ I I V+FR+ L+ L+ Q
Sbjct: 908 KLEENVQCISDRFSKGMSGMGYAGEVRLGKSD-DYDKWYIDILVQFREEEGLQKLTGQRQ 966
Query: 941 SGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFL 1000
SGGERSVSTI+YL+SLQ L PFR+VDEINQGMDP NER + + +V + Q FL
Sbjct: 967 SGGERSVSTIMYLLSLQGLAIAPFRIVDEINQGMDPRNERVVHRHIVNSVCDNAVSQYFL 1026
Query: 1001 LTPKLLPDLEYSEACSILNIMNGPWI 1026
+TPKLLPDL Y +L I NG W+
Sbjct: 1027 VTPKLLPDLTYHRNLKVLCICNGAWL 1052
Score = 423 (154.0 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 149/581 (25%), Positives = 251/581 (43%)
Query: 7 KRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALA 66
KR K + DY G+I+ I+L NF+T+D+ PG LNL+IGPNG+GKS++V AI +
Sbjct: 8 KRRKSNPLYSDYALGSIVRIKLVNFVTYDYCELFPGPYLNLIIGPNGTGKSTIVSAICIG 67
Query: 67 LGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKV 126
LG +LLGRA ++K G+ + I+I ++ +E +TI R+I S + N +
Sbjct: 68 LGWPPKLLGRAKEAREFIKYGKNTATIEIEMKY-RDDETVTITRQISQDKSSSFSINREA 126
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
+ + FN+Q+NNL FLPQDRV EFA+L P L ETE+A+ L H L
Sbjct: 127 CATSSITSLMDTFNVQLNNLCHFLPQDRVAEFAQLDPYSRLMETERAIDHEGLLPAHEKL 186
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
++ + + I + TLN LK EK+V ++R EK++S + L K
Sbjct: 187 IDLRKREREILQNKNQGQSTLNSLKDRQQALEKEVNIFKER----EKIKSYIEMLGLAKM 242
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS 306
+ E L E +PI K +E L D K N+ S
Sbjct: 243 LVIYREKTNVFNQLRADKKKLKKDLKDLVEEFQPILDKGEE---LRSDLKLKDDTFNDYS 299
Query: 307 KRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILK-ARXXXXXXXXXXQTVPAYE 365
M+ L + + +L+ A +++ +
Sbjct: 300 SASME-LNTSNLRARASFSNFMENEKKLYEKVNTNRTLLRNANLTLNEAQQSVKSLTERQ 358
Query: 366 PPHDKIEKLGSQILELGVQ-ANQKRLQKSEKEKILNQNKL-TLRQC-SDRLKDME----- 417
P G Q L+ +Q N ++LQ E EK+ + ++L ++R + +L D++
Sbjct: 359 GPRPSDN--GVQDLQEKMQEVNAEKLQH-ENEKLESSHELGSIRTLKAQKLIDLDNIKRE 415
Query: 418 -----DKNNKLLHALRNS-GAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANY 471
D + L + ++ G E+ ++ Y L+++ AYGP+ + + + A
Sbjct: 416 LSYYNDATKRKLDFMSSAPGWEDAYQTYQLLKEYESAFEAPAYGPIYMNLKCKEKGFAAL 475
Query: 472 LEDHVGHYIWKSFITQDAGD----RDFLAKNLKPFDVPILNYVSNESSRK-EPFQ---IS 523
+E +++FI + D D + K P + S+E +K E F+
Sbjct: 476 IEGFFRTDTFRTFIMSNYNDYLKLMDLITSKTKY--TPTIREFSSERKKKIEDFEPPCSR 533
Query: 524 EEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKE 564
E++++ G + + P V L + I +E
Sbjct: 534 EKLQSFGFDGYVIDFLEGPEVVLVALCHMLKIHQIPIAKRE 574
Score = 51 (23.0 bits), Expect = 8.3e-41, Sum P(2) = 8.3e-41
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 387 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQ-QH 445
Q Q S+ E + N+ + L++ + + + + N +L LR E + + W Q Q
Sbjct: 646 QLNAQLSQLENLQNEER-KLQEKVNEHESLLSRTNDILSTLRKERDEKLIPIHEWQQLQE 704
Query: 446 RHE 448
R E
Sbjct: 705 RIE 707
Score = 48 (22.0 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 173 AVGDPQLPVQHCALVEKSSKL-KTIECT-VKRNGDTLN----QLKALNVEQEKDVERVRQ 226
A GD ++ + L +S + +E VKR + LN QL+ L E+ K E+V +
Sbjct: 611 AYGDREITRRTDPLPSRSIYFSENVEMDLVKRKEEQLNAQLSQLENLQNEERKLQEKVNE 670
Query: 227 RAELLEKVESMKKKL 241
LL + + L
Sbjct: 671 HESLLSRTNDILSTL 685
Score = 39 (18.8 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 13/66 (19%), Positives = 31/66 (46%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
IE+ K ++ K++ E+E+ ++ + +E E +D++N+ V +
Sbjct: 852 IEETKLKFMNVNSYVMEQYDARKKEIEELESKMSDFDQSVE--ELQDEMNSIKEDWVSKL 909
Query: 711 ADLNIQ 716
+ N+Q
Sbjct: 910 EE-NVQ 914
>ASPGD|ASPL0000076401 [details] [associations]
symbol:AN8742 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030915 "Smc5-Smc6
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044732 "mitotic spindle pole body" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0071139 "resolution
of recombination intermediates" evidence=IEA] [GO:0000725
"recombinational repair" evidence=IEA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 EMBL:BN001303 PANTHER:PTHR19306:SF1
OMA:GMDPRNE EnsemblFungi:CADANIAT00006326 Uniprot:C8VA01
Length = 1185
Score = 425 (154.7 bits), Expect = 8.4e-71, Sum P(2) = 8.4e-71
Identities = 126/371 (33%), Positives = 194/371 (52%)
Query: 672 EKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIE--IKNLLV 729
E +K + + +R ++ K+D ++ A+ V Q A+ ++ + E IK L
Sbjct: 786 EAKKEAQDASIAKIRASIIKIRHKQDKLSVEKAEAVLQYANA-VESLRELHEELIKLSLW 844
Query: 730 EIVSCK-WSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLS 788
+I S W + + + E++ ++ +KQ + Q +L +C++ + +K LS
Sbjct: 845 KIESFSDWEVLK--LRNSEYEERLNAKRDEVKQLSEQVKQKAL---ECRRAEQEAKK-LS 898
Query: 789 DAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQR 848
R+ + + E+ L T E LE I ++ N++QEYE R R
Sbjct: 899 VKAREQPDLMEVAQEVSSNNL----TPEALEGEIDSEQARLELTHGGPSNVVQEYEERAR 954
Query: 849 QIEDLSTK-QEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVS 907
QI L K E D+K LK+F I ++ KW P L +V +++ FS +F + AG+VS
Sbjct: 955 QINKLRKKLTEFDEK-LKQFNDAIAEVRGKWEPKLDAIVKSVSDAFSDSFARIGCAGQVS 1013
Query: 908 LDE--HE---------SDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSL 956
LD+ E +DFD + I + VKFR+ L +L +H QSGGER+VSTI YL++L
Sbjct: 1014 LDKPGDEPGPDGQPSGNDFDLWSIQVHVKFREHENLSLLDSHRQSGGERAVSTIFYLMAL 1073
Query: 957 QDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP----QCFLLTPKLLPDLEYS 1012
Q L+ PFRVVDEINQGMDP NER + +LV A P++ Q FL+TPKLL L Y
Sbjct: 1074 QSLSASPFRVVDEINQGMDPRNERMVHGRLVEIACAPSSDGGGGQYFLITPKLLSGLVYK 1133
Query: 1013 EACSILNIMNG 1023
+L I++G
Sbjct: 1134 PGMRVLCIVSG 1144
Score = 383 (139.9 bits), Expect = 8.4e-71, Sum P(2) = 8.4e-71
Identities = 91/236 (38%), Positives = 133/236 (56%)
Query: 13 RGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQ 72
RG++ + PG I+ I++ +F+T+ PG +LN+VIGPNG+GKS+LVCAI L LG
Sbjct: 109 RGQEGFKPGAIVRIKVKDFVTYTAAEFFPGPKLNMVIGPNGTGKSTLVCAICLGLGWGPV 168
Query: 73 LLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTR--NKSEWFFNGKVVPKG 130
LGRA IG +VK G I+I L K ++ +I R NKS + NGK
Sbjct: 169 HLGRAKDIGEFVKHGCREATIEIELARGPKHSRNPVVTRIIKREGNKSSFMLNGK----- 223
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
+ F IQV+NL QFLPQD+V EFA L+PV+LL T++A ++ H L
Sbjct: 224 ------QSFAIQVDNLCQFLPQDKVSEFAALTPVELLHSTQRAAAGAEMVELHENLKRLR 277
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
++ K ++ + + D L L+ Q D ERVRQRA++ ++E ++ P + Y
Sbjct: 278 AEQKKLQSNNQSDKDLLANLENRQEMQRADFERVRQRAQIARRIELLQTVRPLVLY 333
Score = 163 (62.4 bits), Expect = 4.9e-43, Sum P(2) = 4.9e-43
Identities = 100/579 (17%), Positives = 230/579 (39%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
+++I +I E+ +A + +K + + N+ L+Q +L+ ++ + + L
Sbjct: 458 NEQIRDKRREIREIENRAKEINERKRQLHEKFNETGDRLKQAEHQLRSLDSRAGQQEKKL 517
Query: 428 RNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQ 487
++ +++ ++AY WL ++ + +E +GP ++ ++ + +A+ +E + + SF Q
Sbjct: 518 QDVSSDS-YKAYRWLLNNQDKFEQEVFGPPIVTCSIKDSKYADQVESLLQKTDFTSFTVQ 576
Query: 488 DAGD----RDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPH 543
+ D + +L L+ D+ I + + + E+R LG D P
Sbjct: 577 NRRDFRTLQRYLINELRLHDISIRTSSTPLENLRSSLP-DHELRDLGFHGWARDFLDGPE 635
Query: 544 AVKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISR---YG-GHVS 599
V +L+S+ L + + ++ + + G + W ++I+R YG G +S
Sbjct: 636 PVVAMLVSEKLLHQTPVSLRDISDQTFATLEQGSISSWVAGKQ-NYTINRRREYGPGAIS 694
Query: 600 ASVEPVNQSRLLLCS-VDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKL 658
V V +R+ VD + + ++ +
Sbjct: 695 TRVRQVRPARVWTSQPVDASAKAELQRRIQELRSEVEEIKERIESDRATMAQLKRDNDTA 754
Query: 659 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIE-KEDDINTALAKLVDQAADLNIQQ 717
ER+++ + +K ++ H K+ E K++ + ++AK+ + +Q
Sbjct: 755 HAERDKL----ERDKNDKQTAYTHFRAIPEKIRHQEAKKEAQDASIAKIRASIIKIRHKQ 810
Query: 718 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 777
K ++E +++ + S E H I+ + ++E + E L L+ S + E
Sbjct: 811 DKLSVEKAEAVLQYANAVESLRELHEELIKLS--LWKIE-SFSDWEVLKLRNSEYEERLN 867
Query: 778 KEVEHCRKHLSDAKRQAESIAFITPELEK---EFLEMPTTIEELEAAIQDNIS-QANSIF 833
+ + ++ K++A E +K + E P +E + +N++ +A
Sbjct: 868 AKRDEVKQLSEQVKQKALECRRAEQEAKKLSVKAREQPDLMEVAQEVSSNNLTPEALEGE 927
Query: 834 FLNQNILQEYEHR--QRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 891
++ E H +++ + K L++ L E D EK L + +A++
Sbjct: 928 IDSEQARLELTHGGPSNVVQEYEERARQINK-LRKKLTEFD---EK-LKQFNDAIAEVRG 982
Query: 892 TFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSG 930
+ A+ VS D F + G +V + G
Sbjct: 983 KWEPKLD--AIVKSVS-DAFSDSFARIGCAGQVSLDKPG 1018
Score = 50 (22.7 bits), Expect = 8.9e-36, Sum P(2) = 8.9e-36
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 165 KLLEETEKAVGDPQLPVQHCAL--VEKSSKLKT-----IECTVKRNGDTLNQLKALNVEQ 217
K L+E E+ V +L V L V +SS+ K +E VK L + + +
Sbjct: 341 KALKE-ERNVSQRELEVLEAQLKPVMRSSEQKKEYCMQLEAVVKHKQRALERADRMATDL 399
Query: 218 EKDVERVRQRAELLE-KVESMKK 239
+ VE+ Q + L+ ++E+ KK
Sbjct: 400 NRKVEQYEQNMKELDAEIEAEKK 422
Score = 37 (18.1 bits), Expect = 8.1e-30, Sum P(2) = 8.1e-30
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 402 NKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWL 442
N L +K E +N LL + R SG E +L
Sbjct: 1030 NDFDLWSIQVHVKFREHENLSLLDSHRQSGGERAVSTIFYL 1070
>FB|FBgn0052438 [details] [associations]
symbol:Smc5 "Smc5" species:7227 "Drosophila melanogaster"
[GO:0000796 "condensin complex" evidence=NAS] [GO:0007067 "mitosis"
evidence=NAS] [GO:0000070 "mitotic sister chromatid segregation"
evidence=NAS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IEA] [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
InterPro:IPR027131 InterPro:IPR003395 Pfam:PF02463 HSSP:P58301
PANTHER:PTHR19306:SF1 ChiTaRS:SMC5 FlyBase:FBgn0052438
EMBL:BT009967 ProteinModelPortal:Q7YU66 IntAct:Q7YU66 STRING:Q7YU66
PRIDE:Q7YU66 InParanoid:Q7YU66 ArrayExpress:Q7YU66 Bgee:Q7YU66
Uniprot:Q7YU66
Length = 1034
Score = 454 (164.9 bits), Expect = 4.7e-66, Sum P(2) = 4.7e-66
Identities = 149/604 (24%), Positives = 265/604 (43%)
Query: 434 NIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRD 493
N+ A WL Q++ Y P++LE+ V N A +LE+ V +F +D GD
Sbjct: 428 NLVVAMNWLAQNKQRYKLNVYDPMILELTVQNHEDAKFLENVVAQRDLFAFACEDKGDMS 487
Query: 494 FLAKNL---KPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVLI 550
L L + V ++ ++ P +++R+ G + L + P + L
Sbjct: 488 DLINELCVKQKLGVNVIYCAPSDRLVYSPKTPIDDLRSFGFRSYLVDLVTGPIPLINKLC 547
Query: 551 SQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVEPVNQSRL 610
+ + + + IG++ ++ K I ++ + + SRY + +
Sbjct: 548 ASYSIHNIPIGTEAVGNYTSSIPK-AIRVYFGGSKKFVVTASRYRSDTILTESSIRAKNQ 606
Query: 611 LLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIINIVQ 670
L+ +VD E ++ A Q++R ++ +
Sbjct: 607 LI-TVDSQQLALVMKQCSEAVKESDSIKNAITQTDNEFERLQAVAKDEQEKRRKLDQKIA 665
Query: 671 IEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA-ADLNIQQFKYAIEIKNLLV 729
+ E+E L+K KLE++ D ++ + DL + F E+ + L
Sbjct: 666 HFNSLKTEIET---LQK-KLEALRNSDSLDCLETNFCNSLHKDLK-KIFDADAELCSCLK 720
Query: 730 EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSD 789
I EK+MA + + + E ++ ++ Q+ D ++ ++ +SD
Sbjct: 721 AIDRL---IIEKNMAQTKVSIYMLQHETQIEALKESEEQSKAATRDFQQLLQCLENQISD 777
Query: 790 AKRQAESIAFIT----PE-----LEKEFLEMPTT-IEELEAAIQDNISQANSIFFLNQNI 839
++ +I + P +KEF E+ + EL AI D ++ + +N
Sbjct: 778 VNKRKSAIQGLCHGEIPTSSKFPFKKEFRELENIDLPELREAIHDFQARLECMKSVNSEA 837
Query: 840 LQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQE 899
+ Y+ Q +++ L + + K + + L +KW P L +LV I+ FS +
Sbjct: 838 ISSYQGLQNEVKQLEEGIQESVNQAKSIESGMSNLYDKWEPKLNSLVETISTKFSEFMES 897
Query: 900 MAVAGEVSLDEHES-DFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQD 958
+ GEV L + + DFD +GI I V+FR+ QL+ L QSGGER+VS +Y +SLQ
Sbjct: 898 IEYVGEVVLSKTDKYDFDSYGIQIMVQFRRGLQLQPLDKFIQSGGERAVSIAIYSLSLQH 957
Query: 959 LTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSIL 1018
+T+ PFR VDEINQGMD NER +F L++ A++ + Q +TPKLL DL Y+E +
Sbjct: 958 VTHVPFRCVDEINQGMDATNERHIFDLLLKEATKHGSAQYLFVTPKLLRDLNYNEHLCVS 1017
Query: 1019 NIMN 1022
+ N
Sbjct: 1018 IVHN 1021
Score = 305 (112.4 bits), Expect = 4.7e-66, Sum P(2) = 4.7e-66
Identities = 88/305 (28%), Positives = 148/305 (48%)
Query: 19 MPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRAT 78
+ G I + +F+++ + P LN++ GPNGSGKS++V AI L LGG+ LL R+
Sbjct: 12 LAGRIHSVYCKDFVSYSEITFHPKHYLNVLTGPNGSGKSTIVSAIILGLGGEPILLDRSA 71
Query: 79 SIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
S+ Y++ + S I + + G T T R I++ S + N K K L
Sbjct: 72 SVADYIQSNKTSATIIVRVYGRTPNTTETFRRIINSNGLSTFSVNDKDTSKKNFLAAVSS 131
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIEC 198
FNIQV+NL QFLPQDRV +F+K++P +LL T +V D L +L + ++ +
Sbjct: 132 FNIQVSNLCQFLPQDRVQDFSKMNPQELLLNTMSSVCDEDLINSFNSLKQMRTEQANVHA 191
Query: 199 T-VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY---DMKKAEYI 254
K D + + K L + V + ++R E+ +K++ K W++ + K AE
Sbjct: 192 NREKEKSDLVKKQKRLE-HLQMTVSQYKEREEVKQKLQVYSAKKLWVETQAGEAKAAEMK 250
Query: 255 XXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQE--KAILDGDCKKLSSLINENSK--RRM 310
+ L + IE +K+ KA+L+ + L + + E + +M
Sbjct: 251 TQVKNAKTQSDKLKNQHDKLLPSQEQIEKEKESLRKALLE-KTRLLENAVAEKAAIDGKM 309
Query: 311 DFLEK 315
D L++
Sbjct: 310 DSLKQ 314
Score = 52 (23.4 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 60/310 (19%), Positives = 118/310 (38%)
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEET---EKAVGDPQLPVQHC 184
K ++++ KR ++Q+ ++ V + ++ S KL ET E + + V++
Sbjct: 197 KSDLVKKQKRLEHLQMTVSQYKEREEVKQKLQVYSAKKLWVETQAGEAKAAEMKTQVKNA 256
Query: 185 A-----LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVER-VRQRAELLEKVESMK 238
L + KL + +++ ++L KAL +E+ + +E V ++A + K++S+K
Sbjct: 257 KTQSDKLKNQHDKLLPSQEQIEKEKESLR--KAL-LEKTRLLENAVAEKAAIDGKMDSLK 313
Query: 239 KKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEF-----SKPIEGKKQEKAILDG 293
+ + KY++++ N ++E S+P+ + E+A
Sbjct: 314 QGIYQKKYELEQ-NIKKSRRTATECDNLNQLVENKIYELETLNKSRPLIVSELERA--KE 370
Query: 294 DCKKLSSLINENSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXX 353
C E RR +K++ YK ++A+
Sbjct: 371 SCAAARGKAMEQYSRRRQLEQKLNDEMIPEITAYKLKIERLRNVKMQKIDEIRAKNPNLV 430
Query: 354 XXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL 413
A K+ ILEL VQ ++ E ++ Q L C D+
Sbjct: 431 VAMNWL---AQNKQRYKLNVYDPMILELTVQNHE---DAKFLENVVAQRDLFAFACEDK- 483
Query: 414 KDMEDKNNKL 423
DM D N+L
Sbjct: 484 GDMSDLINEL 493
Score = 41 (19.5 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 401 QNKLTLRQCSDRLKDMEDKNNKL 423
Q L ++QCS+ +K+ + N +
Sbjct: 614 QLALVMKQCSEAVKESDSIKNAI 636
Score = 38 (18.4 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 297 KLSSLINENSKRRMDFLEKVD 317
KL+SL+ S + +F+E ++
Sbjct: 879 KLNSLVETISTKFSEFMESIE 899
>UNIPROTKB|F1MPW4 [details] [associations]
symbol:SMC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090398 "cellular senescence" evidence=IEA] [GO:0045842
"positive regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0034184 "positive regulation of maintenance of
mitotic sister chromatid cohesion" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0000722 "telomere
maintenance via recombination" evidence=IEA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 GO:GO:0016605 GO:GO:0000724
GO:GO:0000781 GO:GO:0000722 GO:GO:0090398 GO:GO:0045842
GO:GO:0030915 GO:GO:0034184 PANTHER:PTHR19306:SF1 OMA:GMDPRNE
GeneTree:ENSGT00550000074963 EMBL:DAAA02022832 EMBL:DAAA02022833
EMBL:DAAA02022834 IPI:IPI00924353 Ensembl:ENSBTAT00000061396
Uniprot:F1MPW4
Length = 1103
Score = 685 (246.2 bits), Expect = 4.7e-65, P = 4.7e-65
Identities = 212/908 (23%), Positives = 411/908 (45%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G +GRA
Sbjct: 50 FVEGSIVRIAMENFLTYDVCEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRA 109
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VKRG G ++I L + +L I R+ID +N+S WF N K V E
Sbjct: 110 DKVGFFVKRGCSKGMVEIELFRTSG--NLVITREIDVAKNQSSWFINKKSTSPKVVEEQV 167
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
NIQV NL QFLPQD+V EFAKLS ++LLE TEK+VG P++ HC L K K +
Sbjct: 168 AALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSVGPPEMHKYHCELKNFREKEKQL 227
Query: 197 ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
E + K+ + L ++ N ++DV+R +R L+ +E ++ K PW++Y+ + EY
Sbjct: 228 ETSCKQKTEYLEKMIQRNERYKQDVDRFYERKRHLDLIEMLEAKRPWVEYENVRQEYEEV 287
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMDFL 313
+ ++ IE ++++ L+ ++ + I E S K + D +
Sbjct: 288 KLARDQAKEEVRKLKESQIPITERIEEMERQRHSLEARIREKALAIKETSQKCKHKQDVI 347
Query: 314 EKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEK 373
E+ D K + +P D I
Sbjct: 348 ERKDKQIEELQQALTVKQNEEHDRQRRISNTRKMIEDLQNELRTTENCENLQPQIDAITN 407
Query: 374 LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD-MEDKNNKLLHALRNSGA 432
++ + + + K ++ + L + K ++ R + M K +KL R++
Sbjct: 408 DLRRVQDEKALCESEIIDKRKERETLEKEKRSVDDHIVRFDNLMNQKEDKLRQRYRDT-- 465
Query: 433 ENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDR 492
++A WL+ +R + + P++L +N+ + +A Y+E+H+ ++F+ ++ D
Sbjct: 466 ---YDAVLWLRNNRDKFKQRVCEPIMLTINMKDNKNAKYIENHIPSNDLRAFVFENQEDM 522
Query: 493 DFLAKNLKPFDVPILNYV---SNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
+ K ++ +N V N + K P + +++ G + L ++FDAP V L
Sbjct: 523 EVFLKEVRDNKKLRVNAVIAPKNSYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSYL 582
Query: 550 ISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASVEPVNQS 608
Q+ + +G++ T +K + V + + +T E Y S Y V +S + +
Sbjct: 583 CCQYHIHEVPVGTERTREKIERVIQETRLKQIYTAEEKYVVKTSFYSNKVISSNTSLKVA 642
Query: 609 RLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIINI 668
+ L +VD + + +E + +L+++++E++
Sbjct: 643 QFLTVTVDLEQRRHLEEQLKEINRKLQAVDSGLIALHETNKHLEHKDNELRQKKKELLE- 701
Query: 669 VQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQFKYAIEIKNL 727
K K+R++E I+ + L+ +E++ ++ K + ++NIQ+ K E+ NL
Sbjct: 702 ---RKTKKRQLEQKISSKLGSLKLMEQDTCNLEEEERKASTKIKEINIQKAKLVTELTNL 758
Query: 728 LVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL-----HYEDCKKEVEH 782
I +C + +K ++ I E N + + +A A L H+ + + +
Sbjct: 759 ---IKNCTALHIQKVDLILQNTTVISEK--NKLESDYMATSAQLRITEQHFIELDENRQR 813
Query: 783 CRKHLSDAKRQAESIAFITPE--LEKEF-LEMPTTIEELEA----AIQD---NISQANSI 832
+ + ++A + + E + +E+ ++PT + A QD + + +++
Sbjct: 814 LLQKCKELMKRARQVCNLGAEQTVPQEYQTQVPTIPNGHNSSPPMAFQDLPNTLDEIDAL 873
Query: 833 FFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINET 892
++ + + + TK+E +E+++ AE+ +K+ L R ++Q+ E
Sbjct: 874 LTEERSRASCFTGLNPTVVEEYTKRE---EEIEQLTAELK-IKKVELDKYRENISQVKER 929
Query: 893 FSRNFQEM 900
+ +E+
Sbjct: 930 WLNPLKEL 937
Score = 606 (218.4 bits), Expect = 5.8e-56, P = 5.8e-56
Identities = 153/395 (38%), Positives = 227/395 (57%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
Q EQ+ I + L+ ++ N+ + E+RK IN++K KL + E + I A
Sbjct: 708 QLEQK-ISSKLGSLKLMEQDTCNLEE-EERKASTKIKEINIQKAKLVT-ELTNLIKNCTA 764
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVE---IVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 761
+ Q DL +Q E KN L S + E+H IE D + L K+
Sbjct: 765 LHI-QKVDLILQNTTVISE-KNKLESDYMATSAQLRITEQHF--IELDENRQRLLQKCKE 820
Query: 762 HEKLALQA-SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
K A Q +L E + E+ + + S +P + F ++P T++E++A
Sbjct: 821 LMKRARQVCNLGAEQTVPQ-EY-QTQVPTIPNGHNS----SPPMA--FQDLPNTLDEIDA 872
Query: 821 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 880
+ + S+A+ LN +++EY R+ +IE L+ + + K EL ++ I +KE+WL
Sbjct: 873 LLTEERSRASCFTGLNPTVVEEYTKREEEIEQLTAELKIKKVELDKYRENISQVKERWLN 932
Query: 881 TLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHH 939
L+ LV +INE FS F M AGEV L E+E D+DK+GI I+VKFR S +L L+ HH
Sbjct: 933 PLKELVEKINEKFSYFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTELHELTPHH 992
Query: 940 QSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCF 999
QSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +V A + NT Q F
Sbjct: 993 QSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYF 1052
Query: 1000 LLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
+TPKLL +L YSE ++L + NGP + +P++ W+
Sbjct: 1053 FITPKLLQNLPYSEKMTVLFVYNGPHMLEPNR-WN 1086
>WB|WBGene00016151 [details] [associations]
symbol:smc-5 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] [GO:0000794
"condensed nuclear chromosome" evidence=IDA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 GO:GO:0009792 GO:GO:0045132
eggNOG:COG1196 EMBL:FO080349 PANTHER:PTHR19306:SF1 OMA:GMDPRNE
GeneTree:ENSGT00550000074963 RefSeq:NP_494935.1
ProteinModelPortal:Q18237 SMR:Q18237 STRING:Q18237 PaxDb:Q18237
EnsemblMetazoa:C27A2.1 GeneID:173874 KEGG:cel:CELE_C27A2.1
UCSC:C27A2.1 CTD:173874 WormBase:C27A2.1 HOGENOM:HOG000017087
InParanoid:Q18237 NextBio:881489 Uniprot:Q18237
Length = 1076
Score = 423 (154.0 bits), Expect = 9.6e-65, Sum P(2) = 9.6e-65
Identities = 145/580 (25%), Positives = 258/580 (44%)
Query: 17 DYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGR 76
DY G+++ + HNF+T++H P + LN+++G NGSGKSS++C I LA GG + LGR
Sbjct: 16 DYPDGSLLRVVFHNFLTYEHTSFLPTASLNMILGHNGSGKSSIICGICLACGGSPKSLGR 75
Query: 77 ATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEIT 136
+ I Y++ G GY++I++ D ++ + I + ++ N + E+ ++
Sbjct: 76 SERIVEYIRHGCTEGYVEIAI-ADKQKGPQVVRLTIRVGEQPKYRLNDSATTQSEIADLR 134
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
K +NIQ++N FL QD+V F++ S ++LL TEKA L QH L+++ +I
Sbjct: 135 KHYNIQIDNPCAFLAQDKVKSFSEQSSIELLRNTEKAAS-ADLDQQHIDLMKQREDSTSI 193
Query: 197 E--CTVKRNGDTLNQLKALNVEQEKD---VERVRQRAELLEKVESMKKKLPWLKYDMKKA 251
E CT N +K L E K VE R++ L K+ ++KK+ ++++
Sbjct: 194 EDKCTTSENA-----IKRLEDEIGKIMPLVENYRKKLALQSKLRLLEKKMKIMEFEKFDR 248
Query: 252 EYIXXXXXXXXXXXXXXXXXNTLHEFSKP---IEG--KKQEKAI--LDGDCKKLSSLINE 304
EY ++ E K +E KK I + C ++ + + E
Sbjct: 249 EYKAELQNMDGAMIEYREVEKSIAECEKHRKNLEDRIKKDRSQISQMQRSCNEILAKVQE 308
Query: 305 NSKRRM--DFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVP 362
+++ D +++ K I +AR T+
Sbjct: 309 KGDKKLMEDMMQRAKAKLESAK---KAADQHEKDVEKARKMIDQARARLQEAV---DTLN 362
Query: 363 AYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
YE +++ L + + +R + E++ I + +RQ ++ +D E++N++
Sbjct: 363 GYEEFQSEMKSLEQKY------STAERDSRQEEDAI-QKKSYEMRQLENKKRD-EEQNSQ 414
Query: 423 L-----LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVG 477
L L+N ++ +AY W QQ+R + + Y P++ V + A A LE+ VG
Sbjct: 415 LNRQDRYRVLQNFSSD-ASKAYRWYQQNRSQFKGDVYMPIMDMVLKTPEA-AKALENSVG 472
Query: 478 HYIWKSFITQDAGDRDFLAKNLKPFDVPI-LNYVSNESSRKEPF--QISEEMRALGISAR 534
F+ D L N K I + V E E Q+ E+ LG
Sbjct: 473 VRDRTMFVC--CYKEDELLINGKQHSWRINTSVVPAEKIYSEDIDAQLPSELSRLGFKYL 530
Query: 535 LDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK 574
+ FDAP +K+ L + GL+ G + ++K V++
Sbjct: 531 VSNCFDAPAPLKQFLCNVSGLNRIPFGGSDVEKKIAEVSQ 570
Score = 326 (119.8 bits), Expect = 9.6e-65, Sum P(2) = 9.6e-65
Identities = 113/386 (29%), Positives = 193/386 (50%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK--EDDINTALAKLVD 708
+ E AKL+ E+++I IE E + N+ K+ + +K E+ I +++D
Sbjct: 682 LASEMAKLEALENEVVDISAIE-------EEYANVEKKAILETKKMLENSIRWH-KEIID 733
Query: 709 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ 768
+ + I + +I K+ V+ S AE H + +E D K ++K + L+
Sbjct: 734 KHRLIGIFELSESI-CKSR----VNKSNSEAETHRSKLE-DLK------SVKDAAEDLLK 781
Query: 769 ASLHYEDCKKE--VEHCRKHLSDAKRQAESIAFITPELEKEFLE--MPTTIEELEAAIQD 824
+L+++ ++ C D + + + I L K F E +PT + L+ AI
Sbjct: 782 TALNHKKAAASALMKECSLKTLDESKMSPAENKIYSSLVKMFEEADVPTDMNTLDQAITS 841
Query: 825 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DALKEK---WLP 880
++ ++ +E R + ++D ++ +++L A I D L ++ W
Sbjct: 842 EKTRLKLAEDSGEDGSIVHEQRLKVLDDDLVLEKTRQEKLIENRARIHDKLGDEINNWRK 901
Query: 881 TLRNLVAQINETFSRNFQEMAVAGEVSLD--EHESDFDKFGILIKVKFRQSGQLEVLSAH 938
+ ++ QIN + + F + GEVSL+ E+ D +K+GI+I V FR+ ++ L
Sbjct: 902 EVETMIEQINVNYVQFFDSLGCRGEVSLEVPENPLDIEKYGIMIMVCFRKGESMKRLDNK 961
Query: 939 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVR----AASQPN 994
QSGGERSV+T+LYL++LQ L PFR +DEINQGMDP NERK+F +V +
Sbjct: 962 VQSGGERSVATMLYLLALQQLCPVPFRCIDEINQGMDPTNERKVFDIMVGMWNGTTGTLS 1021
Query: 995 TPQCFLLTPKLLPDLEYSEACSILNI 1020
Q FLL+PKLL L+ E +I+ +
Sbjct: 1022 KTQYFLLSPKLLHGLDMRENVNIVMV 1047
Score = 41 (19.5 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
Identities = 7/37 (18%), Positives = 22/37 (59%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMEN 681
Q+E + +E + + +++ + + +Q + + R++EN
Sbjct: 368 QSEMKSLEQKYSTAERDSRQEEDAIQKKSYEMRQLEN 404
>UNIPROTKB|Q802R9 [details] [associations]
symbol:smc5 "Structural maintenance of chromosomes protein
5" species:31033 "Takifugu rubripes" [GO:0000722 "telomere
maintenance via recombination" evidence=ISS] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISS] [GO:0000781 "chromosome, telomeric region"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0016605 "PML
body" evidence=ISS] [GO:0030915 "Smc5-Smc6 complex" evidence=ISS]
[GO:0034184 "positive regulation of maintenance of mitotic sister
chromatid cohesion" evidence=ISS] [GO:0045842 "positive regulation
of mitotic metaphase/anaphase transition" evidence=ISS] [GO:0090398
"cellular senescence" evidence=ISS] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0051301
GO:GO:0007067 GO:GO:0016605 HSSP:P58301 GO:GO:0000724 GO:GO:0000781
GO:GO:0000722 GO:GO:0090398 GO:GO:0045842 eggNOG:COG1196
GO:GO:0030915 GO:GO:0034184 CTD:23137 PANTHER:PTHR19306:SF1
EMBL:AJ543329 RefSeq:NP_001027801.1 UniGene:Tru.1989
ProteinModelPortal:Q802R9 STRING:Q802R9 GeneID:445963
KEGG:tru:445963 InParanoid:Q802R9 Uniprot:Q802R9
Length = 1092
Score = 679 (244.1 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 220/908 (24%), Positives = 401/908 (44%)
Query: 19 MPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRAT 78
M G+I+ I + NF+T+D+ PG LN+++G NG+GKSS+VCAI L L G T +LGR
Sbjct: 40 MDGSILRITMRNFLTYDYTEVYPGPNLNMIVGANGTGKSSIVCAICLGLAGKTAVLGRGD 99
Query: 79 SIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRN-KSEWFFNGKVVPKGEVLEITK 137
+G YVKRG + G I+I L +L I R+I N +S W NGK + V E K
Sbjct: 100 KVGLYVKRGCQKGSIEIELY--KHGGNLVITREIHVENNQSHWMINGKQRNQKAVEEEVK 157
Query: 138 RFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIE 197
IQV+NL QFLPQ++V EFAK+S +LLE TEK+VG P++ HC L SK + +E
Sbjct: 158 NLCIQVSNLCQFLPQEKVGEFAKMSKTELLEATEKSVGPPEMFEFHCELKNFRSKERELE 217
Query: 198 CTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXX 257
TV + + K N + DV R ++ L+ +E ++KK PW++Y+ + E
Sbjct: 218 NTVTEKTKYIEKAKQRNERNKHDVNRYYEKKRHLDMIELLEKKKPWVEYESTRKELESVK 277
Query: 258 XXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMDFLE 314
++ + I+ + D K ++ I + + K++ D L+
Sbjct: 278 REREEAKRNLSALRHSQAPMIRKIKEIEDRLQPFDDQIKSQTAAIKDAALKCKQKQDQLD 337
Query: 315 KVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKL 374
+ +K + + P P +I +
Sbjct: 338 RKQKEIEDINQAFKLKEMEEDDHQKRISNTRRIIEDLRTELAKVEDQPDVTP---RINDV 394
Query: 375 GSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN--KLLHALRNSGA 432
S++ Q + R+ EK ++ + QC K + D NN K+
Sbjct: 395 NSELRRN--QIERARID-GEKCELCREKDNAFAQCRSLQKKLNDMNNLMKVKEEKLRGRH 451
Query: 433 ENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDR 492
+ A WL+Q+R+ Y P+LLE+NV + A Y+E+H+ ++F+ Q D
Sbjct: 452 RDTHAALQWLRQNRNRFRGNVYEPMLLEINVKDHRFAKYVENHISFQDLRAFVFQRKEDM 511
Query: 493 D-FLAKNLKPFDVPILNYVSNESSRK--EPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
+ F+++ ++ + + + E SR +P Q E++R G L ++FDAP V L
Sbjct: 512 EIFMSEVRDKMNLKVNSISAPEQSRSKAQPSQNIEDLRRFGFFTYLREMFDAPDEVMSYL 571
Query: 550 ISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASVEPVNQS 608
Q+ + + +G+++T V + L + +T + Y S Y +S PVN S
Sbjct: 572 CQQYNVHNVPVGTEQTKTMIRQVIEELNLRVLFTLDERYMLKRSVYSKMISTINSPVNPS 631
Query: 609 RLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIINI 668
+ L +VD +Q E +++ +L E++++ +
Sbjct: 632 QYLSIAVDAEEKRQLEQELNACELRFREIDERLKALQRETAVLDRRDNELLAEKKKLSEL 691
Query: 669 VQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQ------FKYA 721
K K+R++E I+ ++ L +E+ D+ + ++ + +N Q+ F +
Sbjct: 692 ----KGKKRQLEQKISTKQDSLRQMEQNVTDLKKIEEETKEKVSAVNSQKVTIVKAFIAS 747
Query: 722 IEIK-NLLVEIV--SCKWSYAEKHMASIEFDAK-----IRELEFNLKQHEKLALQASLHY 773
I++K L +E V S + +E D + +R ++ Q E+ +Q +
Sbjct: 748 IKLKATLTMEKVYLSLEMMGLSAEKTKLEHDFREGASLLRSMDQRCSQLEQRKVQLTEQG 807
Query: 774 EDCKKEVEH-CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI 832
+ K + C +D+ +E + + + +L +P+ + A + D +S+
Sbjct: 808 KGQMKRAKSICNMQPNDSL--SEELRNVRVYVIPPYLCVPSPLMAF-AKLPDTPDDIDSM 864
Query: 833 FFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINET 892
++ + + + D + + + KEL+ L E K+ L + R +++ E
Sbjct: 865 LNEERSRSECFTGLSENVVDEYNRSDQEIKELENELEE----KKNALESYRQNISEAKER 920
Query: 893 FSRNFQEM 900
+ +++
Sbjct: 921 WLNPLKQL 928
Score = 543 (196.2 bits), Expect = 5.4e-49, P = 5.4e-49
Identities = 129/389 (33%), Positives = 214/389 (55%)
Query: 656 AKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTALAKLVDQ----- 709
++L+ ++ ++ + ++ R+ME ++ +L+K + E+ EK +N+ +V
Sbjct: 689 SELKGKKRQLEQKISTKQDSLRQMEQNVTDLKKIEEETKEKVSAVNSQKVTIVKAFIASI 748
Query: 710 --AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-HEKLA 766
A L +++ ++E+ L E + + E D + +LE Q E+
Sbjct: 749 KLKATLTMEKVYLSLEMMGLSAEKTKLEHDFREGASLLRSMDQRCSQLEQRKVQLTEQGK 808
Query: 767 LQASLHYEDCKKEV-EHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 825
Q C + + + L + + P F ++P T +++++ + +
Sbjct: 809 GQMKRAKSICNMQPNDSLSEELRNVRVYVIPPYLCVPSPLMAFAKLPDTPDDIDSMLNEE 868
Query: 826 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 885
S++ L++N++ EY ++I++L + E K L+ + I KE+WL L+ L
Sbjct: 869 RSRSECFTGLSENVVDEYNRSDQEIKELENELEEKKNALESYRQNISEAKERWLNPLKQL 928
Query: 886 VAQINETFSRNFQEMAVAGEVSL-DEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGE 944
V QINE F+ F+ M AGEV L E E D+DK+GI I+VKF + QL L+ HQSGGE
Sbjct: 929 VEQINEKFTAFFRSMNCAGEVDLHSEKEEDYDKYGIRIRVKFHSNTQLHELTPFHQSGGE 988
Query: 945 RSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPK 1004
RSVST+LYL+SLQ+L CPFRVVDEINQGMDPINER++F +V A + T Q F +TPK
Sbjct: 989 RSVSTMLYLMSLQELNRCPFRVVDEINQGMDPINERRVFDIVVGTACKERTSQYFFITPK 1048
Query: 1005 LLPDLEYSEACSILNIMNGPWIEQPSKVW 1033
LL +L+Y+E ++L + NG ++ P++ W
Sbjct: 1049 LLQNLKYAEEMTVLCVHNGAYMLPPNQ-W 1076
>SGD|S000005394 [details] [associations]
symbol:SMC5 "Component of the SMC5-SMC6 complex" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0071139
"resolution of recombination intermediates" evidence=IMP]
[GO:0000725 "recombinational repair" evidence=IPI] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IDA;IMP] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0030915 "Smc5-Smc6
complex" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR027131 InterPro:IPR003395 SGD:S000005394
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 EMBL:BK006948
GO:GO:0003684 GO:GO:0016887 GO:GO:0003697 GO:GO:0000725
eggNOG:COG1196 GO:GO:0030915 PDB:3HTK PDBsum:3HTK GO:GO:0034500
PANTHER:PTHR19306:SF1 OMA:GMDPRNE GeneTree:ENSGT00550000074963
OrthoDB:EOG48KVKB EMBL:Z74776 PIR:S66717 RefSeq:NP_014608.1
ProteinModelPortal:Q08204 SMR:Q08204 DIP:DIP-1979N IntAct:Q08204
MINT:MINT-404105 STRING:Q08204 PaxDb:Q08204 EnsemblFungi:YOL034W
GeneID:854123 KEGG:sce:YOL034W CYGD:YOL034w HOGENOM:HOG000141775
EvolutionaryTrace:Q08204 NextBio:975828 Genevestigator:Q08204
GermOnline:YOL034W GO:GO:0071139 Uniprot:Q08204
Length = 1093
Score = 412 (150.1 bits), Expect = 1.7e-63, Sum P(2) = 1.7e-63
Identities = 124/378 (32%), Positives = 192/378 (50%)
Query: 672 EKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQAA-DLNIQQFKYAIEIKNLLV 729
E + E+ +RK +E++ EK D + K V Q D++ Q + ++ ++LL
Sbjct: 704 EAHQLNEIRKKYTMRKSTIETLREKLDQLKREARKDVSQKIKDIDDQIQQLLLKQRHLLS 763
Query: 730 EIVSCKWSY--AEKHMAS---IEFDAKIRELEFN--LKQHEKLALQASLHYEDCKKEVEH 782
++ S S +K + S ++F+A+ ++ N + + YED KK V+
Sbjct: 764 KMASSMKSLKNCQKELISTQILQFEAQNMDVSMNDVIGFFNEREADLKSQYEDKKKFVKE 823
Query: 783 CRK--HLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA-IQDNISQANS-IFFLNQN 838
R R+ S T E + E + +QD + + S I +N +
Sbjct: 824 MRDTPEFQSWMREIRSYDQDTKEKLNKVAEKYEEEGNFNLSFVQDVLDKLESEIAMVNHD 883
Query: 839 -----ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETF 893
IL + R++E +Q D + +K L E A+ E P L ++V++I+ F
Sbjct: 884 ESAVTILDQVTAELRELEHTVPQQSKDLETIKAKLKEDHAVLE---PKLDDIVSKISARF 940
Query: 894 SRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYL 953
+R F + AG V L E D+ ++ I I VKFR + L+ L +H QSGGER+VST+LY+
Sbjct: 941 ARLFNNVGSAGAVRL-EKPKDYAEWKIEIMVKFRDNAPLKKLDSHTQSGGERAVSTVLYM 999
Query: 954 VSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSE 1013
++LQ+ T+ PFRVVDEINQGMD NER + + +V A NT Q FL+TPKLL L Y E
Sbjct: 1000 IALQEFTSAPFRVVDEINQGMDSRNERIVHKAMVENACAENTSQYFLITPKLLTGLHYHE 1059
Query: 1014 ACSILNIMNGPWIEQPSK 1031
I +M G WI PS+
Sbjct: 1060 KMRIHCVMAGSWIPNPSE 1077
Score = 326 (119.8 bits), Expect = 1.7e-63, Sum P(2) = 1.7e-63
Identities = 83/251 (33%), Positives = 146/251 (58%)
Query: 4 PRVKRLKVSRGE-DDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCA 62
PR KR+K+++ + + PG+II+I L +F+T+ LN++IGPNGSGKS+ VCA
Sbjct: 22 PRSKRVKIAKPDLSSFQPGSIIKIRLQDFVTYTLTEFNLSPSLNMIIGPNGSGKSTFVCA 81
Query: 63 IALALGGDTQLLGRATSIGAYVKRGEESGYIKISLRG----------DTKEEHLTIMRKI 112
+ L L G + +GR+ + ++K G++ I+I+L+ D ++E + I R I
Sbjct: 82 VCLGLAGKPEYIGRSKKVEDFIKNGQDVSKIEITLKNSPNVTDIEYIDARDETIKITRII 141
Query: 113 DTRNK--SEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEET 170
TR+K S++ N V + V + + NIQ++NL QFL Q+RV EFA+L VKLL ET
Sbjct: 142 -TRSKRRSDYLINDYQVSESVVKTLVAQLNIQLDNLCQFLSQERVEEFARLKSVKLLVET 200
Query: 171 EKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAEL 230
+++ L V +++ +L+ E +++++ D + K +++ QE D ++R+ E
Sbjct: 201 IRSIDASLLDV-----LDELRELQGNEQSLQKDLD-FKKAKIVHLRQESD--KLRKSVES 252
Query: 231 LEKVESMKKKL 241
L ++ K ++
Sbjct: 253 LRDFQNKKGEI 263
Score = 59 (25.8 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 383 VQANQKRLQKS---EKEKI--LNQNKLTLRQCSDRLKDMEDKNNKL-LHALRNSGAENIF 436
+Q N++ LQK +K KI L Q LR+ + L+D ++K ++ LH+
Sbjct: 218 LQGNEQSLQKDLDFKKAKIVHLRQESDKLRKSVESLRDFQNKKGEIELHSQ--------L 269
Query: 437 EAYCWLQQHRHELN--KEAY 454
Y ++ H+ +LN KE Y
Sbjct: 270 LPYVKVKDHKEKLNIYKEEY 289
Score = 52 (23.4 bits), Expect = 4.2e-25, Sum P(3) = 4.2e-25
Identities = 29/144 (20%), Positives = 63/144 (43%)
Query: 660 KEREEIINIVQIEKRKRREMENHINLRKRK-LESIEKEDDINTALAKLVDQAADLNIQQF 718
K+++ N + + + E+ +L+ + L++ EK ++I L + D+ Q
Sbjct: 301 KDKKPFANTKKTLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQNE 360
Query: 719 KYAIEIKNLLVEIVSCKWSY--AEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDC 776
Y K L I+S K + +++ +A K + ++K+ E + + + D
Sbjct: 361 YYRGRTKKLQATIISTKEDFLRSQEILAQTHLPEKSVFEDIDIKRKEIINKEGEIR--DL 418
Query: 777 KKEVE---HCRKH-LSDAKRQAES 796
E++ + H + +RQAES
Sbjct: 419 ISEIDAKANAINHEMRSIQRQAES 442
Score = 47 (21.6 bits), Expect = 1.1e-24, Sum P(3) = 1.1e-24
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQ-KSEKEKILNQNKLTLRQ-CSDRLKDMEDKNNKLL 424
+D I + Q+ E+ + ++ ++ +EK L+Q K R+ S ++KD++D+ +LL
Sbjct: 698 NDDINREAHQLNEIRKKYTMRKSTIETLREK-LDQLKREARKDVSQKIKDIDDQIQQLL 755
Score = 46 (21.3 bits), Expect = 1.1e-24, Sum P(3) = 1.1e-24
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE---KED 697
+E E A + + E + I+ + RE+E+ + + + LE+I+ KED
Sbjct: 873 LESEIAMVNHD-ESAVTILDQVTAELRELEHTVPQQSKDLETIKAKLKED 921
Score = 45 (20.9 bits), Expect = 4.2e-25, Sum P(3) = 4.2e-25
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 838 NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
N+ EY R+ ++ LS ++ + EL ++ D + +
Sbjct: 665 NLKNEYNDRKSTLDALSNQKSGYRHELSELASKNDDINRE 704
Score = 43 (20.2 bits), Expect = 3.5e-24, Sum P(3) = 3.5e-24
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 706
E+ + ED + +R+EIIN + E++ N ++ SI+++ + T
Sbjct: 394 EKSVFED----IDIKRKEIINKEGEIRDLISEIDAKANAINHEMRSIQRQAESKTKSLTT 449
Query: 707 VDQAADLNIQQ 717
D+ LN Q
Sbjct: 450 TDKIGILNQDQ 460
Score = 42 (19.8 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 10/48 (20%), Positives = 26/48 (54%)
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMK 238
S+L + + R LN+++ ++ +E +R++ + L++ E+ K
Sbjct: 692 SELASKNDDINREAHQLNEIRKKYTMRKSTIETLREKLDQLKR-EARK 738
Score = 37 (18.1 bits), Expect = 9.1e-24, Sum P(3) = 9.1e-24
Identities = 33/131 (25%), Positives = 57/131 (43%)
Query: 465 NRAHANYLEDHVGHYIWKSFITQDAGDR---DFLAKNLKPFDVPILNYVSNESSRKEPFQ 521
N+ Y E+ G++ SF+ QD D+ + N V IL+ V+ E E
Sbjct: 849 NKVAEKYEEE--GNFNL-SFV-QDVLDKLESEIAMVNHDESAVTILDQVTAELRELE-HT 903
Query: 522 ISEEMRALG-ISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDF 580
+ ++ + L I A+L + D HAV E + S I ++ + +NV G +
Sbjct: 904 VPQQSKDLETIKAKLKE--D--HAVLEPKLDDI---VSKISARFA-RLFNNVGSAGAVRL 955
Query: 581 WTPENHYRWSI 591
P+++ W I
Sbjct: 956 EKPKDYAEWKI 966
>UNIPROTKB|D4A6A4 [details] [associations]
symbol:Smc5 "Protein Smc5" species:10116 "Rattus
norvegicus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0030915 "Smc5-Smc6 complex"
evidence=IEA] InterPro:IPR027131 InterPro:IPR003395 Pfam:PF02463
RGD:1307492 GO:GO:0016605 GO:GO:0000724 GO:GO:0000781 GO:GO:0000722
GO:GO:0090398 GO:GO:0045842 GO:GO:0030915 GO:GO:0034184
OrthoDB:EOG4VMFDP PANTHER:PTHR19306:SF1 IPI:IPI00768547
Ensembl:ENSRNOT00000042241 ArrayExpress:D4A6A4 Uniprot:D4A6A4
Length = 1102
Score = 668 (240.2 bits), Expect = 5.0e-63, P = 5.0e-63
Identities = 214/902 (23%), Positives = 405/902 (44%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G +GRA
Sbjct: 48 FVEGSIVRIAMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRA 107
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VKRG G ++I L + +L I R+ID +N+S WF N K V + V E
Sbjct: 108 DKVGFFVKRGCSKGLVEIELFRTSG--NLIITREIDVIKNQSFWFINKKPVTQKIVEEQV 165
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
NIQV NL QFLPQD+V EFAKLS ++LLE TEK++G P++ HC L K K +
Sbjct: 166 AALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQL 225
Query: 197 ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
E + K + L+++ N ++DVER +R L+ +E ++ K PW++Y+ + EY
Sbjct: 226 ETSCKEKTEYLDKMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEGV 285
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMDFL 313
++ IE ++++ L+ K+ ++ I E S K+R D +
Sbjct: 286 KLVRDRVKEEVRKLKEGQIPMTRRIEEIERQRRTLEVRIKEKATDIKEASQKCKQRQDLI 345
Query: 314 EKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEK 373
E+ D K + +P D I
Sbjct: 346 ERKDRHIKELQQALTVKQNEEQDRQKRISNTRKMIEDLQNELRTAENCENLQPQIDAITN 405
Query: 374 LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
++ E + + K ++++L + K R SD + ++ N+ LR +
Sbjct: 406 DLRRVQEEKALCEGEIIDKQREKEMLEKQK---RSVSDHITRFDNLMNQKEDKLRQRYRD 462
Query: 434 NIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRD 493
++A WL+ +R + P++L +N+ + +A Y+E+H+ ++F+ + D +
Sbjct: 463 T-YDAVLWLRNNRDRFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDME 521
Query: 494 FLAKNLKPFDVPILNYVSNES---SRKEPFQISEEMRALGISARLDQVFDAPHAVKEVLI 550
+ ++ +N V + K P + E++ G + L ++FDAP V L
Sbjct: 522 IFLREVRDNKKLRVNAVIAPKISYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLC 581
Query: 551 SQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASVEPVNQSR 609
Q+ + +G++ T ++ + V + + +T E Y S Y V +S + ++
Sbjct: 582 CQYHIHEVPVGTERTRERIERVIQETRLKQIYTAEEKYVLKTSFYSNKVISSNTSLKVAQ 641
Query: 610 LLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIINIV 669
L +VD ++ R +E + +L+ +++E++
Sbjct: 642 FLTVTVDLEQRRHLEEQLKEINRKLEAVDSGLVALRDTNRHLELKDNELRLKKKELLE-- 699
Query: 670 QIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQFKYAIEIKNLL 728
K K+R++E I+ + + +E++ ++ K + ++N+Q+ K E+ L+
Sbjct: 700 --RKTKKRQLEQKISSKLASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLV 757
Query: 729 VEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHEKLAL--QASLHYEDCKKEV-EHCR 784
S + + + ++ +LE + + +L + Q + +D ++ + + C
Sbjct: 758 KICTSLHIQKVDLILQNTTVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKC- 816
Query: 785 KHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ--ANSIFFLNQNILQE 842
K L RQ +++ + +EF TI ++ Q N++ ++ +L E
Sbjct: 817 KELMKRARQVCNLS-ADQAVPQEFQTQVPTIPNGHSSSPPMAFQDLPNTLDEIDA-LLTE 874
Query: 843 YEHRQRQIEDL--STKQEADKKELK--RFLAEIDALKEKWLPTLRNLVAQINETFSRNFQ 898
R L S +E K+E++ + E+ K + L R ++Q+ E + +
Sbjct: 875 ERSRASCFTGLNPSVVEEYTKREIEIQQLTEELKGKKVE-LDEYRENISQVKERWLNPLK 933
Query: 899 EM 900
E+
Sbjct: 934 EL 935
Score = 608 (219.1 bits), Expect = 3.5e-56, P = 3.5e-56
Identities = 154/402 (38%), Positives = 232/402 (57%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
Q EQ+ I + A ++ ++ N+ + E+RK IN++K KL T L
Sbjct: 706 QLEQK-ISSKLASIRLMEQDTCNLEE-EERKASTKIKEINVQKAKLV---------TELT 754
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF-NLKQHE 763
LV L+IQ K + ++N V +S K +MAS ++ E +F L +
Sbjct: 755 GLVKICTSLHIQ--KVDLILQNTTV--ISEKNKLEADYMASSS-QLRVTEQQFIELDDNR 809
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT--PELEK--------EFLEMPT 813
+ LQ CK+ ++ R+ + + QA F T P + F ++P
Sbjct: 810 QRLLQK------CKELMKRARQVCNLSADQAVPQEFQTQVPTIPNGHSSSPPMAFQDLPN 863
Query: 814 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 873
T++E++A + + S+A+ LN ++++EY R+ +I+ L+ + + K EL + I
Sbjct: 864 TLDEIDALLTEERSRASCFTGLNPSVVEEYTKREIEIQQLTEELKGKKVELDEYRENISQ 923
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQL 932
+KE+WL L+ LV +INE FS F M AGEV L E+E D+DK+GI I+VKFR S QL
Sbjct: 924 VKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQL 983
Query: 933 EVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 992
L+ HHQSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +V A +
Sbjct: 984 HELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACK 1043
Query: 993 PNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
NT Q F +TPKLL +L YSE ++L + NGP + +P++ W+
Sbjct: 1044 ENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEPNR-WN 1084
>MGI|MGI:2385088 [details] [associations]
symbol:Smc5 "structural maintenance of chromosomes 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
evidence=ISO] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISO] [GO:0000781 "chromosome,
telomeric region" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0016605 "PML body"
evidence=ISO] [GO:0030915 "Smc5-Smc6 complex" evidence=ISO]
[GO:0034184 "positive regulation of maintenance of mitotic sister
chromatid cohesion" evidence=ISO] [GO:0045842 "positive regulation
of mitotic metaphase/anaphase transition" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0090398 "cellular senescence"
evidence=ISO] InterPro:IPR027131 InterPro:IPR003395 Pfam:PF02463
MGI:MGI:2385088 GO:GO:0005524 GO:GO:0051301 GO:GO:0007067
GO:GO:0016605 GO:GO:0000724 GO:GO:0000781 GO:GO:0000722
GO:GO:0090398 GO:GO:0045842 eggNOG:COG1196 GO:GO:0030915
GO:GO:0034184 CTD:23137 HOGENOM:HOG000154342 HOVERGEN:HBG093963
OrthoDB:EOG4VMFDP PANTHER:PTHR19306:SF1 OMA:GMDPRNE ChiTaRS:SMC5
EMBL:AJ534941 EMBL:BC007174 EMBL:BC038345 EMBL:AK122321
IPI:IPI00380203 IPI:IPI00620557 RefSeq:NP_001239613.1
RefSeq:NP_722503.1 UniGene:Mm.23267 ProteinModelPortal:Q8CG46
SMR:Q8CG46 STRING:Q8CG46 PhosphoSite:Q8CG46 PaxDb:Q8CG46
PRIDE:Q8CG46 Ensembl:ENSMUST00000087556 GeneID:226026
KEGG:mmu:226026 UCSC:uc008haa.1 UCSC:uc008hab.1
GeneTree:ENSGT00550000074963 InParanoid:Q8CG46 NextBio:377941
Bgee:Q8CG46 CleanEx:MM_SMC5 Genevestigator:Q8CG46 Uniprot:Q8CG46
Length = 1101
Score = 665 (239.2 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 212/907 (23%), Positives = 407/907 (44%)
Query: 13 RGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQ 72
R ++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G
Sbjct: 43 RPSGTFVEGSIVRIAMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPA 102
Query: 73 LLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGE 131
+GRA +G +VKRG G ++I L + +L I R+ID +N+S WF N K V +
Sbjct: 103 FMGRADKVGFFVKRGCSKGLVEIELFRTSG--NLIITREIDVIKNQSFWFINKKPVTQKI 160
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
V E NIQV NL QFLPQD+V EFAKLS ++LLE TEK+VG P++ HC L
Sbjct: 161 VEEQVAALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSVGPPEMHRYHCELKNFRE 220
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKA 251
K K +E + K + L ++ N ++DVER +R L+ +E ++ K PW++Y+ +
Sbjct: 221 KEKQLETSCKEKTEYLEKMVQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQ 280
Query: 252 EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KR 308
EY ++ IE +++ L+ K+ S+ I E S K+
Sbjct: 281 EYEGVKLIRDRVKEEVRKLKEGQIPMTRRIEEIDRQRHTLEVRIKEKSTDIKEASQKCKQ 340
Query: 309 RMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPH 368
R D +E+ D K + +P
Sbjct: 341 RQDLIERKDRQIKELQQALTVKQNEELDRQKRISNTRKMIEDLQSELKTAENCENLQPQI 400
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
D + ++ E + + K ++++L + + R SD + ++ N+ LR
Sbjct: 401 DTVTNDLRRVQEEKALCEGEIIDKQREKEMLEKQR---RSVSDHITRFDNLMNQKEDKLR 457
Query: 429 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQD 488
+ ++A WL+ +R + P++L +N+ + +A Y+E+H+ ++F+ +
Sbjct: 458 QRYRDT-YDAVLWLRNNRDRFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFES 516
Query: 489 AGDRDFLAKNLKPFDVPILNYVSNES---SRKEPFQISEEMRALGISARLDQVFDAPHAV 545
D + + ++ +N V + K P + +++ G + L ++FDAP V
Sbjct: 517 QEDMEIFLREVRDNKKLRVNAVIAPKISYADKAPSRSLNDLKQYGFFSYLRELFDAPDPV 576
Query: 546 KEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASVEP 604
L Q+ + +G++ T ++ + V + + +T E Y S Y V +S
Sbjct: 577 MSYLCCQYHIHEVPVGTERTRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSNTS 636
Query: 605 VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREE 664
+ ++ L +VD ++ R +E + +L+ +++E
Sbjct: 637 LKVAQFLTVTVDLEQRRHLEEQLKEMNRQLEAVDSGLAALRDTNRHLELKDNELRLKKKE 696
Query: 665 IINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQFKYAIE 723
++ K ++R++E I+ + + +E++ ++ K + ++N+Q+ K E
Sbjct: 697 LLE----RKTRKRQLEQKISSKLASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTE 752
Query: 724 IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHEKLAL--QASLHYEDCKKEV 780
+ L+ S + + + + ++ +LE + + +L + Q + +D ++ +
Sbjct: 753 LTGLVKICTSFQIQKVDLILQNTTVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRL 812
Query: 781 -EHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ--ANSIFFLNQ 837
+ C++ + A RQ +++ + +EF TI ++ Q N++ ++
Sbjct: 813 LQKCKELMKKA-RQVCNLS-ADQAVPQEFQTQVPTIPNGHSSSPPMAFQDLPNTLDEIDA 870
Query: 838 NILQEYEHRQRQIEDL--STKQEADKKE--LKRFLAEIDALKEKWLPTLRNLVAQINETF 893
+L E R L S +E K+E +++ E+ K + L R ++Q+ E +
Sbjct: 871 -LLTEERSRASCFTGLNPSVVEEYSKREVEIQQLTEELQGKKVE-LDEYRENISQVKERW 928
Query: 894 SRNFQEM 900
+E+
Sbjct: 929 LNPLKEL 935
Score = 611 (220.1 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 145/400 (36%), Positives = 230/400 (57%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTALAK 705
E RL + E + + + ++ + + R ME NL + + ++ K +IN AK
Sbjct: 689 ELRLKKKELLERKTRKRQLEQKISSKLASIRLMEQDTCNLEEEERKASTKIKEINVQKAK 748
Query: 706 LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 765
LV + L + I+ +L+++ + +EK+ ++ A +L +Q +L
Sbjct: 749 LVTELTGLVKICTSFQIQKVDLILQNTTV---ISEKNKLEADYMASSSQLRVTEQQFIEL 805
Query: 766 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT--PELEK--------EFLEMPTTI 815
+ CK+ ++ R+ + + QA F T P + F ++P T+
Sbjct: 806 DDNRQRLLQKCKELMKKARQVCNLSADQAVPQEFQTQVPTIPNGHSSSPPMAFQDLPNTL 865
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
+E++A + + S+A+ LN ++++EY R+ +I+ L+ + + K EL + I +K
Sbjct: 866 DEIDALLTEERSRASCFTGLNPSVVEEYSKREVEIQQLTEELQGKKVELDEYRENISQVK 925
Query: 876 EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEV 934
E+WL L+ LV +INE FS F M AGEV L E+E D+DK+GI I+VKFR S QL
Sbjct: 926 ERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHE 985
Query: 935 LSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPN 994
L+ HHQSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +V A + N
Sbjct: 986 LTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKEN 1045
Query: 995 TPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
T Q F +TPKLL +L YSE ++L + NGP + +P++ W+
Sbjct: 1046 TSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEPNR-WN 1084
>UNIPROTKB|J9P883 [details] [associations]
symbol:SMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] InterPro:IPR027131 InterPro:IPR003395
Pfam:PF02463 CTD:23137 PANTHER:PTHR19306:SF1 OMA:GMDPRNE
GeneTree:ENSGT00550000074963 EMBL:AAEX03000569 RefSeq:XP_533529.3
Ensembl:ENSCAFT00000042950 GeneID:476327 KEGG:cfa:476327
Uniprot:J9P883
Length = 1106
Score = 657 (236.3 bits), Expect = 9.7e-62, P = 9.7e-62
Identities = 212/908 (23%), Positives = 412/908 (45%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G +GRA
Sbjct: 52 FVEGSIVRIVMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRA 111
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VKRG G ++I L + +L I R+ID +N+S WF N K + V E
Sbjct: 112 DKVGFFVKRGCSKGMVEIELFRTSG--NLIITREIDVAKNQSSWFINKKSTTQKVVEEQV 169
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
NIQV NL QFLPQD+V EFAKLS ++LLE TEK++G P++ HC L K K +
Sbjct: 170 AALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQL 229
Query: 197 ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
E + K + L ++ N ++DVER +R L+ +E ++ K PW++Y+ + EY
Sbjct: 230 ETSCKEKTEYLEKMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEEV 289
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMDFL 313
++ IE ++++ L+ K+ ++ I E S K++ D +
Sbjct: 290 KLARDRVKEEVRKLKEGQIPMTRRIEEIERQRHTLEARIKEKATDIKETSQKCKQKQDII 349
Query: 314 EKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEK 373
E+ D K + +P D I
Sbjct: 350 ERKDKQIEELQQALTVKQNEEHDRQRRISNTRKMIEDLQNELKTTENCENLQPQIDAITN 409
Query: 374 LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD-MEDKNNKLLHALRNSGA 432
++ + + + K +++ L + + ++ R + M K +KL R++
Sbjct: 410 DLRRVQDEKALCEGEVIDKRGEKESLEKERKSVGDNIVRFDNLMNQKEDKLRQRYRDT-- 467
Query: 433 ENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDR 492
++A WL+ +R + + P++L +N+ + +A Y+E+H+ ++F+ + D
Sbjct: 468 ---YDAVLWLRNNRDKFKQRVCEPIMLTINMKDNKNAKYIENHISSNDLRAFVFESQEDM 524
Query: 493 DFLAKNLKPFDVPILNYV-SNESSR--KEPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
+ K ++ +N V + +SS K P + E++ G + L ++FDAP V L
Sbjct: 525 EIFLKEIRDNKKLRVNAVIAPKSSYADKAPSRSLNELKPYGFFSYLRELFDAPDPVMSFL 584
Query: 550 ISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASVEPVNQS 608
+ + +G++ T ++ + V + + +T E Y S Y V +S + +
Sbjct: 585 CCHYHIHEVPVGTERTRERIERVIQETRLKQMYTAEEKYVVKTSFYSNKVISSNTSLKVA 644
Query: 609 RLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIINI 668
+ L +VD + + +E + +L+++++E++
Sbjct: 645 QFLTVTVDLEQRRHLEEQLKEINRKLQAVEAGLIALCERNKHLEHKDNELRQKKKELLE- 703
Query: 669 VQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQFKYAIEIKNL 727
K K+R++E I+ + L+ +E++ ++ K + ++N+Q+ K E+ N
Sbjct: 704 ---RKTKKRQLEQKISSKLGSLKLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTNF 760
Query: 728 LVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY-EDCKKEVEHCRKH 786
V+I C + +K ++ I E N + + +A + L E E++ R+
Sbjct: 761 -VKI--CTSLHIQKVDLILQNTTVISEK--NKLESDYMAASSQLRITEQHFIELDESRQR 815
Query: 787 L----SDAKRQAESIAFITPE--LEKEF-LEMPTTIEELEA----AIQD---NISQANSI 832
L + ++A + + E + +E+ ++PT + A QD + + +++
Sbjct: 816 LLQKCKELMKRARQVCNLGAEQTVPQEYQTQVPTIPNGHNSSPPMAFQDLPNTLDEIDAL 875
Query: 833 FFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINET 892
++ + + + TK+E +E+++ E+ +K+ L R ++Q+ E
Sbjct: 876 LTEERSRASCFTGLNPTVVEEYTKRE---EEIEQLTEELK-IKKVELDKYRENISQVKER 931
Query: 893 FSRNFQEM 900
+ +E+
Sbjct: 932 WLNPLKEL 939
Score = 604 (217.7 bits), Expect = 9.9e-56, P = 9.9e-56
Identities = 152/395 (38%), Positives = 227/395 (57%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
Q EQ+ I + L+ ++ N+ + E+RK IN++K KL + E + + +
Sbjct: 710 QLEQK-ISSKLGSLKLMEQDTCNLEE-EERKASTKIKEINVQKAKLVT-ELTNFVKICTS 766
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVE---IVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 761
+ Q DL +Q E KN L S + E+H IE D + L K+
Sbjct: 767 LHI-QKVDLILQNTTVISE-KNKLESDYMAASSQLRITEQHF--IELDESRQRLLQKCKE 822
Query: 762 HEKLALQA-SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
K A Q +L E + E+ + + S +P + F ++P T++E++A
Sbjct: 823 LMKRARQVCNLGAEQTVPQ-EY-QTQVPTIPNGHNS----SPPMA--FQDLPNTLDEIDA 874
Query: 821 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 880
+ + S+A+ LN +++EY R+ +IE L+ + + K EL ++ I +KE+WL
Sbjct: 875 LLTEERSRASCFTGLNPTVVEEYTKREEEIEQLTEELKIKKVELDKYRENISQVKERWLN 934
Query: 881 TLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHH 939
L+ LV +INE FS F M AGEV L E+E D+DK+GI I+VKFR S QL L+ HH
Sbjct: 935 PLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHH 994
Query: 940 QSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCF 999
QSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +V A + NT Q F
Sbjct: 995 QSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYF 1054
Query: 1000 LLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
+TPKLL +L YSE ++L + NGP + +P++ W+
Sbjct: 1055 FITPKLLQNLPYSEKMTVLFVYNGPHMLEPNR-WN 1088
>UNIPROTKB|F1SJC8 [details] [associations]
symbol:LOC100515003 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] InterPro:IPR027131
PANTHER:PTHR19306:SF1 GeneTree:ENSGT00550000074963 EMBL:CU074416
RefSeq:XP_003121995.3 Ensembl:ENSSSCT00000005790 GeneID:100515003
KEGG:ssc:100515003 Uniprot:F1SJC8
Length = 314
Score = 578 (208.5 bits), Expect = 2.4e-55, P = 2.4e-55
Identities = 112/228 (49%), Positives = 161/228 (70%)
Query: 808 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 867
F ++P T++E++A + + S+A+ LN ++QEY R+ +IE L+ + + K EL ++
Sbjct: 70 FQDLPNTLDEIDALLTEERSRASCFTGLNPTVVQEYTKREEEIEQLTEELKIKKVELDKY 129
Query: 868 LAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKF 926
I +KE+WL L+ LV +INE FS F M GEV L E+E D+DK+GI I+VKF
Sbjct: 130 RENISQVKERWLNPLKELVEKINEKFSHFFSSMQCGGEVDLHTENEEDYDKYGIRIRVKF 189
Query: 927 RQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
R + QL+ L+ HHQSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +
Sbjct: 190 RTNTQLQELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFELV 249
Query: 987 VRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
V A + NT Q F +TPKLL +L YS+ +IL + NGP + +P++ W+
Sbjct: 250 VNTACKENTSQYFFITPKLLQNLPYSDKMTILFVYNGPHMLEPNR-WN 296
>UNIPROTKB|F1P1S3 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9031 "Gallus gallus" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:AADN02068109 EMBL:AADN02068110
EMBL:AADN02078239 EMBL:AADN02078240 EMBL:AADN02078241
EMBL:AADN02078242 EMBL:AADN02078243 EMBL:AADN02078244
EMBL:AADN02078245 EMBL:AADN02078246 EMBL:AADN02078247
EMBL:AADN02078248 IPI:IPI00822772 Ensembl:ENSGALT00000038209
ArrayExpress:F1P1S3 Uniprot:F1P1S3
Length = 1057
Score = 594 (214.2 bits), Expect = 1.1e-54, P = 1.1e-54
Identities = 230/923 (24%), Positives = 410/923 (44%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D +PG LN++IG NG+GKSS+VCAI L L G LGRA
Sbjct: 1 FVEGSIVRIYMENFLTYDICEVRPGPNLNMIIGANGTGKSSIVCAICLGLAGKPSFLGRA 60
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VK+G G ++I L E++ I R+I N S W N K+ V E
Sbjct: 61 EKVGLFVKQGCLKGLVEIELF--KVPENIIITREIQVVTNTSTWHINRKLTTLKTVEEQV 118
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
NIQV+NL QFLPQD+V EFA++S ++LLE TEK++G P++ HC L K + +
Sbjct: 119 AALNIQVDNLCQFLPQDKVGEFARMSKIELLEATEKSIGPPEMYQFHCKLKSLKEKEREL 178
Query: 197 ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
E K ++L ++K ++DV+R + L+ ++ +++K PW++Y+ + ++
Sbjct: 179 ENVCKDKVNSLEKMKQRAERYKQDVDRYHECKRHLDLIDMLQRKRPWVEYETVRQQH--- 235
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQE-KAILDGDCKKLSSL------INENSKRR 309
L E P+ K +E + + K+ + +++ K +
Sbjct: 236 -EDVKQRRDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQKCKEK 294
Query: 310 MDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHD 369
D LE D + IL A TV E
Sbjct: 295 QDALEMKDKQISEINQALRMKKDEEVDRKKK---ILSAYKMIDEWNNELNTVTDCENLQP 351
Query: 370 KIEKLGSQILELGVQ-AN-QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN--KLLH 425
+I+ + +++ + + AN + EKI NQ + R DR+ + NN K+
Sbjct: 352 QIDAVNNELKHVQEERANIDSDIGDVTTEKI-NQERENGR-IIDRIGQL---NNIIKVKE 406
Query: 426 ALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEV---NVSNRAHANYLEDHVGHYIWK 482
+ + A WL++++H+ KE P++L NV + HA Y+E+H+ K
Sbjct: 407 ETLQARFRDTHSALMWLRKNKHKFKKEVCEPMMLTTSRSNVKDNKHAKYVENHISTNDMK 466
Query: 483 SFITQDAGDRDFLAKNLKPFDVPILNYV-SNESSRKE--PFQISEEMRALGISARLDQVF 539
+F+ + D + L+ +N V + + S E P EE+ G + L ++F
Sbjct: 467 AFVFESQEDMELFLVELRDRQKLRVNAVCAPDKSCAETLPSTPIEELHRYGFFSYLRELF 526
Query: 540 DAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHV 598
DAP V L SQ+ + +G+++T + V K + +T E Y +S Y +
Sbjct: 527 DAPLPVMSYLCSQYHVHEVPVGTEKTRNMIERVIKETKLKQIYTAEEKYTIKVSTYT-KL 585
Query: 599 SASVEP-VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAK 657
S S + ++ L VD + + Q+ +E +
Sbjct: 586 SFSTNMCLRPAQFLNYYVDTDERRQLENQQQNIKHILQSLDKQLMTLCERQKHLECRDNE 645
Query: 658 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA----DL 713
L+++++E++ +R+++E+ I ++ + +E ++ IN L K QA +
Sbjct: 646 LRQQKKELLE----RGSRRKQLESKIAVKYDSIRQLE-QNPIN--LEKESQQAKVKIRAI 698
Query: 714 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 773
NIQ+ K E+ + VS A+ + S DA+ LE K + L+AS
Sbjct: 699 NIQKAKLVTELMCHIKNYVSLNICKADLILQSTAVDAEKNRLEAEYKA-ASVELRASEES 757
Query: 774 E-DC----KKEVEHCRKHLSDAKRQAESIAFIT-PELEKEFL----EMPTTIEELEA--A 821
+ C + ++ CR LS Q S++ P E++ L +P++ A
Sbjct: 758 DFQCLNSKSRFMQLCRA-LSGENTQLCSLSVDPLPCYEEDLLPWDPRVPSSNSPYNAFQT 816
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK--QEADKK--ELKRFLAEIDALKEK 877
+ D + + ++ FLN E R LS +E K+ E+++ + I+ K++
Sbjct: 817 LPDTLEEIDA--FLN-----EERSRVSCFTGLSASVVEECSKQMEEIQKLMESIEENKKE 869
Query: 878 WLPTLRNLVAQINETFSRNFQEM 900
L + +++I E + ++M
Sbjct: 870 -LDDYKQSISKIKERWLNPLKKM 891
Score = 540 (195.1 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 133/402 (33%), Positives = 222/402 (55%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREME-NHINLRKRKLESIEKEDDINTALAK 705
E R + E + R+++ + + ++ R++E N INL K ++ K IN AK
Sbjct: 645 ELRQQKKELLERGSRRKQLESKIAVKYDSIRQLEQNPINLEKESQQAKVKIRAINIQKAK 704
Query: 706 LVDQAADLNIQQFKYAIEI--KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
LV + +I+ + ++ I +L+++ + AEK+ E+ A EL + +
Sbjct: 705 LVTELM-CHIKNY-VSLNICKADLILQSTAVD---AEKNRLEAEYKAASVELRASEESDF 759
Query: 764 KLALQASLHYEDCK----KEVEHCRKHLSDAKRQAESIAFITPELEKE------FLEMPT 813
+ S + C+ + + C + E + P + F +P
Sbjct: 760 QCLNSKSRFMQLCRALSGENTQLCSLSVDPLPCYEEDLLPWDPRVPSSNSPYNAFQTLPD 819
Query: 814 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 873
T+EE++A + + S+ + L+ ++++E + +I+ L E +KKEL + I
Sbjct: 820 TLEEIDAFLNEERSRVSCFTGLSASVVEECSKQMEEIQKLMESIEENKKELDDYKQSISK 879
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQL 932
+KE+WL L+ ++ INE FS F M GEV L E+E ++DK+GI I+VKF L
Sbjct: 880 IKERWLNPLKKMIESINEKFSGFFSSMESVGEVDLHVENEEEYDKYGIRIRVKFHNFTDL 939
Query: 933 EVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 992
L+ +HQSGGE+SVST+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ V+ A +
Sbjct: 940 HELTPYHQSGGEKSVSTVLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMFVKTACK 999
Query: 993 PNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
+T Q FL+TPKLL +L Y+E ++L + NGP++ + +K W+
Sbjct: 1000 ESTSQYFLITPKLLQNLTYNEKMTLLFVYNGPFMLEANK-WN 1040
>UNIPROTKB|F1P1S2 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9031 "Gallus gallus" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:AADN02068109 EMBL:AADN02068110
EMBL:AADN02078239 EMBL:AADN02078240 EMBL:AADN02078241
EMBL:AADN02078242 EMBL:AADN02078243 EMBL:AADN02078244
EMBL:AADN02078245 EMBL:AADN02078246 EMBL:AADN02078247
EMBL:AADN02078248 IPI:IPI00818651 Ensembl:ENSGALT00000038210
ArrayExpress:F1P1S2 Uniprot:F1P1S2
Length = 1060
Score = 594 (214.2 bits), Expect = 1.1e-54, P = 1.1e-54
Identities = 214/820 (26%), Positives = 363/820 (44%)
Query: 21 GNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
G+I+ I + NF+T+D +PG LN++IG NG+GKSS+VCAI L L G LGRA +
Sbjct: 3 GSIVRIYMENFLTYDICEVRPGPNLNMIIGANGTGKSSIVCAICLGLAGKPSFLGRAEKV 62
Query: 81 GAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEITKRF 139
G +VK+G G ++I L E++ I R+I N S W N K+ V E
Sbjct: 63 GLFVKQGCLKGLVEIELF--KVPENIIITREIQVVTNTSTWHINRKLTTLKTVEEQVAAL 120
Query: 140 NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECT 199
NIQV+NL QFLPQD+V EFA++S ++LLE TEK++G P++ HC L K + +E
Sbjct: 121 NIQVDNLCQFLPQDKVGEFARMSKIELLEATEKSIGPPEMYQFHCKLKSLKEKERELENV 180
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXX 259
K ++L ++K ++DV+R + L+ ++ +++K PW++Y+ + ++
Sbjct: 181 CKDKVNSLEKMKQRAERYKQDVDRYHECKRHLDLIDMLQRKRPWVEYETVRQQH----ED 236
Query: 260 XXXXXXXXXXXXNTLHEFSKPIEGKKQE-KAILDGDCKKLSSL------INENSKRRMDF 312
L E P+ K +E + + K+ + +++ K + D
Sbjct: 237 VKQRRDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQKCKEKQDA 296
Query: 313 LEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIE 372
LE D + IL A TV E +I+
Sbjct: 297 LEMKDKQISEINQALRMKKDEEVDRKKK---ILSAYKMIDEWNNELNTVTDCENLQPQID 353
Query: 373 KLGSQILELGVQ-AN-QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN--KLLHALR 428
+ +++ + + AN + EKI NQ + R DR+ + NN K+
Sbjct: 354 AVNNELKHVQEERANIDSDIGDVTTEKI-NQERENGR-IIDRIGQL---NNIIKVKEETL 408
Query: 429 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEV---NVSNRAHANYLEDHVGHYIWKSFI 485
+ + A WL++++H+ KE P++L NV + HA Y+E+H+ K+F+
Sbjct: 409 QARFRDTHSALMWLRKNKHKFKKEVCEPMMLTTSRSNVKDNKHAKYVENHISTNDMKAFV 468
Query: 486 TQDAGDRDFLAKNLKPFDVPILNYV-SNESSRKE--PFQISEEMRALGISARLDQVFDAP 542
+ D + L+ +N V + + S E P EE+ G + L ++FDAP
Sbjct: 469 FESQEDMELFLVELRDRQKLRVNAVCAPDKSCAETLPSTPIEELHRYGFFSYLRELFDAP 528
Query: 543 HAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSAS 601
V L SQ+ + +G+++T + V K + +T E Y +S Y +S S
Sbjct: 529 LPVMSYLCSQYHVHEVPVGTEKTRNMIERVIKETKLKQIYTAEEKYTIKVSTYT-KLSFS 587
Query: 602 VEP-VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQK 660
+ ++ L VD + + Q+ +E +L++
Sbjct: 588 TNMCLRPAQFLNYYVDTDERRQLENQQQNIKHILQSLDKQLMTLCERQKHLECRDNELRQ 647
Query: 661 EREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA----DLNIQ 716
+++E++ +R+++E+ I ++ + +E ++ IN L K QA +NIQ
Sbjct: 648 QKKELLE----RGSRRKQLESKIAVKYDSIRQLE-QNPIN--LEKESQQAKVKIRAINIQ 700
Query: 717 QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS------ 770
+ K E+ + VS A+ + S DA+ LE K + L+AS
Sbjct: 701 KAKLVTELMCHIKNYVSLNICKADLILQSTAVDAEKNRLEAEYKA-ASVELRASENQLPI 759
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 810
LH C EH R + D ES +P L + F E
Sbjct: 760 LHKTSCTIG-EHNRMQIEDI----ESSCNRSPALVQTFTE 794
Score = 537 (194.1 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 137/406 (33%), Positives = 225/406 (55%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREME-NHINLRKRKLESIEKEDDINTALAK 705
E R + E + R+++ + + ++ R++E N INL K ++ K IN AK
Sbjct: 644 ELRQQKKELLERGSRRKQLESKIAVKYDSIRQLEQNPINLEKESQQAKVKIRAINIQKAK 703
Query: 706 LVDQAADLNIQQFKYAIEI--KNLLVEIVSCKWSYAEKHMASIEFDA---KIRELEFNLK 760
LV + +I+ + ++ I +L+++ + AEK+ E+ A ++R E L
Sbjct: 704 LVTELM-CHIKNY-VSLNICKADLILQSTAVD---AEKNRLEAEYKAASVELRASENQLP 758
Query: 761 QHEKLALQASLHYEDCKKEVEH-CRKHLSDAKRQAESIAFIT----PELEKE------FL 809
K + H +++E C + + + E A I P F
Sbjct: 759 ILHKTSCTIGEHNRMQIEDIESSCNRSPALVQTFTEGTAKICFRGIPGYRARIRPIMAFQ 818
Query: 810 EMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLA 869
+P T+EE++A + + S+ + L+ ++++E + +I+ L E +KKEL +
Sbjct: 819 TLPDTLEEIDAFLNEERSRVSCFTGLSASVVEECSKQMEEIQKLMESIEENKKELDDYKQ 878
Query: 870 EIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQ 928
I +KE+WL L+ ++ INE FS F M GEV L E+E ++DK+GI I+VKF
Sbjct: 879 SISKIKERWLNPLKKMIESINEKFSGFFSSMESVGEVDLHVENEEEYDKYGIRIRVKFHN 938
Query: 929 SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVR 988
L L+ +HQSGGE+SVST+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ V+
Sbjct: 939 FTDLHELTPYHQSGGEKSVSTVLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMFVK 998
Query: 989 AASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
A + +T Q FL+TPKLL +L Y+E ++L + NGP++ + +K W+
Sbjct: 999 TACKESTSQYFLITPKLLQNLTYNEKMTLLFVYNGPFMLEANK-WN 1043
>UNIPROTKB|F1P1S7 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9031 "Gallus gallus" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:AADN02068109 EMBL:AADN02068110
EMBL:AADN02078239 EMBL:AADN02078240 EMBL:AADN02078241
EMBL:AADN02078242 EMBL:AADN02078243 EMBL:AADN02078244
EMBL:AADN02078245 EMBL:AADN02078246 EMBL:AADN02078247
EMBL:AADN02078248 IPI:IPI00819545 Ensembl:ENSGALT00000038207
ArrayExpress:F1P1S7 Uniprot:F1P1S7
Length = 1056
Score = 588 (212.0 bits), Expect = 5.0e-54, P = 5.0e-54
Identities = 224/915 (24%), Positives = 400/915 (43%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D +PG LN++IG NG+GKSS+VCAI L L G LGRA
Sbjct: 1 FVEGSIVRIYMENFLTYDICEVRPGPNLNMIIGANGTGKSSIVCAICLGLAGKPSFLGRA 60
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VK+G G ++I L E++ I R+I N S W N K+ V E
Sbjct: 61 EKVGLFVKQGCLKGLVEIELF--KVPENIIITREIQVVTNTSTWHINRKLTTLKTVEEQV 118
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
NIQV+NL QFLPQD+V EFA++S ++LLE TEK++G P++ HC L K + +
Sbjct: 119 AALNIQVDNLCQFLPQDKVGEFARMSKIELLEATEKSIGPPEMYQFHCKLKSLKEKEREL 178
Query: 197 ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
E K ++L ++K ++DV+R + L+ ++ +++K PW++Y+ + ++
Sbjct: 179 ENVCKDKVNSLEKMKQRAERYKQDVDRYHECKRHLDLIDMLQRKRPWVEYETVRQQH--- 235
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQE-KAILDGDCKKLSSL------INENSKRR 309
L E P+ K +E + + K+ + +++ K +
Sbjct: 236 -EDVKQRRDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQKCKEK 294
Query: 310 MDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHD 369
D LE D + IL A TV E
Sbjct: 295 QDALEMKDKQISEINQALRMKKDEEVDRKKK---ILSAYKMIDEWNNELNTVTDCENLQP 351
Query: 370 KIEKLGSQILELGVQ-AN-QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN--KLLH 425
+I+ + +++ + + AN + EKI NQ + R DR+ + NN K+
Sbjct: 352 QIDAVNNELKHVQEERANIDSDIGDVTTEKI-NQERENGR-IIDRIGQL---NNIIKVKE 406
Query: 426 ALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEV---NVSNRAHANYLEDHVGHYIWK 482
+ + A WL++++H+ KE P++L NV + HA Y+E+H+ K
Sbjct: 407 ETLQARFRDTHSALMWLRKNKHKFKKEVCEPMMLTTSRSNVKDNKHAKYVENHISTNDMK 466
Query: 483 SFITQDAGDRDFLAKNLKPFDVPILNYV-SNESSRKE--PFQISEEMRALGISARLDQVF 539
+F+ + D + L+ +N V + + S E P EE+ G + L ++F
Sbjct: 467 AFVFESQEDMELFLVELRDRQKLRVNAVCAPDKSCAETLPSTPIEELHRYGFFSYLRELF 526
Query: 540 DAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHV 598
DAP V L SQ+ + +G+++T + V K + +T E Y +S Y +
Sbjct: 527 DAPLPVMSYLCSQYHVHEVPVGTEKTRNMIERVIKETKLKQIYTAEEKYTIKVSTYT-KL 585
Query: 599 SASVEP-VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAK 657
S S + ++ L VD + + Q+ +E +
Sbjct: 586 SFSTNMCLRPAQFLNYYVDTDERRQLENQQQNIKHILQSLDKQLMTLCERQKHLECRDNE 645
Query: 658 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA----DL 713
L+++++E++ +R+++E+ I ++ + +E ++ IN L K QA +
Sbjct: 646 LRQQKKELLE----RGSRRKQLESKIAVKYDSIRQLE-QNPIN--LEKESQQAKVKIRAI 698
Query: 714 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS-LH 772
NIQ+ K E+ + VS A+ + S DA+ LE K + L+AS +
Sbjct: 699 NIQKAKLVTELMCHIKNYVSLNICKADLILQSTAVDAEKNRLEAEYKA-ASVELRASEVK 757
Query: 773 YE-DCKKEVEH--CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 829
+ D +++ C+ +A+ FI K + M T L + + +
Sbjct: 758 FVMDKNRQLSLSVCQSSRCEARTVCRE-EFIFKLSVKLWSNMKTLKSGLSSYLPEAFQTL 816
Query: 830 NSIFFLNQNILQEYEHRQRQIEDLSTK--QEADKK--ELKRFLAEIDALKEKWLPTLRNL 885
L E R LS +E K+ E+++ + I+ K++ L +
Sbjct: 817 PDTLEEIDAFLNEERSRVSCFTGLSASVVEECSKQMEEIQKLMESIEENKKE-LDDYKQS 875
Query: 886 VAQINETFSRNFQEM 900
+++I E + ++M
Sbjct: 876 ISKIKERWLNPLKKM 890
Score = 559 (201.8 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 142/404 (35%), Positives = 229/404 (56%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREME-NHINLRKRKLESIEKEDDINTALAK 705
E R + E + R+++ + + ++ R++E N INL K ++ K IN AK
Sbjct: 645 ELRQQKKELLERGSRRKQLESKIAVKYDSIRQLEQNPINLEKESQQAKVKIRAINIQKAK 704
Query: 706 LVDQA-------ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
LV + LNI K + +++ V+ + AE AS+E A E++F
Sbjct: 705 LVTELMCHIKNYVSLNI--CKADLILQSTAVDAEKNRLE-AEYKAASVELRAS--EVKFV 759
Query: 759 LKQHEKLALQA--SLHYED---CKKEV--EHCRKHLSDAKRQAESIAFITPELEKEFLEM 811
+ ++ +L+L S E C++E + K S+ K ++ PE F +
Sbjct: 760 MDKNRQLSLSVCQSSRCEARTVCREEFIFKLSVKLWSNMKTLKSGLSSYLPEA---FQTL 816
Query: 812 PTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 871
P T+EE++A + + S+ + L+ ++++E + +I+ L E +KKEL + I
Sbjct: 817 PDTLEEIDAFLNEERSRVSCFTGLSASVVEECSKQMEEIQKLMESIEENKKELDDYKQSI 876
Query: 872 DALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSG 930
+KE+WL L+ ++ INE FS F M GEV L E+E ++DK+GI I+VKF
Sbjct: 877 SKIKERWLNPLKKMIESINEKFSGFFSSMESVGEVDLHVENEEEYDKYGIRIRVKFHNFT 936
Query: 931 QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAA 990
L L+ +HQSGGE+SVST+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ V+ A
Sbjct: 937 DLHELTPYHQSGGEKSVSTVLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMFVKTA 996
Query: 991 SQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1034
+ +T Q FL+TPKLL +L Y+E ++L + NGP++ + +K W+
Sbjct: 997 CKESTSQYFLITPKLLQNLTYNEKMTLLFVYNGPFMLEANK-WN 1039
>ZFIN|ZDB-GENE-040426-1624 [details] [associations]
symbol:pufa "PUF (Pumilio/FBF) domain-containing
A" species:7955 "Danio rerio" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0030915 "Smc5-Smc6
complex" evidence=IEA] [GO:0008354 "germ cell migration"
evidence=IMP] InterPro:IPR027131 ZFIN:ZDB-GENE-040426-1624
GO:GO:0008354 HOGENOM:HOG000154342 PANTHER:PTHR19306:SF1
EMBL:BC055623 IPI:IPI00483675 ProteinModelPortal:Q7SXF8
STRING:Q7SXF8 ArrayExpress:Q7SXF8 Uniprot:Q7SXF8
Length = 418
Score = 487 (176.5 bits), Expect = 5.9e-51, Sum P(2) = 5.9e-51
Identities = 99/239 (41%), Positives = 148/239 (61%)
Query: 15 EDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLL 74
E D+M G I+ I +HNF+T+DH PG +LN+++G NG+GKSS+VCAI L L G T +L
Sbjct: 34 EGDFMEGAIVRITMHNFLTYDHSEVFPGPKLNMIVGANGTGKSSIVCAICLGLAGKTSVL 93
Query: 75 GRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRN-KSEWFFNGKVVPKGEVL 133
GR +G YVKRG + G ++I L T+ +L + R+I N +S W N K + V
Sbjct: 94 GRGDKVGLYVKRGCQRGSVEIELYR-TRG-NLIVTREIQVENNQSTWMLNKKHASQKAVE 151
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E + +IQV NL QFLPQ++V EFAK+S +LLE TEK+VG P++ HC L +K
Sbjct: 152 EAVRELHIQVGNLCQFLPQEKVGEFAKMSNSELLEATEKSVGPPEMYEFHCELKTFRTKE 211
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ +E K G+ L + + N + DVER + L++++ ++KK PW++Y+ + E
Sbjct: 212 RDLENVCKEKGNFLEKARQRNERNKLDVERYYMKKRHLDRIQMLEKKKPWVEYETARKE 270
Score = 78 (32.5 bits), Expect = 5.9e-51, Sum P(2) = 5.9e-51
Identities = 41/174 (23%), Positives = 87/174 (50%)
Query: 740 EKHMASIE-FDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIA 798
E++ +E + K R L+ ++ EK + + YE +KE+E +K + KR+ +
Sbjct: 233 ERNKLDVERYYMKKRHLD-RIQMLEKK--KPWVEYETARKELEGVKKERDEMKRK---LR 286
Query: 799 FITPELEKEFLEMPTTIE-ELEAAIQDNISQANSIFFLNQNILQEYEHRQ-RQIEDLSTK 856
F+ E ++ L ++E EL+ Q N I Q Q+++ + +++ DL +K
Sbjct: 287 FLK-EAQEPLLRKIRSVESELQPIEQQMKEMTNRIKEATQKCKQKHDQLELKKLSDLKSK 345
Query: 857 QEADKKELKRFLA-EIDALKEKWLPTLRNLVAQINETFSR----NFQEMAVAGE 905
K++L++ ++ + D+L++ + NLVA E ++ N +++ + GE
Sbjct: 346 ----KRQLEQKISTKQDSLRQMEQNEI-NLVAIEEEANAKIAAVNNKKVTIMGE 394
Score = 52 (23.4 bits), Expect = 3.2e-48, Sum P(2) = 3.2e-48
Identities = 12/49 (24%), Positives = 30/49 (61%)
Query: 654 EAAKLQKEREEIINIVQIE--KRKRREMENHINLRKRKLESIEKEDDIN 700
EA + K++ + + + ++ K K+R++E I+ ++ L +E +++IN
Sbjct: 322 EATQKCKQKHDQLELKKLSDLKSKKRQLEQKISTKQDSLRQME-QNEIN 369
Score = 48 (22.0 bits), Expect = 8.5e-48, Sum P(2) = 8.5e-48
Identities = 13/56 (23%), Positives = 32/56 (57%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRK-LESIEK--EDDINT 701
R +E E ++++ +E+ N ++ +K ++ + + L+K L+S ++ E I+T
Sbjct: 300 RSVESELQPIEQQMKEMTNRIKEATQKCKQKHDQLELKKLSDLKSKKRQLEQKIST 355
Score = 43 (20.2 bits), Expect = 2.8e-47, Sum P(2) = 2.8e-47
Identities = 15/65 (23%), Positives = 33/65 (50%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
M+ + R +++ L ++ + + +Q +++ +EM N I +K + +K D + L
Sbjct: 281 MKRKLRFLKEAQEPLLRKIRSVESELQPIEQQMKEMTNRIKEATQKCK--QKHDQLE--L 336
Query: 704 AKLVD 708
KL D
Sbjct: 337 KKLSD 341
>CGD|CAL0001481 [details] [associations]
symbol:SMC5 species:5476 "Candida albicans" [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005816
"spindle pole body" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0071139 "resolution of recombination
intermediates" evidence=IEA] [GO:0000725 "recombinational repair"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0036170 "filamentous growth of a population of unicellular
organisms in response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR027131 InterPro:IPR003395 CGD:CAL0001481 Pfam:PF02463
GO:GO:0005524 GO:GO:0007059 GO:GO:0071216 GO:GO:0036180
GO:GO:0003677 GO:GO:0009267 GO:GO:0030261 GO:GO:0036170
EMBL:AACQ01000131 EMBL:AACQ01000130 GO:GO:0009295 eggNOG:COG1196
PANTHER:PTHR19306:SF1 RefSeq:XP_713250.1 RefSeq:XP_713303.1
ProteinModelPortal:Q59UE8 STRING:Q59UE8 GeneID:3645087
GeneID:3645103 KEGG:cal:CaO19.2417 KEGG:cal:CaO19.9955
HOGENOM:HOG000247851 Uniprot:Q59UE8
Length = 1073
Score = 413 (150.4 bits), Expect = 8.1e-35, P = 8.1e-35
Identities = 215/932 (23%), Positives = 381/932 (40%)
Query: 7 KRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALA 66
KR KV + PG I ++ + NF T+ + LN++IGPNGSGKS+LV +I +
Sbjct: 11 KRRKVLE-PSKFRPGFIRKVRVWNFTTYSYTEFNLSPTLNMIIGPNGSGKSTLVASICIG 69
Query: 67 LGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKV 126
L G L+ R ++ + +K G+E ++I++ + I R+ T +S W N K
Sbjct: 70 LAGSINLIKRK-NLKSMIKTGQEKSSVEITIENYEGHSPIVIKREF-TAKESNWTVNNKR 127
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
+ ++ +I +FNIQ++NL FLPQ+RV EFA LSP KLL ETE+ +GD L + H L
Sbjct: 128 ATESKIKDIRTKFNIQLDNLCHFLPQERVAEFAGLSPEKLLMETERTLGDGHLLIMHEDL 187
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
+ K ++ + + +K L +L + E++ ++ + E+V++ + +P+ KY
Sbjct: 188 IAKDNESQQLGNKIKDIEGRLAKLHEDRSKLEEEARKLEEYDRKSEEVDNHRLLIPYAKY 247
Query: 247 -DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGK--KQEKAILDGDCK------K 297
D+K T KP+E EK+I + K
Sbjct: 248 QDLKNQR-----THLKRLRDEAKHKLRTFQANFKPLENDIANAEKSINEESEKYSHLKDS 302
Query: 298 LSSLINENSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXX 357
L S +NE ++ + ++V K I K
Sbjct: 303 LKSTLNEINQHKST-QKQVTTEISELRANLKSYQTRAEQKKKELEEIKKEIAELQEKQRG 361
Query: 358 XQTVPAYEPPHDKIEKLGS--QILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD 415
V E + E ++ +L Q + Q+S+ + L LR RL
Sbjct: 362 LPQVDPEEMQNLSTESTSKRHELRDLEEQFQEVNSQRSDIGRELTHLTEQLRGAEKRLST 421
Query: 416 MEDKNNKLLHALRNSGAENIF--EAYCWLQQHRHELNKEA-Y--GPVLLEVNVSNRAHAN 470
+DK + L+ R +G EA+ ++ R+E E Y PV+ NV + +A
Sbjct: 422 -KDKLDMLVSDARQNGRSYRLRDEAFDVHKRLRNEPEYEGRYFEAPVI-SCNVPDINYAA 479
Query: 471 YLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI-LNYVSNESSRKEPFQISEEMRAL 529
E + + +F + D DFL+K + + L V++ + + ++R
Sbjct: 480 AAEKIIDNNTLFAFTVTNQSDFDFLSKFSQQTNTNTPLRMVNSVVNPTHEYS-KHQLREF 538
Query: 530 GISARLDQVFDAPHAVKEVLISQFGLDSSYIG----SKETDQKADNVA---KLGILDFWT 582
G L P V +L S + + + S E ++ NV+ +L F
Sbjct: 539 GFEGYLSDYIVGPKEVLSMLYSTSKIHTIPVSKHQLSSEQVRRLTNVSGNDRLPFTKFVA 598
Query: 583 PENHYRWSISRYGGHVSASV-EPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXX 641
+ Y S+YG + + E + +S+ V G
Sbjct: 599 GDTLYNIQRSKYGSQQAFYITEKIGRSQYF--GVQGLSQEAKDAINAEISKFKEKIEQKK 656
Query: 642 XXMQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES-IEKEDDIN 700
+ + I+ +L + + I +I KRK+ E++ I+ R +L++ IE + +
Sbjct: 657 RAYEGHRNNIDSFNERLTEIKHYIHDI----KRKQSELQE-ISKRAGQLQTKIELKKERE 711
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
L K + I+ F+ I+ K L + S + + E K+++LE
Sbjct: 712 QKLEKDSKRDYSSKIRMFEQKIDEKYLASGELFASLSNSVLELCEKENQMKLKKLEIIGY 771
Query: 761 QHEKLALQASL-----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 815
+++KL ++ L E K + ++ + K Q+E AF E+E++ E T
Sbjct: 772 KNKKLTAESLLDELGARQEKLKNDYNRYKREYDEIK-QSE--AF--KEIERQN-EAYTDE 825
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
E A + N F I + + + ++ L+T LK+ L +I L
Sbjct: 826 ERSRLADLAQVYVENGTF-TEATIRSKIDLLEDELSLLTTADRGSIDALKQKLQDIQ-LA 883
Query: 876 EKWLPTLRNLVAQINETFSRNFQEMAVAGEVS 907
E LP L+ ++ +T + QE GE++
Sbjct: 884 ETNLPLLQTEKERL-DTRIKGIQE-EYEGELT 913
Score = 353 (129.3 bits), Expect = 2.6e-28, P = 2.6e-28
Identities = 114/384 (29%), Positives = 194/384 (50%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQ-IEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
Q+E + I A +LQ + E Q +EK +R+ + I + ++K++ EK
Sbjct: 687 QSELQEISKRAGQLQTKIELKKEREQKLEKDSKRDYSSKIRMFEQKID--EKYLASGELF 744
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
A L + +L ++ + +++K L EI+ K E A+ +L+ + +++
Sbjct: 745 ASLSNSVLELCEKENQ--MKLKKL--EIIGYKNKKLTAESLLDELGARQEKLKNDYNRYK 800
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKR-QAESIAFITPELEKEFLEMPTTIEELEAAI 822
+ + + KE+E + +D +R + +A + E F E TI +
Sbjct: 801 RE--YDEIKQSEAFKEIERQNEAYTDEERSRLADLAQVYVE-NGTFTE--ATIRSKIDLL 855
Query: 823 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL 882
+D +S + ++ + + + + I+ T + E +R I ++E++ L
Sbjct: 856 EDELSLLTTA---DRGSIDALKQKLQDIQLAETNLPLLQTEKERLDTRIKGIQEEYEGEL 912
Query: 883 RNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSG 942
+LV +I+ F++ F ++A G V L + E F + + I VKFRQ +L+VL QSG
Sbjct: 913 TSLVNKISLAFNKRFTKVASDGRVQLAKSER-FKDWKLQILVKFRQESELKVLDHQSQSG 971
Query: 943 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLT 1002
GER+VSTI +++SLQ LT+ PFR+VDEINQGMDP NE+ + LV A Q + Q FL+T
Sbjct: 972 GERAVSTIFFIMSLQGLTDAPFRIVDEINQGMDPKNEQMAHRYLVHTACQNSKSQYFLVT 1031
Query: 1003 PKLLPDLEYSEACSILNIMNGPWI 1026
PKLL L Y + I GP+I
Sbjct: 1032 PKLLTGLYYHPDMVVHCIFTGPYI 1055
>UNIPROTKB|Q59UE8 [details] [associations]
symbol:SMC5 "Potential nuclear DNA repair complex SMC
ATPase" species:237561 "Candida albicans SC5314" [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036170 "filamentous growth
of a population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR027131 InterPro:IPR003395 CGD:CAL0001481 Pfam:PF02463
GO:GO:0005524 GO:GO:0007059 GO:GO:0071216 GO:GO:0036180
GO:GO:0003677 GO:GO:0009267 GO:GO:0030261 GO:GO:0036170
EMBL:AACQ01000131 EMBL:AACQ01000130 GO:GO:0009295 eggNOG:COG1196
PANTHER:PTHR19306:SF1 RefSeq:XP_713250.1 RefSeq:XP_713303.1
ProteinModelPortal:Q59UE8 STRING:Q59UE8 GeneID:3645087
GeneID:3645103 KEGG:cal:CaO19.2417 KEGG:cal:CaO19.9955
HOGENOM:HOG000247851 Uniprot:Q59UE8
Length = 1073
Score = 413 (150.4 bits), Expect = 8.1e-35, P = 8.1e-35
Identities = 215/932 (23%), Positives = 381/932 (40%)
Query: 7 KRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALA 66
KR KV + PG I ++ + NF T+ + LN++IGPNGSGKS+LV +I +
Sbjct: 11 KRRKVLE-PSKFRPGFIRKVRVWNFTTYSYTEFNLSPTLNMIIGPNGSGKSTLVASICIG 69
Query: 67 LGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKV 126
L G L+ R ++ + +K G+E ++I++ + I R+ T +S W N K
Sbjct: 70 LAGSINLIKRK-NLKSMIKTGQEKSSVEITIENYEGHSPIVIKREF-TAKESNWTVNNKR 127
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
+ ++ +I +FNIQ++NL FLPQ+RV EFA LSP KLL ETE+ +GD L + H L
Sbjct: 128 ATESKIKDIRTKFNIQLDNLCHFLPQERVAEFAGLSPEKLLMETERTLGDGHLLIMHEDL 187
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
+ K ++ + + +K L +L + E++ ++ + E+V++ + +P+ KY
Sbjct: 188 IAKDNESQQLGNKIKDIEGRLAKLHEDRSKLEEEARKLEEYDRKSEEVDNHRLLIPYAKY 247
Query: 247 -DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGK--KQEKAILDGDCK------K 297
D+K T KP+E EK+I + K
Sbjct: 248 QDLKNQR-----THLKRLRDEAKHKLRTFQANFKPLENDIANAEKSINEESEKYSHLKDS 302
Query: 298 LSSLINENSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXX 357
L S +NE ++ + ++V K I K
Sbjct: 303 LKSTLNEINQHKST-QKQVTTEISELRANLKSYQTRAEQKKKELEEIKKEIAELQEKQRG 361
Query: 358 XQTVPAYEPPHDKIEKLGS--QILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD 415
V E + E ++ +L Q + Q+S+ + L LR RL
Sbjct: 362 LPQVDPEEMQNLSTESTSKRHELRDLEEQFQEVNSQRSDIGRELTHLTEQLRGAEKRLST 421
Query: 416 MEDKNNKLLHALRNSGAENIF--EAYCWLQQHRHELNKEA-Y--GPVLLEVNVSNRAHAN 470
+DK + L+ R +G EA+ ++ R+E E Y PV+ NV + +A
Sbjct: 422 -KDKLDMLVSDARQNGRSYRLRDEAFDVHKRLRNEPEYEGRYFEAPVI-SCNVPDINYAA 479
Query: 471 YLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI-LNYVSNESSRKEPFQISEEMRAL 529
E + + +F + D DFL+K + + L V++ + + ++R
Sbjct: 480 AAEKIIDNNTLFAFTVTNQSDFDFLSKFSQQTNTNTPLRMVNSVVNPTHEYS-KHQLREF 538
Query: 530 GISARLDQVFDAPHAVKEVLISQFGLDSSYIG----SKETDQKADNVA---KLGILDFWT 582
G L P V +L S + + + S E ++ NV+ +L F
Sbjct: 539 GFEGYLSDYIVGPKEVLSMLYSTSKIHTIPVSKHQLSSEQVRRLTNVSGNDRLPFTKFVA 598
Query: 583 PENHYRWSISRYGGHVSASV-EPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXX 641
+ Y S+YG + + E + +S+ V G
Sbjct: 599 GDTLYNIQRSKYGSQQAFYITEKIGRSQYF--GVQGLSQEAKDAINAEISKFKEKIEQKK 656
Query: 642 XXMQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES-IEKEDDIN 700
+ + I+ +L + + I +I KRK+ E++ I+ R +L++ IE + +
Sbjct: 657 RAYEGHRNNIDSFNERLTEIKHYIHDI----KRKQSELQE-ISKRAGQLQTKIELKKERE 711
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
L K + I+ F+ I+ K L + S + + E K+++LE
Sbjct: 712 QKLEKDSKRDYSSKIRMFEQKIDEKYLASGELFASLSNSVLELCEKENQMKLKKLEIIGY 771
Query: 761 QHEKLALQASL-----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 815
+++KL ++ L E K + ++ + K Q+E AF E+E++ E T
Sbjct: 772 KNKKLTAESLLDELGARQEKLKNDYNRYKREYDEIK-QSE--AF--KEIERQN-EAYTDE 825
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
E A + N F I + + + ++ L+T LK+ L +I L
Sbjct: 826 ERSRLADLAQVYVENGTF-TEATIRSKIDLLEDELSLLTTADRGSIDALKQKLQDIQ-LA 883
Query: 876 EKWLPTLRNLVAQINETFSRNFQEMAVAGEVS 907
E LP L+ ++ +T + QE GE++
Sbjct: 884 ETNLPLLQTEKERL-DTRIKGIQE-EYEGELT 913
Score = 353 (129.3 bits), Expect = 2.6e-28, P = 2.6e-28
Identities = 114/384 (29%), Positives = 194/384 (50%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQ-IEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
Q+E + I A +LQ + E Q +EK +R+ + I + ++K++ EK
Sbjct: 687 QSELQEISKRAGQLQTKIELKKEREQKLEKDSKRDYSSKIRMFEQKID--EKYLASGELF 744
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
A L + +L ++ + +++K L EI+ K E A+ +L+ + +++
Sbjct: 745 ASLSNSVLELCEKENQ--MKLKKL--EIIGYKNKKLTAESLLDELGARQEKLKNDYNRYK 800
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKR-QAESIAFITPELEKEFLEMPTTIEELEAAI 822
+ + + KE+E + +D +R + +A + E F E TI +
Sbjct: 801 RE--YDEIKQSEAFKEIERQNEAYTDEERSRLADLAQVYVE-NGTFTE--ATIRSKIDLL 855
Query: 823 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL 882
+D +S + ++ + + + + I+ T + E +R I ++E++ L
Sbjct: 856 EDELSLLTTA---DRGSIDALKQKLQDIQLAETNLPLLQTEKERLDTRIKGIQEEYEGEL 912
Query: 883 RNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSG 942
+LV +I+ F++ F ++A G V L + E F + + I VKFRQ +L+VL QSG
Sbjct: 913 TSLVNKISLAFNKRFTKVASDGRVQLAKSER-FKDWKLQILVKFRQESELKVLDHQSQSG 971
Query: 943 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLT 1002
GER+VSTI +++SLQ LT+ PFR+VDEINQGMDP NE+ + LV A Q + Q FL+T
Sbjct: 972 GERAVSTIFFIMSLQGLTDAPFRIVDEINQGMDPKNEQMAHRYLVHTACQNSKSQYFLVT 1031
Query: 1003 PKLLPDLEYSEACSILNIMNGPWI 1026
PKLL L Y + I GP+I
Sbjct: 1032 PKLLTGLYYHPDMVVHCIFTGPYI 1055
>UNIPROTKB|Q6P9I7 [details] [associations]
symbol:smc6 "Structural maintenance of chromosomes protein
6" species:8355 "Xenopus laevis" [GO:0000722 "telomere maintenance
via recombination" evidence=ISS] [GO:0000781 "chromosome, telomeric
region" evidence=ISS] [GO:0016605 "PML body" evidence=ISS]
[GO:0030915 "Smc5-Smc6 complex" evidence=ISS] [GO:0090398 "cellular
senescence" evidence=ISS] InterPro:IPR010935 InterPro:IPR027132
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0016605
GO:GO:0006281 HSSP:P58301 GO:GO:0000781 GO:GO:0000722 GO:GO:0090398
SUPFAM:SSF75553 GO:GO:0030915 PANTHER:PTHR19306:SF2 CTD:79677
HOVERGEN:HBG093964 EMBL:AB103031 EMBL:BC060747
RefSeq:NP_001083550.1 UniGene:Xl.23516 ProteinModelPortal:Q6P9I7
IntAct:Q6P9I7 GeneID:398986 KEGG:xla:398986 Xenbase:XB-GENE-6071335
Uniprot:Q6P9I7
Length = 1128
Score = 213 (80.0 bits), Expect = 4.1e-29, Sum P(3) = 4.1e-29
Identities = 98/403 (24%), Positives = 185/403 (45%)
Query: 646 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKR--KLESIEKEDDINTA 702
++ + A + K+ +E I++ +++++ + L +R +LE++E++ I+
Sbjct: 718 SQMATFQQRAQSVDKDIKENEGILRQYHNSKKQIQIDLRPLLERISELENVEEQPSID-- 775
Query: 703 LAKLVDQAAD-LN-IQQFKYAIEIK-----NLLVEIVSCKWSYAE--KHMASI-EFDAKI 752
+A L +A + LN I+ K +E+ NL + + + +Y E K ++S+ E +
Sbjct: 776 IATLEGEAEENLNKIELVKQEVELAKEKMGNLKSFLTTAEINYEEIKKKISSVAEVAEPV 835
Query: 753 RELEFNLKQHEKLALQASLHYEDCKKE-VEHCRKHLSD--AKRQAESIAFITPE-LEKEF 808
+E + Q + + HYE+ KE ++ +K + AK Q + + + E
Sbjct: 836 KEDLHRVDQEVENCKRHRKHYEEKLKEHLDRIQKRKEEVAAKEQELEVKISQAKCICPER 895
Query: 809 LEMPTTIEELEAAIQDNISQANSIFFLNQN---ILQEYEHRQRQIEDLSTKQEADKKELK 865
+E+ T L+ I + NS L+ N I+++Y + + +D+ E K LK
Sbjct: 896 IEVSRTARSLDTEINRLREKINSEEVLHGNREEIIKQYHEAKERYQDV----EGKVKHLK 951
Query: 866 RF---LAEIDALKEKWLPTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 921
RF L EI A + K R L + F + A +G+++ D H+++ +
Sbjct: 952 RFIKLLDEIMAQRYKSYQQFRRCLTFRCKIYFDSLLSQRAYSGKINFD-HKNET----LS 1006
Query: 922 IKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERK 981
I V+ + + + SGGERS ST+ +++SL + PFR +DE + MD +N R
Sbjct: 1007 ITVQPGEGNKAALSDMKCLSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRI 1066
Query: 982 MFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1024
++ A Q LLTP+ + L + IL M P
Sbjct: 1067 SMDMMLSMADSQRFRQFILLTPQNMSSLPSTSLVRILR-MKDP 1108
Score = 210 (79.0 bits), Expect = 4.1e-29, Sum P(3) = 4.1e-29
Identities = 72/252 (28%), Positives = 121/252 (48%)
Query: 10 KVSRGEDDYMPGNIIE-IELHNFMTFDHLICKP---GSRLNLVIGPNGSGKSSLVCAIAL 65
+VS + IIE I L NFM H + P G +N VIG NGSGKS+++ A+ +
Sbjct: 73 RVSASQSGTGDVGIIESIFLRNFMC--HSMLGPFRFGPNVNFVIGNNGSGKSAVLTALIV 130
Query: 66 ALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEH--------LTIMRKIDTRNK 117
LGG + R +SI +VK G+ I I+LR ++ + +T+ +++ T
Sbjct: 131 GLGGKAAITNRGSSIKGFVKEGQTFAEISITLRNRGQDAYKPDVFGNSITVQQRLTTDGS 190
Query: 118 SEWFFN---GKVVP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEETE 171
+ G VV K E+ I FNIQV+N L Q+ F + + +
Sbjct: 191 RTYKLKSATGAVVSNKKEELTAILDHFNIQVDNPVSVLTQEMSKHFLQSKNESDKYKFFM 250
Query: 172 KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELL 231
KA Q+ + ++E +K +T + V+ G+ L L+ +++E+ + + E+
Sbjct: 251 KATQLEQMKEDYSYIME--TKSRTHD-QVENGGERLRDLRQECIQKEERFKSIASLGEMK 307
Query: 232 EKVESMKKKLPW 243
EK+E +K K+ W
Sbjct: 308 EKLEDLKNKMAW 319
Score = 70 (29.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 39/187 (20%), Positives = 73/187 (39%)
Query: 692 SIEKEDDINTALAKLVDQAADLNIQQF---KYAIEIKNLLVEIVSCKWSYAEKHMASIEF 748
+++ E I K+++ +Q K E L + + K +K + E
Sbjct: 343 TVKYEQKIEECQGKVINAEEKFRAKQEELDKITQEAVALKPQGIGLKEDVQKKRKSYNES 402
Query: 749 DAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAK-RQAESIAFITPELEKE 807
+ LK+ E+ A Q E+ KK ++ + A+ ++ I L +
Sbjct: 403 EVLYNRHRMELKRLERDAEQLHKRIEELKKSADNDSESEKMARQKEINQIRERMKALHDK 462
Query: 808 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 867
+ I + + AI+ + I +NI Q E +RQ+++L E+ LKRF
Sbjct: 463 DITTNQQIHQFQQAIEKYKEERARIGNEERNIKQRLEQHKRQLKEL---HESKTDRLKRF 519
Query: 868 LAEIDAL 874
+ AL
Sbjct: 520 GQNMPAL 526
Score = 63 (27.2 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 26/120 (21%), Positives = 51/120 (42%)
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK-VESMKKKLPWLKYDMKKAEY--IXX 256
V++ + N+ + L +++R+ + AE L K +E +KK K A I
Sbjct: 392 VQKKRKSYNESEVLYNRHRMELKRLERDAEQLHKRIEELKKSADNDSESEKMARQKEINQ 451
Query: 257 XXXXXXXXXXXXXXXNT-LHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEK 315
N +H+F + IE K+E+A + + + + + E KR++ L +
Sbjct: 452 IRERMKALHDKDITTNQQIHQFQQAIEKYKEERARIGNEERNIKQRL-EQHKRQLKELHE 510
Score = 59 (25.8 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 36/155 (23%), Positives = 71/155 (45%)
Query: 768 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 827
+A+L D + E+ H K L + Q + ++K+ E + + + + I
Sbjct: 694 RATLLSRDVEAEISHLEKELRNFGSQMATFQQRAQSVDKDIKENEGILRQYHNS-KKQI- 751
Query: 828 QANSIFFLNQNILQEYEHRQRQIE-DLSTKQ-EADKK--ELKRFLAEIDALKEKWLPTLR 883
Q + L + + E E+ + Q D++T + EA++ +++ E++ KEK + L+
Sbjct: 752 QIDLRPLLER--ISELENVEEQPSIDIATLEGEAEENLNKIELVKQEVELAKEK-MGNLK 808
Query: 884 NLV--AQIN-ETFSRNFQEMA-VAGEVSLDEHESD 914
+ + A+IN E + +A VA V D H D
Sbjct: 809 SFLTTAEINYEEIKKKISSVAEVAEPVKEDLHRVD 843
Score = 53 (23.7 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 14/52 (26%), Positives = 31/52 (59%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 419
HD++E G ++ +L Q+ +QK E+ K + +L + ++L+D+++K
Sbjct: 273 HDQVENGGERLRDL----RQECIQKEERFKSI----ASLGEMKEKLEDLKNK 316
Score = 50 (22.7 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 27/146 (18%), Positives = 67/146 (45%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTAL 703
Q E I EA L+ + + VQ +++ E E N + +L+ +E++ + ++ +
Sbjct: 368 QEELDKITQEAVALKPQGIGLKEDVQKKRKSYNESEVLYNRHRMELKRLERDAEQLHKRI 427
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
+L ++AD + + K A + K EI + H I + +I + + +++++
Sbjct: 428 EEL-KKSADNDSESEKMARQ-K----EINQIRERMKALHDKDITTNQQIHQFQQAIEKYK 481
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSD 789
+ + + K+ +E ++ L +
Sbjct: 482 EERARIGNEERNIKQRLEQHKRQLKE 507
Score = 47 (21.6 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 646 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN----LRKRKLESIEKEDDINT 701
T Q++ + + A ++K +EE I E+ ++ +E H L + K + +++
Sbjct: 466 TNQQIHQFQQA-IEKYKEERARIGNEERNIKQRLEQHKRQLKELHESKTDRLKRFGQNMP 524
Query: 702 ALAKLVDQAADL 713
AL +D+A L
Sbjct: 525 ALLAAIDEADKL 536
Score = 45 (20.9 bits), Expect = 4.1e-29, Sum P(3) = 4.1e-29
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 374 LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
L Q + L +KR +E E + N++++ L+ RL+ ++ +K + L+ S A+
Sbjct: 381 LKPQGIGLKEDVQKKRKSYNESEVLYNRHRMELK----RLERDAEQLHKRIEELKKS-AD 435
Query: 434 NIFEAYCWLQQHRHELNK 451
N E+ +Q E+N+
Sbjct: 436 NDSESEKMARQK--EINQ 451
Score = 45 (20.9 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 370 KIEKLGSQILELGVQAN--QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
+I L ++ G Q Q+R Q +K+ + +N+ LRQ + K ++ LL
Sbjct: 705 EISHLEKELRNFGSQMATFQQRAQSVDKD--IKENEGILRQYHNSKKQIQIDLRPLLE-- 760
Query: 428 RNSGAENIFE 437
R S EN+ E
Sbjct: 761 RISELENVEE 770
>UNIPROTKB|Q96SB8 [details] [associations]
symbol:SMC6 "Structural maintenance of chromosomes protein
6" species:9606 "Homo sapiens" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030915 "Smc5-Smc6 complex"
evidence=IDA] [GO:0000722 "telomere maintenance via recombination"
evidence=IMP] [GO:0000781 "chromosome, telomeric region"
evidence=IDA] [GO:0090398 "cellular senescence" evidence=IMP]
[GO:0016605 "PML body" evidence=IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR027132 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
EMBL:CH471053 GO:GO:0016605 GO:GO:0006281 HSSP:P58301 GO:GO:0000781
GO:GO:0000722 GO:GO:0090398 eggNOG:COG1196 GO:GO:0030915
PANTHER:PTHR19306:SF2 EMBL:AJ310551 EMBL:AL136544 EMBL:AK025769
EMBL:AK292421 EMBL:AL832979 EMBL:AC097377 EMBL:BC032675
EMBL:BC039828 IPI:IPI00154528 IPI:IPI00816217 RefSeq:NP_001135758.1
RefSeq:NP_078900.1 UniGene:Hs.526728 ProteinModelPortal:Q96SB8
SMR:Q96SB8 DIP:DIP-34562N IntAct:Q96SB8 STRING:Q96SB8
PhosphoSite:Q96SB8 DMDM:122070455 PaxDb:Q96SB8 PRIDE:Q96SB8
DNASU:79677 Ensembl:ENST00000351948 Ensembl:ENST00000381272
Ensembl:ENST00000402989 Ensembl:ENST00000448223 GeneID:79677
KEGG:hsa:79677 UCSC:uc002rcn.3 UCSC:uc002rcp.1 CTD:79677
GeneCards:GC02M017845 HGNC:HGNC:20466 MIM:609387 neXtProt:NX_Q96SB8
PharmGKB:PA134892702 HOGENOM:HOG000286038 HOVERGEN:HBG093964
InParanoid:Q96SB8 OMA:LHYKELK OrthoDB:EOG44QT04 PhylomeDB:Q96SB8
ChiTaRS:SMC6 GenomeRNAi:79677 NextBio:68922 ArrayExpress:Q96SB8
Bgee:Q96SB8 CleanEx:HS_SMC6 Genevestigator:Q96SB8 Uniprot:Q96SB8
Length = 1091
Score = 216 (81.1 bits), Expect = 7.1e-29, Sum P(3) = 7.1e-29
Identities = 102/391 (26%), Positives = 171/391 (43%)
Query: 660 KEREEIINIVQIEKRKRREMENHINLRK-RKLESIEKEDDINTALAKLVDQAADLNIQQF 718
K EE++ Q+ K +M+ N+ + R+LE+IE+ ++ +A L D+A + N +
Sbjct: 697 KHNEELLKRCQLHY-KELKMKIRKNISEIRELENIEEHQSVD--IATLEDEAQE-NKSKM 752
Query: 719 KYAIEI----KNLLVEIVSCKWSYAEKHMASIEFDA-KIRELEFNLKQHEKLA------- 766
K E K + + S K AE +I+F ++ EL LK LA
Sbjct: 753 KMVEEHMEQQKENMEHLKSLKIE-AENKYDAIKFKINQLSELADPLKDELNLADSEVDNQ 811
Query: 767 LQASLHYEDC-----------KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 815
+ HYE+ K+E++ K L + QA I E+EK + I
Sbjct: 812 KRGKRHYEEKQKEHLDTLNKKKRELDMKEKELEEKMSQARQICPERIEVEKSASILDKEI 871
Query: 816 EELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
L IQ ++ S + + I+++Y+ + DL +K KK +K L EI
Sbjct: 872 NRLRQKIQAEHASHGD-----REEIMRQYQEARETYLDLDSKVRTLKKFIK-LLGEIMEH 925
Query: 875 KEKWLPTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLE 933
+ K R L + F + A G+++ D H+++ + I V+ + +
Sbjct: 926 RFKTYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFD-HKNET----LSISVQPGEGNKAA 980
Query: 934 VLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQP 993
SGGERS ST+ +++SL + PFR +DE + MD +N R +++ A
Sbjct: 981 FNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAMDLILKMADSQ 1040
Query: 994 NTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1024
Q LLTP+ + L S+ IL M+ P
Sbjct: 1041 RFRQFILLTPQSMSSLPSSKLIRILR-MSDP 1070
Score = 195 (73.7 bits), Expect = 7.1e-29, Sum P(3) = 7.1e-29
Identities = 73/240 (30%), Positives = 118/240 (49%)
Query: 23 IIE-IELHNFMTFDHL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
IIE I L NFM L K GS +N V+G NGSGKS+++ A+ + LGG R +S+
Sbjct: 47 IIESIHLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGRAVATNRGSSL 106
Query: 81 GAYVKRGEESGYIKISLR--GDTK------------EEHLTIMRKIDTRNKSEWFFNGKV 126
+VK G+ S I I+LR GD ++H++I + KS G V
Sbjct: 107 KGFVKDGQNSADISITLRNRGDDAFKASVYGNSILIQQHISIDGSRSYKLKSA---TGSV 163
Query: 127 VP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEETEKAVGDPQLPVQH 183
V K E++ I FNIQV+N L Q+ +F + + + KA Q+ +
Sbjct: 164 VSTRKEELIAILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDY 223
Query: 184 CALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPW 243
++E +K +T E + + + L +LK VE+E+ + + + + +ES+K ++ W
Sbjct: 224 SYIME--TKERTKE-QIHQGEERLTELKRQCVEKEERFQSIAGLSTMKTNLESLKHEMAW 280
Score = 85 (35.0 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 31/125 (24%), Positives = 60/125 (48%)
Query: 755 LEFNLKQHEKLALQASLHYEDCK----KEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 810
LE ++K +E+L + LHY++ K K + R+ + + Q+ IA + E ++ +
Sbjct: 692 LEKDIKHNEELLKRCQLHYKELKMKIRKNISEIRELENIEEHQSVDIATLEDEAQENKSK 751
Query: 811 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 870
M E +E ++N+ S+ +N +Y+ + +I LS + K EL +E
Sbjct: 752 MKMVEEHMEQQ-KENMEHLKSLKIEAEN---KYDAIKFKINQLSELADPLKDELNLADSE 807
Query: 871 IDALK 875
+D K
Sbjct: 808 VDNQK 812
Score = 81 (33.6 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 49/225 (21%), Positives = 104/225 (46%)
Query: 657 KLQKEREEIINIVQIEKRKRREMENHINLRKRKL-ESIEKEDDINTALAKLVDQAADLNI 715
+++K+ I + ++I + + ++ + ++ +L E+ +K DI L K+ ++ N
Sbjct: 285 EIEKQLNAIRDNIKIGEDRAARLDRKMEEQQVRLNEAEQKYKDIQDKLEKISEET---NA 341
Query: 716 QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYED 775
+ A E L ++V+ K +Y E A + ++ + E + K E+L + E+
Sbjct: 342 R----APECMALKADVVAKKRAYNE---AEVLYNRSLNEYKALKKDDEQLCKRI----EE 390
Query: 776 CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT----IEELEAAIQDNISQANS 831
KK + + +RQ + I+++ E K F + IE+ + AI+ + +
Sbjct: 391 LKKSTDQSLEP-ERLERQ-KKISWLK-ERVKAFQNQENSVNQEIEQFQQAIEKDKEEHGK 447
Query: 832 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
I ++ + QRQ+++L + D+ LKRF + AL E
Sbjct: 448 IKREELDVKHALSYNQRQLKELKDSK-TDR--LKRFGPNVPALLE 489
Score = 69 (29.3 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 39/178 (21%), Positives = 82/178 (46%)
Query: 654 EAAKLQKEREEIINIVQ-IEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAAD 712
+ A L+ E +E + ++ +E+ ++ EN +L+ K+E+ K D I + +L + A
Sbjct: 737 DIATLEDEAQENKSKMKMVEEHMEQQKENMEHLKSLKIEAENKYDAIKFKINQLSELADP 796
Query: 713 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQ-HEKLALQAS 770
L + E+ N K Y EK ++ + K REL+ K+ EK++
Sbjct: 797 LKDELNLADSEVDNQK----RGKRHYEEKQKEHLDTLNKKKRELDMKEKELEEKMSQARQ 852
Query: 771 LHYE--DCKKEVEHCRKHLSDAKR--QAESIAF-ITPELEKEFLEMPTTIEELEAAIQ 823
+ E + +K K ++ ++ QAE + E+ +++ E T +L++ ++
Sbjct: 853 ICPERIEVEKSASILDKEINRLRQKIQAEHASHGDREEIMRQYQEARETYLDLDSKVR 910
Score = 60 (26.2 bits), Expect = 5.4e-15, Sum P(3) = 5.4e-15
Identities = 24/90 (26%), Positives = 40/90 (44%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE---KDV 221
K+ EET P+ +V K E R+ LN+ KAL + E K +
Sbjct: 334 KISEETNARA--PECMALKADVVAKKRAYNEAEVLYNRS---LNEYKALKKDDEQLCKRI 388
Query: 222 ERVRQRAELLEKVESMK--KKLPWLKYDMK 249
E +++ + + E ++ KK+ WLK +K
Sbjct: 389 EELKKSTDQSLEPERLERQKKISWLKERVK 418
Score = 55 (24.4 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 32/153 (20%), Positives = 65/153 (42%)
Query: 775 DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFF 834
D + EVE+ + + ++ ++ E+ +EL+ I+ NIS+ +
Sbjct: 670 DLENEVENKTAQILNLQQHLSALEKDIKHNEELLKRCQLHYKELKMKIRKNISEIREL-- 727
Query: 835 LNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFS 894
+NI E EH+ I L + + +K ++K ++ KE + L++L + +
Sbjct: 728 --ENI--E-EHQSVDIATLEDEAQENKSKMKMVEEHMEQQKEN-MEHLKSLKIEAENKYD 781
Query: 895 ------RNFQEMA--VAGEVSLDEHESDFDKFG 919
E+A + E++L + E D K G
Sbjct: 782 AIKFKINQLSELADPLKDELNLADSEVDNQKRG 814
Score = 54 (24.1 bits), Expect = 7.1e-29, Sum P(3) = 7.1e-29
Identities = 20/69 (28%), Positives = 35/69 (50%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
+++E +QIL L Q+ L EK+ + N+ L++C K+++ K K + +R
Sbjct: 673 NEVENKTAQILNL-----QQHLSALEKD--IKHNEELLKRCQLHYKELKMKIRKNISEIR 725
Query: 429 NSGAENIFE 437
ENI E
Sbjct: 726 E--LENIEE 732
Score = 53 (23.7 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 29/151 (19%), Positives = 62/151 (41%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES-IEKEDDINTALAKLVDQ 709
+E A+ L KE + +Q E + E + + E+ ++ + + T L K +
Sbjct: 860 VEKSASILDKEINRLRQKIQAEHASHGDREEIMRQYQEARETYLDLDSKVRT-LKKFIKL 918
Query: 710 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 769
++ +FK + + L + CK Y + ++ + K + F+ H+ L
Sbjct: 919 LGEIMEHRFKTYQQFRRCLT--LRCKL-YFDNLLSQRAYCGK---MNFD---HKNETLSI 969
Query: 770 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFI 800
S+ + K + + LS +R ++ FI
Sbjct: 970 SVQPGEGNKAAFNDMRALSGGERSFSTVCFI 1000
Score = 47 (21.6 bits), Expect = 3.7e-28, Sum P(3) = 3.7e-28
Identities = 11/55 (20%), Positives = 31/55 (56%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
++IEK + I + ++ + R + +++ + + ++ L + + KD++DK K+
Sbjct: 284 NEIEKQLNAIRD-NIKIGEDRAARLDRK--MEEQQVRLNEAEQKYKDIQDKLEKI 335
Score = 45 (20.9 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 24/104 (23%), Positives = 50/104 (48%)
Query: 777 KKEVEHCRKHLSDAKRQAESIAFITPELEK-EFL--EMPTTIEELEAAIQDNISQANSIF 833
+K ++CR+ + Q + + + E + +FL ++ + I +LE +++ +Q I
Sbjct: 627 QKPPKNCREAFTADGDQVFAGRYYSSENTRPKFLSRDVDSEISDLENEVENKTAQ---IL 683
Query: 834 FLNQNILQEYEHRQRQIEDLSTKQEADKKELK-RFLAEIDALKE 876
L Q+ L E + E+L + + KELK + I ++E
Sbjct: 684 NLQQH-LSALEKDIKHNEELLKRCQLHYKELKMKIRKNISEIRE 726
Score = 39 (18.8 bits), Expect = 2.5e-27, Sum P(3) = 2.5e-27
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 652 EDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKE 696
ED AA+L ++ EE + + + E+ K +++++ KLE I +E
Sbjct: 301 EDRAARLDRKMEEQQVRLNEAEQ-KYKDIQD-------KLEKISEE 338
>RGD|1311214 [details] [associations]
symbol:Smc6 "structural maintenance of chromosomes 6"
species:10116 "Rattus norvegicus" [GO:0000722 "telomere maintenance
via recombination" evidence=IEA;ISO] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA;ISO]
[GO:0005622 "intracellular" evidence=ISO] [GO:0016605 "PML body"
evidence=IEA;ISO] [GO:0030915 "Smc5-Smc6 complex" evidence=IEA;ISO]
[GO:0090398 "cellular senescence" evidence=IEA;ISO]
InterPro:IPR027132 InterPro:IPR003395 Pfam:PF02463 RGD:1311214
GO:GO:0016605 GO:GO:0000781 GO:GO:0000722 GO:GO:0090398
EMBL:CH473947 GO:GO:0030915 PANTHER:PTHR19306:SF2 CTD:79677
OMA:LHYKELK OrthoDB:EOG44QT04 GeneTree:ENSGT00550000074816
IPI:IPI00360352 RefSeq:NP_001101484.1 UniGene:Rn.7047
Ensembl:ENSRNOT00000007073 GeneID:313961 KEGG:rno:313961
NextBio:667052 Uniprot:D4AB26
Length = 1097
Score = 215 (80.7 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 96/388 (24%), Positives = 170/388 (43%)
Query: 660 KEREEIINIVQIEKRKRREMENHINLRK-RKLESIEKEDDINTALA-------KLVDQAA 711
K EE++ Q+ K +M+ N+ + R+LE+IE+ ++ A K+ Q
Sbjct: 703 KRNEELLKRCQLHY-KEIKMKIRKNISEIRELENIEEHQSVDIATLEDEAEENKIKMQMV 761
Query: 712 DLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE-KLALQA 769
+ N++Q K +E +K L +E + K+ + + + A + E NL E +
Sbjct: 762 EKNMEQQKENMENLKTLKIEAEN-KYDTIKLKINQLSELADPLKDELNLADSEVDSQKRG 820
Query: 770 SLHYEDCKKE-----------VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
HYED +KE ++ K L + QA I E++K + I L
Sbjct: 821 KQHYEDKQKEHMDTLNKKRRELDMKEKELQEKMSQARQICPERIEVKKSASILDKEINRL 880
Query: 819 EAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
IQ ++ S + + I+++Y+ + DL +K ++ +K L EI + K
Sbjct: 881 RQKIQAEHASHGD-----REEIMKQYQEARETYLDLDSKVRTLRRFIK-LLEEIMTHRYK 934
Query: 878 WLPTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLS 936
R L + F + A G+++ D H+++ + I V+ + +
Sbjct: 935 TYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFD-HKNET----LSISVQPGEGNKASFND 989
Query: 937 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 996
SGGERS ST+ +++SL + PFR +DE + MD +N R +++ A
Sbjct: 990 MRALSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAMDMILKMADSQRFR 1049
Query: 997 QCFLLTPKLLPDLEYSEACSILNIMNGP 1024
Q LLTP+ + L S+ IL M+ P
Sbjct: 1050 QFILLTPQSMSSLPSSKLIRILR-MSDP 1076
Score = 198 (74.8 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 71/240 (29%), Positives = 120/240 (50%)
Query: 23 IIE-IELHNFMTFDHL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
IIE I+L NFM L K GS +N V+G NGSGKS+++ A+ + LGG R +S+
Sbjct: 53 IIESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSL 112
Query: 81 GAYVKRGEESGYIKISLR------------GDT--KEEHLTIMRKIDTRNKSEWFFNGKV 126
+VK G+ S I I+LR GD+ ++H+++ + KSE G V
Sbjct: 113 KGFVKAGQNSADISITLRNRGDDAFRANVYGDSIVVQQHISVDGSRSYKLKSE---KGTV 169
Query: 127 VP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEETEKAVGDPQLPVQH 183
V K E++ I FNIQV+N L Q+ +F + + + KA Q+ +
Sbjct: 170 VSTRKEELIAILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDY 229
Query: 184 CALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPW 243
++E +K +T E + + + L +LK +E+E+ + + + + +E +K ++ W
Sbjct: 230 SYIME--TKERTKE-QINQGEERLTELKRQCLEKEERFQNIAGLSTMKTNLEYLKHEMAW 286
Score = 95 (38.5 bits), Expect = 2.0e-15, Sum P(4) = 2.0e-15
Identities = 37/157 (23%), Positives = 78/157 (49%)
Query: 723 EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK----K 778
EI +L EI + K H+ +++ ++ LE ++K++E+L + LHY++ K K
Sbjct: 673 EISDLETEIENKKG-----HIMNLQH--RLSALEKDIKRNEELLKRCQLHYKEIKMKIRK 725
Query: 779 EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQN 838
+ R+ + + Q+ IA + E E+ ++M + +E ++N+ ++ +N
Sbjct: 726 NISEIRELENIEEHQSVDIATLEDEAEENKIKMQMVEKNMEQQ-KENMENLKTLKIEAEN 784
Query: 839 ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
+Y+ + +I LS + K EL +E+D+ K
Sbjct: 785 ---KYDTIKLKINQLSELADPLKDELNLADSEVDSQK 818
Score = 89 (36.4 bits), Expect = 8.1e-15, Sum P(4) = 8.1e-15
Identities = 44/179 (24%), Positives = 83/179 (46%)
Query: 654 EAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAAD 712
+ A L+ E EE I + +EK ++ EN NL+ K+E+ K D I + +L + A
Sbjct: 743 DIATLEDEAEENKIKMQMVEKNMEQQKENMENLKTLKIEAENKYDTIKLKINQLSELADP 802
Query: 713 LNIQQFKYAIEIKNLLVEIVSC-KWSYAEKHMASIE-FDAKIRELEFNLKQ-HEKLALQA 769
L K + + + V+ K Y +K ++ + K REL+ K+ EK++
Sbjct: 803 L-----KDELNLADSEVDSQKRGKQHYEDKQKEHMDTLNKKRRELDMKEKELQEKMSQAR 857
Query: 770 SLHYE--DCKKEVEHCRKHLSDAKR--QAESIAF-ITPELEKEFLEMPTTIEELEAAIQ 823
+ E + KK K ++ ++ QAE + E+ K++ E T +L++ ++
Sbjct: 858 QICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIMKQYQEARETYLDLDSKVR 916
Score = 68 (29.0 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 38/167 (22%), Positives = 70/167 (41%)
Query: 747 EFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEK 806
E + ++ + N+K E+ A + E+ + + K D + + E I+ T
Sbjct: 291 EIEKQLNAIRDNIKIGEERAAKLDRKMEEQQVRLNDAEKKYKDIQDKLEKISEETNARAP 350
Query: 807 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDL--STKQEADKKEL 864
E + + T + A D N + + ++ E ++IE+L ST Q + + L
Sbjct: 351 ECMALKTDVIARTRAFNDAEVLYNRSLNEYKALKKDGEQLCKRIEELKKSTDQSLEPERL 410
Query: 865 KRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEH 911
+R I LKEK ++ L Q N T ++ ++ A E EH
Sbjct: 411 ER-QKRICWLKEK----VKALQDQEN-TVNQEVEQFEQAIEKDKQEH 451
Score = 68 (29.0 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 48/243 (19%), Positives = 110/243 (45%)
Query: 644 MQTEQRLIEDEAA-----KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-D 697
M+T ++ E A +++K+ I + ++I + + +++ + ++ +L EK+
Sbjct: 273 MKTNLEYLKHEMAWAVVNEIEKQLNAIRDNIKIGEERAAKLDRKMEEQQVRLNDAEKKYK 332
Query: 698 DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
DI L K+ ++ N + A E L ++++ ++ + A + ++ + E +
Sbjct: 333 DIQDKLEKISEET---NAR----APECMALKTDVIARTRAFND---AEVLYNRSLNEYKA 382
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI-- 815
K E+L + E+ KK + + +RQ + I ++ ++ K + T+
Sbjct: 383 LKKDGEQLCKRI----EELKKSTDQSLEP-ERLERQ-KRICWLKEKV-KALQDQENTVNQ 435
Query: 816 --EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 873
E+ E AI+ + + I + + + QRQ+++L + D+ LKRF + A
Sbjct: 436 EVEQFEQAIEKDKQEHVRIKREDVEVRHTLSYNQRQLKELKDSK-TDR--LKRFGPHVPA 492
Query: 874 LKE 876
L E
Sbjct: 493 LLE 495
Score = 51 (23.0 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE---KDV 221
K+ EET P+ ++ ++ E R+ LN+ KAL + E K +
Sbjct: 340 KISEETNARA--PECMALKTDVIARTRAFNDAEVLYNRS---LNEYKALKKDGEQLCKRI 394
Query: 222 ERVRQRAELLEKVESMK--KKLPWLKYDMK 249
E +++ + + E ++ K++ WLK +K
Sbjct: 395 EELKKSTDQSLEPERLERQKRICWLKEKVK 424
Score = 50 (22.7 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 387 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFE 437
Q RL EK+ + +N+ L++C K+++ K K + +R ENI E
Sbjct: 692 QHRLSALEKD--IKRNEELLKRCQLHYKEIKMKIRKNISEIRE--LENIEE 738
Score = 50 (22.7 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 17/81 (20%), Positives = 41/81 (50%)
Query: 163 PVKLLEETEKAVGDPQLPVQHCA--LVEKSSKLKTIECTVKRNGDTLN--QL--KALNVE 216
P L + + + D + +++ ++ +L +E +KRN + L QL K + ++
Sbjct: 663 PKFLSRDVDSEISDLETEIENKKGHIMNLQHRLSALEKDIKRNEELLKRCQLHYKEIKMK 722
Query: 217 QEKDVERVRQRAELLEKVESM 237
K++ +R+ E +E+ +S+
Sbjct: 723 IRKNISEIRE-LENIEEHQSV 742
Score = 49 (22.3 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 12/55 (21%), Positives = 31/55 (56%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
++IEK + I + ++ ++R K +++ + + ++ L + KD++DK K+
Sbjct: 290 NEIEKQLNAIRD-NIKIGEERAAKLDRK--MEEQQVRLNDAEKKYKDIQDKLEKI 341
Score = 45 (20.9 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 386 NQKRLQKSEKEKILNQNKLTLRQ-CSDRLK 414
N+KR + KEK L + RQ C +R++
Sbjct: 836 NKKRRELDMKEKELQEKMSQARQICPERIE 865
Score = 42 (19.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 23/97 (23%), Positives = 52/97 (53%)
Query: 370 KIEKLGSQILEL-GVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
KI K S+I EL ++ +Q + + E +NK+ + Q ++ + + +N + L L+
Sbjct: 722 KIRKNISEIRELENIEEHQS-VDIATLEDEAEENKIKM-QMVEKNMEQQKENMENLKTLK 779
Query: 429 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 465
AEN ++ ++ ++L++ A P+ E+N+++
Sbjct: 780 IE-AENKYDT---IKLKINQLSELA-DPLKDELNLAD 811
Score = 37 (18.1 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 591 ISRYGGHVSASVEPVNQS 608
+ R+G HV A +E ++ +
Sbjct: 483 LKRFGPHVPALLEAIDDA 500
>UNIPROTKB|E1BFH7 [details] [associations]
symbol:SMC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090398 "cellular senescence" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] InterPro:IPR027132
GO:GO:0016605 GO:GO:0000781 GO:GO:0000722 GO:GO:0090398
GO:GO:0030915 PANTHER:PTHR19306:SF2 OMA:LHYKELK
GeneTree:ENSGT00550000074816 EMBL:DAAA02031803 IPI:IPI00699225
PRIDE:E1BFH7 Ensembl:ENSBTAT00000024303 Uniprot:E1BFH7
Length = 1101
Score = 229 (85.7 bits), Expect = 9.0e-28, Sum P(4) = 9.0e-28
Identities = 94/397 (23%), Positives = 185/397 (46%)
Query: 651 IEDEAAKLQKE---REEIINIVQIEKRKRREMENHINLRK-RKLESIEKEDDINTALAKL 706
++ + LQK+ EE++ Q+ ++ ++M+ ++ + R+LE+IE+ ++ +A L
Sbjct: 694 LQQHLSTLQKDIKCNEELLRRYQLHYKELKKMKIRKSISEIRELENIEEHQSVD--IATL 751
Query: 707 VDQA---------ADLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 756
D+A + N++Q K +E +K+L VE + K+ ++ + + A + E
Sbjct: 752 EDEAQENKIKMKMVEKNMEQQKENMEHLKSLKVEAEN-KYDEIKQKINQLSELADPLKDE 810
Query: 757 FNLKQHE-KLALQASLHYEDCKKE----VEHCRKHLSDAKRQAESIAFITPELEKEFLEM 811
NL E + HYED +KE + ++ L +++ E ++ E +E+
Sbjct: 811 LNLADSEVDNQKRGKRHYEDKQKEHLDTLNKKKRELDMKEKELEEKMSQARQICPERIEV 870
Query: 812 PTTIEELEAAI---QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 868
+ L+ I + I ++ + + I+++Y+ + DL +K + K+ +K L
Sbjct: 871 KKSASILDKEINRLRQKIQAEHASYGDREEIMKQYQEARESYLDLDSKVKTLKRFIK-LL 929
Query: 869 AEIDALKEKWLPTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFR 927
EI + K R L + F + A G+++ D H+++ + I V+
Sbjct: 930 EEIMIHRYKTYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFD-HKNET----LTISVQPG 984
Query: 928 QSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLV 987
+ + SGGERS ST+ +++SL + PFR +DE + MD +N R ++
Sbjct: 985 EGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAMDMIL 1044
Query: 988 RAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1024
+ A Q LLTP+ + L S+ IL M+ P
Sbjct: 1045 KMADSQRFRQFILLTPQSMSSLPSSKLIRILR-MSDP 1080
Score = 187 (70.9 bits), Expect = 9.0e-28, Sum P(4) = 9.0e-28
Identities = 67/239 (28%), Positives = 118/239 (49%)
Query: 23 IIE-IELHNFMTFDHL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
IIE I+L NFM L K GS +N V+G NGSGKS+++ A+ + LGG R +S+
Sbjct: 54 IIESIQLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAITTNRGSSL 113
Query: 81 GAYVKRGEESGYIKISLR------------GDT--KEEHLTIMRKIDTRNKSEWFFNGKV 126
+VK G+ S I I++R GDT ++H+++ + KS +
Sbjct: 114 KGFVKDGQNSADISITIRNRGDDAYRGNVYGDTIIVQQHISMDGSRSYKLKSATELGAVI 173
Query: 127 -VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEETEKAVGDPQLPVQHC 184
K E++ I FNIQV+N L Q+ +F + + + KA Q+ +
Sbjct: 174 STKKEELIGILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYS 233
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPW 243
++E +K +T E + + + L++LK +E+E+ + + + + +E +K ++ W
Sbjct: 234 YIME--TKERTKE-QINQGEERLSELKRQCLEKEERFQNIAGLSTMKTNLEYLKHEMAW 289
Score = 111 (44.1 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 79/357 (22%), Positives = 154/357 (43%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRR-EMENH------INLRKRKLESIEK-- 695
Q E+RL E + L+KE E NI + K E H +N +++L +I
Sbjct: 248 QGEERLSELKRQCLEKE-ERFQNIAGLSTMKTNLEYLKHEMAWAVVNEIEKQLNAIRDNI 306
Query: 696 ---EDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 752
ED K +Q LN + KY +I++ L E +S + S +++ D
Sbjct: 307 KIGEDRAARLERKTEEQQVRLNEAEKKYK-DIQDKL-EKISQETSARAPECMALKADLTS 364
Query: 753 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE-LEKEFLEM 811
++ +N + E L ++ Y+ KK+ E + + + K+ A+ + PE LE++ +
Sbjct: 365 KKRAYN--EAEVLYNRSLNEYKALKKDDEQLCRRIEELKKSADQS--LEPERLERQ--KK 418
Query: 812 PTTIEELEAAIQDNISQANSIFFLNQNILQE--YEHRQRQIEDLSTKQEAD--KKELKRF 867
+ ++E A+QD S N Q +++ EH + + E+L K + +++LK
Sbjct: 419 ISWLKERIKALQDQESSVNQEIEQFQQAIEKDKEEHTRIKREELDVKTTLNFNQRQLKEL 478
Query: 868 L-AEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKF 926
++ D LK ++ P + L+ I++ + R G + H D + + + ++
Sbjct: 479 KDSKTDRLK-RFGPHVPALLEAIDDAYRRGHFTYKPVGPLGACIHLRDPE---LALAIES 534
Query: 927 RQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 983
G L+ H+ + ER + ++ T+ P +V E M + R +
Sbjct: 535 CLKGLLQAYCCHNHAD-ERVLQALMKKFYSPG-TSRPQIIVSEFRNEMYDVRHRAAY 589
Score = 81 (33.6 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 32/151 (21%), Positives = 68/151 (45%)
Query: 730 EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKK-----EVEHCR 784
EI + K + + L+ ++K +E+L + LHY++ KK + R
Sbjct: 676 EISDLEDEVENKKAQILNLQQHLSTLQKDIKCNEELLRRYQLHYKELKKMKIRKSISEIR 735
Query: 785 KHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYE 844
+ + + Q+ IA + E ++ ++M + +E ++N+ S+ +N +Y+
Sbjct: 736 ELENIEEHQSVDIATLEDEAQENKIKMKMVEKNMEQQ-KENMEHLKSLKVEAEN---KYD 791
Query: 845 HRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
+++I LS + K EL +E+D K
Sbjct: 792 EIKQKINQLSELADPLKDELNLADSEVDNQK 822
Score = 65 (27.9 bits), Expect = 5.8e-11, Sum P(4) = 5.8e-11
Identities = 39/205 (19%), Positives = 91/205 (44%)
Query: 738 YAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESI 797
Y S + D++I +LE ++ + L H +K+++ C + L + Q
Sbjct: 663 YTRPKFLSRDVDSEISDLEDEVENKKAQILNLQQHLSTLQKDIK-CNEELL-RRYQLHYK 720
Query: 798 AFITPELEKEFLEMPT--TIEE---LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIED 852
++ K E+ IEE ++ A ++ +Q N I + + + E ++ +E
Sbjct: 721 ELKKMKIRKSISEIRELENIEEHQSVDIATLEDEAQENKIKM--KMVEKNMEQQKENMEH 778
Query: 853 L-STKQEADKK--ELKRFLAEIDALKEKWLPTLRNLVAQIN--ETFSRNFQEMAVAGEVS 907
L S K EA+ K E+K+ + ++ L + L ++++ + R++++ +
Sbjct: 779 LKSLKVEAENKYDEIKQKINQLSELADPLKDELNLADSEVDNQKRGKRHYEDKQKEHLDT 838
Query: 908 LDEHESDFDKFGILIKVKFRQSGQL 932
L++ + + D ++ K Q+ Q+
Sbjct: 839 LNKKKRELDMKEKELEEKMSQARQI 863
Score = 58 (25.5 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 23/90 (25%), Positives = 40/90 (44%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE---KDV 221
K+ +ET P+ L K E R+ LN+ KAL + E + +
Sbjct: 343 KISQETSARA--PECMALKADLTSKKRAYNEAEVLYNRS---LNEYKALKKDDEQLCRRI 397
Query: 222 ERVRQRAELLEKVESMK--KKLPWLKYDMK 249
E +++ A+ + E ++ KK+ WLK +K
Sbjct: 398 EELKKSADQSLEPERLERQKKISWLKERIK 427
Score = 50 (22.7 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 23/97 (23%), Positives = 53/97 (54%)
Query: 370 KIEKLGSQILEL-GVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
KI K S+I EL ++ +Q + + E +NK+ ++ ++ ++ N + L +L+
Sbjct: 726 KIRKSISEIRELENIEEHQS-VDIATLEDEAQENKIKMKMVEKNMEQQKE-NMEHLKSLK 783
Query: 429 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 465
AEN ++ ++Q ++L++ A P+ E+N+++
Sbjct: 784 VE-AENKYDE---IKQKINQLSELA-DPLKDELNLAD 815
Score = 46 (21.3 bits), Expect = 9.0e-28, Sum P(4) = 9.0e-28
Identities = 12/55 (21%), Positives = 30/55 (54%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
++IEK + I + ++ + R + E++ + ++ L + + KD++DK K+
Sbjct: 293 NEIEKQLNAIRD-NIKIGEDRAARLERKT--EEQQVRLNEAEKKYKDIQDKLEKI 344
Score = 41 (19.5 bits), Expect = 2.9e-27, Sum P(4) = 2.9e-27
Identities = 11/75 (14%), Positives = 34/75 (45%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
Y+ DK+EK+ + + + + K++ N+ ++ + + K ++ + +L
Sbjct: 334 YKDIQDKLEKISQETSARAPECMALKADLTSKKRAYNEAEVLYNRSLNEYKALKKDDEQL 393
Query: 424 ---LHALRNSGAENI 435
+ L+ S +++
Sbjct: 394 CRRIEELKKSADQSL 408
Score = 37 (18.1 bits), Expect = 9.0e-28, Sum P(4) = 9.0e-28
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 591 ISRYGGHVSASVEPVNQS 608
+ R+G HV A +E ++ +
Sbjct: 486 LKRFGPHVPALLEAIDDA 503
>MGI|MGI:1914491 [details] [associations]
symbol:Smc6 "structural maintenance of chromosomes 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
evidence=ISO] [GO:0000781 "chromosome, telomeric region"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016605 "PML body" evidence=ISO] [GO:0030915
"Smc5-Smc6 complex" evidence=ISO] [GO:0090398 "cellular senescence"
evidence=ISO] InterPro:IPR027132 InterPro:IPR003395 Pfam:PF02463
MGI:MGI:1914491 GO:GO:0005524 GO:GO:0016605 GO:GO:0006281
HSSP:P58301 GO:GO:0000781 GO:GO:0000722 GO:GO:0090398
eggNOG:COG1196 GO:GO:0030915 PANTHER:PTHR19306:SF2 CTD:79677
HOVERGEN:HBG093964 OMA:LHYKELK OrthoDB:EOG44QT04 EMBL:AJ310552
EMBL:AK003872 EMBL:AK009009 EMBL:AK011982 EMBL:AK012626
EMBL:AK014442 EMBL:AK050341 EMBL:AK088002 EMBL:AK135873
EMBL:AK148478 EMBL:BC026429 EMBL:BC048790 EMBL:BC090630
EMBL:BC099955 EMBL:AK220488 IPI:IPI00165850 IPI:IPI00816943
RefSeq:NP_079971.2 UniGene:Mm.173953 ProteinModelPortal:Q924W5
SMR:Q924W5 IntAct:Q924W5 STRING:Q924W5 PhosphoSite:Q924W5
PaxDb:Q924W5 PRIDE:Q924W5 Ensembl:ENSMUST00000020931 GeneID:67241
KEGG:mmu:67241 UCSC:uc007nax.1 UCSC:uc007nay.1
GeneTree:ENSGT00550000074816 InParanoid:Q924W5 NextBio:323984
Bgee:Q924W5 CleanEx:MM_SMC6 Genevestigator:Q924W5 Uniprot:Q924W5
Length = 1097
Score = 215 (80.7 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 101/401 (25%), Positives = 176/401 (43%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRK-RKLESIEKEDDINTALA- 704
+QRL E K K EE++ Q+ K +M+ N+ + R+LE+IE+ ++ A
Sbjct: 692 QQRLSALE--KDIKRNEELLKRCQLHY-KEIKMKIRKNISEIRELENIEEHQSVDIATLE 748
Query: 705 ------KLVDQAADLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
K+ Q + N++Q K +E +K+L +E + K+ + + + A + E
Sbjct: 749 DEAEENKIKMQMVEKNMEQQKENMENLKSLKIEAEN-KYDTIKLKINQLSELADPLKDEL 807
Query: 758 NLKQHE-KLALQASLHYEDCKKE-----------VEHCRKHLSDAKRQAESIAFITPELE 805
NL E + HYED +KE ++ K L + QA I E++
Sbjct: 808 NLADSEVDSQKRGKQHYEDKQKEHLDTLNKKRRELDMKEKELQEKMSQARQICPERIEVK 867
Query: 806 KEFLEMPTTIEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKEL 864
K + I L IQ ++ S + + I+++Y+ + DL K ++ +
Sbjct: 868 KSASILDKEINRLRQKIQAEHASHGD-----REEIMKQYQEARETYLDLDNKVRTLRRFI 922
Query: 865 KRFLAEIDALKEKWLPTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIK 923
K L EI + K R L + F + A G+++ D H+++ + I
Sbjct: 923 K-LLEEIMTHRYKTYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFD-HKNET----LSIT 976
Query: 924 VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 983
V+ + + SGGERS ST+ +++SL + PFR +DE + MD +N R
Sbjct: 977 VQPGEGNKASFNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAM 1036
Query: 984 QQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1024
+++ A Q LLTP+ + L S+ IL M+ P
Sbjct: 1037 DMILKMADSQRFRQFILLTPQSMSSLPSSKLIRILR-MSDP 1076
Score = 198 (74.8 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 71/240 (29%), Positives = 120/240 (50%)
Query: 23 IIE-IELHNFMTFDHL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
IIE I+L NFM L K GS +N V+G NGSGKS+++ A+ + LGG R +S+
Sbjct: 53 IIESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSL 112
Query: 81 GAYVKRGEESGYIKISLR------------GDT--KEEHLTIMRKIDTRNKSEWFFNGKV 126
+VK G+ S I I+LR GD+ ++H+++ + KSE G V
Sbjct: 113 KGFVKAGQNSADISITLRNRGDDAFRANVYGDSIVVQQHISVDGSRSYKLKSE---KGTV 169
Query: 127 VP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEETEKAVGDPQLPVQH 183
V K E++ I FNIQV+N L Q+ +F + + + KA Q+ +
Sbjct: 170 VSTRKEELIAILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDY 229
Query: 184 CALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPW 243
++E +K +T E + + + L +LK +E+E+ + + + + +E +K ++ W
Sbjct: 230 SYIME--TKERTKE-QINQGEERLTELKRQCLEKEERFQNIAGLSTMKTNLEYLKHEMAW 286
Score = 98 (39.6 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
Identities = 38/157 (24%), Positives = 78/157 (49%)
Query: 723 EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK----K 778
EI +L EI + K H+ +++ ++ LE ++K++E+L + LHY++ K K
Sbjct: 673 EISDLETEIENKKG-----HIITLQ--QRLSALEKDIKRNEELLKRCQLHYKEIKMKIRK 725
Query: 779 EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQN 838
+ R+ + + Q+ IA + E E+ ++M + +E ++N+ S+ +N
Sbjct: 726 NISEIRELENIEEHQSVDIATLEDEAEENKIKMQMVEKNMEQQ-KENMENLKSLKIEAEN 784
Query: 839 ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
+Y+ + +I LS + K EL +E+D+ K
Sbjct: 785 ---KYDTIKLKINQLSELADPLKDELNLADSEVDSQK 818
Score = 70 (29.7 bits), Expect = 6.4e-13, Sum P(4) = 6.4e-13
Identities = 45/212 (21%), Positives = 95/212 (44%)
Query: 678 EMEN---HINLRKRKLESIEKEDDINTALAKLVD-QAADLNIQQFKYAIEIKNL------ 727
E+EN HI +++L ++EK+ N L K ++ ++ K EI+ L
Sbjct: 680 EIENKKGHIITLQQRLSALEKDIKRNEELLKRCQLHYKEIKMKIRKNISEIRELENIEEH 739
Query: 728 -LVEIVSCKWSYAEKHMASIEFDAK-IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRK 785
V+I + + AE++ ++ K + + + N++ + L ++A Y+ K ++ +
Sbjct: 740 QSVDIATLE-DEAEENKIKMQMVEKNMEQQKENMENLKSLKIEAENKYDTIKLKINQLSE 798
Query: 786 HLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEH 845
L+D + ++A + +K + E+ + D +++ + + LQE
Sbjct: 799 -LADPLKDELNLADSEVDSQKRGKQH---YEDKQKEHLDTLNKKRRELDMKEKELQEKMS 854
Query: 846 RQRQI--EDLSTKQEAD--KKELKRFLAEIDA 873
+ RQI E + K+ A KE+ R +I A
Sbjct: 855 QARQICPERIEVKKSASILDKEINRLRQKIQA 886
Score = 67 (28.6 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 38/167 (22%), Positives = 71/167 (42%)
Query: 747 EFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEK 806
E + ++ + N+K E+ A + E+ + + K D + + E I+ T
Sbjct: 291 EIEKQLNAIRDNIKIGEERAAKLDRKMEEQQVRLNDAEKKYKDIQDKLEKISEETNARAP 350
Query: 807 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDL--STKQEADKKEL 864
E + + T + A D N + + ++ E ++IE+L ST Q + + L
Sbjct: 351 ECMALKTDVIARTRAFNDAEVLYNRSLNEYKALKKDGEQLCKRIEELKKSTDQSLEPERL 410
Query: 865 KRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEH 911
+R I LKEK + L++ +N+ + F E A+ E EH
Sbjct: 411 ER-QKRICWLKEK-VKALQDQEHTVNQE-AEQF-EQAI--EKDKQEH 451
Score = 67 (28.6 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 47/243 (19%), Positives = 110/243 (45%)
Query: 644 MQTEQRLIEDEAA-----KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-D 697
M+T ++ E A +++K+ I + ++I + + +++ + ++ +L EK+
Sbjct: 273 MKTNLEYLKHEMAWAVVNEIEKQLNAIRDNIKIGEERAAKLDRKMEEQQVRLNDAEKKYK 332
Query: 698 DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
DI L K+ ++ N + A E L ++++ ++ + A + ++ + E +
Sbjct: 333 DIQDKLEKISEET---NAR----APECMALKTDVIARTRAFND---AEVLYNRSLNEYKA 382
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI-- 815
K E+L + E+ KK + + +RQ + I ++ ++ K + T+
Sbjct: 383 LKKDGEQLCKRI----EELKKSTDQSLEP-ERLERQ-KRICWLKEKV-KALQDQEHTVNQ 435
Query: 816 --EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 873
E+ E AI+ + + + + + + QRQ+++L + D+ LKRF + A
Sbjct: 436 EAEQFEQAIEKDKQEHGRVRKEDIEVRHALNYNQRQLKELKDSK-TDR--LKRFGPHVPA 492
Query: 874 LKE 876
L E
Sbjct: 493 LLE 495
Score = 52 (23.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 387 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFE 437
Q+RL EK+ + +N+ L++C K+++ K K + +R ENI E
Sbjct: 692 QQRLSALEKD--IKRNEELLKRCQLHYKEIKMKIRKNISEIRE--LENIEE 738
Score = 51 (23.0 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE---KDV 221
K+ EET P+ ++ ++ E R+ LN+ KAL + E K +
Sbjct: 340 KISEETNARA--PECMALKTDVIARTRAFNDAEVLYNRS---LNEYKALKKDGEQLCKRI 394
Query: 222 ERVRQRAELLEKVESMK--KKLPWLKYDMK 249
E +++ + + E ++ K++ WLK +K
Sbjct: 395 EELKKSTDQSLEPERLERQKRICWLKEKVK 424
Score = 49 (22.3 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 12/55 (21%), Positives = 31/55 (56%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
++IEK + I + ++ ++R K +++ + + ++ L + KD++DK K+
Sbjct: 290 NEIEKQLNAIRD-NIKIGEERAAKLDRK--MEEQQVRLNDAEKKYKDIQDKLEKI 341
Score = 45 (20.9 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 386 NQKRLQKSEKEKILNQNKLTLRQ-CSDRLK 414
N+KR + KEK L + RQ C +R++
Sbjct: 836 NKKRRELDMKEKELQEKMSQARQICPERIE 865
Score = 43 (20.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 23/97 (23%), Positives = 53/97 (54%)
Query: 370 KIEKLGSQILEL-GVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
KI K S+I EL ++ +Q + + E +NK+ + Q ++ + + +N + L +L+
Sbjct: 722 KIRKNISEIRELENIEEHQS-VDIATLEDEAEENKIKM-QMVEKNMEQQKENMENLKSLK 779
Query: 429 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 465
AEN ++ ++ ++L++ A P+ E+N+++
Sbjct: 780 IE-AENKYDT---IKLKINQLSELA-DPLKDELNLAD 811
Score = 37 (18.1 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 591 ISRYGGHVSASVEPVNQS 608
+ R+G HV A +E ++ +
Sbjct: 483 LKRFGPHVPALLEAIDDA 500
>UNIPROTKB|F1SCS4 [details] [associations]
symbol:SMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090398 "cellular senescence" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] InterPro:IPR027132
InterPro:IPR003395 Pfam:PF02463 GO:GO:0016605 GO:GO:0000781
GO:GO:0000722 GO:GO:0090398 GO:GO:0030915 PANTHER:PTHR19306:SF2
OMA:LHYKELK GeneTree:ENSGT00550000074816 EMBL:CU468500
EMBL:CU856226 Ensembl:ENSSSCT00000009425 Uniprot:F1SCS4
Length = 1098
Score = 216 (81.1 bits), Expect = 3.3e-27, Sum P(3) = 3.3e-27
Identities = 94/388 (24%), Positives = 170/388 (43%)
Query: 660 KEREEIINIVQIEKRKRREMENHINLRK-RKLESIEKEDDINTALA-------KLVDQAA 711
K EE + Q+ ++ ++M+ L + R+LE+IE+ ++ A K+ +
Sbjct: 703 KRNEEFLRRCQLHYKELKKMKIRKCLSEIRELENIEEHQSVDIATLEDEAHENKMKMKTV 762
Query: 712 DLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE-KLALQA 769
+ N+++ K +E +K+L +E + K+ + + + A + E NL E +
Sbjct: 763 EKNMEKQKEHMEYLKSLKIEAEN-KYDAIKLKINQLSEQADPLKDELNLADSEVDNQKRG 821
Query: 770 SLHYEDC-----------KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
HYED K+E++ K L + QA I E++K + I L
Sbjct: 822 KRHYEDKQKEHLDTLNKKKRELDMKEKELEEKMSQARQICPERIEVKKSASILDKEINRL 881
Query: 819 EAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
IQ ++ S + + I+++Y+ + DL K K+ +K L EI + K
Sbjct: 882 RQKIQAEHASHGD-----REEIMRQYQEAKETYLDLDNKVRTLKRFIK-LLEEIMTHRYK 935
Query: 878 WLPTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLS 936
R L + F + A G+++ D H+++ + I V+ + +
Sbjct: 936 TYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFD-HKNET----LTISVQPGEGSKAAFND 990
Query: 937 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 996
SGGERS ST+ +++SL + PFR +DE + MD +N R +++ A
Sbjct: 991 MRSLSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAMDMILKMADSQRFR 1050
Query: 997 QCFLLTPKLLPDLEYSEACSILNIMNGP 1024
Q LLTP+ + L S+ IL M+ P
Sbjct: 1051 QFILLTPQSMSSLPPSKLIRILR-MSDP 1077
Score = 187 (70.9 bits), Expect = 3.3e-27, Sum P(3) = 3.3e-27
Identities = 68/237 (28%), Positives = 115/237 (48%)
Query: 23 IIE-IELHNFMTFDHL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
IIE I+L NFM L K GS +N V+G NGSGKS+++ A+ + LGG R +S+
Sbjct: 53 IIESIQLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAIATNRGSSL 112
Query: 81 GAYVKRGEESGYIKISLR--GDTKE------EHLTIMRKIDTRNKSEWFFN---GKVVP- 128
+VK G+ S I I+LR GD + + + + I + G VV
Sbjct: 113 KGFVKDGQNSADISITLRNRGDDAYRANVYGDSIIVQQHISMDGSRSYKLRSQTGAVVST 172
Query: 129 -KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEETEKAVGDPQLPVQHCAL 186
K E++ I FNIQV+N L Q+ +F + + + KA Q+ + +
Sbjct: 173 KKEELIGILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYI 232
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPW 243
+E +K +T E + + + L +LK +E+E+ + + + + +E +K ++ W
Sbjct: 233 ME--TKERTKE-QINQGEERLTELKRQCLEKEERFQSIAGLSTMKTNLEDLKHEMAW 286
Score = 88 (36.0 bits), Expect = 6.2e-14, Sum P(3) = 6.2e-14
Identities = 29/126 (23%), Positives = 63/126 (50%)
Query: 755 LEFNLKQHEKLALQASLHYEDCKK-EVEHCRKHLSDAKR----QAESIAFITPELEKEFL 809
LE ++K++E+ + LHY++ KK ++ C + + + Q+ IA + E + +
Sbjct: 698 LEKDIKRNEEFLRRCQLHYKELKKMKIRKCLSEIRELENIEEHQSVDIATLEDEAHENKM 757
Query: 810 EMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLA 869
+M T + +E ++++ S+ +N +Y+ + +I LS + + K EL +
Sbjct: 758 KMKTVEKNMEKQ-KEHMEYLKSLKIEAEN---KYDAIKLKINQLSEQADPLKDELNLADS 813
Query: 870 EIDALK 875
E+D K
Sbjct: 814 EVDNQK 819
Score = 76 (31.8 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 46/224 (20%), Positives = 101/224 (45%)
Query: 657 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNI 715
+++K+ I + ++I + + +E ++ +L EK+ DI L K+ + + N
Sbjct: 291 EIEKQLNAIRDNIKIGEDRAARLERKTEEQQVRLNEAEKKYKDIQDKLEKI---SQETNA 347
Query: 716 QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYED 775
+ A E L ++ S K Y E A + ++ + E K E+L + E+
Sbjct: 348 R----APECLALKADLTSKKRVYNE---AEVLYNRSLNEYRALKKDDEQLCKRI----EE 396
Query: 776 CKKEVEHCRKHLSDAKRQAESIAFITPE---LEKEFLEMPTTIEELEAAIQDNISQANSI 832
+K + + +RQ + I+++ L+ + + + IE+ + A++ + + I
Sbjct: 397 LRKSADQSMEP-ERLERQ-KKISWLKERVKALQDQEISVNQEIEQFQQAVEKDKEEHTRI 454
Query: 833 FFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
++ Q + Q+Q+++L + D+ LKRF + AL E
Sbjct: 455 KREELDVKQILNYNQKQLKELKDSK-TDR--LKRFGPNVPALLE 495
Score = 74 (31.1 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 40/178 (22%), Positives = 79/178 (44%)
Query: 654 EAAKLQKE-REEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAAD 712
+ A L+ E E + + +EK ++ E+ L+ K+E+ K D I + +L +QA
Sbjct: 744 DIATLEDEAHENKMKMKTVEKNMEKQKEHMEYLKSLKIEAENKYDAIKLKINQLSEQADP 803
Query: 713 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQ-HEKLALQAS 770
L + E+ N K Y +K ++ + K REL+ K+ EK++
Sbjct: 804 LKDELNLADSEVDNQK----RGKRHYEDKQKEHLDTLNKKKRELDMKEKELEEKMSQARQ 859
Query: 771 LHYE--DCKKEVEHCRKHLSDAKR--QAESIAF-ITPELEKEFLEMPTTIEELEAAIQ 823
+ E + KK K ++ ++ QAE + E+ +++ E T +L+ ++
Sbjct: 860 ICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIMRQYQEAKETYLDLDNKVR 917
Score = 62 (26.9 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 35/159 (22%), Positives = 68/159 (42%)
Query: 168 EETEKAVGDPQLPVQHC-AL-VEKSSKLKTI-ECTVKRNGDTLNQLKALNVEQE---KDV 221
++ EK + C AL + +SK + E V N +LN+ +AL + E K +
Sbjct: 336 DKLEKISQETNARAPECLALKADLTSKKRVYNEAEVLYNR-SLNEYRALKKDDEQLCKRI 394
Query: 222 ERVRQRAELLEKVESMK--KKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSK 279
E +R+ A+ + E ++ KK+ WLK +K + + +F +
Sbjct: 395 EELRKSADQSMEPERLERQKKISWLKERVKALQ------------DQEISVNQEIEQFQQ 442
Query: 280 PIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLE-KVD 317
+E K+E + + + ++N N K+ + + K D
Sbjct: 443 AVEKDKEEHTRIKREELDVKQILNYNQKQLKELKDSKTD 481
Score = 58 (25.5 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 33/111 (29%), Positives = 51/111 (45%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED-KNNKLLHAL 427
+++E +QIL L Q+ L EK+ + +N+ LR+C K+++ K K L +
Sbjct: 679 NEVENKKAQILNL-----QQHLCALEKD--IKRNEEFLRRCQLHYKELKKMKIRKCLSEI 731
Query: 428 RNSGAENIFEAY----CWLQQHRHELNKEAYGPVLLEVNVSN-RAHANYLE 473
R ENI E L+ HE NK V E N+ + H YL+
Sbjct: 732 RE--LENIEEHQSVDIATLEDEAHE-NKMKMKTV--EKNMEKQKEHMEYLK 777
Score = 49 (22.3 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 33/146 (22%), Positives = 63/146 (43%)
Query: 842 EYEHRQRQIEDLSTKQEADKKELKR---FLAEIDA-LKEKWLPTLRNLVAQINETFSRNF 897
E E+++ QI +L A +K++KR FL KE +R +++I E N
Sbjct: 680 EVENKKAQILNLQQHLCALEKDIKRNEEFLRRCQLHYKELKKMKIRKCLSEIREL--ENI 737
Query: 898 QEMAVAGEVSLDE--HESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVS 955
+E +L++ HE+ K + K +Q +E L + + + L +
Sbjct: 738 EEHQSVDIATLEDEAHENKM-KMKTVEKNMEKQKEHMEYLKSLKIEAENKYDAIKLKINQ 796
Query: 956 LQDLTNCPFRVVDEINQGMDPINERK 981
L + + P + DE+N ++ +K
Sbjct: 797 LSEQAD-PLK--DELNLADSEVDNQK 819
Score = 49 (22.3 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 37/172 (21%), Positives = 81/172 (47%)
Query: 652 EDEAAKLQKEREEI-INIVQIEKRKRREMENHIN-----LRKRKLESIEKEDDINTALAK 705
ED AA+L+++ EE + + + EK K +++++ + R E + + D+ T+ +
Sbjct: 307 EDRAARLERKTEEQQVRLNEAEK-KYKDIQDKLEKISQETNARAPECLALKADL-TSKKR 364
Query: 706 LVDQAADL-NIQQFKY-AI--EIKNLLVEIVSCKWSYAEKHMAS--IEFDAKIRELEFNL 759
+ ++A L N +Y A+ + + L I + S A++ M +E KI L+ +
Sbjct: 365 VYNEAEVLYNRSLNEYRALKKDDEQLCKRIEELRKS-ADQSMEPERLERQKKISWLKERV 423
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM 811
K + + + E ++ VE ++ + KR+ + I +K+ E+
Sbjct: 424 KALQDQEISVNQEIEQFQQAVEKDKEEHTRIKREELDVKQILNYNQKQLKEL 475
Score = 46 (21.3 bits), Expect = 3.3e-27, Sum P(3) = 3.3e-27
Identities = 12/55 (21%), Positives = 30/55 (54%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
++IEK + I + ++ + R + E++ + ++ L + + KD++DK K+
Sbjct: 290 NEIEKQLNAIRD-NIKIGEDRAARLERKT--EEQQVRLNEAEKKYKDIQDKLEKI 341
Score = 43 (20.2 bits), Expect = 6.7e-27, Sum P(3) = 6.7e-27
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 389 RLQKSEKE--KILNQNKLTLRQC----SDRLKDMEDKNNKLLHALRNS 430
R+++ E + +ILN N+ L++ +DRLK LL A+ N+
Sbjct: 453 RIKREELDVKQILNYNQKQLKELKDSKTDRLKRFGPNVPALLEAIDNA 500
Score = 43 (20.2 bits), Expect = 6.7e-27, Sum P(3) = 6.7e-27
Identities = 13/75 (17%), Positives = 35/75 (46%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDR---LKDMEDKN 420
Y+ DK+EK+ + + + + K+++ N+ ++ + + LK +++
Sbjct: 331 YKDIQDKLEKISQETNARAPECLALKADLTSKKRVYNEAEVLYNRSLNEYRALKKDDEQL 390
Query: 421 NKLLHALRNSGAENI 435
K + LR S +++
Sbjct: 391 CKRIEELRKSADQSM 405
>UNIPROTKB|E2QUA0 [details] [associations]
symbol:SMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090398 "cellular senescence" evidence=IEA]
[GO:0030915 "Smc5-Smc6 complex" evidence=IEA] [GO:0016605 "PML
body" evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] InterPro:IPR027132
InterPro:IPR003395 Pfam:PF02463 GO:GO:0016605 GO:GO:0000781
GO:GO:0000722 GO:GO:0090398 GO:GO:0030915 PANTHER:PTHR19306:SF2
CTD:79677 OMA:LHYKELK GeneTree:ENSGT00550000074816
EMBL:AAEX03010748 RefSeq:XP_532882.3 ProteinModelPortal:E2QUA0
Ensembl:ENSCAFT00000006012 GeneID:475675 KEGG:cfa:475675
NextBio:20851463 Uniprot:E2QUA0
Length = 1097
Score = 215 (80.7 bits), Expect = 7.1e-27, Sum P(4) = 7.1e-27
Identities = 97/389 (24%), Positives = 169/389 (43%)
Query: 660 KEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA--------- 710
K EE + QI R+ + R+LE+IE+ ++ +A L D+A
Sbjct: 703 KRNEEFLRRRQIHYRELKVKITESISEIRELENIEEHQSVD--IATLEDEAQENKIKMKM 760
Query: 711 ADLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE-KLALQ 768
+ N++Q K +E +KNL +E + K+ ++ + + A+ + E NL E +
Sbjct: 761 VEKNMEQQKENMEHLKNLKIEAEN-KYDAIKQKINQLSDLAEPLKDELNLADSEVDNQKR 819
Query: 769 ASLHYEDC-----------KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
HYE+ K+E++ K L + QA I E++K + I
Sbjct: 820 GKRHYEEKQKEHLDTLNKKKRELDMKEKELEEKMSQARQICPERIEVKKSASILDKEINR 879
Query: 818 LEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
L IQ ++ S + + I+++Y+ + DL K K+ +K L EI +
Sbjct: 880 LRQKIQAEHASHGD-----REEIMRQYQEARETYLDLDNKVRTLKRFIK-LLEEIMTHRY 933
Query: 877 KWLPTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL 935
K R L + F + A G+++ D H+++ + I V+ + +
Sbjct: 934 KTYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFD-HKNET----LSISVQPGEGNRAAFN 988
Query: 936 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNT 995
SGGERS ST+ +++SL + PFR +DE + MD +N R +++ A
Sbjct: 989 DMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAMDMILKMADSQRF 1048
Query: 996 PQCFLLTPKLLPDLEYSEACSILNIMNGP 1024
Q LLTP+ + L S+ IL M+ P
Sbjct: 1049 RQFILLTPQSMSSLPSSKLIRILR-MSDP 1076
Score = 193 (73.0 bits), Expect = 7.1e-27, Sum P(4) = 7.1e-27
Identities = 71/240 (29%), Positives = 119/240 (49%)
Query: 23 IIE-IELHNFMTFDHL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
IIE I+L NFM L K GS +N V+G NGSGKS+++ A+ + LGG R +S+
Sbjct: 53 IIESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSL 112
Query: 81 GAYVKRGEESGYIKISLR--GDTK------------EEHLTIMRKIDTRNKSEWFFNGKV 126
+VK G+ S I I+LR GD ++H+++ + KSE G V
Sbjct: 113 KGFVKDGQNSADISITLRNRGDDAYRANVYGNSIVVQQHISMDGSRSYKLKSE---TGTV 169
Query: 127 VP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEETEKAVGDPQLPVQH 183
V K E++ I FNIQV+N L Q+ +F + + + KA Q+ +
Sbjct: 170 VSTRKEELIAILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDY 229
Query: 184 CALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPW 243
++E +K +T E + + + L +LK +E+E+ + + + + +E +K ++ W
Sbjct: 230 SYIME--TKERTKE-QINQGEERLTELKRQCLEKEERFQSIAGLSTMKTNLEYLKHEMAW 286
Score = 86 (35.3 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 43/178 (24%), Positives = 80/178 (44%)
Query: 654 EAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAAD 712
+ A L+ E +E I + +EK ++ EN +L+ K+E+ K D I + +L D A
Sbjct: 743 DIATLEDEAQENKIKMKMVEKNMEQQKENMEHLKNLKIEAENKYDAIKQKINQLSDLAEP 802
Query: 713 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQ-HEKLALQAS 770
L + E+ N K Y EK ++ + K REL+ K+ EK++
Sbjct: 803 LKDELNLADSEVDNQK----RGKRHYEEKQKEHLDTLNKKKRELDMKEKELEEKMSQARQ 858
Query: 771 LHYE--DCKKEVEHCRKHLSDAKR--QAESIAF-ITPELEKEFLEMPTTIEELEAAIQ 823
+ E + KK K ++ ++ QAE + E+ +++ E T +L+ ++
Sbjct: 859 ICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIMRQYQEARETYLDLDNKVR 916
Score = 80 (33.2 bits), Expect = 4.3e-13, Sum P(4) = 4.3e-13
Identities = 31/155 (20%), Positives = 70/155 (45%)
Query: 725 KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK----KEV 780
K++ EI + K + + LE ++K++E+ + +HY + K + +
Sbjct: 668 KDVDSEISDLENEVENKKAQILNLQQHLSALEKDIKRNEEFLRRRQIHYRELKVKITESI 727
Query: 781 EHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNIL 840
R+ + + Q+ IA + E ++ ++M + +E ++N+ ++ +N
Sbjct: 728 SEIRELENIEEHQSVDIATLEDEAQENKIKMKMVEKNMEQQ-KENMEHLKNLKIEAEN-- 784
Query: 841 QEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
+Y+ +++I LS E K EL +E+D K
Sbjct: 785 -KYDAIKQKINQLSDLAEPLKDELNLADSEVDNQK 818
Score = 77 (32.2 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 50/242 (20%), Positives = 109/242 (45%)
Query: 644 MQTEQRLIEDEAA-----KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-D 697
M+T ++ E A +++K+ I + ++I + + ++ + ++ +L EK+
Sbjct: 273 MKTNLEYLKHEMAWAVVNEIEKQLNAIRDNIKIGEDRAARLDRKMEEQQVRLNEAEKKYK 332
Query: 698 DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
DI L K+ + + N + A E L ++ + K Y E A + ++ + E +
Sbjct: 333 DIQDKLEKI---SQETNAR----APECMALKTDVTAKKRVYNE---AEVLYNRSLNEYKA 382
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE---LEKEFLEMPTT 814
+K E+L + E+ KK + + +RQ + I+++ L+ + +
Sbjct: 383 LMKDDEQLCKRI----EELKKSTDQSLEP-ERLERQ-KKISWLKERVKALQDQESSINQE 436
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
IE+ + AI+ + + I ++ + QRQ+++L + D+ LKRF + AL
Sbjct: 437 IEQFQQAIEKDKEERIRIKREELDVKHTLSYNQRQLKELKDSK-TDR--LKRFGPHVPAL 493
Query: 875 KE 876
E
Sbjct: 494 LE 495
Score = 72 (30.4 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 32/155 (20%), Positives = 69/155 (44%)
Query: 747 EFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEK 806
E + ++ + N+K E A + E+ + + K D + + E I+ T
Sbjct: 291 EIEKQLNAIRDNIKIGEDRAARLDRKMEEQQVRLNEAEKKYKDIQDKLEKISQETNARAP 350
Query: 807 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDL--STKQEADKKEL 864
E + + T + + + N + ++++ E ++IE+L ST Q + + L
Sbjct: 351 ECMALKTDVTAKKRVYNEAEVLYNRSLNEYKALMKDDEQLCKRIEELKKSTDQSLEPERL 410
Query: 865 KRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQE 899
+R +I LKE+ + L++ + IN+ + FQ+
Sbjct: 411 ER-QKKISWLKER-VKALQDQESSINQEIEQ-FQQ 442
Score = 67 (28.6 bits), Expect = 8.5e-12, Sum P(4) = 8.5e-12
Identities = 33/138 (23%), Positives = 64/138 (46%)
Query: 745 SIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPEL 804
S + D++I +LE ++ + L H +K+++ + L +RQ I + EL
Sbjct: 667 SKDVDSEISDLENEVENKKAQILNLQQHLSALEKDIKRNEEFLR--RRQ---IHY--REL 719
Query: 805 EKEFLEMPTTIEELEAAIQDNISQANSIFFLN-QNILQEYEHRQRQIEDLSTKQEADKKE 863
+ + E + I ELE NI + S+ ++ QE + + + +E +Q+ + +
Sbjct: 720 KVKITESISEIRELE-----NIEEHQSVDIATLEDEAQENKIKMKMVEKNMEQQKENMEH 774
Query: 864 LKRFLAEI----DALKEK 877
LK E DA+K+K
Sbjct: 775 LKNLKIEAENKYDAIKQK 792
Score = 56 (24.8 bits), Expect = 9.7e-13, Sum P(3) = 9.7e-13
Identities = 43/187 (22%), Positives = 80/187 (42%)
Query: 84 VKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQV 143
+ +GEE ++ + KEE + + T + + ++ V EI K+ N
Sbjct: 243 INQGEER-LTELKRQCLEKEERFQSIAGLSTMKTNLEYLKHEMA-WAVVNEIEKQLNAIR 300
Query: 144 NNLTQFLPQDRVCEF-AKLSPVKL-LEETEKAVGDPQLPVQHC-----ALVEKSSKLKTI 196
+N+ + +DR K+ ++ L E EK D Q ++ A + LKT
Sbjct: 301 DNIK--IGEDRAARLDRKMEEQQVRLNEAEKKYKDIQDKLEKISQETNARAPECMALKT- 357
Query: 197 ECTVKRN---------GDTLNQLKALNVEQE---KDVERVRQRAELLEKVESMK--KKLP 242
+ T K+ +LN+ KAL + E K +E +++ + + E ++ KK+
Sbjct: 358 DVTAKKRVYNEAEVLYNRSLNEYKALMKDDEQLCKRIEELKKSTDQSLEPERLERQKKIS 417
Query: 243 WLKYDMK 249
WLK +K
Sbjct: 418 WLKERVK 424
Score = 46 (21.3 bits), Expect = 7.1e-27, Sum P(4) = 7.1e-27
Identities = 11/55 (20%), Positives = 31/55 (56%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
++IEK + I + ++ + R + +++ + + ++ L + + KD++DK K+
Sbjct: 290 NEIEKQLNAIRD-NIKIGEDRAARLDRK--MEEQQVRLNEAEKKYKDIQDKLEKI 341
Score = 41 (19.5 bits), Expect = 2.3e-26, Sum P(4) = 2.3e-26
Identities = 13/75 (17%), Positives = 34/75 (45%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD-MEDKNN- 421
Y+ DK+EK+ + + + + K+++ N+ ++ + + K M+D
Sbjct: 331 YKDIQDKLEKISQETNARAPECMALKTDVTAKKRVYNEAEVLYNRSLNEYKALMKDDEQL 390
Query: 422 -KLLHALRNSGAENI 435
K + L+ S +++
Sbjct: 391 CKRIEELKKSTDQSL 405
Score = 37 (18.1 bits), Expect = 7.1e-27, Sum P(4) = 7.1e-27
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 591 ISRYGGHVSASVEPVNQS 608
+ R+G HV A +E ++ +
Sbjct: 483 LKRFGPHVPALLEAIDDA 500
>UNIPROTKB|E1BWW3 [details] [associations]
symbol:SMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000722 "telomere maintenance via
recombination" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0030915 "Smc5-Smc6 complex" evidence=IEA] [GO:0090398 "cellular
senescence" evidence=IEA] InterPro:IPR027132 InterPro:IPR003395
Pfam:PF02463 GO:GO:0016605 GO:GO:0000781 GO:GO:0000722
GO:GO:0090398 GO:GO:0030915 PANTHER:PTHR19306:SF2
GeneTree:ENSGT00550000074816 OMA:IVNTHIN EMBL:AADN02018598
EMBL:AADN02018599 EMBL:AADN02018600 IPI:IPI00591386
Ensembl:ENSGALT00000026569 Uniprot:E1BWW3
Length = 1100
Score = 206 (77.6 bits), Expect = 7.5e-27, Sum P(3) = 7.5e-27
Identities = 91/388 (23%), Positives = 175/388 (45%)
Query: 657 KLQKEREEII-NIVQIEKRKRREMENHINLRKRKLE--SIEKEDDINTALAKLVDQAADL 713
+L EI N + ++ + E I +R+ E +E D+I ++++ A+
Sbjct: 696 RLSSTENEIKQNESHLHHHRQHQKELQIKIRRTAAEIADLENVDEIQYMDIRVLEDVAEE 755
Query: 714 N---IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI-EFDAKIRELEFNLKQH-EKLALQ 768
N ++ K ++ ++ +E ++ AEK I E +++ ++ +K +K +
Sbjct: 756 NKKKMETVKQEMQEESRKMEELNEILRAAEKRFEEIKEKMSQVEDITNPIKDELDKADSE 815
Query: 769 AS------LHYEDCKKEVEHC-RKH---LSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+YED KKE C +KH L+ +++ E ++ E +E+ T++ L
Sbjct: 816 VENRRRRLQYYEDKKKEHLTCIKKHKELLAAKEKELEEKTAQARQIYSERIEVSRTVKSL 875
Query: 819 EAA---IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
+A +++ I S + I+Q + + + ED ++K KK + R L EI +
Sbjct: 876 DAEMNRLRERIKTEKSHRGNTEEIIQRFLDAKERYEDANSKVNNLKKFI-RVLEEIMTQR 934
Query: 876 EK-WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEV 934
+ LR L + F + +G + D H+++ +LI V+ + +
Sbjct: 935 FNIYRRFLRLLSLRCKLYFDHLLRIRGCSGRILFD-HKNET----LLITVQPGEEDRPAP 989
Query: 935 LSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPN 994
+ SGGERS ST+ +++SL +T PFR +DE + MD +N R +++ A
Sbjct: 990 SNVRSLSGGERSFSTVCFILSLWSITESPFRCLDEFDVYMDMLNRRIAMDMILKVADSQC 1049
Query: 995 TPQCFLLTPKLLPDLEYSEACSILNIMN 1022
Q LLTP+ + L S IL + +
Sbjct: 1050 YRQFILLTPQSMSFLPVSSRIRILRMQD 1077
Score = 188 (71.2 bits), Expect = 7.5e-27, Sum P(3) = 7.5e-27
Identities = 74/244 (30%), Positives = 118/244 (48%)
Query: 23 IIE-IELHNFMTFDHLICKP---GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRAT 78
IIE I+L NFM H + P GS LN +IG NGSGKSS++ A+ + LGG R +
Sbjct: 55 IIESIQLKNFMC--HSMLGPFQFGSNLNFIIGNNGSGKSSVLTALIVGLGGKATATNRGS 112
Query: 79 SIGAYVKRGEESGYIKISLR------------GDT--KEEHLTIMRKIDTRNKSEWFFNG 124
S+ +VK GE S I ++L+ GD+ H+ + R KS+ +G
Sbjct: 113 SLKMFVKSGETSADISVTLQNQGRDAFKPELYGDSIIVNTHINLEGSRTYRLKSK---SG 169
Query: 125 KVVP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQ 182
++ K E+L + FNIQV N L Q E +KL ++ E +K +
Sbjct: 170 AIISSKKEELLGMLDHFNIQVENPVSVLTQ----EMSKLF-LQSKNEGDKYKFFMKATQL 224
Query: 183 HCALVEKSSKLKTIECT---VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
+ S +KT E T +++ + L +LK + E+++ E + E+ + +E +K
Sbjct: 225 EQMKEDYSYIMKTKENTRLQIEQGVERLKELKRIYCEEKERYESIECVNEMQKHLEELKH 284
Query: 240 KLPW 243
K+ W
Sbjct: 285 KMAW 288
Score = 88 (36.0 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 44/216 (20%), Positives = 99/216 (45%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE----DDINTALA 704
R++ED A + +K+ E + +Q E RK E+ + +++ E I+++ +DI +
Sbjct: 747 RVLEDVAEENKKKMETVKQEMQEESRKMEELNEILRAAEKRFEEIKEKMSQVEDITNPIK 806
Query: 705 KLVDQAADLNIQQFKYAIEI-KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
+D+A D ++ + ++ ++ E ++C +KH + AK +ELE Q
Sbjct: 807 DELDKA-DSEVENRRRRLQYYEDKKKEHLTC----IKKHKELLA--AKEKELEEKTAQAR 859
Query: 764 KL---ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
++ ++ S + E+ R+ + K + T E+ + FL+ E+ +
Sbjct: 860 QIYSERIEVSRTVKSLDAEMNRLRERIKTEKSHRGN----TEEIIQRFLDAKERYEDANS 915
Query: 821 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK 856
+ +N+ + I L + + Q + +R + LS +
Sbjct: 916 KV-NNLKKF--IRVLEEIMTQRFNIYRRFLRLLSLR 948
Score = 64 (27.6 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 38/195 (19%), Positives = 85/195 (43%)
Query: 730 EIVSCKWSYAEKHMASIEFD---AKIRELEFNLKQ-HEKLALQASLHYEDCKKEVEHCRK 785
E + C + +KH+ ++ A + E+E ++ E + + + E +++E C+
Sbjct: 267 ESIECV-NEMQKHLEELKHKMAWAVVAEMEREIQPIREGIKAEEG-NTEKFDQKLEECQI 324
Query: 786 HLSDAKRQAESIA--FITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEY 843
+++A+ Q ++I IT E E L + E +Q N L + E
Sbjct: 325 KINEAEEQCKAIQEKLITVNGEAEALHAQCMSSKAE--VQTRRKAVNEAEVLYNRVRTEL 382
Query: 844 EHRQRQIEDLSTKQEADKKELKRFLAEIDAL-KEKWLPTLRNLVAQINETFSRNFQEMAV 902
+ + E L + E KK + +E + L K++ + L+ + +++ Q+M
Sbjct: 383 KRLAKDDEQLRNRIEEMKKRAYQ-ASEPERLEKQRKITQLKEKLKALHDEEIMMGQQMDQ 441
Query: 903 AGEVSLDEHESDFDK 917
+ ++ +H+ +F K
Sbjct: 442 FQQ-AIYKHKEEFAK 455
Score = 52 (23.4 bits), Expect = 7.5e-27, Sum P(3) = 7.5e-27
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 419
E+L ++I E+ ++ Q SE E++ Q K+T Q ++LK + D+
Sbjct: 390 EQLRNRIEEM----KKRAYQASEPERLEKQRKIT--QLKEKLKALHDE 431
Score = 49 (22.3 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 17/87 (19%), Positives = 45/87 (51%)
Query: 369 DKIEKLGSQILELGVQANQKRLQ------KSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
D+I+ + ++LE + N+K+++ + E K+ N++ LR R +++++K ++
Sbjct: 739 DEIQYMDIRVLEDVAEENKKKMETVKQEMQEESRKMEELNEI-LRAAEKRFEEIKEKMSQ 797
Query: 423 LLHALRNSGAENIFEAYCWLQQHRHEL 449
+ + N + + +A ++ R L
Sbjct: 798 V-EDITNPIKDELDKADSEVENRRRRL 823
Score = 48 (22.0 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 43/199 (21%), Positives = 77/199 (38%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+ E +L K+ E++ N +IE+ K+R + +LE K + L L D+
Sbjct: 378 VRTELKRLAKDDEQLRN--RIEEMKKRAYQAS---EPERLEKQRKITQLKEKLKALHDEE 432
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA- 769
+ Q ++ I E K ++ + D K + L L+ + A +
Sbjct: 433 IMMGQQMDQFQQAIYKHKEEFAKLKREDSDVRQ---DLDGKQKHLR-ELRDSKTNAFKRF 488
Query: 770 SLHYEDCKKEVEHC-RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL-EAAIQDNIS 827
H +EVE R+ K AFI P+ + L + ++ L +A DN S
Sbjct: 489 GQHMPSLLEEVEKAYRQGQFKYKPVGPLGAFIHPKDPELSLAIEACLKTLVQAFCCDNHS 548
Query: 828 QANSIFFLNQNILQEYEHR 846
+ Q ++ +Y R
Sbjct: 549 DERIL----QQLMSKYYPR 563
Score = 43 (20.2 bits), Expect = 9.9e-14, Sum P(3) = 9.9e-14
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 385 ANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFE 437
A+Q+RL +E E + QN+ L K+++ K + A + EN+ E
Sbjct: 692 ASQQRLSSTENE--IKQNESHLHHHRQHQKELQIKIRRT--AAEIADLENVDE 740
>UNIPROTKB|Q802R8 [details] [associations]
symbol:smc6 "Structural maintenance of chromosomes protein
6" species:31033 "Takifugu rubripes" [GO:0000722 "telomere
maintenance via recombination" evidence=ISS] [GO:0000781
"chromosome, telomeric region" evidence=ISS] [GO:0016605 "PML body"
evidence=ISS] [GO:0030915 "Smc5-Smc6 complex" evidence=ISS]
[GO:0090398 "cellular senescence" evidence=ISS] InterPro:IPR027132
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0016605
GO:GO:0006281 GO:GO:0000781 GO:GO:0000722 GO:GO:0090398
eggNOG:COG1196 GO:GO:0030915 PANTHER:PTHR19306:SF2 CTD:79677
OrthoDB:EOG44QT04 EMBL:AJ543330 RefSeq:NP_001027868.1
UniGene:Tru.1990 ProteinModelPortal:Q802R8 GeneID:446077
KEGG:tru:446077 InParanoid:Q802R8 Uniprot:Q802R8
Length = 1090
Score = 202 (76.2 bits), Expect = 6.4e-26, Sum P(3) = 6.4e-26
Identities = 81/303 (26%), Positives = 138/303 (45%)
Query: 21 GNIIEIELHNFMTFDHLICKP---GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
G + I L+NFM H P GS +N ++G NGSGKS+++ + +ALGG+ Q R
Sbjct: 53 GIVKSITLNNFMC--HANLGPFAFGSNVNFIVGKNGSGKSAILTGLIVALGGNAQATNRG 110
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEH--------LTIMRKIDTRNKSEWFF----NGK 125
+S+ +VK GE + I+L K+ + + I +KI TR + +G
Sbjct: 111 SSLKGFVKEGESFAVVSITLNNIGKDAYKPEVYGQAIVIDQKI-TREGIRTYKLKSQSGH 169
Query: 126 VVP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQH 183
++ K +++ I +NIQVNN L Q+ F L E+ + + QL
Sbjct: 170 IISTKKEDLVTILDYYNIQVNNPVTILTQEMSKYF--LHSKGGAEKYKFFMKATQLEQMK 227
Query: 184 CALVE-KSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLP 242
V KS+K T++ V+++ + L LK +E+E + + E+ K+E +KK++
Sbjct: 228 DDFVHIKSTKSVTVD-KVEQHSECLKDLKRDYLEKEDRYKSLASVNEMYTKLEELKKQMA 286
Query: 243 WLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIE---GK-KQEKAILDGDCKKL 298
W + E+ + E+ K +E GK KQ L+ +++
Sbjct: 287 WALVGEVEKEFEPMKEKLESDRCATNKFNEKVDEWKKKVEVAEGKQKQSHEQLEEITQQV 346
Query: 299 SSL 301
S L
Sbjct: 347 SEL 349
Score = 182 (69.1 bits), Expect = 6.4e-26, Sum P(3) = 6.4e-26
Identities = 99/394 (25%), Positives = 165/394 (41%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
QTEQ+ E + KLQ E ++ N+ + + E+ K E+ E+E + L
Sbjct: 713 QTEQKTTEVKTMKLQLELTDLKNVEEPQSEDLAEL-------KSAFENAEQEYKQHKQLI 765
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 764
+ AD+ + K +L I+ W + + E +E+ K HEK
Sbjct: 766 DTAAEEADVKKVETKLTPLFTSLSCNIL---WVHCLFVLLQEELSKTDQEV-MKCKHHEK 821
Query: 765 LALQASLHYEDCKKEVEHCR-KHL-----SDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
HYE+ ++ C K L S K ESIA E+ E L + T L
Sbjct: 822 -------HYEE-RRNAHLCSIKTLENNVASKEKELQESIAK-AKEICPEQLVVRRTARSL 872
Query: 819 EAAI---QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
+ I + I+ + I++EY H +E + K + K L F+ +D +
Sbjct: 873 DVEITRLKVKIATQREHQGDREEIVREY-HEA--LESYANKAQ-QIKNLNNFIKCLDRVM 928
Query: 876 EKWL---PTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQ 931
++ L LR L A+ F + G ++ D H+++ + I V+ Q +
Sbjct: 929 DQRLYAYTVLRRFLSARCKYYFDSMLAQRGFTGNMTFD-HKNET----LSISVQPGQGNK 983
Query: 932 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL-VRAA 990
++ SGGERS ST+ +++SL +T PFR +DE + MD N R +Q ++ A
Sbjct: 984 ADLNDMRCLSGGERSFSTVCFVLSLWPITEAPFRCLDEFDVYMDMANRRNTQRQSGLKMA 1043
Query: 991 SQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1024
+ Q LTP+ + L I+ + N P
Sbjct: 1044 TSQKIRQLIFLTPQSMSSLPECRRIHIVQL-NDP 1076
Score = 55 (24.4 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 34/179 (18%), Positives = 78/179 (43%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E + + ++ EEI V + K E + + R L+S E + A+ +
Sbjct: 329 EGKQKQSHEQLEEITQQVSELQSKCTEFKTEVQRRNADLKSCEVTVHRHKAILR------ 382
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI-EFDAKIRELEFN-------LKQHE 763
DL + + + +I +L + I + ++ M I + +A + +L + ++Q++
Sbjct: 383 DLEKDKAQLSSKINDLSLSISQATGAESQARMERIAQIEAALEDLTHHTSTLGQQIEQYQ 442
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESI-AFITPELEKEFLEMPTTIEELEAA 821
A K+E+E +K + +RQ +S+ + + L++ +MP + ++ A
Sbjct: 443 HSYRHAIEGQGKMKRELEGLQKSIDANRRQLQSMESSRSNRLQRFGDQMPALLAAIDEA 501
Score = 53 (23.7 bits), Expect = 6.4e-26, Sum P(3) = 6.4e-26
Identities = 37/165 (22%), Positives = 71/165 (43%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
H+++E++ Q+ EL + + + + + L ++T+ + L+D+E K+ L +
Sbjct: 336 HEQLEEITQQVSELQSKCTEFKTEVQRRNADLKSCEVTVHRHKAILRDLE-KDKAQLSSK 394
Query: 428 RNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHY--IWKSFI 485
N + +I +A Q R E + A LE ++++ H + L + Y ++ I
Sbjct: 395 INDLSLSISQATGAESQARME--RIAQIEAALE-DLTH--HTSTLGQQIEQYQHSYRHAI 449
Query: 486 TQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQ-ISEEMRAL 529
+ L K D S ESSR Q ++M AL
Sbjct: 450 EGQGKMKRELEGLQKSIDANRRQLQSMESSRSNRLQRFGDQMPAL 494
Score = 53 (23.7 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 21/110 (19%), Positives = 52/110 (47%)
Query: 799 FITPELEKEFLEMPTTIE--ELEAA-IQDNISQANSIFFLNQNILQEYEHRQRQIEDLST 855
F++ ++E+ + +E +++AA IQ I + NQ++L+ + Q+ E +
Sbjct: 665 FLSKDVEEGIRHLKREMETQKVQAAHIQQQIRSTDKNISENQDLLRRTQTEQKTTEVKTM 724
Query: 856 KQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGE 905
K + + +LK ++ + + L L++ + + ++ Q + A E
Sbjct: 725 KLQLELTDLKN----VEEPQSEDLAELKSAFENAEQEYKQHKQLIDTAAE 770
Score = 41 (19.5 bits), Expect = 7.5e-24, Sum P(4) = 7.5e-24
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 383 VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
VQA + Q +K +++N+ LR+ K E K KL
Sbjct: 686 VQAAHIQQQIRSTDKNISENQDLLRRTQTEQKTTEVKTMKL 726
Score = 41 (19.5 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 21/111 (18%), Positives = 42/111 (37%)
Query: 768 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 827
+A+ +D ++ + H ++ + K QA I +K E + + Q
Sbjct: 662 RANFLSKDVEEGIRHLKREMETQKVQAAHIQQQIRSTDKNISENQDLLRRTQTE-QKTTE 720
Query: 828 QANSIFFLNQNILQEYEHRQRQ-IEDLSTKQEADKKELKRFLAEIDALKEK 877
L L+ E Q + + +L + E ++E K+ ID E+
Sbjct: 721 VKTMKLQLELTDLKNVEEPQSEDLAELKSAFENAEQEYKQHKQLIDTAAEE 771
Score = 41 (19.5 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 214 NVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
N+ + +D+ R Q + +V++MK +L D+K E
Sbjct: 701 NISENQDLLRRTQTEQKTTEVKTMKLQLELT--DLKNVE 737
Score = 39 (18.8 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 43/188 (22%), Positives = 77/188 (40%)
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
A + + + I+ K +E + + + + +K+++ E +R + K E
Sbjct: 663 ANFLSKDVEEGIRHLKREMETQKVQAAHIQQQIRSTDKNIS--ENQDLLRRTQTEQKTTE 720
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELE-KEFLEMPTTIEELEAAI 822
++ L D K E + L++ K AF E E K+ ++ T E EA +
Sbjct: 721 VKTMKLQLELTDLKNVEEPQSEDLAELKS-----AFENAEQEYKQHKQLIDTAAE-EADV 774
Query: 823 QDNISQANSIFF-LNQNILQEYEHRQRQIEDLS-TKQEADK-KELKRFLAEIDALKEKWL 879
+ ++ +F L+ NIL + E+LS T QE K K ++ E +
Sbjct: 775 KKVETKLTPLFTSLSCNILWVHCLFVLLQEELSKTDQEVMKCKHHEKHYEERRNAHLCSI 834
Query: 880 PTLRNLVA 887
TL N VA
Sbjct: 835 KTLENNVA 842
Score = 39 (18.8 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR S + K + R EE D R++ + +V+P G+V ++ +I +N
Sbjct: 3 KRKSISTHDKSTKRARPVEEEED-SEDADDRDQDVERLSPQVLPSGDVSDVGIVKSITLN 61
Query: 145 N 145
N
Sbjct: 62 N 62
Score = 37 (18.1 bits), Expect = 7.5e-24, Sum P(4) = 7.5e-24
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 275 HEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLE 314
H + IEG+ + K L+G L I+ N +R++ +E
Sbjct: 443 HSYRHAIEGQGKMKRELEG----LQKSIDAN-RRQLQSME 477
>ZFIN|ZDB-GENE-070705-287 [details] [associations]
symbol:si:dkey-119f1.1 "si:dkey-119f1.1"
species:7955 "Danio rerio" [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0030915 "Smc5-Smc6
complex" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR027132 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-070705-287 eggNOG:COG1196 EMBL:BX927289
PANTHER:PTHR19306:SF2 HOGENOM:HOG000286038 HOVERGEN:HBG093964
OrthoDB:EOG44QT04 GeneTree:ENSGT00550000074816 IPI:IPI00504950
RefSeq:NP_001121806.1 UniGene:Dr.94251 Ensembl:ENSDART00000081633
GeneID:557127 KEGG:dre:557127 OMA:YYSSERT NextBio:20881833
Uniprot:A5PN27
Length = 1090
Score = 201 (75.8 bits), Expect = 8.2e-26, Sum P(3) = 8.2e-26
Identities = 75/241 (31%), Positives = 119/241 (49%)
Query: 23 IIE-IELHNFMTFDHLICKP---GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRAT 78
IIE I L NFM H + P G +N V+G NGSGKS+++ A+ +ALGG R +
Sbjct: 51 IIESISLRNFMC--HSLLGPFAFGPNVNFVVGNNGSGKSAVLTALIVALGGKALTTNRGS 108
Query: 79 SIGAYVKRGEESGYIKISLRG---DT-KEEHLTIMRKIDTRNKSEWF-------FNGKVV 127
S+ +VK GE S + I+LR D K E +D R SE G++V
Sbjct: 109 SLKGFVKEGESSADVSITLRNRGRDAYKPEKFGQSIVVDLRISSEGIRTYKLKSHTGQLV 168
Query: 128 P--KGEVLEITKRFNIQVNNLTQFLPQDRVCEF--AKLSPVKLLEETEKAVGDPQLPVQH 183
K E++ I FNIQV+N L Q+ F +K K + KA Q+ +
Sbjct: 169 SAKKEELVSILDHFNIQVDNPVSILTQEMSKHFLHSKGEGDKY-KFFMKATQLDQMKEDY 227
Query: 184 CALVEKSSKLKTI-ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLP 242
++ K KT+ + TV+++ +TL +LK ++E+ + + E+ +K+ +K ++
Sbjct: 228 SYIM----KTKTLTQNTVEKHRETLLELKQKFRDKEERYKSLASLDEMQQKLNELKNQMA 283
Query: 243 W 243
W
Sbjct: 284 W 284
Score = 177 (67.4 bits), Expect = 8.2e-26, Sum P(3) = 8.2e-26
Identities = 77/382 (20%), Positives = 158/382 (41%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDI---NTAL 703
+++ +++ + KLQ E E+ N+ + + + +E + ++ +E + T
Sbjct: 714 DRKKVQERSRKLQAELTELQNVEEPQSEDLKPLEEELEELSGRISVCGEEFEALRRQTQT 773
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
K + A+ +Q K A+ N +VE V E+ S D ++ + + K +E
Sbjct: 774 CKKEYEEAEKVFRQKKEAV---NSIVEEVE---PIKERLNNS---DQEVERSKHHRKHYE 824
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
+ E K + + L A +A I ++ + + + I L++ I
Sbjct: 825 EKRKTHLQMIETLKTSLNQKEQELQAAIAKASEICPERSDVRRTAKSLDSEINRLKSKIN 884
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 883
Q I++EY + + +S +Q L++I + +R
Sbjct: 885 TQQDQQGH----RDTIVREYHEAREKFGKIS-RQVKGLDAFIHQLSKIMTTRHNVYAEMR 939
Query: 884 N-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSG 942
L + F + G++ D H+++ + I V+ + G+ ++ SG
Sbjct: 940 MYLSVRCKYNFHSMLSQRGYKGKMIFD-HKNEI----LSISVQPGEGGKADLSDMRSLSG 994
Query: 943 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLT 1002
GERS ST+ +++SL ++ PFR +DE + MD +N R +++ A+ Q LT
Sbjct: 995 GERSFSTVCFVLSLWEIAEVPFRALDEFDVYMDMVNRRISMDMMLKIAASQRYRQFIFLT 1054
Query: 1003 PKLLPDLEYSEACSILNIMNGP 1024
P+ + L + +L + N P
Sbjct: 1055 PQNMSSLPINSLIRVLRL-NDP 1075
Score = 76 (31.8 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 45/234 (19%), Positives = 102/234 (43%)
Query: 651 IEDEAAKLQKEREEIINIVQIE-KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 709
+++ KL + + ++ + E +++ + M+ I +R +++ + + K VD+
Sbjct: 268 LDEMQQKLNELKNQMAWALVAEMEQEMKPMKEQITAEERS--TVKYDQKVEEWKGK-VDE 324
Query: 710 AADLNIQ---QFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 765
A ++ Q Q + E ++ L E K E++ +A + NL+ EK
Sbjct: 325 ANKISKQLQDQLESVSERMQQLQPECSELKSRVQERNRELKTAEAALHRKRTNLRDLEKD 384
Query: 766 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEK-EFLE--MPTTIEELEAAI 822
Q + ++ K + +D + + E + I ELE+ F + + I++ + A
Sbjct: 385 KDQLNKRIKELKHSISQMNS--ADTQARVEKMNHIQAELEELSFRDSTLAQQIDQFKQAC 442
Query: 823 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
+ + + Q++ + + +QR DL+ + + +L+RF I AL E
Sbjct: 443 ESAKERHARMSRERQDLQRAIDSKQR---DLAAMESSRNNQLRRFGEHIPALME 493
Score = 71 (30.1 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 25/146 (17%), Positives = 69/146 (47%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTA 702
+Q + + + +LQ E E+ + VQ R+ + E ++ ++ L +EK+ D +N
Sbjct: 332 LQDQLESVSERMQQLQPECSELKSRVQERNRELKTAEAALHRKRTNLRDLEKDKDQLNKR 391
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+ +L + +N + +E N + + + S+ + +A + D + E ++H
Sbjct: 392 IKELKHSISQMNSADTQARVEKMNHIQAELE-ELSFRDSTLAQ-QIDQFKQACESAKERH 449
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLS 788
+++ + +D ++ ++ ++ L+
Sbjct: 450 ARMSRER----QDLQRAIDSKQRDLA 471
Score = 58 (25.5 bits), Expect = 8.2e-26, Sum P(3) = 8.2e-26
Identities = 40/189 (21%), Positives = 89/189 (47%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME-DKN--NKLLH 425
D++E + ++ +L + ++ + + E+ + L + L + L+D+E DK+ NK +
Sbjct: 334 DQLESVSERMQQLQPECSELKSRVQERNRELKTAEAALHRKRTNLRDLEKDKDQLNKRIK 393
Query: 426 ALRNSGAE-NIFEAYCWLQQHRH---ELNKEAYGPVLL--EVNVSNRAHANYLEDHVGHY 479
L++S ++ N + +++ H EL + ++ L +++ +A + E H
Sbjct: 394 ELKHSISQMNSADTQARVEKMNHIQAELEELSFRDSTLAQQIDQFKQACESAKERHARMS 453
Query: 480 IWKSFITQ--DAGDRDFLA----KN--LKPFD--VPILNYVSNESSRKEPFQISEEMRAL 529
+ + + D+ RD A +N L+ F +P L +E+ + F++ + + L
Sbjct: 454 RERQDLQRAIDSKQRDLAAMESSRNNQLRRFGEHIPALMEAIDEAHHRGKFRM-KPVGPL 512
Query: 530 GISARL-DQ 537
G RL DQ
Sbjct: 513 GFCIRLRDQ 521
Score = 57 (25.1 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 24/119 (20%), Positives = 59/119 (49%)
Query: 782 HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI---QDNISQANSIFFLNQN 838
+ ++ S + +A+ +++ ++E+E + + ++ A + Q ++ Q NQ
Sbjct: 650 YTNRYYSSEQHRAQ---YLSRDVEEEIRHLQSALQTQRAQLDRFQQDMQQVGEEERQNQT 706
Query: 839 ILQE-YEHRQRQIEDLSTKQEADKKELKRFLA-EIDALK--EKWLPTLRNLVAQINETF 893
+L+ Y+ R++ +++ S K +A+ EL+ + + LK E+ L L ++ E F
Sbjct: 707 LLRRAYDDRKK-VQERSRKLQAELTELQNVEEPQSEDLKPLEEELEELSGRISVCGEEF 764
Score = 49 (22.3 bits), Expect = 7.0e-25, Sum P(3) = 7.0e-25
Identities = 48/259 (18%), Positives = 111/259 (42%)
Query: 359 QTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKDM 416
+++ + + K+ +L +Q + + A ++ K KE+I + + T++ Q + K
Sbjct: 263 KSLASLDEMQQKLNELKNQ-MAWALVAEMEQEMKPMKEQITAEERSTVKYDQKVEEWKGK 321
Query: 417 EDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHV 476
D+ NK+ L++ E++ E +QQ + E ++ L+ V R +
Sbjct: 322 VDEANKISKQLQDQ-LESVSER---MQQLQPECSE-------LKSRVQERNRELKTAEAA 370
Query: 477 GHYIWKSFITQDAGDRDFLAKNLKPFDVPI--LNYVSNESSRKEPFQISEEMRALG---- 530
H ++ + D+D L K +K I +N ++ ++ I E+ L
Sbjct: 371 LHRK-RTNLRDLEKDKDQLNKRIKELKHSISQMNSADTQARVEKMNHIQAELEELSFRDS 429
Query: 531 -ISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRW 589
++ ++DQ A + KE ++ + + + D K ++A + E+
Sbjct: 430 TLAQQIDQFKQACESAKE-RHARMSRERQDL-QRAIDSKQRDLAAM--------ESSRNN 479
Query: 590 SISRYGGHVSASVEPVNQS 608
+ R+G H+ A +E ++++
Sbjct: 480 QLRRFGEHIPALMEAIDEA 498
Score = 48 (22.0 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 33/156 (21%), Positives = 66/156 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTA 702
+Q + ++ L++E EE+ + + + + K++ E EK A
Sbjct: 732 LQNVEEPQSEDLKPLEEELEELSGRISVCGEEFEALRRQTQTCKKEYEEAEKVFRQKKEA 791
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSC-KWSYAEKHMASIEFDAKIRELEFNLKQ 761
+ +V++ ++ K + + VE + Y EK ++ I L+ +L Q
Sbjct: 792 VNSIVEE-----VEPIKERLNNSDQEVERSKHHRKHYEEKRKTHLQM---IETLKTSLNQ 843
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESI 797
E+ LQA++ K E C + SD +R A+S+
Sbjct: 844 KEQ-ELQAAI-----AKASEICPER-SDVRRTAKSL 872
Score = 48 (22.0 bits), Expect = 9.6e-09, Sum P(3) = 9.6e-09
Identities = 35/163 (21%), Positives = 67/163 (41%)
Query: 154 RVCEFAKLSPVKLLEETEKAVGDPQLPVQ-HCA-----LVEKSSKLKTIECTVKRNGDTL 207
+V E K+S K L++ ++V + +Q C+ + E++ +LKT E + R L
Sbjct: 321 KVDEANKIS--KQLQDQLESVSERMQQLQPECSELKSRVQERNRELKTAEAALHRKRTNL 378
Query: 208 NQLKALNVEQEKDVERVRQRA-ELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXX 266
L EKD +++ +R EL + M + ++K +I
Sbjct: 379 RDL-------EKDKDQLNKRIKELKHSISQMNSADTQAR--VEKMNHIQAELEELSFRDS 429
Query: 267 XXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRR 309
+ +F + E K+ A + + + L I+ SK+R
Sbjct: 430 TLA--QQIDQFKQACESAKERHARMSRERQDLQRAID--SKQR 468
Score = 45 (20.9 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 387 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
Q Q E+E+ QN+ LR+ D K +++++ KL
Sbjct: 692 QDMQQVGEEER---QNQTLLRRAYDDRKKVQERSRKL 725
Score = 42 (19.8 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 13/64 (20%), Positives = 33/64 (51%)
Query: 365 EPPHDKIEKLGSQILELG--VQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDME 417
+P +++E+L +I G +A +++ Q +KE K+ Q K + + ++ ++
Sbjct: 744 KPLEEELEELSGRISVCGEEFEALRRQTQTCKKEYEEAEKVFRQKKEAVNSIVEEVEPIK 803
Query: 418 DKNN 421
++ N
Sbjct: 804 ERLN 807
>TAIR|locus:2161163 [details] [associations]
symbol:MIM "AT5G61460" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA;IMP] [GO:0007062 "sister
chromatid cohesion" evidence=RCA;IMP] [GO:0010165 "response to
X-ray" evidence=IMP] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009555 "pollen development" evidence=RCA]
[GO:0016444 "somatic cell DNA recombination" evidence=RCA]
[GO:0016568 "chromatin modification" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0031048 "chromatin
silencing by small RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR027132 EMBL:CP002688 GenomeReviews:BA000015_GR
HSSP:P58301 GO:GO:0000724 GO:GO:0010165 GO:GO:0007062
eggNOG:COG1196 PANTHER:PTHR19306:SF2 OMA:CANEANY EMBL:AB016887
IPI:IPI00530052 RefSeq:NP_200954.1 UniGene:At.8630
ProteinModelPortal:Q9FII7 SMR:Q9FII7 STRING:Q9FII7 PaxDb:Q9FII7
PRIDE:Q9FII7 EnsemblPlants:AT5G61460.1 GeneID:836267
KEGG:ath:AT5G61460 TAIR:At5g61460 HOGENOM:HOG000030109
InParanoid:Q9FII7 PhylomeDB:Q9FII7 ProtClustDB:CLSN2686921
Genevestigator:Q9FII7 Uniprot:Q9FII7
Length = 1057
Score = 217 (81.4 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 144/672 (21%), Positives = 275/672 (40%)
Query: 369 DKIEKLGSQILE----LGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
+K+E L S++ E +A + R + E ++ ++ R + + D++ +
Sbjct: 390 EKVETLRSRLKEEENCFLEKAFEGRKKMEHIEDMIKNHQKRQRFITSNINDLKKHQTNKV 449
Query: 425 HALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN-RAHANYLEDHVGHYIWKS 483
A N+ +A ++++ K GP+ V + N A+ +E +G + +
Sbjct: 450 TAFGGDRVINLLQA---IERNHRRFRKPPIGPIGSHVTLVNGNKWASSVEQALGTLL-NA 505
Query: 484 FITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPH 543
FI D D L + L + + SR I M + V D+ +
Sbjct: 506 FIVTDHKDSLTLRGCANEANYRNLKIIIYDFSRPR-LNIPRHMVPQTEHPTIFSVIDSDN 564
Query: 544 -AVKEVLISQFGLDSSYIGSKETDQKADNVAKL--GILDFWTPENHYRWSISRYGGHVSA 600
V VL+ Q G++ + + KA K + + +T + + + + G V
Sbjct: 565 PTVLNVLVDQSGVERQVLAENYEEGKAVAFGKRLSNLKEVYTLDGYKMF----FRGPVQT 620
Query: 601 SVEPVNQSRLLLC-SVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQ 659
++ P+++ LC S D + + L E + +L+
Sbjct: 621 TLPPLSRRPSRLCASFDDQIKDLEIEASKEQNEINQCMRRKREAEENLEEL-ELKVRQLK 679
Query: 660 KEREEIINIVQIEKRKRREMENHINLRKRKLESI---EKEDDINTALAKLVDQAADLN-I 715
K R + ++ ++ + +++N + L S E + +I L ++ ++ A L +
Sbjct: 680 KHRSQAEKVLTTKELEMHDLKNTVAAEIEALPSSSVNELQREIMKDLEEIDEKEAFLEKL 739
Query: 716 QQFKYAIEIK-NLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS---- 770
Q E+K N L + + A E DA E E LK+ EK LQ++
Sbjct: 740 QNCLKEAELKANKLTALFENM-----RESAKGEIDA-FEEAENELKKIEK-DLQSAEAEK 792
Query: 771 LHYEDCKK-----EVEHCRKHLSDAK-RQAES---IAFITPELEKEFLEM--PTTIEELE 819
+HYE+ K ++++ + + K ++ ES + I PE E E L +T E+L
Sbjct: 793 IHYENIMKNKVLPDIKNAEANYEELKNKRKESDQKASEICPESEIESLGPWDGSTPEQLS 852
Query: 820 AAI---QDNISQANSIFFLN-QNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
A I + + N F + ++ YE +R+I K D +E + +A +AL
Sbjct: 853 AQITRMNQRLHRENQQFSESIDDLRMMYESLERKIAK-KRKSYQDHRE--KLMACKNALD 909
Query: 876 EKWLPTLRN---LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQL 932
+W RN L Q+ F+ + + ++G + + ++ + I+VK Q
Sbjct: 910 SRWAKFQRNASLLRRQLTWQFNAHLGKKGISGHIKVS-----YENKTLSIEVKMPQDATS 964
Query: 933 EVL-SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS 991
V+ SGGERS ST+ + ++L ++T PFR +DE + MD ++ + LV A
Sbjct: 965 NVVRDTKGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDALVDFAI 1024
Query: 992 QPNTPQCFLLTP 1003
+ Q +TP
Sbjct: 1025 GEGS-QWMFITP 1035
Score = 163 (62.4 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 60/244 (24%), Positives = 114/244 (46%)
Query: 21 GNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
G+I+ I++ NFM +L + G +N + G NGSGKS+++ A+ +A G + RA ++
Sbjct: 20 GSILRIKVENFMCHSNLQIEFGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATL 79
Query: 81 GAYVKRGEESGYIKISLRGDTKEEH--------LTIMRKID---TRNKSEWFFNGKVVPK 129
++K G +++ ++ ++ + I R+I T + + KV K
Sbjct: 80 KDFIKTGCSYAVVQVEMKNSGEDAFKPEIYGGVIIIERRITESATATVLKDYLGKKVSNK 139
Query: 130 -GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK-LLEETEKAVGDPQLPVQHCALV 187
E+ E+ + FNI V N + QD+ EF K + KA Q+ ++
Sbjct: 140 RDELRELVEHFNIDVENPCVVMSQDKSREFLHSGNDKDKFKFFFKATLLQQVNDLLQSIY 199
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL-KY 246
E +K I V +T+ ++ E ++ + Q E+ ++++ +KKKL W Y
Sbjct: 200 EHLTKATAI---VDELENTIKPIEKEISELRGKIKNMEQVEEIAQRLQQLKKKLAWSWVY 256
Query: 247 DMKK 250
D+ +
Sbjct: 257 DVDR 260
Score = 63 (27.2 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 46/208 (22%), Positives = 88/208 (42%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA-LAKLVDQ 709
+ D +LQ++ E+I+ + K + + I+ K+ES+ A +A L+D+
Sbjct: 255 VYDVDRQLQEQTEKIVKL----KERIPTCQAKIDWELGKVESLRDTLTKKKAQVACLMDE 310
Query: 710 AADLN--IQQF----KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
+ + I+ F K A+ K L E + K +Y +K ++R LE +Q
Sbjct: 311 STAMKREIESFHQSAKTAVREKIALQEEFNHKCNYVQK------IKDRVRRLE---RQVG 361
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
+ Q + + + E+E K+L + E++ E E FLE + I+
Sbjct: 362 DINEQTMKNTQAEQSEIEEKLKYLEQEVEKVETLRSRLKEEENCFLEKAFEGRKKMEHIE 421
Query: 824 DNI-SQANSIFFLNQNILQEYEHRQRQI 850
D I + F+ NI +H+ ++
Sbjct: 422 DMIKNHQKRQRFITSNINDLKKHQTNKV 449
Score = 56 (24.8 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 184 CALVEK-SSKLKTIECTVKRNGDTLNQ-LKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
C V+K +++ +E V GD Q +K EQ + E+++ + +EKVE+++ +L
Sbjct: 343 CNYVQKIKDRVRRLERQV---GDINEQTMKNTQAEQSEIEEKLKYLEQEVEKVETLRSRL 399
Score = 55 (24.4 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 142 QVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
QVN+L Q + + K + + ++E E + P++ + E K+K +E V+
Sbjct: 190 QVNDLLQSIYE----HLTKATAI--VDELENTIK----PIEK-EISELRGKIKNME-QVE 237
Query: 202 RNGDTLNQLKA-LNVEQEKDVERVRQRAELLEKVESMKKKLP 242
L QLK L DV+R Q E EK+ +K+++P
Sbjct: 238 EIAQRLQQLKKKLAWSWVYDVDR--QLQEQTEKIVKLKERIP 277
Score = 47 (21.6 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINI-VQIEKRKRREMENHINLRKRKLESIE 694
Q EQ IE++ L++E E++ + ++++ + +E RK K+E IE
Sbjct: 372 QAEQSEIEEKLKYLEQEVEKVETLRSRLKEEENCFLEKAFEGRK-KMEHIE 421
Score = 43 (20.2 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 969 EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEA 1014
EI+ + NE K ++ +++A ++ K+LPD++ +EA
Sbjct: 767 EIDAFEEAENELKKIEKDLQSAEAEKIHYENIMKNKVLPDIKNAEA 812
>DICTYBASE|DDB_G0288993 [details] [associations]
symbol:smc6 "AAA ATPase domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030915 "Smc5-Smc6
complex" evidence=IEA;ISS] [GO:0006281 "DNA repair"
evidence=IEA;ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR027132 InterPro:IPR003395 dictyBase:DDB_G0288993
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GenomeReviews:CM000154_GR GO:GO:0006310 EMBL:AAFI02000129
GO:GO:0046982 eggNOG:COG1196 GO:GO:0030915 HSSP:P32908
RefSeq:XP_636454.1 ProteinModelPortal:Q54I56
EnsemblProtists:DDB0231143 GeneID:8626906 KEGG:ddi:DDB_G0288993
OMA:ISANIFT ProtClustDB:CLSZ2730382 PANTHER:PTHR19306:SF2
Uniprot:Q54I56
Length = 1185
Score = 199 (75.1 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 138/690 (20%), Positives = 290/690 (42%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSE----KEKIL--NQNKLTLRQCSDR-LKDMEDKNN 421
D+I+K G Q L+L + + +K + +E + +QN+ T+ Q +R + + + N
Sbjct: 504 DEIKKKGQQKLQLEARKEELIKEKEDLMRDRENLKRDHQNQRTITQQMNREYEGLRVQLN 563
Query: 422 KLLHALRNSG---AENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGH 478
L + + + + ++ R +K GP+ L + + N + A +E +
Sbjct: 564 NLRSTQKGENQAYGKGMTDFLHKIEASRRNFSKLPIGPIGLSLKIKNESWAFAIESAISK 623
Query: 479 YIWKSFITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQV 538
++F+ D L K F + + +Y + E ++ E A + +V
Sbjct: 624 ATLRNFLVFSIPDGITLQKLGHQFGIKV-DYTKIPETT-EVYKTVEHDELDPSLATVLRV 681
Query: 539 FDAP-HAVKEVLISQFGLDSSYIGS--KETDQK--ADNVAKLGILDFWTPENHYRWSISR 593
D+P H + LI ++ +G+ KE D D + G+ F+ P+ + +S ++
Sbjct: 682 LDSPSHFIINFLIDTKKVEQIGLGNDRKEIDSVLYTDRCPR-GLSQFFDPQGN-NYSKTK 739
Query: 594 YGGHVSASVEPVNQSRLLLCSVDG---NXXXXXXXXXXXXXXXXXXXXXXXXXMQT-EQR 649
G + + ++ +L + D +Q E +
Sbjct: 740 SGNPFYQAAKNSGEATMLRVNSDAAIQRTQRDMESKLPALNQQKKIEQELSSDVQAIEHK 799
Query: 650 LIEDEAAKLQKERE--EIIN-IVQIEKRKRREMENHINLRKRKLESIEKE-----DDINT 701
+ +++ + Q R+ +I N I IE ++ +++ L + L S+++E ++IN
Sbjct: 800 ISQNDQDQNQCSRKILQITNEIKSIEDTLVQQTDDYSEL-EIGLASLDEEIKSMDEEINI 858
Query: 702 ALAKLVDQAADLNIQQFKYAIEIKNL--LVEIVSCKWSYAEKHMASIEFDAKIRELEFN- 758
A+ + AA Q+ +A + L ++++S + E ++ +F+ +R+L N
Sbjct: 859 QKAQRTEVAA----QKGPFAENNRALDDQIDVLSNQLGNIENNLR--KFNEGLRKLNNNK 912
Query: 759 ---LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE----LEKEFLEM 811
L+Q + A + + ++ +E ++ A + E I T E L + ++
Sbjct: 913 QALLQQQGRSAQERDQFKAEYQRILEIVKEKTDKATQICERIEIPTNETNTTLTNKIIQY 972
Query: 812 PTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 871
+E+ E+ + + ++A +F N L+E ++ IE+L+T E + E R+
Sbjct: 973 TKQLEK-ESRGKRSRTEALKLFQDANNSLKEISEQRDNIEELATILERNLNE--RY---- 1025
Query: 872 DALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIK-VKFRQSG 930
+KW ++ + ++ F+ + G ++ D D L K + Q+G
Sbjct: 1026 ----KKWQRFRLSISRRSDQYFNIFLSKKGYTGSLTFDHQNGKLDINVELQKALPSNQNG 1081
Query: 931 QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAA 990
+ SGGERS ST+ L++ + CPFR +DE + MD +N L+ A
Sbjct: 1082 TAKG-DTKGLSGGERSFSTVSLLLAFWENMECPFRAMDEFDVFMDEVNRSISINLLMSKA 1140
Query: 991 SQPNTPQCFLLTPKLLPDLEYSEACSILNI 1020
+ + Q +TP L ++ SE + +
Sbjct: 1141 EENRSKQYIFVTPLALNHIKTSEYVKVFRV 1170
Score = 170 (64.9 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 64/253 (25%), Positives = 109/253 (43%)
Query: 5 RVKRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIA 64
R ++LK E + G I I L NFM H S +N + G NGSGKS+++ A+
Sbjct: 133 REQQLKSGVTEPE--AGIIESITLENFMCHRHFKLDFCSNVNFIAGENGSGKSAVLIALI 190
Query: 65 LALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKE--------EHLTIMRKIDTRN 116
+ LG R + + VK + I + LR +E + + I R+I
Sbjct: 191 VCLGAKAGFTNRGSKLSDLVKAETNTAVITVKLRNQGQEAFKPEKYGKSVIIERRISRTG 250
Query: 117 KSEWF---FNGKVVPK--GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLS-PVKLLEET 170
S + +NGK V +V I ++FNIQ++N L QD +F + P +
Sbjct: 251 SSGYKVKDYNGKTVSDKFNDVSLILEQFNIQIDNPMSILTQDTSRQFLNSAGPQDKYKSF 310
Query: 171 EKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAEL 230
A ++ + + E K+K + + + + +L+ E K+ + ++Q L
Sbjct: 311 LMATQLDKMTKDYTTIREHIDKIKDM---LSQKVVVIQELEKKVREYNKEYKDLQQMVGL 367
Query: 231 LEKVESMKKKLPW 243
K+ K +L W
Sbjct: 368 ERKISEFKNQLAW 380
Score = 98 (39.6 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 50/226 (22%), Positives = 100/226 (44%)
Query: 658 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQ 716
++ ERE Q+ + + R +N I +E+ K +DI + + DQ + IQ
Sbjct: 384 VESEREAKRKEKQVAEAEERSFDNDIRKVDETIETYNKSIEDIKKDIKEFTDQ---IKIQ 440
Query: 717 QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDC 776
+ K E N EI++ + A K IE + K R+ KQ L LQ+ ++
Sbjct: 441 EQKK--ETNNR--EILTIEREEA-KIQTQIEANNKKRQQR---KQRRHLQLQSINEIKER 492
Query: 777 KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLN 836
++ + + L + K++ + + E+ E + + E +D+ +Q +
Sbjct: 493 NAQLANNQSKLDEIKKKGQQKLQLEARKEELIKEKEDLMRDRENLKRDHQNQRT----IT 548
Query: 837 QNILQEYEHRQRQIEDLSTKQEADK----KELKRFLAEIDALKEKW 878
Q + +EYE + Q+ +L + Q+ + K + FL +I+A + +
Sbjct: 549 QQMNREYEGLRVQLNNLRSTQKGENQAYGKGMTDFLHKIEASRRNF 594
Score = 82 (33.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 37/186 (19%), Positives = 88/186 (47%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTAL 703
+ E+R +++ K+ + E ++ K+ +E + I ++++K E+ +E I
Sbjct: 399 EAEERSFDNDIRKVDETIETYNKSIEDIKKDIKEFTDQIKIQEQKKETNNREILTIEREE 458
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
AK+ Q + N ++ + + ++L ++ ++ E++ +K+ E++ K +
Sbjct: 459 AKIQTQI-EANNKKRQQRKQRRHLQLQSIN---EIKERNAQLANNQSKLDEIK--KKGQQ 512
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
KL L+A E+ KE E + + KR ++ IT ++ +E+ + + L + Q
Sbjct: 513 KLQLEA--RKEELIKEKEDLMRDRENLKRDHQNQRTITQQMNREYEGLRVQLNNLRST-Q 569
Query: 824 DNISQA 829
+QA
Sbjct: 570 KGENQA 575
Score = 65 (27.9 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 38/172 (22%), Positives = 76/172 (44%)
Query: 740 EKHMASIE---FDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLS--DAKRQA 794
EK +A E FD IR+++ ++ + K S+ ED KK+++ + + K++
Sbjct: 394 EKQVAEAEERSFDNDIRKVDETIETYNK-----SI--EDIKKDIKEFTDQIKIQEQKKET 446
Query: 795 ESIAFITPELEKEFLEMPTTIE-------------ELEAAIQDNISQANSIFFLNQNILQ 841
+ +T +E+E ++ T IE L+ + I + N+ NQ+ L
Sbjct: 447 NNREILT--IEREEAKIQTQIEANNKKRQQRKQRRHLQLQSINEIKERNAQLANNQSKLD 504
Query: 842 EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETF 893
E + + +Q L ++E KE + + + + LK R + Q+N +
Sbjct: 505 EIKKKGQQKLQLEARKEELIKEKEDLMRDRENLKRDH-QNQRTITQQMNREY 555
Score = 45 (20.9 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 359 QTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED 418
+T+ Y + IE + I E +Q ++Q+ +KE N+ LT+ + +++ +
Sbjct: 414 ETIETY---NKSIEDIKKDIKEF---TDQIKIQEQKKETN-NREILTIEREEAKIQTQIE 466
Query: 419 KNNK 422
NNK
Sbjct: 467 ANNK 470
Score = 44 (20.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 17/82 (20%), Positives = 41/82 (50%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNS 430
IE+ ++I + ++AN K+ Q+ ++ + L ++ + +R + + +KL ++
Sbjct: 454 IEREEAKI-QTQIEANNKKRQQRKQRRHLQLQ--SINEIKERNAQLANNQSKL-DEIKKK 509
Query: 431 GAENIFEAYCWLQQHRHELNKE 452
G + + L+ + EL KE
Sbjct: 510 GQQKL-----QLEARKEELIKE 526
Score = 37 (18.1 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 8/44 (18%), Positives = 25/44 (56%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 419
S++ E+ + QK ++ KE+++ + + +R + +D +++
Sbjct: 501 SKLDEIKKKGQQKLQLEARKEELIKEKEDLMRDRENLKRDHQNQ 544
>ASPGD|ASPL0000035336 [details] [associations]
symbol:AN10415 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0030915 "Smc5-Smc6
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] InterPro:IPR027132
InterPro:IPR003395 Pfam:PF02463 EMBL:BN001306 PANTHER:PTHR19306:SF2
EnsemblFungi:CADANIAT00009574 HOGENOM:HOG000193352 OMA:GETSANI
Uniprot:C8VHA6
Length = 1146
Score = 204 (76.9 bits), Expect = 3.7e-23, Sum P(3) = 3.7e-23
Identities = 69/256 (26%), Positives = 116/256 (45%)
Query: 10 KVSRGEDD-YMPGN--IIE-IELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIAL 65
K S G D+ P I+E +E +NFM DH + G +N ++G NGSGKS+++ AI L
Sbjct: 89 KYSFGSDEPNAPSEHGILERVECYNFMCHDHFQVELGPLINFIVGKNGSGKSAVLTAITL 148
Query: 66 ALGGDTQLLGRATSIGAYVKRGEESGYIKISLRG--------DTKEEHLTIMRKIDTRNK 117
LGG R S+ +++K G+ES I + ++ D + + + R
Sbjct: 149 CLGGKASTTNRGQSLKSFIKEGKESATIIVRIKNQGDGAYLPDDLGKSIIVERHFSKSGA 208
Query: 118 SEWFF---NGKV--VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEF-AKLSPVKLLEETE 171
S + NG++ + E+ I F +Q N L QD +F + SP + +
Sbjct: 209 SSFKIKADNGRIFSTKRTELDAIIDHFTLQFENPMNVLSQDMARQFLSSSSPAEKYKFFV 268
Query: 172 KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELL 231
K V QL Q L+E+ IE +K ++ LK E+ +E Q+ L
Sbjct: 269 KGVQLEQLD-QDYRLIEEYGD--QIEEKIKSKQQDVSVLKNRRDAAERKLEMSDQQENLR 325
Query: 232 EKVESMKKKLPWLKYD 247
E+ ++++ W + +
Sbjct: 326 ERQRKLRRQAAWAQVE 341
Score = 135 (52.6 bits), Expect = 3.7e-23, Sum P(3) = 3.7e-23
Identities = 69/352 (19%), Positives = 142/352 (40%)
Query: 654 EAAKLQKEREEIINIVQIEKRKRREMEN-HINLRKRKLESIEKEDDINTALAKLVDQAAD 712
E+ + EE+ +Q E + ++E +LR+ + E + E ++ A + +
Sbjct: 775 ESQRKDDRIEELEESLQKEGSQDGDLEILQASLREAQEEKLTHEGSLDDAANAMTEMMQ- 833
Query: 713 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLH 772
N+++ K + K+ + + + AE I + R E N +L +
Sbjct: 834 -NLKRIKKELATKDAEIARLKDELRVAESEQYLIADKRRKRIGEKNAAV--ELVDDTNRR 890
Query: 773 YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE-ELEAAIQDNISQANS 831
K++ + +D + I+ +E + E P T++ +LE +D ++ +
Sbjct: 891 RARMKQKRDSAD---ADVLEYISKASVISERVEIDEGETPATLDRKLERVTRDMVTYSRE 947
Query: 832 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 891
+ + I E + + + + E L+ A ++ KE+W ++ ++
Sbjct: 948 LGGSREEIRAEADTAIKAHQQALKQVEEFGMLLEVLKASLNHRKERWRAFRSHISSRAKA 1007
Query: 892 TFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTIL 951
F+ E + G + D D + ++ + E A SGGE+S S +
Sbjct: 1008 QFTYLLSERSFRGRLLADHENKTLD---LQVEPDITKDSS-EGRGARTLSGGEKSFSQVC 1063
Query: 952 YLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTP 1003
L++L + P R +DE + MD IN + L+ AA + Q L+TP
Sbjct: 1064 LLLALWEAMGSPIRCLDEFDVYMDHINRKMAIDMLMYAARRSVGRQFILITP 1115
Score = 77 (32.2 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 67/320 (20%), Positives = 136/320 (42%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVD 708
R+ D ++++ +RE + N+ Q+ + E+ + + R ++ E+ + L +
Sbjct: 718 RMKSDRDSQIRVQREAVANLRQVLNAREEELRSAQSHLTRCRQAFERNERKKNFLV-IES 776
Query: 709 QAADLNIQQFKYAIEIKNLL---VEIV--SCKWSYAEK--HMASIEFDAK-IRELEFNLK 760
Q D I++ + +++ + +EI+ S + + EK H S++ A + E+ NLK
Sbjct: 777 QRKDDRIEELEESLQKEGSQDGDLEILQASLREAQEEKLTHEGSLDDAANAMTEMMQNLK 836
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEKEFLEMPTTIEELE 819
+ +K E K+ E R L D R AES + I + K E +E ++
Sbjct: 837 RIKK---------ELATKDAEIAR--LKDELRVAESEQYLIADKRRKRIGEKNAAVELVD 885
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 879
+ + ++L EY + I S + E D+ E A +D E+
Sbjct: 886 DTNRRRARMKQKRDSADADVL-EYISKASVI---SERVEIDEGETP---ATLDRKLER-- 936
Query: 880 PTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES---DFDKFGILIKV-KFRQSGQLEVL 935
R++V E + +E+ + ++ H+ ++FG+L++V K + + E
Sbjct: 937 -VTRDMVTYSRE-LGGSREEIRAEADTAIKAHQQALKQVEEFGMLLEVLKASLNHRKERW 994
Query: 936 SAHHQSGGERSVSTILYLVS 955
A R+ + YL+S
Sbjct: 995 RAFRSHISSRAKAQFTYLLS 1014
Score = 72 (30.4 bits), Expect = 3.7e-23, Sum P(3) = 3.7e-23
Identities = 48/223 (21%), Positives = 88/223 (39%)
Query: 364 YEPPHDKIEKLGSQILELGVQAN---QKRLQKSEKEKIL-NQNKLTLRQCSDRLKDMEDK 419
Y D++E+ +E+ Q + Q Q S+ + +Q K + + +D+E+
Sbjct: 460 YSRKLDELERAKQDAMEVRKQIDELEQNASQLSDDIRAAESQEKAAYQPVAQARRDLEEA 519
Query: 420 NNKLLHAL------RNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLE 473
N+ LLH L RNSG A Q + GP+ V + ++ LE
Sbjct: 520 NS-LLHNLNREGSGRNSGFPERMSALLKAIQQNRSFTETPVGPIGNFVTLLKPEWSSILE 578
Query: 474 DHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPILNYVSN----ESSRKEPFQ-ISEEMRA 528
G + FI D+ L++ + + P ++ + +S+ EP Q + +R
Sbjct: 579 SSFGATL-NGFIVTSKRDQSILSEIMHRVNCPTPIFIGSGGSINTSQHEPDQQFNTVLRV 637
Query: 529 LGISARL-DQVFDAPHAVKE-VLISQFGLDSSYIGSKETDQKA 569
L L + H +++ +LI SS + E + A
Sbjct: 638 LQFDNELVRRQLVINHGIEQNLLIENLEEASSVLFDGERPRNA 680
Score = 57 (25.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 15/66 (22%), Positives = 32/66 (48%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
+Q EQR I + + +++ + Q+++ RR + H RKL+ +E+ +
Sbjct: 420 LQAEQRRIREHVREANARIQQLQH--QVDEETRRLADLHGGGYSRKLDELERAKQDAMEV 477
Query: 704 AKLVDQ 709
K +D+
Sbjct: 478 RKQIDE 483
Score = 56 (24.8 bits), Expect = 4.7e-15, Sum P(3) = 4.7e-15
Identities = 34/158 (21%), Positives = 70/158 (44%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
++EQ LI D+ K E+ + +V R+R M K+K +S + + + A
Sbjct: 860 ESEQYLIADKRRKRIGEKNAAVELVDDTNRRRARM-------KQKRDSADADVLEYISKA 912
Query: 705 KLVDQAADLNIQQFKYAIE--IKNLLVEIVSCKWSYA-EKHMASIEFDAKIRELEFNLKQ 761
++ + +++ + ++ ++ + ++V+ + E D I+ + LKQ
Sbjct: 913 SVISERVEIDEGETPATLDRKLERVTRDMVTYSRELGGSREEIRAEADTAIKAHQQALKQ 972
Query: 762 HEKLA-----LQASLHYEDCKKEVEHCRKHLSD-AKRQ 793
E+ L+ASL++ K+ R H+S AK Q
Sbjct: 973 VEEFGMLLEVLKASLNHR--KERWRAFRSHISSRAKAQ 1008
Score = 51 (23.0 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 164 VKLLEETEKAVGDPQLP--VQHCALVEKSSKLKTIECTVKRNGD 205
++ LEE + D + P + C + KS + + I + RNG+
Sbjct: 661 IENLEEASSVLFDGERPRNAKRCFCINKSDRRRGILLSYSRNGE 704
Score = 42 (19.8 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 503 DVPILNYVSNESSRKEPFQISEEMRALGISARLDQV 538
D +L Y+S S E +I E + +L++V
Sbjct: 902 DADVLEYISKASVISERVEIDEGETPATLDRKLERV 937
Score = 39 (18.8 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 202 RNGDTLNQLKALNVEQEKDVERVRQRAELLEKVE 235
R + LN+ L EQ + E VR+ +++++
Sbjct: 409 RWNEALNERHELQAEQRRIREHVREANARIQQLQ 442
Score = 38 (18.4 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 7/20 (35%), Positives = 15/20 (75%)
Query: 433 ENIFEAYCWLQQHRHELNKE 452
E++ EA +QQ +H++++E
Sbjct: 429 EHVREANARIQQLQHQVDEE 448
>UNIPROTKB|I3L795 [details] [associations]
symbol:I3L795 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030915 "Smc5-Smc6 complex" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IEA] InterPro:IPR027131 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:CU915560
Ensembl:ENSSSCT00000029379 Uniprot:I3L795
Length = 176
Score = 272 (100.8 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 59/141 (41%), Positives = 84/141 (59%)
Query: 105 HLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP 163
+L I R+ID +N+S WF N K + V E NIQV NL QFLPQD+V EFAKLS
Sbjct: 19 NLVITREIDVAKNQSFWFINKKPTTQKVVEEQVAALNIQVGNLCQFLPQDKVGEFAKLSK 78
Query: 164 VKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVER 223
++LLE TEK++G P++ HC L K K +E + K + L ++ N ++DVER
Sbjct: 79 IELLEATEKSIGPPEMHRYHCELKNFREKEKQLETSCKEKTEYLEKMIQRNERYKQDVER 138
Query: 224 VRQRAELLEKVESMKKKLPWL 244
+R L+ +E ++ K PW+
Sbjct: 139 FYERKRHLDLIEMLEAKRPWV 159
>UNIPROTKB|Q9X0R4 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:243274 "Thermotoga maritima MSB8" [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
EMBL:AE000512 GenomeReviews:AE000512_GR GO:GO:0007062
SUPFAM:SSF75553 KO:K03529 TIGRFAMs:TIGR02168 EMBL:AGIJ01000001
PIR:A72287 RefSeq:NP_228987.1 PDB:1E69 PDB:1GXJ PDB:1GXK PDB:1GXL
PDBsum:1E69 PDBsum:1GXJ PDBsum:1GXK PDBsum:1GXL SMR:Q9X0R4
GeneID:898303 KEGG:tma:TM1182 PATRIC:23937304 OMA:NNEVHAL
ProtClustDB:CLSK875623 EvolutionaryTrace:Q9X0R4 Uniprot:Q9X0R4
Length = 1170
Score = 208 (78.3 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 96/396 (24%), Positives = 192/396 (48%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTA 702
++ E++++++ K+ R E+ N+++ + R +EM + + +E I +E +DI
Sbjct: 790 LEKEKKILDELNEKIFTLRAEVGNLLETKDRYEKEMRD----TGKMIERIARETEDIKLQ 845
Query: 703 LAKLVDQAADLNIQQF--KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
+ L ++ N ++F ++ EI++L E+ S + + H + E K+REL+
Sbjct: 846 MTSLEEEME--NYRKFIREHEREIEHLKKEMDSV-FEAMKLHRSGKE--EKMRELQ---- 896
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL-E 819
+ ++ K+E E R HL + L +EF +EEL E
Sbjct: 897 -------EVENRMDELKEEKERLRNHLHQIDLALQETRLKIANLLEEFSGNEEDVEELDE 949
Query: 820 AAIQDNISQA----NSIFFLNQ---NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 872
+++ Q N I +L + EYE + + E++ KQ+ D +E KR L EI
Sbjct: 950 EKLEEIYRQIKDLENKIKYLGPVDLTAIDEYEKLREEYEEI-LKQKEDLEEAKRKLEEII 1008
Query: 873 ALKEKWLPTLR-NLVAQINETFSRNFQEMAVAGEVSLD---EHESDFDK-FGILIKVKFR 927
++ +L ++ ++NE+F+R + GE L+ E +S D F I I+ R
Sbjct: 1009 EKTDREAESLLFDVYQRVNESFNRFISLLFFGGEGRLNIVSEAKSILDAGFEISIRKPGR 1068
Query: 928 QSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLV 987
+ +L +LS GGE+++ + L +L ++ PF V+DE++ +D N + F++L+
Sbjct: 1069 RDQKLSLLS-----GGEKALVGLALLFALMEIKPSPFYVLDEVDSPLDDYNAER-FKRLL 1122
Query: 988 RAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNG 1023
+ S+ +T Q ++T + +E ++ + ++NG
Sbjct: 1123 KENSK-HT-QFIVITHNKIV-MEAADLLHGVTMVNG 1155
Score = 136 (52.9 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 70/284 (24%), Positives = 127/284 (44%)
Query: 645 QTEQRLIE--DEAAKLQKEREEIIN---IVQIE----KRKRREMENHINLRKRKLESIEK 695
+TE+++ E DE A L+ E+E + N +VQ E RK + ++ R + +++
Sbjct: 680 ETERQIAEKRDELASLKTEQENLKNQEALVQRELFELSRKSSSTKTVLSEILRSINQLQE 739
Query: 696 E-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR- 753
E +++ L + + LN ++ K EI L + + S E + +E + KI
Sbjct: 740 EVENLEKLLVEYRAKEEGLNARREKIFEEIDELKQNRENLQRSLTE-YSEELEKEKKILD 798
Query: 754 ELE---FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 810
EL F L+ L+ YE KE+ K + R+ E I LE+E
Sbjct: 799 ELNEKIFTLRAEVGNLLETKDRYE---KEMRDTGKMIERIARETEDIKLQMTSLEEEMEN 855
Query: 811 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEA---DKKELKRF 867
I E E I+ + +S+F + E + R+++++ + + +K+ L+
Sbjct: 856 YRKFIREHEREIEHLKKEMDSVFEAMKLHRSGKEEKMRELQEVENRMDELKEEKERLRNH 915
Query: 868 LAEID-ALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDE 910
L +ID AL+E L +A + E FS N +++ E L+E
Sbjct: 916 LHQIDLALQETRLK-----IANLLEEFSGNEEDVEELDEEKLEE 954
Score = 130 (50.8 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 58/279 (20%), Positives = 118/279 (42%)
Query: 44 RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEES----GYIKISLRG 99
R+ ++GPNGSGKS+++ AI G ++ RA+ + G E+ G + L
Sbjct: 25 RVTAIVGPNGSGKSNIIDAIKWVFGEQSKKELRASEKFDMIFAGSENLPPAGSAYVELVF 84
Query: 100 DTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFA 159
+ E +T+ R++ ++ ++ NG V ++ + + V+ + Q ++
Sbjct: 85 EENGEEITVARELKRTGENTYYLNGSPVRLKDIRDRFAGTGLGVD-FYSIVGQGQIDRIV 143
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL----NQLKALNV 215
SP +L E+A G + + E L+ + + R D L Q+K+L +
Sbjct: 144 NASPEELRLLLEEAAG---VSIYREKKKETELNLERTKANLDRVKDVLFERERQMKSLYL 200
Query: 216 EQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLH 275
+ ++ ER ++ LE+++ + LK + KK E+ L
Sbjct: 201 KAKR-AERFKEYTAQLEELQKIYYGNV-LKRERKKLEFYQEEEKKTNEKIKNIQ--KELV 256
Query: 276 EFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLE 314
E + E +D + ++ + L+ + KR+ D +E
Sbjct: 257 ELETKWSTLRSEFGEMDQEIERYTKLLEDYKKRQNDLVE 295
Score = 128 (50.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 59/248 (23%), Positives = 121/248 (48%)
Query: 659 QKEREEIINIVQIEKRKRREMENHINLRKR---KLESIEKE-DDINTALAKLVDQAADLN 714
Q E + I + KR+R+++E + K+ K+++I+KE ++ T + L + +++
Sbjct: 214 QLEELQKIYYGNVLKRERKKLEFYQEEEKKTNEKIKNIQKELVELETKWSTLRSEFGEMD 273
Query: 715 --IQQFKYAIE-IKNLLVEIVSCKWSYAEKHMAS----IEFDAKIRELEFNLKQHEKLAL 767
I+++ +E K ++V K Y+ K S +E ++ ELE ++++K
Sbjct: 274 QEIERYTKLLEDYKKRQNDLVEMKGFYSSKLADSENKYVELSTRLDELEKRREEYKKRLE 333
Query: 768 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 827
+ ++ + E K L +++ E++ + EKEFL + I +LE I +
Sbjct: 334 EMEYIFKGVMGDYERKAKELEKFEKEKENLLSRFNDKEKEFLRVRDEISKLEKQI---LK 390
Query: 828 QANSIFFLNQNILQEYEHRQRQIED--LSTKQEA-DKK----ELKRFLAEIDALKEKWLP 880
N + + + L++ E R++ E+ L+ ++E DKK E+ R + E+D +EK L
Sbjct: 391 LENELLRIGET-LEDLEKRRKITENQILTRRRELEDKKNEFKEISRRVEELDE-EEKKLT 448
Query: 881 TLRNLVAQ 888
N V +
Sbjct: 449 EELNAVRE 456
Score = 94 (38.1 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 60/260 (23%), Positives = 115/260 (44%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKL-ESIEKEDDINTALAK 705
EQ + E E ++ ++R+E+ ++ K ++ ++N L +R+L E K T L++
Sbjct: 675 EQEMEETER-QIAEKRDELASL----KTEQENLKNQEALVQRELFELSRKSSSTKTVLSE 729
Query: 706 LVDQAADLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 764
++ +I Q + +E ++ LLVE K I F+ +I EL+ N + ++
Sbjct: 730 ILR-----SINQLQEEVENLEKLLVEY-RAKEEGLNARREKI-FE-EIDELKQNRENLQR 781
Query: 765 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 824
+ S E KK ++ + + + + ++ EKE + IE + +D
Sbjct: 782 SLTEYSEELEKEKKILDELNEKIFTLRAEVGNLLETKDRYEKEMRDTGKMIERIARETED 841
Query: 825 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEA----------DKKELKRFLAEI--- 871
Q S+ +N + +R+IE L + ++ K+E R L E+
Sbjct: 842 IKLQMTSLEEEMENYRKFIREHEREIEHLKKEMDSVFEAMKLHRSGKEEKMRELQEVENR 901
Query: 872 -DALKEKWLPTLRNLVAQIN 890
D LKE+ LRN + QI+
Sbjct: 902 MDELKEE-KERLRNHLHQID 920
Score = 84 (34.6 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 48/232 (20%), Positives = 103/232 (44%)
Query: 676 RREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIE---IKNLLVEI 731
R E +++ R+ KL+ +E+E ++ +A+ D+ A L +Q + ++ L E+
Sbjct: 657 REERSSNVFERRIKLKHLEQEMEETERQIAEKRDELASLKTEQENLKNQEALVQRELFEL 716
Query: 732 VSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAK 791
S K S + K + S E I +L+ ++ EKL ++ E E + + + K
Sbjct: 717 -SRK-SSSTKTVLS-EILRSINQLQEEVENLEKLLVEYRAKEEGLNARREKIFEEIDELK 773
Query: 792 RQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ---NILQEYEHRQR 848
+ E+ L++ E +E+ E I D +++ IF L N+L+ + ++
Sbjct: 774 QNREN-------LQRSLTEYSEELEK-EKKILDELNE--KIFTLRAEVGNLLETKDRYEK 823
Query: 849 QIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 900
++ D E +E + ++ +L+E+ + R + + +EM
Sbjct: 824 EMRDTGKMIERIARETEDIKLQMTSLEEE-MENYRKFIREHEREIEHLKKEM 874
Score = 81 (33.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 57/256 (22%), Positives = 114/256 (44%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREMEN-HINLRKRKLESIEKE-DDINTALAKL 706
+L+ED +K + +++ + K + EN ++ L R L+ +EK ++ L ++
Sbjct: 281 KLLED----YKKRQNDLVEMKGFYSSKLADSENKYVELSTR-LDELEKRREEYKKRLEEM 335
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 766
+ + A E++ E + + +K + +I +LE + + E
Sbjct: 336 EYIFKGVMGDYERKAKELEKFEKEKENLLSRFNDKEKEFLRVRDEISKLEKQILKLENEL 395
Query: 767 LQASLHYEDCKK-------EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
L+ ED +K ++ R+ L D K + + I+ EL++E E T EEL
Sbjct: 396 LRIGETLEDLEKRRKITENQILTRRRELEDKKNEFKEISRRVEELDEE--EKKLT-EELN 452
Query: 820 AAIQDNISQANS-IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL---K 875
A +++ + + I +N I E R R+I+ E D +E + F + A+ K
Sbjct: 453 A-VRERLEEIEGEIRRVNLEI-DAKEKRLREIQFEKEMIERDMREYRGFSRAVRAVFEEK 510
Query: 876 EKWLPTLRNLVAQINE 891
E++ P L ++V+ + E
Sbjct: 511 ERF-PGLVDVVSNLIE 525
Score = 69 (29.3 bits), Expect = 1.2e-13, Sum P(4) = 1.2e-13
Identities = 49/227 (21%), Positives = 92/227 (40%)
Query: 95 ISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLE-ITKRFNIQVNN-LTQFLP- 151
+S D ++E L + +I K +++ GE LE + KR I N LT+
Sbjct: 364 LSRFNDKEKEFLRVRDEISKLEKQILKLENELLRIGETLEDLEKRRKITENQILTRRREL 423
Query: 152 QDRVCEFAKLSP-VKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
+D+ EF ++S V+ L+E EK + + V+ L E +++ + + L ++
Sbjct: 424 EDKKNEFKEISRRVEELDEEEKKLTEELNAVRE-RLEEIEGEIRRVNLEIDAKEKRLREI 482
Query: 211 KALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXX 270
+ E+D+ R + + V K++ P L + +
Sbjct: 483 QFEKEMIERDMREYRGFSRAVRAVFEEKERFPGLVDVVSNLIEVDEKYSLAVSVLLGGTA 542
Query: 271 XNTLH---EFSKPI-EGKKQEKA---------ILDGDCKKLSSLINE 304
N + + +K I E KQ +A ++DG ++S L NE
Sbjct: 543 QNIVVRNVDTAKAIVEFLKQNEAGRVTILPLDLIDGSFNRISGLENE 589
Score = 63 (27.2 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEK-EKILNQNKLTLRQCSDRLKDMEDKNNK 422
D+I KL QIL+L + L+ E E + + K+T Q R +++EDK N+
Sbjct: 379 DEISKLEKQILKL----ENELLRIGETLEDLEKRRKITENQILTRRRELEDKKNE 429
Score = 59 (25.8 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 34/154 (22%), Positives = 70/154 (45%)
Query: 89 ESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNL-T 147
E+ Y+++S R D E+ +K + E+ F G + + ++F + NL +
Sbjct: 308 ENKYVELSTRLDELEKRREEYKK--RLEEMEYIFKGVMGDYERKAKELEKFEKEKENLLS 365
Query: 148 QFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL 207
+F D+ EF ++ + + EK + L +++ L+ L+ +E KR T
Sbjct: 366 RF--NDKEKEFLRVRDE--ISKLEKQI----LKLEN-ELLRIGETLEDLE---KRRKITE 413
Query: 208 NQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
NQ+ E E ++ + +E+++ +KKL
Sbjct: 414 NQILTRRRELEDKKNEFKEISRRVEELDEEEKKL 447
Score = 58 (25.5 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 40/177 (22%), Positives = 82/177 (46%)
Query: 83 YVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWF-FNGKVVPKGEVLEITKRFNI 141
Y KR EE YI + GD E + K + ++ FN K + E L +
Sbjct: 328 YKKRLEEMEYIFKGVMGDY-ERKAKELEKFEKEKENLLSRFNDK---EKEFLRVRD---- 379
Query: 142 QVNNLT-QFLPQDRVCEFAKLSPVKLLEETEKA--VGDPQLPVQHCALVEKSSKLKTIEC 198
+++ L Q L + E ++ + LE+ EK + + Q+ + L +K ++ K I
Sbjct: 380 EISKLEKQILKLEN--ELLRIG--ETLEDLEKRRKITENQILTRRRELEDKKNEFKEISR 435
Query: 199 TVKRNGDTLNQL-KALNVEQEK--DVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
V+ + +L + LN +E+ ++E +R L ++++ +K+L ++++ + E
Sbjct: 436 RVEELDEEEKKLTEELNAVRERLEEIEGEIRRVNL--EIDAKEKRLREIQFEKEMIE 490
Score = 52 (23.4 bits), Expect = 5.5e-12, Sum P(3) = 5.5e-12
Identities = 26/81 (32%), Positives = 36/81 (44%)
Query: 378 ILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFE 437
+LE + R +K E E L + K L + D L + E + K L+ L+ AE E
Sbjct: 153 LLEEAAGVSIYREKKKETELNLERTKANLDRVKDVLFERE-RQMKSLY-LKAKRAERFKE 210
Query: 438 AYCWLQQHRHELNKEAYGPVL 458
L+ EL K YG VL
Sbjct: 211 YTAQLE----ELQKIYYGNVL 227
Score = 52 (23.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 41/211 (19%), Positives = 86/211 (40%)
Query: 369 DKIEKL--GSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
+ +EKL + E G+ A ++++ + E L QN+ L++ + +K K+L
Sbjct: 742 ENLEKLLVEYRAKEEGLNARREKIFEEIDE--LKQNRENLQRSLTEYSEELEKEKKILDE 799
Query: 427 LRNSGAENIFEAYCWLQ-QHRHELNKEAYGPVLLEVNVSN---RAHANYLEDHVGHYIWK 482
L E L+ + R+E G ++ + + LE+ + +Y +
Sbjct: 800 LNEKIFTLRAEVGNLLETKDRYEKEMRDTGKMIERIARETEDIKLQMTSLEEEMENY--R 857
Query: 483 SFITQDAGDRDFLAKNLKP-FDVPILNYVSNESSRKEPFQISEEMRALGISA-RL-DQVF 539
FI + + + L K + F+ L+ E +E ++ M L RL + +
Sbjct: 858 KFIREHEREIEHLKKEMDSVFEAMKLHRSGKEEKMRELQEVENRMDELKEEKERLRNHLH 917
Query: 540 DAPHAVKEVLISQFGLDSSYIGSKETDQKAD 570
A++E + L + G++E ++ D
Sbjct: 918 QIDLALQETRLKIANLLEEFSGNEEDVEELD 948
Score = 50 (22.7 bits), Expect = 8.7e-12, Sum P(3) = 8.7e-12
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 419
+ + GS +EL + N + + + + K +N L RLKD+ D+
Sbjct: 70 ENLPPAGSAYVELVFEENGEEITVARELKRTGENTYYLNGSPVRLKDIRDR 120
Score = 48 (22.0 bits), Expect = 2.0e-13, Sum P(4) = 2.0e-13
Identities = 18/68 (26%), Positives = 35/68 (51%)
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
+E+ +KL +E KR D L ++K + D E + EL +++ ++K+ K
Sbjct: 276 IERYTKL--LEDYKKRQND-LVEMKGFYSSKLADSEN--KYVELSTRLDELEKRREEYKK 330
Query: 247 DMKKAEYI 254
+++ EYI
Sbjct: 331 RLEEMEYI 338
Score = 45 (20.9 bits), Expect = 2.9e-20, Sum P(3) = 2.9e-20
Identities = 18/75 (24%), Positives = 33/75 (44%)
Query: 377 QILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIF 436
++ EL +++ + SE + +NQ + + L + K L N+ E IF
Sbjct: 712 ELFELSRKSSSTKTVLSEILRSINQLQEEVENLEKLLVEYRAKEEGL-----NARREKIF 766
Query: 437 EAYCWLQQHRHELNK 451
E L+Q+R L +
Sbjct: 767 EEIDELKQNRENLQR 781
Score = 44 (20.5 bits), Expect = 9.0e-20, Sum P(4) = 9.0e-20
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 370 KIEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLH 425
K++ L ++ E Q +KR + K+E+E + NQ L R+ + + L
Sbjct: 670 KLKHLEQEMEETERQIAEKRDELASLKTEQENLKNQEALVQRELFELSRKSSSTKTVLSE 729
Query: 426 ALRN 429
LR+
Sbjct: 730 ILRS 733
Score = 42 (19.8 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 479 YIWKSFITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPF-QISEEMRAL 529
YI+K + GD + AK L+ F+ N +S + +++ F ++ +E+ L
Sbjct: 337 YIFKGVM----GDYERKAKELEKFEKEKENLLSRFNDKEKEFLRVRDEISKL 384
Score = 42 (19.8 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 369 DKIEKLGSQI--LELGVQANQKRLQKSEKEK 397
+++E++ +I + L + A +KRL++ + EK
Sbjct: 456 ERLEEIEGEIRRVNLEIDAKEKRLREIQFEK 486
Score = 41 (19.5 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 8/41 (19%), Positives = 20/41 (48%)
Query: 507 LNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKE 547
+N + E E + + G++AR +++F+ +K+
Sbjct: 734 INQLQEEVENLEKLLVEYRAKEEGLNARREKIFEEIDELKQ 774
Score = 41 (19.5 bits), Expect = 7.1e-11, Sum P(3) = 7.1e-11
Identities = 21/96 (21%), Positives = 43/96 (44%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
++KI+ + +++EL + + R + E ++ + + L R D+ + K ++
Sbjct: 245 NEKIKNIQKELVELETKWSTLRSEFGEMDQEIERYTKLLEDYKKRQNDLVEM--KGFYSS 302
Query: 428 RNSGAENIFEAYCWLQQHRHELNK--EAYGPVLLEV 461
+ + +EN Y L EL K E Y L E+
Sbjct: 303 KLADSEN---KYVELSTRLDELEKRREEYKKRLEEM 335
Score = 37 (18.1 bits), Expect = 4.6e-19, Sum P(4) = 4.6e-19
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 388 KRLQKSEKEK--IL---NQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 431
K L+K EKEK +L N + + D + +E + KL + L G
Sbjct: 351 KELEKFEKEKENLLSRFNDKEKEFLRVRDEISKLEKQILKLENELLRIG 399
>FB|FBgn0039164 [details] [associations]
symbol:CG5524 species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
[GO:0030915 "Smc5-Smc6 complex" evidence=IEA] InterPro:IPR027132
InterPro:IPR003395 Pfam:PF02463 EMBL:AE014297 HSSP:P58301
eggNOG:COG1196 PANTHER:PTHR19306:SF2 GeneTree:ENSGT00550000074816
OMA:CANEANY EMBL:BT023747 RefSeq:NP_651228.1 UniGene:Dm.16547
SMR:Q9VCB8 IntAct:Q9VCB8 EnsemblMetazoa:FBtr0084573 GeneID:42876
KEGG:dme:Dmel_CG5524 UCSC:CG5524-RA FlyBase:FBgn0039164
InParanoid:Q9VCB8 OrthoDB:EOG42Z354 GenomeRNAi:42876 NextBio:831043
Uniprot:Q9VCB8
Length = 1122
Score = 198 (74.8 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 74/242 (30%), Positives = 114/242 (47%)
Query: 21 GNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
G +I + L NFM +L + G +N ++G NGSGKS+++ A+AL L + RA+SI
Sbjct: 97 GKVISMRLTNFMCHSNLFIEFGPNINFLVGNNGSGKSAVITALALGLTSSARATNRASSI 156
Query: 81 GAYVKRGEESGYIKISL--------RGDTKEEHLTIMRKIDTRNKSEWF----FNGKVVP 128
+K GE S I I+L + D HLT++R+I R+ S + GK V
Sbjct: 157 QKLIKNGEVSATISITLSNSGLRPFKADIFGPHLTVVRQI--RHSSSTYDLQDARGKSVS 214
Query: 129 KGEVLEITKR---FNIQVNNLTQFLPQDRVCEFAK-LSPVKLLEETEKAVGDPQLPVQHC 184
K +V +I + F I V N L Q+ EF K L P + KA QL V
Sbjct: 215 K-KVSDIRRMLLCFGINVENPIFVLNQEAAREFLKELEPASNYKLLMKAT---QLDVCTS 270
Query: 185 ALVEKSSKLK--TIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLP 242
+L E + + T E + +K + E+EK + + + + E ++ K KL
Sbjct: 271 SLTECHALRRHFTQELEQLEKKKEM-MIKHIAAEEEK-LSILEDKEMVKENLQQCKTKLA 328
Query: 243 WL 244
W+
Sbjct: 329 WM 330
Score = 149 (57.5 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 88/377 (23%), Positives = 165/377 (43%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 706
+ + + + K+ ++ +I Q + R ++ M+ + L+ + + + D + + LA
Sbjct: 745 QHKKVLENTQKVISQKSTMIG--QHQSRNQKAMQKIMELQNFDYQELPEYDRLKSHLADS 802
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 766
++ +++ ++ ++ + + AE+ A + K+ L+ + E
Sbjct: 803 GEKIEKCRLEREMLQEKLLSIQHRQTELESTEAEERRALEGINKKLTALDTEAGEVESKM 862
Query: 767 LQASLHYED----CKKEVEHCRKHLSDAKRQAESIAFITPELEK--EFLEMPTTIEELEA 820
LHYE+ +K ++ RK L + + + E EK EF+ T E++
Sbjct: 863 RSLDLHYEENTRRFQKTLQLERKMLGEKETVLSELEKARTEAEKLGEFIATTQTEEKIRE 922
Query: 821 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELK-RFLAEIDALKEKWL 879
AI S+ + LN N E +R + +L D+ EL+ R LA +D++ +K
Sbjct: 923 AISRYKSKIKQVEELNYNP----EELERGLAELR-----DELELQSRHLAVVDSVVKK-- 971
Query: 880 PTLRNLVAQINETFSRN---------FQ-EMAVA-GEVSLDEHESDFDKFGILIKVKFRQ 928
LR Q + F R+ FQ E A+A + + SD +K I V F
Sbjct: 972 --LRMAYHQRAQLFQRSRHHYFTMVQFQFEQALAMRQFKVSFETSDKEKTW-KINV-FPP 1027
Query: 929 SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVR 988
SG E + SGGERS +T+ L L ++ PF +DE + D +N + + + L+
Sbjct: 1028 SGN-ETSNTRSLSGGERSFTTVSLLKGLWSTSDHPFYFLDEYDVFTDEVNRKFITEILIG 1086
Query: 989 AASQPNTPQ-CFLLTPK 1004
+ + Q CFL TP+
Sbjct: 1087 EGLEWLSRQYCFL-TPQ 1102
Score = 102 (41.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 55/257 (21%), Positives = 118/257 (45%)
Query: 670 QIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNL-- 727
Q+EK+K M HI + KL +E ++ + L + + A + + Y E+ NL
Sbjct: 288 QLEKKKEM-MIKHIAAEEEKLSILEDKEMVKENLQQCKTKLAWMAVTS--YQNELNNLEH 344
Query: 728 ---LVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEH 782
L+E S + + ++K + K++E F +++ LA Q ++D + ++
Sbjct: 345 SIKLIENKKASLEQTTSKKESTQATMNQKLKE--FEASKNQILATQK---FQD--ERLKT 397
Query: 783 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 842
+K + D +A + E+ E + +E E I + + N + + +
Sbjct: 398 AKKAVQDLLLEASQVKAKIGNAERRMREDQRSYDECEKLIGNYHADFNRVNEQREENANK 457
Query: 843 YEHRQRQI---EDLSTKQEADKKELKRFLAEI----DALKEKWLP---TLRNLVAQINET 892
E ++Q+ E++ + A+++E+KR + + DA+K + + +N+ +I E
Sbjct: 458 IEMLKKQVVKSEEIIAQLRAEQQEIKRDITSVQERLDAVKNGRIQLHKSKQNISWEI-EA 516
Query: 893 FSRN-FQEMAVAGEVSL 908
SRN +++V GE ++
Sbjct: 517 LSRNKSNKLSVYGEQTI 533
Score = 69 (29.3 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 37/178 (20%), Positives = 77/178 (43%)
Query: 749 DAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAK--------RQAESIAFI 800
D +IR+L+ ++ + Y KK +E+ +K +S R +++ I
Sbjct: 719 DDRIRQLQMEQSDLQEKEPSLEIDYMQHKKVLENTQKVISQKSTMIGQHQSRNQKAMQKI 778
Query: 801 TPELEK-EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE----YEHRQRQIEDLST 855
EL+ ++ E+P + L++ + D+ + L + +LQE +HRQ ++E
Sbjct: 779 M-ELQNFDYQELPE-YDRLKSHLADSGEKIEKCR-LEREMLQEKLLSIQHRQTELESTEA 835
Query: 856 KQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES 913
++ + + + L +D + +R+L E +R FQ+ L E E+
Sbjct: 836 EERRALEGINKKLTALDTEAGEVESKMRSLDLHYEEN-TRRFQKTLQLERKMLGEKET 892
Score = 63 (27.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 35/182 (19%), Positives = 78/182 (42%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREM-----ENHINLRKRKLESIE-KEDDINTALAK 705
E+E + +++E + +Q K K M +N +N + ++ IE K+ + +K
Sbjct: 303 EEEKLSILEDKEMVKENLQQCKTKLAWMAVTSYQNELNNLEHSIKLIENKKASLEQTTSK 362
Query: 706 LVDQAADLNIQQFKYAIEIKNLLV---EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
A +N Q+ K KN ++ + + A+K + + +A +++ +
Sbjct: 363 KESTQATMN-QKLKEFEASKNQILATQKFQDERLKTAKKAVQDLLLEAS--QVKAKIGNA 419
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
E+ + Y++C+K + + + Q E A L+K+ ++ I +L A
Sbjct: 420 ERRMREDQRSYDECEKLIGNYHADFNRVNEQREENANKIEMLKKQVVKSEEIIAQLRAEQ 479
Query: 823 QD 824
Q+
Sbjct: 480 QE 481
Score = 59 (25.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 16/82 (19%), Positives = 42/82 (51%)
Query: 168 EETEKAVGDPQLPVQHC--ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVR 225
+E EK +G+ E ++K++ ++ V ++ + + QL+A E ++D+ V+
Sbjct: 431 DECEKLIGNYHADFNRVNEQREENANKIEMLKKQVVKSEEIIAQLRAEQQEIKRDITSVQ 490
Query: 226 QRAELLE----KVESMKKKLPW 243
+R + ++ ++ K+ + W
Sbjct: 491 ERLDAVKNGRIQLHKSKQNISW 512
Score = 45 (20.9 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 16/63 (25%), Positives = 35/63 (55%)
Query: 657 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQ 716
++ ++REE N +IE K++ +++ + + + E E + DI T++ + +D + IQ
Sbjct: 446 RVNEQREENAN--KIEMLKKQVVKSEEIIAQLRAEQQEIKRDI-TSVQERLDAVKNGRIQ 502
Query: 717 QFK 719
K
Sbjct: 503 LHK 505
Score = 42 (19.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 16/80 (20%), Positives = 35/80 (43%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA-- 426
D+I +L + +L + + + +K+L + + Q S + + +N K +
Sbjct: 720 DRIRQLQMEQSDLQEKEPSLEIDYMQHKKVLENTQKVISQKSTMIGQHQSRNQKAMQKIM 779
Query: 427 -LRNSGAENIFEAYCWLQQH 445
L+N + + E Y L+ H
Sbjct: 780 ELQNFDYQELPE-YDRLKSH 798
Score = 40 (19.1 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 391 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
+K+ E+ ++ + T + +LK+ E N++L
Sbjct: 352 KKASLEQTTSKKESTQATMNQKLKEFEASKNQIL 385
>TAIR|locus:2160289 [details] [associations]
symbol:SMC6A "structural maintenance of chromosomes 6A"
species:3702 "Arabidopsis thaliana" [GO:0000155 "phosphorelay
sensor kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0005694 "chromosome" evidence=IEA] [GO:0007059 "chromosome
segregation" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0007062 "sister chromatid cohesion" evidence=IMP] [GO:0010165
"response to X-ray" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR003661 InterPro:IPR027132 SMART:SM00388
InterPro:IPR003395 Pfam:PF02463 EMBL:CP002688 GO:GO:0016020
HSSP:P58301 GO:GO:0023014 GO:GO:0000724 GO:GO:0000155 GO:GO:0000160
GO:GO:0010165 GO:GO:0007062 EMBL:AB010070 PANTHER:PTHR19306:SF2
HOGENOM:HOG000030109 ProtClustDB:CLSN2686921 IPI:IPI00521865
RefSeq:NP_196383.1 UniGene:At.32690 ProteinModelPortal:Q9FLR5
SMR:Q9FLR5 PRIDE:Q9FLR5 EnsemblPlants:AT5G07660.1 GeneID:830659
KEGG:ath:AT5G07660 TAIR:At5g07660 InParanoid:Q9FLR5 OMA:INEMTIR
PhylomeDB:Q9FLR5 ArrayExpress:Q9FLR5 Genevestigator:Q9FLR5
Uniprot:Q9FLR5
Length = 1058
Score = 166 (63.5 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 94/384 (24%), Positives = 173/384 (45%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIE-KRKRREMENHINLRKRKLES-IEKEDDINT 701
++ ++ +E + + + E +++ N V E K N ++L K + IE+++ +
Sbjct: 679 LKKQRTQLEKDLTRKELEMQDLKNSVASETKASPTSSVNELHLEIMKFQKEIEEKESL-- 736
Query: 702 ALAKLVD--QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNL 759
L KL D + A+L + K + E NL E + EK E + K +E E +
Sbjct: 737 -LEKLQDSLKEAELKANELKASYE--NLY-ESAKGEIEALEK----AEDELKEKEDELHS 788
Query: 760 KQHEKLALQASLHYEDCKKE--------VEHCRKHLSDAKRQAES--IAFITPELEKEFL 809
+ EK HYED K+ E K L + KRQ + + I PE E + L
Sbjct: 789 AETEKN------HYEDIMKDKVLPEIKQAETIYKEL-EMKRQESNKKASIICPESEIKAL 841
Query: 810 ---EMPTTIEELEAAIQD---NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 863
+ PT ++ L A I + + N + + + L+ H +++ + + K++ K
Sbjct: 842 GPWDGPTPLQ-LSAQINKINHRLKRENENYSESIDDLR-IMHGEKE-QKIGKKRKTYKSC 898
Query: 864 LKRFLAEIDALKEKWLPTLRN---LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGI 920
++ DA+ +W RN L ++ F+ + + ++G + + +E DK +
Sbjct: 899 REKLKVCKDAVDSRWNKLQRNKDLLKRELTWQFNHHLGKKGISGNIRVS-YE---DKT-L 953
Query: 921 LIKVKFRQSG-QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINE 979
I+VK Q V SGGERS ST+ + ++LQ++T P R +DE + MD ++
Sbjct: 954 SIEVKMPQDATNSAVRDTRGLSGGERSFSTLCFTLALQNMTEAPIRAMDEFDVFMDAVSR 1013
Query: 980 RKMFQQLVRAASQPNTPQCFLLTP 1003
+ L+ A + + Q +TP
Sbjct: 1014 KISLDTLIDFALKQGS-QWMFITP 1036
Score = 163 (62.4 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 66/247 (26%), Positives = 115/247 (46%)
Query: 21 GNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
G I+ I L NFM +L + G +N + G NGSGKS+++ A+ +A G + RA ++
Sbjct: 21 GKILRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATL 80
Query: 81 GAYVKRGEESG--YIKISLRGDT--KEE----HLTIMRKIDTRNKSEWF--FNGKVVP-- 128
++K G Y+++ +G+ K E L I R+I G+ +
Sbjct: 81 KDFIKTGCSYALVYVELKNQGEDAFKPEIYGDTLIIERRISDSTSLTVLKDHQGRKISSR 140
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVE 188
K E+ E+ + +NI V N + QD+ EF K + K L Q +++
Sbjct: 141 KEELRELVEHYNIDVENPCVIMSQDKSREFLHSGNDK---DKFKFFYKATLLQQVDDILQ 197
Query: 189 K-SSKLKTIECTVKRNGDTLNQL-KALN--VEQEKDVERVRQRAELLEKVESMKKKLPWL 244
+KL + + T+ + K +N +E+ K++E V E+ ++V +KKKL W
Sbjct: 198 SIGTKLNSANALLDEMEKTIKPIEKEINELLEKIKNMEHVE---EITQQVLHLKKKLAWS 254
Query: 245 -KYDMKK 250
YD+ +
Sbjct: 255 WVYDVDR 261
Score = 90 (36.7 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 44/187 (23%), Positives = 79/187 (42%)
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
A DQ DL I+ + EI+ C+ E M ++ +R L+ Q E
Sbjct: 635 ASFDDQIKDLEIEASREQSEIQE-------CRGQKREAEMNLEGLESTMRRLKKQRTQLE 687
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
K + L +D K V K + + + +KE E + +E+L+ +++
Sbjct: 688 KDLTRKELEMQDLKNSVASETK--ASPTSSVNELHLEIMKFQKEIEEKESLLEKLQDSLK 745
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLS-TKQEADKKELKRFLAEI------DALKE 876
+ +AN + +N+ YE + +IE L + E +KE + AE D +K+
Sbjct: 746 EAELKANELKASYENL---YESAKGEIEALEKAEDELKEKEDELHSAETEKNHYEDIMKD 802
Query: 877 KWLPTLR 883
K LP ++
Sbjct: 803 KVLPEIK 809
Score = 75 (31.5 bits), Expect = 4.8e-11, Sum P(3) = 4.8e-11
Identities = 43/177 (24%), Positives = 73/177 (41%)
Query: 660 KEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFK 719
++RE +N+ +E RR + L K + D+ ++A + ++ +
Sbjct: 661 QKREAEMNLEGLESTMRRLKKQRTQLEKDLTRKELEMQDLKNSVASETKASPTSSVNELH 720
Query: 720 YAIEIKNLLVEIVSCKWSYAEKHMASI-EFDAKIRELEF---NLKQHEKLALQASLHYED 775
+EI EI K S EK S+ E + K EL+ NL + K ++A ED
Sbjct: 721 --LEIMKFQKEIEE-KESLLEKLQDSLKEAELKANELKASYENLYESAKGEIEALEKAED 777
Query: 776 CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI 832
KE E K E I + ++ E + T +ELE Q++ +A+ I
Sbjct: 778 ELKEKEDELHSAETEKNHYEDI--MKDKVLPEIKQAETIYKELEMKRQESNKKASII 832
Score = 75 (31.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 38/152 (25%), Positives = 68/152 (44%)
Query: 723 EIKNLLVEIVSCKWSYAEK--HMASI--EFDAKIRELEF---NLKQ--HEKLALQASLHY 773
+I L E+ S + S EK +A + E A RELE ++K+ EK+AL+ H+
Sbjct: 283 KIDRKLGEVESLRVSLTEKKAQVACLIDESTAMKRELECLRQSMKKAAREKIALEEEYHH 342
Query: 774 EDCKKEVEHCRKHLSDAKRQAESIAFIT--------PELEKEFLEMPTTIEELEAAIQDN 825
+ C ++ + + +RQ E I +T E+E + ++ +E+ E+ +
Sbjct: 343 K-CSN-IQKIKDRVRRLERQIEDINEMTIRSTQVEQSEIEGKLNQLTVEVEKAESLVSSL 400
Query: 826 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQ 857
+ N + +E EH + I D KQ
Sbjct: 401 KEEENMVMEKASAGGKEKEHIEEMIRDHEKKQ 432
Score = 73 (30.8 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 14/51 (27%), Positives = 32/51 (62%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESI 693
++ E+ ++ ++A+ KE+E I +++ ++K+R M HIN L+K + +
Sbjct: 400 LKEEENMVMEKASAGGKEKEHIEEMIRDHEKKQRNMNAHINDLKKHQTNKV 450
Score = 66 (28.3 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 176 DPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVE 235
D QL Q+ +V+ ++ T + + R L ++++L V E+ Q A L+++
Sbjct: 260 DRQLKEQNEKIVKFKERVPTCQNKIDRK---LGEVESLRVSL---TEKKAQVACLIDEST 313
Query: 236 SMKKKLPWLKYDMKKA 251
+MK++L L+ MKKA
Sbjct: 314 AMKRELECLRQSMKKA 329
Score = 60 (26.2 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 36/201 (17%), Positives = 81/201 (40%)
Query: 748 FDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE 807
FD +I++LE + + + + + +E + K+Q + E E
Sbjct: 637 FDDQIKDLEIEASREQSEIQECRGQKREAEMNLEGLESTMRRLKKQRTQLEKDLTRKELE 696
Query: 808 FLEMPTTI-EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
++ ++ E +A+ ++++ + Q ++E E +++D + E ELK
Sbjct: 697 MQDLKNSVASETKASPTSSVNELHLEIMKFQKEIEEKESLLEKLQDSLKEAELKANELK- 755
Query: 867 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKF 926
A + L E + L +E + E+ A E + +E D K +L ++K
Sbjct: 756 --ASYENLYESAKGEIEALEKAEDELKEKE-DELHSA-ETEKNHYE-DIMKDKVLPEIKQ 810
Query: 927 RQSGQLEVLSAHHQSGGERSV 947
++ E+ +S + S+
Sbjct: 811 AETIYKELEMKRQESNKKASI 831
Score = 59 (25.8 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 36/140 (25%), Positives = 68/140 (48%)
Query: 653 DEAAKLQKEREEIINIVQIEKRKRREME---NH--INLRKRK--LESIEKE-DDIN--TA 702
DE+ +++E E + ++ R++ +E +H N++K K + +E++ +DIN T
Sbjct: 310 DESTAMKRELECLRQSMKKAAREKIALEEEYHHKCSNIQKIKDRVRRLERQIEDINEMTI 369
Query: 703 LAKLVDQAA-DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDA--KIRE-LEFN 758
+ V+Q+ + + Q +E LV S K E++M + A K +E +E
Sbjct: 370 RSTQVEQSEIEGKLNQLTVEVEKAESLVS--SLK---EEENMVMEKASAGGKEKEHIEEM 424
Query: 759 LKQHEKLALQASLHYEDCKK 778
++ HEK + H D KK
Sbjct: 425 IRDHEKKQRNMNAHINDLKK 444
Score = 59 (25.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 365 EPPHDKIEKLGSQILELGVQANQ-----KRLQKSEKEKI--LNQNKLTLRQCSDRLKDME 417
E +EKL + E ++AN+ + L +S K +I L + + L++ D L E
Sbjct: 731 EEKESLLEKLQDSLKEAELKANELKASYENLYESAKGEIEALEKAEDELKEKEDELHSAE 790
Query: 418 DKNNKLLHALRNSGAENIFEA---YCWLQQHRHELNKEA 453
+ N +++ I +A Y L+ R E NK+A
Sbjct: 791 TEKNHYEDIMKDKVLPEIKQAETIYKELEMKRQESNKKA 829
Score = 58 (25.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 389 RLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHE 448
R+ EKE+ + + + T + C ++LK +D + + L+ + + + W Q H
Sbjct: 878 RIMHGEKEQKIGKKRKTYKSCREKLKVCKDAVDSRWNKLQRN-KDLLKRELTW--QFNHH 934
Query: 449 LNKE 452
L K+
Sbjct: 935 LGKK 938
Score = 55 (24.4 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 13/66 (19%), Positives = 33/66 (50%)
Query: 369 DKIEKLGSQILELG-VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
D++ +L QI ++ + ++++SE E LNQ + + + + ++++ N ++
Sbjct: 352 DRVRRLERQIEDINEMTIRSTQVEQSEIEGKLNQLTVEVEKAESLVSSLKEEENMVMEKA 411
Query: 428 RNSGAE 433
G E
Sbjct: 412 SAGGKE 417
Score = 50 (22.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 386 NQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 438
N+ L+ + +K + + + L + D LK+ E K N+L + EN++E+
Sbjct: 717 NELHLEIMKFQKEIEEKESLLEKLQDSLKEAELKANEL-----KASYENLYES 764
Score = 45 (20.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 17/83 (20%), Positives = 34/83 (40%)
Query: 163 PVKLLEETEKAVGDPQLPV--QHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKD 220
P +L + + D ++ + + E + + E ++ T+ +LK + EKD
Sbjct: 630 PTRLCASFDDQIKDLEIEASREQSEIQECRGQKREAEMNLEGLESTMRRLKKQRTQLEKD 689
Query: 221 VERVR-QRAELLEKVESMKKKLP 242
+ R + +L V S K P
Sbjct: 690 LTRKELEMQDLKNSVASETKASP 712
Score = 44 (20.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 12/84 (14%), Positives = 38/84 (45%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME---DKNNKLLHAL 427
++++ + +G + N E EK + + + + +++K+ME + ++LH
Sbjct: 189 LQQVDDILQSIGTKLNSANALLDEMEKTIKPIEKEINELLEKIKNMEHVEEITQQVLHLK 248
Query: 428 RNSGAENIFEAYCWLQQHRHELNK 451
+ +++ L++ ++ K
Sbjct: 249 KKLAWSWVYDVDRQLKEQNEKIVK 272
Score = 44 (20.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 452 EAYGPVLL-EVNVSNRAHANYLEDHVGHYI 480
E YG L+ E +S+ L+DH G I
Sbjct: 108 EIYGDTLIIERRISDSTSLTVLKDHQGRKI 137
Score = 42 (19.8 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 192 KLKTIECTVKRNGDTLNQL--KALNVEQEKDVERVRQRAELLEKVESMKKKL 241
K+K ++R + +N++ ++ VEQ + ++ Q +EK ES+ L
Sbjct: 349 KIKDRVRRLERQIEDINEMTIRSTQVEQSEIEGKLNQLTVEVEKAESLVSSL 400
Score = 39 (18.8 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 11/55 (20%), Positives = 24/55 (43%)
Query: 493 DFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKE 547
D + K +KP + I + + + +I++++ L V+D +KE
Sbjct: 211 DEMEKTIKPIEKEINELLEKIKNMEHVEEITQQVLHLKKKLAWSWVYDVDRQLKE 265
>POMBASE|SPCC5E4.06 [details] [associations]
symbol:smc6 "Smc5-6 complex SMC subunit Smc6"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0030915 "Smc5-Smc6 complex"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0048478 "replication fork protection"
evidence=IC] InterPro:IPR027132 PomBase:SPCC5E4.06
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0000724
GO:GO:0048478 eggNOG:COG1196 GO:GO:0030915 EMBL:X80929
PANTHER:PTHR19306:SF2 PIR:T41457 RefSeq:NP_587906.1
ProteinModelPortal:P53692 IntAct:P53692 STRING:P53692 PRIDE:P53692
EnsemblFungi:SPCC5E4.06.1 GeneID:2539020 KEGG:spo:SPCC5E4.06
OMA:FVIGHNG OrthoDB:EOG486CMM NextBio:20800194 Uniprot:P53692
Length = 1140
Score = 180 (68.4 bits), Expect = 4.6e-19, Sum P(4) = 4.6e-19
Identities = 70/237 (29%), Positives = 112/237 (47%)
Query: 23 IIE-IELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIG 81
+IE I L NFM D L G R+N VIG NGSGKS+++ + + LG RA ++
Sbjct: 96 VIECIHLVNFMCHDSLKINFGPRINFVIGHNGSGKSAILTGLTICLGAKASNTNRAPNMK 155
Query: 82 AYVKRGEESGYIKISL--RG------DTKEEHLTIMRKIDTRNKSEW---FFNGKVVP-- 128
+ VK+G+ I +++ RG + + +TI R I SE+ FNG V+
Sbjct: 156 SLVKQGKNYARISVTISNRGFEAYQPEIYGKSITIERTIRREGSSEYRLRSFNGTVISTK 215
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEF-AKLSPVKLLEETEKAVGDPQLPVQHCALV 187
+ E+ I +Q++N L QD +F SP + + K + QL ++ +L+
Sbjct: 216 RDELDNICDHMGLQIDNPMNILTQDTARQFLGNSSPKEKYQLFMKGIQLKQLE-ENYSLI 274
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDV-ERVRQRAELLEKVESMKKKLPW 243
E+S + T V N T A E+ K + E+ R+ L +E K ++ W
Sbjct: 275 EQSL-INTKN--VLGNKKTGVSYLAKKEEEYKLLWEQSRETENLHNLLEQKKGEMVW 328
Score = 141 (54.7 bits), Expect = 4.6e-19, Sum P(4) = 4.6e-19
Identities = 75/381 (19%), Positives = 173/381 (45%)
Query: 654 EAAKLQKEREEIINIVQ-IEKR---KRREMEN----HIN-LRKRKLESIEKE-DDINTAL 703
E AK +++ + ++ ++ I+KR KRRE+ + ++ L K++++E+ + L
Sbjct: 742 EQAKFKRDEQLLVEKIEGIKKRILLKRREVNSLESQELSVLDTEKIQTLERRISETEKEL 801
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEI--VSCKWSYAEKHMASIEFD-AKIRE----LE 756
Q D ++ + + ++ EI K + ++S++ + +++R+ E
Sbjct: 802 ESYAGQLQDAKNEEHRIRDNQRPVIEEIRIYREKIQTETQRLSSLQTELSRLRDEKRNSE 861
Query: 757 FNLKQHEKLALQAS--LHYEDCKKEVEHCRKHLSD----AKRQAESIAF-ITP-ELEKEF 808
++++H + + L ++ KK V+ C + ++D A + E + ++P EL+ E
Sbjct: 862 VDIERHRQTVESCTNILREKEAKK-VQ-CAQVVADYTAKANTRCERVPVQLSPAELDNEI 919
Query: 809 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 868
+ I E ++ QA + N ++++ + + L+ +A ++ L+R
Sbjct: 920 ERLQMQIAEWRNRTGVSVEQAAEDYL---NAKEKHDQAKVLVARLTQLLQALEETLRR-- 974
Query: 869 AEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL-----IK 923
E W + + + E F + G++ + +H+ +F + + +
Sbjct: 975 -----RNEMWTKFRKLITLRTKELFELYLSQRNFTGKLVI-KHQEEFLEPRVYPANRNLA 1028
Query: 924 VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 983
+ + +V S SGGE+S +TI L+S+ + +CP R +DE + MD +N
Sbjct: 1029 TAHNRHEKSKV-SVQGLSGGEKSFATICMLLSIWEAMSCPLRCLDEFDVFMDAVNRLVSI 1087
Query: 984 QQLVRAASQPNTPQCFLLTPK 1004
+ +V +A + Q +TP+
Sbjct: 1088 KMMVDSAKDSSDKQFIFITPQ 1108
Score = 56 (24.8 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 177 PQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVES 236
P++ +E K+ ++ K+ NQL +EQ K +R Q L+EK+E
Sbjct: 705 PRIGFSSSTSIEAEKKI--LDDLKKQYNFASNQLNEAKIEQAK-FKRDEQL--LVEKIEG 759
Query: 237 MKKKL 241
+KK++
Sbjct: 760 IKKRI 764
Score = 55 (24.4 bits), Expect = 8.6e-10, Sum P(3) = 8.6e-10
Identities = 34/148 (22%), Positives = 68/148 (45%)
Query: 777 KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLN 836
+KE +H LS+AK ESI +++ + ++ EE+ + S F
Sbjct: 342 EKEFQHAEVKLSEAKENLESIVTNQSDIDGKI----SSKEEVIGRAKGETDTTKSKF--- 394
Query: 837 QNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR----NLV-AQINE 891
++I++ ++ + ++ D+ ++ + + + +D +E+ L T R NL +QI +
Sbjct: 395 EDIVKTFDGYRSEMNDVDIQKRDIQNSINAAKSCLDVYREQ-LNTERARENNLGGSQIEK 453
Query: 892 TF--SRNFQ-EMAVAGE--VSLDEHESD 914
S N Q E+A E V L+ +D
Sbjct: 454 RANESNNLQREIADLSEQIVELESKRND 481
Score = 51 (23.0 bits), Expect = 4.7e-10, Sum P(4) = 4.7e-10
Identities = 26/99 (26%), Positives = 52/99 (52%)
Query: 644 MQTE-QRL--IEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDI 699
+QTE QRL ++ E ++L+ E+ + V IE R R+ +E+ N LR+++ + ++ +
Sbjct: 836 IQTETQRLSSLQTELSRLRDEKRN--SEVDIE-RHRQTVESCTNILREKEAKKVQCAQVV 892
Query: 700 NTALAKLVDQAADLNIQQFKYAI--EIKNLLVEIVSCKW 736
AK + + +Q + EI+ L ++I +W
Sbjct: 893 ADYTAKANTRCERVPVQLSPAELDNEIERLQMQIA--EW 929
Score = 51 (23.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 11/51 (21%), Positives = 28/51 (54%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 419
+KI+ ++ L + ++ R +K E + +++ T+ C++ L++ E K
Sbjct: 834 EKIQTETQRLSSLQTELSRLRDEKRNSEVDIERHRQTVESCTNILREKEAK 884
Score = 50 (22.7 bits), Expect = 4.6e-19, Sum P(4) = 4.6e-19
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 384 QANQKRLQKSEKEKILNQNKLTLRQCSD---RLKDMEDKNNKLLHALRNSG 431
+A + L S+ EK N++ R+ +D ++ ++E K N L AL G
Sbjct: 440 RARENNLGGSQIEKRANESNNLQREIADLSEQIVELESKRNDLHSALLEMG 490
Score = 50 (22.7 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 15/56 (26%), Positives = 31/56 (55%)
Query: 654 EAAKLQKEREEIINIVQIEKR--KRREMENHI-NLRKRKLESIEKEDDINTALAKL 706
E ++ RE + QIEKR + ++ I +L ++ +E K +D+++AL ++
Sbjct: 434 EQLNTERARENNLGGSQIEKRANESNNLQREIADLSEQIVELESKRNDLHSALLEM 489
Score = 46 (21.3 bits), Expect = 4.6e-19, Sum P(4) = 4.6e-19
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 1 MDLPRVKRLKVSRGEDD 17
+DL VKR++ SR +D+
Sbjct: 35 VDLSNVKRIRASRNQDN 51
>GENEDB_PFALCIPARUM|MAL13P1.96 [details] [associations]
symbol:MAL13P1.96 "chromosome segregation
protein, putative" species:5833 "Plasmodium falciparum" [GO:0000070
"mitotic sister chromatid segregation" evidence=ISS]
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0046982 GO:GO:0007076 EMBL:AL844509
GO:GO:0000796 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 HSSP:P32908 HOGENOM:HOG000163792 OMA:CQNGKIP
RefSeq:XP_001349920.1 ProteinModelPortal:Q8IED2 IntAct:Q8IED2
MINT:MINT-1645015 PRIDE:Q8IED2 EnsemblProtists:MAL13P1.96:mRNA
GeneID:813987 KEGG:pfa:MAL13P1.96 EuPathDB:PlasmoDB:PF3D7_1318400
ProtClustDB:CLSZ2432256 Uniprot:Q8IED2
Length = 1218
Score = 191 (72.3 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 85/353 (24%), Positives = 162/353 (45%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREM-------ENHINLRKRKLESIEKEDDI-NTAL 703
ED ++K + +I + E +K+ E+ EN+ ++++ + D+I N
Sbjct: 809 EDLKETIKKLKNKIKQLETEEHKKKEEIDDVLLQIENYKKQKEKETNDLSSTDEIINEIE 868
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE--KHMAS-IE-FDAKIRELEFNL 759
K+ D ++NI + E++N + E+ S SY KH+ IE + K E +L
Sbjct: 869 KKIEDIEKNINITKENLK-ELENKITELQSSFSSYENEMKHVVKKIEDLEKKKSENILDL 927
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRK-HLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
K+ E L + V++ K H+ + TP + F I++
Sbjct: 928 KKLENTLLDLQKDLKTSSDTVKYLYKTHVWIESYEPLFNKKYTPYDFENFRH--DVIQKK 985
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQ---EADKKELKRFLAEIDALK 875
A+Q+ ++ + +N+ +Q YE Q +DL TK+ E DKK+++ +A++D K
Sbjct: 986 IQALQNEQNKLS--ININRKAVQMYEQVQVDYKDLVTKKSQVEEDKKKIQEVIADLDVKK 1043
Query: 876 EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL 935
+ +L + QINE F F + + L + D GI +K+ F + + E L
Sbjct: 1044 SE---SLLAMYQQINEYFQAIFSTLLNNAQAKLSIVDGDLAN-GIEMKIAFNNNWK-ESL 1098
Query: 936 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVR 988
+ SGG+RS+ + +++L + P ++DEI+ +D +N + ++R
Sbjct: 1099 T--ELSGGQRSLLALSLILALLKVRTVPMYILDEIDAALD-LNHTQNIGDMIR 1148
Score = 111 (44.1 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 56/282 (19%), Positives = 112/282 (39%)
Query: 23 IIEIELHNFMTFD-HLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I EI L F ++ + P + N + G NGSGKS+++ AI +G + L R +
Sbjct: 3 IEEIILDGFKSYPTKTVIGPFHPQFNAITGLNGSGKSNVLDAICFVMGINNLNLIRVNRL 62
Query: 81 GAYV-KRGEES---GYIKISLRGDTKE----------EHLTIMRKIDTRNKSEWFFNGKV 126
+ K+G+ G + I + K +++TI R+I ++ + N
Sbjct: 63 DELIYKQGQAGITKGSVTIKFNNEEKPSPLQEPYRDMKNITITRQIVLGGRNRYLLNSHN 122
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
++ + + + +NN + Q ++ + + P++LL E++ G V+
Sbjct: 123 AKPKDISDFFQSLKLNINNPHFLIMQGKITKVINMKPIELLGLIEESSGTKLYEVKRTNA 182
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
++ +K + + N +++ V+ +K+ E + E++E +K KY
Sbjct: 183 IKLM--VKKDQKLGEINKVLFEEIEPTLVKLKKEKEEYNKFVSNNEEIEKYEKVEIAYKY 240
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEK 288
+ K + E K IE K EK
Sbjct: 241 YVAKKMMTKCEEKIEDAKSEEKILEKGIKEIDKDIEKYKIEK 282
Score = 108 (43.1 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 56/255 (21%), Positives = 120/255 (47%)
Query: 653 DEAAKLQKEREEIINIVQIEKRKR---REM---ENHINLRKRKLE-----SIEKE-DDIN 700
D KL++ E++ ++ + E++K+ +E+ EN++N + ++E S+ K+ ++
Sbjct: 707 DNENKLKEVSEKLKSLEKAEEKKKIISKELQIYENNLNNIENRMETSKYGSVNKKIEEHK 766
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
+ K ++ ++L +Q K I+ L +I + A K + I++L+ +K
Sbjct: 767 NEIDKGRNELSELYKEQKKLTEVIRKLEKDISEYE---ANKDKKEEDLKETIKKLKNKIK 823
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI---EE 817
Q E + +D ++E+ +K S I E+EK+ ++ I +E
Sbjct: 824 QLETEEHKKKEEIDDVLLQIENYKKQKEKETNDLSSTDEIINEIEKKIEDIEKNINITKE 883
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+++ I++ S F +N E +H ++IEDL K+ + +LK+ + L +K
Sbjct: 884 NLKELENKITELQSSFSSYEN---EMKHVVKKIEDLEKKKSENILDLKKLENTLLDL-QK 939
Query: 878 WLPTLRNLVAQINET 892
L T + V + +T
Sbjct: 940 DLKTSSDTVKYLYKT 954
Score = 104 (41.7 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 37/178 (20%), Positives = 84/178 (47%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKR---REMENHINLRKRKLESIEKEDDINTALAKLV 707
IE+ ++ K R E+ + + +K+ R++E I+ + + +KE+D+ + KL
Sbjct: 762 IEEHKNEIDKGRNELSELYKEQKKLTEVIRKLEKDIS--EYEANKDKKEEDLKETIKKLK 819
Query: 708 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEF-DAKIRELEFNLKQHEKLA 766
++ L ++ K EI ++L++I + K EK + D I E+E ++ EK
Sbjct: 820 NKIKQLETEEHKKKEEIDDVLLQIENYK-KQKEKETNDLSSTDEIINEIEKKIEDIEKNI 878
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 824
+ ++ + ++ + S + + + + +LEK+ E +++LE + D
Sbjct: 879 NITKENLKELENKITELQSSFSSYENEMKHVVKKIEDLEKKKSENILDLKKLENTLLD 936
Score = 77 (32.2 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 49/232 (21%), Positives = 95/232 (40%)
Query: 668 IVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNL 727
++ EK K ++ + H N K K E EK + A K + +L I Y + N+
Sbjct: 692 LLNYEKYKHKKEQYHDNENKLK-EVSEKLKSLEKAEEKKKIISKELQI----YENNLNNI 746
Query: 728 LVEIVSCKWSYAEKHMASI--EFDAKIRELEFNLKQHEKLA-----LQASL-HYEDCKKE 779
+ + K+ K + E D EL K+ +KL L+ + YE K +
Sbjct: 747 ENRMETSKYGSVNKKIEEHKNEIDKGRNELSELYKEQKKLTEVIRKLEKDISEYEANKDK 806
Query: 780 VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI 839
E K K+ I + E K+ E+ + ++E + + N + ++ I
Sbjct: 807 KEEDLKET--IKKLKNKIKQLETEEHKKKEEIDDVLLQIENYKKQKEKETNDLSSTDE-I 863
Query: 840 LQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 891
+ E E + IE + + KEL+ + E+ + + ++++V +I +
Sbjct: 864 INEIEKKIEDIEKNINITKENLKELENKITELQSSFSSYENEMKHVVKKIED 915
Score = 73 (30.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 38/201 (18%), Positives = 93/201 (46%)
Query: 644 MQTEQRLIEDEAAKLQKEREEI---INIVQ--IEKRKRREMENHINLR-----KRKLESI 693
+++E ++ E AK ++ RE+I IN +Q ++ ++ +N+ NL+ K+K+E +
Sbjct: 313 LKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQKNNEKNNKNLKSYEDLKKKIEIL 372
Query: 694 EKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 752
++E ++ + L+ + N + ++KN + + + + +I
Sbjct: 373 KEELNEKQLTMNCLLSAGTNNNEYTGSFREQLKNYKTNLSKAETQINNFLQNNKHLEKEI 432
Query: 753 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFI-TPELEKEFLEM 811
L+ K++EK + S + +K+ + C + L ++ + + T + +K L
Sbjct: 433 MTLKEQRKKYEKEYNEISKEKDIEEKKKKLCEQELDKLNKEYNNFMELDTLKTDKNILY- 491
Query: 812 PTTIEELEAAIQDNISQANSI 832
+E+L+ +Q + NS+
Sbjct: 492 -NDMEKLQQELQVLKNIINSV 511
Score = 71 (30.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 33/162 (20%), Positives = 67/162 (41%)
Query: 646 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAK 705
+++ +E + ++L+ E + EKR+R +++ IN + KL+ +K ++ N K
Sbjct: 301 SQKEELEKKISQLKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQKNNEKNNKNLK 360
Query: 706 LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 765
+ I+ K + K L + +C S + E+ RE LK ++
Sbjct: 361 SYEDLKK-KIEILKEELNEKQLTM---NCLLSAGTNNN---EYTGSFRE---QLKNYKTN 410
Query: 766 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE 807
+A + + +H K + K Q + E+ KE
Sbjct: 411 LSKAETQINNFLQNNKHLEKEIMTLKEQRKKYEKEYNEISKE 452
Score = 63 (27.2 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 370 KIEKLGSQI-LELGVQANQKRLQKSEKEKILN-QNKLTLRQCSDRLKDMEDKNNKLLHAL 427
KI +L S+ +E +A +KR ++ K++I N QNKL D K+ E KNNK L +
Sbjct: 309 KISQLKSEAKMENKEKAKEKRRREDIKKEINNLQNKL-----DDYQKNNE-KNNKNLKSY 362
Query: 428 RNSGAENIFEAYCWLQQHRHELN-KEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 486
E++ + ++ + ELN K+ LL +N + + + +Y K+ ++
Sbjct: 363 -----EDLKKK---IEILKEELNEKQLTMNCLLSAGTNNNEYTGSFREQLKNY--KTNLS 412
Query: 487 Q-DAGDRDFLAKNLKPFDVPILNYVSNESS-RKEPFQISEE 525
+ + +FL N K + I+ KE +IS+E
Sbjct: 413 KAETQINNFLQNN-KHLEKEIMTLKEQRKKYEKEYNEISKE 452
Score = 60 (26.2 bits), Expect = 5.7e-18, Sum P(3) = 5.7e-18
Identities = 23/88 (26%), Positives = 40/88 (45%)
Query: 369 DKIEKLGSQ--ILELGVQANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
+KIE S+ ILE G++ K ++K EKEKI+ + + E+ K+
Sbjct: 252 EKIEDAKSEEKILEKGIKEIDKDIEKYKIEKEKIVKETNTASEPMKILISQKEELEKKIS 311
Query: 425 HALRNSGAENIFEAYCWLQQHRHELNKE 452
+ EN +A ++ R ++ KE
Sbjct: 312 QLKSEAKMENKEKAK--EKRRREDIKKE 337
Score = 60 (26.2 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 35/183 (19%), Positives = 80/183 (43%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA-- 702
+ E ++ E +++ E E + +IE ++++ EN ++L+K + ++ + D+ T+
Sbjct: 887 ELENKITELQSSFSSYENEMKHVVKKIEDLEKKKSENILDLKKLENTLLDLQKDLKTSSD 946
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
K + + + I+ ++ K + + + +K + +++ + + N K
Sbjct: 947 TVKYLYKT-HVWIESYEPLFNKKYTPYDFENFRHDVIQKKIQALQNEQNKLSININRKAV 1005
Query: 763 EKLALQASLHYEDC---KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
+ Q + Y+D K +VE D K+ E IA + + + L M I E
Sbjct: 1006 QMYE-QVQVDYKDLVTKKSQVEE------DKKKIQEVIADLDVKKSESLLAMYQQINEYF 1058
Query: 820 AAI 822
AI
Sbjct: 1059 QAI 1061
Score = 60 (26.2 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 48/220 (21%), Positives = 92/220 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
++ E ++++ K +KE EI IE++K++ E ++ ++ + + D + T
Sbjct: 428 LEKEIMTLKEQRKKYEKEYNEISKEKDIEEKKKKLCEQELDKLNKEYNNFMELDTLKTDK 487
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYA-EKHMASIEFDAKIREL-----EF 757
L + L Q+ + +KN+ I S K Y +M S + +I +L E+
Sbjct: 488 NILYNDMEKLQ-QELQV---LKNI---INSVKIDYKIPSNMKSTDVLGQIYKLIKIKKEY 540
Query: 758 -NLKQHEKLALQASLHYEDCKKEVEHCRK-----HLSDAKRQAESIAFITPELEKEFLEM 811
N L L L Y + + EH ++ + S ++ + + +E E
Sbjct: 541 INTALAVHLILGGKLTYLLVQNK-EHSKRLFEYNNFSSGSKRVTLLPLEDCVISREVHEK 599
Query: 812 PTTIEELEAAIQDNISQANS-IFFLNQNILQEYEHRQRQI 850
IEE + NI N I+FL+ + EY+ +I
Sbjct: 600 H--IEECRRNVGLNIKDKNDVIYFLD---IMEYDKNLERI 634
Score = 56 (24.8 bits), Expect = 4.8e-11, Sum P(3) = 4.8e-11
Identities = 22/84 (26%), Positives = 43/84 (51%)
Query: 163 PVKLL----EETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL-NQLKALNVEQ 217
P+K+L EE EK + QL + ++ +K K +K+ + L N+L
Sbjct: 295 PMKILISQKEELEKKIS--QLKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQKNN 352
Query: 218 EKDVERVRQRAELLEKVESMKKKL 241
EK+ + ++ +L +K+E +K++L
Sbjct: 353 EKNNKNLKSYEDLKKKIEILKEEL 376
Score = 56 (24.8 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 26/143 (18%), Positives = 59/143 (41%)
Query: 753 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPEL---EKEFL 809
+ + L +EK + Y D + +++ + L ++ E I+ EL E
Sbjct: 686 KNINLFLLNYEKYKHKKE-QYHDNENKLKEVSEKLKSLEKAEEKKKIISKELQIYENNLN 744
Query: 810 EMPTTIEELE-AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 868
+ +E + ++ I + + +N L E Q+++ ++ K E K++ +
Sbjct: 745 NIENRMETSKYGSVNKKIEEHKNEIDKGRNELSELYKEQKKLTEVIRKLE---KDISEYE 801
Query: 869 AEIDALKEKWLPTLRNLVAQINE 891
A D +E T++ L +I +
Sbjct: 802 ANKDKKEEDLKETIKKLKNKIKQ 824
Score = 51 (23.0 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
+ S+ K +E +K + + K +E+EK V+ +E L+ + E ++KK+
Sbjct: 256 DAKSEEKILEKGIKEIDKDIEKYK---IEKEKIVKETNTASEPMKILISQKEELEKKISQ 312
Query: 244 LKYD--MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILD-GDCKKLSS 300
LK + M+ E N L ++ K +K K + D KK
Sbjct: 313 LKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQK--NNEKNNKNLKSYEDLKKKIE 370
Query: 301 LINE--NSKR 308
++ E N K+
Sbjct: 371 ILKEELNEKQ 380
Score = 47 (21.6 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
+KL I +L ++ K +KE+ L + T+++ +++K +E + +K
Sbjct: 784 KKLTEVIRKLEKDISEYEANKDKKEEDLKE---TIKKLKNKIKQLETEEHK 831
Score = 45 (20.9 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 392 KSEKEKIL-NQNKLTLRQCSDRLKDMEDKNNK 422
K +KE+ N+NKL ++ S++LK +E K
Sbjct: 699 KHKKEQYHDNENKL--KEVSEKLKSLEKAEEK 728
Score = 45 (20.9 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 19/92 (20%), Positives = 38/92 (41%)
Query: 216 EQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLH 275
+ E ++ V ++ + LEK E KKK+ + +++ E +
Sbjct: 707 DNENKLKEVSEKLKSLEKAEE-KKKI--ISKELQIYENNLNNIENRMETSKYGSVNKKIE 763
Query: 276 EFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
E I+ + E + L + KKL+ +I + K
Sbjct: 764 EHKNEIDKGRNELSELYKEQKKLTEVIRKLEK 795
Score = 45 (20.9 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 191 SKLKT-IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
SK +T I ++ N ++ L EQ K E+ + +E KKKL + D
Sbjct: 412 SKAETQINNFLQNNKHLEKEIMTLK-EQRKKYEKEYNEISKEKDIEEKKKKLCEQELDKL 470
Query: 250 KAEY 253
EY
Sbjct: 471 NKEY 474
Score = 40 (19.1 bits), Expect = 6.3e-16, Sum P(3) = 6.3e-16
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLK 414
DK+ K + +EL K + ++ EK L Q L+ + +K
Sbjct: 468 DKLNKEYNNFMELDTLKTDKNILYNDMEK-LQQELQVLKNIINSVK 512
Score = 38 (18.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 427 LRNSGAENIFEAYCWL 442
L SG N+ +A C++
Sbjct: 33 LNGSGKSNVLDAICFV 48
>UNIPROTKB|Q8IED2 [details] [associations]
symbol:MAL13P1.96 "Structural maintenance of chromosomes
protein 2" species:36329 "Plasmodium falciparum 3D7" [GO:0000070
"mitotic sister chromatid segregation" evidence=ISS] [GO:0000796
"condensin complex" evidence=ISS] [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0051301 GO:GO:0046982
GO:GO:0007076 EMBL:AL844509 GO:GO:0000796 eggNOG:COG1196
SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9 HSSP:P32908
HOGENOM:HOG000163792 OMA:CQNGKIP RefSeq:XP_001349920.1
ProteinModelPortal:Q8IED2 IntAct:Q8IED2 MINT:MINT-1645015
PRIDE:Q8IED2 EnsemblProtists:MAL13P1.96:mRNA GeneID:813987
KEGG:pfa:MAL13P1.96 EuPathDB:PlasmoDB:PF3D7_1318400
ProtClustDB:CLSZ2432256 Uniprot:Q8IED2
Length = 1218
Score = 191 (72.3 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 85/353 (24%), Positives = 162/353 (45%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREM-------ENHINLRKRKLESIEKEDDI-NTAL 703
ED ++K + +I + E +K+ E+ EN+ ++++ + D+I N
Sbjct: 809 EDLKETIKKLKNKIKQLETEEHKKKEEIDDVLLQIENYKKQKEKETNDLSSTDEIINEIE 868
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE--KHMAS-IE-FDAKIRELEFNL 759
K+ D ++NI + E++N + E+ S SY KH+ IE + K E +L
Sbjct: 869 KKIEDIEKNINITKENLK-ELENKITELQSSFSSYENEMKHVVKKIEDLEKKKSENILDL 927
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRK-HLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
K+ E L + V++ K H+ + TP + F I++
Sbjct: 928 KKLENTLLDLQKDLKTSSDTVKYLYKTHVWIESYEPLFNKKYTPYDFENFRH--DVIQKK 985
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQ---EADKKELKRFLAEIDALK 875
A+Q+ ++ + +N+ +Q YE Q +DL TK+ E DKK+++ +A++D K
Sbjct: 986 IQALQNEQNKLS--ININRKAVQMYEQVQVDYKDLVTKKSQVEEDKKKIQEVIADLDVKK 1043
Query: 876 EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL 935
+ +L + QINE F F + + L + D GI +K+ F + + E L
Sbjct: 1044 SE---SLLAMYQQINEYFQAIFSTLLNNAQAKLSIVDGDLAN-GIEMKIAFNNNWK-ESL 1098
Query: 936 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVR 988
+ SGG+RS+ + +++L + P ++DEI+ +D +N + ++R
Sbjct: 1099 T--ELSGGQRSLLALSLILALLKVRTVPMYILDEIDAALD-LNHTQNIGDMIR 1148
Score = 111 (44.1 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 56/282 (19%), Positives = 112/282 (39%)
Query: 23 IIEIELHNFMTFD-HLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I EI L F ++ + P + N + G NGSGKS+++ AI +G + L R +
Sbjct: 3 IEEIILDGFKSYPTKTVIGPFHPQFNAITGLNGSGKSNVLDAICFVMGINNLNLIRVNRL 62
Query: 81 GAYV-KRGEES---GYIKISLRGDTKE----------EHLTIMRKIDTRNKSEWFFNGKV 126
+ K+G+ G + I + K +++TI R+I ++ + N
Sbjct: 63 DELIYKQGQAGITKGSVTIKFNNEEKPSPLQEPYRDMKNITITRQIVLGGRNRYLLNSHN 122
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
++ + + + +NN + Q ++ + + P++LL E++ G V+
Sbjct: 123 AKPKDISDFFQSLKLNINNPHFLIMQGKITKVINMKPIELLGLIEESSGTKLYEVKRTNA 182
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
++ +K + + N +++ V+ +K+ E + E++E +K KY
Sbjct: 183 IKLM--VKKDQKLGEINKVLFEEIEPTLVKLKKEKEEYNKFVSNNEEIEKYEKVEIAYKY 240
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEK 288
+ K + E K IE K EK
Sbjct: 241 YVAKKMMTKCEEKIEDAKSEEKILEKGIKEIDKDIEKYKIEK 282
Score = 108 (43.1 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 56/255 (21%), Positives = 120/255 (47%)
Query: 653 DEAAKLQKEREEIINIVQIEKRKR---REM---ENHINLRKRKLE-----SIEKE-DDIN 700
D KL++ E++ ++ + E++K+ +E+ EN++N + ++E S+ K+ ++
Sbjct: 707 DNENKLKEVSEKLKSLEKAEEKKKIISKELQIYENNLNNIENRMETSKYGSVNKKIEEHK 766
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
+ K ++ ++L +Q K I+ L +I + A K + I++L+ +K
Sbjct: 767 NEIDKGRNELSELYKEQKKLTEVIRKLEKDISEYE---ANKDKKEEDLKETIKKLKNKIK 823
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI---EE 817
Q E + +D ++E+ +K S I E+EK+ ++ I +E
Sbjct: 824 QLETEEHKKKEEIDDVLLQIENYKKQKEKETNDLSSTDEIINEIEKKIEDIEKNINITKE 883
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+++ I++ S F +N E +H ++IEDL K+ + +LK+ + L +K
Sbjct: 884 NLKELENKITELQSSFSSYEN---EMKHVVKKIEDLEKKKSENILDLKKLENTLLDL-QK 939
Query: 878 WLPTLRNLVAQINET 892
L T + V + +T
Sbjct: 940 DLKTSSDTVKYLYKT 954
Score = 104 (41.7 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 37/178 (20%), Positives = 84/178 (47%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKR---REMENHINLRKRKLESIEKEDDINTALAKLV 707
IE+ ++ K R E+ + + +K+ R++E I+ + + +KE+D+ + KL
Sbjct: 762 IEEHKNEIDKGRNELSELYKEQKKLTEVIRKLEKDIS--EYEANKDKKEEDLKETIKKLK 819
Query: 708 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEF-DAKIRELEFNLKQHEKLA 766
++ L ++ K EI ++L++I + K EK + D I E+E ++ EK
Sbjct: 820 NKIKQLETEEHKKKEEIDDVLLQIENYK-KQKEKETNDLSSTDEIINEIEKKIEDIEKNI 878
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 824
+ ++ + ++ + S + + + + +LEK+ E +++LE + D
Sbjct: 879 NITKENLKELENKITELQSSFSSYENEMKHVVKKIEDLEKKKSENILDLKKLENTLLD 936
Score = 77 (32.2 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 49/232 (21%), Positives = 95/232 (40%)
Query: 668 IVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNL 727
++ EK K ++ + H N K K E EK + A K + +L I Y + N+
Sbjct: 692 LLNYEKYKHKKEQYHDNENKLK-EVSEKLKSLEKAEEKKKIISKELQI----YENNLNNI 746
Query: 728 LVEIVSCKWSYAEKHMASI--EFDAKIRELEFNLKQHEKLA-----LQASL-HYEDCKKE 779
+ + K+ K + E D EL K+ +KL L+ + YE K +
Sbjct: 747 ENRMETSKYGSVNKKIEEHKNEIDKGRNELSELYKEQKKLTEVIRKLEKDISEYEANKDK 806
Query: 780 VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI 839
E K K+ I + E K+ E+ + ++E + + N + ++ I
Sbjct: 807 KEEDLKET--IKKLKNKIKQLETEEHKKKEEIDDVLLQIENYKKQKEKETNDLSSTDE-I 863
Query: 840 LQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 891
+ E E + IE + + KEL+ + E+ + + ++++V +I +
Sbjct: 864 INEIEKKIEDIEKNINITKENLKELENKITELQSSFSSYENEMKHVVKKIED 915
Score = 73 (30.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 38/201 (18%), Positives = 93/201 (46%)
Query: 644 MQTEQRLIEDEAAKLQKEREEI---INIVQ--IEKRKRREMENHINLR-----KRKLESI 693
+++E ++ E AK ++ RE+I IN +Q ++ ++ +N+ NL+ K+K+E +
Sbjct: 313 LKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQKNNEKNNKNLKSYEDLKKKIEIL 372
Query: 694 EKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 752
++E ++ + L+ + N + ++KN + + + + +I
Sbjct: 373 KEELNEKQLTMNCLLSAGTNNNEYTGSFREQLKNYKTNLSKAETQINNFLQNNKHLEKEI 432
Query: 753 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFI-TPELEKEFLEM 811
L+ K++EK + S + +K+ + C + L ++ + + T + +K L
Sbjct: 433 MTLKEQRKKYEKEYNEISKEKDIEEKKKKLCEQELDKLNKEYNNFMELDTLKTDKNILY- 491
Query: 812 PTTIEELEAAIQDNISQANSI 832
+E+L+ +Q + NS+
Sbjct: 492 -NDMEKLQQELQVLKNIINSV 511
Score = 71 (30.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 33/162 (20%), Positives = 67/162 (41%)
Query: 646 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAK 705
+++ +E + ++L+ E + EKR+R +++ IN + KL+ +K ++ N K
Sbjct: 301 SQKEELEKKISQLKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQKNNEKNNKNLK 360
Query: 706 LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 765
+ I+ K + K L + +C S + E+ RE LK ++
Sbjct: 361 SYEDLKK-KIEILKEELNEKQLTM---NCLLSAGTNNN---EYTGSFRE---QLKNYKTN 410
Query: 766 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE 807
+A + + +H K + K Q + E+ KE
Sbjct: 411 LSKAETQINNFLQNNKHLEKEIMTLKEQRKKYEKEYNEISKE 452
Score = 63 (27.2 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 370 KIEKLGSQI-LELGVQANQKRLQKSEKEKILN-QNKLTLRQCSDRLKDMEDKNNKLLHAL 427
KI +L S+ +E +A +KR ++ K++I N QNKL D K+ E KNNK L +
Sbjct: 309 KISQLKSEAKMENKEKAKEKRRREDIKKEINNLQNKL-----DDYQKNNE-KNNKNLKSY 362
Query: 428 RNSGAENIFEAYCWLQQHRHELN-KEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 486
E++ + ++ + ELN K+ LL +N + + + +Y K+ ++
Sbjct: 363 -----EDLKKK---IEILKEELNEKQLTMNCLLSAGTNNNEYTGSFREQLKNY--KTNLS 412
Query: 487 Q-DAGDRDFLAKNLKPFDVPILNYVSNESS-RKEPFQISEE 525
+ + +FL N K + I+ KE +IS+E
Sbjct: 413 KAETQINNFLQNN-KHLEKEIMTLKEQRKKYEKEYNEISKE 452
Score = 60 (26.2 bits), Expect = 5.7e-18, Sum P(3) = 5.7e-18
Identities = 23/88 (26%), Positives = 40/88 (45%)
Query: 369 DKIEKLGSQ--ILELGVQANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
+KIE S+ ILE G++ K ++K EKEKI+ + + E+ K+
Sbjct: 252 EKIEDAKSEEKILEKGIKEIDKDIEKYKIEKEKIVKETNTASEPMKILISQKEELEKKIS 311
Query: 425 HALRNSGAENIFEAYCWLQQHRHELNKE 452
+ EN +A ++ R ++ KE
Sbjct: 312 QLKSEAKMENKEKAK--EKRRREDIKKE 337
Score = 60 (26.2 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 35/183 (19%), Positives = 80/183 (43%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA-- 702
+ E ++ E +++ E E + +IE ++++ EN ++L+K + ++ + D+ T+
Sbjct: 887 ELENKITELQSSFSSYENEMKHVVKKIEDLEKKKSENILDLKKLENTLLDLQKDLKTSSD 946
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
K + + + I+ ++ K + + + +K + +++ + + N K
Sbjct: 947 TVKYLYKT-HVWIESYEPLFNKKYTPYDFENFRHDVIQKKIQALQNEQNKLSININRKAV 1005
Query: 763 EKLALQASLHYEDC---KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
+ Q + Y+D K +VE D K+ E IA + + + L M I E
Sbjct: 1006 QMYE-QVQVDYKDLVTKKSQVEE------DKKKIQEVIADLDVKKSESLLAMYQQINEYF 1058
Query: 820 AAI 822
AI
Sbjct: 1059 QAI 1061
Score = 60 (26.2 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 48/220 (21%), Positives = 92/220 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
++ E ++++ K +KE EI IE++K++ E ++ ++ + + D + T
Sbjct: 428 LEKEIMTLKEQRKKYEKEYNEISKEKDIEEKKKKLCEQELDKLNKEYNNFMELDTLKTDK 487
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYA-EKHMASIEFDAKIREL-----EF 757
L + L Q+ + +KN+ I S K Y +M S + +I +L E+
Sbjct: 488 NILYNDMEKLQ-QELQV---LKNI---INSVKIDYKIPSNMKSTDVLGQIYKLIKIKKEY 540
Query: 758 -NLKQHEKLALQASLHYEDCKKEVEHCRK-----HLSDAKRQAESIAFITPELEKEFLEM 811
N L L L Y + + EH ++ + S ++ + + +E E
Sbjct: 541 INTALAVHLILGGKLTYLLVQNK-EHSKRLFEYNNFSSGSKRVTLLPLEDCVISREVHEK 599
Query: 812 PTTIEELEAAIQDNISQANS-IFFLNQNILQEYEHRQRQI 850
IEE + NI N I+FL+ + EY+ +I
Sbjct: 600 H--IEECRRNVGLNIKDKNDVIYFLD---IMEYDKNLERI 634
Score = 56 (24.8 bits), Expect = 4.8e-11, Sum P(3) = 4.8e-11
Identities = 22/84 (26%), Positives = 43/84 (51%)
Query: 163 PVKLL----EETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL-NQLKALNVEQ 217
P+K+L EE EK + QL + ++ +K K +K+ + L N+L
Sbjct: 295 PMKILISQKEELEKKIS--QLKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQKNN 352
Query: 218 EKDVERVRQRAELLEKVESMKKKL 241
EK+ + ++ +L +K+E +K++L
Sbjct: 353 EKNNKNLKSYEDLKKKIEILKEEL 376
Score = 56 (24.8 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 26/143 (18%), Positives = 59/143 (41%)
Query: 753 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPEL---EKEFL 809
+ + L +EK + Y D + +++ + L ++ E I+ EL E
Sbjct: 686 KNINLFLLNYEKYKHKKE-QYHDNENKLKEVSEKLKSLEKAEEKKKIISKELQIYENNLN 744
Query: 810 EMPTTIEELE-AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 868
+ +E + ++ I + + +N L E Q+++ ++ K E K++ +
Sbjct: 745 NIENRMETSKYGSVNKKIEEHKNEIDKGRNELSELYKEQKKLTEVIRKLE---KDISEYE 801
Query: 869 AEIDALKEKWLPTLRNLVAQINE 891
A D +E T++ L +I +
Sbjct: 802 ANKDKKEEDLKETIKKLKNKIKQ 824
Score = 51 (23.0 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
+ S+ K +E +K + + K +E+EK V+ +E L+ + E ++KK+
Sbjct: 256 DAKSEEKILEKGIKEIDKDIEKYK---IEKEKIVKETNTASEPMKILISQKEELEKKISQ 312
Query: 244 LKYD--MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILD-GDCKKLSS 300
LK + M+ E N L ++ K +K K + D KK
Sbjct: 313 LKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQK--NNEKNNKNLKSYEDLKKKIE 370
Query: 301 LINE--NSKR 308
++ E N K+
Sbjct: 371 ILKEELNEKQ 380
Score = 47 (21.6 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
+KL I +L ++ K +KE+ L + T+++ +++K +E + +K
Sbjct: 784 KKLTEVIRKLEKDISEYEANKDKKEEDLKE---TIKKLKNKIKQLETEEHK 831
Score = 45 (20.9 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 392 KSEKEKIL-NQNKLTLRQCSDRLKDMEDKNNK 422
K +KE+ N+NKL ++ S++LK +E K
Sbjct: 699 KHKKEQYHDNENKL--KEVSEKLKSLEKAEEK 728
Score = 45 (20.9 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 19/92 (20%), Positives = 38/92 (41%)
Query: 216 EQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLH 275
+ E ++ V ++ + LEK E KKK+ + +++ E +
Sbjct: 707 DNENKLKEVSEKLKSLEKAEE-KKKI--ISKELQIYENNLNNIENRMETSKYGSVNKKIE 763
Query: 276 EFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
E I+ + E + L + KKL+ +I + K
Sbjct: 764 EHKNEIDKGRNELSELYKEQKKLTEVIRKLEK 795
Score = 45 (20.9 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 191 SKLKT-IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
SK +T I ++ N ++ L EQ K E+ + +E KKKL + D
Sbjct: 412 SKAETQINNFLQNNKHLEKEIMTLK-EQRKKYEKEYNEISKEKDIEEKKKKLCEQELDKL 470
Query: 250 KAEY 253
EY
Sbjct: 471 NKEY 474
Score = 40 (19.1 bits), Expect = 6.3e-16, Sum P(3) = 6.3e-16
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLK 414
DK+ K + +EL K + ++ EK L Q L+ + +K
Sbjct: 468 DKLNKEYNNFMELDTLKTDKNILYNDMEK-LQQELQVLKNIINSVK 512
Score = 38 (18.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 427 LRNSGAENIFEAYCWL 442
L SG N+ +A C++
Sbjct: 33 LNGSGKSNVLDAICFV 48
>CGD|CAL0003255 [details] [associations]
symbol:SMC6 species:5476 "Candida albicans" [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0030915 "Smc5-Smc6 complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0071139 "resolution of recombination
intermediates" evidence=IEA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA]
InterPro:IPR027132 CGD:CAL0003255 EMBL:AACQ01000020
EMBL:AACQ01000016 eggNOG:COG1196 PANTHER:PTHR19306:SF2
RefSeq:XP_720891.1 RefSeq:XP_721404.1 RefSeq:XP_888781.1
ProteinModelPortal:Q5AGX1 STRING:Q5AGX1 GeneID:3637039
GeneID:3637516 GeneID:3704092 KEGG:cal:CaO19.13921
KEGG:cal:CaO19.6568 KEGG:cal:CaO19_6568 Uniprot:Q5AGX1
Length = 1128
Score = 181 (68.8 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 99/448 (22%), Positives = 168/448 (37%)
Query: 14 GEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQL 73
G D G I ++ L NFM D K G +LN +IG NGSGKS+++ I++ LG
Sbjct: 97 GSDPAKAGVIEKLTLKNFMCHDSFELKLGPQLNFIIGRNGSGKSAILTGISVGLGAKATD 156
Query: 74 LGRATSIGAYVKRGEESGYIKISLRGDTKEEH--------LTIMRKIDTRNKSEWFFN-- 123
R ++I +K G+ + I + L+ + + + + I RK+ + +
Sbjct: 157 TNRGSTIRDLIKDGKSTSRITVVLKNEGSDAYKPDVFGKKIIIERKLQRSGSNTYSIKNE 216
Query: 124 -GKVVP-KGEVL-EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK-LLEETEKAVGDPQL 179
GKVV K VL EI +F+I ++N FL QD+ EF S K E +
Sbjct: 217 AGKVVSNKKSVLDEILYKFSITIDNPLAFLSQDKAREFLTSSSDKNKYEYFMDGAFITDI 276
Query: 180 PVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV----RQRAELLEKVE 235
+ ++ S+ ++ ++ V++ + K ++ K + +V R L K+E
Sbjct: 277 LENYTSI---SNNVQVLDNKVRQAEEYTKVAK----QEYKAIAKVHNAHRTNDALRNKLE 329
Query: 236 SMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDC 295
+ K+ W + + N + K IE K K D
Sbjct: 330 MLNAKIYWFNVQTIEKKIDQENRQKDTCLQEIEQAKNQIDVCEKEIEAKIPRKDAADQQV 389
Query: 296 KKLSSLINENSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXX 355
K++ S I + + K K I +
Sbjct: 390 KEVESQIKDIVEEFEGLRSKRSEMKSELEINKKETKKNIDEMNSLKEDITRTETKIEQER 449
Query: 356 XXXQTVPA--YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL 413
Q + E +++EKL S+I EL Q + Q E + N + LR S +
Sbjct: 450 RRIQELQGGNKEKMAEELEKLNSEIDELESQLENLKKQLVEMQD--NPDP-ELRSVSQQR 506
Query: 414 KDMEDKNNKLLHALRNSGAENIFEAYCW 441
+ K L + R E++ + W
Sbjct: 507 EKSRQKIADLQNQKRQLEKESVSKYSPW 534
Score = 132 (51.5 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 75/353 (21%), Positives = 155/353 (43%)
Query: 667 NIVQIEKRKRREMENHINLRK--RKLESIEKE-DDINTALAKLV--DQAADLNIQQFKYA 721
N+ Q+ KR R +E+ + + + ++E +D N + +LV ++A N+ Q
Sbjct: 765 NLDQL-KRNRSTLEDQLEVEVDYSNITTLEARIEDNNEQIRRLVALNEALLENLSQMNE- 822
Query: 722 IEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQASLHYEDCKKEV 780
K+L +I CK S KH E F ++ E+E ++ E L + + + +
Sbjct: 823 -NYKDLKQQIEDCK-SKKVKHETIREKFVKQLVEIETEIETQEDLKKRYLYKITELEDRI 880
Query: 781 EHCRKHLSDAKRQAES-IAFITPELEKEFLEM-PTTIEELEAA-IQD---NISQANSIFF 834
+ L++ R+ E +A ++ + + P +E A Q+ ++ +A S
Sbjct: 881 KRADDILAEGNRKLEEFVAKAEEHCSRDRVTIYPNDTQETIAQDYQETRFDLERAESALG 940
Query: 835 LN-QNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL-RNLVAQINET 892
+ + +L + E + + + + E+ ++ AE++A + +L T+ ++ + + T
Sbjct: 941 TSLEEVLDQLEKAKAKCDKAEGELESLSSASRKLNAEVNA-RFNFLHTIIQSSIQEAKRT 999
Query: 893 FSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL-SAHHQSGGERSVSTIL 951
F + G + D F + + + V Q+G E + SGGE+S S I
Sbjct: 1000 FEKAMWLRGFQGTLKFD-----FAEKTLQLNV---QTGNDEKKRTVESLSGGEKSFSQIA 1051
Query: 952 YLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPK 1004
L+S+ + N R +DE + MD +N + L++ + Q +TP+
Sbjct: 1052 LLLSIWKVMNSRIRGLDEFDVYMDSVNRSISIKLLLKELKRYPKSQNIFITPQ 1104
Score = 101 (40.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 95/453 (20%), Positives = 165/453 (36%)
Query: 75 GRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFN---GKVVP-KG 130
G++TS V + E S K + G + + I RK+ + + GKVV K
Sbjct: 170 GKSTSRITVVLKNEGSDAYKPDVFG----KKIIIERKLQRSGSNTYSIKNEAGKVVSNKK 225
Query: 131 EVL-EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK-LLEETEKAVGDPQLPVQHCALVE 188
VL EI +F+I ++N FL QD+ EF S K E + + ++
Sbjct: 226 SVLDEILYKFSITIDNPLAFLSQDKAREFLTSSSDKNKYEYFMDGAFITDILENYTSI-- 283
Query: 189 KSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV----RQRAELLEKVESMKKKLPWL 244
S+ ++ ++ V++ + K ++ K + +V R L K+E + K+ W
Sbjct: 284 -SNNVQVLDNKVRQAEEYTKVAK----QEYKAIAKVHNAHRTNDALRNKLEMLNAKIYWF 338
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINE 304
+ + N + K IE K K D K++ S I +
Sbjct: 339 NVQTIEKKIDQENRQKDTCLQEIEQAKNQIDVCEKEIEAKIPRKDAADQQVKEVESQIKD 398
Query: 305 NSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPA- 363
+ K K I + Q +
Sbjct: 399 IVEEFEGLRSKRSEMKSELEINKKETKKNIDEMNSLKEDITRTETKIEQERRRIQELQGG 458
Query: 364 -YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
E +++EKL S+I EL Q + Q E + N + LR S + + K
Sbjct: 459 NKEKMAEELEKLNSEIDELESQLENLKKQLVEMQD--NPDP-ELRSVSQQREKSRQKIAD 515
Query: 423 LLHALRNSGAENIFEAYCWLQQ--------HRH-ELNKEAYGPVLLEVNVSNRAHANY-- 471
L + R E++ + W + RH + +E GP+ ++V N+ + N+
Sbjct: 516 LQNQKRQLEKESVSKYSPWGSRMAELIKAIKRHPDWVQEPIGPIGSYIHVKNQ-YNNWKP 574
Query: 472 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDV 504
L + + SFI + GDR L + LK + +
Sbjct: 575 LLSTILNKTLDSFIVTNEGDRSRLDRLLKQYQI 607
Score = 78 (32.5 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 48/200 (24%), Positives = 96/200 (48%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+ D + LQ+E +E E R + ++E K KL++ K D++ + ++ + +
Sbjct: 716 MSDLISDLQRELDE-------EHRHQNDLERRARSIKMKLDA--KRDNL-VSESRAIKRN 765
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFD-AKIREL-EFNLKQHEKLALQ 768
D +++ + +E L VE+ +S A IE + +IR L N E L+ Q
Sbjct: 766 LD-QLKRNRSTLE-DQLEVEV---DYSNITTLEARIEDNNEQIRRLVALNEALLENLS-Q 819
Query: 769 ASLHYEDCKKEVEHCR----KHLSDAKRQAESIAFITPELE-KEFLEMPTTIEELEAAIQ 823
+ +Y+D K+++E C+ KH + ++ + + I E+E +E L+ + E ++
Sbjct: 820 MNENYKDLKQQIEDCKSKKVKHETIREKFVKQLVEIETEIETQEDLKKRYLYKITE--LE 877
Query: 824 DNISQANSIFFLNQNILQEY 843
D I +A+ I L+E+
Sbjct: 878 DRIKRADDILAEGNRKLEEF 897
>FB|FBgn0015615 [details] [associations]
symbol:Cap "Chromosome-associated protein" species:7227
"Drosophila melanogaster" [GO:0008278 "cohesin complex"
evidence=ISS;NAS] [GO:0007062 "sister chromatid cohesion"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0001737 "establishment of imaginal
disc-derived wing hair orientation" evidence=IMP]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0022008 GO:GO:0046331
GO:GO:0051276 GO:GO:0001737 GO:GO:0008278 eggNOG:COG1196
SUPFAM:SSF75553 HSSP:Q9X0R4 EMBL:U30492 PIR:S70553
ProteinModelPortal:Q24098 SMR:Q24098 STRING:Q24098 PaxDb:Q24098
PRIDE:Q24098 FlyBase:FBgn0015615 InParanoid:Q24098
OrthoDB:EOG4KKWHV ArrayExpress:Q24098 Bgee:Q24098 Uniprot:Q24098
Length = 1231
Score = 166 (63.5 bits), Expect = 9.4e-18, Sum P(3) = 9.4e-18
Identities = 91/391 (23%), Positives = 178/391 (45%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINI-VQIEKRKRREMENHI--NLRKRK------LESIEK 695
Q E + D+ +L +E +E +Q E RK + ++N + NL +R+ L+ I
Sbjct: 825 QREIDQLNDDIRRLNQENKEAFTQRMQFEVRKNK-LDNLLINNLFRRRDELIQALQEISV 883
Query: 696 ED---DINTALAKLVDQAADLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAK 751
ED +N +LV +A+ I++ +E I+ ++E V + ++ + K
Sbjct: 884 EDRKRKLNNCKTELV--SAEKRIKKVNSDLEEIEKRVMEAVQLQKELQQELETHVR---K 938
Query: 752 IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM 811
+E E NL + K + S ++++ C + ++ ++ + P + + +
Sbjct: 939 EKEAEENLNKDSKQLEKWSTKENMLNEKIDECTEKIASLG----AVPLVDPSYTR--MSL 992
Query: 812 PTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDL-STKQEADKKELKRFLAE 870
+ELE A Q ++ + N + N+ L ++ Q E L K+E D + K +
Sbjct: 993 KNIFKELEKANQ-HLKKYNHV---NKKALDQFLSFSEQKEKLYRRKEELDIGDQKIHML- 1047
Query: 871 IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSL---------DEHESDF---DKF 918
I +L+ + + ++ Q+ + F++ F+++ G L DE E + D F
Sbjct: 1048 IQSLEMQKVEAIQFTFRQVAQNFTKVFKKLVPMGAGFLILKTKDNEGDEMEKEVENSDAF 1107
Query: 919 -GILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPI 977
GI I+V F + E+ + SGG++S+ + + S+Q PF + DEI+Q +D +
Sbjct: 1108 TGIGIRVSFT-GVEAEMREMNQLSGGQKSLVALALIFSIQKCDPAPFYLFDEIDQALDAM 1166
Query: 978 NERKMFQQLVRAASQPNTPQCFLLT--PKLL 1006
+ RK ++ S +T Q T P+LL
Sbjct: 1167 H-RKAVANMIHELS--DTAQFITTTFRPELL 1194
Score = 149 (57.5 bits), Expect = 9.4e-18, Sum P(3) = 9.4e-18
Identities = 74/321 (23%), Positives = 136/321 (42%)
Query: 18 YMPGNIIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGD-TQLL 74
Y +I +I + F ++ D + +P R N+V+G NGSGKS+ AI L + T L
Sbjct: 29 YNKMHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLR 88
Query: 75 GRATSIGAYVKRGEE--SGYIKISL-RGDTK---EEHLTIMRKIDTRNKSEWFFNGKVVP 128
+ G S Y++I D + ++ +R++ K ++F N KVVP
Sbjct: 89 PEQRQSLLHEGTGARVISAYVEIIFDNSDNRVPIDKEEIFLRRVIGAKKDQYFLNKKVVP 148
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP---VKLLEETEKA-VGDPQLPVQHC 184
+ EV+ + + +N + Q ++ + A + +KLL E V D +
Sbjct: 149 RNEVVNLLESAGFSSSNPYYIVKQGKINQMATAADSYRLKLLREVAGTRVYDERKEESLN 208
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVE--QEKDVERVRQRAELLE---KVESMKK 239
L E SK++ I +K D L L+ E + + ++ R+ E + +++ KK
Sbjct: 209 LLRETDSKVEKISEYLKTIEDRLQTLEEEKEELKEYQKWDKTRRTLEYIRYETELKDTKK 268
Query: 240 KLPWLKYDMKKA---EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK 296
L L+ K + + I N L E K ++ K+E+++L
Sbjct: 269 ALDELQLQRKSSSDKKKIYNIEIQKAQEKIKDVQKN-LKEAKKKVQSTKEERSVL---MT 324
Query: 297 KLSSLINENSKRRMDFLEKVD 317
+ L+ E +K + ++ D
Sbjct: 325 EQQQLLREKTKLDLTIVDLND 345
Score = 95 (38.5 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 53/241 (21%), Positives = 109/241 (45%)
Query: 645 QTEQRLIEDEAAKLQKE----REEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDIN 700
+T+Q +D K+Q E +EE++ I Q K R + K LES+
Sbjct: 753 ETKQGKSKDVFEKVQGEIRLMKEELVRIEQYRAPKERSLAQC----KASLESMTSTKSSL 808
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF--- 757
A K + + L+ Q + EI L +I E ++F+ + +L+
Sbjct: 809 EAELKQ-ELMSTLSSQDQR---EIDQLNDDIRRLNQENKEAFTQRMQFEVRKNKLDNLLI 864
Query: 758 -NL-KQHEKL--ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPT 813
NL ++ ++L ALQ + ED K+++ +C+ L A+++ + + E+EK +E
Sbjct: 865 NNLFRRRDELIQALQ-EISVEDRKRKLNNCKTELVSAEKRIKKVNSDLEEIEKRVMEAVQ 923
Query: 814 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 873
+EL+ ++ ++ + +N+ ++ +Q+E STK+ +++ +I +
Sbjct: 924 LQKELQQELETHVRKEKEA---EENLNKD----SKQLEKWSTKENMLNEKIDECTEKIAS 976
Query: 874 L 874
L
Sbjct: 977 L 977
Score = 70 (29.7 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 48/268 (17%), Positives = 124/268 (46%)
Query: 657 KLQKEREEIIN-IVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNI 715
++QK+R E + I + EK K ++ N + + + SI E + K Q ++
Sbjct: 709 EMQKKRTEYTSQIAEFEK-KLSKLRNELKSTENNINSIVSE--MQKTETK---QGKSKDV 762
Query: 716 QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL---EFNLKQHEKLALQASLH 772
+ K EI+ + E+V + A K + + A + + + +L+ K L ++L
Sbjct: 763 FE-KVQGEIRLMKEELVRIEQYRAPKERSLAQCKASLESMTSTKSSLEAELKQELMSTLS 821
Query: 773 YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI 832
+D ++E++ + ++ + AF T ++ E + +L+ + +N+ +
Sbjct: 822 SQD-QREIDQLNDDIRRLNQENKE-AF-TQRMQFEVRK-----NKLDNLLINNLFRRRDE 873
Query: 833 FFLNQNILQEY--EHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQIN 890
LQE E R+R++ + T+ + +K +K+ ++++ ++++ + ++ L ++
Sbjct: 874 LI---QALQEISVEDRKRKLNNCKTELVSAEKRIKKVNSDLEEIEKRVMEAVQ-LQKELQ 929
Query: 891 ETFSRNFQEMAVAGEVSLDEHESDFDKF 918
+ + ++ A E +L++ +K+
Sbjct: 930 QELETHVRKEKEAEE-NLNKDSKQLEKW 956
Score = 62 (26.9 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 36/180 (20%), Positives = 76/180 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTA 702
+ TEQ+ + E KL ++ + VQ + + + + + K + EKE DD+
Sbjct: 322 LMTEQQQLLREKTKLDLTIVDLNDEVQGDNKSKERADQELKNLKVTIAEREKELDDVKPK 381
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI-RELEFNLKQ 761
+ + D + + +++K + + K + + + D I EL+ KQ
Sbjct: 382 YEAMKRKEEDCSRE-----LQLKEQKRKELYAKQGRGSQFSSREDRDKWITNELKSISKQ 436
Query: 762 -HEKLALQASLHYEDCKKEV---EHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
+K+A A L ED KK+ + + + + + E + E K++ E+ T ++
Sbjct: 437 TRDKIAHHAKL-VEDLKKDATSEKDLGQKIEEHSSELEQLRLQIDEHNKKYYELKKTKDQ 495
Score = 58 (25.5 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 27/115 (23%), Positives = 46/115 (40%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE-KVESMKKKLPWL 244
+V+ + +++ + +R L LK E+EK+++ V+ + E ++ K E ++L L
Sbjct: 340 IVDLNDEVQGDNKSKERADQELKNLKVTIAEREKELDDVKPKYEAMKRKEEDCSRELQ-L 398
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXX--XNTLHEFSKPIEGKKQEKAILDGDCKK 297
K +K Y N L SK K A L D KK
Sbjct: 399 KEQKRKELYAKQGRGSQFSSREDRDKWITNELKSISKQTRDKIAHHAKLVEDLKK 453
Score = 57 (25.1 bits), Expect = 6.0e-09, Sum P(4) = 6.0e-09
Identities = 24/100 (24%), Positives = 52/100 (52%)
Query: 161 LSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL-KT--IECTVKRNGDTLNQLKAL---- 213
+S +K E+ +KA+ C +E++++L K+ ++C V +GD ++ +L
Sbjct: 642 ISKLKYDEQHDKALRYIFGKTLICRNLERATELAKSTGLDC-VTLDGDQVSSKGSLTGGY 700
Query: 214 -NVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
N + + +E ++R E ++ +KKL L+ ++K E
Sbjct: 701 FNTSRSR-LEMQKKRTEYTSQIAEFEKKLSKLRNELKSTE 739
Score = 51 (23.0 bits), Expect = 8.2e-08, Sum P(3) = 8.2e-08
Identities = 26/120 (21%), Positives = 48/120 (40%)
Query: 201 KRNGDTLNQLKALNVEQEKDVERVR-QRAELLEKVESMKKKLPWLKYDMK--KAEYIXXX 257
K+ D L QL+ + +K + + Q+A+ EK++ ++K L K ++ K E
Sbjct: 267 KKALDEL-QLQRKSSSDKKKIYNIEIQKAQ--EKIKDVQKNLKEAKKKVQSTKEERSVLM 323
Query: 258 XXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVD 317
T+ + + ++G + K D + K L I E K D K +
Sbjct: 324 TEQQQLLREKTKLDLTIVDLNDEVQGDNKSKERADQELKNLKVTIAEREKELDDVKPKYE 383
Score = 50 (22.7 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 32/192 (16%), Positives = 78/192 (40%)
Query: 682 HINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK 741
+ N + +LE +K + + +A+ + + L + I +++ E+ + +
Sbjct: 700 YFNTSRSRLEMQKKRTEYTSQIAEFEKKLSKLRNELKSTENNINSIVSEMQKTETKQGKS 759
Query: 742 HMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLS--DAKRQAESIAF 799
+ +IR ++ L + E+ CK +E S +A+ + E ++
Sbjct: 760 KDVFEKVQGEIRLMKEELVRIEQYRAPKERSLAQCKASLESMTSTKSSLEAELKQELMST 819
Query: 800 ITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHR---QRQIEDLSTK 856
++ + ++E ++ I L ++ +Q F + +N L +R+ E +
Sbjct: 820 LSSQDQREIDQLNDDIRRLNQENKEAFTQRMQ-FEVRKNKLDNLLINNLFRRRDELIQAL 878
Query: 857 QEADKKELKRFL 868
QE ++ KR L
Sbjct: 879 QEISVEDRKRKL 890
Score = 49 (22.3 bits), Expect = 6.0e-09, Sum P(4) = 6.0e-09
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 3 LPRVKRLKVSRGEDDYMPGNIIEIELHNF 31
L + +LK+ GE +MP N +++++H++
Sbjct: 605 LKEMNKLKLP-GEVTFMPLNRLQVKIHDY 632
Score = 46 (21.3 bits), Expect = 9.4e-18, Sum P(3) = 9.4e-18
Identities = 19/87 (21%), Positives = 39/87 (44%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME-DKNNKLLHAL 427
D EK+ +I + + + ++ KE+ L Q K +L + +E + +L+ L
Sbjct: 761 DVFEKVQGEIRLMKEELVRIEQYRAPKERSLAQCKASLESMTSTKSSLEAELKQELMSTL 820
Query: 428 RNSGAENIFEAYCWLQQHRHELNKEAY 454
+ I + +++ E NKEA+
Sbjct: 821 SSQDQREIDQLNDDIRRLNQE-NKEAF 846
Score = 45 (20.9 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 373 KLGSQILELG--VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 419
KL I++L VQ + K +++++E L K+T+ + L D++ K
Sbjct: 335 KLDLTIVDLNDEVQGDNKSKERADQE--LKNLKVTIAEREKELDDVKPK 381
Score = 45 (20.9 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 30/152 (19%), Positives = 63/152 (41%)
Query: 658 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDD-INTALAKLVDQAADLNIQ 716
++++ E+ +Q++++KR+E+ R + S E D I L + Q D
Sbjct: 385 MKRKEEDCSRELQLKEQKRKELYAKQG-RGSQFSSREDRDKWITNELKSISKQTRDKIAH 443
Query: 717 QFKYAIEIKNLLVEIVSCK--WSYAEKHMASIE--------FDAKIRELEFNLKQHEKLA 766
K ++K + S K E+H + +E + K EL+ QH+ +
Sbjct: 444 HAKLVEDLKK---DATSEKDLGQKIEEHSSELEQLRLQIDEHNKKYYELKKTKDQHQSMR 500
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIA 798
+ ++++ ++ LS A + S+A
Sbjct: 501 NELWRKETQMTQQLQTHKEELSRADQALRSMA 532
Score = 44 (20.5 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 18/63 (28%), Positives = 26/63 (41%)
Query: 372 EK-LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNS 430
EK LG +I E + Q RLQ E K + K T Q ++ K ++ L+
Sbjct: 458 EKDLGQKIEEHSSELEQLRLQIDEHNKKYYELKKTKDQHQSMRNELWRKETQMTQQLQTH 517
Query: 431 GAE 433
E
Sbjct: 518 KEE 520
Score = 41 (19.5 bits), Expect = 3.1e-17, Sum P(3) = 3.1e-17
Identities = 18/73 (24%), Positives = 41/73 (56%)
Query: 370 KIEKLGSQILELGVQANQ--KRLQKSEKEKILNQ---NKLTLR--QCSDRLKDMEDKNNK 422
KIE+ S++ +L +Q ++ K+ + +K K +Q N+L + Q + +L+ +++ ++
Sbjct: 464 KIEEHSSELEQLRLQIDEHNKKYYELKKTKDQHQSMRNELWRKETQMTQQLQTHKEELSR 523
Query: 423 LLHALRNSGAENI 435
ALR+ + I
Sbjct: 524 ADQALRSMAGKPI 536
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 391 QKSEKEKILNQNKLTLRQCSDRLKDMEDK 419
+K E +L + + + S+ LK +ED+
Sbjct: 202 RKEESLNLLRETDSKVEKISEYLKTIEDR 230
>UNIPROTKB|Q81ZL2 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K03529 TIGRFAMs:TIGR02168 EMBL:AJ543641 RefSeq:NP_819572.1
HSSP:Q9X0R4 ProteinModelPortal:Q81ZL2 PRIDE:Q81ZL2 GeneID:1208425
KEGG:cbu:CBU_0540 PATRIC:17929777 HOGENOM:HOG000036391 OMA:WARISKL
ProtClustDB:CLSK914134 BioCyc:CBUR227377:GJ7S-543-MONOMER
Uniprot:Q81ZL2
Length = 1169
Score = 182 (69.1 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 79/351 (22%), Positives = 162/351 (46%)
Query: 649 RLIE--DEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALA 704
+LIE ++A + +KE +E+ I + E + + + +R+L+ + E+ + ++ L+
Sbjct: 788 QLIELREKAHQKRKEADELEIRLASNEDQLSL-LRQTVARDQRQLKQLTERREMLSQYLS 846
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 764
+ +LN ++ + +E + L++E + EK + E + +R LE +K
Sbjct: 847 EGDKPLEELN-EKLQTQLE-QRLILET---ELREVEKELE--EANQLLRHLEEKRVSTQK 899
Query: 765 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP--TTIEELEAAI 822
+A E+ + + + + K Q F +LE+ E+P TIE + +
Sbjct: 900 ALNEAQAQLEELRMQRQTVSVRQTTIKEQLSENDF---DLEQVMAELPEEATIESWQEKL 956
Query: 823 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE-IDALKEKWLPT 881
+ + + +N ++EYE + L KQ AD E L I + +
Sbjct: 957 DQLVERIQRMGPINLAAIEEYESVNERKNYLD-KQHADLTEALEILKNAIHKIDRETRAK 1015
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQS 941
+ Q+N+ F F + G +L+ ++D G++++ + G+ V + H S
Sbjct: 1016 FQETYDQVNQQFQSLFPRIFGGGRATLEMTDTDLLTAGVIVRAQ--PPGKRNV-TIHMLS 1072
Query: 942 GGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 992
GGE++++ + + SL L PF ++DE++ +D IN + F QLV+ S+
Sbjct: 1073 GGEKALTAVALVFSLFQLNPAPFCILDEVDAPLDDINVGR-FCQLVKEMSK 1122
Score = 120 (47.3 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 56/246 (22%), Positives = 102/246 (41%)
Query: 26 IELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYV 84
I+L F +F D + +N ++GPNG GKS++V A+ +G + R S+ +
Sbjct: 6 IKLAGFKSFVDPTLIPIRGSMNAIVGPNGCGKSNVVDAVRWVIGETSAKQLRGQSMSDVI 65
Query: 85 KRGEES----GYIKISLRGDTKE-----EH-----LTIMRKIDTRNKSEWFFNGKVVPKG 130
G S G I L D E E+ + I R+++ +S +F NG V +
Sbjct: 66 FNGTTSRKPVGKASIELHFDNSEGRIGGEYAKYGEIAIRREVERDGQSNYFINGAHVRRR 125
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
+V+++ + + + Q + + P +L E+A G + + E
Sbjct: 126 DVVDVFLGTGLGPRSYA-IVEQGMISNLIEAKPEELRVYIEEAAGISKYKERRR---ETE 181
Query: 191 SKLKTIECTVKRNGDTLNQL-KALN--VEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
S+++ + + R D +L K L Q ER + + + + K L W D
Sbjct: 182 SRMRHTQENLDRVNDIAEELAKQLRHLKRQANAAERYKAYKQEERALGAQFKVLQWKALD 241
Query: 248 MKKAEY 253
K +E+
Sbjct: 242 HKLSEH 247
Score = 107 (42.7 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 55/248 (22%), Positives = 110/248 (44%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQ----IEKRKRREMENHINLRKRKLESIEKEDDIN 700
Q+EQ IE E ++K RE++ ++ + ++KR + L +R ++ EK
Sbjct: 262 QSEQHRIETE---IEKMREQLTDVNEKHNAVQKRYYGLGADIARLEQRIKDTQEKIHQWQ 318
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
+ L + + +L + +I L E+ K ++ H A+ E ++ + E N+
Sbjct: 319 SELEENENVWEELQNNTAECEAQITELETELEHLKPRSSDIHSAAAEASKELAQAESNMA 378
Query: 761 QHEKL--ALQASLHYEDCKKEV-----EHCRKHLSDAKRQAESIAFITPELE-----KEF 808
+ ++ A QA + EV EHC + L+D ++ + + +L+ E
Sbjct: 379 RWQEAWEAFQAETSQTMSQLEVMRTKREHCERQLTDLEKSKQQLQQNLKQLQLDQLLNEI 438
Query: 809 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 868
+ + E L A + D+ S+ S L + I + Q E+L T Q + + L+
Sbjct: 439 APLSSQSELLNAELSDSQSKLQS---LAETIASRRDANQTTREELQT-QRRELQALEARA 494
Query: 869 AEIDALKE 876
A ++AL++
Sbjct: 495 ASLEALQK 502
Score = 92 (37.4 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 48/234 (20%), Positives = 99/234 (42%)
Query: 675 KRREMENHINLRKRKLESIEKEDD-INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVS 733
K E + IN + + E + E I T + K+ +Q D+N + L +I
Sbjct: 243 KLSEHDQAINQKNTRREEKQSEQHRIETEIEKMREQLTDVNEKHNAVQKRYYGLGADIAR 302
Query: 734 CKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQ 793
E+ + + KI + + L+++E + + + +C+ ++ L K +
Sbjct: 303 L-----EQRIKDTQ--EKIHQWQSELEENENVWEELQNNTAECEAQITELETELEHLKPR 355
Query: 794 AESIAFITPELEKEFLEMPTTI---EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQI 850
+ I E KE + + + +E A Q SQ S + + + EH +RQ+
Sbjct: 356 SSDIHSAAAEASKELAQAESNMARWQEAWEAFQAETSQTMSQLEVMRT---KREHCERQL 412
Query: 851 EDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN---LVAQINETFSRNFQEMA 901
DL ++ ++ LK+ ++D L + P L A+++++ S+ Q +A
Sbjct: 413 TDLEKSKQQLQQNLKQL--QLDQLLNEIAPLSSQSELLNAELSDSQSK-LQSLA 463
Score = 89 (36.4 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 48/257 (18%), Positives = 107/257 (41%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
++D L REE+I + + E+ + ++++ + +E N L+ Q
Sbjct: 764 LDDSQGLLATRREEMIRERDHYRTQLIELREKAHQKRKEADELEIRLASNEDQLSLLRQT 823
Query: 711 ADLNIQQFKYAIEIKNLLVEIVS--CK--WSYAEKHMASIE----FDAKIRELEFNLKQH 762
+ +Q K E + +L + +S K EK +E + ++RE+E L++
Sbjct: 824 VARDQRQLKQLTERREMLSQYLSEGDKPLEELNEKLQTQLEQRLILETELREVEKELEEA 883
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
+L +K + + L + + Q ++++ ++++ E +E++ A +
Sbjct: 884 NQLLRHLEEKRVSTQKALNEAQAQLEELRMQRQTVSVRQTTIKEQLSENDFDLEQVMAEL 943
Query: 823 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL 882
+ + + L+Q L E R I + ++ E K +L + A + L L
Sbjct: 944 PEEATIESWQEKLDQ--LVERIQRMGPINLAAIEEYESVNERKNYLDKQHADLTEALEIL 1001
Query: 883 RNLVAQINETFSRNFQE 899
+N + +I+ FQE
Sbjct: 1002 KNAIHKIDRETRAKFQE 1018
Score = 85 (35.0 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 56/303 (18%), Positives = 134/303 (44%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E + +L+ +R+ ++ Q + +++ ++ ++ +L++ +++ T L K+
Sbjct: 688 EQQLNQLETDRDTLLQTYQKLNAEATTVQSALSTKQAQLDNAQQQQ---TRL-KIGLNEC 743
Query: 712 DLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASI-EFDA-KIRELEFNLKQHEKL--A 766
+ I+Q + + IKN + + A + I E D + + +E K H+K A
Sbjct: 744 EQQIEQCQQQLTLIKNKASSLDDSQGLLATRREEMIRERDHYRTQLIELREKAHQKRKEA 803
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 826
+ + + ++ R+ ++ +RQ + + L + E +EEL +Q +
Sbjct: 804 DELEIRLASNEDQLSLLRQTVARDQRQLKQLTERREMLSQYLSEGDKPLEELNEKLQTQL 863
Query: 827 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK-EKWLPTLRNL 885
Q + + + +E E + + L K+ + +K L A+++ L+ ++ ++R
Sbjct: 864 EQRLILETELREVEKELEEANQLLRHLEEKRVSTQKALNEAQAQLEELRMQRQTVSVRQT 923
Query: 886 VAQINETFSRN-FQEMAVAGEVSLDEH-ESDFDKFGILIKVKFRQSGQLEVLSAH-HQSG 942
I E S N F V E+ + ES +K L++ + ++ G + + + ++S
Sbjct: 924 T--IKEQLSENDFDLEQVMAELPEEATIESWQEKLDQLVE-RIQRMGPINLAAIEEYESV 980
Query: 943 GER 945
ER
Sbjct: 981 NER 983
Score = 78 (32.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 43/216 (19%), Positives = 88/216 (40%)
Query: 679 MENHINLRKRKLESIEKEDDINTAL-AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWS 737
+E I + K+ + E + N + +L + A+ Q + E+++L +
Sbjct: 303 LEQRIKDTQEKIHQWQSELEENENVWEELQNNTAECEAQITELETELEHLKPRSSDIHSA 362
Query: 738 YAE--KHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAE 795
AE K +A E + + + Q E + L K+E HC + L+D ++ +
Sbjct: 363 AAEASKELAQAESNMARWQEAWEAFQAETSQTMSQLEVMRTKRE--HCERQLTDLEKSKQ 420
Query: 796 SIAFITPELE-----KEFLEMPTTIEELEAAIQDNISQANSIFFL-------NQNILQEY 843
+ +L+ E + + E L A + D+ S+ S+ NQ +E
Sbjct: 421 QLQQNLKQLQLDQLLNEIAPLSSQSELLNAELSDSQSKLQSLAETIASRRDANQTTREEL 480
Query: 844 EHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 879
+ ++R+++ L + + + K L E D +WL
Sbjct: 481 QTQRRELQALEARAASLEALQKAALGESDGKISEWL 516
Score = 67 (28.6 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 645 QTEQRLI-EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTA 702
Q EQRLI E E +++KE EE +++ + KR + +N + +LE + + ++
Sbjct: 862 QLEQRLILETELREVEKELEEANQLLRHLEEKRVSTQKALNEAQAQLEELRMQRQTVSVR 921
Query: 703 LAKLVDQAA--DLNIQQ 717
+ +Q + D +++Q
Sbjct: 922 QTTIKEQLSENDFDLEQ 938
Score = 54 (24.1 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 11/48 (22%), Positives = 26/48 (54%)
Query: 386 NQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
NQK ++ EK+ ++ + + + ++L D+ +K+N + GA+
Sbjct: 252 NQKNTRREEKQSEQHRIETEIEKMREQLTDVNEKHNAVQKRYYGLGAD 299
Score = 52 (23.4 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 376 SQILELGVQANQKRLQKSEKEKIL--NQNKLTL-RQCSDR----LKDMEDKNNKL 423
+Q++EL +A+QKR + E E L N+++L+L RQ R LK + ++ L
Sbjct: 787 TQLIELREKAHQKRKEADELEIRLASNEDQLSLLRQTVARDQRQLKQLTERREML 841
Score = 49 (22.3 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 19/85 (22%), Positives = 37/85 (43%)
Query: 169 ETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRA 228
ETE P+ H A E S +L E + R + +A + +E +R +
Sbjct: 346 ETELEHLKPRSSDIHSAAAEASKELAQAESNMARWQEAWEAFQAETSQTMSQLEVMRTKR 405
Query: 229 ELLEK-VESMKKKLPWLKYDMKKAE 252
E E+ + ++K L+ ++K+ +
Sbjct: 406 EHCERQLTDLEKSKQQLQQNLKQLQ 430
Score = 46 (21.3 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 19/99 (19%), Positives = 46/99 (46%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 431
+KL ++ + + K+ Q ++ + K+ L +C +++ + + L ++N
Sbjct: 706 QKLNAEATTVQSALSTKQAQLDNAQQQQTRLKIGLNECEQQIEQCQQQ----LTLIKNK- 760
Query: 432 AENIFEAYCWLQQHRHELNKEA--YGPVLLEVNVSNRAH 468
A ++ ++ L R E+ +E Y L+E+ +AH
Sbjct: 761 ASSLDDSQGLLATRREEMIRERDHYRTQLIELR--EKAH 797
Score = 45 (20.9 bits), Expect = 5.9e-09, Sum P(3) = 5.9e-09
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE-QEKDVERVRQRAELLEKVE 235
Q + + L + SKL+++ T+ D NQ ++ Q ++++ + RA LE ++
Sbjct: 444 QSELLNAELSDSQSKLQSLAETIASRRDA-NQTTREELQTQRRELQALEARAASLEALQ 501
Score = 44 (20.5 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 359 QTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQ--NKLT-LRQCSDRLK- 414
QT+ E K E Q+ +L + ++++LQ++ K+ L+Q N++ L S+ L
Sbjct: 393 QTMSQLEVMRTKREHCERQLTDL--EKSKQQLQQNLKQLQLDQLLNEIAPLSSQSELLNA 450
Query: 415 DMEDKNNKL 423
++ D +KL
Sbjct: 451 ELSDSQSKL 459
Score = 41 (19.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 29/104 (27%), Positives = 45/104 (43%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEK--EKILN-QNKLTLRQCSD-RLKDMEDKNNKL 423
+D E+L Q+ L QAN K+ K E+ L Q K+ + D +L + + N+
Sbjct: 195 NDIAEELAKQLRHLKRQANAAERYKAYKQEERALGAQFKVLQWKALDHKLSEHDQAINQ- 253
Query: 424 LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRA 467
+N+ E E +QHR E E L +VN + A
Sbjct: 254 ----KNTRRE---EKQS--EQHRIETEIEKMREQLTDVNEKHNA 288
Score = 40 (19.1 bits), Expect = 5.9e-16, Sum P(3) = 5.9e-16
Identities = 14/64 (21%), Positives = 28/64 (43%)
Query: 392 KSEKEKILNQNKL--TLRQ-CSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHE 448
++E + ++Q ++ T R+ C +L D+E +L L+ + + L
Sbjct: 388 QAETSQTMSQLEVMRTKREHCERQLTDLEKSKQQLQQNLKQLQLDQLLNEIAPLSSQSEL 447
Query: 449 LNKE 452
LN E
Sbjct: 448 LNAE 451
>TIGR_CMR|CBU_0540 [details] [associations]
symbol:CBU_0540 "SMC family protein" species:227377
"Coxiella burnetii RSA 493" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR024704
HAMAP:MF_01894 InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K03529 TIGRFAMs:TIGR02168 EMBL:AJ543641 RefSeq:NP_819572.1
HSSP:Q9X0R4 ProteinModelPortal:Q81ZL2 PRIDE:Q81ZL2 GeneID:1208425
KEGG:cbu:CBU_0540 PATRIC:17929777 HOGENOM:HOG000036391 OMA:WARISKL
ProtClustDB:CLSK914134 BioCyc:CBUR227377:GJ7S-543-MONOMER
Uniprot:Q81ZL2
Length = 1169
Score = 182 (69.1 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 79/351 (22%), Positives = 162/351 (46%)
Query: 649 RLIE--DEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALA 704
+LIE ++A + +KE +E+ I + E + + + +R+L+ + E+ + ++ L+
Sbjct: 788 QLIELREKAHQKRKEADELEIRLASNEDQLSL-LRQTVARDQRQLKQLTERREMLSQYLS 846
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 764
+ +LN ++ + +E + L++E + EK + E + +R LE +K
Sbjct: 847 EGDKPLEELN-EKLQTQLE-QRLILET---ELREVEKELE--EANQLLRHLEEKRVSTQK 899
Query: 765 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP--TTIEELEAAI 822
+A E+ + + + + K Q F +LE+ E+P TIE + +
Sbjct: 900 ALNEAQAQLEELRMQRQTVSVRQTTIKEQLSENDF---DLEQVMAELPEEATIESWQEKL 956
Query: 823 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE-IDALKEKWLPT 881
+ + + +N ++EYE + L KQ AD E L I + +
Sbjct: 957 DQLVERIQRMGPINLAAIEEYESVNERKNYLD-KQHADLTEALEILKNAIHKIDRETRAK 1015
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQS 941
+ Q+N+ F F + G +L+ ++D G++++ + G+ V + H S
Sbjct: 1016 FQETYDQVNQQFQSLFPRIFGGGRATLEMTDTDLLTAGVIVRAQ--PPGKRNV-TIHMLS 1072
Query: 942 GGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 992
GGE++++ + + SL L PF ++DE++ +D IN + F QLV+ S+
Sbjct: 1073 GGEKALTAVALVFSLFQLNPAPFCILDEVDAPLDDINVGR-FCQLVKEMSK 1122
Score = 120 (47.3 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 56/246 (22%), Positives = 102/246 (41%)
Query: 26 IELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYV 84
I+L F +F D + +N ++GPNG GKS++V A+ +G + R S+ +
Sbjct: 6 IKLAGFKSFVDPTLIPIRGSMNAIVGPNGCGKSNVVDAVRWVIGETSAKQLRGQSMSDVI 65
Query: 85 KRGEES----GYIKISLRGDTKE-----EH-----LTIMRKIDTRNKSEWFFNGKVVPKG 130
G S G I L D E E+ + I R+++ +S +F NG V +
Sbjct: 66 FNGTTSRKPVGKASIELHFDNSEGRIGGEYAKYGEIAIRREVERDGQSNYFINGAHVRRR 125
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
+V+++ + + + Q + + P +L E+A G + + E
Sbjct: 126 DVVDVFLGTGLGPRSYA-IVEQGMISNLIEAKPEELRVYIEEAAGISKYKERRR---ETE 181
Query: 191 SKLKTIECTVKRNGDTLNQL-KALN--VEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
S+++ + + R D +L K L Q ER + + + + K L W D
Sbjct: 182 SRMRHTQENLDRVNDIAEELAKQLRHLKRQANAAERYKAYKQEERALGAQFKVLQWKALD 241
Query: 248 MKKAEY 253
K +E+
Sbjct: 242 HKLSEH 247
Score = 107 (42.7 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 55/248 (22%), Positives = 110/248 (44%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQ----IEKRKRREMENHINLRKRKLESIEKEDDIN 700
Q+EQ IE E ++K RE++ ++ + ++KR + L +R ++ EK
Sbjct: 262 QSEQHRIETE---IEKMREQLTDVNEKHNAVQKRYYGLGADIARLEQRIKDTQEKIHQWQ 318
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
+ L + + +L + +I L E+ K ++ H A+ E ++ + E N+
Sbjct: 319 SELEENENVWEELQNNTAECEAQITELETELEHLKPRSSDIHSAAAEASKELAQAESNMA 378
Query: 761 QHEKL--ALQASLHYEDCKKEV-----EHCRKHLSDAKRQAESIAFITPELE-----KEF 808
+ ++ A QA + EV EHC + L+D ++ + + +L+ E
Sbjct: 379 RWQEAWEAFQAETSQTMSQLEVMRTKREHCERQLTDLEKSKQQLQQNLKQLQLDQLLNEI 438
Query: 809 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 868
+ + E L A + D+ S+ S L + I + Q E+L T Q + + L+
Sbjct: 439 APLSSQSELLNAELSDSQSKLQS---LAETIASRRDANQTTREELQT-QRRELQALEARA 494
Query: 869 AEIDALKE 876
A ++AL++
Sbjct: 495 ASLEALQK 502
Score = 92 (37.4 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 48/234 (20%), Positives = 99/234 (42%)
Query: 675 KRREMENHINLRKRKLESIEKEDD-INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVS 733
K E + IN + + E + E I T + K+ +Q D+N + L +I
Sbjct: 243 KLSEHDQAINQKNTRREEKQSEQHRIETEIEKMREQLTDVNEKHNAVQKRYYGLGADIAR 302
Query: 734 CKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQ 793
E+ + + KI + + L+++E + + + +C+ ++ L K +
Sbjct: 303 L-----EQRIKDTQ--EKIHQWQSELEENENVWEELQNNTAECEAQITELETELEHLKPR 355
Query: 794 AESIAFITPELEKEFLEMPTTI---EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQI 850
+ I E KE + + + +E A Q SQ S + + + EH +RQ+
Sbjct: 356 SSDIHSAAAEASKELAQAESNMARWQEAWEAFQAETSQTMSQLEVMRT---KREHCERQL 412
Query: 851 EDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN---LVAQINETFSRNFQEMA 901
DL ++ ++ LK+ ++D L + P L A+++++ S+ Q +A
Sbjct: 413 TDLEKSKQQLQQNLKQL--QLDQLLNEIAPLSSQSELLNAELSDSQSK-LQSLA 463
Score = 89 (36.4 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 48/257 (18%), Positives = 107/257 (41%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
++D L REE+I + + E+ + ++++ + +E N L+ Q
Sbjct: 764 LDDSQGLLATRREEMIRERDHYRTQLIELREKAHQKRKEADELEIRLASNEDQLSLLRQT 823
Query: 711 ADLNIQQFKYAIEIKNLLVEIVS--CK--WSYAEKHMASIE----FDAKIRELEFNLKQH 762
+ +Q K E + +L + +S K EK +E + ++RE+E L++
Sbjct: 824 VARDQRQLKQLTERREMLSQYLSEGDKPLEELNEKLQTQLEQRLILETELREVEKELEEA 883
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
+L +K + + L + + Q ++++ ++++ E +E++ A +
Sbjct: 884 NQLLRHLEEKRVSTQKALNEAQAQLEELRMQRQTVSVRQTTIKEQLSENDFDLEQVMAEL 943
Query: 823 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL 882
+ + + L+Q L E R I + ++ E K +L + A + L L
Sbjct: 944 PEEATIESWQEKLDQ--LVERIQRMGPINLAAIEEYESVNERKNYLDKQHADLTEALEIL 1001
Query: 883 RNLVAQINETFSRNFQE 899
+N + +I+ FQE
Sbjct: 1002 KNAIHKIDRETRAKFQE 1018
Score = 85 (35.0 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 56/303 (18%), Positives = 134/303 (44%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E + +L+ +R+ ++ Q + +++ ++ ++ +L++ +++ T L K+
Sbjct: 688 EQQLNQLETDRDTLLQTYQKLNAEATTVQSALSTKQAQLDNAQQQQ---TRL-KIGLNEC 743
Query: 712 DLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASI-EFDA-KIRELEFNLKQHEKL--A 766
+ I+Q + + IKN + + A + I E D + + +E K H+K A
Sbjct: 744 EQQIEQCQQQLTLIKNKASSLDDSQGLLATRREEMIRERDHYRTQLIELREKAHQKRKEA 803
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 826
+ + + ++ R+ ++ +RQ + + L + E +EEL +Q +
Sbjct: 804 DELEIRLASNEDQLSLLRQTVARDQRQLKQLTERREMLSQYLSEGDKPLEELNEKLQTQL 863
Query: 827 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK-EKWLPTLRNL 885
Q + + + +E E + + L K+ + +K L A+++ L+ ++ ++R
Sbjct: 864 EQRLILETELREVEKELEEANQLLRHLEEKRVSTQKALNEAQAQLEELRMQRQTVSVRQT 923
Query: 886 VAQINETFSRN-FQEMAVAGEVSLDEH-ESDFDKFGILIKVKFRQSGQLEVLSAH-HQSG 942
I E S N F V E+ + ES +K L++ + ++ G + + + ++S
Sbjct: 924 T--IKEQLSENDFDLEQVMAELPEEATIESWQEKLDQLVE-RIQRMGPINLAAIEEYESV 980
Query: 943 GER 945
ER
Sbjct: 981 NER 983
Score = 78 (32.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 43/216 (19%), Positives = 88/216 (40%)
Query: 679 MENHINLRKRKLESIEKEDDINTAL-AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWS 737
+E I + K+ + E + N + +L + A+ Q + E+++L +
Sbjct: 303 LEQRIKDTQEKIHQWQSELEENENVWEELQNNTAECEAQITELETELEHLKPRSSDIHSA 362
Query: 738 YAE--KHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAE 795
AE K +A E + + + Q E + L K+E HC + L+D ++ +
Sbjct: 363 AAEASKELAQAESNMARWQEAWEAFQAETSQTMSQLEVMRTKRE--HCERQLTDLEKSKQ 420
Query: 796 SIAFITPELE-----KEFLEMPTTIEELEAAIQDNISQANSIFFL-------NQNILQEY 843
+ +L+ E + + E L A + D+ S+ S+ NQ +E
Sbjct: 421 QLQQNLKQLQLDQLLNEIAPLSSQSELLNAELSDSQSKLQSLAETIASRRDANQTTREEL 480
Query: 844 EHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 879
+ ++R+++ L + + + K L E D +WL
Sbjct: 481 QTQRRELQALEARAASLEALQKAALGESDGKISEWL 516
Score = 67 (28.6 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 645 QTEQRLI-EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTA 702
Q EQRLI E E +++KE EE +++ + KR + +N + +LE + + ++
Sbjct: 862 QLEQRLILETELREVEKELEEANQLLRHLEEKRVSTQKALNEAQAQLEELRMQRQTVSVR 921
Query: 703 LAKLVDQAA--DLNIQQ 717
+ +Q + D +++Q
Sbjct: 922 QTTIKEQLSENDFDLEQ 938
Score = 54 (24.1 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 11/48 (22%), Positives = 26/48 (54%)
Query: 386 NQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
NQK ++ EK+ ++ + + + ++L D+ +K+N + GA+
Sbjct: 252 NQKNTRREEKQSEQHRIETEIEKMREQLTDVNEKHNAVQKRYYGLGAD 299
Score = 52 (23.4 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 376 SQILELGVQANQKRLQKSEKEKIL--NQNKLTL-RQCSDR----LKDMEDKNNKL 423
+Q++EL +A+QKR + E E L N+++L+L RQ R LK + ++ L
Sbjct: 787 TQLIELREKAHQKRKEADELEIRLASNEDQLSLLRQTVARDQRQLKQLTERREML 841
Score = 49 (22.3 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 19/85 (22%), Positives = 37/85 (43%)
Query: 169 ETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRA 228
ETE P+ H A E S +L E + R + +A + +E +R +
Sbjct: 346 ETELEHLKPRSSDIHSAAAEASKELAQAESNMARWQEAWEAFQAETSQTMSQLEVMRTKR 405
Query: 229 ELLEK-VESMKKKLPWLKYDMKKAE 252
E E+ + ++K L+ ++K+ +
Sbjct: 406 EHCERQLTDLEKSKQQLQQNLKQLQ 430
Score = 46 (21.3 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 19/99 (19%), Positives = 46/99 (46%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 431
+KL ++ + + K+ Q ++ + K+ L +C +++ + + L ++N
Sbjct: 706 QKLNAEATTVQSALSTKQAQLDNAQQQQTRLKIGLNECEQQIEQCQQQ----LTLIKNK- 760
Query: 432 AENIFEAYCWLQQHRHELNKEA--YGPVLLEVNVSNRAH 468
A ++ ++ L R E+ +E Y L+E+ +AH
Sbjct: 761 ASSLDDSQGLLATRREEMIRERDHYRTQLIELR--EKAH 797
Score = 45 (20.9 bits), Expect = 5.9e-09, Sum P(3) = 5.9e-09
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE-QEKDVERVRQRAELLEKVE 235
Q + + L + SKL+++ T+ D NQ ++ Q ++++ + RA LE ++
Sbjct: 444 QSELLNAELSDSQSKLQSLAETIASRRDA-NQTTREELQTQRRELQALEARAASLEALQ 501
Score = 44 (20.5 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 359 QTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQ--NKLT-LRQCSDRLK- 414
QT+ E K E Q+ +L + ++++LQ++ K+ L+Q N++ L S+ L
Sbjct: 393 QTMSQLEVMRTKREHCERQLTDL--EKSKQQLQQNLKQLQLDQLLNEIAPLSSQSELLNA 450
Query: 415 DMEDKNNKL 423
++ D +KL
Sbjct: 451 ELSDSQSKL 459
Score = 41 (19.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 29/104 (27%), Positives = 45/104 (43%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEK--EKILN-QNKLTLRQCSD-RLKDMEDKNNKL 423
+D E+L Q+ L QAN K+ K E+ L Q K+ + D +L + + N+
Sbjct: 195 NDIAEELAKQLRHLKRQANAAERYKAYKQEERALGAQFKVLQWKALDHKLSEHDQAINQ- 253
Query: 424 LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRA 467
+N+ E E +QHR E E L +VN + A
Sbjct: 254 ----KNTRRE---EKQS--EQHRIETEIEKMREQLTDVNEKHNA 288
Score = 40 (19.1 bits), Expect = 5.9e-16, Sum P(3) = 5.9e-16
Identities = 14/64 (21%), Positives = 28/64 (43%)
Query: 392 KSEKEKILNQNKL--TLRQ-CSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHE 448
++E + ++Q ++ T R+ C +L D+E +L L+ + + L
Sbjct: 388 QAETSQTMSQLEVMRTKREHCERQLTDLEKSKQQLQQNLKQLQLDQLLNEIAPLSSQSEL 447
Query: 449 LNKE 452
LN E
Sbjct: 448 LNAE 451
>UNIPROTKB|F1SRP0 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000796
"condensin complex" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005694 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:CU861938 Ensembl:ENSSSCT00000005946 Uniprot:F1SRP0
Length = 1191
Score = 167 (63.8 bits), Expect = 3.5e-17, Sum P(4) = 3.5e-17
Identities = 77/344 (22%), Positives = 147/344 (42%)
Query: 653 DEAAKLQKE--REEIINI-VQIE--KRKRREMENHINLRKRKLESIEKEDDINTALAKLV 707
D ++K K R+E+ I +++E KR+ E + ++S E + I A++
Sbjct: 805 DASSKKMKRNSRKEVEAITLELEELKREHASCEQQLEAVNEAIKSYEGQ--IAVVAAEVA 862
Query: 708 DQAADLNIQQFKYAIEIKNLLVE--IVSCKWSYAEKHMA-SIEFDAKIRELEFNLKQHEK 764
+N Q + + + + + IV K++ KH + E+ KI+EL+ N+ +H++
Sbjct: 863 KNKESVNKAQEEVTKQKEVITAQDNIVKAKYAEVAKHKEQNNEYQLKIKELDHNINKHKR 922
Query: 765 LALQASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
A A+ K+ + + KHL A P KE + +EE++ +
Sbjct: 923 EAEDAAAKVSKMLKDYDWINTDKHLFGQPNTAYDFKTTNP---KEASQRLQKLEEMKEKL 979
Query: 823 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL 882
N++ N+L E E R DL K+ + + + LA I+ L +K L
Sbjct: 980 GRNVNMRA------MNVLTEAEERYN---DLMKKKRIVENDKSKILATIEDLDQKKNQAL 1030
Query: 883 RNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSG 942
++N+ F F + L E G+ KV + + E L+ SG
Sbjct: 1031 NIAWQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELSG 1087
Query: 943 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
G+RS+ + ++S+ P ++DE++ +D + + + Q L
Sbjct: 1088 GQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 122 (48.0 bits), Expect = 3.5e-17, Sum P(4) = 3.5e-17
Identities = 43/184 (23%), Positives = 84/184 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSD 87
Query: 101 TKE--------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K+ + +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEVHDEITVTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA----LVEKSSKLKTIECTVKRN-GDTL 207
R+ + + P ++L E+A G + A + +K +KLK I+ ++ T+
Sbjct: 148 GRITKVLNMKPPEILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTI 207
Query: 208 NQLK 211
+LK
Sbjct: 208 QKLK 211
Score = 88 (36.0 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 45/212 (21%), Positives = 96/212 (45%)
Query: 677 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 736
+++++ + +++ +L+++E+E LA L + A +Q K E+K +++ K
Sbjct: 681 KDVQDELRIKENELQALEEE------LAHLKNTAE--KYRQLKQQWEMKTEEADLLQTKL 732
Query: 737 SYAEKHMASIEFDAK---IRELEFNLKQHEKLALQASLHYEDCKKEVEHCR----KHLSD 789
+ H E DA I E E LK +++ +A YE + ++++ + L D
Sbjct: 733 QQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAERERELKD 792
Query: 790 AKRQAESIAFITPELEKEFL-----EMPTTIEELEAAIQDNISQANSIFFLNQNILQEYE 844
A+R+ +S K+ E+ ELE +++ S + +N+ I + YE
Sbjct: 793 AQRKLDSAKTKADASSKKMKRNSRKEVEAITLELEELKREHASCEQQLEAVNEAI-KSYE 851
Query: 845 HRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
QI ++ + +K+ + + E+ KE
Sbjct: 852 G---QIAVVAAEVAKNKESVNKAQEEVTKQKE 880
Score = 81 (33.6 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 48/244 (19%), Positives = 113/244 (46%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREME---NHINLRKRKLE--SIEKEDD 698
+Q E R+ E+E L++E + N + ++ +++ E +L + KL+ S K+ +
Sbjct: 683 VQDELRIKENELQALEEELAHLKNTAEKYRQLKQQWEMKTEEADLLQTKLQQSSYHKQQE 742
Query: 699 INTALAKLVDQAADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHM----ASIEFDAKI 752
AL K+++++ + N ++ + E K ++E K + AE+ A + D+
Sbjct: 743 ELDALKKIIEESEETLKNTKEIQKKAEEKYEVLEN-KMKNAEAERERELKDAQRKLDSAK 801
Query: 753 RELEFN---LKQHEKLALQA-SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF 808
+ + + +K++ + ++A +L E+ K+E C + L E+I ++
Sbjct: 802 TKADASSKKMKRNSRKEVEAITLELEELKREHASCEQQLEAVN---EAIKSYEGQIAVVA 858
Query: 809 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 868
E+ E + A Q+ +++ + NI+ + + E K++ ++ +LK +
Sbjct: 859 AEVAKNKESVNKA-QEEVTKQKEVITAQDNIV-----KAKYAEVAKHKEQNNEYQLK--I 910
Query: 869 AEID 872
E+D
Sbjct: 911 KELD 914
Score = 70 (29.7 bits), Expect = 4.9e-06, Sum P(5) = 4.9e-06
Identities = 49/211 (23%), Positives = 91/211 (43%)
Query: 709 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDA-KIREL--EFNLKQHEKL 765
QAA + + +F+ ++++ L I + E+ +A ++ A K R+L ++ +K E
Sbjct: 669 QAASI-LTKFQELKDVQDEL-RIKENELQALEEELAHLKNTAEKYRQLKQQWEMKTEEAD 726
Query: 766 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 825
LQ L K+ E L ++E T E++K+ EE +++
Sbjct: 727 LLQTKLQQSSYHKQQEELDA-LKKIIEESEETLKNTKEIQKK-------AEEKYEVLENK 778
Query: 826 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR--------FLAEIDALKEK 877
+ A + +E + QR+++ TK +A K++KR E++ LK +
Sbjct: 779 MKNAEA------ERERELKDAQRKLDSAKTKADASSKKMKRNSRKEVEAITLELEELKRE 832
Query: 878 WLPTLRNLVAQINETF-SRNFQEMAVAGEVS 907
+ L A +NE S Q VA EV+
Sbjct: 833 HASCEQQLEA-VNEAIKSYEGQIAVVAAEVA 862
Score = 61 (26.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 57/263 (21%), Positives = 112/263 (42%)
Query: 650 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA--LAKLV 707
L ED + +E +E+ + + + + E + I ++E +EK D T L L
Sbjct: 241 LAEDTKERSAEELKEMQDKILKLQEELSENDKKIKALSHEIEELEKRKDKETGGILRSLE 300
Query: 708 DQAAD---LNIQ-QFKYAIEIKNLLVEIVSCKWSYAEKHMA--SIEFDAKIREL------ 755
D A+ +N + Q + ++ KNL E K EK+M S AK +E+
Sbjct: 301 DALAEAQRINTKSQSAFDLKKKNLASE--ENKRKELEKNMVEDSKTLAAKEKEVKKITDG 358
Query: 756 -----EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 810
E + K E LA A H+ + + ++A + +A ++ K E
Sbjct: 359 LNALQEASNKDAEALAA-AQQHFNAVSAGLSS-NEDGAEATLAGQMMA-CKNDISKAQTE 415
Query: 811 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 870
+L+ A Q+ ++ + ++ ++ E + ++ L K EA+ K+L +
Sbjct: 416 AKQAQMKLKHAQQELKTKQTEVKKMDSGYRKDQEALEA-VKKLKEKLEAEMKKLNYEENK 474
Query: 871 IDALKEKWLPTLRNLVAQINETF 893
++L EK R+ ++++ ET+
Sbjct: 475 EESLLEKRRQLSRD-ISRLKETY 496
Score = 58 (25.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 28/119 (23%), Positives = 52/119 (43%)
Query: 805 EKEFLEMPTTIEE-LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 863
E + E+ T +EE + IQ + + S + Q +++E EH D KE
Sbjct: 189 EAKLKEIKTILEEEITPTIQ-KLKEERSSYLEYQKVMREIEHLSHLYIAYQFLLAEDTKE 247
Query: 864 LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM-AVAGEVSLDEHESDFDKFGIL 921
R E+ +++K + ++ E S N +++ A++ E+ E D + GIL
Sbjct: 248 --RSAEELKEMQDK--------ILKLQEELSENDKKIKALSHEIEELEKRKDKETGGIL 296
Score = 56 (24.8 bits), Expect = 3.5e-17, Sum P(4) = 3.5e-17
Identities = 25/111 (22%), Positives = 53/111 (47%)
Query: 363 AYEPPHDKIEKLGSQILELGVQA--NQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDK 419
+Y ++++ L +I+E + N K +QK +EK + +NK+ + ++R ++++D
Sbjct: 736 SYHKQQEELDAL-KKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAE-AERERELKDA 793
Query: 420 NNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHAN 470
KL A + A + ++ + KE + LE+ R HA+
Sbjct: 794 QRKLDSAKTKADASS--------KKMKRNSRKEVEA-ITLELEELKREHAS 835
Score = 55 (24.4 bits), Expect = 3.5e-17, Sum P(4) = 3.5e-17
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E +K R+ E LE V+ +K+KL + +MKK Y
Sbjct: 429 ELKTKQTEVKKMDSGYRKDQEALEAVKKLKEKL---EAEMKKLNY 470
Score = 55 (24.4 bits), Expect = 4.4e-17, Sum P(4) = 4.4e-17
Identities = 15/61 (24%), Positives = 33/61 (54%)
Query: 376 SQILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA 432
+ +L+ +Q + Q+ E + KI+ +++ TL+ + K E+K L + ++N+ A
Sbjct: 725 ADLLQTKLQQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEA 784
Query: 433 E 433
E
Sbjct: 785 E 785
Score = 53 (23.7 bits), Expect = 4.9e-06, Sum P(5) = 4.9e-06
Identities = 13/64 (20%), Positives = 38/64 (59%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTA 702
++T+Q ++ + +K++E + + +++++ EM+ +N + K ES+ EK ++
Sbjct: 430 LKTKQTEVKKMDSGYRKDQEALEAVKKLKEKLEAEMKK-LNYEENKEESLLEKRRQLSRD 488
Query: 703 LAKL 706
+++L
Sbjct: 489 ISRL 492
Score = 49 (22.3 bits), Expect = 6.7e-10, Sum P(4) = 6.7e-10
Identities = 35/135 (25%), Positives = 56/135 (41%)
Query: 97 LRGDTKE---EHLTIMRKIDTRNKSEWFFNGKVVP--KGEVLEITKRFNIQVNNLTQFLP 151
L DTKE E L M+ + + E N K + E+ E+ KR + + + + L
Sbjct: 241 LAEDTKERSAEELKEMQDKILKLQEELSENDKKIKALSHEIEELEKRKDKETGGILRSL- 299
Query: 152 QDRVCEFAKLSPVKL----LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL 207
+D + E +++ L++ A + + +VE S L E VK+ D L
Sbjct: 300 EDALAEAQRINTKSQSAFDLKKKNLASEENKRKELEKNMVEDSKTLAAKEKEVKKITDGL 359
Query: 208 NQLKALNVEQEKDVE 222
N AL KD E
Sbjct: 360 N---ALQEASNKDAE 371
Score = 47 (21.6 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 387 QKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 438
+K L+K+ E K L + +++ +D L +++ +NK AL + A+ F A
Sbjct: 331 RKELEKNMVEDSKTLAAKEKEVKKITDGLNALQEASNKDAEAL--AAAQQHFNA 382
Score = 46 (21.3 bits), Expect = 1.4e-14, Sum P(4) = 1.4e-14
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 497 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 547
K+ FD+ N S E+ RKE + E+ + L + + ++ D +A++E
Sbjct: 312 KSQSAFDLKKKNLASEENKRKELEKNMVEDSKTLAAKEKEVKKITDGLNALQE 364
Score = 42 (19.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 13/75 (17%), Positives = 32/75 (42%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESM 237
Q +Q + ++ +L ++ ++ + +TL K + + E+ E + + + E
Sbjct: 729 QTKLQQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAERER 788
Query: 238 KKKLPWLKYDMKKAE 252
+ K K D K +
Sbjct: 789 ELKDAQRKLDSAKTK 803
Score = 41 (19.5 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 16/66 (24%), Positives = 31/66 (46%)
Query: 186 LVEKSSK-LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
++E+S + LK + K+ + L+ N + + ER R+ + K++S K K
Sbjct: 750 IIEESEETLKNTKEIQKKAEEKYEVLE--NKMKNAEAERERELKDAQRKLDSAKTKADAS 807
Query: 245 KYDMKK 250
MK+
Sbjct: 808 SKKMKR 813
Score = 39 (18.8 bits), Expect = 1.4e-14, Sum P(4) = 1.4e-14
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 405 TLRQCSDRLKDMEDKNNKLLHAL 427
T + ++ LK+M+DK KL L
Sbjct: 245 TKERSAEELKEMQDKILKLQEEL 267
Score = 39 (18.8 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 427 LRNSGAENIFEAYCWL 442
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
>TAIR|locus:2079107 [details] [associations]
symbol:ATSMC2 "AT3G47460" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005694 GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0005215 GO:GO:0006310
GO:GO:0030261 EMBL:AL096860 EMBL:AL132955 UniGene:At.35803
UniGene:At.71101 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06674 PANTHER:PTHR18937:SF9 HSSP:P32908 HOGENOM:HOG000163792
ProtClustDB:CLSN2685173 IPI:IPI00530229 PIR:T45706
RefSeq:NP_190330.1 ProteinModelPortal:Q9SN90 SMR:Q9SN90
STRING:Q9SN90 PaxDb:Q9SN90 PRIDE:Q9SN90 EnsemblPlants:AT3G47460.1
GeneID:823900 KEGG:ath:AT3G47460 TAIR:At3g47460 InParanoid:Q9SN90
OMA:WIASERQ PhylomeDB:Q9SN90 Genevestigator:Q9SN90 Uniprot:Q9SN90
Length = 1171
Score = 148 (57.2 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 57/228 (25%), Positives = 104/228 (45%)
Query: 22 NIIEIELHNFMTFDHLICKPG--SRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
+I EI L F ++ PG N + G NGSGKS+++ +I LG RA +
Sbjct: 2 HIKEICLEGFKSYATRTVVPGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAAN 61
Query: 80 IGAYVKRGEESGYIK--ISLRGDTKE---------EH--LTIMRKIDTRNKSEWFFNGKV 126
+ V + ++G + +S+ D E +H +T+ R+I K+++ NGK+
Sbjct: 62 LQELVYKQGQAGITRATVSVTFDNSERNRSPLGHEDHSEITVTRQIVVGGKNKYLINGKL 121
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA- 185
+V + + VNN + Q R+ + + P+++L E+A G + A
Sbjct: 122 AQPNQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPMEILSMLEEAAGTRMYENKKEAA 181
Query: 186 ---LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAEL 230
L +K +K+ I +++ D L L+ L E+ + ++ AEL
Sbjct: 182 LKTLEKKQTKVDEINKLLEK--DILPALEKLRREKSQYMQWANGNAEL 227
Score = 147 (56.8 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 80/342 (23%), Positives = 154/342 (45%)
Query: 660 KEREEIINIVQIE-KRKRREMENHINLRKRKL---ESIEKEDD-INTALAKLVDQ----A 710
K+ E+ I ++ + ++++ H N+R+R + E++ +E + + L L Q A
Sbjct: 787 KDLEKNIKTLKARIQASSKDLKGHENVRERLVMEQEAVTQEQSYLKSQLTSLRTQISTLA 846
Query: 711 ADLNIQQFKY-AIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLAL-Q 768
+D+ Q+ K AI+ K+ + K +A+ + I E E L++ + L +
Sbjct: 847 SDVGNQRAKVDAIQ-KDHDQSLSELKLIHAKMKECDTQISGSIAEQEKCLQKISDMKLDR 905
Query: 769 ASLHYEDCKKEVEHCRKHLS-DAKRQAESIAFITPE----------LEKEFLEMPTTIEE 817
L E + E+EH K+ S + E +IT E + E + EE
Sbjct: 906 KKLENEVTRMEMEH--KNCSVKVDKLVEKHTWITSEKRLFGNGGTDYDFESRDPHKAREE 963
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQ---EADKKELKRFLAEIDAL 874
LE D S + N+ + +E + + L TK+ E DK ++K+ + E+D
Sbjct: 964 LERLQTDQSSLEKRV---NKKVTAMFEKAEDEYNALMTKKNIIETDKSKIKKVIEELDEK 1020
Query: 875 KEKWLPTLRNLVAQINETFSRNFQEMAVAGEVS-LDEHESDFDKFGILIKVKFRQSGQLE 933
K++ TL+ ++N+ F F + + G +S L+ E G+ ++V F G +
Sbjct: 1021 KKE---TLKVTWVKVNQDFGSIFSTL-LPGTMSKLEPPEGGTFLDGLEVRVAF---GDVW 1073
Query: 934 VLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
S SGG+RS+ + +++L P ++DE++ +D
Sbjct: 1074 KQSLSELSGGQRSLLALSLILALLLFKPAPIYILDEVDAALD 1115
Score = 88 (36.0 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 67/292 (22%), Positives = 130/292 (44%)
Query: 656 AKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTA-LAKLVDQAADL 713
A+L + + + ++ K R+ H+ K K+ I+++ D +++L Q L
Sbjct: 225 AELDRLKRFCVAFEYVQAEKIRDNSIHVVEEMKIKMTGIDEQTDKTQGEISELEKQIKAL 284
Query: 714 N-IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLH 772
++ E+K L ++ S + + E +K+ +E L+ EK A + +
Sbjct: 285 TQAREASMGGEVKALSDKVDSLS------NEVTREL-SKLTNMEDTLQGEEKNAEKMVHN 337
Query: 773 YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI---SQA 829
ED KK VE + S + E A EL+++F E TT+EE E Q + S
Sbjct: 338 IEDLKKSVE---ERASALNKCDEGAA----ELKQKFQEFSTTLEECEREHQGILAGKSSG 390
Query: 830 NSIFFLNQNILQ---EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLV 886
+ L + + +++ L+TK +KELK +++ + +++ + L
Sbjct: 391 DEEKCLEDQLRDAKISVGTAETELKQLNTKISHCEKELKEKKSQLMSKQDEAVAVENELD 450
Query: 887 AQIN--ETFSRNFQEMAVA-GEV-SLD-EHESDFDKFGILIKVKFRQ-SGQL 932
A+ N E+ R F + G++ +L+ + ES+ + G +K K + S QL
Sbjct: 451 ARKNDVESVKRAFDSLPYKEGQMEALEKDRESELE-IGHRLKDKVHELSAQL 501
Score = 61 (26.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 41/214 (19%), Positives = 87/214 (40%)
Query: 777 KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLN 836
+K E ++ D K+ E A + ++ E+ +E +++ + I
Sbjct: 328 EKNAEKMVHNIEDLKKSVEERASALNKCDEGAAELKQKFQEFSTTLEECEREHQGIL-AG 386
Query: 837 QNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRN 896
++ E + + Q+ D + ELK+ +I +++ L+ +Q+ S+
Sbjct: 387 KSSGDEEKCLEDQLRDAKISVGTAETELKQLNTKISHCEKE----LKEKKSQL---MSK- 438
Query: 897 FQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGE--RSVSTILYLV 954
Q+ AVA E LD ++D + + GQ+E L +S E + ++ +
Sbjct: 439 -QDEAVAVENELDARKNDVESVKRAFDSLPYKEGQMEALEKDRESELEIGHRLKDKVHEL 497
Query: 955 SLQDLTNCPFRVVDEINQGMDPINERKMFQQLVR 988
S Q L N F D + + D + + +L++
Sbjct: 498 SAQ-LANVQFTYRDPV-KNFDRSKVKGVVAKLIK 529
Score = 55 (24.4 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 31/161 (19%), Positives = 65/161 (40%)
Query: 752 IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAE-----SIAFITPELEK 806
+ E E + H+K + + KE++ + +D K Q E F+ +
Sbjct: 676 LAEAETKFRAHQKSLSEIEANI----KELQPLQTKFTDMKAQLELKMYDMSLFLKRAEQN 731
Query: 807 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
E ++ +++LE +++ SQ L ++ ++ I+D +E K+L++
Sbjct: 732 EHHKLGDAVKKLEEEVEEMRSQIKEKEGLYKSCADTVSTLEKSIKDHDKNREGRLKDLEK 791
Query: 867 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVS 907
I LK + + ++L N ++ AV E S
Sbjct: 792 ---NIKTLKARIQASSKDLKGHENVRERLVMEQEAVTQEQS 829
Score = 54 (24.1 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 12/54 (22%), Positives = 31/54 (57%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDD 698
+TE + + + + +KE +E + + ++ + +EN ++ RK +ES+++ D
Sbjct: 411 ETELKQLNTKISHCEKELKEKKSQLMSKQDEAVAVENELDARKNDVESVKRAFD 464
Score = 54 (24.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 38/183 (20%), Positives = 88/183 (48%)
Query: 651 IEDEAAKLQ---KEREEII-NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 706
+E+E +++ KE+E + + + +++H R+ +L+ +EK +I T A++
Sbjct: 743 LEEEVEEMRSQIKEKEGLYKSCADTVSTLEKSIKDHDKNREGRLKDLEK--NIKTLKARI 800
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNL-KQHEKL 765
QA+ +++ + E + E V+ + SY + + S+ +I L ++ Q K+
Sbjct: 801 --QASSKDLKGHENVRERLVMEQEAVTQEQSYLKSQLTSLR--TQISTLASDVGNQRAKV 856
Query: 766 -ALQASLHYEDCKK------EVEHCRKHLSDA-KRQAESIAFITP-ELEKEFLEMPTTIE 816
A+Q H + + +++ C +S + Q + + I+ +L+++ LE T
Sbjct: 857 DAIQKD-HDQSLSELKLIHAKMKECDTQISGSIAEQEKCLQKISDMKLDRKKLENEVTRM 915
Query: 817 ELE 819
E+E
Sbjct: 916 EME 918
Score = 53 (23.7 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 373 KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
KLG + +L + + R Q EKE + T+ +KD DKN +
Sbjct: 735 KLGDAVKKLEEEVEEMRSQIKEKEGLYKSCADTVSTLEKSIKD-HDKNRE 783
Score = 53 (23.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 40/227 (17%), Positives = 94/227 (41%)
Query: 654 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK---------EDDINTALA 704
E + +K R+ I++V+ K K ++ + + ++ +EK E + +
Sbjct: 238 EYVQAEKIRDNSIHVVEEMKIKMTGIDEQTDKTQGEISELEKQIKALTQAREASMGGEVK 297
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAK--IRELEFNLKQH 762
L D+ L+ + + ++ N+ + + + AEK + +IE D K + E L +
Sbjct: 298 ALSDKVDSLSNEVTRELSKLTNM-EDTLQGEEKNAEKMVHNIE-DLKKSVEERASALNKC 355
Query: 763 EKLALQASLHYEDCKKEVEHC-RKH--LSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
++ A + +++ +E C R+H + K + + +L + + T EL+
Sbjct: 356 DEGAAELKQKFQEFSTTLEECEREHQGILAGKSSGDEEKCLEDQLRDAKISVGTAETELK 415
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
+ IS ++ L + +E+ ++ D + +KR
Sbjct: 416 Q-LNTKISHCEKELKEKKSQLMSKQDEAVAVENELDARKNDVESVKR 461
Score = 49 (22.3 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 47/224 (20%), Positives = 97/224 (43%)
Query: 659 QKEREEI-INIVQIE--KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLN- 714
QK EI NI +++ + K +M+ + L+ + K + N KL D L
Sbjct: 687 QKSLSEIEANIKELQPLQTKFTDMKAQLELKMYDMSLFLKRAEQNEH-HKLGDAVKKLEE 745
Query: 715 -IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF-NLKQHEK-LALQASL 771
+++ + I+ K L + + S EK SI+ K RE +L+++ K L +
Sbjct: 746 EVEEMRSQIKEKEGLYKSCADTVSTLEK---SIKDHDKNREGRLKDLEKNIKTLKARIQA 802
Query: 772 HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANS 831
+D K E+ R+ L + E++ L+ + + T I L + + + ++ ++
Sbjct: 803 SSKDLKGH-ENVRERLV---MEQEAVTQEQSYLKSQLTSLRTQISTLASDVGNQRAKVDA 858
Query: 832 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
I + L E + ++++ T+ E ++ L +I +K
Sbjct: 859 IQKDHDQSLSELKLIHAKMKECDTQISGSIAEQEKCLQKISDMK 902
Score = 41 (19.5 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 644 MQTEQRLIEDEAAKLQKEREEI 665
+ T++ +IE + +K++K EE+
Sbjct: 996 LMTKKNIIETDKSKIKKVIEEL 1017
Score = 38 (18.4 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 26/101 (25%), Positives = 45/101 (44%)
Query: 155 VCEFAKLSPVKLLEETEKAVGD-PQLPVQHCALVEK-----SSKLKTIECTVKR-NGDTL 207
V E K+ + E+T+K G+ +L Q AL + ++K + V + +
Sbjct: 252 VVEEMKIKMTGIDEQTDKTQGEISELEKQIKALTQAREASMGGEVKALSDKVDSLSNEVT 311
Query: 208 NQLKAL-NVE-----QEKDVERVRQRAELLEK-VESMKKKL 241
+L L N+E +EK+ E++ E L+K VE L
Sbjct: 312 RELSKLTNMEDTLQGEEKNAEKMVHNIEDLKKSVEERASAL 352
Score = 38 (18.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 418 DKNNKLLHALRNSGAENIFEAYCWL 442
D + + L SG NI ++ C++
Sbjct: 24 DPHFNAITGLNGSGKSNILDSICFV 48
Score = 37 (18.1 bits), Expect = 8.6e-15, Sum P(3) = 8.6e-15
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKE 396
HDK + + LE ++ + R+Q S K+
Sbjct: 778 HDKNREGRLKDLEKNIKTLKARIQASSKD 806
>GENEDB_PFALCIPARUM|PF11_0317 [details] [associations]
symbol:PF11_0317 "structural maintenance of
chromosome protein, putative" species:5833 "Plasmodium falciparum"
[GO:0000070 "mitotic sister chromatid segregation" evidence=ISS]
[GO:0003680 "AT DNA binding" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008278 "cohesin complex" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0016887 GO:GO:0000070
GO:GO:0003690 GO:GO:0003680 EMBL:AE014186 GO:GO:0008278
SUPFAM:SSF75553 KO:K06636 HSSP:Q9X0R4 RefSeq:XP_001347988.1
ProteinModelPortal:Q8II57 EnsemblProtists:PF11_0317:mRNA
GeneID:810864 KEGG:pfa:PF11_0317 EuPathDB:PlasmoDB:PF3D7_1130700
HOGENOM:HOG000282411 OMA:CEREASK ProtClustDB:CLSZ2515177
Uniprot:Q8II57
Length = 1818
Score = 157 (60.3 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 62/234 (26%), Positives = 113/234 (48%)
Query: 26 IELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIG--A 82
I + NF ++ D I P S+ +IGPNGSGKS+++ I ALG + + L R ++
Sbjct: 294 IIVSNFKSYEDENIIGPFSKFTSIIGPNGSGKSNIMDCICFALGINNKYL-RVKNLRNLI 352
Query: 83 YVKRGEESG-------YIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEI 135
Y K E++ Y+KI L + +E++ I R ++ + S ++ N K+V + E +
Sbjct: 353 YHKENEKAEDINKRICYVKIIL--ECNKENVEIKRTLNYKGVSNFYINDKLVDQKEYMNF 410
Query: 136 TKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
++ I+ T + Q + + P +L + E G + + + EK K K
Sbjct: 411 LRKNRIETKTKTCLIFQGDIEDIINKKPNELAKLFEYISGSDEYEQIYEDIKEKL-KEKQ 469
Query: 196 IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
I C +N LN+ K +EQE + +++ + +E K K + +Y++K
Sbjct: 470 INC---KN--YLNEKK--KIEQEMKIHKIQMN----DNIEHNKLKENY-EYEIK 511
Score = 112 (44.5 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 38/169 (22%), Positives = 76/169 (44%)
Query: 835 LNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK----WLPT---LRNLVA 887
+N N +EYE +++ + ++KE F L++K +L ++N++
Sbjct: 1605 VNCNAEKEYEKLTSKLKSIDVSLSEERKECNLFERNFRILQKKRSYKFLHCFNYIKNIID 1664
Query: 888 QINETFSRNFQEMAVAGEVSLDE---HESDFDKFGILIKVKFRQSGQLE-VLSAHHQSGG 943
+ + N + V G+ LD +E + D +K+ ++ SGG
Sbjct: 1665 NVYNNLTYNAKHH-VGGQAFLDLCNFNEFNKDDEPFYCGIKYNNMPPMKRYFEISELSGG 1723
Query: 944 ERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 992
E+S+S + + S+Q N F ++DE++ MDP+ + + + L SQ
Sbjct: 1724 EKSISALALIFSIQKYINNSFIILDEVDANMDPLKIQSLTRYLNSINSQ 1772
Score = 97 (39.2 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 60/252 (23%), Positives = 113/252 (44%)
Query: 657 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQ 716
KL E+EE IN + R + IN ++ + E +K+ I++ L K NI
Sbjct: 1173 KLINEKEECINNINECNRNIIQTNELINKQQSEYELNKKK--ISSILIKK-------NI- 1222
Query: 717 QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDC 776
F+ IE KN ++E K +K + +I+ K L+ K+ K S++ +D
Sbjct: 1223 -FEKEIEAKNKVMENYEQK---IDK-LKNIDLKKKFELLDTYEKELFKERNSLSMYQKDA 1277
Query: 777 KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFL- 835
K + H K + + E ++ + + I++L I + + + N I FL
Sbjct: 1278 FKNLNHKLK-IDNIYEIIEHNLRDIDKINENINRIKNNIKKLNDDINELLDKKNEINFLE 1336
Query: 836 -NQNILQEYEHRQRQIEDLSTKQEADKKE----LKRFLAEIDALKEKWLPTLRNLVAQIN 890
N+ + E E+ ++Q+ L KQE + E +++ L +++ K L NL ++N
Sbjct: 1337 KNEESINE-ENIKKQLISLE-KQEKESNEQIDNIQKILQKLEEDKINIYKNLNNLNQELN 1394
Query: 891 E---TFSRNFQE 899
+ + NF++
Sbjct: 1395 QLRDNINTNFEK 1406
Score = 79 (32.9 bits), Expect = 7.8e-11, Sum P(3) = 7.8e-11
Identities = 55/251 (21%), Positives = 116/251 (46%)
Query: 659 QKEREEIINIVQIEKRKRREMENHINLRKR--KLESIEKE--DDINTALAKLVDQAADLN 714
+KE E +++ ++K +++N I+L+K+ L++ EKE + N+ D +LN
Sbjct: 1224 EKEIEAKNKVMENYEQKIDKLKN-IDLKKKFELLDTYEKELFKERNSLSMYQKDAFKNLN 1282
Query: 715 IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNL-----KQHEKLALQ 768
+ ++I N+ EI+ +K +I I++L ++ K++E L+
Sbjct: 1283 -----HKLKIDNIY-EIIEHNLRDIDKINENINRIKNNIKKLNDDINELLDKKNEINFLE 1336
Query: 769 A---SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 825
S++ E+ KK++ K ++ Q ++I I +LE++ + + + L + N
Sbjct: 1337 KNEESINEENIKKQLISLEKQEKESNEQIDNIQKILQKLEEDKINIYKNLNNLNQEL--N 1394
Query: 826 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 885
+ N +N N ++YEH + +IE+ K + + + + E D T NL
Sbjct: 1395 QLRDN----INTNF-EKYEHIENKIENCQKKIQIYTQFINDLINECDINSVNIFLT-NNL 1448
Query: 886 VAQINETFSRN 896
+ I++ N
Sbjct: 1449 LKDIHDQVDIN 1459
Score = 78 (32.5 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 56/211 (26%), Positives = 95/211 (45%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 706
E L+ E + LQ E ++I+N Q K+K +E + NL K+K ESI+ E+DI ++
Sbjct: 530 EDLLLYKEES-LQFE-QDILN--Q-NKKKANTLEKN-NLIKKK-ESIKIEEDIKKNYVQI 582
Query: 707 VDQAADLN--IQQFKYAIEIKNLLVEIVSCKWSYAE---KHMASIEFDAKI--RELEFNL 759
LN ++ K+ + LV K + E K M ++ K ++LE
Sbjct: 583 NQLKILLNEISEKKKFCNDSLQKLVSNKKLKINMQEHCNKFMENLNLQIKEQNKKLENEY 642
Query: 760 KQHEKLALQASLHYEDC-----KKEVEHCR--KHLSDAKRQAESIAFITPELEKEFLEMP 812
K K+ ++ YE C K ++E C+ H+ D + Q ES + E K+ +
Sbjct: 643 KNKLKINIKFFSKYE-CVQNIIKTKIEECKMNSHI-DQQDQNESNVHLNNENIKKKNDKK 700
Query: 813 TTIEELEAAIQDNISQANSIFFLNQNILQEY 843
++L D++ +N N N + EY
Sbjct: 701 GK-KKLNINNHDDMKISNQDVSNNNNNMMEY 730
Score = 63 (27.2 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 28/111 (25%), Positives = 53/111 (47%)
Query: 363 AYEPPHDKIEKLGSQILEL--GVQANQKR--------LQKSEKEKILNQNKLTLRQCSDR 412
AY+ +++I KL S I E +Q N+ + LQK ++ +IL + L +
Sbjct: 833 AYDQLNERIYKLNSVIKEQDDNIQNNKMKIKMWNETILQKEKQIEILEEQTNILNVHKNE 892
Query: 413 LKDMEDKNNKLLHALRNS-GAENIFEAYCWLQQHRHELNKEAYGPVLLEVN 462
L E K + ++ L+N+ G + +F+ L Q +++ A V+ + N
Sbjct: 893 LISFEKKRD-IIKNLKNTFGHDQVFDEVSNLYQVNNQIYYTAVNNVIHKYN 942
Score = 63 (27.2 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 31/171 (18%), Positives = 78/171 (45%)
Query: 672 EKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEI 731
+K+K++E + +K + S D +KL++ D + +Q +Y N
Sbjct: 1489 KKKKKKESKGKSKSKKNHMSS----DPYQKRKSKLLE---DSDSEQ-EYNTSNSNNTSCN 1540
Query: 732 VSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAK 791
+S + + +H + + + + F+L + L+ + +D E E+ K + + K
Sbjct: 1541 ISEEENDIHEHDEEEQNNILLSNISFDLLSDD---LKNMENDKDINNEKENMEKEI-ERK 1596
Query: 792 RQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 842
++ + + EKE+ ++ + ++ ++ ++ + + N +F N ILQ+
Sbjct: 1597 KKLLKLKNVNCNAEKEYEKLTSKLKSIDVSLSEERKECN-LFERNFRILQK 1646
Score = 61 (26.5 bits), Expect = 8.1e-07, Sum P(3) = 8.1e-07
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHC----RKHLSDA-KRQAESIAFITPELEKEFLEMP 812
N+ + L SL +D K+ E C RK + + ++E +A+ +L + ++
Sbjct: 789 NININNYTNLSCSLK-KDIKELQEECDTLNRKKQKELLEYESEKLAY--DQLNERIYKLN 845
Query: 813 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 872
+ I+E + IQ+N + I N+ ILQ+ E + +E+ + K EL F + D
Sbjct: 846 SVIKEQDDNIQNNKMK---IKMWNETILQK-EKQIEILEEQTNILNVHKNELISFEKKRD 901
Query: 873 ALK 875
+K
Sbjct: 902 IIK 904
Score = 56 (24.8 bits), Expect = 6.6e-13, Sum P(4) = 6.6e-13
Identities = 30/128 (23%), Positives = 59/128 (46%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+++E L +++++ +++ E K + +N R KL S+ KE D N Q
Sbjct: 809 LQEECDTLNRKKQK--ELLEYESEKLAY--DQLNERIYKLNSVIKEQDDNI-------QN 857
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMAS-IEFDAKIRELEFNLKQ---HEKLA 766
+ I+ + I K +EI+ + + H I F+ K R++ NLK H+++
Sbjct: 858 NKMKIKMWNETILQKEKQIEILEEQTNILNVHKNELISFEKK-RDIIKNLKNTFGHDQVF 916
Query: 767 LQASLHYE 774
+ S Y+
Sbjct: 917 DEVSNLYQ 924
Score = 54 (24.1 bits), Expect = 8.2e-13, Sum P(4) = 8.2e-13
Identities = 17/78 (21%), Positives = 41/78 (52%)
Query: 378 ILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA---EN 434
I E+ ++ N + + K + +N+ K +++ +D + ++ DK N++ +N + EN
Sbjct: 1290 IYEI-IEHNLRDIDKINEN--INRIKNNIKKLNDDINELLDKKNEINFLEKNEESINEEN 1346
Query: 435 IFEAYCWLQQHRHELNKE 452
I + L++ E N++
Sbjct: 1347 IKKQLISLEKQEKESNEQ 1364
Score = 54 (24.1 bits), Expect = 8.0e-10, Sum P(3) = 8.0e-10
Identities = 37/184 (20%), Positives = 83/184 (45%)
Query: 815 IEELEAAIQDNISQAN-SIFFLNQNILQ---EYEHRQRQIEDLSTKQEADKKELKRFLAE 870
I E E I +NI++ N +I N+ I + EYE +++I + K+ +KE++
Sbjct: 1175 INEKEECI-NNINECNRNIIQTNELINKQQSEYELNKKKISSILIKKNIFEKEIEAKNKV 1233
Query: 871 IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSG 930
++ ++K + L+N+ + +++ SL ++ D K + K +
Sbjct: 1234 MENYEQK-IDKLKNIDLKKKFELLDTYEKELFKERNSLSMYQKDAFKN---LNHKLKIDN 1289
Query: 931 QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAA 990
E++ H+ R + I ++ + N ++ D+IN+ +D NE ++ +
Sbjct: 1290 IYEIIE-HNL----RDIDKINE--NINRIKNNIKKLNDDINELLDKKNEINFLEKNEESI 1342
Query: 991 SQPN 994
++ N
Sbjct: 1343 NEEN 1346
Score = 51 (23.0 bits), Expect = 1.6e-12, Sum P(4) = 1.6e-12
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 393 SEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKE 452
S+ EK N +L + + + + E+ N + RN N QQ +ELNK+
Sbjct: 1156 SDIEKF-NNKRLNINLYNKLINEKEECINNINECNRNIIQTN---ELINKQQSEYELNKK 1211
Query: 453 AYGPVLLEVNV 463
+L++ N+
Sbjct: 1212 KISSILIKKNI 1222
Score = 49 (22.3 bits), Expect = 9.3e-13, Sum P(3) = 9.3e-13
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 387 QKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 434
QK LQK E++KI + +N L Q ++L+D + N + + N EN
Sbjct: 1369 QKILQKLEEDKINIYKNLNNLNQELNQLRDNINTNFEKYEHIENK-IEN 1416
Score = 42 (19.8 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 658 LQKEREEIINIVQIEKRKRREME---NHINLRKRKLESIEKE 696
LQK E+ INI + +E+ ++IN K E IE +
Sbjct: 1372 LQKLEEDKINIYKNLNNLNQELNQLRDNINTNFEKYEHIENK 1413
Score = 42 (19.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 44/245 (17%), Positives = 94/245 (38%)
Query: 644 MQTEQ-RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
+Q Q +++ +E ++ +K + + + K+ + M+ H N L KE N
Sbjct: 580 VQINQLKILLNEISEKKKFCNDSLQKLVSNKKLKINMQEHCNKFMENLNLQIKEQ--NKK 637
Query: 703 LAKLVDQAADLNIQQF-KYAIEIKNLL-VEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
L +NI+ F KY ++N++ +I CK + E + + K
Sbjct: 638 LENEYKNKLKINIKFFSKYEC-VQNIIKTKIEECKMNSHIDQQDQNESNVHLNNENIKKK 696
Query: 761 QHEKLALQASLH-YEDCK---KEVEHCRKHLSDAKRQAESIAFITPE--LEKEFLEMPTT 814
+K + +++ ++D K ++V + ++ + + F+ E L K ++
Sbjct: 697 NDKKGKKKLNINNHDDMKISNQDVSNNNNNMMEY--YTNMLNFLKDEKILNKIHIDSTNN 754
Query: 815 IEEL--EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 872
E I + I + + L + I + + + KK++K E D
Sbjct: 755 YENPYENYNIIEFIENIDEYKKCKETYLYLCANSNININNYTNLSCSLKKDIKELQEECD 814
Query: 873 ALKEK 877
L K
Sbjct: 815 TLNRK 819
Score = 41 (19.5 bits), Expect = 6.6e-13, Sum P(4) = 6.6e-13
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 399 LNQNKLTLRQCSDRLKDMEDKNNKLL 424
+NQ K+ L + S++ K D KL+
Sbjct: 582 INQLKILLNEISEKKKFCNDSLQKLV 607
Score = 41 (19.5 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 398 ILNQNKLTLRQCSDRLKDMEDKNNKLLH 425
++++N + ++R D+E NNK L+
Sbjct: 1140 VISKNNNLIIDITNRYSDIEKFNNKRLN 1167
Score = 37 (18.1 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
HD+ E+ + + L+ E +K +N K + K++E K KLL
Sbjct: 1551 HDEEEQNNILLSNISFDLLSDDLKNMENDKDINNEKENME------KEIERKK-KLLKLK 1603
Query: 428 R-NSGAENIFE 437
N AE +E
Sbjct: 1604 NVNCNAEKEYE 1614
>UNIPROTKB|Q8II57 [details] [associations]
symbol:PF11_0317 "Structural maintenance of chromosome
protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0000070 "mitotic sister chromatid segregation" evidence=ISS]
[GO:0003680 "AT DNA binding" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0008278 "cohesin complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0016887 GO:GO:0000070
GO:GO:0003690 GO:GO:0003680 EMBL:AE014186 GO:GO:0008278
SUPFAM:SSF75553 KO:K06636 HSSP:Q9X0R4 RefSeq:XP_001347988.1
ProteinModelPortal:Q8II57 EnsemblProtists:PF11_0317:mRNA
GeneID:810864 KEGG:pfa:PF11_0317 EuPathDB:PlasmoDB:PF3D7_1130700
HOGENOM:HOG000282411 OMA:CEREASK ProtClustDB:CLSZ2515177
Uniprot:Q8II57
Length = 1818
Score = 157 (60.3 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 62/234 (26%), Positives = 113/234 (48%)
Query: 26 IELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIG--A 82
I + NF ++ D I P S+ +IGPNGSGKS+++ I ALG + + L R ++
Sbjct: 294 IIVSNFKSYEDENIIGPFSKFTSIIGPNGSGKSNIMDCICFALGINNKYL-RVKNLRNLI 352
Query: 83 YVKRGEESG-------YIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEI 135
Y K E++ Y+KI L + +E++ I R ++ + S ++ N K+V + E +
Sbjct: 353 YHKENEKAEDINKRICYVKIIL--ECNKENVEIKRTLNYKGVSNFYINDKLVDQKEYMNF 410
Query: 136 TKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
++ I+ T + Q + + P +L + E G + + + EK K K
Sbjct: 411 LRKNRIETKTKTCLIFQGDIEDIINKKPNELAKLFEYISGSDEYEQIYEDIKEKL-KEKQ 469
Query: 196 IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
I C +N LN+ K +EQE + +++ + +E K K + +Y++K
Sbjct: 470 INC---KN--YLNEKK--KIEQEMKIHKIQMN----DNIEHNKLKENY-EYEIK 511
Score = 112 (44.5 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 38/169 (22%), Positives = 76/169 (44%)
Query: 835 LNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK----WLPT---LRNLVA 887
+N N +EYE +++ + ++KE F L++K +L ++N++
Sbjct: 1605 VNCNAEKEYEKLTSKLKSIDVSLSEERKECNLFERNFRILQKKRSYKFLHCFNYIKNIID 1664
Query: 888 QINETFSRNFQEMAVAGEVSLDE---HESDFDKFGILIKVKFRQSGQLE-VLSAHHQSGG 943
+ + N + V G+ LD +E + D +K+ ++ SGG
Sbjct: 1665 NVYNNLTYNAKHH-VGGQAFLDLCNFNEFNKDDEPFYCGIKYNNMPPMKRYFEISELSGG 1723
Query: 944 ERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 992
E+S+S + + S+Q N F ++DE++ MDP+ + + + L SQ
Sbjct: 1724 EKSISALALIFSIQKYINNSFIILDEVDANMDPLKIQSLTRYLNSINSQ 1772
Score = 97 (39.2 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 60/252 (23%), Positives = 113/252 (44%)
Query: 657 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQ 716
KL E+EE IN + R + IN ++ + E +K+ I++ L K NI
Sbjct: 1173 KLINEKEECINNINECNRNIIQTNELINKQQSEYELNKKK--ISSILIKK-------NI- 1222
Query: 717 QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDC 776
F+ IE KN ++E K +K + +I+ K L+ K+ K S++ +D
Sbjct: 1223 -FEKEIEAKNKVMENYEQK---IDK-LKNIDLKKKFELLDTYEKELFKERNSLSMYQKDA 1277
Query: 777 KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFL- 835
K + H K + + E ++ + + I++L I + + + N I FL
Sbjct: 1278 FKNLNHKLK-IDNIYEIIEHNLRDIDKINENINRIKNNIKKLNDDINELLDKKNEINFLE 1336
Query: 836 -NQNILQEYEHRQRQIEDLSTKQEADKKE----LKRFLAEIDALKEKWLPTLRNLVAQIN 890
N+ + E E+ ++Q+ L KQE + E +++ L +++ K L NL ++N
Sbjct: 1337 KNEESINE-ENIKKQLISLE-KQEKESNEQIDNIQKILQKLEEDKINIYKNLNNLNQELN 1394
Query: 891 E---TFSRNFQE 899
+ + NF++
Sbjct: 1395 QLRDNINTNFEK 1406
Score = 79 (32.9 bits), Expect = 7.8e-11, Sum P(3) = 7.8e-11
Identities = 55/251 (21%), Positives = 116/251 (46%)
Query: 659 QKEREEIINIVQIEKRKRREMENHINLRKR--KLESIEKE--DDINTALAKLVDQAADLN 714
+KE E +++ ++K +++N I+L+K+ L++ EKE + N+ D +LN
Sbjct: 1224 EKEIEAKNKVMENYEQKIDKLKN-IDLKKKFELLDTYEKELFKERNSLSMYQKDAFKNLN 1282
Query: 715 IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNL-----KQHEKLALQ 768
+ ++I N+ EI+ +K +I I++L ++ K++E L+
Sbjct: 1283 -----HKLKIDNIY-EIIEHNLRDIDKINENINRIKNNIKKLNDDINELLDKKNEINFLE 1336
Query: 769 A---SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 825
S++ E+ KK++ K ++ Q ++I I +LE++ + + + L + N
Sbjct: 1337 KNEESINEENIKKQLISLEKQEKESNEQIDNIQKILQKLEEDKINIYKNLNNLNQEL--N 1394
Query: 826 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 885
+ N +N N ++YEH + +IE+ K + + + + E D T NL
Sbjct: 1395 QLRDN----INTNF-EKYEHIENKIENCQKKIQIYTQFINDLINECDINSVNIFLT-NNL 1448
Query: 886 VAQINETFSRN 896
+ I++ N
Sbjct: 1449 LKDIHDQVDIN 1459
Score = 78 (32.5 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 56/211 (26%), Positives = 95/211 (45%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 706
E L+ E + LQ E ++I+N Q K+K +E + NL K+K ESI+ E+DI ++
Sbjct: 530 EDLLLYKEES-LQFE-QDILN--Q-NKKKANTLEKN-NLIKKK-ESIKIEEDIKKNYVQI 582
Query: 707 VDQAADLN--IQQFKYAIEIKNLLVEIVSCKWSYAE---KHMASIEFDAKI--RELEFNL 759
LN ++ K+ + LV K + E K M ++ K ++LE
Sbjct: 583 NQLKILLNEISEKKKFCNDSLQKLVSNKKLKINMQEHCNKFMENLNLQIKEQNKKLENEY 642
Query: 760 KQHEKLALQASLHYEDC-----KKEVEHCR--KHLSDAKRQAESIAFITPELEKEFLEMP 812
K K+ ++ YE C K ++E C+ H+ D + Q ES + E K+ +
Sbjct: 643 KNKLKINIKFFSKYE-CVQNIIKTKIEECKMNSHI-DQQDQNESNVHLNNENIKKKNDKK 700
Query: 813 TTIEELEAAIQDNISQANSIFFLNQNILQEY 843
++L D++ +N N N + EY
Sbjct: 701 GK-KKLNINNHDDMKISNQDVSNNNNNMMEY 730
Score = 63 (27.2 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 28/111 (25%), Positives = 53/111 (47%)
Query: 363 AYEPPHDKIEKLGSQILEL--GVQANQKR--------LQKSEKEKILNQNKLTLRQCSDR 412
AY+ +++I KL S I E +Q N+ + LQK ++ +IL + L +
Sbjct: 833 AYDQLNERIYKLNSVIKEQDDNIQNNKMKIKMWNETILQKEKQIEILEEQTNILNVHKNE 892
Query: 413 LKDMEDKNNKLLHALRNS-GAENIFEAYCWLQQHRHELNKEAYGPVLLEVN 462
L E K + ++ L+N+ G + +F+ L Q +++ A V+ + N
Sbjct: 893 LISFEKKRD-IIKNLKNTFGHDQVFDEVSNLYQVNNQIYYTAVNNVIHKYN 942
Score = 63 (27.2 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 31/171 (18%), Positives = 78/171 (45%)
Query: 672 EKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEI 731
+K+K++E + +K + S D +KL++ D + +Q +Y N
Sbjct: 1489 KKKKKKESKGKSKSKKNHMSS----DPYQKRKSKLLE---DSDSEQ-EYNTSNSNNTSCN 1540
Query: 732 VSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAK 791
+S + + +H + + + + F+L + L+ + +D E E+ K + + K
Sbjct: 1541 ISEEENDIHEHDEEEQNNILLSNISFDLLSDD---LKNMENDKDINNEKENMEKEI-ERK 1596
Query: 792 RQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 842
++ + + EKE+ ++ + ++ ++ ++ + + N +F N ILQ+
Sbjct: 1597 KKLLKLKNVNCNAEKEYEKLTSKLKSIDVSLSEERKECN-LFERNFRILQK 1646
Score = 61 (26.5 bits), Expect = 8.1e-07, Sum P(3) = 8.1e-07
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHC----RKHLSDA-KRQAESIAFITPELEKEFLEMP 812
N+ + L SL +D K+ E C RK + + ++E +A+ +L + ++
Sbjct: 789 NININNYTNLSCSLK-KDIKELQEECDTLNRKKQKELLEYESEKLAY--DQLNERIYKLN 845
Query: 813 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 872
+ I+E + IQ+N + I N+ ILQ+ E + +E+ + K EL F + D
Sbjct: 846 SVIKEQDDNIQNNKMK---IKMWNETILQK-EKQIEILEEQTNILNVHKNELISFEKKRD 901
Query: 873 ALK 875
+K
Sbjct: 902 IIK 904
Score = 56 (24.8 bits), Expect = 6.6e-13, Sum P(4) = 6.6e-13
Identities = 30/128 (23%), Positives = 59/128 (46%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+++E L +++++ +++ E K + +N R KL S+ KE D N Q
Sbjct: 809 LQEECDTLNRKKQK--ELLEYESEKLAY--DQLNERIYKLNSVIKEQDDNI-------QN 857
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMAS-IEFDAKIRELEFNLKQ---HEKLA 766
+ I+ + I K +EI+ + + H I F+ K R++ NLK H+++
Sbjct: 858 NKMKIKMWNETILQKEKQIEILEEQTNILNVHKNELISFEKK-RDIIKNLKNTFGHDQVF 916
Query: 767 LQASLHYE 774
+ S Y+
Sbjct: 917 DEVSNLYQ 924
Score = 54 (24.1 bits), Expect = 8.2e-13, Sum P(4) = 8.2e-13
Identities = 17/78 (21%), Positives = 41/78 (52%)
Query: 378 ILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA---EN 434
I E+ ++ N + + K + +N+ K +++ +D + ++ DK N++ +N + EN
Sbjct: 1290 IYEI-IEHNLRDIDKINEN--INRIKNNIKKLNDDINELLDKKNEINFLEKNEESINEEN 1346
Query: 435 IFEAYCWLQQHRHELNKE 452
I + L++ E N++
Sbjct: 1347 IKKQLISLEKQEKESNEQ 1364
Score = 54 (24.1 bits), Expect = 8.0e-10, Sum P(3) = 8.0e-10
Identities = 37/184 (20%), Positives = 83/184 (45%)
Query: 815 IEELEAAIQDNISQAN-SIFFLNQNILQ---EYEHRQRQIEDLSTKQEADKKELKRFLAE 870
I E E I +NI++ N +I N+ I + EYE +++I + K+ +KE++
Sbjct: 1175 INEKEECI-NNINECNRNIIQTNELINKQQSEYELNKKKISSILIKKNIFEKEIEAKNKV 1233
Query: 871 IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSG 930
++ ++K + L+N+ + +++ SL ++ D K + K +
Sbjct: 1234 MENYEQK-IDKLKNIDLKKKFELLDTYEKELFKERNSLSMYQKDAFKN---LNHKLKIDN 1289
Query: 931 QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAA 990
E++ H+ R + I ++ + N ++ D+IN+ +D NE ++ +
Sbjct: 1290 IYEIIE-HNL----RDIDKINE--NINRIKNNIKKLNDDINELLDKKNEINFLEKNEESI 1342
Query: 991 SQPN 994
++ N
Sbjct: 1343 NEEN 1346
Score = 51 (23.0 bits), Expect = 1.6e-12, Sum P(4) = 1.6e-12
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 393 SEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKE 452
S+ EK N +L + + + + E+ N + RN N QQ +ELNK+
Sbjct: 1156 SDIEKF-NNKRLNINLYNKLINEKEECINNINECNRNIIQTN---ELINKQQSEYELNKK 1211
Query: 453 AYGPVLLEVNV 463
+L++ N+
Sbjct: 1212 KISSILIKKNI 1222
Score = 49 (22.3 bits), Expect = 9.3e-13, Sum P(3) = 9.3e-13
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 387 QKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 434
QK LQK E++KI + +N L Q ++L+D + N + + N EN
Sbjct: 1369 QKILQKLEEDKINIYKNLNNLNQELNQLRDNINTNFEKYEHIENK-IEN 1416
Score = 42 (19.8 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 658 LQKEREEIINIVQIEKRKRREME---NHINLRKRKLESIEKE 696
LQK E+ INI + +E+ ++IN K E IE +
Sbjct: 1372 LQKLEEDKINIYKNLNNLNQELNQLRDNINTNFEKYEHIENK 1413
Score = 42 (19.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 44/245 (17%), Positives = 94/245 (38%)
Query: 644 MQTEQ-RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
+Q Q +++ +E ++ +K + + + K+ + M+ H N L KE N
Sbjct: 580 VQINQLKILLNEISEKKKFCNDSLQKLVSNKKLKINMQEHCNKFMENLNLQIKEQ--NKK 637
Query: 703 LAKLVDQAADLNIQQF-KYAIEIKNLL-VEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
L +NI+ F KY ++N++ +I CK + E + + K
Sbjct: 638 LENEYKNKLKINIKFFSKYEC-VQNIIKTKIEECKMNSHIDQQDQNESNVHLNNENIKKK 696
Query: 761 QHEKLALQASLH-YEDCK---KEVEHCRKHLSDAKRQAESIAFITPE--LEKEFLEMPTT 814
+K + +++ ++D K ++V + ++ + + F+ E L K ++
Sbjct: 697 NDKKGKKKLNINNHDDMKISNQDVSNNNNNMMEY--YTNMLNFLKDEKILNKIHIDSTNN 754
Query: 815 IEEL--EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 872
E I + I + + L + I + + + KK++K E D
Sbjct: 755 YENPYENYNIIEFIENIDEYKKCKETYLYLCANSNININNYTNLSCSLKKDIKELQEECD 814
Query: 873 ALKEK 877
L K
Sbjct: 815 TLNRK 819
Score = 41 (19.5 bits), Expect = 6.6e-13, Sum P(4) = 6.6e-13
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 399 LNQNKLTLRQCSDRLKDMEDKNNKLL 424
+NQ K+ L + S++ K D KL+
Sbjct: 582 INQLKILLNEISEKKKFCNDSLQKLV 607
Score = 41 (19.5 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 398 ILNQNKLTLRQCSDRLKDMEDKNNKLLH 425
++++N + ++R D+E NNK L+
Sbjct: 1140 VISKNNNLIIDITNRYSDIEKFNNKRLN 1167
Score = 37 (18.1 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
HD+ E+ + + L+ E +K +N K + K++E K KLL
Sbjct: 1551 HDEEEQNNILLSNISFDLLSDDLKNMENDKDINNEKENME------KEIERKK-KLLKLK 1603
Query: 428 R-NSGAENIFE 437
N AE +E
Sbjct: 1604 NVNCNAEKEYE 1614
>UNIPROTKB|F1SP73 [details] [associations]
symbol:F1SP73 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000796
"condensin complex" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005694 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:WIASERQ
Ensembl:ENSSSCT00000005947 Uniprot:F1SP73
Length = 1169
Score = 179 (68.1 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 75/343 (21%), Positives = 146/343 (42%)
Query: 653 DEAAKLQKEREEIINIVQIE----KRKRREMENHINLRKRKLESIEKEDDINTALAKLVD 708
D ++K KE+++ + + +E KR+ E + ++S E + I A++
Sbjct: 784 DASSKKMKEKQQEVEAITLELEELKREHASCEQQLEAVNEAIKSYEGQ--IAVVAAEVAK 841
Query: 709 QAADLNIQQFKYAIEIKNLLVE--IVSCKWSYAEKHMA-SIEFDAKIRELEFNLKQHEKL 765
+N Q + + + + + IV K++ KH + E+ KI+EL+ N+ +H++
Sbjct: 842 NKESVNKAQEEVTKQKEVITAQDNIVKAKYAEVAKHKEQNNEYQLKIKELDHNINKHKRE 901
Query: 766 ALQASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
A A+ K+ + + KHL A P KE + +EE++ +
Sbjct: 902 AEDAAAKVSKMLKDYDWINTDKHLFGQPNTAYDFKTTNP---KEASQRLQKLEEMKEKLG 958
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 883
N++ N+L E E R DL K+ + + + LA I+ L +K L
Sbjct: 959 RNVNMRA------MNVLTEAEERYN---DLMKKKRIVENDKSKILATIEDLDQKKNQALN 1009
Query: 884 NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGG 943
++N+ F F + L E G+ KV + + E L+ SGG
Sbjct: 1010 IAWQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELSGG 1066
Query: 944 ERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
+RS+ + ++S+ P ++DE++ +D + + + Q L
Sbjct: 1067 QRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1109
Score = 99 (39.9 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 46/211 (21%), Positives = 97/211 (45%)
Query: 677 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 736
+++++ + +++ +L+++E+E LA L + A +Q K E+K +++ K
Sbjct: 660 KDVQDELRIKENELQALEEE------LAHLKNTAE--KYRQLKQQWEMKTEEADLLQTKL 711
Query: 737 SYAEKHMASIEFDAK---IRELEFNLKQHEKLALQASLHYEDCKKEVEHCR----KHLSD 789
+ H E DA I E E LK +++ +A YE + ++++ + L D
Sbjct: 712 QQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAERERELKD 771
Query: 790 AKRQAESIAFITPELEKEFLEMPTTIE----ELEAAIQDNISQANSIFFLNQNILQEYEH 845
A+R+ +S K+ E +E ELE +++ S + +N+ I + YE
Sbjct: 772 AQRKLDSAKTKADASSKKMKEKQQEVEAITLELEELKREHASCEQQLEAVNEAI-KSYEG 830
Query: 846 RQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
QI ++ + +K+ + + E+ KE
Sbjct: 831 ---QIAVVAAEVAKNKESVNKAQEEVTKQKE 858
Score = 95 (38.5 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 31/135 (22%), Positives = 61/135 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSD 87
Query: 101 TKE--------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K+ + +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEVHDEITVTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLL 167
R+ + + P + L
Sbjct: 148 GRITKVLNMKPPEFL 162
Score = 83 (34.3 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 52/243 (21%), Positives = 111/243 (45%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREME---NHINLRKRKLE--SIEKEDD 698
+Q E R+ E+E L++E + N + ++ +++ E +L + KL+ S K+ +
Sbjct: 662 VQDELRIKENELQALEEELAHLKNTAEKYRQLKQQWEMKTEEADLLQTKLQQSSYHKQQE 721
Query: 699 INTALAKLVDQAADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHM----ASIEFD-AK 751
AL K+++++ + N ++ + E K ++E K + AE+ A + D AK
Sbjct: 722 ELDALKKIIEESEETLKNTKEIQKKAEEKYEVLEN-KMKNAEAERERELKDAQRKLDSAK 780
Query: 752 IRELEFNLKQHEKLA-LQA-SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFL 809
+ + K EK ++A +L E+ K+E C + L E+I ++
Sbjct: 781 TKADASSKKMKEKQQEVEAITLELEELKREHASCEQQLEAVN---EAIKSYEGQIAVVAA 837
Query: 810 EMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLA 869
E+ E + A Q+ +++ + NI+ + + E K++ ++ +LK +
Sbjct: 838 EVAKNKESVNKA-QEEVTKQKEVITAQDNIV-----KAKYAEVAKHKEQNNEYQLK--IK 889
Query: 870 EID 872
E+D
Sbjct: 890 ELD 892
Score = 55 (24.4 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E +K R+ E LE V+ +K+KL + +MKK Y
Sbjct: 415 ELKTKQTEVKKMDSGYRKDQEALEAVKKLKEKL---EAEMKKLNY 456
Score = 55 (24.4 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 15/61 (24%), Positives = 33/61 (54%)
Query: 376 SQILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA 432
+ +L+ +Q + Q+ E + KI+ +++ TL+ + K E+K L + ++N+ A
Sbjct: 704 ADLLQTKLQQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEA 763
Query: 433 E 433
E
Sbjct: 764 E 764
Score = 55 (24.4 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 18/75 (24%), Positives = 40/75 (53%)
Query: 363 AYEPPHDKIEKLGSQILELGVQA--NQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDK 419
+Y ++++ L +I+E + N K +QK +EK + +NK+ + ++R ++++D
Sbjct: 715 SYHKQQEELDAL-KKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAE-AERERELKDA 772
Query: 420 NNKLLHALRNSGAEN 434
KL A + A +
Sbjct: 773 QRKLDSAKTKADASS 787
Score = 47 (21.6 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 387 QKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 438
+K L+K+ E K L + +++ +D L +++ +NK AL + A+ F A
Sbjct: 317 RKELEKNMVEDSKTLAAKEKEVKKITDGLNALQEASNKDAEAL--AAAQQHFNA 368
Score = 46 (21.3 bits), Expect = 4.5e-13, Sum P(4) = 4.5e-13
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 497 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 547
K+ FD+ N S E+ RKE + E+ + L + + ++ D +A++E
Sbjct: 298 KSQSAFDLKKKNLASEENKRKELEKNMVEDSKTLAAKEKEVKKITDGLNALQE 350
Score = 42 (19.8 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 15/37 (40%), Positives = 17/37 (45%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVE 222
+VE S L E VK+ D LN AL KD E
Sbjct: 324 MVEDSKTLAAKEKEVKKITDGLN---ALQEASNKDAE 357
Score = 42 (19.8 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 13/75 (17%), Positives = 32/75 (42%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESM 237
Q +Q + ++ +L ++ ++ + +TL K + + E+ E + + + E
Sbjct: 708 QTKLQQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAERER 767
Query: 238 KKKLPWLKYDMKKAE 252
+ K K D K +
Sbjct: 768 ELKDAQRKLDSAKTK 782
Score = 41 (19.5 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 186 LVEKSSK-LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
++E+S + LK + K+ + L+ N + + ER R+ + K++S K K
Sbjct: 729 IIEESEETLKNTKEIQKKAEEKYEVLE--NKMKNAEAERERELKDAQRKLDSAKTKADAS 786
Query: 245 KYDMKKAE 252
MK+ +
Sbjct: 787 SKKMKEKQ 794
Score = 39 (18.8 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 427 LRNSGAENIFEAYCWL 442
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
Score = 38 (18.4 bits), Expect = 4.5e-13, Sum P(4) = 4.5e-13
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 405 TLRQCSDRLKDMEDKNNKL 423
T + ++ LK+M+DK KL
Sbjct: 241 TKERSAEELKEMQDKILKL 259
>UNIPROTKB|E2R7R8 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9615 "Canis lupus familiaris" [GO:0051383 "kinetochore
organization" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:AAEX03008008 Ensembl:ENSCAFT00000004208 Uniprot:E2R7R8
Length = 1191
Score = 156 (60.0 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 69/341 (20%), Positives = 146/341 (42%)
Query: 653 DEAAKLQKEREEIINIVQIEKRK-RREMENHINLRKRKLESIEK-EDDINTALAKLVDQA 710
D ++K KE+++ + + +E + +RE ++ + E+I+ E I ++
Sbjct: 806 DASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYEVQIEAMAVEVAKNK 865
Query: 711 ADLNIQQFKYAIEIKNLLVE--IVSCKWSYAEKHMA-SIEFDAKIRELEFNLKQHEKLAL 767
+N Q + + + ++ + ++ K++ H + + KI+EL+ N+ +H++ A
Sbjct: 866 ESVNKAQEEVTKQKEVIIAQDNVIKAKYAEVAVHKEQNNDSQLKIKELDHNISKHKREAE 925
Query: 768 QASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 825
A+ K+ + + KHL A P KE + ++E++ + N
Sbjct: 926 DAASKVSKMLKDYDWINAEKHLFGQPNSAYDFKTNNP---KEAGQRLQKLQEMKEKLGRN 982
Query: 826 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 885
++ N+L E E R DL K+ + + + LA I+ L +K L
Sbjct: 983 VNMRA------MNVLTEAEERYN---DLMKKKRIVENDKSKILATIEDLDQKKNQALNIA 1033
Query: 886 VAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGER 945
++N+ F F + L E G+ KV + + E L+ SGG+R
Sbjct: 1034 WQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELSGGQR 1090
Query: 946 SVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
S+ + ++S+ P ++DE++ +D + + + Q L
Sbjct: 1091 SLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 124 (48.7 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 43/184 (23%), Positives = 84/184 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSD 87
Query: 101 TKE--------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K+ + +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEVHDEITVTRQVVIGGRNKYLINGVNANNSRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA----LVEKSSKLKTIECTVKRN-GDTL 207
R+ + + P ++L E+A G + A + +K +KLK I+ ++ T+
Sbjct: 148 GRITKVLNMKPPEILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTI 207
Query: 208 NQLK 211
+LK
Sbjct: 208 QKLK 211
Score = 64 (27.6 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 46/237 (19%), Positives = 93/237 (39%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
+Q E R+ E+E L +E + N + K R+++ ++ E+ D + T L
Sbjct: 684 VQDELRIKENELQSLDEELAGLKNTAE----KYRQLKQQWEMKT------EEADLLQTKL 733
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
+ + K IE ++ AE+ +E K E E + E
Sbjct: 734 QQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAE---RDRE 790
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
Q L + K + + K + + +++ E+I EL++E +E + AI+
Sbjct: 791 LKDAQKKLDF--AKTKADASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIK 848
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQE---ADKKELKRFLAEIDALKEK 877
Q ++ + + E + E+++ ++E A +K AE+ KE+
Sbjct: 849 SYEVQIEAMAV---EVAKNKESVNKAQEEVTKQKEVIIAQDNVIKAKYAEVAVHKEQ 902
Score = 62 (26.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 60/253 (23%), Positives = 116/253 (45%)
Query: 650 LIEDEAAKLQKEREEIIN-IVQIEKRKRREMENHINLRKRKLESIEKEDD--INTALAKL 706
L ED + +E +E+ + +V++++ K E + I ++E +EK D I L L
Sbjct: 241 LAEDTKERSAEELKEMQDKVVKLQE-KLSENDKKIKALSHEIEELEKGKDKEIGGKLRSL 299
Query: 707 VDQAAD---LNIQ-QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
D A+ +N + Q + ++ KNL E K + EK+M IE D+ R L K+
Sbjct: 300 EDALAEAQRVNTKSQSAFDLKKKNLASE--ENKRTELEKNM--IE-DS--RTLAAKEKEV 352
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
+K+ + E K+ E L+ A++ +++ E + E T+ A
Sbjct: 353 KKITDGLNALQEASNKDAEA----LAAAQQHFNAVSAGLSSNE-DGAE--ATLAGQMMAC 405
Query: 823 QDNISQANSIFFLNQNIL----QEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
+++IS+A + Q L QE + +Q +++ + + D++ L+ + LKEK
Sbjct: 406 KNDISKAQTEAKQAQMKLKHAQQELKTKQAEVKKMDSGYRKDQEALEA----VKKLKEKL 461
Query: 879 LPTLRNLVAQINE 891
++ L + N+
Sbjct: 462 EAEMKKLNYEENK 474
Score = 62 (26.9 bits), Expect = 0.00019, Sum P(4) = 0.00019
Identities = 47/168 (27%), Positives = 76/168 (45%)
Query: 645 QTEQRLIEDEAAKLQKERE--EI---INIVQIEKRKRREM----ENHINLRKRKLESIEK 695
+ E+ +IED KE+E +I +N +Q K E + H N L S
Sbjct: 333 ELEKNMIEDSRTLAAKEKEVKKITDGLNALQEASNKDAEALAAAQQHFNAVSAGLSS--N 390
Query: 696 EDDINTALA-KLVDQAADLNIQQF--KYA-IEIKNLLVEIVSCKWSYAEKHMASIEFDAK 751
ED LA +++ D++ Q K A +++K+ E+ + K + +K + D +
Sbjct: 391 EDGAEATLAGQMMACKNDISKAQTEAKQAQMKLKHAQQELKT-KQAEVKKMDSGYRKDQE 449
Query: 752 IRELEFNLKQHEKL-ALQASLHYEDCKKE-VEHCRKHLS-DAKRQAES 796
E LK EKL A L+YE+ K+E + R+ LS D R E+
Sbjct: 450 ALEAVKKLK--EKLEAEMKKLNYEENKEEGLLEKRRQLSRDISRLKET 495
Score = 59 (25.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 30/115 (26%), Positives = 52/115 (45%)
Query: 805 EKEFLEMPTTIEE-LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 863
E + E+ T +EE + IQ + + S + Q I++E EH R D KE
Sbjct: 189 EAKLKEIKTILEEEITPTIQ-KLKEERSSYLEYQKIMREIEHLSRLYIAYQFLLAEDTKE 247
Query: 864 LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM-AVAGEVSLDEHESDFDK 917
R E+ +++K V ++ E S N +++ A++ E+ +E E DK
Sbjct: 248 --RSAEELKEMQDK--------VVKLQEKLSENDKKIKALSHEI--EELEKGKDK 290
Score = 57 (25.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 42/208 (20%), Positives = 92/208 (44%)
Query: 675 KRREMENHINLRKRKLESIEK--EDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIV 732
K+ + I ++ KL+ I+ E++I + KL ++ + ++ K EI++L +
Sbjct: 177 KKIAAQKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSY-LEYQKIMREIEHLSRLYI 235
Query: 733 SCKWSYAE--KHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCKK----EVEHC 783
+ ++ AE K ++ E K+ +L+ L +++K S E+ +K E+
Sbjct: 236 AYQFLLAEDTKERSAEELKEMQDKVVKLQEKLSENDKKIKALSHEIEELEKGKDKEIGGK 295
Query: 784 RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI-SQANSIFFLNQNILQE 842
+ L DA +A+ + + + F +++ A ++N ++ + L
Sbjct: 296 LRSLEDALAEAQRV---NTKSQSAF-----DLKKKNLASEENKRTELEKNMIEDSRTLAA 347
Query: 843 YEHRQRQIED-LSTKQEADKKELKRFLA 869
E ++I D L+ QEA K+ + A
Sbjct: 348 KEKEVKKITDGLNALQEASNKDAEALAA 375
Score = 55 (24.4 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E +K R+ E LE V+ +K+KL + +MKK Y
Sbjct: 429 ELKTKQAEVKKMDSGYRKDQEALEAVKKLKEKL---EAEMKKLNY 470
Score = 55 (24.4 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 34/140 (24%), Positives = 65/140 (46%)
Query: 363 AYEPPHDKIEKLGSQILELG-VQANQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKN 420
+Y ++++ L I E N K +QK +EK + +NK+ + ++R ++++D
Sbjct: 737 SYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEVLENKMKNAE-AERDRELKDAQ 795
Query: 421 NKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLE--DHVGH 478
KL A + A + +++ + E+ EA + LE+ R H +Y + + V
Sbjct: 796 KKLDFAKTKADASSKK-----MKEKQQEV--EA---ITLELEELKREHTSYKQQLEAVNE 845
Query: 479 YIWKSFITQDAGDRDFLAKN 498
I KS+ Q +AKN
Sbjct: 846 AI-KSYEVQIEAMAVEVAKN 864
Score = 50 (22.7 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 14/61 (22%), Positives = 32/61 (52%)
Query: 376 SQILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA 432
+ +L+ +Q + Q+ E + K + +++ TL+ + K E+K L + ++N+ A
Sbjct: 726 ADLLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEA 785
Query: 433 E 433
E
Sbjct: 786 E 786
Score = 49 (22.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 15/73 (20%), Positives = 36/73 (49%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQR-----AELLE 232
Q +Q + ++ +L ++ T++ + +TL K + + E+ E + + AE
Sbjct: 730 QTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAERDR 789
Query: 233 KVESMKKKLPWLK 245
+++ +KKL + K
Sbjct: 790 ELKDAQKKLDFAK 802
Score = 48 (22.0 bits), Expect = 0.00019, Sum P(4) = 0.00019
Identities = 33/186 (17%), Positives = 73/186 (39%)
Query: 804 LEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 863
L++E + T E+ Q + L + Q H+Q++ D K + +E
Sbjct: 698 LDEELAGLKNTAEKYRQLKQQWEMKTEEADLLQTKLQQSSYHKQQEELDALKKTIEESEE 757
Query: 864 LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIK 923
+ EI E+ L N + R ++ + LD ++ D +K
Sbjct: 758 TLKNTKEIQKKAEEKYEVLENKMKNAEAERDRELKD----AQKKLDFAKTKADASSKKMK 813
Query: 924 VKFRQ----SGQLEVLSAHHQSGGER--SVSTIL--YLVSLQDLTNCPFRVVDEINQGMD 975
K ++ + +LE L H S ++ +V+ + Y V ++ + + + +N+ +
Sbjct: 814 EKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYEVQIEAMAVEVAKNKESVNKAQE 873
Query: 976 PINERK 981
+ ++K
Sbjct: 874 EVTKQK 879
Score = 45 (20.9 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 22/98 (22%), Positives = 45/98 (45%)
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
AKL +K + E E +L + + +E ++ IE + R L A + + E
Sbjct: 190 AKLKEIKTILEEEITPTIQKLKEERSSYLEYQKIMREIE-HLSRLYIAYQFLLAEDTK-E 247
Query: 219 KDVERVRQRAE----LLEKVESMKKKLPWLKYDMKKAE 252
+ E +++ + L EK+ KK+ L +++++ E
Sbjct: 248 RSAEELKEMQDKVVKLQEKLSENDKKIKALSHEIEELE 285
Score = 43 (20.2 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 497 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 547
K+ FD+ N S E+ R E + E+ R L + + ++ D +A++E
Sbjct: 312 KSQSAFDLKKKNLASEENKRTELEKNMIEDSRTLAAKEKEVKKITDGLNALQE 364
Score = 41 (19.5 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 381 LGVQANQK-RLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFE 437
L + N++ L+K+ E + L + +++ +D L +++ +NK AL + A+ F
Sbjct: 324 LASEENKRTELEKNMIEDSRTLAAKEKEVKKITDGLNALQEASNKDAEAL--AAAQQHFN 381
Query: 438 A 438
A
Sbjct: 382 A 382
Score = 40 (19.1 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVE 222
++E S L E VK+ D LN AL KD E
Sbjct: 338 MIEDSRTLAAKEKEVKKITDGLN---ALQEASNKDAE 371
Score = 39 (18.8 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 405 TLRQCSDRLKDMEDKNNKLLHAL 427
T + ++ LK+M+DK KL L
Sbjct: 245 TKERSAEELKEMQDKVVKLQEKL 267
Score = 39 (18.8 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 427 LRNSGAENIFEAYCWL 442
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
>DICTYBASE|DDB_G0284499 [details] [associations]
symbol:smc2 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA;ISS] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0284499 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0051301 GenomeReviews:CM000153_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 EMBL:AAFI02000066 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9
HSSP:P32908 OMA:CQNGKIP RefSeq:XP_638528.1
ProteinModelPortal:Q54PK4 STRING:Q54PK4 PRIDE:Q54PK4
EnsemblProtists:DDB0219933 GeneID:8624621 KEGG:ddi:DDB_G0284499
ProtClustDB:CLSZ2430256 Uniprot:Q54PK4
Length = 1184
Score = 158 (60.7 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 82/349 (23%), Positives = 156/349 (44%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKR---REMENHINLRKRKLESIEKEDDINTA-LAKL 706
++D K+Q +E+ I +I K ++ +++ I +LE++ KE N ++K+
Sbjct: 791 LKDLEKKIQITKEKCIKSNKIVKGEQVFIEKLDLEIQEMDNELENLSKETQGNQGTISKM 850
Query: 707 ---VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
VD A + K +I+ L EI K MA + DA IR L L++ +
Sbjct: 851 RKDVDTLARSISETNKQIQDIRETLSEI--------RKDMAQ-KNDA-IRSLHQELEKIQ 900
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAES-IAFIT-PELEKEFLEMPTTIEELEAA 821
+ + E K + K +A + E+ I T + EK+ P + + A
Sbjct: 901 SEITEIDMSTEKLKSRMNRVDKDRQEASKWLEAAIKKHTWIKNEKQLFNRPGSDFDFNAT 960
Query: 822 IQDNISQANSIFF------------LNQNILQEYEHRQRQIEDLSTKQ---EADKKELKR 866
+ S+ANS + +N+ ++ +E +++ ++L K+ E DK +++
Sbjct: 961 ---DPSKANSEYIKLQEEQEKLSKTINRKVMSMFEKAEQEYQELMEKKKIIENDKSKIEH 1017
Query: 867 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKF 926
+ E+D K + +LR ++N+ F F + L+ E + FG+ +KV F
Sbjct: 1018 VIRELDEKKNE---SLRTTWKKVNKDFGSIFSTLLPGTSAKLEPPEGQNELFGLEVKVAF 1074
Query: 927 RQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
+ E LS SGG++S+ + ++SL P ++DEI+ +D
Sbjct: 1075 GDVWK-ETLS--ELSGGQKSLLALSLILSLLLFKPAPMYILDEIDAALD 1120
Score = 128 (50.1 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG R S+ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFVLGISNLSQVRVDSLQELVYKKGQAGITKASVTITFNNSD 87
Query: 101 TKE-----EHL---TIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K+ EHL T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPAGYEHLDKITVTRQVAIGGRNKYLINGHNAQLSRVQDLFHSVQLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQ-HCAL--VEKSSKLKTIECT---VKRNGDT 206
R+ + + P ++L E+A G ++ + AL +EK K K E T + T
Sbjct: 148 GRITKVLNMKPPEILAMIEEAAGTRMFEMKKNSALNTIEKKQK-KVDEITKVLAEEITPT 206
Query: 207 LNQLKALNVEQEKD------VERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
L++L+ K ++R+ QR + + + +KKL +++ KAE
Sbjct: 207 LDKLRGERTSYMKFTNNQTLIDRL-QRFIIAYEYYTYEKKLESSEFESFKAE 257
Score = 85 (35.0 bits), Expect = 8.2e-10, Sum P(4) = 8.2e-10
Identities = 44/232 (18%), Positives = 100/232 (43%)
Query: 683 INLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK 741
+N R L + + + IN L +L D +Q + + IK +++ ++
Sbjct: 681 LNENNRCLRENQSQLEHINFELVQL-KSVTD-RFKQLEQQLNIKQHAASLIAQRFQLNPH 738
Query: 742 HMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 801
H +E I+E+E +++ +L + + ++ ++V+ ++D + ES
Sbjct: 739 HQL-LE---SIKEMEKSIESDTQLITNSMIKEKEALEKVKQLESQVNDFQSIRESQL--- 791
Query: 802 PELEKEFLEMPTTIEELEAAIQDN-ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEAD 860
+LEK+ I + E I+ N I + +F ++ E + ++E+LS + + +
Sbjct: 792 KDLEKKI-----QITK-EKCIKSNKIVKGEQVFIEKLDL--EIQEMDNELENLSKETQGN 843
Query: 861 KKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHE 912
+ + + ++D L T + + I ET S ++MA + H+
Sbjct: 844 QGTISKMRKDVDTLARSISETNKQ-IQDIRETLSEIRKDMAQKNDAIRSLHQ 894
Score = 85 (35.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 55/245 (22%), Positives = 121/245 (49%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRR---EMENHINLRKRKLESIEKEDDINTALAKLV 707
++ + ++L K+RE+ N+ ++++++++ E+ + K + ES++KE+ LA
Sbjct: 275 LKAKISELAKQREKETNLEEMDQQEQKLSKELVKYQTSHKHQKESLDKEEGAINNLANTR 334
Query: 708 DQAADLNIQQF---KYAIE--IKNLLVEI--VSCKWSYAE-KHMA-----SIEFD----A 750
++ +IQQ K ++E I++++ E ++ + + KH S D A
Sbjct: 335 EEIKQ-SIQQKQKEKQSMEKKIQSIVEENQQINAELKTLQNKHNTMTTGISTGADGSSAA 393
Query: 751 KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 810
+ L + +K A+ A+ Y+ + V+H + L AKR+A IT E + + +
Sbjct: 394 EDGSYTEQLMEAKKTAVNAASEYKQAEFRVKHLQSELI-AKRKA-----ITQE-QTDHKK 446
Query: 811 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 870
+ E +E IQ ++++ L+ + QE ++RQ+E L +K ++E+ A+
Sbjct: 447 LQAEQELVEREIQQ-LTRSIQELQLDNSKQQELTEKKRQLEPLVSKL---REEVGNASAQ 502
Query: 871 IDALK 875
+ L+
Sbjct: 503 LSGLE 507
Score = 76 (31.8 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 40/224 (17%), Positives = 93/224 (41%)
Query: 674 RKRREMENHINLRKRKLESI-------EKEDDINTALAKLVDQAADLNIQQFKYAIEIKN 726
R+ + HIN +L+S+ E++ +I A L+ Q LN + IK
Sbjct: 689 RENQSQLEHINFELVQLKSVTDRFKQLEQQLNIKQHAASLIAQRFQLN-PHHQLLESIKE 747
Query: 727 LLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKH 786
+ I S + E K+++LE + + + ++ L +D +K+++ ++
Sbjct: 748 MEKSIESDTQLITNSMIKEKEALEKVKQLESQVNDFQSIR-ESQL--KDLEKKIQITKEK 804
Query: 787 LSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHR 846
+ + + +L+ E EM +E L Q N + + + +
Sbjct: 805 CIKSNKIVKGEQVFIEKLDLEIQEMDNELENLSKETQGNQGTISKMRKDVDTLARSISET 864
Query: 847 QRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQIN 890
+QI+D+ +K++ + I +L ++ L +++ + +I+
Sbjct: 865 NKQIQDIRETLSEIRKDMAQKNDAIRSLHQE-LEKIQSEITEID 907
Score = 63 (27.2 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 28/110 (25%), Positives = 48/110 (43%)
Query: 201 KRNGD-TLNQ--LKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXX 257
KR D TL LKA E K E+ E+ ++ + + K+L +KY + +
Sbjct: 263 KRKKDLTLKSTDLKAKISELAKQREKETNLEEMDQQEQKLSKEL--VKY---QTSHKHQK 317
Query: 258 XXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
NT E + I+ K++EK ++ KK+ S++ EN +
Sbjct: 318 ESLDKEEGAINNLANTREEIKQSIQQKQKEKQSME---KKIQSIVEENQQ 364
Score = 62 (26.9 bits), Expect = 8.2e-10, Sum P(4) = 8.2e-10
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE--DDINT 701
+Q EQ L+E E +L + +E+ Q++ K++E+ +KR+LE + + +++
Sbjct: 447 LQAEQELVEREIQQLTRSIQEL----QLDNSKQQELTE----KKRQLEPLVSKLREEVGN 498
Query: 702 ALAKL 706
A A+L
Sbjct: 499 ASAQL 503
Score = 54 (24.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/57 (21%), Positives = 33/57 (57%)
Query: 369 DKIEK-LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
+K+ K + +++ + +A Q+ + EK+KI+ +K + ++++++K N+ L
Sbjct: 977 EKLSKTINRKVMSMFEKAEQEYQELMEKKKIIENDKSKIEHV---IRELDEKKNESL 1030
Score = 53 (23.7 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 15/57 (26%), Positives = 32/57 (56%)
Query: 379 LELGVQANQKRLQKSEK--EKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
++ +Q QK Q EK + I+ +N+ Q + LK +++K+N + + ++GA+
Sbjct: 337 IKQSIQQKQKEKQSMEKKIQSIVEENQ----QINAELKTLQNKHNTMTTGI-STGAD 388
Score = 51 (23.0 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 369 DKIEKLGSQI----LELGVQANQKRLQKSEKEKILNQNKLT-LRQCSDRLKDMEDKNNKL 423
+KI K G Q+ L+L +Q L+ KE NQ ++ +R+ D L + NK
Sbjct: 809 NKIVK-GEQVFIEKLDLEIQEMDNELENLSKETQGNQGTISKMRKDVDTLARSISETNKQ 867
Query: 424 LHALRNSGAE 433
+ +R + +E
Sbjct: 868 IQDIRETLSE 877
Score = 48 (22.0 bits), Expect = 5.1e-15, Sum P(3) = 5.1e-15
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
+QI L R +S+ E I N + L+ +DR K +E + N HA
Sbjct: 676 TQIQRLNENNRCLRENQSQLEHI-NFELVQLKSVTDRFKQLEQQLNIKQHA 725
Score = 41 (19.5 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 38 ICKPGSRLNLVIGPNGSGKSSL 59
IC G N+VI + +GK+ L
Sbjct: 543 ICASGKLYNIVIEDDETGKALL 564
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 418 DKNNKLLHALRNSGAENIFEAYCWL 442
D + L SG NI ++ C++
Sbjct: 24 DPTFNAITGLNGSGKSNILDSICFV 48
>MGI|MGI:106067 [details] [associations]
symbol:Smc2 "structural maintenance of chromosomes 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000228 "nuclear chromosome" evidence=ISO]
[GO:0000793 "condensed chromosome" evidence=ISO;IDA] [GO:0000796
"condensin complex" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=ISO] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051276 "chromosome organization" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0051383 "kinetochore
organization" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 MGI:MGI:106067 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0006281 EMBL:CH466565
GO:GO:0006310 GO:GO:0045132 GO:GO:0000793 GO:GO:0007076
GO:GO:0051383 GO:GO:0000228 GO:GO:0000796 GO:GO:0010032
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
OMA:CQNGKIP CTD:10592 HOVERGEN:HBG106605 OrthoDB:EOG49S65K
EMBL:AJ534939 EMBL:AK013109 EMBL:AK019977 EMBL:AL732619
EMBL:BC094380 EMBL:U42385 IPI:IPI00987134 RefSeq:NP_032043.3
UniGene:Mm.2999 PDB:3L51 PDBsum:3L51 ProteinModelPortal:Q8CG48
SMR:Q8CG48 IntAct:Q8CG48 STRING:Q8CG48 PhosphoSite:Q8CG48
PaxDb:Q8CG48 PRIDE:Q8CG48 Ensembl:ENSMUST00000102915
Ensembl:ENSMUST00000117280 GeneID:14211 KEGG:mmu:14211
InParanoid:Q52KE9 EvolutionaryTrace:Q8CG48 NextBio:285461
Bgee:Q8CG48 CleanEx:MM_SMC2 Genevestigator:Q8CG48
GermOnline:ENSMUSG00000028312 Uniprot:Q8CG48
Length = 1191
Score = 154 (59.3 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 74/343 (21%), Positives = 146/343 (42%)
Query: 653 DEAAKLQKEREEIINIV--QIEKRKRREMENHINLRKRKLESIEK-EDDINTALAKLVDQ 709
D ++K KE+++ + + ++E+ KR N L E+I+ E I A++
Sbjct: 806 DASSKKMKEKQQEVEAITLELEELKREHASNEQQLDAVN-EAIKAYEGQIEKMAAEVAKN 864
Query: 710 AADLNIQQFKYAIEIKNLLV---EIVSCKWSYAEKH-MASIEFDAKIRELEFNLKQHEKL 765
+N Q + ++ K ++ I+ K + KH + + E KI+EL+ ++ +H++
Sbjct: 865 KESVNKAQDEL-MKQKQIITAQDNIIKDKCAEVAKHNLQNNESQLKIKELDHSISKHKRE 923
Query: 766 ALQASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
A A+ + + + KHL A P KE + ++E++ +
Sbjct: 924 ADDAAAKVSKMLSDYDWINAEKHLFGQPNSAYDFKTNNP---KEAGQRLQKLQEVKEKLG 980
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 883
N++ N+L E E R DL K+ + + + LA I+ L +K L
Sbjct: 981 RNVN------LRAMNVLTEAEERYN---DLMKKKRIVENDKSKILATIEDLDQKKNQALN 1031
Query: 884 NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGG 943
++N+ F F + L E G+ KV + + E L+ SGG
Sbjct: 1032 IAWQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELSGG 1088
Query: 944 ERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
+RS+ + ++S+ P ++DE++ +D + + + Q L
Sbjct: 1089 QRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 123 (48.4 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 45/184 (24%), Positives = 84/184 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSD 87
Query: 101 TK------EEH--LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K E H +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEAHDEITVTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA----LVEKSSKLKTIECTVKRN-GDTL 207
R+ + + P ++L E+A G + A + +K +KLK I+ ++ T+
Sbjct: 148 GRITKVLNMKPPEILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTI 207
Query: 208 NQLK 211
+LK
Sbjct: 208 QKLK 211
Score = 101 (40.6 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 51/235 (21%), Positives = 108/235 (45%)
Query: 677 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 736
+++++ + ++ +L ++E+E LA L + A +Q K E+K +++ K
Sbjct: 682 KDVQDELRTKENELRALEEE------LAGLKNVAE--KYRQLKQQWEMKTEEGDLLQTKL 733
Query: 737 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR----KHLSD 789
+ H E DA I E E LK +++ +A YE + ++++ K L D
Sbjct: 734 QQSSYHKQQEELDALKKTIEESEETLKSTKEIQKKAEEKYEALENKMKNAEAEREKELKD 793
Query: 790 AKRQAESIAFITPELEKEFLEMPTTIE----ELEAAIQDNISQANSIFFLNQNILQEYEH 845
A+++ + K+ E +E ELE +++ S + +N+ I + YE
Sbjct: 794 AQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELKREHASNEQQLDAVNEAI-KAYEG 852
Query: 846 RQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR-NLVA-QINETFSRNFQ 898
QIE ++ + +K+ + + A+ + +K+K + T + N++ + E N Q
Sbjct: 853 ---QIEKMAAEVAKNKESVNK--AQDELMKQKQIITAQDNIIKDKCAEVAKHNLQ 902
Score = 81 (33.6 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 52/215 (24%), Positives = 97/215 (45%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI---NLRKRKLE--SIEKEDD 698
+Q E R E+E L++E + N+ + ++ +++ E +L + KL+ S K+ +
Sbjct: 684 VQDELRTKENELRALEEELAGLKNVAEKYRQLKQQWEMKTEEGDLLQTKLQQSSYHKQQE 743
Query: 699 INTALAKLVDQAADL-----NIQ---QFKY-AIE--IKNLLVEIVSCKWSYAEKHMASIE 747
AL K ++++ + IQ + KY A+E +KN E + A+K + +
Sbjct: 744 ELDALKKTIEESEETLKSTKEIQKKAEEKYEALENKMKNAEAEREK-ELKDAQKKLDCAK 802
Query: 748 FDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE 807
A + KQ E A+ +L E+ K+E + L DA +A I ++EK
Sbjct: 803 TKADASSKKMKEKQQEVEAI--TLELEELKREHASNEQQL-DAVNEA--IKAYEGQIEKM 857
Query: 808 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 842
E+ E + A QD + + I NI+++
Sbjct: 858 AAEVAKNKESVNKA-QDELMKQKQIITAQDNIIKD 891
Score = 63 (27.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA--LAKLVDQ 709
E A +L++ +++I+N+ ++ E E I ++E +E+ D T L L D
Sbjct: 247 ERSAGELKEMQDKIVNLQEVLS----ENEKKIKALNCEIEELERRKDKETGGKLKSLEDA 302
Query: 710 AAD---LNIQ-QFKYAIEIKNLLVEIVSCKW---SYAE--KHMASIEFDAK-----IREL 755
A+ +N + Q + ++ KNL E K S AE K +A+ E + K + L
Sbjct: 303 CAEAQRVNTKSQSAFDLKKKNLASEETKRKELQNSMAEDSKALAAKEKEVKKITDGLHGL 362
Query: 756 -EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT 814
E + K E LA A H+ + + ++A + IA ++ K E
Sbjct: 363 QEASNKDAEALAA-AQQHFNAVSAGLSS-NEDGAEATLAGQMIA-CKNDISKAQTEAKQA 419
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
+L+ A Q+ S+ + ++ Y+ Q E + +E + E+K+ E +
Sbjct: 420 QMKLKHAQQELKSKQAEVKKMDSG----YKKDQDAFEAVKKAKEKLETEMKKLNYE-ENK 474
Query: 875 KEKWLPTLRNLVAQIN 890
+EK L R L IN
Sbjct: 475 EEKLLEKHRQLSRDIN 490
Score = 60 (26.2 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 30/165 (18%), Positives = 68/165 (41%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
Y+ D E + +L + + +++++EK+L ++ RQ S + +++ K+ L
Sbjct: 444 YKKDQDAFEAVKKAKEKLETEMKKLNYEENKEEKLLEKH----RQLSRDINNLKGKHEAL 499
Query: 424 LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKS 483
L N + + ++ G V +NV + + A LE G ++
Sbjct: 500 LAKFPNL-------QFAYKDPEKNWNRNSVKGLVASLINVKDNSTATALEVVAGERLYNV 552
Query: 484 FITQDAGDRDFLAKN-LKP-FDVPILNYVSNESSRKEPFQISEEM 526
+ + + L K LK + + LN +S E ++++ +
Sbjct: 553 VVDTEVTAKKLLEKGELKRRYTIIPLNKISARCIAPETLRVAQNL 597
Score = 59 (25.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 805 EKEFLEMPTTIEE-LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 863
E + E+ T +EE + IQ + + S + Q +++E EH R + D KE
Sbjct: 189 EAKLKEIKTILEEEITPTIQ-KLKEERSSYLEYQKVMREIEHLSRLYIAYQFLRAEDTKE 247
Query: 864 LKRFLAEIDALKEKWLPTLRNLVAQINE 891
R E+ +++K + L+ ++++ NE
Sbjct: 248 --RSAGELKEMQDK-IVNLQEVLSE-NE 271
Score = 56 (24.8 bits), Expect = 6.8e-15, Sum P(3) = 6.8e-15
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 497 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 547
K+ FD+ N S E+ RKE ++E+ +AL + + ++ D H ++E
Sbjct: 312 KSQSAFDLKKKNLASEETKRKELQNSMAEDSKALAAKEKEVKKITDGLHGLQE 364
Score = 54 (24.1 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 44/191 (23%), Positives = 81/191 (42%)
Query: 672 EKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVE 730
E+ KR+E++N + + L + EKE I L L +A++ + + A + N +
Sbjct: 327 EETKRKELQNSMAEDSKALAAKEKEVKKITDGLHGL-QEASNKDAEALAAAQQHFNAVSA 385
Query: 731 IVSCKWSYAEKHMASIEFDAK--IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLS 788
+S AE +A K I + + KQ + A ++ K + +K S
Sbjct: 386 GLSSNEDGAEATLAGQMIACKNDISKAQTEAKQAQMKLKHAQ---QELKSKQAEVKKMDS 442
Query: 789 DAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQR 848
K+ + AF + KE LE T +++L ++N + +L+++ R
Sbjct: 443 GYKKDQD--AFEAVKKAKEKLE--TEMKKLN--YEEN---------KEEKLLEKHRQLSR 487
Query: 849 QIEDLSTKQEA 859
I +L K EA
Sbjct: 488 DINNLKGKHEA 498
Score = 52 (23.4 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 20/92 (21%), Positives = 43/92 (46%)
Query: 160 KLSPVKLLEETEKAVGDP-QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
K +K E + GD Q +Q + ++ +L ++ T++ + +TL K + + E
Sbjct: 711 KYRQLKQQWEMKTEEGDLLQTKLQQSSYHKQQEELDALKKTIEESEETLKSTKEIQKKAE 770
Query: 219 KDVERVRQR-----AELLEKVESMKKKLPWLK 245
+ E + + AE ++++ +KKL K
Sbjct: 771 EKYEALENKMKNAEAEREKELKDAQKKLDCAK 802
Score = 50 (22.7 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 384 QANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 438
+ +K LQ S E K L + +++ +D L +++ +NK AL + A+ F A
Sbjct: 328 ETKRKELQNSMAEDSKALAAKEKEVKKITDGLHGLQEASNKDAEAL--AAAQQHFNA 382
Score = 50 (22.7 bits), Expect = 4.2e-14, Sum P(4) = 4.2e-14
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 378 ILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
+L+ +Q + Q+ E + K + +++ TL+ + K E+K L + ++N+ AE
Sbjct: 728 LLQTKLQQSSYHKQQEELDALKKTIEESEETLKSTKEIQKKAEEKYEALENKMKNAEAE 786
Score = 49 (22.3 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 15/74 (20%), Positives = 37/74 (50%)
Query: 178 QLPVQHCA--LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVR----QRAELL 231
Q+ ++H L K +++K ++ K++ D +K + E +++++ + +LL
Sbjct: 420 QMKLKHAQQELKSKQAEVKKMDSGYKKDQDAFEAVKKAKEKLETEMKKLNYEENKEEKLL 479
Query: 232 EKVESMKKKLPWLK 245
EK + + + LK
Sbjct: 480 EKHRQLSRDINNLK 493
Score = 48 (22.0 bits), Expect = 6.6e-14, Sum P(4) = 6.6e-14
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 363 AYEPPHDKIEKLGSQILELG-VQANQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKN 420
+Y ++++ L I E + K +QK +EK +NK+ + ++R K+++D
Sbjct: 737 SYHKQQEELDALKKTIEESEETLKSTKEIQKKAEEKYEALENKMKNAE-AEREKELKDAQ 795
Query: 421 NKL 423
KL
Sbjct: 796 KKL 798
Score = 43 (20.2 bits), Expect = 4.2e-14, Sum P(4) = 4.2e-14
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK+ E +K ++ + E V+ K+KL + +MKK Y
Sbjct: 429 ELKSKQAEVKKMDSGYKKDQDAFEAVKKAKEKL---ETEMKKLNY 470
Score = 39 (18.8 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 427 LRNSGAENIFEAYCWL 442
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
>UNIPROTKB|I3LM67 [details] [associations]
symbol:LOC100738089 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA]
InterPro:IPR027131 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:CU915560
Ensembl:ENSSSCT00000022526 OMA:GTHPNTL Uniprot:I3LM67
Length = 131
Score = 203 (76.5 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 37/80 (46%), Positives = 53/80 (66%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G +GRA
Sbjct: 52 FVEGSIVRIAMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRA 111
Query: 78 TSIGAYVKRGEESGYIKISL 97
+G +VKRG G ++I L
Sbjct: 112 DKVGFFVKRGCSKGMVEIEL 131
>UNIPROTKB|O95347 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein
2" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0010032 "meiotic chromosome condensation"
evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0051383 "kinetochore organization" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0007076 "mitotic chromosome condensation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000793
"condensed chromosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
Reactome:REACT_115566 Reactome:REACT_21300
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0051301 GO:GO:0006281
GO:GO:0006310 EMBL:CH471105 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06674 PANTHER:PTHR18937:SF9 HOGENOM:HOG000228249 OMA:CQNGKIP
CTD:10592 HOVERGEN:HBG106605 EMBL:AF092563 EMBL:AL833191
EMBL:AL161791 EMBL:AL354938 EMBL:BC130385 EMBL:AF113673
EMBL:BN000163 IPI:IPI00007927 IPI:IPI00232806 RefSeq:NP_001036015.1
RefSeq:NP_001036016.1 RefSeq:NP_001252531.1 RefSeq:NP_006435.2
UniGene:Hs.119023 ProteinModelPortal:O95347 SMR:O95347
DIP:DIP-35422N IntAct:O95347 MINT:MINT-1161754 STRING:O95347
PhosphoSite:O95347 PaxDb:O95347 PRIDE:O95347
Ensembl:ENST00000286398 Ensembl:ENST00000303219
Ensembl:ENST00000374787 Ensembl:ENST00000374793
Ensembl:ENST00000493955 GeneID:10592 KEGG:hsa:10592 UCSC:uc004bbv.3
GeneCards:GC09P106856 H-InvDB:HIX0008250 HGNC:HGNC:14011 MIM:605576
neXtProt:NX_O95347 PharmGKB:PA37833 InParanoid:O95347
OrthoDB:EOG49S65K ChiTaRS:SMC2 GenomeRNAi:10592 NextBio:40225
ArrayExpress:O95347 Bgee:O95347 CleanEx:HS_SMC2
Genevestigator:O95347 GermOnline:ENSG00000136824 Uniprot:O95347
Length = 1197
Score = 158 (60.7 bits), Expect = 5.1e-15, Sum P(4) = 5.1e-15
Identities = 71/341 (20%), Positives = 144/341 (42%)
Query: 653 DEAAKLQKEREEIINIVQIEKRK-RREMENHINLRKRKLESIEK-EDDINTALAKLVDQA 710
D ++K KE+++ + + +E + +RE ++ + E+I+ E I A++
Sbjct: 806 DASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYESQIEVMAAEVAKNK 865
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAE--KHMA-SIEFDAKIRELEFNLKQHEKLAL 767
+N Q + + + + + K YAE KH + + KI+EL+ N+ +H++ A
Sbjct: 866 ESVNKAQEEVTKQKEVITAQDTVIKAKYAEVAKHKEQNNDSQLKIKELDHNISKHKREAE 925
Query: 768 QASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 825
+ K+ + + +HL A P KE + ++E++ + N
Sbjct: 926 DGAAKVSKMLKDYDWINAERHLFGQPNSAYDFKTNNP---KEAGQRLQKLQEMKEKLGRN 982
Query: 826 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 885
++ N+L E E R DL K+ + + + L I+ L +K L
Sbjct: 983 VNMRA------MNVLTEAEERYN---DLMKKKRIVENDKSKILTTIEDLDQKKNQALNIA 1033
Query: 886 VAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGER 945
++N+ F F + L E G+ KV + + E L+ SGG+R
Sbjct: 1034 WQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELSGGQR 1090
Query: 946 SVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
S+ + ++S+ P ++DE++ +D + + + Q L
Sbjct: 1091 SLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 122 (48.0 bits), Expect = 5.1e-15, Sum P(4) = 5.1e-15
Identities = 43/184 (23%), Positives = 84/184 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSD 87
Query: 101 TKE--------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K+ + +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEVHDEITVTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA----LVEKSSKLKTIECTVKRN-GDTL 207
R+ + + P ++L E+A G + A + +K +KLK I+ ++ T+
Sbjct: 148 GRITKVLNMKPPEILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTI 207
Query: 208 NQLK 211
+LK
Sbjct: 208 QKLK 211
Score = 101 (40.6 bits), Expect = 6.9e-09, Sum P(3) = 6.9e-09
Identities = 50/252 (19%), Positives = 113/252 (44%)
Query: 677 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 736
+++++ + +++ +L ++E+E LA L + A +Q K E+K +++ K
Sbjct: 682 KDVQDELRIKENELRALEEE------LAGLKNTAE--KYRQLKQQWEMKTEEADLLQTKL 733
Query: 737 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR----KHLSD 789
+ H E DA I E E LK +++ +A YE + ++++ + L D
Sbjct: 734 QQSSYHKQQEELDALKKTIEESEETLKNTKEIQRKAEEKYEVLENKMKNAEAERERELKD 793
Query: 790 AKRQAESIAFITPELEKEFLEMPTTIE----ELEAAIQDNISQANSIFFLNQNILQEYEH 845
A+++ + K+ E +E ELE +++ S + +N+ I + YE
Sbjct: 794 AQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAI-KSYES 852
Query: 846 RQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGE 905
QIE ++ + +K+ + + A+ + K+K + T ++ V + +E +
Sbjct: 853 ---QIEVMAAEVAKNKESVNK--AQEEVTKQKEVITAQDTVIKAKYAEVAKHKEQNNDSQ 907
Query: 906 VSLDEHESDFDK 917
+ + E + + K
Sbjct: 908 LKIKELDHNISK 919
Score = 89 (36.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 54/299 (18%), Positives = 128/299 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREME---NHINLRKRKLE--SIEKEDD 698
+Q E R+ E+E L++E + N + ++ +++ E +L + KL+ S K+ +
Sbjct: 684 VQDELRIKENELRALEEELAGLKNTAEKYRQLKQQWEMKTEEADLLQTKLQQSSYHKQQE 743
Query: 699 INTALAKLVDQAADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 756
AL K ++++ + N ++ + E K ++E K + AE+ + K+ +
Sbjct: 744 ELDALKKTIEESEETLKNTKEIQRKAEEKYEVLEN-KMKNAEAERERELKDAQKKLDCAK 802
Query: 757 FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 816
K + E E+E ++ + K+Q E++ E + M +
Sbjct: 803 TKADASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYESQIEVMAAEVA 862
Query: 817 ELEAAI---QDNISQANSIFFLNQNILQ-EY----EHRQR------QIEDLSTKQEADKK 862
+ + ++ Q+ +++ + +++ +Y +H+++ +I++L K+
Sbjct: 863 KNKESVNKAQEEVTKQKEVITAQDTVIKAKYAEVAKHKEQNNDSQLKIKELDHNISKHKR 922
Query: 863 ELKRFLAEIDA-LKE-KWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFG 919
E + A++ LK+ W+ R+L Q N + AG+ L + + +K G
Sbjct: 923 EAEDGAAKVSKMLKDYDWINAERHLFGQPNSAYDFKTNNPKEAGQ-RLQKLQEMKEKLG 980
Score = 64 (27.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 58/255 (22%), Positives = 115/255 (45%)
Query: 650 LIEDEAAKLQKEREEIIN-IVQIEKRKRREMENHINLRKRKLESIEKEDDINTA--LAKL 706
L ED + +E +E+ + ++++++ + E + I ++E +EK D T L L
Sbjct: 241 LAEDTKVRSAEELKEMQDKVIKLQE-ELSENDKKIKALNHEIEELEKRKDKETGGILRSL 299
Query: 707 VDQAAD---LNIQ-QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
D A+ +N + Q + ++ KNL E K EK+M +E D+K K+
Sbjct: 300 EDALAEAQRVNTKSQSAFDLKKKNLACE--ESKRKELEKNM--VE-DSKT----LAAKEK 350
Query: 763 EKLALQASLH--YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
E + LH E K+ E L+ A++ +++ E + E T+
Sbjct: 351 EVKKITDGLHALQEASNKDAEA----LAAAQQHFNAVSAGLSSNE-DGAE--ATLAGQMM 403
Query: 821 AIQDNISQANSIFFLNQNIL----QEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
A +++IS+A + Q L QE +++Q +++ + + D++ L+ + LKE
Sbjct: 404 ACKNDISKAQTEAKQAQMKLKHAQQELKNKQAEVKKMDSGYRKDQEALEA----VKRLKE 459
Query: 877 KWLPTLRNLVAQINE 891
K ++ L + N+
Sbjct: 460 KLEAEMKKLNYEENK 474
Score = 56 (24.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 805 EKEFLEMPTTIEE-LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 863
E + E+ T +EE + IQ + + S + Q +++E EH R D K
Sbjct: 189 EAKLKEIKTILEEEITPTIQ-KLKEERSSYLEYQKVMREIEHLSRLYIAYQFLLAEDTK- 246
Query: 864 LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM-AVAGEVSLDEHESDFDKFGIL 921
+ + LKE +++ V ++ E S N +++ A+ E+ E D + GIL
Sbjct: 247 ----VRSAEELKE-----MQDKVIKLQEELSENDKKIKALNHEIEELEKRKDKETGGIL 296
Score = 52 (23.4 bits), Expect = 5.1e-15, Sum P(4) = 5.1e-15
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E +K R+ E LE V+ +K+KL + +MKK Y
Sbjct: 429 ELKNKQAEVKKMDSGYRKDQEALEAVKRLKEKL---EAEMKKLNY 470
Score = 51 (23.0 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 497 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 547
K+ FD+ N ES RKE + E+ + L + + ++ D HA++E
Sbjct: 312 KSQSAFDLKKKNLACEESKRKELEKNMVEDSKTLAAKEKEVKKITDGLHALQE 364
Score = 51 (23.0 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 15/74 (20%), Positives = 38/74 (51%)
Query: 178 QLPVQHCA--LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVR----QRAELL 231
Q+ ++H L K +++K ++ +++ + L +K L + E +++++ + LL
Sbjct: 420 QMKLKHAQQELKNKQAEVKKMDSGYRKDQEALEAVKRLKEKLEAEMKKLNYEENKEESLL 479
Query: 232 EKVESMKKKLPWLK 245
EK + + + LK
Sbjct: 480 EKRRQLSRDIGRLK 493
Score = 50 (22.7 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 30/129 (23%), Positives = 62/129 (48%)
Query: 363 AYEPPHDKIEKLGSQILELG-VQANQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKN 420
+Y ++++ L I E N K +Q+ +EK + +NK+ + ++R ++++D
Sbjct: 737 SYHKQQEELDALKKTIEESEETLKNTKEIQRKAEEKYEVLENKMKNAE-AERERELKDAQ 795
Query: 421 NKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLE--DHVGH 478
KL A + A + +++ + E+ EA + LE+ R H +Y + + V
Sbjct: 796 KKLDCAKTKADASSKK-----MKEKQQEV--EA---ITLELEELKREHTSYKQQLEAVNE 845
Query: 479 YIWKSFITQ 487
I KS+ +Q
Sbjct: 846 AI-KSYESQ 853
Score = 49 (22.3 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 15/57 (26%), Positives = 31/57 (54%)
Query: 384 QANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 438
++ +K L+K+ E K L + +++ +D L +++ +NK AL + A+ F A
Sbjct: 328 ESKRKELEKNMVEDSKTLAAKEKEVKKITDGLHALQEASNKDAEAL--AAAQQHFNA 382
Score = 47 (21.6 bits), Expect = 5.1e-15, Sum P(4) = 5.1e-15
Identities = 13/61 (21%), Positives = 32/61 (52%)
Query: 376 SQILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA 432
+ +L+ +Q + Q+ E + K + +++ TL+ + + E+K L + ++N+ A
Sbjct: 726 ADLLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQRKAEEKYEVLENKMKNAEA 785
Query: 433 E 433
E
Sbjct: 786 E 786
Score = 47 (21.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/75 (18%), Positives = 33/75 (44%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESM 237
Q +Q + ++ +L ++ T++ + +TL K + + E+ E + + + E
Sbjct: 730 QTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQRKAEEKYEVLENKMKNAEAERER 789
Query: 238 KKKLPWLKYDMKKAE 252
+ K K D K +
Sbjct: 790 ELKDAQKKLDCAKTK 804
Score = 39 (18.8 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 427 LRNSGAENIFEAYCWL 442
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
>UNIPROTKB|F1MY41 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9913 "Bos taurus" [GO:0000796 "condensin complex"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000228
"nuclear chromosome" evidence=ISS] [GO:0051383 "kinetochore
organization" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0046982 GO:GO:0007076
GO:GO:0000228 GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:DAAA02024368 IPI:IPI01001793 Ensembl:ENSBTAT00000011562
NextBio:20877854 Uniprot:F1MY41
Length = 1191
Score = 155 (59.6 bits), Expect = 5.2e-15, Sum P(4) = 5.2e-15
Identities = 74/334 (22%), Positives = 144/334 (43%)
Query: 653 DEAAKLQKEREEIINIVQIEKRK-RRE---MENHINLRKRKLESIEKEDDINTA-LAK-- 705
D ++K KE+++ + + +E + RRE E + K + S E + + + +AK
Sbjct: 806 DASSKKMKEKQQEVEAITLELEELRREHASYEQQLEAVKEAIISYEGQIAVMASEVAKNE 865
Query: 706 -LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMA-SIEFDAKIRELEFNLKQHE 763
LV++A + + + K I ++ I+ K++ +H + E KI+EL+ N+ +H+
Sbjct: 866 ELVNKAQE-EVSKQKEVITAQD---NIIKAKYAEIAQHKEQNNESQLKIKELDHNISKHK 921
Query: 764 KLALQASLHYEDCKKEVEHC--RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
+ A A+ K+ + KHL P KE E ++E++
Sbjct: 922 REAEDAAAKVSKMLKDYDWITVEKHLFGQPNSTYDFKANNP---KEAGERLQKLQEMKEK 978
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
+ N++ N+L E E R DL K+ + + + LA I+ L +K
Sbjct: 979 LGRNVNMRA------MNVLTEAEERYN---DLMKKKRIVENDKSKILATIEDLDQKKNQA 1029
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQS 941
+ ++N+ F F + L E G+ KV + + E L+ S
Sbjct: 1030 INIAWQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELS 1086
Query: 942 GGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
GG+RS+ + ++S+ P ++DE++ +D
Sbjct: 1087 GGQRSLVALSLILSMLLFKPAPIYILDEVDAALD 1120
Score = 120 (47.3 bits), Expect = 9.2e-10, Sum P(4) = 9.2e-10
Identities = 63/295 (21%), Positives = 128/295 (43%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLE--SIEKEDDINTA 702
+ E R +E+E A L+ E+ ++ Q + K E ++L + KL+ S K+ + A
Sbjct: 692 ENELRALEEELANLKNTAEKYRHLKQQWEMKAEE----VDLLQTKLQQSSYHKQQEELDA 747
Query: 703 LAKLVDQAADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
L K+++++ + N ++ + E K ++E K + AE+ + K+ +
Sbjct: 748 LKKIIEESEETLKNTKEIQKKAEEKYEVLEN-KMKNAEAERERELKDAQKKLDCAKTKAD 806
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI---EE 817
K + E E+E R+ + ++Q E++ E + M + + EE
Sbjct: 807 ASSKKMKEKQQEVEAITLELEELRREHASYEQQLEAVKEAIISYEGQIAVMASEVAKNEE 866
Query: 818 LEAAIQDNISQANSIFFLNQNILQ-EY----EHRQRQIEDLSTKQEAD------KKELKR 866
L Q+ +S+ + NI++ +Y +H+++ E +E D K+E +
Sbjct: 867 LVNKAQEEVSKQKEVITAQDNIIKAKYAEIAQHKEQNNESQLKIKELDHNISKHKREAED 926
Query: 867 FLAEIDA-LKE-KWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFG 919
A++ LK+ W+ ++L Q N T+ AGE L + + +K G
Sbjct: 927 AAAKVSKMLKDYDWITVEKHLFGQPNSTYDFKANNPKEAGE-RLQKLQEMKEKLG 980
Score = 115 (45.5 bits), Expect = 5.2e-15, Sum P(4) = 5.2e-15
Identities = 42/184 (22%), Positives = 86/184 (46%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISL---RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K +S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKALVSITFDNSD 87
Query: 101 TKE--------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K+ + +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEVHDEITVTRQVVIGGRNKYLINGVNANNTRVYDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDP--QLPVQHC--ALVEKSSKLKTIECTVKRN-GDTL 207
R+ + + P ++L E+A G + Q+ + +K +KL+ I+ ++ T+
Sbjct: 148 GRITKVMNMKPPEILSMIEEAAGTRMYEYKKQNAQRTIEKKEAKLREIKTILEEEITPTI 207
Query: 208 NQLK 211
+LK
Sbjct: 208 QKLK 211
Score = 58 (25.5 bits), Expect = 5.2e-15, Sum P(4) = 5.2e-15
Identities = 27/112 (24%), Positives = 57/112 (50%)
Query: 363 AYEPPHDKIEKLGSQILELGVQA--NQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDK 419
+Y ++++ L +I+E + N K +QK +EK + +NK+ + ++R ++++D
Sbjct: 737 SYHKQQEELDAL-KKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAE-AERERELKDA 794
Query: 420 NNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANY 471
KL A + A + +++ + E+ EA + LE+ R HA+Y
Sbjct: 795 QKKLDCAKTKADASSKK-----MKEKQQEV--EA---ITLELEELRREHASY 836
Score = 57 (25.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 16/85 (18%), Positives = 42/85 (49%)
Query: 167 LEETEKAVGDPQLPVQHCA--LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
+ +T+ Q+ ++H L K +++K ++ +++ + L +K L + E +++R+
Sbjct: 409 ISKTQTEAKQAQMKLKHAQQELKTKQTEIKKMDSGYRKDQEALEAVKKLKEKLETEMKRL 468
Query: 225 R----QRAELLEKVESMKKKLPWLK 245
+ LLE+ + + + LK
Sbjct: 469 NYEENKEESLLERRRQLSRDISRLK 493
Score = 56 (24.8 bits), Expect = 8.2e-15, Sum P(4) = 8.2e-15
Identities = 15/70 (21%), Positives = 37/70 (52%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
+E ++++ L +++ + Q+ L +K I+ +++ TL+ + K E+K L
Sbjct: 719 WEMKAEEVDLLQTKLQQSSYHKQQEELDALKK--IIEESEETLKNTKEIQKKAEEKYEVL 776
Query: 424 LHALRNSGAE 433
+ ++N+ AE
Sbjct: 777 ENKMKNAEAE 786
Score = 51 (23.0 bits), Expect = 5.2e-15, Sum P(4) = 5.2e-15
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E +K R+ E LE V+ +K+KL + +MK+ Y
Sbjct: 429 ELKTKQTEIKKMDSGYRKDQEALEAVKKLKEKL---ETEMKRLNY 470
Score = 51 (23.0 bits), Expect = 2.1e-13, Sum P(4) = 2.1e-13
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 359 QTVPAYEPPHDKIEKLGSQILELG--VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDM 416
++ A + DKI+KL ++ E ++A +++ EK K + LR D L +
Sbjct: 248 RSAEALKEMQDKIKKLQEEVYENDKKIKALSHEIEELEKRKDKEVGGI-LRSLEDALTEA 306
Query: 417 EDKNNK 422
+ N K
Sbjct: 307 QRVNTK 312
Score = 49 (22.3 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
KLL E E +L + + L+ + +K ++ E +K D + +L+ E +K ++ +
Sbjct: 222 KLLREIEHL---SRLYIAYQFLLAEDTKERSAEA-LKEMQDKIKKLQEEVYENDKKIKAL 277
Query: 225 RQRAELLEK 233
E LEK
Sbjct: 278 SHEIEELEK 286
Score = 44 (20.5 bits), Expect = 5.8e-13, Sum P(3) = 5.8e-13
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 387 QKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
+K L+K+ E K L + +++ +D L +++ +NK AL
Sbjct: 331 RKELEKNMVEDSKTLAAKEKEVKKITDGLSALQEASNKDAEAL 373
Score = 43 (20.2 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
AKL +K + E E +L + + +E L+ IE + R L A + + E
Sbjct: 190 AKLREIKTILEEEITPTIQKLKEERSSYLEYQKLLREIE-HLSRLYIAYQFLLAEDTK-E 247
Query: 219 KDVERVRQRAE----LLEKVESMKKKLPWLKYDMKKAE 252
+ E +++ + L E+V KK+ L +++++ E
Sbjct: 248 RSAEALKEMQDKIKKLQEEVYENDKKIKALSHEIEELE 285
Score = 42 (19.8 bits), Expect = 2.1e-13, Sum P(4) = 2.1e-13
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 497 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 547
K+ FD N S E+ RKE + E+ + L + + ++ D A++E
Sbjct: 312 KSQSAFDFKKKNLASEENKRKELEKNMVEDSKTLAAKEKEVKKITDGLSALQE 364
Score = 42 (19.8 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 13/75 (17%), Positives = 32/75 (42%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESM 237
Q +Q + ++ +L ++ ++ + +TL K + + E+ E + + + E
Sbjct: 730 QTKLQQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAERER 789
Query: 238 KKKLPWLKYDMKKAE 252
+ K K D K +
Sbjct: 790 ELKDAQKKLDCAKTK 804
Score = 40 (19.1 bits), Expect = 2.6e-12, Sum P(4) = 2.6e-12
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 405 TLRQCSDRLKDMEDKNNKL 423
T + ++ LK+M+DK KL
Sbjct: 245 TKERSAEALKEMQDKIKKL 263
Score = 39 (18.8 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 427 LRNSGAENIFEAYCWL 442
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
>UNIPROTKB|D4A5Q2 [details] [associations]
symbol:Smc2 "Structural maintenance of chromosomes protein"
species:10116 "Rattus norvegicus" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 RGD:1305227 GO:GO:0005524
GO:GO:0005634 GO:GO:0005694 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
CTD:10592 OrthoDB:EOG49S65K IPI:IPI00950982 RefSeq:NP_001102136.2
Ensembl:ENSRNOT00000066226 GeneID:362519 KEGG:rno:362519
ArrayExpress:D4A5Q2 Uniprot:D4A5Q2
Length = 1191
Score = 155 (59.6 bits), Expect = 6.5e-15, Sum P(4) = 6.5e-15
Identities = 72/342 (21%), Positives = 145/342 (42%)
Query: 653 DEAAKLQKEREEIINIVQIE----KRKRREMENHINLRKRKLESIEKEDDINTA-LAKLV 707
D ++K KE+++ + + +E KR+ E ++ +++ E + +I A +AK
Sbjct: 806 DASSKKMKEKQQEVEAITLELEELKREHASNEQQLDAVNEAIKAYEGQIEIMAAEVAKNK 865
Query: 708 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKH-MASIEFDAKIRELEFNLKQHEKLA 766
+ + K EI + I+ K + KH + + + KI+EL+ ++ +H++ A
Sbjct: 866 ESVNKAQNELMKQK-EIISAQDNIIKDKCAEVAKHNLQNNDSQLKIKELDHSISKHKREA 924
Query: 767 LQASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 824
A+ + + + KHL A P KE + ++E++ +
Sbjct: 925 DDAAAKVSKMLNDYDWINAEKHLFGQPNSAYDFKTNNP---KEAGQRLQKLQEVKEKLGR 981
Query: 825 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN 884
N++ N+L E E R DL K+ + + + LA I+ L +K L
Sbjct: 982 NVNMRA------MNVLTEAEERYN---DLMKKKRIVENDKSKILATIEDLDQKKNQALNI 1032
Query: 885 LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGE 944
++N+ F F + L E G+ KV + + E L+ SGG+
Sbjct: 1033 AWQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELSGGQ 1089
Query: 945 RSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
RS+ + ++S+ P ++DE++ +D + + + Q L
Sbjct: 1090 RSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 123 (48.4 bits), Expect = 6.5e-15, Sum P(4) = 6.5e-15
Identities = 45/184 (24%), Positives = 84/184 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSD 87
Query: 101 TK------EEH--LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K E H +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEAHDEITVTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA----LVEKSSKLKTIECTVKRN-GDTL 207
R+ + + P ++L E+A G + A + +K +KLK I+ ++ T+
Sbjct: 148 GRITKVLNMKPPEILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTI 207
Query: 208 NQLK 211
+LK
Sbjct: 208 QKLK 211
Score = 95 (38.5 bits), Expect = 8.5e-09, Sum P(4) = 8.5e-09
Identities = 50/235 (21%), Positives = 109/235 (46%)
Query: 677 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 736
++++ + ++++L+++E+E LA L + A +Q K E+K +++ K
Sbjct: 682 KDVQAELRTKEKELQALEEE------LAGLKNVAE--KYRQLKQQWEMKTEEGDLLQTKL 733
Query: 737 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR----KHLSD 789
+ H E DA I E E LK +++ +A YE + ++++ K L D
Sbjct: 734 QQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEALENKMKNAEAEREKELKD 793
Query: 790 AKRQAESIAFITPELEKEFLEMPTTIE----ELEAAIQDNISQANSIFFLNQNILQEYEH 845
A+++ + K+ E +E ELE +++ S + +N+ I + YE
Sbjct: 794 AQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELKREHASNEQQLDAVNEAI-KAYEG 852
Query: 846 RQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR-NLVA-QINETFSRNFQ 898
QIE ++ + +K+ + + A+ + +K+K + + + N++ + E N Q
Sbjct: 853 ---QIEIMAAEVAKNKESVNK--AQNELMKQKEIISAQDNIIKDKCAEVAKHNLQ 902
Score = 74 (31.1 bits), Expect = 9.5e-07, Sum P(4) = 9.5e-07
Identities = 52/238 (21%), Positives = 95/238 (39%)
Query: 653 DEAAKLQKEREEII-NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL--VDQ 709
D K +E EE + N +I+K+ + E N K K E+E ++ A KL
Sbjct: 746 DALKKTIEESEETLKNTKEIQKKAEEKYEALEN--KMKNAEAEREKELKDAQKKLDCAKT 803
Query: 710 AADLNIQQFKYAI-EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ 768
AD + ++ K E++ + +E+ K +A + DA ++ Q E +A +
Sbjct: 804 KADASSKKMKEKQQEVEAITLELEELKREHASNEQ---QLDAVNEAIKAYEGQIEIMAAE 860
Query: 769 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT---IEELEAAIQDN 825
+ + E K K Q I E+ K L+ + I+EL+ +I +
Sbjct: 861 VAKNKESVNKAQNELMKQKEIISAQDNIIKDKCAEVAKHNLQNNDSQLKIKELDHSISKH 920
Query: 826 ISQANSIFFLNQNILQEYE------HRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+A+ +L +Y+ H Q + + KE + L ++ +KEK
Sbjct: 921 KREADDAAAKVSKMLNDYDWINAEKHLFGQPNSAYDFKTNNPKEAGQRLQKLQEVKEK 978
Score = 67 (28.6 bits), Expect = 4.5e-06, Sum P(4) = 4.5e-06
Identities = 26/98 (26%), Positives = 51/98 (52%)
Query: 790 AKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQ 849
A+ QA SI EL+ E+ T +EL+A +++ ++ ++ + + Q++E + +
Sbjct: 667 ARSQAASILTKFQELKDVQAELRTKEKELQA-LEEELAGLKNVAEKYRQLKQQWEMKTEE 725
Query: 850 IEDLSTKQEADKKELKRFLAEIDALK---EKWLPTLRN 884
+ L TK + ++ E+DALK E+ TL+N
Sbjct: 726 GDLLQTKLQQSSYHKQQ--EELDALKKTIEESEETLKN 761
Score = 61 (26.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 805 EKEFLEMPTTIEE-LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 863
E + E+ T +EE + IQ + + S + Q +++E EH R D KE
Sbjct: 189 EAKLKEIKTILEEEITPTIQ-KLKEERSSYLEYQKVMREIEHLSRLYIAYQFLLAEDTKE 247
Query: 864 LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM-AVAGEVSLDEHESDFDKFGIL 921
R E+ +++K + ++ E S N +++ A+ E+ E D + GIL
Sbjct: 248 --RSAGELKEMQDK--------ILKLQEVLSENEKKIKALNCEIEELEKRKDKETGGIL 296
Score = 59 (25.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 52/250 (20%), Positives = 105/250 (42%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA--LAKLVDQ 709
E A +L++ +++I+ + ++ E E I ++E +EK D T L L D
Sbjct: 247 ERSAGELKEMQDKILKLQEVLS----ENEKKIKALNCEIEELEKRKDKETGGILRSLEDA 302
Query: 710 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 769
A+ + K+ + +K++AS E K +ELE N+ + K AL A
Sbjct: 303 FAEAQ------RVNTKS------QSAFDLKKKNLASEE--TKRKELEKNMAEDSK-ALAA 347
Query: 770 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 829
++ KK + + + AE++A + + + EA + +
Sbjct: 348 K--EKEVKKLTDGLHGLQEASNKDAEALAAAQQHFNAVSAGLSSNEDGAEATLAGQMMAC 405
Query: 830 -NSIFFLNQNILQ---EYEHRQRQIEDLSTK-QEAD---KKELKRFLAEIDALKEKWLPT 881
N I Q + +H Q+++++ + ++ D KK+ + F A + +KEK
Sbjct: 406 KNDISKAQTGAKQAQMKLKHAQQELKNKQAEVRKMDSGYKKDQEAFEA-VKKVKEKLETE 464
Query: 882 LRNLVAQINE 891
++ L + N+
Sbjct: 465 MKKLNYEDNK 474
Score = 54 (24.1 bits), Expect = 6.5e-15, Sum P(4) = 6.5e-15
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 497 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 547
K+ FD+ N S E+ RKE ++E+ +AL + + ++ D H ++E
Sbjct: 312 KSQSAFDLKKKNLASEETKRKELEKNMAEDSKALAAKEKEVKKLTDGLHGLQE 364
Score = 53 (23.7 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 363 AYEPPHDKIEKLGSQILELG-VQANQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKN 420
+Y ++++ L I E N K +QK +EK +NK+ + ++R K+++D
Sbjct: 737 SYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEALENKMKNAE-AEREKELKDAQ 795
Query: 421 NKL 423
KL
Sbjct: 796 KKL 798
Score = 52 (23.4 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 20/92 (21%), Positives = 43/92 (46%)
Query: 160 KLSPVKLLEETEKAVGDP-QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
K +K E + GD Q +Q + ++ +L ++ T++ + +TL K + + E
Sbjct: 711 KYRQLKQQWEMKTEEGDLLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAE 770
Query: 219 KDVERVRQR-----AELLEKVESMKKKLPWLK 245
+ E + + AE ++++ +KKL K
Sbjct: 771 EKYEALENKMKNAEAEREKELKDAQKKLDCAK 802
Score = 50 (22.7 bits), Expect = 2.6e-14, Sum P(4) = 2.6e-14
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 378 ILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
+L+ +Q + Q+ E + K + +++ TL+ + K E+K L + ++N+ AE
Sbjct: 728 LLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEALENKMKNAEAE 786
Score = 49 (22.3 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 384 QANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 438
+ +K L+K+ E K L + +++ +D L +++ +NK AL + A+ F A
Sbjct: 328 ETKRKELEKNMAEDSKALAAKEKEVKKLTDGLHGLQEASNKDAEAL--AAAQQHFNA 382
Score = 48 (22.0 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 45/179 (25%), Positives = 79/179 (44%)
Query: 645 QTEQRLIEDEAAKLQKERE-----EIINIVQIEKRKRREM----ENHINLRKRKLESIEK 695
+ E+ + ED A KE+E + ++ +Q K E + H N L S
Sbjct: 333 ELEKNMAEDSKALAAKEKEVKKLTDGLHGLQEASNKDAEALAAAQQHFNAVSAGLSS--N 390
Query: 696 EDDINTALA-KLVDQAADLNIQQF--KYA-IEIKNLLVEIVSCKWSYAEKHMASIEFDAK 751
ED LA +++ D++ Q K A +++K+ E+ + K + K + + D +
Sbjct: 391 EDGAEATLAGQMMACKNDISKAQTGAKQAQMKLKHAQQELKN-KQAEVRKMDSGYKKDQE 449
Query: 752 IRELEFNLKQHEKLALQAS-LHYEDCKKE--VEHCR---KHLSDAKRQAESIAFITPEL 804
E +K EKL + L+YED K+E +E R + +S+ K E++ P L
Sbjct: 450 AFEAVKKVK--EKLETEMKKLNYEDNKEERLLEKHRQVSRDISNLKGTYEALLAKFPNL 506
Score = 46 (21.3 bits), Expect = 6.5e-15, Sum P(4) = 6.5e-15
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 405 TLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYG 455
T + + LK+M+DK KL L + + I C +++ +KE G
Sbjct: 245 TKERSAGELKEMQDKILKLQEVL-SENEKKIKALNCEIEELEKRKDKETGG 294
Score = 44 (20.5 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E K ++ E E V+ +K+KL + +MKK Y
Sbjct: 429 ELKNKQAEVRKMDSGYKKDQEAFEAVKKVKEKL---ETEMKKLNY 470
Score = 44 (20.5 bits), Expect = 8.9e-14, Sum P(3) = 8.9e-14
Identities = 27/107 (25%), Positives = 42/107 (39%)
Query: 474 DHVGH-YIWKSFI-TQDAGDRDFLAKNLKPFDVPILNY--VSNESSRK--------EPFQ 521
+H+ YI F+ +D +R A LK IL V +E+ +K E +
Sbjct: 228 EHLSRLYIAYQFLLAEDTKERS--AGELKEMQDKILKLQEVLSENEKKIKALNCEIEELE 285
Query: 522 ISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQK 568
++ GI L+ F V S F L + S+ET +K
Sbjct: 286 KRKDKETGGILRSLEDAFAEAQRVNTKSQSAFDLKKKNLASEETKRK 332
Score = 39 (18.8 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 427 LRNSGAENIFEAYCWL 442
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
Score = 39 (18.8 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 25/111 (22%), Positives = 50/111 (45%)
Query: 125 KVVPKGE--VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQ 182
K + K E + EI ++ Q L ++R + L K++ E E +L +
Sbjct: 183 KTIEKKEAKLKEIKTILEEEITPTIQKLKEERS---SYLEYQKVMREIEHL---SRLYIA 236
Query: 183 HCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK 233
+ L+ + +K ++ +K D + +L+ + E EK ++ + E LEK
Sbjct: 237 YQFLLAEDTKERSAG-ELKEMQDKILKLQEVLSENEKKIKALNCEIEELEK 286
>RGD|1305227 [details] [associations]
symbol:Smc2 "structural maintenance of chromosomes 2"
species:10116 "Rattus norvegicus" [GO:0000228 "nuclear chromosome"
evidence=ISO] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0000796 "condensin complex" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA;ISO] [GO:0010032
"meiotic chromosome condensation" evidence=ISO] [GO:0045132
"meiotic chromosome segregation" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0051383 "kinetochore
organization" evidence=ISO] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 RGD:1305227 GO:GO:0005524
GO:GO:0005737 GO:GO:0006281 GO:GO:0006310 GO:GO:0007076
GO:GO:0000228 GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
PANTHER:PTHR18937:SF9 IPI:IPI00358733 PRIDE:D4AB57
Ensembl:ENSRNOT00000030563 UCSC:RGD:1305227 ArrayExpress:D4AB57
Uniprot:D4AB57
Length = 1230
Score = 155 (59.6 bits), Expect = 7.5e-15, Sum P(4) = 7.5e-15
Identities = 72/342 (21%), Positives = 145/342 (42%)
Query: 653 DEAAKLQKEREEIINIVQIE----KRKRREMENHINLRKRKLESIEKEDDINTA-LAKLV 707
D ++K KE+++ + + +E KR+ E ++ +++ E + +I A +AK
Sbjct: 806 DASSKKMKEKQQEVEAITLELEELKREHASNEQQLDAVNEAIKAYEGQIEIMAAEVAKNK 865
Query: 708 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKH-MASIEFDAKIRELEFNLKQHEKLA 766
+ + K EI + I+ K + KH + + + KI+EL+ ++ +H++ A
Sbjct: 866 ESVNKAQNELMKQK-EIISAQDNIIKDKCAEVAKHNLQNNDSQLKIKELDHSISKHKREA 924
Query: 767 LQASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 824
A+ + + + KHL A P KE + ++E++ +
Sbjct: 925 DDAAAKVSKMLNDYDWINAEKHLFGQPNSAYDFKTNNP---KEAGQRLQKLQEVKEKLGR 981
Query: 825 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN 884
N++ N+L E E R DL K+ + + + LA I+ L +K L
Sbjct: 982 NVNMRA------MNVLTEAEERYN---DLMKKKRIVENDKSKILATIEDLDQKKNQALNI 1032
Query: 885 LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGE 944
++N+ F F + L E G+ KV + + E L+ SGG+
Sbjct: 1033 AWQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELSGGQ 1089
Query: 945 RSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
RS+ + ++S+ P ++DE++ +D + + + Q L
Sbjct: 1090 RSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 123 (48.4 bits), Expect = 7.5e-15, Sum P(4) = 7.5e-15
Identities = 45/184 (24%), Positives = 84/184 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSD 87
Query: 101 TK------EEH--LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K E H +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEAHDEITVTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA----LVEKSSKLKTIECTVKRN-GDTL 207
R+ + + P ++L E+A G + A + +K +KLK I+ ++ T+
Sbjct: 148 GRITKVLNMKPPEILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTI 207
Query: 208 NQLK 211
+LK
Sbjct: 208 QKLK 211
Score = 95 (38.5 bits), Expect = 9.8e-09, Sum P(4) = 9.8e-09
Identities = 50/235 (21%), Positives = 109/235 (46%)
Query: 677 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 736
++++ + ++++L+++E+E LA L + A +Q K E+K +++ K
Sbjct: 682 KDVQAELRTKEKELQALEEE------LAGLKNVAE--KYRQLKQQWEMKTEEGDLLQTKL 733
Query: 737 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR----KHLSD 789
+ H E DA I E E LK +++ +A YE + ++++ K L D
Sbjct: 734 QQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEALENKMKNAEAEREKELKD 793
Query: 790 AKRQAESIAFITPELEKEFLEMPTTIE----ELEAAIQDNISQANSIFFLNQNILQEYEH 845
A+++ + K+ E +E ELE +++ S + +N+ I + YE
Sbjct: 794 AQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELKREHASNEQQLDAVNEAI-KAYEG 852
Query: 846 RQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR-NLVA-QINETFSRNFQ 898
QIE ++ + +K+ + + A+ + +K+K + + + N++ + E N Q
Sbjct: 853 ---QIEIMAAEVAKNKESVNK--AQNELMKQKEIISAQDNIIKDKCAEVAKHNLQ 902
Score = 74 (31.1 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 52/238 (21%), Positives = 95/238 (39%)
Query: 653 DEAAKLQKEREEII-NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL--VDQ 709
D K +E EE + N +I+K+ + E N K K E+E ++ A KL
Sbjct: 746 DALKKTIEESEETLKNTKEIQKKAEEKYEALEN--KMKNAEAEREKELKDAQKKLDCAKT 803
Query: 710 AADLNIQQFKYAI-EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ 768
AD + ++ K E++ + +E+ K +A + DA ++ Q E +A +
Sbjct: 804 KADASSKKMKEKQQEVEAITLELEELKREHASNEQ---QLDAVNEAIKAYEGQIEIMAAE 860
Query: 769 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT---IEELEAAIQDN 825
+ + E K K Q I E+ K L+ + I+EL+ +I +
Sbjct: 861 VAKNKESVNKAQNELMKQKEIISAQDNIIKDKCAEVAKHNLQNNDSQLKIKELDHSISKH 920
Query: 826 ISQANSIFFLNQNILQEYE------HRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+A+ +L +Y+ H Q + + KE + L ++ +KEK
Sbjct: 921 KREADDAAAKVSKMLNDYDWINAEKHLFGQPNSAYDFKTNNPKEAGQRLQKLQEVKEK 978
Score = 67 (28.6 bits), Expect = 5.2e-06, Sum P(4) = 5.2e-06
Identities = 26/98 (26%), Positives = 51/98 (52%)
Query: 790 AKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQ 849
A+ QA SI EL+ E+ T +EL+A +++ ++ ++ + + Q++E + +
Sbjct: 667 ARSQAASILTKFQELKDVQAELRTKEKELQA-LEEELAGLKNVAEKYRQLKQQWEMKTEE 725
Query: 850 IEDLSTKQEADKKELKRFLAEIDALK---EKWLPTLRN 884
+ L TK + ++ E+DALK E+ TL+N
Sbjct: 726 GDLLQTKLQQSSYHKQQ--EELDALKKTIEESEETLKN 761
Score = 61 (26.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 805 EKEFLEMPTTIEE-LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 863
E + E+ T +EE + IQ + + S + Q +++E EH R D KE
Sbjct: 189 EAKLKEIKTILEEEITPTIQ-KLKEERSSYLEYQKVMREIEHLSRLYIAYQFLLAEDTKE 247
Query: 864 LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM-AVAGEVSLDEHESDFDKFGIL 921
R E+ +++K + ++ E S N +++ A+ E+ E D + GIL
Sbjct: 248 --RSAGELKEMQDK--------ILKLQEVLSENEKKIKALNCEIEELEKRKDKETGGIL 296
Score = 59 (25.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 52/250 (20%), Positives = 105/250 (42%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA--LAKLVDQ 709
E A +L++ +++I+ + ++ E E I ++E +EK D T L L D
Sbjct: 247 ERSAGELKEMQDKILKLQEVLS----ENEKKIKALNCEIEELEKRKDKETGGILRSLEDA 302
Query: 710 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 769
A+ + K+ + +K++AS E K +ELE N+ + K AL A
Sbjct: 303 FAEAQ------RVNTKS------QSAFDLKKKNLASEE--TKRKELEKNMAEDSK-ALAA 347
Query: 770 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 829
++ KK + + + AE++A + + + EA + +
Sbjct: 348 K--EKEVKKLTDGLHGLQEASNKDAEALAAAQQHFNAVSAGLSSNEDGAEATLAGQMMAC 405
Query: 830 -NSIFFLNQNILQ---EYEHRQRQIEDLSTK-QEAD---KKELKRFLAEIDALKEKWLPT 881
N I Q + +H Q+++++ + ++ D KK+ + F A + +KEK
Sbjct: 406 KNDISKAQTGAKQAQMKLKHAQQELKNKQAEVRKMDSGYKKDQEAFEA-VKKVKEKLETE 464
Query: 882 LRNLVAQINE 891
++ L + N+
Sbjct: 465 MKKLNYEDNK 474
Score = 54 (24.1 bits), Expect = 7.5e-15, Sum P(4) = 7.5e-15
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 497 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 547
K+ FD+ N S E+ RKE ++E+ +AL + + ++ D H ++E
Sbjct: 312 KSQSAFDLKKKNLASEETKRKELEKNMAEDSKALAAKEKEVKKLTDGLHGLQE 364
Score = 53 (23.7 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 363 AYEPPHDKIEKLGSQILELG-VQANQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKN 420
+Y ++++ L I E N K +QK +EK +NK+ + ++R K+++D
Sbjct: 737 SYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEALENKMKNAE-AEREKELKDAQ 795
Query: 421 NKL 423
KL
Sbjct: 796 KKL 798
Score = 52 (23.4 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 20/92 (21%), Positives = 43/92 (46%)
Query: 160 KLSPVKLLEETEKAVGDP-QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
K +K E + GD Q +Q + ++ +L ++ T++ + +TL K + + E
Sbjct: 711 KYRQLKQQWEMKTEEGDLLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAE 770
Query: 219 KDVERVRQR-----AELLEKVESMKKKLPWLK 245
+ E + + AE ++++ +KKL K
Sbjct: 771 EKYEALENKMKNAEAEREKELKDAQKKLDCAK 802
Score = 50 (22.7 bits), Expect = 3.0e-14, Sum P(4) = 3.0e-14
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 378 ILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
+L+ +Q + Q+ E + K + +++ TL+ + K E+K L + ++N+ AE
Sbjct: 728 LLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEALENKMKNAEAE 786
Score = 49 (22.3 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 384 QANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 438
+ +K L+K+ E K L + +++ +D L +++ +NK AL + A+ F A
Sbjct: 328 ETKRKELEKNMAEDSKALAAKEKEVKKLTDGLHGLQEASNKDAEAL--AAAQQHFNA 382
Score = 48 (22.0 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
Identities = 45/179 (25%), Positives = 79/179 (44%)
Query: 645 QTEQRLIEDEAAKLQKERE-----EIINIVQIEKRKRREM----ENHINLRKRKLESIEK 695
+ E+ + ED A KE+E + ++ +Q K E + H N L S
Sbjct: 333 ELEKNMAEDSKALAAKEKEVKKLTDGLHGLQEASNKDAEALAAAQQHFNAVSAGLSS--N 390
Query: 696 EDDINTALA-KLVDQAADLNIQQF--KYA-IEIKNLLVEIVSCKWSYAEKHMASIEFDAK 751
ED LA +++ D++ Q K A +++K+ E+ + K + K + + D +
Sbjct: 391 EDGAEATLAGQMMACKNDISKAQTGAKQAQMKLKHAQQELKN-KQAEVRKMDSGYKKDQE 449
Query: 752 IRELEFNLKQHEKLALQAS-LHYEDCKKE--VEHCR---KHLSDAKRQAESIAFITPEL 804
E +K EKL + L+YED K+E +E R + +S+ K E++ P L
Sbjct: 450 AFEAVKKVK--EKLETEMKKLNYEDNKEERLLEKHRQVSRDISNLKGTYEALLAKFPNL 506
Score = 46 (21.3 bits), Expect = 7.5e-15, Sum P(4) = 7.5e-15
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 405 TLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYG 455
T + + LK+M+DK KL L + + I C +++ +KE G
Sbjct: 245 TKERSAGELKEMQDKILKLQEVL-SENEKKIKALNCEIEELEKRKDKETGG 294
Score = 44 (20.5 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E K ++ E E V+ +K+KL + +MKK Y
Sbjct: 429 ELKNKQAEVRKMDSGYKKDQEAFEAVKKVKEKL---ETEMKKLNY 470
Score = 44 (20.5 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 27/107 (25%), Positives = 42/107 (39%)
Query: 474 DHVGH-YIWKSFI-TQDAGDRDFLAKNLKPFDVPILNY--VSNESSRK--------EPFQ 521
+H+ YI F+ +D +R A LK IL V +E+ +K E +
Sbjct: 228 EHLSRLYIAYQFLLAEDTKERS--AGELKEMQDKILKLQEVLSENEKKIKALNCEIEELE 285
Query: 522 ISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQK 568
++ GI L+ F V S F L + S+ET +K
Sbjct: 286 KRKDKETGGILRSLEDAFAEAQRVNTKSQSAFDLKKKNLASEETKRK 332
Score = 39 (18.8 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 427 LRNSGAENIFEAYCWL 442
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
Score = 39 (18.8 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 25/111 (22%), Positives = 50/111 (45%)
Query: 125 KVVPKGE--VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQ 182
K + K E + EI ++ Q L ++R + L K++ E E +L +
Sbjct: 183 KTIEKKEAKLKEIKTILEEEITPTIQKLKEERS---SYLEYQKVMREIEHL---SRLYIA 236
Query: 183 HCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK 233
+ L+ + +K ++ +K D + +L+ + E EK ++ + E LEK
Sbjct: 237 YQFLLAEDTKERSAG-ELKEMQDKILKLQEVLSENEKKIKALNCEIEELEK 286
>GENEDB_PFALCIPARUM|PFD0685c [details] [associations]
symbol:PFD0685c "chromosome associated protein,
putative" species:5833 "Plasmodium falciparum" [GO:0000228 "nuclear
chromosome" evidence=ISS] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0051301 GO:GO:0006275 GO:GO:0000785 HSSP:P58301 GO:GO:0000070
EMBL:AL844503 GO:GO:0003680 eggNOG:COG1196 SUPFAM:SSF75553
GenomeReviews:AL844503_GR GO:GO:0034990 KO:K06669
RefSeq:XP_001351448.1 ProteinModelPortal:Q8I1U7 IntAct:Q8I1U7
MINT:MINT-1568808 PRIDE:Q8I1U7 EnsemblProtists:PFD0685c:mRNA
GeneID:812569 KEGG:pfa:PFD0685c EuPathDB:PlasmoDB:PF3D7_0414000
HOGENOM:HOG000282685 OMA:CASTINS ProtClustDB:CLSZ2514476
Uniprot:Q8I1U7
Length = 1193
Score = 152 (58.6 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 89/399 (22%), Positives = 184/399 (46%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
+ E + +++E K++ E ++ N +++ +KR E ++ I + + E ++ D+ N L
Sbjct: 785 LNDEVKKLKEELNKIRNEYDDFKNKLELLYQKRNENDSSIYMEE--YEDVDI-DEYNNDL 841
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-H 762
A D + + ++ Y +I+ + E+ + K S + + + KI +L + Q +
Sbjct: 842 ADKKDHSDKIEKEKIHYEQKIREINKEMENVKSSIDKILINEKKHKKKILDLCHQMNQIN 901
Query: 763 EKLALQASLHYEDCKKEV------EHCRKHLSDAKRQAES-IAFITPELEKEFLEMPTTI 815
E+L + KK+V + ++ + K+Q + + +T EL+K + +
Sbjct: 902 EELRILEGKEENIRKKKVLLPQGIQELEEYRTYDKQQLSAKLKSVTMELKKY-----SNV 956
Query: 816 EELEAAIQDNI--SQANSIFFLNQNILQEYEHRQRQIEDLSTKQ----EADKKELKRFLA 869
E +A + NI + N + ++ I +++ + I+ + K+ EA ++ ++ +
Sbjct: 957 NE-KAGDRLNILMNDFNELKKRHEEINSSHKNIKDMIQHIGKKKDEALEATYVKINKYFS 1015
Query: 870 EIDALKEKWLPTLRNLVAQ-INET-FSRNFQEMA---VAGEVSLDEHESDFDKF-GILIK 923
E +L K +LV + +NE + QEM+ + + +DE E DK GI I
Sbjct: 1016 EYFSLLFK--NRKASLVLKKMNEKEYKEKLQEMSEKRIKRRI-IDE-EVYIDKITGISIN 1071
Query: 924 VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 983
+ ++ + SGGERS+ I + L + N F DEI+ +D I+ R
Sbjct: 1072 ITSNDDEKM-TYTIQELSGGERSIVAICLFLCLNKIDNFSFFFFDEIDAALDTIH-RDNL 1129
Query: 984 QQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMN 1022
L++ + T F++T LEYS+ I+ I++
Sbjct: 1130 SLLLKELAHRGTQ--FIITTFRKELLEYSDNMYIVKIVD 1166
Score = 120 (47.3 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 49/212 (23%), Positives = 97/212 (45%)
Query: 23 IIEIELHNFMTFDHLICKPGSR-LNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIG 81
I +I L F T+ + +R +N ++G NGSGKS+++ AI L + + +
Sbjct: 3 IKQIRLKGFRTYKNETTIDFTRGINCIVGFNGSGKSNILLAIEFILSDVCEY--KQIYLH 60
Query: 82 AYVKRGEESGYIKISLRGDTKEEHLTI-------MRKIDTRNKSEWFFNGKVVPKGEVLE 134
+ + Y++I D E++ ++ ++K+ K E F N K + K + +E
Sbjct: 61 EGIGNAVRNCYVEIIF--DNSEKYFSMFKESEIKIKKVLENMKCEIFVNDKNISKNQYVE 118
Query: 135 ITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVG----DPQLPVQHCALVEKS 190
+ + + +NNL + Q ++ + + + ++L + +G + + L E
Sbjct: 119 LLESCGLCINNLYNIIKQGQIIKLSNMKDEEILNYLKSILGAKIFEEKKKDALSMLKECD 178
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVE 222
SK TIE K D ++L++L E E +E
Sbjct: 179 SKKVTIE---KEFNDMNSKLESLQEEFENFLE 207
Score = 86 (35.3 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 37/202 (18%), Positives = 95/202 (47%)
Query: 651 IEDEAAKLQKEREEIINIVQIEK------RKRREMENHINLRKRKLESIEKEDDINTALA 704
I+++ K + + I NI QI + K + +++ I +++++E+ K ++IN L+
Sbjct: 308 IKEKNIKESQNKNRIKNINQINEFILRVNEKLQSLKSDIVSKEKQIEN--KNNEINMLLS 365
Query: 705 KLVDQAADLNIQQFKYAIE--IKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLK 760
K ++ D N IE I ++ +E+ + + EK++ +E ++K+ L ++K
Sbjct: 366 KNKNKNTDANYSHNVKKIEKMINDINIELSFLEKETIKNEKYLKELEEESKV--LNKSIK 423
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
++E L+ + + + E C + +++ E++ + +E+ +E+
Sbjct: 424 ENETLSQKYGSEINELNNKSEKCVEQKRQCQQKISEGTTNLNEIKCQIIEVNDKYDEIIK 483
Query: 821 AIQDNISQANSIFFLNQNILQE 842
+ I + + ++I +E
Sbjct: 484 SSNKEILKIVDLIMAEKSIKRE 505
Score = 79 (32.9 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 50/261 (19%), Positives = 116/261 (44%)
Query: 646 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDD-INTALA 704
T ++ D +KL+ +EE N ++ +K ++ ++ L + ++I +E + + L
Sbjct: 183 TIEKEFNDMNSKLESLQEEFENFLEYKKLEKEKVHLDYFLNEINYKNIYEETQMLKSKLQ 242
Query: 705 KLVDQAAD----LNIQ---QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+L ++ D LN+ + +Y ++ + +EI SC+ ++ K +I D + +
Sbjct: 243 ELKNKTQDEDNHLNLSNNNKSEYNEKLNKMKLEIASCQ-NHLNK---TISEDIQNKR--- 295
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
N+ H ++ + + ++ K+ + + + + E I + +L+ + + I
Sbjct: 296 NIV-HLQMLIDEKIKEKNIKESQN--KNRIKNINQINEFILRVNEKLQS----LKSDIVS 348
Query: 818 LEAAIQDNISQANSIFFLNQNILQE--YEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
E I++ ++ N + N+N + Y H ++IE + EL FL +
Sbjct: 349 KEKQIENKNNEINMLLSKNKNKNTDANYSHNVKKIEKMINDINI---ELS-FLEKETIKN 404
Query: 876 EKWLPTLRNLVAQINETFSRN 896
EK+L L +N++ N
Sbjct: 405 EKYLKELEEESKVLNKSIKEN 425
Score = 75 (31.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 46/213 (21%), Positives = 93/213 (43%)
Query: 659 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA-DLNIQQ 717
+ E E +N +++E +NH+N K E I+ + +I L L+D+ + NI++
Sbjct: 262 KSEYNEKLNKMKLEIAS---CQNHLN--KTISEDIQNKRNI-VHLQMLIDEKIKEKNIKE 315
Query: 718 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 777
+ IKN+ +I EK + S++ D +E + K +E L + ++
Sbjct: 316 SQNKNRIKNIN-QINEFILRVNEK-LQSLKSDIVSKEKQIENKNNEINMLLSKNKNKNTD 373
Query: 778 KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ 837
H K + ++ I LEKE ++ ++ELE + N N+
Sbjct: 374 ANYSHNVKKI---EKMINDINIELSFLEKETIKNEKYLKELE----EESKVLNKSIKENE 426
Query: 838 NILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 870
+ Q+Y ++ + S K K++ ++ ++E
Sbjct: 427 TLSQKYGSEINELNNKSEKCVEQKRQCQQKISE 459
Score = 62 (26.9 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 55/243 (22%), Positives = 100/243 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
MQT ++++E K ++ + N + K + +N++K + + +I L
Sbjct: 541 MQTAKKIVEFIEKKREERTSKEFNFKEFYFGKLTIVPL-LNIKKFNEFNYPNDKNI-VPL 598
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVE-IVSCKWSYAEKHMASIEFDAK-IRELEFNLKQ 761
K V+ + I +F I K ++V+ + SC+ +Y E + + D + + F
Sbjct: 599 IKCVNYNS--KIYEFLKNILFKTIIVKSLESCE-NYLEDNYNCVNIDGDYLSKHGFMYGG 655
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
+ K Y K+ E +K S + +I I EL + +T+ +
Sbjct: 656 YNKKKYGIYTVYNKLKELKEEEKKEKSHIEELNNNIEKIDDELRNIYDTKSSTVAKKNGC 715
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
S NSI N NI E+ + E ++ QE K+ L++ D LK + L
Sbjct: 716 A----STINSI---NNNIYSNEENIRLTSEKINYIQEK-KQNLEQHK---DQLKMQILQ- 763
Query: 882 LRN 884
LRN
Sbjct: 764 LRN 766
Score = 59 (25.8 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 25/99 (25%), Positives = 47/99 (47%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL-----KDMEDKNNKLL 424
K+++L ++ + N KSE + LN+ KL + C + L +D+++K N ++
Sbjct: 240 KLQELKNKTQDEDNHLNLSNNNKSEYNEKLNKMKLEIASCQNHLNKTISEDIQNKRN-IV 298
Query: 425 HALRNSGAENIFEAYCWLQQHRHEL-NKEAYGPVLLEVN 462
H L+ E I E Q+++ + N +L VN
Sbjct: 299 H-LQMLIDEKIKEKNIKESQNKNRIKNINQINEFILRVN 336
Score = 52 (23.4 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 21/107 (19%), Positives = 52/107 (48%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 431
+K GS+I EL ++ + QK + ++ +++ L + ++ ++ DK ++++ ++S
Sbjct: 430 QKYGSEINELNNKSEKCVEQKRQCQQKISEGTTNLNEIKCQIIEVNDKYDEII---KSSN 486
Query: 432 AENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN---RAHANYLEDH 475
E I + + + + G ++ +NV +A LE+H
Sbjct: 487 KE-ILKIVDLIMAEKSIKRENILGFLIDNINVDKTYVKAVDTILENH 532
Score = 50 (22.7 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 23/85 (27%), Positives = 37/85 (43%)
Query: 836 NQNILQEYEHR--QRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETF 893
N N+ + + I L+ + + K+EL + E D K K L L + NE
Sbjct: 766 NNNVNPDESEKVGSTDINSLNDEVKKLKEELNKIRNEYDDFKNK----LELLYQKRNEND 821
Query: 894 SRNFQEMAVAGEVSLDEHESDF-DK 917
S + E +V +DE+ +D DK
Sbjct: 822 SSIYMEEYE--DVDIDEYNNDLADK 844
Score = 49 (22.3 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 25/111 (22%), Positives = 41/111 (36%)
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXX 259
+ R + L LK+ V +EK +E +L K +++KK E +
Sbjct: 332 ILRVNEKLQSLKSDIVSKEKQIENKNNEINMLLSKNKNKNTDANYSHNVKKIEKMINDIN 391
Query: 260 XXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDC--KKLSSLINE-NSK 307
N + E K K+I + + +K S INE N+K
Sbjct: 392 IELSFLEKETIKNEKYLKELEEESKVLNKSIKENETLSQKYGSEINELNNK 442
Score = 48 (22.0 bits), Expect = 5.4e-14, Sum P(4) = 5.4e-14
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 383 VQANQKRLQ-KSEKEKILNQNKLTLRQCSDRLKD--MEDKNNKLL-HALRNSGAENIFEA 438
+ +N++ ++ SEK + + K L Q D+LK ++ +NN + G+ +I
Sbjct: 726 IYSNEENIRLTSEKINYIQEKKQNLEQHKDQLKMQILQLRNNNVNPDESEKVGSTDINSL 785
Query: 439 YCWLQQHRHELNK 451
+++ + ELNK
Sbjct: 786 NDEVKKLKEELNK 798
Score = 48 (22.0 bits), Expect = 6.8e-14, Sum P(4) = 6.8e-14
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 208 NQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKA 251
N+LK L E++K+ + + +EK++ + + YD K +
Sbjct: 668 NKLKELKEEEKKEKSHIEELNNNIEKIDDELRNI----YDTKSS 707
>UNIPROTKB|Q8I1U7 [details] [associations]
symbol:PFD0685c "Structural maintenance of chromosomes
protein 3 homolog" species:36329 "Plasmodium falciparum 3D7"
[GO:0000070 "mitotic sister chromatid segregation" evidence=ISS]
[GO:0000228 "nuclear chromosome" evidence=ISS] [GO:0000785
"chromatin" evidence=ISS] [GO:0003680 "AT DNA binding"
evidence=ISS] [GO:0006275 "regulation of DNA replication"
evidence=ISS] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=ISS] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0051301
GO:GO:0006275 GO:GO:0000785 HSSP:P58301 GO:GO:0000070 EMBL:AL844503
GO:GO:0003680 eggNOG:COG1196 SUPFAM:SSF75553
GenomeReviews:AL844503_GR GO:GO:0034990 KO:K06669
RefSeq:XP_001351448.1 ProteinModelPortal:Q8I1U7 IntAct:Q8I1U7
MINT:MINT-1568808 PRIDE:Q8I1U7 EnsemblProtists:PFD0685c:mRNA
GeneID:812569 KEGG:pfa:PFD0685c EuPathDB:PlasmoDB:PF3D7_0414000
HOGENOM:HOG000282685 OMA:CASTINS ProtClustDB:CLSZ2514476
Uniprot:Q8I1U7
Length = 1193
Score = 152 (58.6 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 89/399 (22%), Positives = 184/399 (46%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
+ E + +++E K++ E ++ N +++ +KR E ++ I + + E ++ D+ N L
Sbjct: 785 LNDEVKKLKEELNKIRNEYDDFKNKLELLYQKRNENDSSIYMEE--YEDVDI-DEYNNDL 841
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-H 762
A D + + ++ Y +I+ + E+ + K S + + + KI +L + Q +
Sbjct: 842 ADKKDHSDKIEKEKIHYEQKIREINKEMENVKSSIDKILINEKKHKKKILDLCHQMNQIN 901
Query: 763 EKLALQASLHYEDCKKEV------EHCRKHLSDAKRQAES-IAFITPELEKEFLEMPTTI 815
E+L + KK+V + ++ + K+Q + + +T EL+K + +
Sbjct: 902 EELRILEGKEENIRKKKVLLPQGIQELEEYRTYDKQQLSAKLKSVTMELKKY-----SNV 956
Query: 816 EELEAAIQDNI--SQANSIFFLNQNILQEYEHRQRQIEDLSTKQ----EADKKELKRFLA 869
E +A + NI + N + ++ I +++ + I+ + K+ EA ++ ++ +
Sbjct: 957 NE-KAGDRLNILMNDFNELKKRHEEINSSHKNIKDMIQHIGKKKDEALEATYVKINKYFS 1015
Query: 870 EIDALKEKWLPTLRNLVAQ-INET-FSRNFQEMA---VAGEVSLDEHESDFDKF-GILIK 923
E +L K +LV + +NE + QEM+ + + +DE E DK GI I
Sbjct: 1016 EYFSLLFK--NRKASLVLKKMNEKEYKEKLQEMSEKRIKRRI-IDE-EVYIDKITGISIN 1071
Query: 924 VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 983
+ ++ + SGGERS+ I + L + N F DEI+ +D I+ R
Sbjct: 1072 ITSNDDEKM-TYTIQELSGGERSIVAICLFLCLNKIDNFSFFFFDEIDAALDTIH-RDNL 1129
Query: 984 QQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMN 1022
L++ + T F++T LEYS+ I+ I++
Sbjct: 1130 SLLLKELAHRGTQ--FIITTFRKELLEYSDNMYIVKIVD 1166
Score = 120 (47.3 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 49/212 (23%), Positives = 97/212 (45%)
Query: 23 IIEIELHNFMTFDHLICKPGSR-LNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIG 81
I +I L F T+ + +R +N ++G NGSGKS+++ AI L + + +
Sbjct: 3 IKQIRLKGFRTYKNETTIDFTRGINCIVGFNGSGKSNILLAIEFILSDVCEY--KQIYLH 60
Query: 82 AYVKRGEESGYIKISLRGDTKEEHLTI-------MRKIDTRNKSEWFFNGKVVPKGEVLE 134
+ + Y++I D E++ ++ ++K+ K E F N K + K + +E
Sbjct: 61 EGIGNAVRNCYVEIIF--DNSEKYFSMFKESEIKIKKVLENMKCEIFVNDKNISKNQYVE 118
Query: 135 ITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVG----DPQLPVQHCALVEKS 190
+ + + +NNL + Q ++ + + + ++L + +G + + L E
Sbjct: 119 LLESCGLCINNLYNIIKQGQIIKLSNMKDEEILNYLKSILGAKIFEEKKKDALSMLKECD 178
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVE 222
SK TIE K D ++L++L E E +E
Sbjct: 179 SKKVTIE---KEFNDMNSKLESLQEEFENFLE 207
Score = 86 (35.3 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 37/202 (18%), Positives = 95/202 (47%)
Query: 651 IEDEAAKLQKEREEIINIVQIEK------RKRREMENHINLRKRKLESIEKEDDINTALA 704
I+++ K + + I NI QI + K + +++ I +++++E+ K ++IN L+
Sbjct: 308 IKEKNIKESQNKNRIKNINQINEFILRVNEKLQSLKSDIVSKEKQIEN--KNNEINMLLS 365
Query: 705 KLVDQAADLNIQQFKYAIE--IKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLK 760
K ++ D N IE I ++ +E+ + + EK++ +E ++K+ L ++K
Sbjct: 366 KNKNKNTDANYSHNVKKIEKMINDINIELSFLEKETIKNEKYLKELEEESKV--LNKSIK 423
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
++E L+ + + + E C + +++ E++ + +E+ +E+
Sbjct: 424 ENETLSQKYGSEINELNNKSEKCVEQKRQCQQKISEGTTNLNEIKCQIIEVNDKYDEIIK 483
Query: 821 AIQDNISQANSIFFLNQNILQE 842
+ I + + ++I +E
Sbjct: 484 SSNKEILKIVDLIMAEKSIKRE 505
Score = 79 (32.9 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 50/261 (19%), Positives = 116/261 (44%)
Query: 646 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDD-INTALA 704
T ++ D +KL+ +EE N ++ +K ++ ++ L + ++I +E + + L
Sbjct: 183 TIEKEFNDMNSKLESLQEEFENFLEYKKLEKEKVHLDYFLNEINYKNIYEETQMLKSKLQ 242
Query: 705 KLVDQAAD----LNIQ---QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+L ++ D LN+ + +Y ++ + +EI SC+ ++ K +I D + +
Sbjct: 243 ELKNKTQDEDNHLNLSNNNKSEYNEKLNKMKLEIASCQ-NHLNK---TISEDIQNKR--- 295
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
N+ H ++ + + ++ K+ + + + + E I + +L+ + + I
Sbjct: 296 NIV-HLQMLIDEKIKEKNIKESQN--KNRIKNINQINEFILRVNEKLQS----LKSDIVS 348
Query: 818 LEAAIQDNISQANSIFFLNQNILQE--YEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
E I++ ++ N + N+N + Y H ++IE + EL FL +
Sbjct: 349 KEKQIENKNNEINMLLSKNKNKNTDANYSHNVKKIEKMINDINI---ELS-FLEKETIKN 404
Query: 876 EKWLPTLRNLVAQINETFSRN 896
EK+L L +N++ N
Sbjct: 405 EKYLKELEEESKVLNKSIKEN 425
Score = 75 (31.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 46/213 (21%), Positives = 93/213 (43%)
Query: 659 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA-DLNIQQ 717
+ E E +N +++E +NH+N K E I+ + +I L L+D+ + NI++
Sbjct: 262 KSEYNEKLNKMKLEIAS---CQNHLN--KTISEDIQNKRNI-VHLQMLIDEKIKEKNIKE 315
Query: 718 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 777
+ IKN+ +I EK + S++ D +E + K +E L + ++
Sbjct: 316 SQNKNRIKNIN-QINEFILRVNEK-LQSLKSDIVSKEKQIENKNNEINMLLSKNKNKNTD 373
Query: 778 KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ 837
H K + ++ I LEKE ++ ++ELE + N N+
Sbjct: 374 ANYSHNVKKI---EKMINDINIELSFLEKETIKNEKYLKELE----EESKVLNKSIKENE 426
Query: 838 NILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 870
+ Q+Y ++ + S K K++ ++ ++E
Sbjct: 427 TLSQKYGSEINELNNKSEKCVEQKRQCQQKISE 459
Score = 62 (26.9 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 55/243 (22%), Positives = 100/243 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
MQT ++++E K ++ + N + K + +N++K + + +I L
Sbjct: 541 MQTAKKIVEFIEKKREERTSKEFNFKEFYFGKLTIVPL-LNIKKFNEFNYPNDKNI-VPL 598
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVE-IVSCKWSYAEKHMASIEFDAK-IRELEFNLKQ 761
K V+ + I +F I K ++V+ + SC+ +Y E + + D + + F
Sbjct: 599 IKCVNYNS--KIYEFLKNILFKTIIVKSLESCE-NYLEDNYNCVNIDGDYLSKHGFMYGG 655
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
+ K Y K+ E +K S + +I I EL + +T+ +
Sbjct: 656 YNKKKYGIYTVYNKLKELKEEEKKEKSHIEELNNNIEKIDDELRNIYDTKSSTVAKKNGC 715
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
S NSI N NI E+ + E ++ QE K+ L++ D LK + L
Sbjct: 716 A----STINSI---NNNIYSNEENIRLTSEKINYIQEK-KQNLEQHK---DQLKMQILQ- 763
Query: 882 LRN 884
LRN
Sbjct: 764 LRN 766
Score = 59 (25.8 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 25/99 (25%), Positives = 47/99 (47%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL-----KDMEDKNNKLL 424
K+++L ++ + N KSE + LN+ KL + C + L +D+++K N ++
Sbjct: 240 KLQELKNKTQDEDNHLNLSNNNKSEYNEKLNKMKLEIASCQNHLNKTISEDIQNKRN-IV 298
Query: 425 HALRNSGAENIFEAYCWLQQHRHEL-NKEAYGPVLLEVN 462
H L+ E I E Q+++ + N +L VN
Sbjct: 299 H-LQMLIDEKIKEKNIKESQNKNRIKNINQINEFILRVN 336
Score = 52 (23.4 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 21/107 (19%), Positives = 52/107 (48%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 431
+K GS+I EL ++ + QK + ++ +++ L + ++ ++ DK ++++ ++S
Sbjct: 430 QKYGSEINELNNKSEKCVEQKRQCQQKISEGTTNLNEIKCQIIEVNDKYDEII---KSSN 486
Query: 432 AENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN---RAHANYLEDH 475
E I + + + + G ++ +NV +A LE+H
Sbjct: 487 KE-ILKIVDLIMAEKSIKRENILGFLIDNINVDKTYVKAVDTILENH 532
Score = 50 (22.7 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 23/85 (27%), Positives = 37/85 (43%)
Query: 836 NQNILQEYEHR--QRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETF 893
N N+ + + I L+ + + K+EL + E D K K L L + NE
Sbjct: 766 NNNVNPDESEKVGSTDINSLNDEVKKLKEELNKIRNEYDDFKNK----LELLYQKRNEND 821
Query: 894 SRNFQEMAVAGEVSLDEHESDF-DK 917
S + E +V +DE+ +D DK
Sbjct: 822 SSIYMEEYE--DVDIDEYNNDLADK 844
Score = 49 (22.3 bits), Expect = 2.2e-14, Sum P(4) = 2.2e-14
Identities = 25/111 (22%), Positives = 41/111 (36%)
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXX 259
+ R + L LK+ V +EK +E +L K +++KK E +
Sbjct: 332 ILRVNEKLQSLKSDIVSKEKQIENKNNEINMLLSKNKNKNTDANYSHNVKKIEKMINDIN 391
Query: 260 XXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDC--KKLSSLINE-NSK 307
N + E K K+I + + +K S INE N+K
Sbjct: 392 IELSFLEKETIKNEKYLKELEEESKVLNKSIKENETLSQKYGSEINELNNK 442
Score = 48 (22.0 bits), Expect = 5.4e-14, Sum P(4) = 5.4e-14
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 383 VQANQKRLQ-KSEKEKILNQNKLTLRQCSDRLKD--MEDKNNKLL-HALRNSGAENIFEA 438
+ +N++ ++ SEK + + K L Q D+LK ++ +NN + G+ +I
Sbjct: 726 IYSNEENIRLTSEKINYIQEKKQNLEQHKDQLKMQILQLRNNNVNPDESEKVGSTDINSL 785
Query: 439 YCWLQQHRHELNK 451
+++ + ELNK
Sbjct: 786 NDEVKKLKEELNK 798
Score = 48 (22.0 bits), Expect = 6.8e-14, Sum P(4) = 6.8e-14
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 208 NQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKA 251
N+LK L E++K+ + + +EK++ + + YD K +
Sbjct: 668 NKLKELKEEEKKEKSHIEELNNNIEKIDDELRNI----YDTKSS 707
>TAIR|locus:2167973 [details] [associations]
symbol:SMC2 "AT5G62410" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0000796 "condensin
complex" evidence=ISS] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006260 "DNA replication"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0010389 "regulation of G2/M transition of mitotic
cell cycle" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0031047 "gene silencing by RNA" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] [GO:0035196 "production
of miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] [GO:0051607 "defense
response to virus" evidence=RCA] [GO:0051726 "regulation of cell
cycle" evidence=RCA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0005215 GO:GO:0006310
GO:GO:0030261 EMBL:AB015469 EMBL:AB019235 GO:GO:0000796
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 EMBL:AF271730 EMBL:AF271731 EMBL:AF306547
IPI:IPI00534765 RefSeq:NP_201047.1 UniGene:At.19029 HSSP:P32908
ProteinModelPortal:Q9C5Y4 SMR:Q9C5Y4 STRING:Q9C5Y4 PaxDb:Q9C5Y4
PRIDE:Q9C5Y4 EnsemblPlants:AT5G62410.1 GeneID:836362
KEGG:ath:AT5G62410 TAIR:At5g62410 HOGENOM:HOG000163792
InParanoid:Q9C5Y4 OMA:CQNGKIP PhylomeDB:Q9C5Y4
ProtClustDB:CLSN2685173 Genevestigator:Q9C5Y4 Uniprot:Q9C5Y4
Length = 1175
Score = 146 (56.5 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 63/336 (18%), Positives = 151/336 (44%)
Query: 659 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQF 718
+ E+E+++ + K+++ +E+H+ + ++ ++ E D A + + D ++ +
Sbjct: 814 ENEKEKLVMEEEAMKQEQSSLESHLTSLETQISTLTSEVDEQRAKVDALQKIHDESLAEL 873
Query: 719 KYA-IEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 777
K ++K +I S + EK + K+ +++ K+ E ++ ++DC
Sbjct: 874 KLIHAKMKECDTQI-SGFVTDQEKCLQ------KLSDMKLERKKLENEVVRMETDHKDCS 926
Query: 778 KEVEHC-RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLN 836
+V+ KH A + + + + E + E+LE D + N
Sbjct: 927 VKVDKLVEKHTWIASEK-QLFGKGGTDYDFESCDPYVAREKLEKLQSDQSGLEKRV---N 982
Query: 837 QNILQEYEHRQRQIEDLSTKQ---EADKKELKRFLAEIDALKEKWLPTLRNLVAQINETF 893
+ ++ +E + + L +K+ E DK ++ + + E+D K++ TL+ ++N+ F
Sbjct: 983 KKVMAMFEKAEDEYNALISKKNTIENDKSKITKVIEELDEKKKE---TLKVTWVKVNQDF 1039
Query: 894 SRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYL 953
F + L+ E G+ ++V F G++ S SGG+RS+ + +
Sbjct: 1040 GSIFSTLLPGTMAKLEPPEDGNFLDGLEVRVAF---GKVWKQSLSELSGGQRSLLALSLI 1096
Query: 954 VSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRA 989
++L P ++DE++ +D ++ + +++RA
Sbjct: 1097 LALLLFKPAPLYILDEVDAALD-LSHTQNIGRMIRA 1131
Score = 142 (55.0 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 65/304 (21%), Positives = 127/304 (41%)
Query: 22 NIIEIELHNFMTFDHLICKPG--SRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
+I EI L F ++ G N + G NGSGKS+++ +I LG RA +
Sbjct: 2 HIKEICLEGFKSYATRTVVSGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAAN 61
Query: 80 IGAYVKRGEESGYIK--ISLRGDTKEEH-----------LTIMRKIDTRNKSEWFFNGKV 126
+ V + ++G K +S+ D E H +T+ R+I ++++ NGK+
Sbjct: 62 LQELVYKQGQAGITKATVSVTFDNSERHRSPLGYEEHPEITVTRQIVVGGRNKYLINGKL 121
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
+V + + VNN + Q R+ + + P ++L E+A G + A
Sbjct: 122 AQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYENKKEAA 181
Query: 187 VEKSSKLKTIECTVKR--NGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
++ K +T + + + + L L+ L E+ + ++ AEL +++ ++
Sbjct: 182 LKTLEKKQTKVDEINKLLDHEILPALEKLRKEKSQYMQWANGNAEL-DRLRRFCIAFEYV 240
Query: 245 KYD-MKKAEYIXXXXXXXXXXXXXXXXXNT---LHEFSKPIEGKKQEK-AILDGDCKKLS 299
+ + ++ + T + EF K I+ Q K A + G+ K LS
Sbjct: 241 QAEKIRDNAVLGVGEMKAKLGKIDAETEKTQEEIQEFEKQIKALTQAKEASMGGEVKTLS 300
Query: 300 SLIN 303
++
Sbjct: 301 EKVD 304
Score = 82 (33.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 43/194 (22%), Positives = 82/194 (42%)
Query: 663 EEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAI 722
E++ ++ Q R+ ++ N + + E++EK L K V + A + + A
Sbjct: 301 EKVDSLAQEMTRESSKLNNKEDTLLGEKENVEKIVHSIEDLKKSVKERAAAVKKSEEGAA 360
Query: 723 EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRE---LEFNLKQHEKLAL-QASLHYEDCKK 778
++K E+ + ++H + + E LE L+ K+A+ A + K
Sbjct: 361 DLKQRFQELSTTLEECEKEHQGVLAGKSSGDEEKCLEDQLRD-AKIAVGTAGTELKQLKT 419
Query: 779 EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQN 838
++EHC K L + K Q S E+E E +E ++ A++ + L ++
Sbjct: 420 KIEHCEKELKERKSQLMSKLEEAIEVENELGARKNDVEHVKKALESIPYNEGQMEALEKD 479
Query: 839 ILQEYEHRQRQIED 852
E E QR +ED
Sbjct: 480 RGAELEVVQR-LED 492
Score = 81 (33.6 bits), Expect = 8.7e-08, Sum P(3) = 8.7e-08
Identities = 54/226 (23%), Positives = 101/226 (44%)
Query: 653 DEAAKLQKEREEIINIVQIEKRKRREMENHIN-LR--KRKLESIEKEDDINTALAKLVDQ 709
D KL + E + +Q +++ ++E+ I L+ + K + + ++ T L +
Sbjct: 671 DRLRKLH-DLAEAESELQGHQKRLADVESQIKELQPLQMKFTDVYAQLELKTYDLSLFLK 729
Query: 710 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQ 768
A+ N + K +K L E+ K EK +A FDA + +LE ++K H+K +
Sbjct: 730 RAEQN-EHHKLGEAVKKLEEELEEAKSQIKEKELAYKNCFDA-VSKLENSIKDHDKNR-E 786
Query: 769 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ 828
L +D +K ++ + + A + +S E EKE L M EE EA Q+ S
Sbjct: 787 GRL--KDLEKNIKTIKAQMQAASKDLKS-----HENEKEKLVM----EE-EAMKQEQSSL 834
Query: 829 ANSIFFLNQNI---LQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 871
+ + L I E + ++ +++ L + ELK A++
Sbjct: 835 ESHLTSLETQISTLTSEVDEQRAKVDALQKIHDESLAELKLIHAKM 880
Score = 71 (30.1 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 42/193 (21%), Positives = 87/193 (45%)
Query: 648 QRLIED-EAAKLQKEREEII--NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
++L E+ E AK Q + +E+ N + +++H R+ +L+ +EK +I T A
Sbjct: 744 KKLEEELEEAKSQIKEKELAYKNCFDAVSKLENSIKDHDKNREGRLKDLEK--NIKTIKA 801
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE---------FDAKIREL 755
++ QAA +++ + E + E + + S E H+ S+E D + ++
Sbjct: 802 QM--QAASKDLKSHENEKEKLVMEEEAMKQEQSSLESHLTSLETQISTLTSEVDEQRAKV 859
Query: 756 EFNLKQH-EKLALQASLH--YEDCKKEV-------EHCRKHLSDAKRQAESIAFITPELE 805
+ K H E LA +H ++C ++ E C + LSD K + + + +E
Sbjct: 860 DALQKIHDESLAELKLIHAKMKECDTQISGFVTDQEKCLQKLSDMKLERKKLENEVVRME 919
Query: 806 KEFLEMPTTIEEL 818
+ + +++L
Sbjct: 920 TDHKDCSVKVDKL 932
Score = 68 (29.0 bits), Expect = 8.1e-09, Sum P(4) = 8.1e-09
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLV 707
++ +++ ++L + EE I V+ E R+ H+ K+ LESI + AL K
Sbjct: 425 EKELKERKSQLMSKLEEAIE-VENELGARKNDVEHV---KKALESIPYNEGQMEALEK-- 478
Query: 708 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE 740
D+ A+L + Q + +++ L ++ + +++Y++
Sbjct: 479 DRGAELEVVQ-RLEDKVRGLSAQLANFQFTYSD 510
Score = 67 (28.6 bits), Expect = 8.1e-09, Sum P(4) = 8.1e-09
Identities = 38/195 (19%), Positives = 77/195 (39%)
Query: 752 IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAE----SIAFITPELEK- 806
+ E E L+ H+K E KE++ + +D Q E ++ E+
Sbjct: 679 LAEAESELQGHQKRLADV----ESQIKELQPLQMKFTDVYAQLELKTYDLSLFLKRAEQN 734
Query: 807 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
E ++ +++LE +++ SQ +N + I+D +E K+L++
Sbjct: 735 EHHKLGEAVKKLEEELEEAKSQIKEKELAYKNCFDAVSKLENSIKDHDKNREGRLKDLEK 794
Query: 867 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVS-LDEHESDFD-KFGILIKV 924
I +K + ++L + NE +E A+ E S L+ H + + + L
Sbjct: 795 ---NIKTIKAQMQAASKDLKSHENEKEKLVMEEEAMKQEQSSLESHLTSLETQISTLTSE 851
Query: 925 KFRQSGQLEVLSAHH 939
Q +++ L H
Sbjct: 852 VDEQRAKVDALQKIH 866
Score = 65 (27.9 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 34/138 (24%), Positives = 65/138 (47%)
Query: 763 EKLALQASLH-YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
EK ++ +H ED KK V ++ + K+ E A +L++ F E+ TT+EE E
Sbjct: 327 EKENVEKIVHSIEDLKKSV---KERAAAVKKSEEGAA----DLKQRFQELSTTLEECEKE 379
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQR--------QIEDLSTKQEADKKELKRFLAEIDA 873
Q ++ +S + L++ + +++ L TK E +KELK +++ +
Sbjct: 380 HQGVLAGKSSGD--EEKCLEDQLRDAKIAVGTAGTELKQLKTKIEHCEKELKERKSQLMS 437
Query: 874 LKEKWLPTLRNLVAQINE 891
E+ + L A+ N+
Sbjct: 438 KLEEAIEVENELGARKND 455
Score = 57 (25.1 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 36/195 (18%), Positives = 90/195 (46%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
+ E+ ++E+EA K ++ E ++ +E + + + ++ ++ K+++++K D + A
Sbjct: 816 EKEKLVMEEEAMKQEQSSLES-HLTSLETQIST-LTSEVDEQRAKVDALQKIHDESLAEL 873
Query: 705 KLVD-QAADLNIQQFKYAIEIKNLLVEIVSCKWSYA--EKHMASIEFDAKIRELEFN--L 759
KL+ + + + Q + + + L ++ K E + +E D K ++ + +
Sbjct: 874 KLIHAKMKECDTQISGFVTDQEKCLQKLSDMKLERKKLENEVVRMETDHKDCSVKVDKLV 933
Query: 760 KQHEKLALQASLHYED-CKKEVEHCRKHLSDAKRQAESIAFITPELEKEF-LEMPTTIEE 817
++H +A + L + + E C ++ A+ + E + LEK ++ E+
Sbjct: 934 EKHTWIASEKQLFGKGGTDYDFESCDPYV--AREKLEKLQSDQSGLEKRVNKKVMAMFEK 991
Query: 818 LEAAIQDNISQANSI 832
E IS+ N+I
Sbjct: 992 AEDEYNALISKKNTI 1006
Score = 43 (20.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/134 (20%), Positives = 56/134 (41%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
+K+EKL S L + N+K + EK + N L ++ + +++ + K K++ L
Sbjct: 965 EKLEKLQSDQSGLEKRVNKKVMAMFEKAED-EYNALISKK--NTIENDKSKITKVIEELD 1021
Query: 429 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAH-ANYLEDHVGH-YIWKSFIT 486
E + + + Q + + ++ + + LE V +WK ++
Sbjct: 1022 EKKKETLKVTWVKVNQDFGSIFSTLLPGTMAKLEPPEDGNFLDGLEVRVAFGKVWKQSLS 1081
Query: 487 Q-DAGDRDFLAKNL 499
+ G R LA +L
Sbjct: 1082 ELSGGQRSLLALSL 1095
Score = 42 (19.8 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 152 QDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
Q+ + EF K +K L + ++A ++ L EK L E T R LN +
Sbjct: 271 QEEIQEFEK--QIKALTQAKEASMGGEVKT----LSEKVDSLAQ-EMT--RESSKLNNKE 321
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
+ ++++VE++ E L+K S+K++ +K
Sbjct: 322 DTLLGEKENVEKIVHSIEDLKK--SVKERAAAVK 353
Score = 40 (19.1 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
+ +EK+ I +L ++ + E+ K ++ S L++ E ++ +L A +
Sbjct: 329 ENVEKIVHSIEDLKKSVKERAAAVKKSEEGAADLKQRFQELSTTLEECEKEHQGVL-AGK 387
Query: 429 NSGAE 433
+SG E
Sbjct: 388 SSGDE 392
Score = 39 (18.8 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 373 KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED 418
KLG + +L + + + Q EKE L + C D + +E+
Sbjct: 738 KLGEAVKKLEEELEEAKSQIKEKE-------LAYKNCFDAVSKLEN 776
Score = 38 (18.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 418 DKNNKLLHALRNSGAENIFEAYCWL 442
D + + L SG NI ++ C++
Sbjct: 24 DPHFNAITGLNGSGKSNILDSICFV 48
>UNIPROTKB|O93309 [details] [associations]
symbol:smc3 "Structural maintenance of chromosomes protein
3" species:8355 "Xenopus laevis" [GO:0000785 "chromatin"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=ISS]
[GO:0030893 "meiotic cohesin complex" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
GO:GO:0000775 GO:GO:0051301 GO:GO:0007067 GO:GO:0006275
GO:GO:0006281 GO:GO:0000785 GO:GO:0051276 SUPFAM:SSF75553
GO:GO:0030893 HOVERGEN:HBG039849 EMBL:BC094474 EMBL:AF051785
UniGene:Xl.290 UniGene:Xl.75355 ProteinModelPortal:O93309
IntAct:O93309 Uniprot:O93309
Length = 1209
Score = 159 (61.0 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 86/367 (23%), Positives = 158/367 (43%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGTITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 755
+ IN + + ++ L+I K +E K+L+ + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTLARSEGLDITIDKTEVESKDLVKSMD--RWKNMEKDHMDAINHDTK--EL 922
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQEYEHRQRQIEDLST-----KQEADKKELKR 866
+ A+ N S+ Q +E + + I +L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQ---EELDRGHKSIMELMNVLELRKYEAIQLTFKQ 1035
Query: 867 FLAEIDALKEKWLPTLR-NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF-GILIKV 924
+ +K +P + LV + + Q+ GE S D+F G+ I+V
Sbjct: 1036 VSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQD---EGEGSTQSSVPSVDQFTGVGIRV 1092
Query: 925 KFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQ 984
F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D + + +
Sbjct: 1093 SFTGK-QAEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSD 1151
Query: 985 QLVRAAS 991
++ AS
Sbjct: 1152 MIMELAS 1158
Score = 117 (46.2 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 94/453 (20%), Positives = 168/453 (37%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR D +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--DKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRMD 311
L + + K +E + K K+S++ E + +
Sbjct: 235 TRAKLDELSSKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKSKISAMKEEKEQLSSE 294
Query: 312 FLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY-EPPHDK 370
E++ K K +LK R Q A EP
Sbjct: 295 RQEQIKQRTKLEL-KTKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFSS 353
Query: 371 I-EKLGSQILELGVQANQKRLQ-------------KSEKEKILNQNKLTLRQCSDRLKDM 416
+ +K S I L QA Q+R K E++K + + +L Q + K
Sbjct: 354 VKQKEESGIARLA-QATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQ 412
Query: 417 EDKNNKLLHALRNSGAENIFEAYCWLQQHRHEL 449
NK L + +N+ E Y L Q +E+
Sbjct: 413 IAAINKDLEETEVNKEKNL-EQYTKLDQDLNEV 444
Score = 74 (31.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 44/244 (18%), Positives = 105/244 (43%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 698
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 699 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGTITRVET 830
Query: 758 NLKQHEKLAL-QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 816
L ++ + L Q + + E E L+ + E+I + + TI+
Sbjct: 831 YLNENLRKRLDQVEQELNELR-ETEGGTV-LTATTSELEAINKRVKDTLARSEGLDITID 888
Query: 817 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEA---DKKELKRFLAEIDA 873
+ E +D + + + ++ + H +++E ++ +Q K+E + + E+ +
Sbjct: 889 KTEVESKDLVKSMDRWKNMEKDHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGS 948
Query: 874 LKEK 877
L ++
Sbjct: 949 LPQE 952
Score = 70 (29.7 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 803 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 862
EL+K+ ++ + LEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKVEDELHALEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 863 ELKRFLAEIDALKEK 877
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 56 (24.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 20/132 (15%), Positives = 57/132 (43%)
Query: 186 LVEKSSKLKTIECTVKRNGDT-LNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
L+ + +++T + K + D+ L+++K L ++++ + + L+ +E+ +
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXXXNT-LHEFSKPIEGKKQEKAILDGDCKKLSSLIN 303
+ +K N + + + E+ L+G ++ + +N
Sbjct: 774 RESLKAELGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGTITRVETYLN 833
Query: 304 ENSKRRMDFLEK 315
EN ++R+D +E+
Sbjct: 834 ENLRKRLDQVEQ 845
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 15/62 (24%), Positives = 36/62 (58%)
Query: 192 KLKTIECTV---KRNGDTLNQ-LKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
+LK+++ + KR +N+ L+ V +EK++E+ + + L +V++ ++L Y+
Sbjct: 398 ELKSLDQAINDKKRQIAAINKDLEETEVNKEKNLEQYTKLDQDLNEVKTRVEELDKKYYE 457
Query: 248 MK 249
+K
Sbjct: 458 VK 459
Score = 40 (19.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 184 CALVEKSSKLK---TIECTVKRNGDTLNQLKALN----------VEQEKDVERVRQRAEL 230
C +E S++L T++C + GD ++ AL +E +KDV +V
Sbjct: 633 CRSMEVSTQLARAFTMDC-ITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKVEDELHA 691
Query: 231 LE-KV-ESMKKKL 241
LE K+ E++++ +
Sbjct: 692 LEAKLNENLRRNI 704
>ZFIN|ZDB-GENE-030131-105 [details] [associations]
symbol:smc2 "structural maintenance of chromosomes
2" species:7955 "Danio rerio" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 ZFIN:ZDB-GENE-030131-105 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 GeneTree:ENSGT00550000074857
PANTHER:PTHR18937:SF9 EMBL:BX548248 IPI:IPI00500731
Ensembl:ENSDART00000008616 ArrayExpress:F1R0P1 Bgee:F1R0P1
Uniprot:F1R0P1
Length = 1232
Score = 138 (53.6 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 74/345 (21%), Positives = 147/345 (42%)
Query: 653 DEAAKLQKEREEIINIVQIE----KRKRREMENHINLRKRKLESIEKEDDINTALAKLVD 708
D +K KE+++ + V +E KR++ E I L++++++ D T
Sbjct: 808 DAFSKRLKEKQQEADAVALELEELKREQAGYEQQIQAVDEALKAVQEQIDNMTTEVSANK 867
Query: 709 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKH-MASIEFDA--KIRELEFNLKQHEKL 765
+A + + Q K + + + ++ + K E + + DA KI+ELE N+ +H+K
Sbjct: 868 EA--VRVAQEKLSQQKEVIMGQEREIKGKSGEANRLREQNNDAQLKIKELEHNISKHKKD 925
Query: 766 ALQASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
+ A+ E + KHL A P KE + +EE + ++
Sbjct: 926 SADATAKVARMLAENDWISSEKHLFGQPNTAYDFKTNNP---KEAGQRLKRLEETKDKLE 982
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 883
N+++ N+L E E R ++ E DK ++ + E+D K + L
Sbjct: 983 RNVNRRA------MNMLSEAEERYNDLKKKKRIVENDKAKILETIEELDQKKNEAL---- 1032
Query: 884 NLVAQ-INETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS-GQLEVLSAHHQS 941
N+ Q +N+ F F + L E G+L ++F+ + G + S
Sbjct: 1033 NVAWQKVNKDFGSIFSTLLPGANARLAPPEG----CGVLDGLEFKVALGNTWKENLTELS 1088
Query: 942 GGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
GG+RS+ + ++++ P ++DE++ +D + + + Q L
Sbjct: 1089 GGQRSLVALSLILAMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1133
Score = 119 (46.9 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 54/209 (25%), Positives = 98/209 (46%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISLRGDTK- 102
N + G NGSGKS+++ +I LG RAT++ V + +G K +S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRATNLQDLVYKNGLAGITKATVSITFDNSN 87
Query: 103 --------EEH--LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
E H +TI R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFETHDEITITRQVVIGGRNKYLINGVNANNLRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKA 212
R+ + + P ++L E+A G + C +K S KTIE K++ L +++
Sbjct: 148 GRITKVLNMKPPEILAMIEEAAGTR---MYEC---KKISAQKTIE---KKDAK-LKEIQT 197
Query: 213 -LNVEQEKDVERVRQ-RAELLEKVESMKK 239
L+ E +E++++ RA LE + M++
Sbjct: 198 ILDEEITPAMEKLKEERASYLEYQKLMRE 226
Score = 82 (33.9 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 46/255 (18%), Positives = 113/255 (44%)
Query: 677 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 736
+++++ + ++ +L ++E E L+ L A + +Q K +++K I+ K
Sbjct: 682 KDIQDSLRNKEAELSAVESE------LSGLKGTAEKIRYRQLKQQLDLKTEEARILETKL 735
Query: 737 SYAEKHMASIEFD---AKIRELEFNLKQHEKLALQASLHYE-----------DCKKEVEH 782
+ H E + I E E L++ +++ +A Y + +KE++
Sbjct: 736 QQSSFHKQQEELENLRKTIEECEDTLQKTKEVQKKAEEKYNVLENKMKNAAAEREKELKA 795
Query: 783 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 842
++ L+ AK +A++ + E ++E + +EEL+ ++ I Q + +
Sbjct: 796 AQQKLNQAKSKADAFSKRLKEKQQEADAVALELEELK---REQAGYEQQI----QAVDEA 848
Query: 843 YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAV 902
+ Q QI++++T+ A+K+ ++ ++ KE + R + + E + +E
Sbjct: 849 LKAVQEQIDNMTTEVSANKEAVRVAQEKLSQQKEVIMGQEREIKGKSGE--ANRLREQNN 906
Query: 903 AGEVSLDEHESDFDK 917
++ + E E + K
Sbjct: 907 DAQLKIKELEHNISK 921
Score = 67 (28.6 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 29/142 (20%), Positives = 65/142 (45%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI--EKEDDINTALAKLVDQ 709
++E L+K EE + +Q K +++ E N+ + K+++ E+E ++ A KL +Q
Sbjct: 744 QEELENLRKTIEECEDTLQKTKEVQKKAEEKYNVLENKMKNAAAEREKELKAAQQKL-NQ 802
Query: 710 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 769
A F ++ K + V+ + ++ A ++ +I+ ++ LK ++
Sbjct: 803 AKS-KADAFSKRLKEKQQEADAVALELEELKREQAG--YEQQIQAVDEALKAVQEQIDNM 859
Query: 770 SLHYEDCKKEVEHCRKHLSDAK 791
+ K+ V ++ LS K
Sbjct: 860 TTEVSANKEAVRVAQEKLSQQK 881
Score = 64 (27.6 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 28/103 (27%), Positives = 49/103 (47%)
Query: 376 SQILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA 432
++ILE +Q + Q+ E E K + + + TL++ + K E+K N L + ++N+ A
Sbjct: 728 ARILETKLQQSSFHKQQEELENLRKTIEECEDTLQKTKEVQKKAEEKYNVLENKMKNAAA 787
Query: 433 ENIFEAYCWLQQHRHELNK-EAYGPVLLEVNVSNRAHANYLED 474
E E Q+ +K +A+ L E A A LE+
Sbjct: 788 EREKELKAAQQKLNQAKSKADAFSKRLKEKQQEADAVALELEE 830
Score = 46 (21.3 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 387 QKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 438
+K L K+ E +K+++ + + + +RLK ++++ K AL A+ F+A
Sbjct: 331 RKELVKNMEEDKKVMSAKEAEVAKAVERLKAVKEEGQKDAEALE--AAQQHFKA 382
Score = 45 (20.9 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 19/86 (22%), Positives = 43/86 (50%)
Query: 167 LEETEKAVGDPQLPVQHCA--LVEKSSKLKTIECTVKRNGDT---LNQ-LKALNVEQEK- 219
+ + E Q+ ++H L K +++K ++ K++ DT +N+ ++ L E +K
Sbjct: 409 ISKAETEAKQAQMKLKHAQQELKTKQAQVKKMDSGYKKDQDTFEAVNKCIEKLQAEMKKL 468
Query: 220 DVERVRQRAELLEKVESMKKKLPWLK 245
+ E R+ LLE+ +++ L+
Sbjct: 469 NYEDGREEC-LLEQKRQFSREVIQLR 493
Score = 45 (20.9 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 38/171 (22%), Positives = 73/171 (42%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
+R +E G + LR T EE L+ +++DT+ +S + K + + TK+ V
Sbjct: 287 RRDKEVGGV---LR--TLEETLSEAQRVDTKAQS-----ALDLKKQNLKDETKKRKELVK 336
Query: 145 NLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDP-QLPVQHCALVEKSSKLKTIECTVKRN 203
N+ + D+ AK + V E KAV + Q + AL K + + N
Sbjct: 337 NMEE----DKKVMSAKEAEVAKAVERLKAVKEEGQKDAE--ALEAAQQHFKAVSAGLSAN 390
Query: 204 GDTLNQ-LKALNVEQEKDVERVRQRAELLE-KVESMKKKLPWLKYDMKKAE 252
D L + + D+ + A+ + K++ +++L + +KK +
Sbjct: 391 EDGAEATLSGQMMTCKNDISKAETEAKQAQMKLKHAQQELKTKQAQVKKMD 441
Score = 44 (20.5 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 11/56 (19%), Positives = 30/56 (53%)
Query: 383 VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 438
+Q Q + K ++ + QN+ +++ S ++++E + +K + + + E + EA
Sbjct: 253 LQEMQSSIAKLQEN--MKQNEAKVKELSAEIQELERRRDKEVGGVLRTLEETLSEA 306
Score = 43 (20.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 14/74 (18%), Positives = 34/74 (45%)
Query: 181 VQHCALVEKSSKLKTIECTVKRNGDTLNQLKALN--VEQEKDVERVRQRAELLEKVESMK 238
+Q + ++ +L+ + T++ DTL + K + E++ +V + + E+ + +K
Sbjct: 735 LQQSSFHKQQEELENLRKTIEECEDTLQKTKEVQKKAEEKYNVLENKMKNAAAEREKELK 794
Query: 239 KKLPWLKYDMKKAE 252
L KA+
Sbjct: 795 AAQQKLNQAKSKAD 808
Score = 40 (19.1 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 209 QLKALNVEQEKD---VERVRQRA----ELLEKVESMKKKLPWLKYDMKKAE 252
++K LN E ++ +E+ RQ + +L E ES+ + P L+++ E
Sbjct: 464 EMKKLNYEDGREECLLEQKRQFSREVIQLREAYESLMGQFPNLRFEYTDPE 514
Score = 39 (18.8 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 427 LRNSGAENIFEAYCWL 442
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
>TAIR|locus:2045159 [details] [associations]
symbol:TTN7 "AT2G27170" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0007059 "chromosome
segregation" evidence=ISS;IMP] [GO:0008278 "cohesin complex"
evidence=ISS] [GO:0000785 "chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0007062 "sister chromatid
cohesion" evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 EMBL:CP002685 GO:GO:0005819 GO:GO:0000785
GO:GO:0003682 HSSP:P01096 GO:GO:0016363 EMBL:AC007154 EMBL:AC007290
GO:GO:0008278 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
PROSITE:PS51131 EMBL:AJ504805 EMBL:AY525642 EMBL:AK220965
EMBL:AK221283 EMBL:AK226305 EMBL:AK229499 IPI:IPI00549149
PIR:F84669 RefSeq:NP_001077968.1 RefSeq:NP_180285.4
UniGene:At.28786 ProteinModelPortal:Q56YN8 SMR:Q56YN8 STRING:Q56YN8
PRIDE:Q56YN8 EnsemblPlants:AT2G27170.1 EnsemblPlants:AT2G27170.2
GeneID:817259 KEGG:ath:AT2G27170 TAIR:At2g27170
HOGENOM:HOG000166512 InParanoid:Q56YN8 KO:K06669 OMA:NKVLEHF
PhylomeDB:Q56YN8 ProtClustDB:CLSN2692426 Genevestigator:Q56YN8
Uniprot:Q56YN8
Length = 1204
Score = 118 (46.6 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 45/236 (19%), Positives = 106/236 (44%)
Query: 23 IIEIELHNFMTFDHLICKP--GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ + +++N V+G NGSGKS+ AI L Q L R+
Sbjct: 3 IKQVIIEGFKSYKEQVATEEFSNKVNCVVGANGSGKSNFFHAIRFVLSDIYQNL-RSEDR 61
Query: 81 GAYVKRGEE----SGYIKISL-RGDTK----EEHLTIMRKIDTRNKSEWFFNGKVVPKGE 131
A + G S +++I D + +E + + R + + K ++F +GK + KGE
Sbjct: 62 HALLHEGAGHQVVSAFVEIVFDNSDNRFPVDKEEIRLRRTVGLK-KDDYFLDGKHITKGE 120
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
V+ + + N + Q ++ + ++ L+ K +G ++ + +
Sbjct: 121 VMNLLESAGFSRANPYYVVQQGKIASLTLMKDIERLDLL-KEIGGTRVYEER-----RRE 174
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
L+ ++ T + + + L+ E+ ++++ ++ ++++ +K L + YD
Sbjct: 175 SLRIMQETGNKRKQIIEVVHYLD-ERLRELDEEKEELRKYQQLDKQRKSLEYTIYD 229
Score = 105 (42.0 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 54/250 (21%), Positives = 107/250 (42%)
Query: 660 KEREEIINI-VQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVD--QAADLNIQ 716
+ERE++ + +I+ K ++ + +R+ E E +I T L + + QA +I
Sbjct: 782 EEREQLSKLNPEIKDLKEKKFAYQADRIERETRKAELEANIATNLKRRITELQATIASID 841
Query: 717 QFKYAIEIKNLLVEIVSCKWSYAE--KHMASI--EFDAKIRELEFNLKQHEKLALQASLH 772
E+ K S E K + S+ D K ++++ +K EK L+ +L
Sbjct: 842 DDSLPSSAGTKEQELDDAKLSVNEAAKELKSVCDSIDEKTKQIK-KIKD-EKAKLK-TLE 898
Query: 773 YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM-PTTIEELEAAIQDNISQANS 831
+DCK ++ K L + ++ E K+ + P + + + + NI +
Sbjct: 899 -DDCKGTLQDLDKKLEELFSLRNTLLAKQDEYTKKIRGLGPLSSDAFDTYKRKNIKELQK 957
Query: 832 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 891
+ LQ++ H ++ D ++EL+ AE+DA EK + L + +E
Sbjct: 958 MLHRCSEQLQQFSHVNKKALDQYVNFTEQREELQNRQAELDAGDEKIKELITVLDQRKDE 1017
Query: 892 TFSRNFQEMA 901
+ R F+ +A
Sbjct: 1018 SIERTFKGVA 1027
Score = 95 (38.5 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 912 ESDFDKF-GILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEI 970
E +K+ G+ +KV F G+ +++ SGG+++V + + ++Q PF + DEI
Sbjct: 1072 EGRVEKYIGVKVKVSFTGQGETQLMK--QLSGGQKTVVALALIFAIQRCDPAPFYLFDEI 1129
Query: 971 NQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDL 1009
+ +DP R L+R + Q +T P+L
Sbjct: 1130 DAALDP-QYRTAVGNLIRRLADDYGTQ--FITTTFRPEL 1165
Score = 94 (38.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 62/307 (20%), Positives = 134/307 (43%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+++ +L +E+EE+ Q++K+ R+ +E I K ++ EK + + A K +++
Sbjct: 196 LDERLRELDEEKEELRKYQQLDKQ-RKSLEYTI-YDKELHDAREKLEQVEVARTKASEES 253
Query: 711 ADLNIQQFKYAIEIKNL---LVEIVS-CKWSYAEKHMASIEFDAKIRE---LEFNLKQHE 763
+ + K + K+L L E+ + Y EK + +++ LE ++K +
Sbjct: 254 TKMYDRVEKAQDDSKSLDESLKELTKELQTLYKEKETVEAQQTKALKKKTKLELDVKDFQ 313
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIA-FITPELEKEFLEMPTTIEELEAAI 822
D +++ + + D+ R+ E+I +++KE + I ELE +
Sbjct: 314 DRITGNIQSKNDALEQLNTVEREMQDSLRELEAIKPLYESQVDKEN-QTSKRINELEKTL 372
Query: 823 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL 882
SI + Q ++ ++ + D ++E + +LKR L + + ++E+ L
Sbjct: 373 --------SILYQKQGRATQFSNKAAR--DKWLRKEIE--DLKRVL-DSNTVQEQ---KL 416
Query: 883 RNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSG 942
++ + ++N + E EV + E ES K L K R+ + E + G
Sbjct: 417 QDEILRLNTDLTER-DEHIKKHEVEIGELESRISKSHELFNTKKRERDE-EQRKRKEKWG 474
Query: 943 GERSVST 949
E +S+
Sbjct: 475 EESQLSS 481
Score = 87 (35.7 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 52/240 (21%), Positives = 105/240 (43%)
Query: 652 EDEAAKLQKEREEIINIVQ-IEKRKRR-EMENHINLRKR-KLESIEKE--DDINTALAKL 706
+D++ L + +E+ +Q + K K E + L+K+ KLE K+ D I +
Sbjct: 264 QDDSKSLDESLKELTKELQTLYKEKETVEAQQTKALKKKTKLELDVKDFQDRITGNIQSK 323
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK-QHEKL 765
D LN + E+++ L E+ + K Y + + +I ELE L ++K
Sbjct: 324 NDALEQLNTVER----EMQDSLRELEAIKPLYESQVDKENQTSKRINELEKTLSILYQKQ 379
Query: 766 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 825
+A+ ++ + RK + D KR +S +L+ E L + T + E + I+ +
Sbjct: 380 G-RATQFSNKAARD-KWLRKEIEDLKRVLDSNTVQEQKLQDEILRLNTDLTERDEHIKKH 437
Query: 826 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 885
+ + + + ++R+ ++ K++ E + +EID LK + +NL
Sbjct: 438 EVEIGELESRISKSHELFNTKKRERDEEQRKRKEKWGEESQLSSEIDKLKTELERAKKNL 497
Score = 82 (33.9 bits), Expect = 7.0e-11, Sum P(3) = 7.0e-11
Identities = 52/199 (26%), Positives = 90/199 (45%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRK--RK-LESIEKEDDINTALA-KLV 707
E++ +K E E+ ++I+ ++ + + N K RK +E +++ D NT KL
Sbjct: 358 ENQTSKRINELEKTLSILYQKQGRATQFSNKAARDKWLRKEIEDLKRVLDSNTVQEQKLQ 417
Query: 708 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL-EFNLKQHEKLA 766
D+ LN + IK VEI + ++ H F+ K RE E K+ EK
Sbjct: 418 DEILRLNTDLTERDEHIKKHEVEIGELESRISKSHEL---FNTKKRERDEEQRKRKEKWG 474
Query: 767 LQASLHYE-D-CKKEVEHCRKHLS-----DAKRQAESIAFITPE--LEKEF---LEMPTT 814
++ L E D K E+E +K+L D +R SI I + + F +E+
Sbjct: 475 EESQLSSEIDKLKTELERAKKNLDHATPGDVRRGLNSIRRICADYRINGVFGPLVELVDC 534
Query: 815 IEELEAAIQDNISQANSIF 833
E+ A++ ++ NS+F
Sbjct: 535 DEKFFTAVE--VTAGNSLF 551
Score = 82 (33.9 bits), Expect = 7.0e-11, Sum P(3) = 7.0e-11
Identities = 50/231 (21%), Positives = 103/231 (44%)
Query: 679 MEN--HINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCK 735
M+N IN ++++LE + ++ I+ + +LV + L ++++ L EI +
Sbjct: 674 MQNTKSINEKEKELEDVRRQLQVIDQQITQLVTEQQRLEADWTLCKLQVEQLKQEIANAN 733
Query: 736 WSYAEKHMASIEFDAKIR-ELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQA 794
H A IE+ K+ ++ + Q +++S+ ++ + E HL+ +R
Sbjct: 734 KQKHAIHKA-IEYKEKLLGDIRTRIDQ-----VRSSMSMKEAEMGTELV-DHLTPEER-- 784
Query: 795 ESIAFITPEL----EKEF------LEMPTTIEELEAAIQDNIS------QANSIFFLNQN 838
E ++ + PE+ EK+F +E T ELEA I N+ QA + +
Sbjct: 785 EQLSKLNPEIKDLKEKKFAYQADRIERETRKAELEANIATNLKRRITELQATIASIDDDS 844
Query: 839 ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQI 889
+ ++++++D KELK ID K K + +++ A++
Sbjct: 845 LPSSAGTKEQELDDAKLSVNEAAKELKSVCDSIDE-KTKQIKKIKDEKAKL 894
Score = 77 (32.2 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 33/186 (17%), Positives = 82/186 (44%)
Query: 740 EKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAF 799
EK + + ++ + + E+ L+A + CK +VE ++ +++A +Q +I
Sbjct: 684 EKELEDVRRQLQVIDQQITQLVTEQQRLEAD--WTLCKLQVEQLKQEIANANKQKHAIHK 741
Query: 800 ITPELEKEFLEMPTTIEELEAAIQDNISQANS--IFFLNQNILQEYEHRQRQIEDLSTKQ 857
EK ++ T I+++ +++ ++ + + L ++ +I+DL K+
Sbjct: 742 AIEYKEKLLGDIRTRIDQVRSSMSMKEAEMGTELVDHLTPEEREQLSKLNPEIKDLKEKK 801
Query: 858 ---EADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 914
+AD+ E + AE++A L+ + ++ T + + + ++ E E D
Sbjct: 802 FAYQADRIERETRKAELEA---NIATNLKRRITELQATIA-SIDDDSLPSSAGTKEQELD 857
Query: 915 FDKFGI 920
K +
Sbjct: 858 DAKLSV 863
Score = 69 (29.3 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 30/140 (21%), Positives = 64/140 (45%)
Query: 778 KEVEHCRKHLSDAKRQAESIAFITPEL--EKEFLEMPTTIEELEAA-IQDNISQANSIFF 834
K + K L D +RQ + I +L E++ LE T+ +L+ ++ I+ AN
Sbjct: 678 KSINEKEKELEDVRRQLQVIDQQITQLVTEQQRLEADWTLCKLQVEQLKQEIANANK--- 734
Query: 835 LNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA-LKEKWLPTLRNLVAQINETF 893
I + E++++ + D+ T+ + + + AE+ L + P R ++++N
Sbjct: 735 QKHAIHKAIEYKEKLLGDIRTRIDQVRSSMSMKEAEMGTELVDHLTPEEREQLSKLNPEI 794
Query: 894 SRNFQEMAVAGEVSLDEHES 913
++ +E A + E E+
Sbjct: 795 -KDLKEKKFAYQADRIERET 813
Score = 48 (22.0 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 189 KSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVE 235
K+ L+ + + D+L +L+A+ E V++ Q ++ + ++E
Sbjct: 323 KNDALEQLNTVEREMQDSLRELEAIKPLYESQVDKENQTSKRINELE 369
Score = 46 (21.3 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 8/27 (29%), Positives = 21/27 (77%)
Query: 207 LNQLKALNVEQEKDVERVRQRAELLEK 233
+ K++N E+EK++E VR++ +++++
Sbjct: 674 MQNTKSIN-EKEKELEDVRRQLQVIDQ 699
Score = 43 (20.2 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 395 KEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
K K + + + L +CS++L+ N K L
Sbjct: 948 KRKNIKELQKMLHRCSEQLQQFSHVNKKAL 977
Score = 43 (20.2 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 34/138 (24%), Positives = 60/138 (43%)
Query: 645 QTEQ-RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
+T+Q + I+DE AKL+ ++ +Q +K E+ +LR L K+D+ +
Sbjct: 880 KTKQIKKIKDEKAKLKTLEDDCKGTLQDLDKKLEEL---FSLRNTLLA---KQDEYTKKI 933
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
L ++D +K IK L + C S + + + A + + F ++ E
Sbjct: 934 RGLGPLSSDA-FDTYKRK-NIKELQKMLHRC--SEQLQQFSHVNKKALDQYVNFTEQREE 989
Query: 764 KLALQASLHYEDCK-KEV 780
QA L D K KE+
Sbjct: 990 LQNRQAELDAGDEKIKEL 1007
Score = 41 (19.5 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 194 KTIECTV--KRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
K++E T+ K D +L+ + V + K E + + +EK + K L
Sbjct: 221 KSLEYTIYDKELHDAREKLEQVEVARTKASEESTKMYDRVEKAQDDSKSL 270
Score = 41 (19.5 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 13/68 (19%), Positives = 32/68 (47%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
L E+ +K E + +++ L N ++ + E R+R E + + ++ L
Sbjct: 427 LTERDEHIKKHEVEIGELESRISKSHELFNTKKRERDEEQRKRKEKWGEESQLSSEIDKL 486
Query: 245 KYDMKKAE 252
K ++++A+
Sbjct: 487 KTELERAK 494
Score = 40 (19.1 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 272 NTLHEFSKPIEGKKQEKA---ILDGDCK 296
+++ E +K I+ K EKA L+ DCK
Sbjct: 875 DSIDEKTKQIKKIKDEKAKLKTLEDDCK 902
Score = 40 (19.1 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 395 KEKILNQNKLTLRQCSDRLK---DMEDKNNKLLHALRNSGAE 433
KE+ L+ KL++ + + LK D D+ K + +++ A+
Sbjct: 852 KEQELDDAKLSVNEAAKELKSVCDSIDEKTKQIKKIKDEKAK 893
>UNIPROTKB|E1C610 [details] [associations]
symbol:E1C610 "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0000796 "condensin
complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00823281
Ensembl:ENSGALT00000037611 ArrayExpress:E1C610 Uniprot:E1C610
Length = 1173
Score = 130 (50.8 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 77/348 (22%), Positives = 148/348 (42%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESI---EKEDDINTALAKL 706
I++ KL +++ + + K K++E+E + L + K E ++ + A+A L
Sbjct: 791 IKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 850
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL-EFNLKQHEKL 765
+Q + L + K +KN E+ S K AE+ AKI + E N + H
Sbjct: 851 KEQVSALEAEAVKTRESLKNAENELSSEKGLMAERTKDIKAKSAKIEKYREQNNEIHRNY 910
Query: 766 ALQASLHYEDCKKE---VEHCRKHLSDAKRQA-ESIAFITPELEKEF-LEMPT-TIEELE 819
+ +E +K ++ K L + K A E F + +F P T ++L+
Sbjct: 911 FKEGD-QWEKKQKHSDVMDKLDKLLKEYKWIASEKELFGQADTTYDFEANNPKETGQKLQ 969
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 879
+ S+ N+L E E +R+ DL K+ + + + LA I+ L K
Sbjct: 970 KLLTKKEKLEKSLNMRAMNLLSEAE--ERKYNDLMKKKRIVENDKIKILATIEELDRKKN 1027
Query: 880 PTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS-GQLEVLSAH 938
L ++N+ F F + + L + K IL ++FR G + +
Sbjct: 1028 KALHIAWEKVNKDFGSIFSMLLPGAKAMLVPSK----KQNILDGLEFRVGLGDIWKENLT 1083
Query: 939 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
SGG+RS++ + ++++ P ++DE++ +D + + + Q L
Sbjct: 1084 ELSGGQRSLAALSLILAILLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 118 (46.6 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 52/226 (23%), Positives = 104/226 (46%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISLRGDTKE 103
N + G NGSGKS+++ +I LG RA+S+ V + ++G K +S+ D +
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDLVYKNGQAGVNKATVSITFDNSD 87
Query: 104 -----------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFL-- 150
+ +TI R++ ++++ NG V ++ + VNN FL
Sbjct: 88 KKNSPLGFENNDEITITRQVIVGGRNKYLINGMNASNNRVQDLFGSVGLNVNN-PHFLIM 146
Query: 151 PQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
Q ++ + + P ++L E+A G + C K + KTIE + L+++
Sbjct: 147 QQGQITKVLNMKPTEILAMIEEAAGTR---MYECM---KITAHKTIE----KKESKLDEI 196
Query: 211 KALNVEQ-EKDVERVRQ-RAELLEKVESMKKKLPWLKYDMKKAEYI 254
+ + E+ +E++++ RA LE + M +++ L+ +Y+
Sbjct: 197 RRIITEEISPTLEKLKEARASYLE-YQKMTREVENLRRIYVAFQYV 241
Score = 83 (34.3 bits), Expect = 3.3e-08, Sum P(4) = 3.3e-08
Identities = 62/266 (23%), Positives = 109/266 (40%)
Query: 677 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 736
R+ E+ + ++ +LE+ EKE LA L + A Q K E+K+ E++ K
Sbjct: 682 RDAEDELKIKTSQLEATEKE------LANLKNMAE--KYQHLKQQWEMKSEEAELLQTKI 733
Query: 737 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCK-----------KEVEH 782
+ H + A I E E LK+ E+ +A Y+ + KE+++
Sbjct: 734 QQSAYHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKALENKMKNAEAERGKEIKN 793
Query: 783 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL--EAAIQDNISQA--NSIFFLNQN 838
++ L+ AK++A+ + E ++E + +E+L E A S+A +I L +
Sbjct: 794 AQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASLKEQ 853
Query: 839 ILQEYEHRQRQIEDLSTKQEADKKELKRFLAE-IDALKEKWLPTLRNLVAQINETFSRNF 897
+ + E L + E K +AE +K K + Q NE RN+
Sbjct: 854 VSALEAEAVKTRESLKNAENELSSE-KGLMAERTKDIKAK-SAKIEKYREQNNE-IHRNY 910
Query: 898 QEMAVAGEVSLDEHESDFDKFGILIK 923
+ E +H DK L+K
Sbjct: 911 FKEGDQWEKK-QKHSDVMDKLDKLLK 935
Score = 67 (28.6 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 35/162 (21%), Positives = 77/162 (47%)
Query: 384 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENI-FEAYCWL 442
QAN+K++ +S E N+ K+ ++ + ++++ E KNN++ + +E + F+
Sbjct: 258 QANKKKIFESMAE---NEKKV--KELAQQIEETEKKNNEVRGLFKVLMSEILYFQLLFVC 312
Query: 443 QQHRHELNKEAYGPVLLEVN-VSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKN-LK 500
+ L E ++EV + ++ +L VG ++ K + + K+ ++
Sbjct: 313 VSDKMHLKWEILMTSVMEVEKIIDKNAEQHLHLIVGQFVQKDAVRDSIKGLTEIQKDYIR 372
Query: 501 --PFD---VPILNYVSNESSRKEPFQISEEMRALG-ISARLD 536
PF P+L SN +SR+ PF + G ++++L+
Sbjct: 373 CFPFAHQAEPMLT-ASNNASRRAPFLVGSLRTCNGKVTSKLN 413
Score = 66 (28.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
E + I T ++ D + +LK EQE + + +Q + L E ES++ K P+
Sbjct: 446 EDQEAFEAIRKTKEKLQDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKHPY 505
Query: 244 LKYDMKKAE 252
L+++ K E
Sbjct: 506 LRFEYKNPE 514
Score = 52 (23.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 37/155 (23%), Positives = 67/155 (43%)
Query: 105 HLT-IMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLT---QFLPQ--DRVCEF 158
H+T I+ K+ T +E ++ K LE T++ + N+ Q L Q + E
Sbjct: 670 HVTPILSKLKTMRDAE----DELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEE 725
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQ 217
A+L K+ + + L ++ + E LK E + +R + + KAL N +
Sbjct: 726 AELLQTKIQQSAYHKQQEDLLALKK-TIAECEETLKKTEES-QRKAE--EEYKALENKMK 781
Query: 218 EKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ ER ++ +K+ S KKK MK+ +
Sbjct: 782 NAEAERGKEIKNAQQKLNSAKKKADDSSRKMKEKQ 816
Score = 46 (21.3 bits), Expect = 7.3e-11, Sum P(3) = 7.3e-11
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
+++L+ +Q Q K ++E +L K T+ +C + LK E+ K
Sbjct: 726 AELLQTKIQ--QSAYHK-QQEDLLALKK-TIAECEETLKKTEESQRK 768
Score = 45 (20.9 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 13/82 (15%), Positives = 39/82 (47%)
Query: 796 SIAFITPELEKEFLEMPTTIEELEAAIQD-NISQANSIFFLNQNILQEYEHRQRQIEDLS 854
+I+ I +++ ++ + ++ E D + + F + ++ + ++++
Sbjct: 413 NISSIKAQMKLKYAQQELKTKQAEVKKMDGSYKEDQEAFEAIRKTKEKLQDEMKKLKYEE 472
Query: 855 TKQEADKKELKRFLAEIDALKE 876
+QEA + K+ +EI +L+E
Sbjct: 473 AEQEAHLAKKKQLSSEISSLRE 494
Score = 44 (20.5 bits), Expect = 3.3e-08, Sum P(4) = 3.3e-08
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 652 EDEAA--KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE 694
ED+ A ++K +E++ + +++K K E E +L K+K S E
Sbjct: 446 EDQEAFEAIRKTKEKLQD--EMKKLKYEEAEQEAHLAKKKQLSSE 488
Score = 38 (18.4 bits), Expect = 0.00071, Sum P(4) = 0.00071
Identities = 29/111 (26%), Positives = 42/111 (37%)
Query: 782 HCRKHLSDAK--RQAES-IAFITPELE---KEFLEMPTTIEELEAAIQDNISQANSIFFL 835
H LS K R AE + T +LE KE + E+ + Q ++ L
Sbjct: 670 HVTPILSKLKTMRDAEDELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEEAELL 729
Query: 836 NQNILQEYEHRQRQIEDLST--KQEADKKELKRFLAEIDALKEKWLPTLRN 884
I Q H+Q+ EDL K A+ +E + E E+ L N
Sbjct: 730 QTKIQQSAYHKQQ--EDLLALKKTIAECEETLKKTEESQRKAEEEYKALEN 778
>POMBASE|SPAC10F6.09c [details] [associations]
symbol:psm3 "mitotic cohesin complex subunit Psm3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000794 "condensed nuclear chromosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005694 "chromosome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IMP] [GO:0008278 "cohesin complex" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISM] [GO:0030892 "mitotic cohesin
complex" evidence=NAS] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 PomBase:SPAC10F6.09c Pfam:PF02463
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR GO:GO:0016887 GO:GO:0016567 GO:GO:0000790
GO:GO:0000794 GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0030892 HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF PIR:T37503
RefSeq:NP_593260.1 ProteinModelPortal:O42649 IntAct:O42649
STRING:O42649 EnsemblFungi:SPAC10F6.09c.1 GeneID:2543010
KEGG:spo:SPAC10F6.09c OrthoDB:EOG4TB7KF NextBio:20804043
Uniprot:O42649
Length = 1194
Score = 134 (52.2 bits), Expect = 5.6e-13, Sum P(3) = 5.6e-13
Identities = 73/366 (19%), Positives = 152/366 (41%)
Query: 654 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAAD 712
EA K E E N+ + E+ + + + +L S+++ L + ++
Sbjct: 811 EARKTALEYELNTNLYLRRNPLKAEIGSDNRIDESELNSVKRSLLKYENKLQIIKSSSSG 870
Query: 713 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLH 772
L Q + EI + E+ S + + IE DAKI E N + L +
Sbjct: 871 LEEQMQRINSEISDKRNELESLE-ELQHEVATRIEQDAKINER--NAAKRSLLLARK--- 924
Query: 773 YEDCKKEVEHCRKHLSDAKRQA--ESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 830
++C +++ K L +A + ++ + + K+ ++ +++ + + Q N
Sbjct: 925 -KECNEKI----KSLGVLPEEAFIKYVSTSSNAIVKKLHKINEALKDYGSVNKKAYEQFN 979
Query: 831 SIFFLNQNIL---QEYEHRQRQIEDLST-----KQEADKKELKRFLAEIDALKEKWLPTL 882
+ ++L +E Q I +L+T K EA ++ K+ + K +P
Sbjct: 980 NFTKQRDSLLARREELRRSQESISELTTVLDQRKDEAIERTFKQVAKSFSEIFVKLVPAG 1039
Query: 883 RN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF-GILIKVKFRQSGQLEVLSAHHQ 940
R LV S++ E ++ ++ +S D + GI I+V F E L+ +
Sbjct: 1040 RGELVMNRRSELSQSI-EQDISMDIDTPSQKSSIDNYTGISIRVSFNSKDD-EQLNINQL 1097
Query: 941 SGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFL 1000
SGG++S+ + + ++Q PF ++DE + +D R +V+ S+ + C
Sbjct: 1098 SGGQKSLCALTLIFAIQRCDPAPFNILDECDANLDA-QYRSAIAAMVKEMSKTSQFICTT 1156
Query: 1001 LTPKLL 1006
P+++
Sbjct: 1157 FRPEMV 1162
Score = 122 (48.0 bits), Expect = 5.6e-13, Sum P(3) = 5.6e-13
Identities = 54/241 (22%), Positives = 110/241 (45%)
Query: 23 IIEIELHNFMTF-DHLICKPGS-RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I +I + F ++ D+ + +P S N+++G NGSGKS+ AI L L R
Sbjct: 3 ITKIVIQGFKSYKDYTVIEPLSPHHNVIVGRNGSGKSNFFAAIRFVLSDAYTHLSREER- 61
Query: 81 GAYVKRGEE----SGYIKISL-----RGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGE 131
A + G S Y++++ R T + + + R I + K E+ + K V K E
Sbjct: 62 QALLHEGPGATVMSAYVEVTFANADNRFPTGKSEVVLRRTIGLK-KDEYSLDKKTVSKTE 120
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
V+ + + +N +PQ RV + LE ++ G Q+ A +S+
Sbjct: 121 VINLLESAGFSRSNPYYIVPQGRVTSLTNAKDSERLELLKEVAGT-QIYENRRA---ESN 176
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKA 251
K+ ++ T++++ + +++L E+ +++E + + K ++ ++ L + Y +
Sbjct: 177 KI--MDETIQKS-EKIDELLQYIEERLRELEEEKNDLAVYHKKDNERRCLEYAIYSREHD 233
Query: 252 E 252
E
Sbjct: 234 E 234
Score = 66 (28.3 bits), Expect = 3.4e-05, Sum P(4) = 3.4e-05
Identities = 33/133 (24%), Positives = 63/133 (47%)
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 830
+ + D ++ +E CR S+ + + I +L+K L + E ++D +
Sbjct: 678 IKFSDLQESLEKCR---SEIESFDQKITACLDDLQKAQLSLKQ-FERDHIPLKDELV--- 730
Query: 831 SIFFLNQNILQEYEHRQRQIE----DLST-KQEADKKELKRFLA-EIDALKEKWLPTLRN 884
+I ++ + H+ R +E +L T +Q+A+ +LK L+ E+D L K + L++
Sbjct: 731 TITGETTDLQESMHHKSRMLELVVLELHTLEQQAN--DLKSELSSEMDELDPKDVEALKS 788
Query: 885 LVAQINETFSRNF 897
L QI E S F
Sbjct: 789 LSGQI-ENLSHEF 800
Score = 63 (27.2 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQ--EKDVERVRQRAELLEKVESMKKKLPW 243
L K S+ K IE +++ GD ++QL A N+ E+ +R L + +K +
Sbjct: 427 LKAKLSRKKEIEISLESQGDRMSQLLA-NITSINERKENLTDKRKSLWREEAKLKSSIEN 485
Query: 244 LKYDMKKAE 252
+K D+ ++E
Sbjct: 486 VKDDLSRSE 494
Score = 59 (25.8 bits), Expect = 5.6e-13, Sum P(3) = 5.6e-13
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENI 435
SQ+L N+++ ++K K L + + L+ + +KD ++ K L + N
Sbjct: 449 SQLLANITSINERKENLTDKRKSLWREEAKLKSSIENVKDDLSRSEKALGTTMDRNTSNG 508
Query: 436 FEAYCWLQQHRHELNKEAY-GPVLLEVNVSNR 466
A ++ L E Y GP+ V NR
Sbjct: 509 IRA---VKDIAERLKLEGYYGPLCELFKVDNR 537
Score = 56 (24.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 362 PAYEPPHDKIEKL----GSQILEL-----GVQANQKRLQKSEK---EKILNQNKLT--LR 407
P Y P ++ L S+ LEL G Q + R +S K E I K+ L+
Sbjct: 135 PYYIVPQGRVTSLTNAKDSERLELLKEVAGTQIYENRRAESNKIMDETIQKSEKIDELLQ 194
Query: 408 QCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN 450
+RL+++E++ N L + E + ++H E+N
Sbjct: 195 YIEERLRELEEEKNDLAVYHKKDNERRCLEYAIYSREH-DEIN 236
Score = 49 (22.3 bits), Expect = 3.4e-05, Sum P(4) = 3.4e-05
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 644 MQTEQRLIEDEA-AKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
++TE +E+E AKL +++E I++ R + + N ++ +RK +K +
Sbjct: 416 LKTEYDEMENELKAKLSRKKEIEISLESQGDRMSQLLANITSINERKENLTDKRKSLWRE 475
Query: 703 LAKL 706
AKL
Sbjct: 476 EAKL 479
Score = 44 (20.5 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 18/69 (26%), Positives = 37/69 (53%)
Query: 363 AYEPPHDKIEKLGSQILELGVQANQKRLQKSEK-EKILN--QNKLTLRQCSDRL-KDME- 417
A+ ++IE++ ++I EL R++K + E N ++K+ L S +L + +E
Sbjct: 259 AFIQREERIERIKAEITELNHSLELLRVEKQQNDEDYTNIMKSKVALELQSSQLSRQIEF 318
Query: 418 ---DKNNKL 423
D+++KL
Sbjct: 319 SKKDESSKL 327
Score = 42 (19.8 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 25/115 (21%), Positives = 47/115 (40%)
Query: 359 QTVPAYEPPHDKIEKLGSQILELGV---QANQKRLQ-KSEKEKILNQNKLTLRQCSDRLK 414
+T E H K L +LEL QAN + + SE +++ ++ L+ S +++
Sbjct: 735 ETTDLQESMHHKSRMLELVVLELHTLEQQANDLKSELSSEMDELDPKDVEALKSLSGQIE 794
Query: 415 DMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAY---GPVLLEVNVSNR 466
++ + + ++ + A Y ELN Y P+ E+ NR
Sbjct: 795 NLSHEFDAIIKERAHIEARKTALEY--------ELNTNLYLRRNPLKAEIGSDNR 841
Score = 37 (18.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 18/105 (17%), Positives = 44/105 (41%)
Query: 135 ITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK-LLEETEKAVGDPQLPVQHCALVEKSSKL 193
I R + ++N++ L QDR+ + + E+ + ++ + + E + L
Sbjct: 227 IYSREHDEINSVLDALEQDRIAALERNDDDSGAFIQREERI--ERIKAE---ITELNHSL 281
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMK 238
+ + ++N + + V E ++ ++ E +K ES K
Sbjct: 282 ELLRVEKQQNDEDYTNIMKSKVALELQSSQLSRQIEFSKKDESSK 326
>UNIPROTKB|Q97QG7 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 EMBL:AE005672
GenomeReviews:AE005672_GR GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 HOGENOM:HOG000036392 KO:K03529 TIGRFAMs:TIGR02168
HSSP:Q9X0R4 OMA:GDITKFI PIR:G95144 RefSeq:NP_345712.1
ProteinModelPortal:Q97QG7 EnsemblBacteria:EBSTRT00000025640
GeneID:931760 KEGG:spn:SP_1247 PATRIC:19706887
ProtClustDB:CLSK877065 Uniprot:Q97QG7
Length = 1179
Score = 172 (65.6 bits), Expect = 7.6e-13, Sum P(3) = 7.6e-13
Identities = 69/351 (19%), Positives = 162/351 (46%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIEKRKRREMENHINLRKRKLESIE-KEDDINT 701
+++ + I++ LQ+E + + +++ +KR E+ + L K +L++++ ++++I
Sbjct: 790 IKSNKNAIQERYQNLQEELAQARLLKTELQGQKRYEVADIERLGK-ELDNLDFEQEEIQR 848
Query: 702 ALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNL-- 759
L + +D ++ + E + + + K + + ++ ++ +L
Sbjct: 849 LLQEKIDNLEKVDTELLSQQAEESK--TQKTNLQQGLIRKQFELDDIEGQLDDIASHLDQ 906
Query: 760 -KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+Q + ++ E K++V +HL I++ T LEK E+ +
Sbjct: 907 ARQQNEEWIRKQTRAEAKKEKVSERLRHLQSQLTDQYQISY-TEALEKAH-ELEN-LNLA 963
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE-IDALKEK 877
E ++D S+ +N + +++YE +++ L+++++ D K L E I + ++
Sbjct: 964 EQEVKDLEKAIRSLGPVNLDAIEQYEEVHNRLDFLNSQRD-DILSAKNLLLETITEMNDE 1022
Query: 878 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSA 937
++ I E+F F++M G+ L E D G+ I V+ G+ ++ S
Sbjct: 1023 VKERFKSTFEVIRESFKVTFKQMFGGGQADLILTEGDLLTAGVEISVQ--PPGK-KIQSL 1079
Query: 938 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVR 988
+ SGGE+++S + L S+ + PF ++DE+ +D N ++ L R
Sbjct: 1080 NLMSGGEKALSALALLFSIIRVKTIPFVILDEVEAALDEANVKRFGDYLNR 1130
Score = 107 (42.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 69/306 (22%), Positives = 131/306 (42%)
Query: 651 IEDEAAKLQKEREEIINIVQI-----EKRKRREMENHINLRKRKLESIEKEDDINTALAK 705
I++ A+L+ EE+ + ++ +KR++ E EN L+K++ D+ +AK
Sbjct: 234 IKENKAELESTEEELTQVQELLMSYYQKREKLEEENQ-TLKKQR-------QDLQAEMAK 285
Query: 706 LVDQAADLN--IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
DL I + + + L E V+ A+ +A++E E + K+
Sbjct: 286 DQGSLMDLTSLISDLERKLALSKLESEQVALNQQEAQARLAALEDKRNSLSKEKSDKESS 345
Query: 764 KLALQASLHYEDCK-KEVEHCRKHLSDAKRQAESIA---FITP-ELEKEFLEMPTTIE-E 817
L+ +L + K +E SD Q + F+ + E + T IE E
Sbjct: 346 LALLEGNLVQNNQKLNRLEAELLAFSDDPDQMIELLRERFVALLQEEADVSNQLTRIENE 405
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
LE + Q + QA+ + L + + E +Q E+L T +E ++++ LA+ A+ ++
Sbjct: 406 LENSRQLSQKQADQLEKLKEQLAIAKEKASQQKEELETAKE----QVQKLLADYQAIAKE 461
Query: 878 WLPTLRNLVAQINETFSR-----NFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQL 932
+ AQ ++ F R N Q A + E L H + + +++ K R G +
Sbjct: 462 QEEQKTSYQAQQSQLFDRLDNLKNKQARAQSLENILRNHSNFYAGVKSVLQEKDRLGGII 521
Query: 933 EVLSAH 938
+S H
Sbjct: 522 GAVSEH 527
Score = 95 (38.5 bits), Expect = 7.6e-13, Sum P(3) = 7.6e-13
Identities = 48/232 (20%), Positives = 101/232 (43%)
Query: 25 EIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAY 83
EIE+ F +F D + V+GPNGSGKS++ ++ ALG + R +
Sbjct: 5 EIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGKMPDI 64
Query: 84 VKRGEES----GYIKISLRGDTKE-------EHLTIMRKIDTRNKSEWFFNGKVVPKGEV 132
+ G ES Y + + D + + + + R + SE+ +GK V ++
Sbjct: 65 IFAGTESRKPLNYASVVVTLDNHDGFIKDAGQEIRVERHVYRSGDSEYKIDGKKVRLRDI 124
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
++ + ++ + + Q +V E P + E+A G +++ ++
Sbjct: 125 HDLFLDTGLGRDSFS-IISQGKVEEIFNSKPEERRAIFEEAAG----------VLKYKTR 173
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK---VESMKKKL 241
K E +++ D L++L+ + E + ++ + ++AE K +E +K +
Sbjct: 174 RKETESKLQQTQDNLDRLEDIIYELDNQIKPLEKQAENARKFLDLEGQRKAI 225
Score = 55 (24.4 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 17/72 (23%), Positives = 38/72 (52%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKA--LNVEQEKD--VERVRQR-AELLEKVESMKKKLP 242
+K S L +E + +N LN+L+A L + D +E +R+R LL++ + +L
Sbjct: 341 DKESSLALLEGNLVQNNQKLNRLEAELLAFSDDPDQMIELLRERFVALLQEEADVSNQLT 400
Query: 243 WLKYDMKKAEYI 254
++ +++ + +
Sbjct: 401 RIENELENSRQL 412
Score = 46 (21.3 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESM----KKKLPWLKYDMKKAE 252
++ D NQL + E E + +++A+ LEK++ K+K K +++ A+
Sbjct: 389 LQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLAIAKEKASQQKEELETAK 445
Score = 46 (21.3 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 17/90 (18%), Positives = 42/90 (46%)
Query: 152 QDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
Q+ A L + EK+ + L + LV+ + KL +E + D +Q+
Sbjct: 319 QEAQARLAALEDKRNSLSKEKSDKESSLALLEGNLVQNNQKLNRLEAELLAFSDDPDQM- 377
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + +E+ V +++ A++ ++ ++ +L
Sbjct: 378 -IELLRERFVALLQEEADVSNQLTRIENEL 406
Score = 45 (20.9 bits), Expect = 7.6e-13, Sum P(3) = 7.6e-13
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 390 LQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKNNKL 423
L K E E++ LNQ ++ RL +EDK N L
Sbjct: 306 LSKLESEQVALNQ-----QEAQARLAALEDKRNSL 335
Score = 44 (20.5 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 17/78 (21%), Positives = 42/78 (53%)
Query: 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVER--- 223
LE+ +K + + + +L + + LKT++ + R ++L +K+ EQ + E+
Sbjct: 677 LEQLQKEIAE-----EEASLGSEEATLKTLQDEMARLTESLEAIKSQG-EQARIQEQGLF 730
Query: 224 --VRQRAELLEKVESMKK 239
+Q ++ +E++E++ K
Sbjct: 731 LAYQQTSQQVEELETLWK 748
Score = 43 (20.2 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 189 KSSKLKTIECTVKRNGDTLNQLKA-LNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
K+ L + +K N L + L QE + ++R +L E+ +++KK+ L+ +
Sbjct: 223 KAIYLDVLVAQIKENKAELESTEEELTQVQELLMSYYQKREKLEEENQTLKKQRQDLQAE 282
Query: 248 MKK 250
M K
Sbjct: 283 MAK 285
Score = 38 (18.4 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 15/84 (17%), Positives = 31/84 (36%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
D++ +L + + Q Q R+Q+ Q + + K E++ ++L
Sbjct: 703 DEMARLTESLEAIKSQGEQARIQEQGLFLAYQQTSQQVEELETLWKLQEEEIDRLSEGDW 762
Query: 429 NSGAENIFEAYCWLQQHRHELNKE 452
+ EN E + + L E
Sbjct: 763 QADKENCQERLAAISSDKQNLEAE 786
Score = 37 (18.1 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD 415
E+L +Q+ EL + QKR + E+ + L + + L+ ++ KD
Sbjct: 246 EEL-TQVQELLMSYYQKREKLEEENQTLKKQRQDLQ--AEMAKD 286
Score = 37 (18.1 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 369 DKIEKLGSQILEL--GVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
+++E Q+ +L QA K ++ + Q++L R D LK+ + + L +
Sbjct: 439 EELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQSQLFDRL--DNLKNKQARAQSLENI 496
Query: 427 LRN 429
LRN
Sbjct: 497 LRN 499
>FB|FBgn0027783 [details] [associations]
symbol:SMC2 "SMC2" species:7227 "Drosophila melanogaster"
[GO:0007062 "sister chromatid cohesion" evidence=ISS] [GO:0008278
"cohesin complex" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0000796 "condensin complex" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 EMBL:AE013599 GO:GO:0005524
GO:GO:0005634 GO:GO:0005875 GO:GO:0007052 GO:GO:0022008
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 SUPFAM:SSF75553 GeneTree:ENSGT00550000074857
KO:K06674 PANTHER:PTHR18937:SF9 OMA:CQNGKIP CTD:10592 HSSP:Q9X0R4
EMBL:AF179287 RefSeq:NP_610995.1 UniGene:Dm.2168 SMR:Q7KK96
STRING:Q7KK96 EnsemblMetazoa:FBtr0087461 GeneID:36653
KEGG:dme:Dmel_CG10212 UCSC:CG10212-RA FlyBase:FBgn0027783
InParanoid:Q7KK96 OrthoDB:EOG4P5HR3 GenomeRNAi:36653 NextBio:799708
Uniprot:Q7KK96
Length = 1179
Score = 132 (51.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 48/212 (22%), Positives = 98/212 (46%)
Query: 48 VIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL---------- 97
+ G NGSGKS+++ +I LG RA+++ V + ++G K ++
Sbjct: 30 ITGLNGSGKSNILDSICFVLGISNLQNVRASALQDLVYKNGQAGITKATVTIVFDNTNPA 89
Query: 98 ---RGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDR 154
+G K +++ R++ K+++ NGK+V +V + + VNN + Q +
Sbjct: 90 QCPQGYEKCREISVTRQVVVGGKNKFLINGKLVQNKKVQDFFCSIQLNVNNPNFLIMQGK 149
Query: 155 VCEFAKLSPVKLLEETEKAVGDPQLPVQHCA---LVEKSSKLKTIECTVKRNGDTLNQLK 211
+ + + P ++L E+A G Q + A L+EK + K E V + + L +L
Sbjct: 150 IQQVLNMKPKEVLSMVEEAAGTSQYKTKRDATKTLIEKK-ETKVRETKVLLDEEVLPKLV 208
Query: 212 ALNVEQE--KDVERVRQRAELLEKVESMKKKL 241
L E+ ++ +++ + + L ++ K L
Sbjct: 209 KLRQERSAYQEYQKICRDIDFLIRIHISAKYL 240
Score = 132 (51.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 59/244 (24%), Positives = 109/244 (44%)
Query: 678 EMENHIN-LRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 736
EM + L ++ ++S EK+ T+ AK+VD A L + E+ EI K
Sbjct: 745 EMRERVKTLEQQIIDSREKQ---KTSQAKIVDIEAKLADAKGYRERELNAATNEIKVTK- 800
Query: 737 SYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES 796
AEK A+ K RE EF Q E LQ S+ E KK+ + +L K + ++
Sbjct: 801 QRAEKSRANW----KKREQEFETLQLEITELQKSI--ETAKKQHQEMIDNLEKFKAELDA 854
Query: 797 IAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK 856
+ + E E+ I+E + ++D + + + +L+E + + +++ +
Sbjct: 855 LKVNSSSAASEVTELEQAIKEQKDKLRDQNKEMRNQLVKKEKMLKENQEIELEVKKKENE 914
Query: 857 QE---ADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES 913
Q+ +D KE K+ + ++A K W+P +N N + + ++ AG L + +
Sbjct: 915 QKKISSDAKEAKKRMEALEA-KYPWIPEEKNCFGMKNTRYDYSKEDPHEAGN-KLAKMQE 972
Query: 914 DFDK 917
DK
Sbjct: 973 KKDK 976
Score = 125 (49.1 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 62/327 (18%), Positives = 138/327 (42%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E E LQ E E+ ++ K++ +EM +++ K +L++++ ++A +++ +
Sbjct: 814 EQEFETLQLEITELQKSIETAKKQHQEMIDNLEKFKAELDALKVNS--SSAASEVTELEQ 871
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL 771
+ Q+ K + K + ++V K K IE + K +E E +K++ A
Sbjct: 872 AIKEQKDKLRDQNKEMRNQLV--KKEKMLKENQEIELEVKKKENE-----QKKISSDA-- 922
Query: 772 HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANS 831
++ KK +E + + E P A +Q+ +
Sbjct: 923 --KEAKKRMEALEAKYPWIPEEKNCFGMKNTRYDYS-KEDPHEAGNKLAKMQEKKDKMER 979
Query: 832 IFFLNQNILQEYEHRQRQIEDLSTKQEA---DKKELKRFLAEIDALKEKWLPTLRNLVAQ 888
LN N + + + ++ ++ DK+++K+ + ++D E+ L +
Sbjct: 980 T--LNMNAIMVLDREEENFKETERRRNIVAMDKEKIKKIIVKMD---EEEQDQLNKAATE 1034
Query: 889 INETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVS 948
+N FS F + E L+ ++ G+ IKV F + E L SGG++S+
Sbjct: 1035 VNTNFSGIFSSLLPGAEAKLNPVHTNGCLTGLEIKVGFNGIWK-ESLG--ELSGGQKSLV 1091
Query: 949 TILYLVSLQDLTNCPFRVVDEINQGMD 975
+ ++++ + P ++DE++ +D
Sbjct: 1092 ALSLVLAMLKFSPAPLYILDEVDAALD 1118
Score = 81 (33.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 70/271 (25%), Positives = 116/271 (42%)
Query: 645 QTEQRLIEDEAAKLQKE---REEIINIV--QIEKRKRREMENHINLRKRK-------LES 692
+T Q I D AKL RE +N +I+ K+R ++ N +KR+ LE
Sbjct: 765 KTSQAKIVDIEAKLADAKGYRERELNAATNEIKVTKQRAEKSRANWKKREQEFETLQLEI 824
Query: 693 IEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 752
E + I TA K + D N+++FK E+ L V S E A E K+
Sbjct: 825 TELQKSIETA-KKQHQEMID-NLEKFK--AELDALKVNSSSAASEVTELEQAIKEQKDKL 880
Query: 753 R----ELEFNLKQHEKLALQ-ASLHYEDCKKEVEHCRKHLSDAK---RQAESIAFITPEL 804
R E+ L + EK+ + + E KKE E +K SDAK ++ E++ P +
Sbjct: 881 RDQNKEMRNQLVKKEKMLKENQEIELEVKKKENEQ-KKISSDAKEAKKRMEALEAKYPWI 939
Query: 805 --EKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI-LQEYEHRQRQIEDLSTKQEADK 861
EK M T + + +D N + + + E I L ++E K
Sbjct: 940 PEEKNCFGMKNT--RYDYSKEDPHEAGNKLAKMQEKKDKMERTLNMNAIMVLDREEENFK 997
Query: 862 K-ELKRFLAEIDALKEKWLPTLRNLVAQINE 891
+ E +R + +D KEK ++ ++ +++E
Sbjct: 998 ETERRRNIVAMD--KEK----IKKIIVKMDE 1022
Score = 78 (32.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 48/245 (19%), Positives = 107/245 (43%)
Query: 663 EEIINIVQIEKRKRREMENHINLRKRKLESIE---------KED-DINT-ALAKLVDQAA 711
EE+ I QIEK + RE+++ I ++++ SIE KE+ D+ L ++ A
Sbjct: 674 EELHAIKQIEK-EYREIDSEIAQVEKQIASIENQALAFNKMKENLDLRQHELTMCENRLA 732
Query: 712 DLNIQQFKYAIE-----IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 766
QQ + IE +K L +I+ + ++ +AK+ + + ++ E A
Sbjct: 733 QTTFQQNQAEIEEMRERVKTLEQQIIDSREKQKTSQAKIVDIEAKLADAK-GYRERELNA 791
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 826
A+ + K+ E R + +++ E++ EL+K +E+ ++
Sbjct: 792 --ATNEIKVTKQRAEKSRANWKKREQEFETLQLEITELQKSIETAKKQHQEMIDNLEKFK 849
Query: 827 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLV 886
++ +++ + + E ++ I++ K KE++ L + KEK L + +
Sbjct: 850 AELDALKVNSSSAASEVTELEQAIKEQKDKLRDQNKEMRNQLVK----KEKMLKENQEIE 905
Query: 887 AQINE 891
++ +
Sbjct: 906 LEVKK 910
Score = 68 (29.0 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 51/233 (21%), Positives = 106/233 (45%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKR--REMENHINLRKR-KLESIEKEDDIN 700
++ + IED A + + N+ ++E + +EM+ I+ ++++E +
Sbjct: 249 VEANEHKIEDRIANCKATHAK--NLAEVESIENSVKEMQQQIDAEMGGSIKNLETQLSAK 306
Query: 701 TALAKLVD---QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFD-AKIR-EL 755
AL +AA IQQ + I + + +E E+ +A E D AK++ E
Sbjct: 307 RALEATATGSLKAAQGTIQQDEKKIRMASKNIED-------DERALAKKEADMAKVQGEF 359
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKR-QAESIAFITPELEKEFLEMPTT 814
E +LK+ + +A YED +K++E + LS + +A ++ +++F E TT
Sbjct: 360 E-SLKEADARDSKA---YEDAQKKLEAVSQGLSTNENGEASTLQEQLIVAKEQFSEAQTT 415
Query: 815 IEELEAAIQ---------DNISQANSIFF-----LNQNILQEYEHRQRQIEDL 853
I+ E ++ + +Q N + L+ ++ E ++ +RQ++ L
Sbjct: 416 IKTSEIELRHTRGVLKQREGETQTNDAAYVKDKKLHDQLVVEIKNLERQLQSL 468
Score = 64 (27.6 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 76/330 (23%), Positives = 136/330 (41%)
Query: 646 TE-QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENH-INLRKRKLESIEKEDDINTAL 703
TE ++ I+++ KL+ + +E+ N Q+ K+++ EN I L +K E+ +K+ +
Sbjct: 867 TELEQAIKEQKDKLRDQNKEMRN--QLVKKEKMLKENQEIELEVKKKENEQKKISSDAKE 924
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK--HMASIEFDAKIRELEFNLKQ 761
AK +A + ++ + E KN + + ++ Y+++ H A + AK++E + +++
Sbjct: 925 AKKRMEALEA---KYPWIPEEKNCF-GMKNTRYDYSKEDPHEAGNKL-AKMQEKKDKMER 979
Query: 762 HEKL-ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
+ A+ E+ KE E R ++ K + + I E E++ L T
Sbjct: 980 TLNMNAIMVLDREEENFKETERRRNIVAMDKEKIKKIIVKMDEEEQDQLNKAAT------ 1033
Query: 821 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 880
+ N S S H + L K + K L E+ +K L
Sbjct: 1034 EVNTNFSGIFSSLLPGAEAKLNPVHTNGCLTGLEIKVGFNGI-WKESLGELSG-GQKSLV 1091
Query: 881 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEV-----L 935
L ++A + FS + + EV S G ++K F S L V L
Sbjct: 1092 ALSLVLAMLK--FSP--APLYILDEVDAALDMSHTQNIGSMLKQHFTNSQFLIVSLKDGL 1147
Query: 936 SAH----HQSGGERSVSTILYLVSLQDLTN 961
H ++ E VSTI VS Q TN
Sbjct: 1148 FNHANVLFRTLFEEGVSTITRQVSRQATTN 1177
Score = 54 (24.1 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
D +EK +++ L V ++ + +E E+ + + K LR + +++ K K+L
Sbjct: 843 DNLEKFKAELDALKVNSSSAASEVTELEQAIKEQKDKLRDQNKEMRNQLVKKEKML 898
Score = 53 (23.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 42/238 (17%), Positives = 96/238 (40%)
Query: 655 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLN 714
+AK K+ E + + E + + N + L +E ++ + + +D +
Sbjct: 236 SAKYLKQCETLKTVEANEHKIEDRIANCKATHAKNLAEVESIENSVKEMQQQIDAEMGGS 295
Query: 715 IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAK-IRELEFNLKQHEKLALQASLHY 773
I+ + + K L + A+ +I+ D K IR N++ E+ +
Sbjct: 296 IKNLETQLSAKRALEATATGSLKAAQ---GTIQQDEKKIRMASKNIEDDERALAKKEADM 352
Query: 774 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP-TTIEELEAA-IQDNISQANS 831
+ E E ++ +DA+ +S A+ + + E + +T E EA+ +Q+ + A
Sbjct: 353 AKVQGEFESLKE--ADAR---DSKAYEDAQKKLEAVSQGLSTNENGEASTLQEQLIVAKE 407
Query: 832 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQI 889
F Q ++ E R + ++E + + + L ++ + ++NL Q+
Sbjct: 408 QFSEAQTTIKTSEIELRHTRGVLKQREGETQTNDAAYVKDKKLHDQLVVEIKNLERQL 465
Score = 45 (20.9 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 34/178 (19%), Positives = 65/178 (36%)
Query: 392 KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNK 451
K +K+K+ +QNK Q + K +++ L + + + + R E +
Sbjct: 874 KEQKDKLRDQNKEMRNQLVKKEKMLKENQEIELEVKKKENEQKKISSDAKEAKKRMEALE 933
Query: 452 EAYGPVLLEVNVSNRAHANY---LED-H-VGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
Y + E N + Y ED H G+ + K +D +R + D
Sbjct: 934 AKYPWIPEEKNCFGMKNTRYDYSKEDPHEAGNKLAKMQEKKDKMERTLNMNAIMVLDREE 993
Query: 507 LNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKE 564
N+ E R E+++ + + ++ A EV + G+ SS + E
Sbjct: 994 ENFKETERRRNIVAMDKEKIKKIIVKMDEEEQDQLNKAATEVNTNFSGIFSSLLPGAE 1051
>SGD|S000001927 [details] [associations]
symbol:SMC2 "Subunit of the condensin complex" species:4932
"Saccharomyces cerevisiae" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003680 "AT DNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0000799 "nuclear condensin complex"
evidence=ISS;TAS;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0070058 "tRNA gene clustering" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA;IMP;TAS]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0000217 "DNA secondary
structure binding" evidence=IDA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=TAS] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 SGD:S000001927 Pfam:PF02463 GO:GO:0005739
GO:GO:0005524 GO:GO:0051301 GO:GO:0006281 EMBL:D50617 EMBL:BK006940
GO:GO:0016887 GO:GO:0006310 GO:GO:0003690 GO:GO:0007076
GO:GO:0003680 GO:GO:0000799 GO:GO:0070058 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 EMBL:U05820
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
GO:GO:0000217 HOGENOM:HOG000163792 OrthoDB:EOG4P2T9B PIR:A56157
RefSeq:NP_116687.1 ProteinModelPortal:P38989 SMR:P38989
DIP:DIP-2983N IntAct:P38989 MINT:MINT-435495 STRING:P38989
PaxDb:P38989 EnsemblFungi:YFR031C GeneID:850589 KEGG:sce:YFR031C
CYGD:YFR031c OMA:SECESAE NextBio:966434 Genevestigator:P38989
GermOnline:YFR031C Uniprot:P38989
Length = 1170
Score = 137 (53.3 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 50/212 (23%), Positives = 96/212 (45%)
Query: 44 RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYV-KRGEESGYIKISLR---- 98
+ N + G NGSGKS+++ AI LG + RA+S+ + KRG+ +G K S+
Sbjct: 26 QFNAITGLNGSGKSNILDAICFVLGIASMSTVRASSLQDLIYKRGQ-AGVTKASVTIVFD 84
Query: 99 ---------GDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQF 149
G T +++ R++ S++ NG P+ VL++ + + +NN
Sbjct: 85 NTDKSNSPIGFTNSPQISVTRQVVLGGTSKYLINGHRAPQQSVLQLFQSVQLNINNPNFL 144
Query: 150 LPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQ 209
+ Q ++ + + P ++L E+A G + EK+ + + + T + TL
Sbjct: 145 IMQGKITKVLNMKPSEILSLIEEAAGTKMFEDRR----EKAERTMSKKETKLQENRTL-- 198
Query: 210 LKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
L E E +E++R + + +S + L
Sbjct: 199 ---LTEEIEPKLEKLRNEKRMFLEFQSTQTDL 227
Score = 136 (52.9 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 67/339 (19%), Positives = 146/339 (43%)
Query: 653 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKR---KLESIEKEDDIN-TALAKLVD 708
D+ +KL + ++E+ + + + + E E +L + + E + E D N T L +
Sbjct: 788 DKGSKLNELKKELKLLAKELEEQESESERKYDLFQNLELETEQLSSELDSNKTLLHNHLK 847
Query: 709 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE--FNLKQHEK-- 764
L ++ +I+ + ++V+ + E+ ++ D ++ ELE KQ EK
Sbjct: 848 SIESLKLENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKS 907
Query: 765 --LALQASLH-YEDCKKEVEHCRKHLSDAKRQAESIA-F-ITPELEK--EFLEMPTTIEE 817
L LQ +H K + K + D +++ E + F + + K E +++ T E
Sbjct: 908 SELELQKLVHDLNKYKSNTNNMEKIIEDLRQKHEFLEDFDLVRNIVKQNEGIDLDT-YRE 966
Query: 818 LEAAIQDNISQANSIFFLN-QNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
+ + + N N+++ E ++ ++ + E DK +++ +++++ K
Sbjct: 967 RSKQLNEKFQELRKKVNPNIMNMIENVEKKEAALKTMIKTIEKDKMKIQETISKLNEYKR 1026
Query: 877 KWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLS 936
+ TL ++ F F ++ L E G+ +KVK G + S
Sbjct: 1027 E---TLVKTWEKVTLDFGNIFADLLPNSFAKLVPCEGKDVTQGLEVKVKL---GNIWKES 1080
Query: 937 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
SGG+RS+ + +++L P ++DE++ +D
Sbjct: 1081 LIELSGGQRSLIALSLIMALLQFRPAPMYILDEVDAALD 1119
Score = 82 (33.9 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 55/252 (21%), Positives = 110/252 (43%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQ 709
I+ + L+K +EE+ I + K + + +N K++L+ + KE ++ + + D
Sbjct: 761 IKTKQMSLKKCQEEVSTIEKDMKEYDSDKGSKLNELKKELKLLAKELEEQESESERKYDL 820
Query: 710 AADLNIQQFKYAIEI---KNLL------VEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
+L ++ + + E+ K LL +E + + S E + +E D + E N
Sbjct: 821 FQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLVTVQTELN-- 878
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAE-SIAFITPELEKEFLEMPTTIEELE 819
EK L + +D E+E K D K+ +E + + +L K + +E
Sbjct: 879 -EEKKRL---MDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNK----YKSNTNNME 930
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 879
I+D + Q + FL L +Q + DL T +E K+ ++F L++K
Sbjct: 931 KIIED-LRQKHE--FLEDFDLVRNIVKQNEGIDLDTYRERSKQLNEKF----QELRKKVN 983
Query: 880 PTLRNLVAQINE 891
P + N++ + +
Sbjct: 984 PNIMNMIENVEK 995
Score = 76 (31.8 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 55/285 (19%), Positives = 122/285 (42%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLV 707
Q+ IE A L EE+ +K + +++ +NL KL+ ++ D N + ++++
Sbjct: 687 QKQIETIQADLNHVTEEL-QTQYATSQKTKTIQSDLNLSLHKLDLAKRNLDANPS-SQII 744
Query: 708 DQAADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFD--AKIRELEFNLKQHE 763
+ ++ +I + + I+ K + ++ + S EK M + D +K+ EL+ LK
Sbjct: 745 ARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKEYDSDKGSKLNELKKELKLLA 804
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
K E+ + E E + + + E ++ EL+ + ++ +E+
Sbjct: 805 K-------ELEEQESESERKYDLFQNLELETEQLS---SELDSNKTLLHNHLKSIESLKL 854
Query: 824 DNISQANSIFFLNQNILQ---EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 880
+N I + +++ E ++++ D+ + + EL+ + + K+
Sbjct: 855 ENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDI----DDELNELETLIKKKQDEKKSSEL 910
Query: 881 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHE--SDFDKFGILIK 923
L+ LV +N+ + N M E +HE DFD ++K
Sbjct: 911 ELQKLVHDLNK-YKSNTNNMEKIIEDLRQKHEFLEDFDLVRNIVK 954
Score = 74 (31.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 57/279 (20%), Positives = 113/279 (40%)
Query: 645 QTEQRLIEDEAAKLQKEREEI---INIVQIEKRKRREMENHINLRKRKLESIEKE-DDIN 700
+T +++ + K +E + + + ++++K K E I+ + K + E +
Sbjct: 257 ETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKELHKEGTISKLENKENGLLNEISRLK 316
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYA--EKHMASIEFD-AKIRELEF 757
T+L+ V+ D + EI + +++ K +YA EK ++ +K R+L
Sbjct: 317 TSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDL-- 374
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAE--SIAFITPELEKEFLEMPT-T 814
K+ E+L + L+ AK + S+A ++ E L+ T
Sbjct: 375 -YKRKEELVSTLTTGISSTGAADGGYNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLT 433
Query: 815 IE-ELEAAIQDN------ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 867
IE +L+ A +DN + Q + L EY +I+DL +++ K +
Sbjct: 434 IEPKLKEATKDNELNVKHVKQCQETCDKLRARLVEYGFDPSRIKDLKQREDKLKSHYYQT 493
Query: 868 LAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEV 906
+ LK + + NL + + NF+ V G V
Sbjct: 494 CKNSEYLKRR----VTNLEFNYTKPYP-NFEASFVHGVV 527
Score = 53 (23.7 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN 429
KI + ++ + + N+++ + + + LN+ + +++ D K E + KL+H L
Sbjct: 862 KIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNK 921
Query: 430 --SGAENIFEAYCWLQQHRHE 448
S N+ + L+Q +HE
Sbjct: 922 YKSNTNNMEKIIEDLRQ-KHE 941
Score = 52 (23.4 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 37/164 (22%), Positives = 80/164 (48%)
Query: 644 MQTEQRLI-EDEAAKLQKEREEIIN-IVQIEKRKRREMENHINLRKRKLESIEKEDDINT 701
+Q E+ L E +KL+ + ++N I +++ ++EN +N K +++E E I +
Sbjct: 286 LQKEKELHKEGTISKLENKENGLLNEISRLKTSLSIKVEN-LNDTTEKSKALESE--IAS 342
Query: 702 ALAKLVDQ-AADLNIQQ-FKYAIEI----KNLLV---EIVSCKWS-YAEKHMASIEFDAK 751
+ AKL+++ +A N ++ +K E ++L E+VS + + A ++A+
Sbjct: 343 SSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVSTLTTGISSTGAADGGYNAQ 402
Query: 752 IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAE 795
+ + + L + ++S+ E KKE+ L +A + E
Sbjct: 403 LAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNE 446
Score = 47 (21.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 16/76 (21%), Positives = 34/76 (44%)
Query: 166 LLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVR 225
LL E + + V++ L + + K K +E + + L + K+ EKD + V+
Sbjct: 308 LLNEISRLKTSLSIKVEN--LNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQ 365
Query: 226 QRAELLEKVESMKKKL 241
++ + K++L
Sbjct: 366 EQLSKQRDLYKRKEEL 381
Score = 41 (19.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 413 LKDMEDKNNKLLHALRNSGAENIFEAYCWL 442
+ D + + N + L SG NI +A C++
Sbjct: 20 ITDWDPQFNAIT-GLNGSGKSNILDAICFV 48
Score = 38 (18.4 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 19/84 (22%), Positives = 38/84 (45%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
+K + L S+I + +K+ + EK + L + D K E+ + L +
Sbjct: 331 EKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVSTLTTGIS 390
Query: 429 NSGA-ENIFEAYCWLQQHRHELNK 451
++GA + + A L + + ELN+
Sbjct: 391 STGAADGGYNAQ--LAKAKTELNE 412
Score = 37 (18.1 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 13/72 (18%), Positives = 30/72 (41%)
Query: 794 AESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDL 853
A+ I F P++ + + + + E + + ++ +Q+Y Q+QIE +
Sbjct: 638 AKKITF-HPKIRARSITLQGDVYDPEGTLSGGSRNTSESLLVD---IQKYNQIQKQIETI 693
Query: 854 STKQEADKKELK 865
+EL+
Sbjct: 694 QADLNHVTEELQ 705
>UNIPROTKB|Q90988 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein
2" species:9031 "Gallus gallus" [GO:0000796 "condensin complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 EMBL:X80792 IPI:IPI00579121 PIR:A54817
RefSeq:NP_990561.1 UniGene:Gga.4066 ProteinModelPortal:Q90988
PRIDE:Q90988 GeneID:396156 KEGG:gga:396156 CTD:10592
HOVERGEN:HBG106605 NextBio:20816212 Uniprot:Q90988
Length = 1189
Score = 129 (50.5 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 50/205 (24%), Positives = 92/205 (44%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISLRGDTKE 103
N + G NGSGKS+++ +I LG RA+S+ V + ++G K +S+ D +
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDLVYKNGQAGVNKATVSITFDNSD 87
Query: 104 -----------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
+ +TI R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKNSPLGFENNDEITITRQVIVGGRNKYLINGMNASNNRVQDLFGSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQ----HCALVEKSSKLKTIECTVKRN-GDTL 207
++ + + P ++L E+A G + H + +K SKL I + TL
Sbjct: 148 GQITKVLNMKPTEILAMIEEAAGTRMYECKKITAHKTIEKKESKLDEIRRIITEEISPTL 207
Query: 208 NQLK---ALNVEQEK---DVERVRQ 226
+LK A +E +K +VE +R+
Sbjct: 208 EKLKEARASYLEYQKMTREVENLRR 232
Score = 129 (50.5 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 71/349 (20%), Positives = 146/349 (41%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESI---EKEDDINTALAKL 706
I++ KL +++ + + K K++E+E + L + K E ++ + A+A L
Sbjct: 791 IKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 850
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 766
+Q + L + K +KN E+ S K E+ + + AK ++E +Q+ +L
Sbjct: 851 KEQVSALEAEAVKTRESLKNAENELSSEKGLMEER---TKDIKAKSAKIEKYREQNNELQ 907
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE-------ELE 819
L + D K + S + + +I E E F + TT + E
Sbjct: 908 LSINALEHDINKYQQETADASSTLDKLLKEYKWIASEKEL-FGQADTTYDFEANNPKETG 966
Query: 820 AAIQDNISQANSIF-FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
+Q +++ + LN + + + DL K+ + + + LA I+ L K
Sbjct: 967 QKLQKLLTKKEKLEKSLNMRAMNLLSEAEERYNDLMKKKRMVENDKIKILATIEELDRKK 1026
Query: 879 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS-GQLEVLSA 937
L ++N+ F F + + L + K IL ++FR G + +
Sbjct: 1027 NKALHIAWEKVNKDFGSIFSMLLPGAKAMLVPSK----KQNILDGLEFRVGLGDIWKENL 1082
Query: 938 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
SGG+RS++ + ++++ P ++DE++ +D + + + Q L
Sbjct: 1083 TELSGGQRSLAALSLILAILLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 87 (35.7 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 54/266 (20%), Positives = 121/266 (45%)
Query: 657 KLQKEREEIINIV--QIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLN 714
K ++ E+ + I Q+E ++ E+ N N+ + K + ++++ ++ + A+L+
Sbjct: 679 KTMRDAEDELKIKTSQLEATEK-ELANLKNMAE-KYQHLKQQWEMKSEEAELLQT----K 732
Query: 715 IQQFKYAIEIKNLLV---EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE----KLAL 767
IQQ Y + ++LL I C+ + + + + + + + LE +K E K
Sbjct: 733 IQQSAYHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKALENKMKNAEAERGKEIK 792
Query: 768 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 827
A KK+ + + + + +++ E++ ELE+ E + ++ EAA Q S
Sbjct: 793 NAQQKLNSAKKKADDSSRKMKEKQQEVEALVL---ELEQLKQEQASYKQQSEAAQQAIAS 849
Query: 828 QANSIFFLNQNILQEYEHRQRQIEDLSTKQ---EADKKELKRFLAEIDALKEKWLPTLRN 884
+ L ++ E + +LS+++ E K++K A+I+ +E+ L+
Sbjct: 850 LKEQVSALEAEAVKTRESLKNAENELSSEKGLMEERTKDIKAKSAKIEKYREQ-NNELQL 908
Query: 885 LVAQINETFSRNFQEMAVAGEVSLDE 910
+ + ++ QE A A +LD+
Sbjct: 909 SINALEHDINKYQQETADASS-TLDK 933
Score = 66 (28.3 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
E + I T ++ D + +LK EQE + + +Q + L E ES++ K P+
Sbjct: 446 EDQEAFEAIRKTKEKLQDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKHPY 505
Query: 244 LKYDMKKAE 252
L+++ K E
Sbjct: 506 LRFEYKNPE 514
Score = 61 (26.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 45/244 (18%), Positives = 104/244 (42%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 706
++++ E A +K +E I + EK+ E ++ + +++ D + L
Sbjct: 260 KKKIFESMAENEKKVKELAQQIEETEKKNNEEFGAKLHSLEAAFSELQRVDA--KVRSDL 317
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI--------EFDAKIRELEFN 758
+ +LN ++ + IK + E + ++ EK + I E K E +
Sbjct: 318 DHRKQNLNSEENRLKELIKIMQEEFKA--FTSKEKEIKKIKEGLNGLQEESKKDAEALAS 375
Query: 759 LKQHEKLALQASLHYEDCKK------EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP 812
+QH A+ A L D + ++ C+ +S A +A+ ++E
Sbjct: 376 AQQHFN-AVSAGLSSNDSGQGTSLADQMMTCKNEISKAATEAKQAQMKLKYAQQELKTKQ 434
Query: 813 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 872
+++++ + +++ +A + LQ+ E ++ + E+ +QEA + K+ +EI
Sbjct: 435 AEVKKMDGSYKED-QEAFEAIRKTKEKLQD-EMKKLKYEE--AEQEAHLAKKKQLSSEIS 490
Query: 873 ALKE 876
+L+E
Sbjct: 491 SLRE 494
Score = 52 (23.4 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 384 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK----LLHALRNSGAE 433
QAN+K++ +S E N+ K+ ++ + ++++ E KNN+ LH+L + +E
Sbjct: 257 QANKKKIFESMAE---NEKKV--KELAQQIEETEKKNNEEFGAKLHSLEAAFSE 305
Score = 52 (23.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 37/155 (23%), Positives = 67/155 (43%)
Query: 105 HLT-IMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLT---QFLPQ--DRVCEF 158
H+T I+ K+ T +E ++ K LE T++ + N+ Q L Q + E
Sbjct: 670 HVTPILSKLKTMRDAE----DELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEE 725
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQ 217
A+L K+ + + L ++ + E LK E + +R + + KAL N +
Sbjct: 726 AELLQTKIQQSAYHKQQEDLLALKK-TIAECEETLKKTEES-QRKAE--EEYKALENKMK 781
Query: 218 EKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ ER ++ +K+ S KKK MK+ +
Sbjct: 782 NAEAERGKEIKNAQQKLNSAKKKADDSSRKMKEKQ 816
Score = 52 (23.4 bits), Expect = 0.00074, Sum P(3) = 0.00074
Identities = 13/58 (22%), Positives = 33/58 (56%)
Query: 369 DKIEK-LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLH 425
+K+EK L + + L +A ++ +K++++ +K+ + +++++ K NK LH
Sbjct: 977 EKLEKSLNMRAMNLLSEAEERYNDLMKKKRMVENDKIKILAT---IEELDRKKNKALH 1031
Score = 50 (22.7 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 50/243 (20%), Positives = 101/243 (41%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
+TE++ E+ AKL + +++ + R ++++ RK+ L S E++ L
Sbjct: 283 ETEKKNNEEFGAKLHSLEAAFSELQRVDAKVRSDLDH----RKQNLNS---EENRLKELI 335
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE--FDAKIRELEFNLK-Q 761
K++ + + K +IK L + AE +AS + F+A L N Q
Sbjct: 336 KIMQEEFKAFTSKEKEIKKIKEGLNGLQEESKKDAEA-LASAQQHFNAVSAGLSSNDSGQ 394
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
LA Q CK E+ K ++AK+ + + EL+ + E +++++ +
Sbjct: 395 GTSLADQMMT----CKNEIS---KAATEAKQAQMKLKYAQQELKTKQAE----VKKMDGS 443
Query: 822 IQDNISQANSIFFLNQNILQE-----YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
+++ +I + + E YE +++ KQ + + R L E K
Sbjct: 444 YKEDQEAFEAIRKTKEKLQDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKH 503
Query: 877 KWL 879
+L
Sbjct: 504 PYL 506
Score = 46 (21.3 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
+++L+ +Q Q K ++E +L K T+ +C + LK E+ K
Sbjct: 726 AELLQTKIQ--QSAYHK-QQEDLLALKK-TIAECEETLKKTEESQRK 768
Score = 43 (20.2 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E +K ++ E E + K+KL + +MKK +Y
Sbjct: 429 ELKTKQAEVKKMDGSYKEDQEAFEAIRKTKEKL---QDEMKKLKY 470
>WB|WBGene00010056 [details] [associations]
symbol:smc-6 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
InterPro:IPR027132 InterPro:IPR003395 Pfam:PF02463 GO:GO:0009792
EMBL:Z66513 PANTHER:PTHR19306:SF2 GeneTree:ENSGT00550000074816
EMBL:Z99771 RefSeq:NP_496476.2 ProteinModelPortal:G5EG17 SMR:G5EG17
EnsemblMetazoa:F54D5.14 GeneID:174776 KEGG:cel:CELE_F54D5.14
CTD:174776 WormBase:F54D5.14 OMA:IVNTHIN Uniprot:G5EG17
Length = 1149
Score = 141 (54.7 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 87/387 (22%), Positives = 162/387 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTA 702
MQ + LIEDE + K +I + ++R+E E+ + ++K + K +
Sbjct: 771 MQKKIPLIEDEVKDILKNVADITADMAPVIQERKEAEHTLAEIQKETRDFASKSQKLQNE 830
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
L+K D L I+ K + + + + S + M +E D K +
Sbjct: 831 LSKYDDAGEILKIRLDKVKAD-EGVFFHTEAKLKSERDDAMEMVENDKKNHPMPPGETDP 889
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
L+ S + ++++E +K + A ++ IT E K+F + ++ L I
Sbjct: 890 PDLSSFPST--TEAQRKIEEMQKAVDRATVGCDTT--ITLECVKDFKDKLKRLKYLCRMI 945
Query: 823 QDNISQANSIFFLNQNILQEYEHRQRQIE-DLSTKQEADKKELKRFLAEIDALKEKWLPT 881
+D + + + L+ ++ Y ++ E + K + F+ ++ EK T
Sbjct: 946 EDVLIELKN---LHAARVKAYPSLKKFTELKVCNKFQELLAVRGHFIGGLEFDHEK--ET 1000
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL--IKVKFRQSGQLE--VLSA 937
L V E + + V +DEH D D + K ++SGQ + V
Sbjct: 1001 LNVNVQSSKEKDAMAGRRPEVLEVEEVDEHSYDDDSDDSTGPRRKKSKKSGQKKKRVRDL 1060
Query: 938 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ--PNT 995
SGGERS T ++SL ++ PFR++DE + MD +N + + LV A++ P+
Sbjct: 1061 KGLSGGERSFVTAALVMSLWEVMEQPFRMMDEFDVFMDMMNRKLVMDLLVELATKKFPHN 1120
Query: 996 PQCFLLTPKLLPDLEYSEACSILNIMN 1022
Q TP+ + +L + + MN
Sbjct: 1121 -QFIFFTPQGIKELNMVDGLQVFE-MN 1145
Score = 128 (50.1 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 60/246 (24%), Positives = 106/246 (43%)
Query: 7 KRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLN---LVIGPNGSGKSSLVCAI 63
K+ K+ GE + G + ++L NFM +L + N + GPNGSGKS+L AI
Sbjct: 31 KKAKLDTGERIAVSGRVASVKLTNFMCHANLQIDFKTAQNNCFYIGGPNGSGKSALFAAI 90
Query: 64 ALALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEH------LTIMRKIDTRNK 117
L LGG R ++ +Y+K G I I+L H ++I R I+ +
Sbjct: 91 NLGLGGRGSDNDRGNTVKSYIKDGTTQSKITITLTNAGLNAHPDFDDLISIERTINQASS 150
Query: 118 SEWFFNGKVVPKGEVLE-ITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGD 176
+ + KV +E I R V+ + R + ++ ++
Sbjct: 151 TYIMKSVKVTSSDNHVERIVSRKKADVDRIVS-----RFSIHLSNPAFWMSQDRSRSFLA 205
Query: 177 PQLPVQHCALVEKSSKLKTIECTVKRNGDTLN------QLKALNV-EQEKDVERVRQRAE 229
P L +S+ L+ I + R D L+ QLKA + ++K ++R++++ +
Sbjct: 206 NFKPANVYKLYLESTNLENIRLSYIRFADALDECFALIQLKAGEILNEQKKLKRMQEQRD 265
Query: 230 LLEKVE 235
L K++
Sbjct: 266 LQAKLD 271
Score = 110 (43.8 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 65/266 (24%), Positives = 127/266 (47%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIV-QIEKRKRREMENHINLRKRKLESIEK-EDDINT 701
MQ EQR D AKL ++R + + ++ K R+ + I L +K E+ + +D+
Sbjct: 260 MQ-EQR---DLQAKLDQDRALVASFCWKLLFCKVRDYNDQIELTLKKQEAQKTLQDETKK 315
Query: 702 ALAKLVDQAA----DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
AK ++AA + IQ+F+ +E+++ EI + K +EF+ KIRE E
Sbjct: 316 EYAK--NRAARTEVEKKIQEFRDEVEVQD--AEIAEAREDLDAKKRKVLEFEEKIRECEQ 371
Query: 758 NL--KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 815
++ K EK ++ ++ + K EV + L + + + +T ++E ++ ++
Sbjct: 372 SIRKKTSEKKYMERTI--VNAKNEV----RILLEKQGNQDLTKRLT-KVENDYKDISQQR 424
Query: 816 EELEAAIQD-NISQANSIFFLNQNILQEYEHR-QRQIEDLSTKQEADKKELKRFLA-EID 872
E +E + + + + +E ++ QR I L K E D + ++R A + D
Sbjct: 425 ENMELGGESAKLREKLDTVITDYKRKEEEKYTIQRDINQLRRKIEQDMETMRRSRATKKD 484
Query: 873 ALKEKWLPTLRNLVAQINETFSRNFQ 898
A+ K+ + ++ +IN + SR FQ
Sbjct: 485 AIN-KFGSHMAEILMEINRSKSR-FQ 508
Score = 63 (27.2 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 39/199 (19%), Positives = 81/199 (40%)
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEF-AKLSPVKLLEETEKAVGDPQLPVQHCALV 187
K +V I RF+I ++N ++ QDR F A P + + ++ + + +
Sbjct: 174 KADVDRIVSRFSIHLSNPAFWMSQDRSRSFLANFKPANVYKLYLESTNLENIRLSYIRFA 233
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALN-VEQEKDVERVRQRAELLEKVESMKKKLPWLK- 245
+ + + +K G+ LN+ K L +++++D++ + L V S KL + K
Sbjct: 234 DALDECFAL-IQLKA-GEILNEQKKLKRMQEQRDLQAKLDQDRAL--VASFCWKLLFCKV 289
Query: 246 --YD------MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKK 297
Y+ +KK E T E K I+ + E + D + +
Sbjct: 290 RDYNDQIELTLKKQEAQKTLQDETKKEYAKNRAART--EVEKKIQEFRDEVEVQDAEIAE 347
Query: 298 LSSLINENSKRRMDFLEKV 316
++ ++ ++F EK+
Sbjct: 348 AREDLDAKKRKVLEFEEKI 366
Score = 62 (26.9 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 22/106 (20%), Positives = 53/106 (50%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES-IE--------K 695
Q E + E+AKL+++ + +I + ++ ++ ++ IN +RK+E +E K
Sbjct: 423 QRENMELGGESAKLREKLDTVITDYKRKEEEKYTIQRDINQLRRKIEQDMETMRRSRATK 482
Query: 696 EDDINTALAKLVDQAADLNIQQFKYAIEIKNLL---VEIVSCKWSY 738
+D IN + + + ++N + ++ K L + ++ KW++
Sbjct: 483 KDAINKFGSHMAEILMEINRSKSRFQTVPKGPLGKYITLIDPKWAF 528
Score = 57 (25.1 bits), Expect = 0.00084, Sum P(3) = 0.00084
Identities = 26/104 (25%), Positives = 54/104 (51%)
Query: 649 RLIED---EAAKLQ----KEREEIINIVQIEKRKRR----EMENHI-NLRKRKLESIEKE 696
RLIED EA +L+ ++++ + ++ E+ + + E + + NLR ++L+ +
Sbjct: 686 RLIEDTKSEAMRLETQDLRKQDHELKVIYNERDQTKAAIDEFDRKLSNLRSQELQKERQA 745
Query: 697 DDINTALAKLV--DQAADLN--IQQFKYAI-----EIKNLLVEI 731
D+ LA+ DQ +LN I++ + I E+K++L +
Sbjct: 746 KDLRAELAQTANEDQVENLNESIEEMQKKIPLIEDEVKDILKNV 789
Score = 56 (24.8 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 33/159 (20%), Positives = 68/159 (42%)
Query: 96 SLRGDTKEEHL-TIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDR 154
+L+ +TK+E+ + + K + F + V E+ E + + + + +F + R
Sbjct: 308 TLQDETKKEYAKNRAARTEVEKKIQEFRDEVEVQDAEIAEAREDLDAKKRKVLEFEEKIR 367
Query: 155 VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALN 214
CE + + E+ + + + V+ L+EK N D +L
Sbjct: 368 ECEQSIRKKTSEKKYMERTIVNAKNEVR--ILLEKQG-----------NQDLTKRLT--K 412
Query: 215 VEQE-KDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
VE + KD+ + R+ EL + +++KL + D K+ E
Sbjct: 413 VENDYKDISQQRENMELGGESAKLREKLDTVITDYKRKE 451
Score = 48 (22.0 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
Q K L E + Q L E +E M+KK+P ++ ++K
Sbjct: 744 QAKDLRAELAQTANE-DQVENLNESIEEMQKKIPLIEDEVK 783
Score = 39 (18.8 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 275 HEFSKPIEGKKQEKAILDGDCKKLSSLINENSKR 308
HE + Q KA +D +KLS+L ++ ++
Sbjct: 708 HELKVIYNERDQTKAAIDEFDRKLSNLRSQELQK 741
Score = 38 (18.4 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 5/20 (25%), Positives = 15/20 (75%)
Query: 590 SISRYGGHVSASVEPVNQSR 609
+I+++G H++ + +N+S+
Sbjct: 485 AINKFGSHMAEILMEINRSK 504
Score = 38 (18.4 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 369 DKIEKLGSQILELGVQANQKR 389
D I K GS + E+ ++ N+ +
Sbjct: 484 DAINKFGSHMAEILMEINRSK 504
>ZFIN|ZDB-GENE-030131-3196 [details] [associations]
symbol:smc3 "structural maintenance of chromosomes
3" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IMP] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-030131-3196 GO:GO:0005524 GO:GO:0005694 HSSP:P58301
GO:GO:0007064 SUPFAM:SSF75553 KO:K06669 CTD:9126 HOVERGEN:HBG039849
EMBL:BC044408 IPI:IPI00616384 RefSeq:NP_999854.1 UniGene:Dr.24937
ProteinModelPortal:Q803N2 STRING:Q803N2 PRIDE:Q803N2 GeneID:324475
KEGG:dre:324475 InParanoid:Q803N2 NextBio:20808789
ArrayExpress:Q803N2 Bgee:Q803N2 Uniprot:Q803N2
Length = 1216
Score = 134 (52.2 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 83/364 (22%), Positives = 151/364 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q + R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQDNRQLLNERIKLEGIMTRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHM-ASIEFDAKIREL 755
D IN + + ++ DL+ K +EIK + +W EK +I D K EL
Sbjct: 867 DGINKRIKDTMARSEDLDTLIDKTEVEIKEHQKSME--RWKNIEKEQNEAINHDTK--EL 922
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q ++ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLTLKQLFRKLEQCNTELKK 978
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 869
+ A+ N S+ Q+ L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 870 EIDALKEKWLPTLR-NLVAQINETFSRNFQEMAVAGEV----SLDEHESDFDKF-GILIK 923
+ +K +P + LV + +T Q+ G+ S D+F G+ I+
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDTEGGQSQDEGEGGDSERASSSQSSVPSVDQFTGVGIR 1098
Query: 924 VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 983
V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 VSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKAA 1156
Query: 984 QQLV 987
++
Sbjct: 1157 SDMI 1160
Score = 114 (45.2 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 53/240 (22%), Positives = 103/240 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D + P GS+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTVVDPFGSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Score = 84 (34.6 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 35/143 (24%), Positives = 60/143 (41%)
Query: 747 EFDAKIRELEFNLKQHEKLALQASLHY-----EDCKKEVEHCRKHLSDAKRQAESIAFIT 801
++D R LE+ + E +A L E C + R DA+ + E +
Sbjct: 215 KWDKMRRALEYTIYNQELNETRAKLDELSSKRETCGDKSRQLRDAQQDARDKVEETERVV 274
Query: 802 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEY----EHRQRQIED---LS 854
EL+ M E+L A Q+ I Q + +++ E E R+R +++ L
Sbjct: 275 RELKSRISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLL 334
Query: 855 TKQEADKKELKRFLAEIDALKEK 877
K E +KEL+ + + +KEK
Sbjct: 335 EKIEEKQKELQETEPKFNTVKEK 357
Score = 82 (33.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 20/105 (19%), Positives = 52/105 (49%)
Query: 774 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 833
E+ ++ V + +S K + E ++ E K+ ++ ++L+ + N Q +
Sbjct: 268 EETERVVRELKSRISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLL 327
Query: 834 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DALKEK 877
Q +L++ E +Q+++++ K K++ +R +A + A +E+
Sbjct: 328 KERQKLLEKIEEKQKELQETEPKFNTVKEKEERGIARLAQATQER 372
Score = 73 (30.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 803 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 862
EL+K+ + + ELEA + +N+ + +I +N I + Q++ + T+Q K
Sbjct: 677 ELQKDMRKAEEELGELEAKLNENLRR--NIETINNEI----DQLMNQMQQIETQQRKFKA 730
Query: 863 ELKRFLAEIDALKEK 877
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 72 (30.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 48/236 (20%), Positives = 103/236 (43%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLE--SIEKEDDINT 701
+ +++ D++ +L+ +++ + V+ +R RE+++ I+ K + E S E+++ I
Sbjct: 242 LSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSRISAMKEEKEQLSAERQEQIKQ 301
Query: 702 ALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 761
KL +A DL + + + K LL E EK E + K ++ K+
Sbjct: 302 R-TKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNTVKE--KE 358
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE-A 820
+A A E + R +K + + +I EL+ L+ ++ + A
Sbjct: 359 ERGIARLAQATQERTDLYAKQGRGSQFTSKEERDK--WIKKELKS--LDQAINDKKRQIA 414
Query: 821 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK-QEADKK--ELKRFLAEIDA 873
AI ++ + L++Y + + ++ T+ +E DKK E+K E+ +
Sbjct: 415 AIHKDLEDTEQN---KERNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNRKDELQS 467
Score = 68 (29.0 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 55/297 (18%), Positives = 125/297 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDI--NT 701
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E +T
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 702 ALAKLVDQAADLNIQ-QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
+ + ADL Q + + +L EI + + I+ + + +E L
Sbjct: 774 RESLKAELGADLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLN 833
Query: 761 QHEKLAL-QASLHYEDCKK------------EVEHCRKHLSDAKRQAESIAFITPELEKE 807
++ + L Q + ++ E++ K + D ++E + + + E E
Sbjct: 834 ENLRKRLDQVEQELNELRETEGGTVLTATTSELDGINKRIKDTMARSEDLDTLIDKTEVE 893
Query: 808 FLEMPTTIEELEAAIQDNIS-QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
E ++E + NI + N + L++ +RQ + L K+E KK +
Sbjct: 894 IKEHQKSMERWK-----NIEKEQNEAINHDTKELEKMTNRQGML--LKKKEECMKKIREL 946
Query: 867 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIK 923
+A ++ TL+ L ++ E + ++ + + +LD+ + ++ LIK
Sbjct: 947 GSLPQEAFEKYQTLTLKQLFRKL-EQCNTELKKYSHVNKKALDQFVNFSEQKEKLIK 1002
Score = 67 (28.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 53/222 (23%), Positives = 96/222 (43%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
+Q E ++ +L KER++++ ++ ++++ +E E N K EKE+ L
Sbjct: 312 LQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNTVK------EKEERGIARL 365
Query: 704 AKLVDQAADLNIQQ-----FKYAIEI-KNLLVEIVSCKWSYAEK--HMASIEFDAKIREL 755
A+ + DL +Q F E K + E+ S + +K +A+I D + E
Sbjct: 366 AQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEQ 425
Query: 756 --EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIA----FITPELEKEFL 809
E NL+Q+ KL L+ + K VE K + K + + + ++ E E
Sbjct: 426 NKERNLEQYNKL--DQDLN--EVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQQ 481
Query: 810 EMPTTIEELEAAIQDNISQANSIFFLN--QNILQEYEHRQRQ 849
+ E+LE Q + A LN +I + EH +R+
Sbjct: 482 ALAAKREDLEKK-QQLLRAATGKAILNGIDSINKVLEHFRRK 522
Score = 60 (26.2 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 363 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 415
A + DK+E+ + EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKVEETERVVRELKSRISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 416 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 471
++ +LL R E I E LQ+ + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELQETEPKFNTVKEKEERGIARLAQATQERTDL-Y 376
Query: 472 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 60 (26.2 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE---KDVER 223
+EETE+ V + L + A+ E+ +L E + T +LKA +++ E +R
Sbjct: 267 VEETERVVRE--LKSRISAMKEEKEQLSA-ERQEQIKQRTKLELKAKDLQDELAGNSEQR 323
Query: 224 VR---QRAELLEKVESMKKKL 241
R +R +LLEK+E +K+L
Sbjct: 324 KRLLKERQKLLEKIEEKQKEL 344
Score = 55 (24.4 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 23/134 (17%), Positives = 62/134 (46%)
Query: 186 LVEKSSKLKTIECTVKRNGDT-LNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
L+ + +++T + K + D+ L+++K L ++++ + + L+ +E+ +
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQ---EKAILDGDCKKLSSL 301
+ +K AE + + E + + +Q E+ L+G ++ +
Sbjct: 774 RESLK-AE-LGADLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETY 831
Query: 302 INENSKRRMDFLEK 315
+NEN ++R+D +E+
Sbjct: 832 LNENLRKRLDQVEQ 845
Score = 54 (24.1 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 34/165 (20%), Positives = 74/165 (44%)
Query: 371 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
IE + ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IETINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 427 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 486
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGADLLSQLSLEDQRRVDDLNDEIRQ------LQ 808
Query: 487 QDAGDRDFLAKNLKPFDVP--ILNYVSNESSRKEPFQISEEMRAL 529
QD +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QD--NRQLLNERIKLEGIMTRVETYL-NENLRKRLDQVEQELNEL 850
Score = 47 (21.6 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 25/111 (22%), Positives = 48/111 (43%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
++ E+ K +++ L ++ + ++ K K+ E + + +L L E S
Sbjct: 188 KINELLKYIEERLHTLED--EKEELAQYQKWD--KMRRALEYTIYNQELNETRAKLDELS 243
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV-RQRAELLEKVESMKKK 240
SK +T C GD QL+ + VE R EL ++ +MK++
Sbjct: 244 SKRET--C-----GDKSRQLRDAQQDARDKVEETERVVRELKSRISAMKEE 287
>UNIPROTKB|E1C614 [details] [associations]
symbol:E1C614 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00819568
Ensembl:ENSGALT00000037605 OMA:FESINES ArrayExpress:E1C614
Uniprot:E1C614
Length = 1149
Score = 133 (51.9 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 69/344 (20%), Positives = 140/344 (40%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESI---EKEDDINTALAKL 706
I++ KL +++ + + K K++E+E + L + K E ++ + A+A L
Sbjct: 756 IKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 815
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNL---KQHE 763
+Q + L + K +KN E+ S +W +KH ++ +I++ F + HE
Sbjct: 816 KEQVSALEAEAVKTRESLKNAENELSSDQWEKKQKHSDVMDKLVQIQKNMFQITWKSVHE 875
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
C +++ K + E + E T ++L+ +
Sbjct: 876 SFPKILVPLMSSCV-QLDKLLKEYKWIASEKELFGQADTTYDFEANNPKETGQKLQKLLT 934
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 883
S+ N+L E E R DL K+ + + + LA I+ L K L
Sbjct: 935 KKEKLEKSLNMRAMNLLSEAEERYN---DLMKKKRIVENDKIKILATIEELDRKKNKALH 991
Query: 884 NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS-GQLEVLSAHHQSG 942
++N+ F F + + L + K IL ++FR G + + SG
Sbjct: 992 IAWEKVNKDFGSIFSMLLPGAKAMLVPSK----KQNILDGLEFRVGLGDIWKENLTELSG 1047
Query: 943 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
G+RS++ + ++++ P ++DE++ +D + + + Q L
Sbjct: 1048 GQRSLAALSLILAILLFKPAPIYILDEVDAALDLSHTQNIGQML 1091
Score = 123 (48.4 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 49/206 (23%), Positives = 92/206 (44%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISLRGDTKE 103
N + G NGSGKS+++ +I LG RA+S+ V + ++G K +S+ D +
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDLVYKNGQAGVNKATVSITFDNSD 87
Query: 104 -----------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
+ +TI R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKNSPLGFENNDEITITRQVIVGGRNKYLINGMNASNNRVQDLFGSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLP-----VQHCALVEKSSKLKTIECTVKRN-GDT 206
++ + + P ++L E+A ++ H + +K SKL I + T
Sbjct: 148 GQITKVLNMKPTEILAMIEEAAAGTRMYECMKITAHKTIEKKESKLDEIRRIITEEISPT 207
Query: 207 LNQLK---ALNVEQEK---DVERVRQ 226
L +LK A +E +K +VE +R+
Sbjct: 208 LEKLKEARASYLEYQKMTREVENLRR 233
Score = 83 (34.3 bits), Expect = 3.3e-07, Sum P(4) = 3.3e-07
Identities = 49/216 (22%), Positives = 93/216 (43%)
Query: 677 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 736
R+ E+ + ++ +LE+ EKE LA L + A Q K E+K+ E++ K
Sbjct: 647 RDAEDELKIKTSQLEATEKE------LANLKNMAE--KYQHLKQQWEMKSEEAELLQTKI 698
Query: 737 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCK-----------KEVEH 782
+ H + A I E E LK+ E+ +A Y+ + KE+++
Sbjct: 699 QQSAYHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKALENKMKNAEAERGKEIKN 758
Query: 783 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 842
++ L+ AK++A+ + +++++ E+ + ELE Q+ S Q I
Sbjct: 759 AQQKLNSAKKKADDSS---RKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 815
Query: 843 YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
E Q+ L + ++ LK AE + ++W
Sbjct: 816 KE----QVSALEAEAVKTRESLKN--AENELSSDQW 845
Score = 66 (28.3 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
E + I T ++ D + +LK EQE + + +Q + L E ES++ K P+
Sbjct: 411 EDQEAFEAIRKTKEKLQDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKHPY 470
Query: 244 LKYDMKKAE 252
L+++ K E
Sbjct: 471 LRFEYKNPE 479
Score = 51 (23.0 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 384 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
QAN+K++ +S E N+ K+ ++ + ++++ E KNN++
Sbjct: 258 QANKKKIFESMAE---NEKKV--KELAQQIEETEKKNNEV 292
Score = 46 (21.3 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
+++L+ +Q Q K ++E +L K T+ +C + LK E+ K
Sbjct: 691 AELLQTKIQ--QSAYHK-QQEDLLALKK-TIAECEETLKKTEESQRK 733
Score = 44 (20.5 bits), Expect = 3.3e-07, Sum P(4) = 3.3e-07
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 652 EDEAA--KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE 694
ED+ A ++K +E++ + +++K K E E +L K+K S E
Sbjct: 411 EDQEAFEAIRKTKEKLQD--EMKKLKYEEAEQEAHLAKKKQLSSE 453
Score = 43 (20.2 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E +K ++ E E + K+KL + +MKK +Y
Sbjct: 394 ELKTKQAEVKKMDGSYKEDQEAFEAIRKTKEKL---QDEMKKLKY 435
>TIGR_CMR|CHY_1443 [details] [associations]
symbol:CHY_1443 "chromosome segregation protein SMC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0007059 "chromosome
segregation" evidence=ISS] [GO:0030261 "chromosome condensation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000036392
KO:K03529 TIGRFAMs:TIGR02168 OMA:GDITKFI RefSeq:YP_360275.1
ProteinModelPortal:Q3AC59 STRING:Q3AC59 GeneID:3728135
KEGG:chy:CHY_1443 PATRIC:21276017
BioCyc:CHYD246194:GJCN-1442-MONOMER Uniprot:Q3AC59
Length = 1185
Score = 165 (63.1 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 94/373 (25%), Positives = 173/373 (46%)
Query: 644 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINL-RKRKLESIEKEDDINT 701
++ E I D + Q +E+ + VQ+EK +EN NL ++ L+ E +
Sbjct: 799 LEKEISRINDLIYENQNYYQELTLQQVQLEKA----LENIFNLINEKSLQKKELFERQKV 854
Query: 702 ALAKLVD-QAADLNIQQFKYAIEIKNLLV-EIVSCKWSYAE--KHMASIEFDAKIRELEF 757
+ K ++ + LN+++ +E K +++S Y E K+ E K+ E++
Sbjct: 855 SAKKALEFKNKILNLKKDFLTLERKIAAHGDLLSVSKKYFETVKNKHE-ELKDKLSEMQT 913
Query: 758 NLKQHEKLALQASLHYEDCKK-EVEHCRKHLSDAKRQA----ESIAFITPELEKEFLEMP 812
L + +KL +Q H+ + + E E R L + R E + + E LE P
Sbjct: 914 TLTKTQKL-IQK--HFAEISRLETEQ-RNLLQEINRLKLLLNEKYDIVLGDEEVLKLE-P 968
Query: 813 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI- 871
IEE E I++ +Q + +N ++ E + + +I L+ +Q D E K L ++
Sbjct: 969 VYIEERE--IEELYNQIQGLGPVNLFVIDEVKRLEERINFLN-QQRNDLNEAKEQLEKLL 1025
Query: 872 DALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKF--RQS 929
L E+ + +NE + F+E+ G +L++ + K GI I V+ ++
Sbjct: 1026 SQLTEEMEQRFNEFLKLLNEEYDLVFKELFGGGRAALEKVVGEDQKEGIEIIVELPGKKR 1085
Query: 930 GQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRA 989
L +LS GGER++++I L +L +L PF V+DEI+ +D N ++ F ++
Sbjct: 1086 QPLGLLS-----GGERALASIALLFALFNLKPSPFCVLDEIDAALDEANVQR-FAAYLKK 1139
Query: 990 ASQPNTPQCFLLT 1002
+ N Q L+T
Sbjct: 1140 IGERN--QVILIT 1150
Score = 122 (48.0 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 51/201 (25%), Positives = 98/201 (48%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES----IEKE-DDINT 701
E RLIE + +L K E N++ +EK R + N+I K+KLE +EKE IN
Sbjct: 751 ESRLIELKG-QLDKNNREKKNLL-VEKENREQQINNIISLKKKLEEKIAFLEKEISRIND 808
Query: 702 ALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 761
+ + + +L +QQ + ++N+ +++ K S +K + + + + LEF K
Sbjct: 809 LIYENQNYYQELTLQQVQLEKALENIF-NLINEK-SLQKKELFERQKVSAKKALEFKNK- 865
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
L + ++++ LS +K+ E++ EL+ + EM TT+ + +
Sbjct: 866 ----ILNLKKDFLTLERKIAAHGDLLSVSKKYFETVKNKHEELKDKLSEMQTTLTKTQKL 921
Query: 822 IQDNISQANSIFFLNQNILQE 842
IQ + ++ + + +N+LQE
Sbjct: 922 IQKHFAEISRLETEQRNLLQE 942
Score = 104 (41.7 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 50/204 (24%), Positives = 90/204 (44%)
Query: 48 VIGPNGSGKSSLVCAIALALGGD-TQLLG--RATSIGAYVKRGEES-GYIKISLRGDTKE 103
++GPNGSGKS++ AI ALG T++L R + +G + G +++L D
Sbjct: 28 IVGPNGSGKSNVAEAIRWALGETKTKILRSERQQDVIFTGSQGRKPVGMAEVTLILDNSN 87
Query: 104 EH-------LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
+H + I R+ +SE++ N ++ E+ + + + Q +V
Sbjct: 88 KHFPLPYAEIAITRRFFRSGESEFYINKSPCRLKDIHELLVDTGLGKHGYA-IIGQGQVD 146
Query: 157 EFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE 216
E SP + E+A G + ++ +E KL + + R D N+L
Sbjct: 147 EILFSSPEEKRSYLEEAAGINRFRMRE---LEAKKKLLETQNGITRLNDLTNELTNQLQA 203
Query: 217 QEKDVERVRQRAELLEKVESMKKK 240
+E+DV + + L EK+ + K K
Sbjct: 204 KEQDVIKAKTYLTLKEKL-TFKAK 226
Score = 84 (34.6 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 76/383 (19%), Positives = 156/383 (40%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
++E LQK+ +E++ +K E+E ++ +K E I+ I KL D A
Sbjct: 681 KNEIKLLQKQVDELL-------QKNNEVEEALSAFLKKQEDIDAT--IKLTGEKLSDIEA 731
Query: 712 DLNIQQFKYA-IEIKNLLVE--IVSCKWSYAE--KHMASIEFDAKIRELEFNLKQHEKLA 766
L K I+ K L+E ++ K + + ++ + + RE + N K
Sbjct: 732 QLTEADLKEQNIKDKRNLIESRLIELKGQLDKNNREKKNLLVEKENREQQINNIISLKKK 791
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF-----LEMPTTIEELEAA 821
L+ + + +KE+ + + + + + +LEK L ++++ E
Sbjct: 792 LEEKIAF--LEKEISRINDLIYENQNYYQELTLQQVQLEKALENIFNLINEKSLQKKELF 849
Query: 822 IQDNISQANSIFFLNQ--NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 879
+ +S ++ F N+ N+ +++ +R+I KK + + + LK+K L
Sbjct: 850 ERQKVSAKKALEFKNKILNLKKDFLTLERKIAAHGDLLSVSKKYFETVKNKHEELKDK-L 908
Query: 880 PTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFR-QSGQLEVLSAH 938
++ + + + ++F E++ E + ++ +L+ K+ G EVL
Sbjct: 909 SEMQTTLTKTQKLIQKHFAEISRL-ETEQRNLLQEINRLKLLLNEKYDIVLGDEEVLKLE 967
Query: 939 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQC 998
ER + LY +Q L V+DE+ + + ER F R Q
Sbjct: 968 PVYIEEREIEE-LYN-QIQGLGPVNLFVIDEVKR----LEERINFLNQQRNDLNEAKEQL 1021
Query: 999 FLLTPKLLPDLE--YSEACSILN 1019
L +L ++E ++E +LN
Sbjct: 1022 EKLLSQLTEEMEQRFNEFLKLLN 1044
Score = 58 (25.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 18/79 (22%), Positives = 40/79 (50%)
Query: 164 VKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVER 223
+KLL++ + V+ AL K + I+ T+K G+ L+ ++A E + +
Sbjct: 684 IKLLQKQVDELLQKNNEVEE-ALSAFLKKQEDIDATIKLTGEKLSDIEAQLTEADLKEQN 742
Query: 224 VRQRAELLE-KVESMKKKL 241
++ + L+E ++ +K +L
Sbjct: 743 IKDKRNLIESRLIELKGQL 761
Score = 48 (22.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 30/118 (25%), Positives = 58/118 (49%)
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLP-QDRVCEFAKLSPVKLLEETEKAVGDPQLPVQH 183
K++ K +V E+ ++ N L+ FL Q+ + KL+ KL + E + + L Q+
Sbjct: 685 KLLQK-QVDELLQKNNEVEEALSAFLKKQEDIDATIKLTGEKL-SDIEAQLTEADLKEQN 742
Query: 184 CALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ +K + +++ +K D N+ K N+ EK+ R + + + S+KKKL
Sbjct: 743 --IKDKRNLIESRLIELKGQLDKNNREKK-NLLVEKE-----NREQQINNIISLKKKL 792
Score = 44 (20.5 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 28/123 (22%), Positives = 56/123 (45%)
Query: 138 RFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEE--TEKAVGDPQLPVQHCA--LVEKSSKL 193
R N N LT L Q + + K L+E T KA + +++ + E K+
Sbjct: 189 RLNDLTNELTNQL-QAKEQDVIKAKTYLTLKEKLTFKAKNYYGIKIKNLLDKVRENEEKI 247
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKV----ESMKKKLPWLKYDMK 249
+ +++N D +N+L+A + + ++ ++ L+K+ ES +KL +K +
Sbjct: 248 TLLHNLIEKNQDQVNRLEASFAKILSEEGKLGLFSDNLQKIVLNLESCLEKLDNVKKYQQ 307
Query: 250 KAE 252
+ E
Sbjct: 308 EEE 310
Score = 37 (18.1 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED 418
+Q + + + N+ +L + + +++L +N S LK ED
Sbjct: 672 NQTVSVLQRKNEIKLLQKQVDELLQKNNEVEEALSAFLKKQED 714
>UNIPROTKB|G3N365 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553
GeneTree:ENSGT00580000081628 EMBL:DAAA02059205
Ensembl:ENSBTAT00000063829 Uniprot:G3N365
Length = 1216
Score = 135 (52.6 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 87/364 (23%), Positives = 150/364 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 755
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 869
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 870 EIDALKEKWLPTLR-NLVAQIN--ETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILIK 923
+ +K +P + LV + E +E V E S D+F G+ I+
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQLRMKEKGVVKERGSGSQSSVPSVDQFTGVGIR 1098
Query: 924 VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 983
V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 VSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKAV 1156
Query: 984 QQLV 987
++
Sbjct: 1157 SDMI 1160
Score = 111 (44.1 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 53/240 (22%), Positives = 102/240 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Score = 87 (35.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 60/265 (22%), Positives = 110/265 (41%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREME-----NHINLRKRKLESIE-KEDDINTA 702
+ IE+ L++E+EE+ + +K RR +E +N + KL+ + K +
Sbjct: 194 KYIEERLHTLEEEKEELAQYQKWDKM-RRALEYTIYNQELNETRAKLDELSAKRETSGEK 252
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+L D D + +++ L +I + K EK S E +I KQ
Sbjct: 253 SRQLRDAQQDARDKMEDIERQVRELKTKISAMK---EEKEQLSAERQEQI-------KQR 302
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
KL L+A ++ E ++ L + ++ E I EL + + + E+ E I
Sbjct: 303 TKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGI 362
Query: 823 QD--NISQANSIFFLNQNILQEY---EHRQRQIE-DLSTKQEA--DKKE----LKRFLAE 870
+Q + + Q ++ E R + I+ +L + +A DKK + + L +
Sbjct: 363 ARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLED 422
Query: 871 IDALKEKWLPTLRNLVAQINETFSR 895
+A KEK L L +NE +R
Sbjct: 423 TEANKEKNLEQYNKLDQDLNEVKAR 447
Score = 83 (34.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 56/244 (22%), Positives = 104/244 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIE-KRK--RREMENHINLRKRKLESIEKE-DD 698
++T+ +++E +L ER+E I ++E K K + E+ + RKR L+ +K +
Sbjct: 277 LKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEK 336
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
I +L + N + K I L YA++ S +F +K E +
Sbjct: 337 IEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGS-QFTSK-EERDKW 394
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+K+ K QA D K+++ K L D + E +L+++ E+ +EEL
Sbjct: 395 IKKELKSLDQA---INDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEEL 451
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQI-----EDLSTKQEADKKEL-KRFLAEID 872
+ + + +N L E+ ++Q EDL KQ+ + K L ID
Sbjct: 452 DRKYYE-VKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGID 510
Query: 873 ALKE 876
++ +
Sbjct: 511 SINK 514
Score = 74 (31.1 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 698
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 699 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 814
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 875 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 928
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 929 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 987 V 987
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 803 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 862
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 863 ELKRFLAEIDALKEK 877
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 363 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 415
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 416 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 471
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 472 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 54 (24.1 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 205 DTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
D ++L A N EQ K + +++R +LLEK+E +K+L
Sbjct: 311 DLQDEL-AGNSEQRKRL--LKERQKLLEKIEEKQKEL 344
Score = 52 (23.4 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 371 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 427 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 486
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 487 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 529
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
Score = 52 (23.4 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV-RQRAELLEKVESMKKK 240
L E +KL + + +G+ QL+ + +E + RQ EL K+ +MK++
Sbjct: 232 LNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEE 287
Score = 51 (23.0 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK 219
K+S +K EE E+ + Q ++ +E K K ++ + N + Q K L E++K
Sbjct: 280 KISAMK--EEKEQLSAERQEQIKQRTKLEL--KAKDLQDELAGNSE---QRKRLLKERQK 332
Query: 220 DVERVRQRA-ELLE---KVESMKKK 240
+E++ ++ EL E K S+K+K
Sbjct: 333 LLEKIEEKQKELAETEPKFNSVKEK 357
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 861 KKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 900
+K++++ E+ L+ K LR + +IN + +M
Sbjct: 679 QKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQM 718
Score = 37 (18.1 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 13/62 (20%), Positives = 35/62 (56%)
Query: 192 KLKTIECTV---KRNGDTLNQ-LKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
+LK+++ + KR +++ L+ +EK++E+ + + L +V++ ++L Y+
Sbjct: 398 ELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYE 457
Query: 248 MK 249
+K
Sbjct: 458 VK 459
>UNIPROTKB|E2QRT5 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 KO:K06636
GeneTree:ENSGT00580000081569 CTD:27127 OMA:QLYHNEK
EMBL:AAEX03007228 EMBL:AAEX03007229 EMBL:AAEX03007230
RefSeq:XP_538328.2 Ensembl:ENSCAFT00000001296
Ensembl:ENSCAFT00000049571 GeneID:481207 KEGG:cfa:481207
NextBio:20856062 Uniprot:E2QRT5
Length = 1235
Score = 132 (51.5 bits), Expect = 6.6e-12, Sum P(3) = 6.6e-12
Identities = 69/300 (23%), Positives = 127/300 (42%)
Query: 21 GNIIEIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
G + + + NF ++ H + P R +IGPNGSGKS+++ A++ +G T L R +
Sbjct: 2 GRLEVLLVENFKSWRGHQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTANL-RVKN 60
Query: 80 I-----GAYVKRG-EESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVL 133
I GA++ R S +KI ++ EE T R I SE+ F+ V + +
Sbjct: 61 IQELIHGAHIGRPVSSSASVKIVYVEESGEEK-TFTRII-RGGCSEFHFDDNPVSRSAYI 118
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
++ I V + Q V + P + + E+ +L ++ EK KL
Sbjct: 119 AELEKIGIIVKARNCLVFQGTVESISMKKPKERTQFFEEISTSGELIGEY---EEKKRKL 175
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE--KVESMKKKLPWLKYDMKKA 251
+ E + N + + A + + E + LLE K+ ++ +L L ++ KK
Sbjct: 176 QKAEEDAQFNFNKKKNVAAERKHAKLEKEEAERYQSLLEELKMNKIQLQLFQLYHNEKKI 235
Query: 252 EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAIL-------DGDCKKLSSLINE 304
++ + HE ++ KK+E +L + + K L +L+N+
Sbjct: 236 HFLNTELEHVSRNLSVTKESLSRHE--NTVKAKKKEHGMLTRQLQQTEKELKSLEALLNQ 293
Score = 122 (48.0 bits), Expect = 6.6e-12, Sum P(3) = 6.6e-12
Identities = 81/391 (20%), Positives = 176/391 (45%)
Query: 645 QTEQRLIEDEAAK--LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
Q ++RL + K +QK REEI ++ Q+E+ ++ N + ++++L+ I + N
Sbjct: 827 QLKKRLSKINTLKETIQKGREEIEDLKQVEE-DCLQIVNELMAKRQQLKDIFVTQNAN-- 883
Query: 703 LAKLVDQAADLNIQQFKYAI--EIKNLLVEIVSCKWSYAEKHMA--SIEFDAKIRELEFN 758
A+ V + ++F AI E+ E+V + S +K + ++ D K++++E
Sbjct: 884 -AEKVQAQIEEKRKKF-LAIDKEVGKWQKEVVIIQTSLEQKRLEKHNLLLDCKVQDIEII 941
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSD-AKRQAESIAFITPELEKEFLEMPTTIE- 816
L +L + E E E + + K +A I + + + + LE IE
Sbjct: 942 LLLG---SLDDIIEVE-LGTEAESTQATVDIYEKEEAIEIDYSSLRDDLKALESDKEIEA 997
Query: 817 ELEAAIQDNISQANSIFFL---NQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 873
L+ +Q SQ + + N L+ + + + ++ + EA KKE + E +
Sbjct: 998 HLKLLLQQVASQEDVLLKTAAPNLRALENLKTVRDKFQESTDAFEASKKEARMCRQEFEQ 1057
Query: 874 LKEK----WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS 929
+K++ + ++ I+E + + + ++ +S + E + + GI
Sbjct: 1058 VKKRRYDLFSQCFEHVSISIDEIYKKLCRNVSAQAFLSPENPEEPYLE-GISYNCV--AP 1114
Query: 930 GQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRA 989
G+ + + SGGE+ V+ + L ++ PF V+DE++ +D N K+ ++
Sbjct: 1115 GK-RFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKV-SSYIKE 1172
Query: 990 ASQPNTPQCFLLTPKLLPDLEYSEACSILNI 1020
+Q Q +++ L + YS+A +++ +
Sbjct: 1173 QTQEQF-QMIIIS---LKEEFYSKADALIGV 1199
Score = 72 (30.4 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 59/263 (22%), Positives = 111/263 (42%)
Query: 644 MQTEQRLIEDEAAKLQ---KEREEIINIVQIEKRKRREME--NHI-------NLRKRKLE 691
+Q+E IE + L KER++ I Q EK + E E H N+R+ + +
Sbjct: 737 LQSELLNIESQCTMLSEGIKERQQRIEEFQ-EKIDKVEDEIFQHFCEEIGVENIREFEKK 795
Query: 692 SIEKEDDINTALAKLVDQAADLNIQ------QFKYAIEIKNLLVEIVSCKWSYAEKHMAS 745
++++ +I+ + Q LN+Q Q K + N L E + K + +
Sbjct: 796 HVKQQQEIDQKRLEFEKQKTRLNVQLEYSRNQLKKRLSKINTLKETIQ-KGREEIEDLKQ 854
Query: 746 IEFDAK--IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHL----SDAKRQAESIAF 799
+E D + EL +Q + + + + + E + ++E RK + + + +
Sbjct: 855 VEEDCLQIVNELMAKRQQLKDIFVTQNANAEKVQAQIEEKRKKFLAIDKEVGKWQKEVVI 914
Query: 800 ITPELEKEFLEMPTTIEELEAAIQDN--ISQANSIF-FLNQNILQEYEHRQRQIEDLSTK 856
I LE++ LE + L+ +QD I S+ + + E E Q + D+ K
Sbjct: 915 IQTSLEQKRLEKHNLL--LDCKVQDIEIILLLGSLDDIIEVELGTEAESTQATV-DIYEK 971
Query: 857 QEA---DKKELKRFLAEIDALKE 876
+EA D L+ L +++ KE
Sbjct: 972 EEAIEIDYSSLRDDLKALESDKE 994
Score = 70 (29.7 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 40/187 (21%), Positives = 87/187 (46%)
Query: 694 EKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNL--LVEIVSCKWSYAEKHMASIEFDA 750
EKE ++ A+L+ + DL ++ + ++K + LV+ + Y++ + I
Sbjct: 668 EKEIKNLRDRRAQLIQELKDL-MKILRKEADLKQIQTLVQGTHTRLKYSQSELEMI---- 722
Query: 751 KIRELEFNLKQHEKLALQASLHYED-CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFL 809
K ++L ++ +L + L+ E C E ++ + E I + E+ + F
Sbjct: 723 KKKQLAAFYREQSQLQSEL-LNIESQCTMLSEGIKERQQRIEEFQEKIDKVEDEIFQHFC 781
Query: 810 EMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLA 869
E +E + + ++ Q I +Q L E+E ++ + L+ + E + +LK+ L+
Sbjct: 782 E-EIGVENIREFEKKHVKQQQEI---DQKRL-EFEKQKTR---LNVQLEYSRNQLKKRLS 833
Query: 870 EIDALKE 876
+I+ LKE
Sbjct: 834 KINTLKE 840
Score = 66 (28.3 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 48/242 (19%), Positives = 103/242 (42%)
Query: 646 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAK 705
T++ L E K++E + Q+++ ++ L +++ + I+ +++ + L K
Sbjct: 252 TKESLSRHENTVKAKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIKAKENTSHHLKK 311
Query: 706 LVDQAA----DLNIQQFKYAIEIKNLLVEIVSCK--WSYAEKHMASIEFDAKIRELEFNL 759
L D A D Q K +IK L E+V W EK + E K R++E
Sbjct: 312 L-DVAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQVEE-EILHKGRDIELEA 369
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRKHLS----DAKRQAESIAFITPELEKEFLEMPTTI 815
Q ++ L E +K+V + L + K E +AF E + E+ +
Sbjct: 370 SQLDRYK---GLK-EQVRKKVAIMTQQLEKLHWEQKADKERLAF---ERRRHG-EVQENL 421
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
++++ I+D+ + + + + + +++Q E L + E K + E++ ++
Sbjct: 422 KQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVGEIENTKSRMSEVNEELNLIR 481
Query: 876 EK 877
+
Sbjct: 482 SE 483
Score = 66 (28.3 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 23/104 (22%), Positives = 47/104 (45%)
Query: 218 EKDVERVR-QRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXX---NT 273
EK+++ +R +RA+L+++++ + K L + D+K+ + +
Sbjct: 668 EKEIKNLRDRRAQLIQELKDLMKILR-KEADLKQIQTLVQGTHTRLKYSQSELEMIKKKQ 726
Query: 274 LHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVD 317
L F + + E ++ C LS I E +R +F EK+D
Sbjct: 727 LAAFYREQSQLQSELLNIESQCTMLSEGIKERQQRIEEFQEKID 770
Score = 58 (25.5 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 61/314 (19%), Positives = 127/314 (40%)
Query: 684 NLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHM 743
NLR R+ + I++ D L K++ + ADL +Q + ++ + ++ + +K
Sbjct: 673 NLRDRRAQLIQELKD----LMKILRKEADL--KQIQTLVQGTHTRLKYSQSELEMIKKKQ 726
Query: 744 ASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE 803
+ F + +L+ L E S ++ ++ +E ++ + K + E E
Sbjct: 727 LAA-FYREQSQLQSELLNIESQCTMLSEGIKERQQRIEEFQEKID--KVEDEIFQHFCEE 783
Query: 804 LEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQ-EYEHRQRQIEDLSTKQEADKK 862
+ E + E+ Q I Q F + L + E+ + Q++ +K K+
Sbjct: 784 IGVENIR---EFEKKHVKQQQEIDQKRLEFEKQKTRLNVQLEYSRNQLKKRLSKINTLKE 840
Query: 863 ELKRFLAEIDALK---EKWLPTLRNLVA---QINETF-SRNFQEMAVAGEV--------S 907
+++ EI+ LK E L + L+A Q+ + F ++N V ++ +
Sbjct: 841 TIQKGREEIEDLKQVEEDCLQIVNELMAKRQQLKDIFVTQNANAEKVQAQIEEKRKKFLA 900
Query: 908 LDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVV 967
+D+ + K ++I+ Q +LE + + + IL L SL D+
Sbjct: 901 IDKEVGKWQKEVVIIQTSLEQK-RLEKHNLLLDCKVQ-DIEIILLLGSLDDIIEVELGTE 958
Query: 968 DEINQGMDPINERK 981
E Q I E++
Sbjct: 959 AESTQATVDIYEKE 972
Score = 56 (24.8 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 33/140 (23%), Positives = 58/140 (41%)
Query: 691 ESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSY-AEKHMASIEFD 749
E + K DI ++L D+ L +Q + + I +E W A+K + E
Sbjct: 357 EILHKGRDIELEASQL-DRYKGLK-EQVRKKVAIMTQQLE--KLHWEQKADKERLAFE-R 411
Query: 750 AKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFL 809
+ E++ NLKQ ++ E ++ + C L + K+Q E++ E+E
Sbjct: 412 RRHGEVQENLKQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLV---GEIENTKS 468
Query: 810 EMPTTIEELEAAIQDNISQA 829
M EEL I+ + A
Sbjct: 469 RMSEVNEELNL-IRSELQNA 487
Score = 51 (23.0 bits), Expect = 6.6e-12, Sum P(3) = 6.6e-12
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 364 YEPPHDKIEKLGSQILELG-VQANQKRLQKS---EKEKILNQNKLTLRQCSDRLKDMEDK 419
+E DK E+L + G VQ N K++++ K++I + T + C D LK+ + +
Sbjct: 398 WEQKADK-ERLAFERRRHGEVQENLKQIKEQIEDHKKRIEKLEEYT-KTCMDCLKEKKQQ 455
Query: 420 NNKLLHALRNS 430
L+ + N+
Sbjct: 456 EETLVGEIENT 466
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 654 EAAKLQKEREEIINIVQIEKRKRR--EMENHINLRKRKLES 692
+ K +K++EE + + +IE K R E+ +NL + +L++
Sbjct: 447 DCLKEKKQQEETL-VGEIENTKSRMSEVNEELNLIRSELQN 486
Score = 37 (18.1 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 15/67 (22%), Positives = 30/67 (44%)
Query: 360 TVPAYEPPHD----KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD 415
TV A + H ++++ ++ L NQKR Q + ++ + + L +KD
Sbjct: 262 TVKAKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIKAKENTSHHLKKLDVAKKSIKD 321
Query: 416 MEDKNNK 422
E + +K
Sbjct: 322 SEKQCSK 328
>UNIPROTKB|F1NEA6 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0051276 "chromosome organization"
evidence=IEA] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005694
GO:GO:0051276 SUPFAM:SSF75553 GeneTree:ENSGT00580000081628
EMBL:AADN02030887 EMBL:AADN02030888 IPI:IPI00684346
Ensembl:ENSGALT00000033118 ArrayExpress:F1NEA6 Uniprot:F1NEA6
Length = 1217
Score = 134 (52.2 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 755
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTLARSDDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 869
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 870 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 922
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERGSGSQSSVPSVDQFTGVGI 1098
Query: 923 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 983 FQQLV 987
++
Sbjct: 1157 VSDMI 1161
Score = 107 (42.7 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 51/235 (21%), Positives = 99/235 (42%)
Query: 28 LHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVK 85
+ F ++ D I P S+ N+++G NGSGKS+ AI L + L + A +
Sbjct: 8 IQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLPPLKRL-ALLH 66
Query: 86 RGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEVLEITK 137
G I + + D + L I +R++ K ++F + K+V K +V+ + +
Sbjct: 67 EGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLE 126
Query: 138 RFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIE 197
+N + Q ++ + A + L+ + G V E S +K E
Sbjct: 127 SAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISLMKETE 183
Query: 198 CTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 184 G--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Score = 88 (36.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 60/265 (22%), Positives = 111/265 (41%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREME-----NHINLRKRKLESIE-KEDDINTA 702
+ IE+ L++E+EE+ + +K RR +E +N + KL+ + K +
Sbjct: 194 KYIEERLHTLEEEKEELAQYQKWDKM-RRALEYTIYNQELNETRAKLDELSAKRETSGEK 252
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+L D D + + +++ L +I + K EK S E +I KQ
Sbjct: 253 SRQLRDAQQDARDKMEEIERQVRELKTKISAMK---EEKEQLSAERQEQI-------KQR 302
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
KL L+A ++ E ++ L + ++ E I EL + + + E+ E I
Sbjct: 303 TKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGI 362
Query: 823 QD--NISQANSIFFLNQNILQEY---EHRQRQIE-DLSTKQEA--DKKE----LKRFLAE 870
+Q + + Q ++ E R + I+ +L + +A DKK + + L +
Sbjct: 363 ARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLED 422
Query: 871 IDALKEKWLPTLRNLVAQINETFSR 895
+A KEK L L +NE +R
Sbjct: 423 TEANKEKNLEQYSKLDQDLNEVKAR 447
Score = 84 (34.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 56/244 (22%), Positives = 104/244 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIE-KRK--RREMENHINLRKRKLESIEKE-DD 698
++T+ +++E +L ER+E I ++E K K + E+ + RKR L+ +K +
Sbjct: 277 LKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEK 336
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
I +L + N + K I L YA++ S +F +K E +
Sbjct: 337 IEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGS-QFTSK-EERDKW 394
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+K+ K QA D K+++ K L D + E +L+++ E+ +EEL
Sbjct: 395 IKKELKSLDQA---INDKKRQIAAIHKDLEDTEANKEKNLEQYSKLDQDLNEVKARVEEL 451
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQI-----EDLSTKQEADKKEL-KRFLAEID 872
+ + + +N L E+ ++Q EDL KQ+ + K L ID
Sbjct: 452 DRKYYE-VKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGID 510
Query: 873 ALKE 876
++ +
Sbjct: 511 SINK 514
Score = 78 (32.5 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 803 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 862
EL+K+ + + ELEA + +N+ + +I +NIL + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ENILLSIDQLMNQMQQIETQQRKFKA 730
Query: 863 ELKRFLAEIDALKEK 877
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 72 (30.4 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 69/361 (19%), Positives = 154/361 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 698
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 699 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 814
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
+ + + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 LARSDD-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 875 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 928
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 929 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 987 V 987
V
Sbjct: 1048 V 1048
Score = 62 (26.9 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 37/155 (23%), Positives = 63/155 (40%)
Query: 363 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 415
A + DK+E++ Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 416 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 471
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 472 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 57 (25.1 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 26/161 (16%), Positives = 68/161 (42%)
Query: 157 EFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDT-LNQLKALNV 215
E +L KL E + + + L + L+ + +++T + K + D+ L+++K L
Sbjct: 688 ELGELE-AKLNENLRRNIENILLSIDQ--LMNQMQQIETQQRKFKASRDSILSEMKMLKE 744
Query: 216 EQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNT-L 274
++++ + + L+ +E+ + + +K N +
Sbjct: 745 KRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEI 804
Query: 275 HEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEK 315
+ + E+ L+G ++ + +NEN ++R+D +E+
Sbjct: 805 RQLQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQ 845
Score = 56 (24.8 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE---KDVER 223
+EE E+ V + L + A+ E+ +L E + T +LKA +++ E +R
Sbjct: 267 MEEIERQVRE--LKTKISAMKEEKEQLSA-ERQEQIKQRTKLELKAKDLQDELAGNSEQR 323
Query: 224 VR---QRAELLEKVESMKKKL 241
R +R +LLEK+E +K+L
Sbjct: 324 KRLLKERQKLLEKIEEKQKEL 344
Score = 54 (24.1 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV-RQRAELLEKVESMKKK 240
L E +KL + + +G+ QL+ + +E + RQ EL K+ +MK++
Sbjct: 232 LNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEE 287
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK 219
K+S +K EE E+ + Q ++ +E K K ++ + N + Q K L E++K
Sbjct: 280 KISAMK--EEKEQLSAERQEQIKQRTKLEL--KAKDLQDELAGNSE---QRKRLLKERQK 332
Query: 220 DVERVRQRA-ELLE---KVESMKKK 240
+E++ ++ EL E K S+K+K
Sbjct: 333 LLEKIEEKQKELAETEPKFNSVKEK 357
Score = 47 (21.6 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 28/145 (19%), Positives = 66/145 (45%)
Query: 387 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHR 446
Q+R K+ ++ IL++ K+ LK+ ++ K + S +++ + ++ R
Sbjct: 724 QQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMPKQRS-LQSLEASLHAMESTR 774
Query: 447 HELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDV-- 504
L E +L ++++ ++ + L D + + Q+ +R L + +K +
Sbjct: 775 ESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQQE--NRQLLNERIKLEGIIT 826
Query: 505 PILNYVSNESSRKEPFQISEEMRAL 529
+ Y+ NE+ RK Q+ +E+ L
Sbjct: 827 RVETYL-NENLRKRLDQVEQELNEL 850
>SGD|S000004375 [details] [associations]
symbol:SMC6 "Component of the SMC5-SMC6 complex" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0071139
"resolution of recombination intermediates" evidence=IMP]
[GO:0035861 "site of double-strand break" evidence=IDA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IEA;IMP] [GO:0006281 "DNA repair" evidence=IEA;IDA;IMP]
[GO:0030915 "Smc5-Smc6 complex" evidence=IEA;IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] InterPro:IPR027132 SGD:S000004375 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0003684 EMBL:BK006945
GO:GO:0000724 EMBL:U19104 EMBL:X05143 GO:GO:0035861 eggNOG:COG1196
GO:GO:0030915 GO:GO:0034500 GO:GO:0071139 PANTHER:PTHR19306:SF2
GeneTree:ENSGT00550000074816 OrthoDB:EOG486CMM EMBL:X80930
PIR:S51470 RefSeq:NP_013487.1 ProteinModelPortal:Q12749 SMR:Q12749
DIP:DIP-6624N IntAct:Q12749 MINT:MINT-675848 STRING:Q12749
PaxDb:Q12749 EnsemblFungi:YLR383W GeneID:851099 KEGG:sce:YLR383W
CYGD:YLR383w HOGENOM:HOG000141857 OMA:CANEANY NextBio:967785
Genevestigator:Q12749 GermOnline:YLR383W Uniprot:Q12749
Length = 1114
Score = 150 (57.9 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 59/237 (24%), Positives = 108/237 (45%)
Query: 21 GNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
G I ++ L NFM +H + GSRLN ++G NGSGKS+++ AI + LG R +S+
Sbjct: 80 GYIKKVILRNFMCHEHFELELGSRLNFIVGNNGSGKSAILTAITIGLGAKASETNRGSSL 139
Query: 81 GAYVKRGEESGYIKISLRGD---TKEEHL----TIMRKIDTRNKSEWFF----NGKVVP- 128
++ G S I + L ++ + I+ +I R+ F NGK +
Sbjct: 140 KDLIREGCYSAKIILHLDNSKYGAYQQGIFGNEIIVERIIKRDGPASFSLRSENGKEISN 199
Query: 129 -KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALV 187
K ++ + F++ V+N FL QD F S + ++ + L L+
Sbjct: 200 KKKDIQTVVDYFSVPVSNPMCFLSQDAARSFLTASTSQ--DKYSHFMKGTLLQEITENLL 257
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
S+ + + + + + L LKA + +K + + Q ++L E+ ++ K W+
Sbjct: 258 YASAIHDSAQENMALHLENLKSLKAEYEDAKKLLRELNQTSDLNERKMLLQAKSLWI 314
Score = 108 (43.1 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 79/378 (20%), Positives = 167/378 (44%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL--AKLVDQ 709
E++ ++++ +EI ++ K + R+ + K + + +N+ + K +Q
Sbjct: 720 EEKLSEVRSRLKEIDGRLKSTKNEMRKTNFRMTELKMNVGKVVDTGILNSKINERKNQEQ 779
Query: 710 A-ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL--EFNLKQHE-KL 765
A A + + ++I+ + E K Y +A +E ++++L + N +Q + +
Sbjct: 780 AIASYEAAKEELGLKIEQIAQEAQPIKEQYDSTKLALVEAQDELQQLKEDINSRQSKIQK 839
Query: 766 ALQASLHYEDCKKE-VEHCRK---HLSDAK----RQAESI-AFITPELEKEFLEMPTTIE 816
+++YED KK +E+ +K +++ K RQ ++ AF + E E +++P T E
Sbjct: 840 YKDDTIYYEDKKKVYLENIKKIEVNVAALKEGIQRQIQNACAFCSKE-RIENVDLPDTQE 898
Query: 817 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
E++ + D +S+ + Q + Q ++ L K KE ++ EID
Sbjct: 899 EIKREL-DKVSR------MIQKAEKSLGLSQEEVIALFEKCRNKYKEGQKKYMEIDEA-- 949
Query: 877 KWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES-DFDKF-GILIKVKFRQSGQLEV 934
L L N + ++ + +N E + +D S KF G L +K +S ++ +
Sbjct: 950 --LNRLHNSLKARDQNY-KN-AEKGTCFDADMDFRASLKVRKFSGNLSFIKDTKSLEIYI 1005
Query: 935 LSAHHQ--------SGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
L+ + + SGGE+S S + L++ +DE + MD +N + +
Sbjct: 1006 LTTNDEKARNVDTLSGGEKSFSQMALLLATWKPMRSRIIALDEFDVFMDQVNRKIGTTLI 1065
Query: 987 VRAASQPNTPQCFLLTPK 1004
V+ Q ++TP+
Sbjct: 1066 VKKLKDIARTQTIIITPQ 1083
Score = 76 (31.8 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 53/239 (22%), Positives = 106/239 (44%)
Query: 650 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 709
LIE E +LQ R+ + + + +E++ + K ++ K + T L V +
Sbjct: 704 LIEQETKELQNIRDRYEEKLSEVRSRLKEIDGRLKSTKNEMR---KTNFRMTELKMNVGK 760
Query: 710 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE--KLAL 767
D I K E KN I S + A K ++ + +E + +Q++ KLAL
Sbjct: 761 VVDTGILNSKIN-ERKNQEQAIASYE---AAKEELGLKIEQIAQEAQPIKEQYDSTKLAL 816
Query: 768 -QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 826
+A + K+++ + + K + ++I + + +K +LE IE AA+++ I
Sbjct: 817 VEAQDELQQLKEDINSRQSKIQ--KYKDDTIYY--EDKKKVYLENIKKIEVNVAALKEGI 872
Query: 827 SQA--NSIFFLNQNILQEY------EHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+ N+ F ++ ++ E +R+++ +S + +K L E+ AL EK
Sbjct: 873 QRQIQNACAFCSKERIENVDLPDTQEEIKRELDKVSRMIQKAEKSLGLSQEEVIALFEK 931
Score = 72 (30.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 50/260 (19%), Positives = 123/260 (47%)
Query: 673 KRKRREMENHINLRKRK--LESIEKEDDI--NTALAK-LVDQAADLNIQQFKYAIEIKNL 727
K+ RE+ +L +RK L++ D+ NT K L ++ + + + + +I+N
Sbjct: 288 KKLLRELNQTSDLNERKMLLQAKSLWIDVAHNTDACKNLENEISGIQQKVDEVTEKIRNR 347
Query: 728 LVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE---KLALQASLHYEDCKKEVEHCR 784
+I +++ ++ + DAK+ + +H+ +L +E K +
Sbjct: 348 QEKIE--RYT-SDGTTIEAQIDAKVIYVNEKDSEHQNARELLRDVKSRFEKEKSNQAEAQ 404
Query: 785 KHLSDAKRQAES----IAFITPELEKEFL----EMPTTIEELEAAIQDNISQANSIFFLN 836
++ +++ ++ IA + EL KE +M +E+LE A + + + N+ ++
Sbjct: 405 SNIDQGRKKVDALNKTIAHLEEELTKEMGGDKDQMRQELEQLEKA-NEKLREVNNSLVVS 463
Query: 837 QNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRN 896
LQ+ ++ +R D+ ++E++ + + R +++ K + L+N +A+ N+TF N
Sbjct: 464 ---LQDVKNEER---DIQHERESELRTISR------SIQNKKVE-LQN-IAKGNDTFLMN 509
Query: 897 FQEMAVAGEVSLDEHESDFD 916
F ++++ +++F+
Sbjct: 510 FDRNMDRLLRTIEQRKNEFE 529
Score = 47 (21.6 bits), Expect = 7.5e-06, Sum P(4) = 7.5e-06
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRKRREME 680
QR I++ A KER E +++ ++ +RE++
Sbjct: 873 QRQIQNACAFCSKERIENVDLPDTQEEIKRELD 905
Score = 45 (20.9 bits), Expect = 7.5e-06, Sum P(4) = 7.5e-06
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 500 KPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKE 547
K D ILN NE +E S E + +++Q+ +KE
Sbjct: 760 KVVDTGILNSKINERKNQEQAIASYEAAKEELGLKIEQIAQEAQPIKE 807
Score = 44 (20.5 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDM-EDKNNK 422
ELG++ Q + ++ + KL L + D L+ + ED N++
Sbjct: 790 ELGLKIEQIAQEAQPIKEQYDSTKLALVEAQDELQQLKEDINSR 833
Score = 43 (20.2 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 19/87 (21%), Positives = 33/87 (37%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
+KIE+ S + Q + K + +EK+ + LR R + E N +
Sbjct: 349 EKIERYTSDGTTIEAQIDAKVIYVNEKDSEHQNARELLRDVKSRF-EKEKSNQAEAQSNI 407
Query: 429 NSGAENIFEAYCWLQQHRHELNKEAYG 455
+ G + + + EL KE G
Sbjct: 408 DQGRKKVDALNKTIAHLEEELTKEMGG 434
Score = 39 (18.8 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 20/94 (21%), Positives = 40/94 (42%)
Query: 396 EKILNQNKLTLR--QCSDR----LKDMEDKNNKLLHALRNSGAENIFEAYCWLQQ----- 444
+ + Q+K+ L+ SD LKD+ ++ K L +R+ E + E L++
Sbjct: 678 DTVTYQDKIRLKVNSSSDNGTQYLKDLIEQETKELQNIRDRYEEKLSEVRSRLKEIDGRL 737
Query: 445 --HRHELNKEAYGPVLLEVNVSNRAHANYLEDHV 476
++E+ K + L++NV L +
Sbjct: 738 KSTKNEMRKTNFRMTELKMNVGKVVDTGILNSKI 771
Score = 39 (18.8 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 13/64 (20%), Positives = 28/64 (43%)
Query: 359 QTVPAYEPPHD----KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLK 414
Q + +YE + KIE++ + + Q + +L E + L Q K + +++
Sbjct: 779 QAIASYEAAKEELGLKIEQIAQEAQPIKEQYDSTKLALVEAQDELQQLKEDINSRQSKIQ 838
Query: 415 DMED 418
+D
Sbjct: 839 KYKD 842
>UNIPROTKB|A7Z065 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0036033 "mediator complex binding"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0007052 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 GO:GO:0030893 OMA:NKVLEHF IPI:IPI00698576
UniGene:Bt.5290 HOVERGEN:HBG039849 GeneTree:ENSGT00580000081628
EMBL:DAAA02059205 EMBL:BC153263 SMR:A7Z065 STRING:A7Z065
Ensembl:ENSBTAT00000046231 InParanoid:A7Z065 Uniprot:A7Z065
Length = 1217
Score = 132 (51.5 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 755
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 869
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 870 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 922
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 923 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 983 FQQLV 987
++
Sbjct: 1157 VSDMI 1161
Score = 111 (44.1 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 53/240 (22%), Positives = 102/240 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Score = 87 (35.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 60/265 (22%), Positives = 110/265 (41%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREME-----NHINLRKRKLESIE-KEDDINTA 702
+ IE+ L++E+EE+ + +K RR +E +N + KL+ + K +
Sbjct: 194 KYIEERLHTLEEEKEELAQYQKWDKM-RRALEYTIYNQELNETRAKLDELSAKRETSGEK 252
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+L D D + +++ L +I + K EK S E +I KQ
Sbjct: 253 SRQLRDAQQDARDKMEDIERQVRELKTKISAMK---EEKEQLSAERQEQI-------KQR 302
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
KL L+A ++ E ++ L + ++ E I EL + + + E+ E I
Sbjct: 303 TKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGI 362
Query: 823 QD--NISQANSIFFLNQNILQEY---EHRQRQIE-DLSTKQEA--DKKE----LKRFLAE 870
+Q + + Q ++ E R + I+ +L + +A DKK + + L +
Sbjct: 363 ARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLED 422
Query: 871 IDALKEKWLPTLRNLVAQINETFSR 895
+A KEK L L +NE +R
Sbjct: 423 TEANKEKNLEQYNKLDQDLNEVKAR 447
Score = 83 (34.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 56/244 (22%), Positives = 104/244 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIE-KRK--RREMENHINLRKRKLESIEKE-DD 698
++T+ +++E +L ER+E I ++E K K + E+ + RKR L+ +K +
Sbjct: 277 LKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEK 336
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
I +L + N + K I L YA++ S +F +K E +
Sbjct: 337 IEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGS-QFTSK-EERDKW 394
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+K+ K QA D K+++ K L D + E +L+++ E+ +EEL
Sbjct: 395 IKKELKSLDQA---INDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEEL 451
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQI-----EDLSTKQEADKKEL-KRFLAEID 872
+ + + +N L E+ ++Q EDL KQ+ + K L ID
Sbjct: 452 DRKYYE-VKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGID 510
Query: 873 ALKE 876
++ +
Sbjct: 511 SINK 514
Score = 74 (31.1 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 698
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 699 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 814
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 875 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 928
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 929 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 987 V 987
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 803 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 862
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 863 ELKRFLAEIDALKEK 877
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 363 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 415
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 416 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 471
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 472 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 54 (24.1 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 205 DTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
D ++L A N EQ K + +++R +LLEK+E +K+L
Sbjct: 311 DLQDEL-AGNSEQRKRL--LKERQKLLEKIEEKQKEL 344
Score = 52 (23.4 bits), Expect = 6.5e-11, Sum P(3) = 6.5e-11
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 371 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 427 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 486
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 487 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 529
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
Score = 52 (23.4 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV-RQRAELLEKVESMKKK 240
L E +KL + + +G+ QL+ + +E + RQ EL K+ +MK++
Sbjct: 232 LNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEE 287
Score = 51 (23.0 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK 219
K+S +K EE E+ + Q ++ +E K K ++ + N + Q K L E++K
Sbjct: 280 KISAMK--EEKEQLSAERQEQIKQRTKLEL--KAKDLQDELAGNSE---QRKRLLKERQK 332
Query: 220 DVERVRQRA-ELLE---KVESMKKK 240
+E++ ++ EL E K S+K+K
Sbjct: 333 LLEKIEEKQKELAETEPKFNSVKEK 357
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 861 KKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 900
+K++++ E+ L+ K LR + +IN + +M
Sbjct: 679 QKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQM 718
>UNIPROTKB|E2R7T4 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553 KO:K06669 OMA:NKVLEHF
CTD:9126 GeneTree:ENSGT00580000081628 EMBL:AAEX03015526
RefSeq:XP_851818.2 ProteinModelPortal:E2R7T4
Ensembl:ENSCAFT00000017137 GeneID:486886 KEGG:cfa:486886
Uniprot:E2R7T4
Length = 1217
Score = 132 (51.5 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 755
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 869
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 870 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 922
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 923 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 983 FQQLV 987
++
Sbjct: 1157 VSDMI 1161
Score = 111 (44.1 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 53/240 (22%), Positives = 102/240 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Score = 87 (35.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 60/265 (22%), Positives = 110/265 (41%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREME-----NHINLRKRKLESIE-KEDDINTA 702
+ IE+ L++E+EE+ + +K RR +E +N + KL+ + K +
Sbjct: 194 KYIEERLHTLEEEKEELAQYQKWDKM-RRALEYTIYNQELNETRAKLDELSAKRETSGEK 252
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+L D D + +++ L +I + K EK S E +I KQ
Sbjct: 253 SRQLRDAQQDARDKMEDIERQVRELKTKISAMK---EEKEQLSAERQEQI-------KQR 302
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
KL L+A ++ E ++ L + ++ E I EL + + + E+ E I
Sbjct: 303 TKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGI 362
Query: 823 QD--NISQANSIFFLNQNILQEY---EHRQRQIE-DLSTKQEA--DKKE----LKRFLAE 870
+Q + + Q ++ E R + I+ +L + +A DKK + + L +
Sbjct: 363 ARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLED 422
Query: 871 IDALKEKWLPTLRNLVAQINETFSR 895
+A KEK L L +NE +R
Sbjct: 423 TEANKEKNLEQYNKLDQDLNEVKAR 447
Score = 83 (34.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 56/244 (22%), Positives = 104/244 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIE-KRK--RREMENHINLRKRKLESIEKE-DD 698
++T+ +++E +L ER+E I ++E K K + E+ + RKR L+ +K +
Sbjct: 277 LKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEK 336
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
I +L + N + K I L YA++ S +F +K E +
Sbjct: 337 IEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGS-QFTSK-EERDKW 394
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+K+ K QA D K+++ K L D + E +L+++ E+ +EEL
Sbjct: 395 IKKELKSLDQA---INDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEEL 451
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQI-----EDLSTKQEADKKEL-KRFLAEID 872
+ + + +N L E+ ++Q EDL KQ+ + K L ID
Sbjct: 452 DRKYYE-VKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGID 510
Query: 873 ALKE 876
++ +
Sbjct: 511 SINK 514
Score = 74 (31.1 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 698
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 699 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 814
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 875 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 928
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 929 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 987 V 987
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 803 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 862
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 863 ELKRFLAEIDALKEK 877
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 363 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 415
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 416 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 471
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 472 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 54 (24.1 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 205 DTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
D ++L A N EQ K + +++R +LLEK+E +K+L
Sbjct: 311 DLQDEL-AGNSEQRKRL--LKERQKLLEKIEEKQKEL 344
Score = 52 (23.4 bits), Expect = 6.5e-11, Sum P(3) = 6.5e-11
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 371 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 427 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 486
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 487 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 529
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
Score = 52 (23.4 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV-RQRAELLEKVESMKKK 240
L E +KL + + +G+ QL+ + +E + RQ EL K+ +MK++
Sbjct: 232 LNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEE 287
Score = 51 (23.0 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK 219
K+S +K EE E+ + Q ++ +E K K ++ + N + Q K L E++K
Sbjct: 280 KISAMK--EEKEQLSAERQEQIKQRTKLEL--KAKDLQDELAGNSE---QRKRLLKERQK 332
Query: 220 DVERVRQRA-ELLE---KVESMKKK 240
+E++ ++ EL E K S+K+K
Sbjct: 333 LLEKIEEKQKELAETEPKFNSVKEK 357
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 861 KKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 900
+K++++ E+ L+ K LR + +IN + +M
Sbjct: 679 QKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQM 718
>UNIPROTKB|Q9UQE7 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] [GO:0036033
"mediator complex binding" evidence=IEA] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0007052 "mitotic spindle organization"
evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP;NAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0008278 "cohesin complex"
evidence=NAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007165 "signal transduction" evidence=IDA]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0007126 "meiosis" evidence=IDA]
[GO:0006275 "regulation of DNA replication" evidence=IMP]
[GO:0000785 "chromatin" evidence=IDA] [GO:0030893 "meiotic cohesin
complex" evidence=IDA] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0007067 "mitosis" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007091 "metaphase/anaphase
transition of mitotic cell cycle" evidence=TAS] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
Reactome:REACT_115566 GO:GO:0007165 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0000775 GO:GO:0051301 GO:GO:0007052
EMBL:CH471066 GO:GO:0006281 GO:GO:0000785 Reactome:REACT_111183
GO:GO:0016363 GO:GO:0005604 GO:GO:0000922 GO:GO:0003777
GO:GO:0032876 GO:GO:0007091 GO:GO:0000236 GO:GO:0045502
GO:GO:0000800 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
Orphanet:199 GO:GO:0030893 EMBL:AL359260 HOGENOM:HOG000166512
KO:K06669 OMA:NKVLEHF CTD:9126 HOVERGEN:HBG039849 OrthoDB:EOG4B5P4C
EMBL:AF020043 EMBL:AK289771 EMBL:AF067163 EMBL:AJ005015
IPI:IPI00219420 RefSeq:NP_005436.1 UniGene:Hs.24485
ProteinModelPortal:Q9UQE7 SMR:Q9UQE7 DIP:DIP-29200N IntAct:Q9UQE7
MINT:MINT-3083875 STRING:Q9UQE7 PhosphoSite:Q9UQE7 DMDM:29337005
PaxDb:Q9UQE7 PRIDE:Q9UQE7 Ensembl:ENST00000361804 GeneID:9126
KEGG:hsa:9126 UCSC:uc001kze.3 GeneCards:GC10P112318 HGNC:HGNC:2468
HPA:HPA037411 MIM:606062 MIM:610759 neXtProt:NX_Q9UQE7
PharmGKB:PA26966 InParanoid:Q9UQE7 ChiTaRS:SMC3 GenomeRNAi:9126
NextBio:34209 Bgee:Q9UQE7 CleanEx:HS_SMC3 Genevestigator:Q9UQE7
GermOnline:ENSG00000108055 Uniprot:Q9UQE7
Length = 1217
Score = 132 (51.5 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 755
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 869
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 870 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 922
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 923 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 983 FQQLV 987
++
Sbjct: 1157 VSDMI 1161
Score = 111 (44.1 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 53/240 (22%), Positives = 102/240 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Score = 87 (35.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 60/265 (22%), Positives = 110/265 (41%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREME-----NHINLRKRKLESIE-KEDDINTA 702
+ IE+ L++E+EE+ + +K RR +E +N + KL+ + K +
Sbjct: 194 KYIEERLHTLEEEKEELAQYQKWDKM-RRALEYTIYNQELNETRAKLDELSAKRETSGEK 252
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+L D D + +++ L +I + K EK S E +I KQ
Sbjct: 253 SRQLRDAQQDARDKMEDIERQVRELKTKISAMK---EEKEQLSAERQEQI-------KQR 302
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
KL L+A ++ E ++ L + ++ E I EL + + + E+ E I
Sbjct: 303 TKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGI 362
Query: 823 QD--NISQANSIFFLNQNILQEY---EHRQRQIE-DLSTKQEA--DKKE----LKRFLAE 870
+Q + + Q ++ E R + I+ +L + +A DKK + + L +
Sbjct: 363 ARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLED 422
Query: 871 IDALKEKWLPTLRNLVAQINETFSR 895
+A KEK L L +NE +R
Sbjct: 423 TEANKEKNLEQYNKLDQDLNEVKAR 447
Score = 83 (34.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 56/244 (22%), Positives = 104/244 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIE-KRK--RREMENHINLRKRKLESIEKE-DD 698
++T+ +++E +L ER+E I ++E K K + E+ + RKR L+ +K +
Sbjct: 277 LKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEK 336
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
I +L + N + K I L YA++ S +F +K E +
Sbjct: 337 IEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGS-QFTSK-EERDKW 394
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+K+ K QA D K+++ K L D + E +L+++ E+ +EEL
Sbjct: 395 IKKELKSLDQA---INDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEEL 451
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQI-----EDLSTKQEADKKEL-KRFLAEID 872
+ + + +N L E+ ++Q EDL KQ+ + K L ID
Sbjct: 452 DRKYYE-VKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGID 510
Query: 873 ALKE 876
++ +
Sbjct: 511 SINK 514
Score = 74 (31.1 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 698
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 699 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 814
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 875 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 928
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 929 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 987 V 987
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 803 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 862
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 863 ELKRFLAEIDALKEK 877
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 363 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 415
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 416 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 471
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 472 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 54 (24.1 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 205 DTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
D ++L A N EQ K + +++R +LLEK+E +K+L
Sbjct: 311 DLQDEL-AGNSEQRKRL--LKERQKLLEKIEEKQKEL 344
Score = 52 (23.4 bits), Expect = 6.5e-11, Sum P(3) = 6.5e-11
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 371 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 427 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 486
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 487 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 529
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
Score = 52 (23.4 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV-RQRAELLEKVESMKKK 240
L E +KL + + +G+ QL+ + +E + RQ EL K+ +MK++
Sbjct: 232 LNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEE 287
Score = 51 (23.0 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK 219
K+S +K EE E+ + Q ++ +E K K ++ + N + Q K L E++K
Sbjct: 280 KISAMK--EEKEQLSAERQEQIKQRTKLEL--KAKDLQDELAGNSE---QRKRLLKERQK 332
Query: 220 DVERVRQRA-ELLE---KVESMKKK 240
+E++ ++ EL E K S+K+K
Sbjct: 333 LLEKIEEKQKELAETEPKFNSVKEK 357
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 861 KKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 900
+K++++ E+ L+ K LR + +IN + +M
Sbjct: 679 QKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQM 718
>UNIPROTKB|Q5R4K5 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9601 "Pongo abelii" [GO:0000785 "chromatin"
evidence=ISS] [GO:0006275 "regulation of DNA replication"
evidence=ISS] [GO:0030893 "meiotic cohesin complex" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0051301 GO:GO:0007067 GO:GO:0007052
GO:GO:0006275 GO:GO:0006281 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 GO:GO:0030893 KO:K06669 OMA:NKVLEHF CTD:9126
HOVERGEN:HBG039849 GeneTree:ENSGT00580000081628 EMBL:CR861241
RefSeq:NP_001126947.1 UniGene:Pab.18502 ProteinModelPortal:Q5R4K5
SMR:Q5R4K5 PRIDE:Q5R4K5 Ensembl:ENSPPYT00000003185 GeneID:100173965
KEGG:pon:100173965 InParanoid:Q5R4K5 Uniprot:Q5R4K5
Length = 1217
Score = 132 (51.5 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 755
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 869
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 870 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 922
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 923 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 983 FQQLV 987
++
Sbjct: 1157 VSDMI 1161
Score = 111 (44.1 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 53/240 (22%), Positives = 102/240 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Score = 87 (35.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 60/265 (22%), Positives = 110/265 (41%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREME-----NHINLRKRKLESIE-KEDDINTA 702
+ IE+ L++E+EE+ + +K RR +E +N + KL+ + K +
Sbjct: 194 KYIEERLHTLEEEKEELAQYQKWDKM-RRALEYTIYNQELNETRAKLDELSAKRETSGEK 252
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+L D D + +++ L +I + K EK S E +I KQ
Sbjct: 253 SRQLRDAQQDARDKMEDIERQVRELKTKISAMK---EEKEQLSAERQEQI-------KQR 302
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
KL L+A ++ E ++ L + ++ E I EL + + + E+ E I
Sbjct: 303 TKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGI 362
Query: 823 QD--NISQANSIFFLNQNILQEY---EHRQRQIE-DLSTKQEA--DKKE----LKRFLAE 870
+Q + + Q ++ E R + I+ +L + +A DKK + + L +
Sbjct: 363 ARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLED 422
Query: 871 IDALKEKWLPTLRNLVAQINETFSR 895
+A KEK L L +NE +R
Sbjct: 423 TEANKEKNLEQYNKLDQDLNEVKAR 447
Score = 83 (34.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 56/244 (22%), Positives = 104/244 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIE-KRK--RREMENHINLRKRKLESIEKE-DD 698
++T+ +++E +L ER+E I ++E K K + E+ + RKR L+ +K +
Sbjct: 277 LKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEK 336
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
I +L + N + K I L YA++ S +F +K E +
Sbjct: 337 IEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGS-QFTSK-EERDKW 394
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+K+ K QA D K+++ K L D + E +L+++ E+ +EEL
Sbjct: 395 IKKELKSLDQA---INDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEEL 451
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQI-----EDLSTKQEADKKEL-KRFLAEID 872
+ + + +N L E+ ++Q EDL KQ+ + K L ID
Sbjct: 452 DRKYYE-VKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGID 510
Query: 873 ALKE 876
++ +
Sbjct: 511 SINK 514
Score = 74 (31.1 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 698
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 699 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 814
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 875 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 928
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 929 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 987 V 987
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 803 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 862
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 863 ELKRFLAEIDALKEK 877
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 363 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 415
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 416 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 471
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 472 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 54 (24.1 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 205 DTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
D ++L A N EQ K + +++R +LLEK+E +K+L
Sbjct: 311 DLQDEL-AGNSEQRKRL--LKERQKLLEKIEEKQKEL 344
Score = 52 (23.4 bits), Expect = 6.5e-11, Sum P(3) = 6.5e-11
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 371 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 427 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 486
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 487 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 529
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
Score = 52 (23.4 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV-RQRAELLEKVESMKKK 240
L E +KL + + +G+ QL+ + +E + RQ EL K+ +MK++
Sbjct: 232 LNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEE 287
Score = 51 (23.0 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK 219
K+S +K EE E+ + Q ++ +E K K ++ + N + Q K L E++K
Sbjct: 280 KISAMK--EEKEQLSAERQEQIKQRTKLEL--KAKDLQDELAGNSE---QRKRLLKERQK 332
Query: 220 DVERVRQRA-ELLE---KVESMKKK 240
+E++ ++ EL E K S+K+K
Sbjct: 333 LLEKIEEKQKELAETEPKFNSVKEK 357
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 861 KKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 900
+K++++ E+ L+ K LR + +IN + +M
Sbjct: 679 QKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQM 718
>MGI|MGI:1339795 [details] [associations]
symbol:Smc3 "structural maintenance of chromosomes 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0000785 "chromatin" evidence=ISO] [GO:0000800
"lateral element" evidence=IDA] [GO:0000922 "spindle pole"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006275 "regulation of DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IPI] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0016363 "nuclear matrix" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=IMP] [GO:0030893 "meiotic cohesin complex"
evidence=ISO;IDA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IDA] [GO:0036033 "mediator complex
binding" evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051276 "chromosome organization" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 MGI:MGI:1339795 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0005654 GO:GO:0000775 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0006275 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 Reactome:REACT_118161 Reactome:REACT_120463
Reactome:REACT_75800 GO:GO:0016363 GO:GO:0005604 GO:GO:0000922
GO:GO:0032876 GO:GO:0051276 GO:GO:0019827 GO:GO:0045502
GO:GO:0000800 eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0036033
GO:GO:0034991 PDB:2WD5 PDBsum:2WD5 HOGENOM:HOG000166512 KO:K06669
OMA:NKVLEHF CTD:9126 HOVERGEN:HBG039849 OrthoDB:EOG4B5P4C
ChiTaRS:SMC3 EMBL:AF141294 EMBL:AF047601 EMBL:Y15128 EMBL:AK005647
IPI:IPI00132122 RefSeq:NP_031816.2 UniGene:Mm.14910
ProteinModelPortal:Q9CW03 SMR:Q9CW03 DIP:DIP-57028N IntAct:Q9CW03
STRING:Q9CW03 PhosphoSite:Q9CW03 PaxDb:Q9CW03 PRIDE:Q9CW03
Ensembl:ENSMUST00000025930 GeneID:13006 KEGG:mmu:13006
GeneTree:ENSGT00580000081628 InParanoid:Q9CW03
EvolutionaryTrace:Q9CW03 NextBio:282832 Bgee:Q9CW03 CleanEx:MM_SMC3
Genevestigator:Q9CW03 GermOnline:ENSMUSG00000024974 Uniprot:Q9CW03
Length = 1217
Score = 132 (51.5 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 755
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 869
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 870 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 922
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 923 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 983 FQQLV 987
++
Sbjct: 1157 VSDMI 1161
Score = 111 (44.1 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 53/240 (22%), Positives = 102/240 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Score = 87 (35.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 60/265 (22%), Positives = 110/265 (41%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREME-----NHINLRKRKLESIE-KEDDINTA 702
+ IE+ L++E+EE+ + +K RR +E +N + KL+ + K +
Sbjct: 194 KYIEERLHTLEEEKEELAQYQKWDKM-RRALEYTIYNQELNETRAKLDELSAKRETSGEK 252
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+L D D + +++ L +I + K EK S E +I KQ
Sbjct: 253 SRQLRDAQQDARDKMEDIERQVRELKTKISAMK---EEKEQLSAERQEQI-------KQR 302
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
KL L+A ++ E ++ L + ++ E I EL + + + E+ E I
Sbjct: 303 TKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGI 362
Query: 823 QD--NISQANSIFFLNQNILQEY---EHRQRQIE-DLSTKQEA--DKKE----LKRFLAE 870
+Q + + Q ++ E R + I+ +L + +A DKK + + L +
Sbjct: 363 ARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLED 422
Query: 871 IDALKEKWLPTLRNLVAQINETFSR 895
+A KEK L L +NE +R
Sbjct: 423 TEANKEKNLEQYNKLDQDLNEVKAR 447
Score = 83 (34.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 56/244 (22%), Positives = 104/244 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIE-KRK--RREMENHINLRKRKLESIEKE-DD 698
++T+ +++E +L ER+E I ++E K K + E+ + RKR L+ +K +
Sbjct: 277 LKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEK 336
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
I +L + N + K I L YA++ S +F +K E +
Sbjct: 337 IEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGS-QFTSK-EERDKW 394
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+K+ K QA D K+++ K L D + E +L+++ E+ +EEL
Sbjct: 395 IKKELKSLDQA---INDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEEL 451
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQI-----EDLSTKQEADKKEL-KRFLAEID 872
+ + + +N L E+ ++Q EDL KQ+ + K L ID
Sbjct: 452 DRKYYE-VKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGID 510
Query: 873 ALKE 876
++ +
Sbjct: 511 SINK 514
Score = 74 (31.1 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 698
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 699 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 814
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 875 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 928
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 929 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 987 V 987
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 803 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 862
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 863 ELKRFLAEIDALKEK 877
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 363 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 415
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 416 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 471
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 472 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 54 (24.1 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 205 DTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
D ++L A N EQ K + +++R +LLEK+E +K+L
Sbjct: 311 DLQDEL-AGNSEQRKRL--LKERQKLLEKIEEKQKEL 344
Score = 52 (23.4 bits), Expect = 6.5e-11, Sum P(3) = 6.5e-11
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 371 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 427 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 486
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 487 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 529
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
Score = 52 (23.4 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV-RQRAELLEKVESMKKK 240
L E +KL + + +G+ QL+ + +E + RQ EL K+ +MK++
Sbjct: 232 LNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEE 287
Score = 51 (23.0 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK 219
K+S +K EE E+ + Q ++ +E K K ++ + N + Q K L E++K
Sbjct: 280 KISAMK--EEKEQLSAERQEQIKQRTKLEL--KAKDLQDELAGNSE---QRKRLLKERQK 332
Query: 220 DVERVRQRA-ELLE---KVESMKKK 240
+E++ ++ EL E K S+K+K
Sbjct: 333 LLEKIEEKQKELAETEPKFNSVKEK 357
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 861 KKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 900
+K++++ E+ L+ K LR + +IN + +M
Sbjct: 679 QKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQM 718
>UNIPROTKB|D4A1B9 [details] [associations]
symbol:Smc3 "Structural maintenance of chromosomes protein
3" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0036033 "mediator complex
binding" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0051276 "chromosome organization" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:62006 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0007052 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 EMBL:CH473986 GO:GO:0030893 KO:K06669 CTD:9126
OrthoDB:EOG4B5P4C GeneTree:ENSGT00580000081628 UniGene:Rn.11074
IPI:IPI00780283 RefSeq:NP_113771.2 SMR:D4A1B9
Ensembl:ENSRNOT00000019560 GeneID:29486 KEGG:rno:29486
NextBio:609354 Uniprot:D4A1B9
Length = 1217
Score = 132 (51.5 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 755
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 869
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 870 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 922
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 923 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 983 FQQLV 987
++
Sbjct: 1157 VSDMI 1161
Score = 111 (44.1 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 53/240 (22%), Positives = 102/240 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Score = 87 (35.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 60/265 (22%), Positives = 110/265 (41%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREME-----NHINLRKRKLESIE-KEDDINTA 702
+ IE+ L++E+EE+ + +K RR +E +N + KL+ + K +
Sbjct: 194 KYIEERLHTLEEEKEELAQYQKWDKM-RRALEYTIYNQELNETRAKLDELSAKRETSGEK 252
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+L D D + +++ L +I + K EK S E +I KQ
Sbjct: 253 SRQLRDAQQDARDKMEDIERQVRELKTKISAMK---EEKEQLSAERQEQI-------KQR 302
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
KL L+A ++ E ++ L + ++ E I EL + + + E+ E I
Sbjct: 303 TKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGI 362
Query: 823 QD--NISQANSIFFLNQNILQEY---EHRQRQIE-DLSTKQEA--DKKE----LKRFLAE 870
+Q + + Q ++ E R + I+ +L + +A DKK + + L +
Sbjct: 363 ARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLED 422
Query: 871 IDALKEKWLPTLRNLVAQINETFSR 895
+A KEK L L +NE +R
Sbjct: 423 TEANKEKNLEQYNKLDQDLNEVKAR 447
Score = 83 (34.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 56/244 (22%), Positives = 104/244 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIE-KRK--RREMENHINLRKRKLESIEKE-DD 698
++T+ +++E +L ER+E I ++E K K + E+ + RKR L+ +K +
Sbjct: 277 LKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEK 336
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
I +L + N + K I L YA++ S +F +K E +
Sbjct: 337 IEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGS-QFTSK-EERDKW 394
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+K+ K QA D K+++ K L D + E +L+++ E+ +EEL
Sbjct: 395 IKKELKSLDQA---INDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEEL 451
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQI-----EDLSTKQEADKKEL-KRFLAEID 872
+ + + +N L E+ ++Q EDL KQ+ + K L ID
Sbjct: 452 DRKYYE-VKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGID 510
Query: 873 ALKE 876
++ +
Sbjct: 511 SINK 514
Score = 74 (31.1 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 698
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 699 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 814
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 875 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 928
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 929 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 987 V 987
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 803 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 862
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 863 ELKRFLAEIDALKEK 877
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 363 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 415
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 416 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 471
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 472 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 54 (24.1 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 205 DTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
D ++L A N EQ K + +++R +LLEK+E +K+L
Sbjct: 311 DLQDEL-AGNSEQRKRL--LKERQKLLEKIEEKQKEL 344
Score = 52 (23.4 bits), Expect = 6.5e-11, Sum P(3) = 6.5e-11
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 371 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 427 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 486
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 487 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 529
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
Score = 52 (23.4 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV-RQRAELLEKVESMKKK 240
L E +KL + + +G+ QL+ + +E + RQ EL K+ +MK++
Sbjct: 232 LNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEE 287
Score = 51 (23.0 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK 219
K+S +K EE E+ + Q ++ +E K K ++ + N + Q K L E++K
Sbjct: 280 KISAMK--EEKEQLSAERQEQIKQRTKLEL--KAKDLQDELAGNSE---QRKRLLKERQK 332
Query: 220 DVERVRQRA-ELLE---KVESMKKK 240
+E++ ++ EL E K S+K+K
Sbjct: 333 LLEKIEEKQKELAETEPKFNSVKEK 357
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 861 KKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 900
+K++++ E+ L+ K LR + +IN + +M
Sbjct: 679 QKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQM 718
>UNIPROTKB|O97594 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0030893 "meiotic cohesin complex"
evidence=ISS] [GO:0000785 "chromatin" evidence=ISS] [GO:0006275
"regulation of DNA replication" evidence=ISS] [GO:0000922 "spindle
pole" evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0016363 "nuclear matrix" evidence=ISS] [GO:0007052 "mitotic
spindle organization" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0045502 "dynein binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051276 "chromosome organization" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0000775 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0006275 GO:GO:0006281 GO:GO:0000785
GO:GO:0016363 GO:GO:0000922 GO:GO:0051276 GO:GO:0045502
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
KO:K06669 EMBL:AF072713 IPI:IPI00698576 RefSeq:NP_776720.1
UniGene:Bt.5290 ProteinModelPortal:O97594 STRING:O97594
PRIDE:O97594 GeneID:281729 KEGG:bta:281729 CTD:9126
HOVERGEN:HBG039849 InParanoid:O97594 OrthoDB:EOG4B5P4C
NextBio:20805649 Uniprot:O97594
Length = 1218
Score = 132 (51.5 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 86/366 (23%), Positives = 149/366 (40%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 755
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 869
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 870 EIDALKEKWLPTLRNLVAQINETFSRN----FQEMAVA-GEVSLDEHES--DFDKF-GIL 921
+ +K +P + + R +E V GE S D+F G+
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKRRXERQSGLRMKEKGVVKGERGSGPQSSVPSVDQFTGVG 1098
Query: 922 IKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERK 981
I+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 IRVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRK 1156
Query: 982 MFQQLV 987
++
Sbjct: 1157 AVSDMI 1162
Score = 111 (44.1 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 53/240 (22%), Positives = 102/240 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Score = 87 (35.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 60/265 (22%), Positives = 110/265 (41%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREME-----NHINLRKRKLESIE-KEDDINTA 702
+ IE+ L++E+EE+ + +K RR +E +N + KL+ + K +
Sbjct: 194 KYIEERLHTLEEEKEELAQYQKWDKM-RRALEYTIYNQELNETRAKLDELSAKRETSGEK 252
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+L D D + +++ L +I + K EK S E +I KQ
Sbjct: 253 SRQLRDAQQDARDKMEDIERQVRELKTKISAMK---EEKEQLSAERQEQI-------KQR 302
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
KL L+A ++ E ++ L + ++ E I EL + + + E+ E I
Sbjct: 303 TKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGI 362
Query: 823 QD--NISQANSIFFLNQNILQEY---EHRQRQIE-DLSTKQEA--DKKE----LKRFLAE 870
+Q + + Q ++ E R + I+ +L + +A DKK + + L +
Sbjct: 363 ARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLED 422
Query: 871 IDALKEKWLPTLRNLVAQINETFSR 895
+A KEK L L +NE +R
Sbjct: 423 TEANKEKNLEQYNKLDQDLNEVKAR 447
Score = 83 (34.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 56/244 (22%), Positives = 104/244 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIE-KRK--RREMENHINLRKRKLESIEKE-DD 698
++T+ +++E +L ER+E I ++E K K + E+ + RKR L+ +K +
Sbjct: 277 LKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEK 336
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
I +L + N + K I L YA++ S +F +K E +
Sbjct: 337 IEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGS-QFTSK-EERDKW 394
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+K+ K QA D K+++ K L D + E +L+++ E+ +EEL
Sbjct: 395 IKKELKSLDQA---INDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEEL 451
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQI-----EDLSTKQEADKKEL-KRFLAEID 872
+ + + +N L E+ ++Q EDL KQ+ + K L ID
Sbjct: 452 DRKYYE-VKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGID 510
Query: 873 ALKE 876
++ +
Sbjct: 511 SINK 514
Score = 74 (31.1 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 698
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 699 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 814
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 875 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 928
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 929 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 987 V 987
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 803 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 862
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 863 ELKRFLAEIDALKEK 877
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 363 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 415
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 416 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 471
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 472 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 54 (24.1 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 205 DTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
D ++L A N EQ K + +++R +LLEK+E +K+L
Sbjct: 311 DLQDEL-AGNSEQRKRL--LKERQKLLEKIEEKQKEL 344
Score = 52 (23.4 bits), Expect = 6.5e-11, Sum P(3) = 6.5e-11
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 371 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 427 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 486
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 487 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 529
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
Score = 52 (23.4 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV-RQRAELLEKVESMKKK 240
L E +KL + + +G+ QL+ + +E + RQ EL K+ +MK++
Sbjct: 232 LNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEE 287
Score = 51 (23.0 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK 219
K+S +K EE E+ + Q ++ +E K K ++ + N + Q K L E++K
Sbjct: 280 KISAMK--EEKEQLSAERQEQIKQRTKLEL--KAKDLQDELAGNSE---QRKRLLKERQK 332
Query: 220 DVERVRQRA-ELLE---KVESMKKK 240
+E++ ++ EL E K S+K+K
Sbjct: 333 LLEKIEEKQKELAETEPKFNSVKEK 357
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 861 KKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 900
+K++++ E+ L+ K LR + +IN + +M
Sbjct: 679 QKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQM 718
>UNIPROTKB|E1C612 [details] [associations]
symbol:E1C612 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00819262
Ensembl:ENSGALT00000037609 ArrayExpress:E1C612 Uniprot:E1C612
Length = 1173
Score = 131 (51.2 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 73/350 (20%), Positives = 147/350 (42%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESI---EKEDDINTALAKL 706
I++ KL +++ + + K K++E+E + L + K E ++ + A+A L
Sbjct: 772 IKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 831
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK------HMASIE-FDAKIRELEFNL 759
+Q + L + K +KN E+ S K AE+ A IE + + EL +
Sbjct: 832 KEQVSALEAEAVKTRESLKNAENELSSEKGLMAERTKDIKAKSAKIEKYREQNNELNYFK 891
Query: 760 K--QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
+ Q EK + + ++ K +++ K + E + E T ++
Sbjct: 892 EGDQWEKKQKHSDVMDKNLKNKLDKLLKEYKWIASEKELFGQADTTYDFEANNPKETGQK 951
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
L+ + S+ N+L E E +R+ DL K+ + + + LA I+ L K
Sbjct: 952 LQKLLTKKEKLEKSLNMRAMNLLSEAE--ERKYNDLMKKKRIVENDKIKILATIEELDRK 1009
Query: 878 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS-GQLEVLS 936
L ++N+ F F + + L + K IL ++FR G + +
Sbjct: 1010 KNKALHIAWEKVNKDFGSIFSMLLPGAKAMLVPSK----KQNILDGLEFRVGLGDIWKEN 1065
Query: 937 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
SGG+RS++ + ++++ P ++DE++ +D + + + Q L
Sbjct: 1066 LTELSGGQRSLAALSLILAILLFKPAPIYILDEVDAALDLSHTQNIGQML 1115
Score = 118 (46.6 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 52/226 (23%), Positives = 104/226 (46%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISLRGDTKE 103
N + G NGSGKS+++ +I LG RA+S+ V + ++G K +S+ D +
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDLVYKNGQAGVNKATVSITFDNSD 87
Query: 104 -----------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFL-- 150
+ +TI R++ ++++ NG V ++ + VNN FL
Sbjct: 88 KKNSPLGFENNDEITITRQVIVGGRNKYLINGMNASNNRVQDLFGSVGLNVNN-PHFLIM 146
Query: 151 PQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
Q ++ + + P ++L E+A G + C K + KTIE + L+++
Sbjct: 147 QQGQITKVLNMKPTEILAMIEEAAGTR---MYECM---KITAHKTIE----KKESKLDEI 196
Query: 211 KALNVEQ-EKDVERVRQ-RAELLEKVESMKKKLPWLKYDMKKAEYI 254
+ + E+ +E++++ RA LE + M +++ L+ +Y+
Sbjct: 197 RRIITEEISPTLEKLKEARASYLE-YQKMTREVENLRRIYVAFQYV 241
Score = 81 (33.6 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 51/217 (23%), Positives = 93/217 (42%)
Query: 677 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 736
R+ E+ + ++ +LE+ EKE LA L + A Q K E+K+ E++ K
Sbjct: 663 RDAEDELKIKTSQLEATEKE------LANLKNMAE--KYQHLKQQWEMKSEEAELLQTKI 714
Query: 737 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCK-----------KEVEH 782
+ H + A I E E LK+ E+ +A Y+ + KE+++
Sbjct: 715 QQSAYHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKALENKMKNAEAERGKEIKN 774
Query: 783 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 842
++ L+ AK++A+ + +++++ E+ + ELE Q+ S Q I
Sbjct: 775 AQQKLNSAKKKADDSS---RKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 831
Query: 843 YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 879
E Q+ L + ++ LK AE + EK L
Sbjct: 832 KE----QVSALEAEAVKTRESLKN--AENELSSEKGL 862
Score = 66 (28.3 bits), Expect = 9.4e-06, Sum P(3) = 9.4e-06
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
E + I T ++ D + +LK EQE + + +Q + L E ES++ K P+
Sbjct: 427 EDQEAFEAIRKTKEKLQDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKHPY 486
Query: 244 LKYDMKKAE 252
L+++ K E
Sbjct: 487 LRFEYKNPE 495
Score = 53 (23.7 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 12/41 (29%), Positives = 28/41 (68%)
Query: 384 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
QAN+K++ +S E N+ K+ ++ + ++++ E KNN+++
Sbjct: 258 QANKKKIFESMAE---NEKKV--KELAQQIEETEKKNNEVI 293
Score = 52 (23.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 37/155 (23%), Positives = 67/155 (43%)
Query: 105 HLT-IMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLT---QFLPQ--DRVCEF 158
H+T I+ K+ T +E ++ K LE T++ + N+ Q L Q + E
Sbjct: 651 HVTPILSKLKTMRDAE----DELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEE 706
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQ 217
A+L K+ + + L ++ + E LK E + +R + + KAL N +
Sbjct: 707 AELLQTKIQQSAYHKQQEDLLALKK-TIAECEETLKKTEES-QRKAE--EEYKALENKMK 762
Query: 218 EKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ ER ++ +K+ S KKK MK+ +
Sbjct: 763 NAEAERGKEIKNAQQKLNSAKKKADDSSRKMKEKQ 797
Score = 46 (21.3 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
+++L+ +Q Q K ++E +L K T+ +C + LK E+ K
Sbjct: 707 AELLQTKIQ--QSAYHK-QQEDLLALKK-TIAECEETLKKTEESQRK 749
Score = 44 (20.5 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 652 EDEAA--KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE 694
ED+ A ++K +E++ + +++K K E E +L K+K S E
Sbjct: 427 EDQEAFEAIRKTKEKLQD--EMKKLKYEEAEQEAHLAKKKQLSSE 469
>UNIPROTKB|E1C782 [details] [associations]
symbol:E1C782 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
IPI:IPI00579121 EMBL:AADN02057751 EMBL:AADN02057752
EMBL:AADN02057753 EMBL:AADN02057754 EMBL:AADN02057755
Ensembl:ENSGALT00000025306 ArrayExpress:E1C782 Uniprot:E1C782
Length = 1190
Score = 126 (49.4 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 78/355 (21%), Positives = 154/355 (43%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESI---EKEDDINTALAKL 706
I++ KL +++ + + K K++E+E + L + K E ++ + A+A L
Sbjct: 791 IKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 850
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 766
+Q + L + K +KN E+ S K AE+ + + AK ++E +Q+ +L
Sbjct: 851 KEQVSALEAEAVKTRESLKNAENELSSEKGLMAER---TKDIKAKSAKIEKYREQNNELI 907
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIA--FITPELEKEFLEMPTTIEELEA---- 820
+ D + E +KH SD + + + + EKE T + EA
Sbjct: 908 HRNYFKEGD---QWEKKQKH-SDVMDKLDKLLKEYKWIASEKELFGQADTTYDFEANNPK 963
Query: 821 ----AIQDNISQANSIF-FLNQ---NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 872
+Q +++ + LN N+L E E +R+ DL K+ + + + LA I+
Sbjct: 964 ETGQKLQKLLTKKEKLEKSLNMRAMNLLSEAE--ERKYNDLMKKKRIVENDKIKILATIE 1021
Query: 873 ALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS-GQ 931
L K L ++N+ F F + + L + K IL ++FR G
Sbjct: 1022 ELDRKKNKALHIAWEKVNKDFGSIFSMLLPGAKAMLVPSK----KQNILDGLEFRVGLGD 1077
Query: 932 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
+ + SGG+RS++ + ++++ P ++DE++ +D + + + Q L
Sbjct: 1078 IWKENLTELSGGQRSLAALSLILAILLFKPAPIYILDEVDAALDLSHTQNIGQML 1132
Score = 118 (46.6 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 52/226 (23%), Positives = 104/226 (46%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISLRGDTKE 103
N + G NGSGKS+++ +I LG RA+S+ V + ++G K +S+ D +
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDLVYKNGQAGVNKATVSITFDNSD 87
Query: 104 -----------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFL-- 150
+ +TI R++ ++++ NG V ++ + VNN FL
Sbjct: 88 KKNSPLGFENNDEITITRQVIVGGRNKYLINGMNASNNRVQDLFGSVGLNVNN-PHFLIM 146
Query: 151 PQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
Q ++ + + P ++L E+A G + C K + KTIE + L+++
Sbjct: 147 QQGQITKVLNMKPTEILAMIEEAAGTR---MYECM---KITAHKTIE----KKESKLDEI 196
Query: 211 KALNVEQ-EKDVERVRQ-RAELLEKVESMKKKLPWLKYDMKKAEYI 254
+ + E+ +E++++ RA LE + M +++ L+ +Y+
Sbjct: 197 RRIITEEISPTLEKLKEARASYLE-YQKMTREVENLRRIYVAFQYV 241
Score = 91 (37.1 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 62/266 (23%), Positives = 109/266 (40%)
Query: 677 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 736
R+ E+ + ++ +LE+ EKE LA L + A Q K E+K+ E++ K
Sbjct: 682 RDAEDELKIKTSQLEATEKE------LANLKNMAE--KYQHLKQQWEMKSEEAELLQTKI 733
Query: 737 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCK-----------KEVEH 782
+ H + A I E E LK+ E+ +A Y+ + KE+++
Sbjct: 734 QQSAYHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKALENKMKNAEAERGKEIKN 793
Query: 783 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL--EAAIQDNISQA--NSIFFLNQN 838
++ L+ AK++A+ + E ++E + +E+L E A S+A +I L +
Sbjct: 794 AQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASLKEQ 853
Query: 839 ILQEYEHRQRQIEDLSTKQEADKKELKRFLAE-IDALKEKWLPTLRNLVAQINETFSRNF 897
+ + E L + E K +AE +K K + Q NE RN+
Sbjct: 854 VSALEAEAVKTRESLKNAENELSSE-KGLMAERTKDIKAK-SAKIEKYREQNNELIHRNY 911
Query: 898 QEMAVAGEVSLDEHESDFDKFGILIK 923
+ E +H DK L+K
Sbjct: 912 FKEGDQWEKK-QKHSDVMDKLDKLLK 936
Score = 66 (28.3 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
E + I T ++ D + +LK EQE + + +Q + L E ES++ K P+
Sbjct: 446 EDQEAFEAIRKTKEKLQDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKHPY 505
Query: 244 LKYDMKKAE 252
L+++ K E
Sbjct: 506 LRFEYKNPE 514
Score = 58 (25.5 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 22/89 (24%), Positives = 45/89 (50%)
Query: 384 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA-LRNSGAENIFEAYCWL 442
QAN+K++ +S E N+ K+ ++ + ++++ E KNN++ + L + + E C +
Sbjct: 258 QANKKKIFESMAE---NEKKV--KELAQQIEETEKKNNEVNYPKLTKTCKDRSLEGVC-V 311
Query: 443 QQHRHELNKEAYGPVLLEVNVSNRAHANY 471
H L E ++EV + +NY
Sbjct: 312 SDKMH-LKWEILMTSVMEVEKRDSNLSNY 339
Score = 57 (25.1 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 152 QDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
Q + F LSPV L+ + A+ + C ++ KLK + +K + ++
Sbjct: 387 QKSLTHFMLLSPVSLVLRAKAAICHS---CKQC--LQAQMKLKYAQQELKTKQAEVKKMD 441
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
E ++ E +R+ E L+ + MKK LKY+ + E
Sbjct: 442 GSYKEDQEAFEAIRKTKEKLQ--DEMKK----LKYEEAEQE 476
Score = 52 (23.4 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 37/155 (23%), Positives = 67/155 (43%)
Query: 105 HLT-IMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLT---QFLPQ--DRVCEF 158
H+T I+ K+ T +E ++ K LE T++ + N+ Q L Q + E
Sbjct: 670 HVTPILSKLKTMRDAE----DELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEE 725
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQ 217
A+L K+ + + L ++ + E LK E + +R + + KAL N +
Sbjct: 726 AELLQTKIQQSAYHKQQEDLLALKK-TIAECEETLKKTEES-QRKAE--EEYKALENKMK 781
Query: 218 EKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ ER ++ +K+ S KKK MK+ +
Sbjct: 782 NAEAERGKEIKNAQQKLNSAKKKADDSSRKMKEKQ 816
Score = 46 (21.3 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
+++L+ +Q Q K ++E +L K T+ +C + LK E+ K
Sbjct: 726 AELLQTKIQ--QSAYHK-QQEDLLALKK-TIAECEETLKKTEESQRK 768
>UNIPROTKB|F1NDN4 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 EMBL:AADN02021066
IPI:IPI00684483 Ensembl:ENSGALT00000032997 ArrayExpress:F1NDN4
Uniprot:F1NDN4
Length = 1274
Score = 138 (53.6 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 76/345 (22%), Positives = 153/345 (44%)
Query: 652 EDEAAKLQKEREEIINIV---QIE----KRKRREMENHINLRKRKLESIEKE-DDINTAL 703
+D+ K+ +E +E + + Q+ R ++ E+ + ++++ EKE D+ L
Sbjct: 874 QDKVDKINQEIDECTSAITKAQVAIKTAHRNLKKSEDSVLRTEKEIGDNEKEIKDLTEEL 933
Query: 704 AKLVDQAAD-LN-IQQFKYAI-----EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 756
L D+A + LN +Q + A+ E +NLL E+ + + E ++ KI +++
Sbjct: 934 TTLEDKATEVLNDCRQAEEALPAVQEEHRNLLQEMRAIQDDEHELRKEALNIKFKIEQID 993
Query: 757 FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 816
++ H Q+ + Y +KE+ H + K E + ++ E E E ++ P I
Sbjct: 994 SHISTH-----QSKIKY--WQKEISKLSLHPIEDK-PPEELPVLSQE-ELEAIKDPDIIT 1044
Query: 817 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEAD----KKELKRFLAEID 872
A ++ + N + EY R+ E+L K+ A+ E RF +
Sbjct: 1045 NQIALLEAQCHEMKP----NLGAIAEY----RRKEELYLKRVAELDDITNERDRFRQAFE 1096
Query: 873 ALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSG 930
L+++ L I N+Q + + G+ L+ +S D F GI+ V+ +
Sbjct: 1097 DLRKQRLNEFMAGFNVITNKLKENYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKS 1155
Query: 931 QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
++ + SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1156 WKKIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1197
Score = 106 (42.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 41/188 (21%), Positives = 87/188 (46%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI------NLRKR------KLESIEKE 696
+++E E L+ ++ + I + +E + +E +NHI +L+KR + E+I+KE
Sbjct: 260 KMVEKEKDALEGDKNKAIEFLSLENKMFKE-KNHICQYYIYDLQKRINDLETQKENIQKE 318
Query: 697 D-DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL 755
DIN +KL D+ + +I + V I K + + + ++ K++
Sbjct: 319 TKDINEKSSKLADEMKSKSKALKDLEKKIDKITVLIEENKNKFTQLDLQDVKVREKLKHA 378
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 815
+ K+ EK + E+ K K++SDA + E + + E++ ++ +++
Sbjct: 379 KSKAKKLEKQLQKDKEKVEELKNVPSSSEKNISDATSKKELLEKAKDKEEEKLKQVMSSL 438
Query: 816 EELEAAIQ 823
+E IQ
Sbjct: 439 QEETREIQ 446
Score = 105 (42.0 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 53/215 (24%), Positives = 91/215 (42%)
Query: 44 RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--------- 94
R + +IGPNGSGKS+++ A+ G Q + R+ + + EE I+
Sbjct: 78 RFSCIIGPNGSGKSNVIDAMLFVFGYRAQKI-RSKKLSVLIHNSEEHTDIQSCSVEVHFQ 136
Query: 95 --ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQ 148
I GD E + + R N S + NGK +V + + I +++
Sbjct: 137 KIIDKEGDDYEVIPNSNFCVSRTAYRDNSSVYHINGKKSTFKDVGILLRSHGIDLDHNRF 196
Query: 149 FLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL-KTIECTVKRNGDTL 207
+ Q V + A + P E E + + + L L + +E ++ G+ L
Sbjct: 197 LILQGEVEQIAMMKPKGQTEHDEGMLEYLEDLIGSARLRAPIQTLCRRVETLNEQRGEKL 256
Query: 208 NQLKALNVEQEKD-VERVRQRA-ELLEKVESMKKK 240
N++K VE+EKD +E + +A E L M K+
Sbjct: 257 NRVKM--VEKEKDALEGDKNKAIEFLSLENKMFKE 289
Score = 91 (37.1 bits), Expect = 7.8e-07, Sum P(4) = 7.8e-07
Identities = 50/230 (21%), Positives = 99/230 (43%)
Query: 660 KEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQAADLNIQQF 718
KE E + +K K++E+E +N K+ E + E+ + + + +L + D N ++
Sbjct: 811 KELEANVTAAAPDKNKQKELEKVLNSYKKDYERVSEQAGKMESEVKRLHNLIIDFNNRKL 870
Query: 719 KYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 777
K + + + EI C + + +A I+ NLK+ E L+ D +
Sbjct: 871 KTQQDKVDKINQEIDECTSAITKAQVA-------IKTAHRNLKKSEDSVLRTEKEIGDNE 923
Query: 778 KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ 837
KE++ + L+ + +A + + E+ +P EE +Q+ + + L +
Sbjct: 924 KEIKDLTEELTTLEDKATEVLNDCRQAEEA---LPAVQEEHRNLLQEMRAIQDDEHELRK 980
Query: 838 NILQEYEHRQRQIED-LSTKQEADK---KELKRF-LAEIDALKEKWLPTL 882
L + + QI+ +ST Q K KE+ + L I+ + LP L
Sbjct: 981 EALN-IKFKIEQIDSHISTHQSKIKYWQKEISKLSLHPIEDKPPEELPVL 1029
Score = 88 (36.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 67/332 (20%), Positives = 142/332 (42%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQ 709
+E + +QKE ++I K ++ + + + + L+ +EK+ D I + + ++
Sbjct: 308 LETQKENIQKETKDI-------NEKSSKLADEMKSKSKALKDLEKKIDKITVLIEENKNK 360
Query: 710 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 769
L++Q K ++K+ + + +K +E +++ + + +++ A
Sbjct: 361 FTQLDLQDVKVREKLKHAKSKAKKLE-KQLQKDKEKVE---ELKNVPSSSEKNISDATSK 416
Query: 770 SLHYEDCK-KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ 828
E K KE E ++ +S + + I EKE +E T+ + + + +++Q
Sbjct: 417 KELLEKAKDKEEEKLKQVMSSLQEETREIQKEKEGKEKELMEFCKTVNDARSKM--DVAQ 474
Query: 829 ANSIFFL---NQNILQEYEHRQRQI---EDLSTKQEADKK-ELKRFLAEIDALKEKWLPT 881
A +L N + Q E ++ + E L ++ A K ++K AE + LKEK
Sbjct: 475 AELDIYLTRYNTAVSQLDEAKEALMTTSETLKQRKAAIKDIDIKLPTAEQE-LKEKENKL 533
Query: 882 LRNLVAQIN-ETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQ 940
+ ++N + RN ++ + SL +H S L++ K +SG + S H
Sbjct: 534 EKLKKEELNAQDLVRNLRQKVEEAKSSLAQHRSRGKVLEALLEQK--RSGSI---SGIHG 588
Query: 941 SGGERSVSTILYLVSLQD-LTNCPFRVVDEIN 971
G+ Y V++ + VVD I+
Sbjct: 589 RLGDLGAIDEKYDVAISSSCAALDYIVVDTID 620
Score = 85 (35.0 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 51/226 (22%), Positives = 89/226 (39%)
Query: 778 KEVEHCRKHLS-DAKR--QAESIAFITPE----LEKEFLEMPTTIEELEAAIQD----NI 826
+EV L D++R Q E F E L+K EM T+E+ A+IQ I
Sbjct: 745 EEVNRLESELQRDSQRAVQCEEEKFQLEEDITKLQKNVREMRNTLEKYTASIQSFSEQEI 804
Query: 827 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLV 886
+ L N+ + +Q ++L + KK+ +R ++E E + L NL+
Sbjct: 805 RLKGQVKELEANVTAAAPDKNKQ-KELEKVLNSYKKDYER-VSEQAGKMESEVKRLHNLI 862
Query: 887 AQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLE--VLSAHHQSG-G 943
N + Q+ +DE S K + IK R + E VL + G
Sbjct: 863 IDFNNRKLKTQQDKVDKINQEIDECTSAITKAQVAIKTAHRNLKKSEDSVLRTEKEIGDN 922
Query: 944 ERSVSTILY-LVSLQDLTNCPFRVVDEINQGMDPINE--RKMFQQL 986
E+ + + L +L+D + + + + E R + Q++
Sbjct: 923 EKEIKDLTEELTTLEDKATEVLNDCRQAEEALPAVQEEHRNLLQEM 968
Score = 81 (33.6 bits), Expect = 7.2e-06, Sum P(4) = 7.2e-06
Identities = 25/141 (17%), Positives = 63/141 (44%)
Query: 751 KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 810
++ LE L++ + A+Q ++++ +K++ + + E ++ +
Sbjct: 746 EVNRLESELQRDSQRAVQCEEEKFQLEEDITKLQKNVREMRNTLEKYTASIQSFSEQEIR 805
Query: 811 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 870
+ ++ELEA + N L + +L Y+ ++ + + K E++ K L + +
Sbjct: 806 LKGQVKELEANVTAAAPDKNKQKEL-EKVLNSYKKDYERVSEQAGKMESEVKRLHNLIID 864
Query: 871 IDALKEKWLPTLRNLVAQINE 891
+ K L T ++ V +IN+
Sbjct: 865 FNNRK---LKTQQDKVDKINQ 882
Score = 72 (30.4 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 43/204 (21%), Positives = 81/204 (39%)
Query: 272 NTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS--KRRMDFLEKVDXXXXXXXXKYKX 329
NTL +++ I+ +++ L G K+L + + + K + LEKV YK
Sbjct: 787 NTLEKYTASIQSFSEQEIRLKGQVKELEANVTAAAPDKNKQKELEKV-------LNSYKK 839
Query: 330 XXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKI----EKLGSQIL--ELGV 383
+K R + + + DKI ++ S I ++ +
Sbjct: 840 DYERVSEQAGKMESEVK-RLHNLIIDFNNRKLKTQQDKVDKINQEIDECTSAITKAQVAI 898
Query: 384 QANQKRLQKSEK-----EKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA------ 432
+ + L+KSE EK + N+ ++ ++ L +EDK ++L+ R +
Sbjct: 899 KTAHRNLKKSEDSVLRTEKEIGDNEKEIKDLTEELTTLEDKATEVLNDCRQAEEALPAVQ 958
Query: 433 ---ENIFEAYCWLQQHRHELNKEA 453
N+ + +Q HEL KEA
Sbjct: 959 EEHRNLLQEMRAIQDDEHELRKEA 982
Score = 71 (30.1 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 166 LLEETEKAVGDPQLPVQHCALVEK----SSKLKTIECTVKRNGDTLNQLKALNVEQEKDV 221
L+EE + QL +Q + EK SK K +E ++++ + + +LK + EK++
Sbjct: 353 LIEENKNKF--TQLDLQDVKVREKLKHAKSKAKKLEKQLQKDKEKVEELKNVPSSSEKNI 410
Query: 222 ERVRQRAELLEKVESMKKK 240
+ ELLEK + +++
Sbjct: 411 SDATSKKELLEKAKDKEEE 429
Score = 66 (28.3 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 49/197 (24%), Positives = 93/197 (47%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 706
E R I+D+ +L+KE +NI K K ++++HI+ + K++ +KE +L +
Sbjct: 967 EMRAIQDDEHELRKEA---LNI----KFKIEQIDSHISTHQSKIKYWQKEIS-KLSLHPI 1018
Query: 707 VDQAAD-LNI--QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
D+ + L + Q+ AI+ +++ ++ A+ H A I E ++ E
Sbjct: 1019 EDKPPEELPVLSQEELEAIKDPDIITNQIALL--EAQCHEMKPNLGA-IAEY----RRKE 1071
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQA--ESIA-F--ITPELEKEFLEMPTTIEEL 818
+L L+ +D E + R+ D ++Q E +A F IT +L KE +M T +
Sbjct: 1072 ELYLKRVAELDDITNERDRFRQAFEDLRKQRLNEFMAGFNVITNKL-KENYQMLTLGGDA 1130
Query: 819 EAAIQDNISQ-ANSIFF 834
E + D++ + I F
Sbjct: 1131 ELELVDSLDPFSEGIMF 1147
Score = 65 (27.9 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 47/236 (19%), Positives = 100/236 (42%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTALAKL 706
QR ++ E K Q E E+I + + + R +E + +++ + I + + A +
Sbjct: 759 QRAVQCEEEKFQLE-EDITKLQKNVREMRNTLEKYTASIQSFSEQEIRLKGQVKELEANV 817
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAK-IREL--EFN---LK 760
A D N Q+ E++ +L + + +E + K + L +FN LK
Sbjct: 818 TAAAPDKNKQK-----ELEKVLNSYKK-DYERVSEQAGKMESEVKRLHNLIIDFNNRKLK 871
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDA----KRQAESIAFITPEL---EKEFLEMP- 812
+ + + ++C + + + A K+ +S+ E+ EKE ++
Sbjct: 872 TQQDKVDKINQEIDECTSAITKAQVAIKTAHRNLKKSEDSVLRTEKEIGDNEKEIKDLTE 931
Query: 813 --TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
TT+E+ + ++ QA +QE EHR ++++ Q+ D+ EL++
Sbjct: 932 ELTTLEDKATEVLNDCRQAEEAL----PAVQE-EHRNL-LQEMRAIQD-DEHELRK 980
Score = 62 (26.9 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 19/82 (23%), Positives = 41/82 (50%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
K + E + D ++ + AL + K+ I ++ N + QL +V+ + ++
Sbjct: 320 KDINEKSSKLAD-EMKSKSKALKDLEKKIDKITVLIEENKNKFTQLDLQDVKVREKLKHA 378
Query: 225 RQRAELLEK-VESMKKKLPWLK 245
+ +A+ LEK ++ K+K+ LK
Sbjct: 379 KSKAKKLEKQLQKDKEKVEELK 400
Score = 61 (26.5 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 31/158 (19%), Positives = 69/158 (43%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITK-RFNIQV 143
K E+ + SL+ +T+E I ++ + + K F V +++ + +I +
Sbjct: 426 KEEEKLKQVMSSLQEETRE----IQKEKEGKEKELMEFCKTVNDARSKMDVAQAELDIYL 481
Query: 144 NNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDP--QLPVQHCALVEKSSKLKTIECTVK 201
+ Q + A ++ + L++ + A+ D +LP L EK +KL+ ++
Sbjct: 482 TRYNTAVSQLDEAKEALMTTSETLKQRKAAIKDIDIKLPTAEQELKEKENKLEKLKKEEL 541
Query: 202 RNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
D + L+ E + + + R R ++LE + K+
Sbjct: 542 NAQDLVRNLRQKVEEAKSSLAQHRSRGKVLEALLEQKR 579
Score = 59 (25.8 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 387 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHR 446
+K+LQK +KEK+ + K + D K +LL ++ E + + LQ+
Sbjct: 386 EKQLQK-DKEKV-EELKNVPSSSEKNISDATSKK-ELLEKAKDKEEEKLKQVMSSLQEET 442
Query: 447 HELNKEAYG 455
E+ KE G
Sbjct: 443 REIQKEKEG 451
Score = 47 (21.6 bits), Expect = 2.0e-10, Sum P(4) = 2.0e-10
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 383 VQANQKRLQKSEKEKILNQNKLT--LRQCSDRLKDMEDKNNKL 423
++ ++ +QK K+ +KL ++ S LKD+E K +K+
Sbjct: 308 LETQKENIQKETKDINEKSSKLADEMKSKSKALKDLEKKIDKI 350
Score = 45 (20.9 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREME 680
EQ L E E KL+K ++E +N + + R+++E
Sbjct: 523 EQELKEKEN-KLEKLKKEELNAQDLVRNLRQKVE 555
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 24/100 (24%), Positives = 42/100 (42%)
Query: 226 QRAELLEKVESMKKKLPWLKYDMKKA-EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGK 284
QR E L +V+ ++K+ L+ D KA E++ +++ K I
Sbjct: 251 QRGEKLNRVKMVEKEKDALEGDKNKAIEFLSLENKMFKEKNHICQYY--IYDLQKRINDL 308
Query: 285 KQEKAILDGDCK----KLSSLINE---NSKRRMDFLEKVD 317
+ +K + + K K S L +E SK D +K+D
Sbjct: 309 ETQKENIQKETKDINEKSSKLADEMKSKSKALKDLEKKID 348
Score = 38 (18.4 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 379 LELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENI 435
LE +Q + +R + E+EK + +T Q +++M + K ++++ + I
Sbjct: 750 LESELQRDSQRAVQCEEEKFQLEEDITKLQ--KNVREMRNTLEKYTASIQSFSEQEI 804
>UNIPROTKB|F1P3C6 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9031 "Gallus gallus" [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 OMA:IAIEFLT
EMBL:AADN02021066 IPI:IPI00573837 Ensembl:ENSGALT00000015551
ArrayExpress:F1P3C6 Uniprot:F1P3C6
Length = 1300
Score = 138 (53.6 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 76/345 (22%), Positives = 153/345 (44%)
Query: 652 EDEAAKLQKEREEIINIV---QIE----KRKRREMENHINLRKRKLESIEKE-DDINTAL 703
+D+ K+ +E +E + + Q+ R ++ E+ + ++++ EKE D+ L
Sbjct: 900 QDKVDKINQEIDECTSAITKAQVAIKTAHRNLKKSEDSVLRTEKEIGDNEKEIKDLTEEL 959
Query: 704 AKLVDQAAD-LN-IQQFKYAI-----EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 756
L D+A + LN +Q + A+ E +NLL E+ + + E ++ KI +++
Sbjct: 960 TTLEDKATEVLNDCRQAEEALPAVQEEHRNLLQEMRAIQDDEHELRKEALNIKFKIEQID 1019
Query: 757 FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 816
++ H Q+ + Y +KE+ H + K E + ++ E E E ++ P I
Sbjct: 1020 SHISTH-----QSKIKY--WQKEISKLSLHPIEDK-PPEELPVLSQE-ELEAIKDPDIIT 1070
Query: 817 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEAD----KKELKRFLAEID 872
A ++ + N + EY R+ E+L K+ A+ E RF +
Sbjct: 1071 NQIALLEAQCHEMKP----NLGAIAEY----RRKEELYLKRVAELDDITNERDRFRQAFE 1122
Query: 873 ALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSG 930
L+++ L I N+Q + + G+ L+ +S D F GI+ V+ +
Sbjct: 1123 DLRKQRLNEFMAGFNVITNKLKENYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKS 1181
Query: 931 QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
++ + SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1182 WKKIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1223
Score = 106 (42.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 41/188 (21%), Positives = 87/188 (46%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI------NLRKR------KLESIEKE 696
+++E E L+ ++ + I + +E + +E +NHI +L+KR + E+I+KE
Sbjct: 286 KMVEKEKDALEGDKNKAIEFLSLENKMFKE-KNHICQYYIYDLQKRINDLETQKENIQKE 344
Query: 697 D-DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL 755
DIN +KL D+ + +I + V I K + + + ++ K++
Sbjct: 345 TKDINEKSSKLADEMKSKSKALKDLEKKIDKITVLIEENKNKFTQLDLQDVKVREKLKHA 404
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 815
+ K+ EK + E+ K K++SDA + E + + E++ ++ +++
Sbjct: 405 KSKAKKLEKQLQKDKEKVEELKNVPSSSEKNISDATSKKELLEKAKDKEEEKLKQVMSSL 464
Query: 816 EELEAAIQ 823
+E IQ
Sbjct: 465 QEETREIQ 472
Score = 105 (42.0 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 53/215 (24%), Positives = 91/215 (42%)
Query: 44 RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--------- 94
R + +IGPNGSGKS+++ A+ G Q + R+ + + EE I+
Sbjct: 104 RFSCIIGPNGSGKSNVIDAMLFVFGYRAQKI-RSKKLSVLIHNSEEHTDIQSCSVEVHFQ 162
Query: 95 --ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQ 148
I GD E + + R N S + NGK +V + + I +++
Sbjct: 163 KIIDKEGDDYEVIPNSNFCVSRTAYRDNSSVYHINGKKSTFKDVGILLRSHGIDLDHNRF 222
Query: 149 FLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL-KTIECTVKRNGDTL 207
+ Q V + A + P E E + + + L L + +E ++ G+ L
Sbjct: 223 LILQGEVEQIAMMKPKGQTEHDEGMLEYLEDLIGSARLRAPIQTLCRRVETLNEQRGEKL 282
Query: 208 NQLKALNVEQEKD-VERVRQRA-ELLEKVESMKKK 240
N++K VE+EKD +E + +A E L M K+
Sbjct: 283 NRVKM--VEKEKDALEGDKNKAIEFLSLENKMFKE 315
Score = 91 (37.1 bits), Expect = 8.5e-07, Sum P(4) = 8.5e-07
Identities = 50/230 (21%), Positives = 99/230 (43%)
Query: 660 KEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQAADLNIQQF 718
KE E + +K K++E+E +N K+ E + E+ + + + +L + D N ++
Sbjct: 837 KELEANVTAAAPDKNKQKELEKVLNSYKKDYERVSEQAGKMESEVKRLHNLIIDFNNRKL 896
Query: 719 KYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 777
K + + + EI C + + +A I+ NLK+ E L+ D +
Sbjct: 897 KTQQDKVDKINQEIDECTSAITKAQVA-------IKTAHRNLKKSEDSVLRTEKEIGDNE 949
Query: 778 KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ 837
KE++ + L+ + +A + + E+ +P EE +Q+ + + L +
Sbjct: 950 KEIKDLTEELTTLEDKATEVLNDCRQAEEA---LPAVQEEHRNLLQEMRAIQDDEHELRK 1006
Query: 838 NILQEYEHRQRQIED-LSTKQEADK---KELKRF-LAEIDALKEKWLPTL 882
L + + QI+ +ST Q K KE+ + L I+ + LP L
Sbjct: 1007 EALN-IKFKIEQIDSHISTHQSKIKYWQKEISKLSLHPIEDKPPEELPVL 1055
Score = 88 (36.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 67/332 (20%), Positives = 142/332 (42%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQ 709
+E + +QKE ++I K ++ + + + + L+ +EK+ D I + + ++
Sbjct: 334 LETQKENIQKETKDI-------NEKSSKLADEMKSKSKALKDLEKKIDKITVLIEENKNK 386
Query: 710 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 769
L++Q K ++K+ + + +K +E +++ + + +++ A
Sbjct: 387 FTQLDLQDVKVREKLKHAKSKAKKLE-KQLQKDKEKVE---ELKNVPSSSEKNISDATSK 442
Query: 770 SLHYEDCK-KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ 828
E K KE E ++ +S + + I EKE +E T+ + + + +++Q
Sbjct: 443 KELLEKAKDKEEEKLKQVMSSLQEETREIQKEKEGKEKELMEFCKTVNDARSKM--DVAQ 500
Query: 829 ANSIFFL---NQNILQEYEHRQRQI---EDLSTKQEADKK-ELKRFLAEIDALKEKWLPT 881
A +L N + Q E ++ + E L ++ A K ++K AE + LKEK
Sbjct: 501 AELDIYLTRYNTAVSQLDEAKEALMTTSETLKQRKAAIKDIDIKLPTAEQE-LKEKENKL 559
Query: 882 LRNLVAQIN-ETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQ 940
+ ++N + RN ++ + SL +H S L++ K +SG + S H
Sbjct: 560 EKLKKEELNAQDLVRNLRQKVEEAKSSLAQHRSRGKVLEALLEQK--RSGSI---SGIHG 614
Query: 941 SGGERSVSTILYLVSLQD-LTNCPFRVVDEIN 971
G+ Y V++ + VVD I+
Sbjct: 615 RLGDLGAIDEKYDVAISSSCAALDYIVVDTID 646
Score = 85 (35.0 bits), Expect = 3.2e-06, Sum P(4) = 3.2e-06
Identities = 51/226 (22%), Positives = 89/226 (39%)
Query: 778 KEVEHCRKHLS-DAKR--QAESIAFITPE----LEKEFLEMPTTIEELEAAIQD----NI 826
+EV L D++R Q E F E L+K EM T+E+ A+IQ I
Sbjct: 771 EEVNRLESELQRDSQRAVQCEEEKFQLEEDITKLQKNVREMRNTLEKYTASIQSFSEQEI 830
Query: 827 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLV 886
+ L N+ + +Q ++L + KK+ +R ++E E + L NL+
Sbjct: 831 RLKGQVKELEANVTAAAPDKNKQ-KELEKVLNSYKKDYER-VSEQAGKMESEVKRLHNLI 888
Query: 887 AQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLE--VLSAHHQSG-G 943
N + Q+ +DE S K + IK R + E VL + G
Sbjct: 889 IDFNNRKLKTQQDKVDKINQEIDECTSAITKAQVAIKTAHRNLKKSEDSVLRTEKEIGDN 948
Query: 944 ERSVSTILY-LVSLQDLTNCPFRVVDEINQGMDPINE--RKMFQQL 986
E+ + + L +L+D + + + + E R + Q++
Sbjct: 949 EKEIKDLTEELTTLEDKATEVLNDCRQAEEALPAVQEEHRNLLQEM 994
Score = 81 (33.6 bits), Expect = 7.9e-06, Sum P(4) = 7.9e-06
Identities = 25/141 (17%), Positives = 63/141 (44%)
Query: 751 KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 810
++ LE L++ + A+Q ++++ +K++ + + E ++ +
Sbjct: 772 EVNRLESELQRDSQRAVQCEEEKFQLEEDITKLQKNVREMRNTLEKYTASIQSFSEQEIR 831
Query: 811 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 870
+ ++ELEA + N L + +L Y+ ++ + + K E++ K L + +
Sbjct: 832 LKGQVKELEANVTAAAPDKNKQKEL-EKVLNSYKKDYERVSEQAGKMESEVKRLHNLIID 890
Query: 871 IDALKEKWLPTLRNLVAQINE 891
+ K L T ++ V +IN+
Sbjct: 891 FNNRK---LKTQQDKVDKINQ 908
Score = 72 (30.4 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 43/204 (21%), Positives = 81/204 (39%)
Query: 272 NTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS--KRRMDFLEKVDXXXXXXXXKYKX 329
NTL +++ I+ +++ L G K+L + + + K + LEKV YK
Sbjct: 813 NTLEKYTASIQSFSEQEIRLKGQVKELEANVTAAAPDKNKQKELEKV-------LNSYKK 865
Query: 330 XXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKI----EKLGSQIL--ELGV 383
+K R + + + DKI ++ S I ++ +
Sbjct: 866 DYERVSEQAGKMESEVK-RLHNLIIDFNNRKLKTQQDKVDKINQEIDECTSAITKAQVAI 924
Query: 384 QANQKRLQKSEK-----EKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA------ 432
+ + L+KSE EK + N+ ++ ++ L +EDK ++L+ R +
Sbjct: 925 KTAHRNLKKSEDSVLRTEKEIGDNEKEIKDLTEELTTLEDKATEVLNDCRQAEEALPAVQ 984
Query: 433 ---ENIFEAYCWLQQHRHELNKEA 453
N+ + +Q HEL KEA
Sbjct: 985 EEHRNLLQEMRAIQDDEHELRKEA 1008
Score = 71 (30.1 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 166 LLEETEKAVGDPQLPVQHCALVEK----SSKLKTIECTVKRNGDTLNQLKALNVEQEKDV 221
L+EE + QL +Q + EK SK K +E ++++ + + +LK + EK++
Sbjct: 379 LIEENKNKF--TQLDLQDVKVREKLKHAKSKAKKLEKQLQKDKEKVEELKNVPSSSEKNI 436
Query: 222 ERVRQRAELLEKVESMKKK 240
+ ELLEK + +++
Sbjct: 437 SDATSKKELLEKAKDKEEE 455
Score = 66 (28.3 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 49/197 (24%), Positives = 93/197 (47%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 706
E R I+D+ +L+KE +NI K K ++++HI+ + K++ +KE +L +
Sbjct: 993 EMRAIQDDEHELRKEA---LNI----KFKIEQIDSHISTHQSKIKYWQKEIS-KLSLHPI 1044
Query: 707 VDQAAD-LNI--QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
D+ + L + Q+ AI+ +++ ++ A+ H A I E ++ E
Sbjct: 1045 EDKPPEELPVLSQEELEAIKDPDIITNQIALL--EAQCHEMKPNLGA-IAEY----RRKE 1097
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQA--ESIA-F--ITPELEKEFLEMPTTIEEL 818
+L L+ +D E + R+ D ++Q E +A F IT +L KE +M T +
Sbjct: 1098 ELYLKRVAELDDITNERDRFRQAFEDLRKQRLNEFMAGFNVITNKL-KENYQMLTLGGDA 1156
Query: 819 EAAIQDNISQ-ANSIFF 834
E + D++ + I F
Sbjct: 1157 ELELVDSLDPFSEGIMF 1173
Score = 65 (27.9 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 47/236 (19%), Positives = 100/236 (42%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTALAKL 706
QR ++ E K Q E E+I + + + R +E + +++ + I + + A +
Sbjct: 785 QRAVQCEEEKFQLE-EDITKLQKNVREMRNTLEKYTASIQSFSEQEIRLKGQVKELEANV 843
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAK-IREL--EFN---LK 760
A D N Q+ E++ +L + + +E + K + L +FN LK
Sbjct: 844 TAAAPDKNKQK-----ELEKVLNSYKK-DYERVSEQAGKMESEVKRLHNLIIDFNNRKLK 897
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDA----KRQAESIAFITPEL---EKEFLEMP- 812
+ + + ++C + + + A K+ +S+ E+ EKE ++
Sbjct: 898 TQQDKVDKINQEIDECTSAITKAQVAIKTAHRNLKKSEDSVLRTEKEIGDNEKEIKDLTE 957
Query: 813 --TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
TT+E+ + ++ QA +QE EHR ++++ Q+ D+ EL++
Sbjct: 958 ELTTLEDKATEVLNDCRQAEEAL----PAVQE-EHRNL-LQEMRAIQD-DEHELRK 1006
Score = 62 (26.9 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 19/82 (23%), Positives = 41/82 (50%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
K + E + D ++ + AL + K+ I ++ N + QL +V+ + ++
Sbjct: 346 KDINEKSSKLAD-EMKSKSKALKDLEKKIDKITVLIEENKNKFTQLDLQDVKVREKLKHA 404
Query: 225 RQRAELLEK-VESMKKKLPWLK 245
+ +A+ LEK ++ K+K+ LK
Sbjct: 405 KSKAKKLEKQLQKDKEKVEELK 426
Score = 61 (26.5 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 31/158 (19%), Positives = 69/158 (43%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITK-RFNIQV 143
K E+ + SL+ +T+E I ++ + + K F V +++ + +I +
Sbjct: 452 KEEEKLKQVMSSLQEETRE----IQKEKEGKEKELMEFCKTVNDARSKMDVAQAELDIYL 507
Query: 144 NNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDP--QLPVQHCALVEKSSKLKTIECTVK 201
+ Q + A ++ + L++ + A+ D +LP L EK +KL+ ++
Sbjct: 508 TRYNTAVSQLDEAKEALMTTSETLKQRKAAIKDIDIKLPTAEQELKEKENKLEKLKKEEL 567
Query: 202 RNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
D + L+ E + + + R R ++LE + K+
Sbjct: 568 NAQDLVRNLRQKVEEAKSSLAQHRSRGKVLEALLEQKR 605
Score = 59 (25.8 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 387 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHR 446
+K+LQK +KEK+ + K + D K +LL ++ E + + LQ+
Sbjct: 412 EKQLQK-DKEKV-EELKNVPSSSEKNISDATSKK-ELLEKAKDKEEEKLKQVMSSLQEET 468
Query: 447 HELNKEAYG 455
E+ KE G
Sbjct: 469 REIQKEKEG 477
Score = 47 (21.6 bits), Expect = 2.2e-10, Sum P(4) = 2.2e-10
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 383 VQANQKRLQKSEKEKILNQNKLT--LRQCSDRLKDMEDKNNKL 423
++ ++ +QK K+ +KL ++ S LKD+E K +K+
Sbjct: 334 LETQKENIQKETKDINEKSSKLADEMKSKSKALKDLEKKIDKI 376
Score = 45 (20.9 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREME 680
EQ L E E KL+K ++E +N + + R+++E
Sbjct: 549 EQELKEKEN-KLEKLKKEELNAQDLVRNLRQKVE 581
Score = 44 (20.5 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 24/100 (24%), Positives = 42/100 (42%)
Query: 226 QRAELLEKVESMKKKLPWLKYDMKKA-EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGK 284
QR E L +V+ ++K+ L+ D KA E++ +++ K I
Sbjct: 277 QRGEKLNRVKMVEKEKDALEGDKNKAIEFLSLENKMFKEKNHICQYY--IYDLQKRINDL 334
Query: 285 KQEKAILDGDCK----KLSSLINE---NSKRRMDFLEKVD 317
+ +K + + K K S L +E SK D +K+D
Sbjct: 335 ETQKENIQKETKDINEKSSKLADEMKSKSKALKDLEKKID 374
Score = 38 (18.4 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 379 LELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENI 435
LE +Q + +R + E+EK + +T Q +++M + K ++++ + I
Sbjct: 776 LESELQRDSQRAVQCEEEKFQLEEDITKLQ--KNVREMRNTLEKYTASIQSFSEQEI 830
>ZFIN|ZDB-GENE-090506-9 [details] [associations]
symbol:smc1a "structural maintenance of chromosomes
1A" species:7955 "Danio rerio" [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-090506-9 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 CTD:8243 KO:K06636 GeneTree:ENSGT00580000081569
EMBL:CR354431 IPI:IPI00506664 RefSeq:NP_001155103.1
UniGene:Dr.120420 Ensembl:ENSDART00000078148 GeneID:559665
KEGG:dre:559665 OMA:ERIRHAN NextBio:20883076 Uniprot:E7F0X6
Length = 1232
Score = 132 (51.5 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 82/383 (21%), Positives = 163/383 (42%)
Query: 652 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 703
E+E +L+KE + I+ Q++ K + + + +N + R++E I K+ N L
Sbjct: 846 ENEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKGEVNDKNREMEEIRKKLGSANKEL 905
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
+L + + + + + NLL +CK + + S D I + E + +
Sbjct: 906 TQLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLKSGTMD-DISQGEGGSQVED 961
Query: 764 KLA---LQASLHYEDCKKEVEHCR--KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
++ +S+H ++ E+++ + L DA + E I L++ E + ++ +
Sbjct: 962 AISSPKASSSVHAKEALIEIDYSNLNEDLKDALSEDE-IKGEMNTLQQRLNEQQSILQRI 1020
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
A + + S+ Q E+E +++ + E KKE RF D +
Sbjct: 1021 SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNACF 1074
Query: 879 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLSA 937
N + +I + SRN A G + +E D + + K FR L
Sbjct: 1075 ESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL----- 1128
Query: 938 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQ 997
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N Q
Sbjct: 1129 ---SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKDQSVQNF-Q 1183
Query: 998 CFLLTPKLLPDLEYSEACSILNI 1020
+++ L + Y++A S++ +
Sbjct: 1184 AIVIS---LKEEFYTKADSLIGV 1203
Score = 112 (44.5 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 47/158 (29%), Positives = 71/158 (44%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P + +IGPNGSGKS+L+ AI+ L T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNL-RVKTLKDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + D EE T R I + SE+ N KVV + E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYCEDNGEE-CTFTRAI-IGSSSEYRINSKVVGLSDYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKA 173
I + + Q V A +P + L EE ++
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS 161
Score = 98 (39.6 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 58/273 (21%), Positives = 124/273 (45%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQA 710
E + AK +KE E + ++ K + H+ L+ KL E+E + +N L++ ++
Sbjct: 195 ERKEAKQEKEEAE-----RYQRLKDEVVRAHVQLQLFKLYHNEEEIEKLNRELSQR-NRE 248
Query: 711 ADLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 769
D + ++ + E +K+ E+ + ++E + K ++ E N K+ + + +
Sbjct: 249 IDKDRKKMDHVEEELKDKKKEL-----GRMMRDQQNVEKEIKEKDAELNQKRPQYIKAKE 303
Query: 770 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 829
+ ++ K EV RK L +A++ + EL++E + + +E E +++
Sbjct: 304 NTAHKIKKLEV--ARKSLQNAQKMYKKRKADIEELDREQGAVEMSRQEFEERMEEEAQSQ 361
Query: 830 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT- 881
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T
Sbjct: 362 GQDLTLEENQVKQY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKIETE 418
Query: 882 --LRNLVAQINETFSR--NFQEMAVAGEVSLDE 910
++ + +I E R ++ SLDE
Sbjct: 419 AKIKQKIREIEENQKRIEKLEDYIATSRQSLDE 451
Score = 90 (36.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 55/274 (20%), Positives = 121/274 (44%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E+E KL +E + + +++K +E + +K++L + + D N ++ ++ A
Sbjct: 232 EEEIEKLNRELSQRNREIDKDRKKMDHVEEELKDKKKELGRMMR-DQQNVE-KEIKEKDA 289
Query: 712 DLNIQQFKY-------AIEIKNLLV---EIVSCKWSYAEKHMASIE-FDAKIRELEFNLK 760
+LN ++ +Y A +IK L V + + + Y +K A IE D + +E + +
Sbjct: 290 ELNQKRPQYIKAKENTAHKIKKLEVARKSLQNAQKMY-KKRKADIEELDREQGAVEMSRQ 348
Query: 761 Q-HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
+ E++ +A +D E +++ + ++ A + ELEK + + L+
Sbjct: 349 EFEERMEEEAQSQGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLD 408
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 879
+ I I Q I +E E Q++IE L ++ L + L E+ +
Sbjct: 409 LEERKKIETEAKI---KQKI-REIEENQKRIEKLEDYIATSRQSLDEQRRMEEELTEE-V 463
Query: 880 PTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES 913
+ + +IN ++ +++ G+ +D E+
Sbjct: 464 ELAKRRIDEINMELNQVMEQL---GDARIDRQEN 494
Score = 73 (30.8 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 45/235 (19%), Positives = 108/235 (45%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREM-ENHINLRKRKLESIEKEDDINTALAKL-VD 708
+E+E L+ +++E+ +++ ++ +E+ E L +++ + I+ +++ + KL V
Sbjct: 259 VEEE---LKDKKKELGRMMRDQQNVEKEIKEKDAELNQKRPQYIKAKENTAHKIKKLEVA 315
Query: 709 QAADLNIQQF--KYAIEIKNLLVE---IVSCKWSYAEKHMASIEFDAKIRELEFN-LKQH 762
+ + N Q+ K +I+ L E + + + E+ + + LE N +KQ+
Sbjct: 316 RKSLQNAQKMYKKRKADIEELDREQGAVEMSRQEFEERMEEEAQSQGQDLTLEENQVKQY 375
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
+L +AS +E+E K D K + + E E++ +E I++ I
Sbjct: 376 HRLKEEASKRAATLAQELE---KFNRDQKADQDRLDL---E-ERKKIETEAKIKQKIREI 428
Query: 823 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
++N + + Q + ++R E+L+ + E K+ + E++ + E+
Sbjct: 429 EENQKRIEKLEDYIATSRQSLDEQRRMEEELTEEVELAKRRIDEINMELNQVMEQ 483
Score = 63 (27.2 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 178 QLPVQHCAL-VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE 232
Q +H +L +++ SKL E + G +N +K + +E+D+ ++R R L+E
Sbjct: 721 QTKTRHLSLNMQEKSKL---ESELANFGPRINDIKRIIQSRERDITQLRDRMNLVE 773
Score = 63 (27.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 141 IQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTV 200
I V N+ +F +++V +++ +L ET+K QL + L E K+ E TV
Sbjct: 784 IGVRNIREF-EEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVMMWEQTV 842
Query: 201 KRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K++ + + +LK K ++ + + L+ KK
Sbjct: 843 KKDENEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKK 881
Score = 44 (20.5 bits), Expect = 5.4e-10, Sum P(5) = 5.4e-10
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 370 KIE---KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 419
KIE K+ +I E ++ NQKR++K E + I T RQ D + ME++
Sbjct: 414 KIETEAKIKQKIRE--IEENQKRIEKLE-DYIA-----TSRQSLDEQRRMEEE 458
Score = 43 (20.2 bits), Expect = 5.4e-10, Sum P(5) = 5.4e-10
Identities = 21/90 (23%), Positives = 42/90 (46%)
Query: 168 EETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKA--LNVEQE---KDVE 222
EE EK + +L ++ + + K+ +E +K L ++ NVE+E KD E
Sbjct: 233 EEIEKL--NRELSQRNREIDKDRKKMDHVEEELKDKKKELGRMMRDQQNVEKEIKEKDAE 290
Query: 223 RVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
++R + ++ E+ K+ L+ K +
Sbjct: 291 LNQKRPQYIKAKENTAHKIKKLEVARKSLQ 320
Score = 41 (19.5 bits), Expect = 5.4e-10, Sum P(5) = 5.4e-10
Identities = 19/70 (27%), Positives = 32/70 (45%)
Query: 490 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
G D AK + +D ++ + E K ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLK-EKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 550 -ISQFGLDSS 558
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 41 (19.5 bits), Expect = 1.5e-09, Sum P(4) = 1.5e-09
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTL-RQCSDRL---KDMEDKNNKL 423
++IEKL ++ + + ++ R + E+ L K L R D+ K++++K+ +L
Sbjct: 233 EEIEKLNRELSQRNREIDKDRKKMDHVEEELKDKKKELGRMMRDQQNVEKEIKEKDAEL 291
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(5) = 1.1e-09
Identities = 9/51 (17%), Positives = 29/51 (56%)
Query: 203 NGDTLNQLKALNVEQEKDVERVRQRAELLEK-VESMKKKLPWLKYDMKKAE 252
N + + +L ++ +++++ R++ + +E+ ++ KK+L + D + E
Sbjct: 231 NEEEIEKLNRELSQRNREIDKDRKKMDHVEEELKDKKKELGRMMRDQQNVE 281
Score = 39 (18.8 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL---RNSGAENIF 436
E+GV + +++ E+EK+ QN++ + RL + E + +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFETQKTRLAIQLDYEKNQLKEDQE 833
Query: 437 EAYCWLQQHRHELNK 451
+ W Q + + N+
Sbjct: 834 KVMMWEQTVKKDENE 848
>WB|WBGene00004873 [details] [associations]
symbol:smc-3 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040002 "collagen and cuticulin-based cuticle
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IMP]
[GO:0007109 "cytokinesis, completion of separation" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0000794
"condensed nuclear chromosome" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0008278 "cohesin complex" evidence=IDA;IPI]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=NAS] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040010 GO:GO:0007059 GO:GO:0005819
GO:GO:0004674 GO:GO:0040011 GO:GO:0000790 GO:GO:0040035
GO:GO:0000794 GO:GO:0030261 GO:GO:0007109 GO:GO:0040002
GO:GO:0008278 EMBL:AL117202 eggNOG:COG1196 SUPFAM:SSF75553
HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF
GeneTree:ENSGT00580000081628 RefSeq:NP_001129842.1
ProteinModelPortal:B2FDA8 SMR:B2FDA8 STRING:B2FDA8 PaxDb:B2FDA8
EnsemblMetazoa:Y47D3A.26b.1 EnsemblMetazoa:Y47D3A.26b.2
GeneID:176559 KEGG:cel:CELE_Y47D3A.26 CTD:176559
WormBase:Y47D3A.26b InParanoid:B2FDA8 NextBio:893080
ArrayExpress:B2FDA8 Uniprot:B2FDA8
Length = 1261
Score = 135 (52.6 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 70/295 (23%), Positives = 126/295 (42%)
Query: 23 IIEIELHNFMTF-DHLICKPGS-RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I E+ + F ++ D+ S R N+V+G NGSGKS+ AI L + L +
Sbjct: 3 IKEVRITGFRSYKDNTNVSGFSPRSNVVVGRNGSGKSNFFHAIQFVLSDEYAHLKEEQRL 62
Query: 81 GA-YVKRGEESGYIKISLRGDTKEEHLT--------IMRKIDTRNKSEWFFNGKVVPKGE 131
G + G + + ++ + D E+ L I+R++ + K +++ + K+VP+ E
Sbjct: 63 GLLHESTGPKVAHARVEITFDNSEKRLMAFENSEVKIVRQVG-KKKDQYYIDNKMVPRAE 121
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP----VKLLEETEKA-VGDPQLPVQHCAL 186
V+ + + +N + Q ++ E A SP +KLL E V D + +
Sbjct: 122 VVNLMESAGFSRSNPYYIVKQGKINELAT-SPDAYKLKLLREVAGTRVYDERK--EESLK 178
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
+ K +K+KT K G LK ++ E+ + +E ++ + +K++ K+ + + Y
Sbjct: 179 ILKETKMKT----EKIQG----LLKYID-ERLQTLENEKEDLKEYQKLDKTKRSVEYTMY 229
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL 301
D E I N + + E A L D KKL SL
Sbjct: 230 DNTNKEAIKEKTKLDEQKVELNQKDNNV---KSQLNDVIAEMAKLKTDKKKLESL 281
Score = 127 (49.8 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 83/371 (22%), Positives = 155/371 (41%)
Query: 659 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQ 717
+K+ I+ +Q + K + ++ +I+ + +EK+ D K+ A + ++Q
Sbjct: 881 RKQLATAISELQDYETKEKALQINIDNVLEQQRDLEKQQADFQLQYDKIT--AKEDEVKQ 938
Query: 718 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEF-DAKIRELEFNLKQHEKLALQA-SLHYED 775
K +K L++ S K K+ S E D++ + +H KL + L Y
Sbjct: 939 -KREDSLKKLILSRYSIK---TRKNQFSYEISDSEEVGAKREPIEHRKLKISTFCLEYR- 993
Query: 776 CKKEVEHCRKHLSDAKRQAESIAF--ITP-ELEKEFLEMPTTIEELEAAIQDNISQANSI 832
K E H L A + + P ELEK+ LE + EL+ +N+
Sbjct: 994 AKLEKVHSNMRLLGALPTDTFSKWQNVKPRELEKKLLEC---VNELKK--YENV------ 1042
Query: 833 FFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DALKEKWLPTLRNLVAQINE 891
N+ L +Y Q E+L TK+ A++K+ + + E+ L+ + + Q+ +
Sbjct: 1043 ---NKKALDQYMTASSQKEEL-TKRMAEQKKSEDSIEELLKVLENRKYEAIDLTFKQVKK 1098
Query: 892 TFSRNFQEMAVAGEVSL--------DEHE--SDFDKF-GILIKVKF-RQSGQLEVLSAHH 939
F + F+++ G + D+ E + + + GI + V F G E
Sbjct: 1099 NFEQVFKQLVPHGRGKMQMRAREQRDDEEGINSVELYEGISVLVSFVSDDGDSETREMTQ 1158
Query: 940 QSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCF 999
SGG++S+ + + S+Q PF + DEI+ +D RK ++++ S
Sbjct: 1159 LSGGQKSLVALAIIFSIQKCDPAPFYLFDEIDAALDA-QHRKSVADMIQSLSDQAQFVTT 1217
Query: 1000 LLTPKLLPDLE 1010
P+LL E
Sbjct: 1218 TFRPELLATAE 1228
Score = 81 (33.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 52/252 (20%), Positives = 121/252 (48%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
++T+++ +E L++++E + Q E+ K +E + L K +++S+ +E NT
Sbjct: 271 LKTDKKKLESLGRGLREDKETL----QAEETKM--VEEKMTL-KLEIDSLNEE---NTR- 319
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE--KHMASIEFDAKI---RELEFN 758
+ Q A+ ++Q I KN E+ + K YA+ + + ++ D +I R E
Sbjct: 320 ERQGRQNAEHSLQGVGDEI-FKNE-EELDTIKPEYAKLLEEESRLKTDIRIDESRAKEIL 377
Query: 759 LKQHEKLALQASLHYED--CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 816
KQ ++ +S+ D + E+ ++D K + E+I ++E+E ++ I+
Sbjct: 378 AKQGQRSQF-SSVDDRDKFLRNEIRRISGLIADNKEREETIQKELADVEREDEKLNNEIQ 436
Query: 817 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
+ I +N + ++ + ++ QEY+ + + +++A + ++ +I A +
Sbjct: 437 SISRTIDENRYEMDTFAAKSTSLKQEYDAAYVAQQTAAREEKAIRDKIGNTEQDISAAND 496
Query: 877 KWLPTLRNLVAQ 888
+ LR +VA+
Sbjct: 497 Q----LRRIVAR 504
Score = 79 (32.9 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 38/218 (17%), Positives = 88/218 (40%)
Query: 670 QIEKRKRREMENHINLRKR--------KLESIEKEDDINTALAKLVDQAA-DLNIQQFKY 720
++ ++R++ N+ N R + + + K N + + +DQAA DL + F
Sbjct: 596 RVSAPRQRDLSNNSNARPMSDVIDYEVQYDKVFKSITANVIIVRTLDQAARDLRNEGFDV 655
Query: 721 A------IEIKNLLVE-IVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 773
+ K ++ + K S E H F ++ EL+ +L + EK+ + +
Sbjct: 656 VSVDGDQMSKKGVMTGGFIDKKRSKLELHTQKDRFTKELAELQKSLAEAEKMVRERTQEA 715
Query: 774 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 833
E + ++ + D R+ + + ++F + +T E + + + +
Sbjct: 716 EKIRNRMQQHENQIGDFHRKHRELTEAKNAISQQFYMVTSTKEPKKDQLLGIKNHLRELL 775
Query: 834 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 871
+N QE L++ +E K+L++ + E+
Sbjct: 776 AQKENFEQEIGSNMSS--QLTSDEEQTVKKLRKKVDEM 811
Score = 67 (28.6 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 62/302 (20%), Positives = 119/302 (39%)
Query: 657 KLQKEREEII-NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNI 715
+ KE E+ ++ + EK R + +R R + + D + +L + A +
Sbjct: 689 RFTKELAELQKSLAEAEKMVRERTQEAEKIRNRMQQHENQIGDFHRKHRELTE-AKNAIS 747
Query: 716 QQFKYAIEIKNLLVE-IVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYE 774
QQF K + ++ K H+ + + E E +L +
Sbjct: 748 QQFYMVTSTKEPKKDQLLGIK-----NHLRELLAQKENFEQEIGSNMSSQLTSDEEQTVK 802
Query: 775 DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE-MPTTIEELEAAIQDNISQANSIF 833
+K+V+ K L+ R+ + +E + + T E L A + D+IS
Sbjct: 803 KLRKKVDEMTKQLATVSRRRMDLMHRKNAIENLLTKKLYKTKESLTARV-DDISD----- 856
Query: 834 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID--ALKEKWLP-TLRNLVAQIN 890
N+ + E+ Q+ L T+ E+ +K+L ++E+ KEK L + N++ Q
Sbjct: 857 --NER-RHKLENANAQLTSLLTRMESTRKQLATAISELQDYETKEKALQINIDNVLEQQR 913
Query: 891 --ETFSRNFQ---EMAVAGEVSLDEHESDFDKFGILIK--VKFRQSGQLEVLSAHHQSGG 943
E +FQ + A E + + D K IL + +K R++ +S + G
Sbjct: 914 DLEKQQADFQLQYDKITAKEDEVKQKREDSLKKLILSRYSIKTRKNQFSYEISDSEEVGA 973
Query: 944 ER 945
+R
Sbjct: 974 KR 975
Score = 59 (25.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 50/250 (20%), Positives = 105/250 (42%)
Query: 649 RLIEDEAAKLQKEREEIINIV-QIEKRKRREMENHINLRKRKLESI--EKEDDINTALAK 705
+L DE ++K R+++ + Q+ RR M+ + RK +E++ +K +L
Sbjct: 792 QLTSDEEQTVKKLRKKVDEMTKQLATVSRRRMD--LMHRKNAIENLLTKKLYKTKESLTA 849
Query: 706 LVDQAADLNIQQFKYA---IEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN---- 758
VD +D N ++ K ++ +LL + S + A +++ K + L+ N
Sbjct: 850 RVDDISD-NERRHKLENANAQLTSLLTRMESTRKQLATAISELQDYETKEKALQINIDNV 908
Query: 759 LKQHEKLALQAS---LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 815
L+Q L Q + L Y+ + + ++ D+ ++ + + +F +
Sbjct: 909 LEQQRDLEKQQADFQLQYDKITAKEDEVKQKREDSLKKLILSRYSIKTRKNQFSYEISDS 968
Query: 816 EELEAAIQ--DNISQANSIFFLNQNILQEYEHRQRQI------EDLSTKQEADKKELKRF 867
EE+ A + ++ S F L E H ++ + S Q +EL++
Sbjct: 969 EEVGAKREPIEHRKLKISTFCLEYRAKLEKVHSNMRLLGALPTDTFSKWQNVKPRELEKK 1028
Query: 868 LAE-IDALKE 876
L E ++ LK+
Sbjct: 1029 LLECVNELKK 1038
Score = 45 (20.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
K+EK+ S + LG K + K K L +C + LK E+ N K L
Sbjct: 995 KLEKVHSNMRLLGALPTDT-FSKWQNVKPRELEKKLL-ECVNELKKYENVNKKAL 1047
Score = 38 (18.4 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 532 SARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADN 571
S L Q +DA + ++ + IG+ E D A N
Sbjct: 456 STSLKQEYDAAYVAQQTAAREEKAIRDKIGNTEQDISAAN 495
>UNIPROTKB|F1NYB2 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007052 "mitotic spindle organization" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0007052 GO:GO:0000785 GO:GO:0016363 GO:GO:0000922
GO:GO:0032876 GO:GO:0051276 GO:GO:0000800 SUPFAM:SSF75553
GO:GO:0030893 OMA:NKVLEHF GeneTree:ENSGT00580000081628
EMBL:AADN02030887 EMBL:AADN02030888 IPI:IPI00598955
Ensembl:ENSGALT00000013979 ArrayExpress:F1NYB2 Uniprot:F1NYB2
Length = 1219
Score = 134 (52.2 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 809 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 868
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 755
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 869 EAINKRVKDTLARSDDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 924
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 925 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 980
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 869
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 981 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1040
Query: 870 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 922
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1041 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERGSGSQSSVPSVDQFTGVGI 1100
Query: 923 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1101 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1158
Query: 983 FQQLV 987
++
Sbjct: 1159 VSDMI 1163
Score = 103 (41.3 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 52/241 (21%), Positives = 102/241 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLV-CAIALALGGDTQLLGRATS 79
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAAIQFVLSDEFSHLPPLKR 62
Query: 80 IGAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGE 131
+ A + G I + + D + L I +R++ K ++F + K+V K +
Sbjct: 63 L-ALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND 121
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
V+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESIS 178
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKA 251
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ +
Sbjct: 179 LMKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELN 234
Query: 252 E 252
E
Sbjct: 235 E 235
Score = 88 (36.0 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 60/265 (22%), Positives = 111/265 (41%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREME-----NHINLRKRKLESIE-KEDDINTA 702
+ IE+ L++E+EE+ + +K RR +E +N + KL+ + K +
Sbjct: 195 KYIEERLHTLEEEKEELAQYQKWDKM-RRALEYTIYNQELNETRAKLDELSAKRETSGEK 253
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+L D D + + +++ L +I + K EK S E +I KQ
Sbjct: 254 SRQLRDAQQDARDKMEEIERQVRELKTKISAMK---EEKEQLSAERQEQI-------KQR 303
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
KL L+A ++ E ++ L + ++ E I EL + + + E+ E I
Sbjct: 304 TKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGI 363
Query: 823 QD--NISQANSIFFLNQNILQEY---EHRQRQIE-DLSTKQEA--DKKE----LKRFLAE 870
+Q + + Q ++ E R + I+ +L + +A DKK + + L +
Sbjct: 364 ARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLED 423
Query: 871 IDALKEKWLPTLRNLVAQINETFSR 895
+A KEK L L +NE +R
Sbjct: 424 TEANKEKNLEQYSKLDQDLNEVKAR 448
Score = 84 (34.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 56/244 (22%), Positives = 104/244 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIE-KRK--RREMENHINLRKRKLESIEKE-DD 698
++T+ +++E +L ER+E I ++E K K + E+ + RKR L+ +K +
Sbjct: 278 LKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEK 337
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
I +L + N + K I L YA++ S +F +K E +
Sbjct: 338 IEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGS-QFTSK-EERDKW 395
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+K+ K QA D K+++ K L D + E +L+++ E+ +EEL
Sbjct: 396 IKKELKSLDQA---INDKKRQIAAIHKDLEDTEANKEKNLEQYSKLDQDLNEVKARVEEL 452
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQI-----EDLSTKQEADKKEL-KRFLAEID 872
+ + + +N L E+ ++Q EDL KQ+ + K L ID
Sbjct: 453 DRKYYE-VKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGID 511
Query: 873 ALKE 876
++ +
Sbjct: 512 SINK 515
Score = 73 (30.8 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 803 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 862
EL+K+ + + ELEA + +N+ + N ++N I + Q++ + T+Q K
Sbjct: 678 ELQKDVRKAEEELGELEAKLNENLRR-NIEKWINNEI----DQLMNQMQQIETQQRKFKA 732
Query: 863 ELKRFLAEIDALKEK 877
L+E+ LKEK
Sbjct: 733 SRDSILSEMKMLKEK 747
Score = 72 (30.4 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 69/361 (19%), Positives = 154/361 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 698
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 716 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 775
Query: 699 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 776 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 832
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 814
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 833 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 878
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
+ + + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 879 LARSDD-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 934
Query: 875 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 928
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 935 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 993
Query: 929 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 994 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1049
Query: 987 V 987
V
Sbjct: 1050 V 1050
Score = 62 (26.9 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 37/155 (23%), Positives = 63/155 (40%)
Query: 363 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 415
A + DK+E++ Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 260 AQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 319
Query: 416 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 471
++ +LL R E I E L + + N KE G L R Y
Sbjct: 320 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 377
Query: 472 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ G F +++ D+ ++ K LK D I
Sbjct: 378 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 407
Score = 56 (24.8 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE---KDVER 223
+EE E+ V + L + A+ E+ +L E + T +LKA +++ E +R
Sbjct: 268 MEEIERQVRE--LKTKISAMKEEKEQLSA-ERQEQIKQRTKLELKAKDLQDELAGNSEQR 324
Query: 224 VR---QRAELLEKVESMKKKL 241
R +R +LLEK+E +K+L
Sbjct: 325 KRLLKERQKLLEKIEEKQKEL 345
Score = 54 (24.1 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV-RQRAELLEKVESMKKK 240
L E +KL + + +G+ QL+ + +E + RQ EL K+ +MK++
Sbjct: 233 LNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEE 288
Score = 54 (24.1 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 20/132 (15%), Positives = 57/132 (43%)
Query: 186 LVEKSSKLKTIECTVKRNGDT-LNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
L+ + +++T + K + D+ L+++K L ++++ + + L+ +E+ +
Sbjct: 716 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 775
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXXXNT-LHEFSKPIEGKKQEKAILDGDCKKLSSLIN 303
+ +K N + + + E+ L+G ++ + +N
Sbjct: 776 RESLKAELGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLN 835
Query: 304 ENSKRRMDFLEK 315
EN ++R+D +E+
Sbjct: 836 ENLRKRLDQVEQ 847
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK 219
K+S +K EE E+ + Q ++ +E K K ++ + N + Q K L E++K
Sbjct: 281 KISAMK--EEKEQLSAERQEQIKQRTKLEL--KAKDLQDELAGNSE---QRKRLLKERQK 333
Query: 220 DVERVRQRA-ELLE---KVESMKKK 240
+E++ ++ EL E K S+K+K
Sbjct: 334 LLEKIEEKQKELAETEPKFNSVKEK 358
Score = 47 (21.6 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 28/145 (19%), Positives = 66/145 (45%)
Query: 387 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHR 446
Q+R K+ ++ IL++ K+ LK+ ++ K + S +++ + ++ R
Sbjct: 726 QQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMPKQRS-LQSLEASLHAMESTR 776
Query: 447 HELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDV-- 504
L E +L ++++ ++ + L D + + Q+ +R L + +K +
Sbjct: 777 ESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQQE--NRQLLNERIKLEGIIT 828
Query: 505 PILNYVSNESSRKEPFQISEEMRAL 529
+ Y+ NE+ RK Q+ +E+ L
Sbjct: 829 RVETYL-NENLRKRLDQVEQELNEL 852
>ASPGD|ASPL0000004872 [details] [associations]
symbol:smcB species:162425 "Emericella nidulans"
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000796 "condensin
complex" evidence=IEA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005694 GO:GO:0006281
EMBL:BN001301 GO:GO:0006310 GO:GO:0030261 EMBL:AACD01000101
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 HOGENOM:HOG000163792 OMA:CQNGKIP
OrthoDB:EOG4P2T9B RefSeq:XP_663503.1 ProteinModelPortal:Q5B0N1
STRING:Q5B0N1 EnsemblFungi:CADANIAT00007134 GeneID:2870708
KEGG:ani:AN5899.2 Uniprot:Q5B0N1
Length = 1179
Score = 132 (51.5 bits), Expect = 4.6e-11, Sum P(3) = 4.6e-11
Identities = 75/349 (21%), Positives = 151/349 (43%)
Query: 656 AKLQKEREEIINIVQIEKRKR-REMEN-HINLRKRKLESIEKEDDINTALAKLVDQAADL 713
+KL+ E + +N ++ K ++N H L+ +LES + D++ A + + + L
Sbjct: 791 SKLE-ELQTTLNALKKSLSKNLTSVKNLHKELQASRLESEQVGSDLSAAEEQYAESESTL 849
Query: 714 NIQQFKYAIEIKNLLVEIVSCKWSY--AEKHM----ASIE-FDAKIRELEFNLKQHEKLA 766
Q E+ +L E K ++ A+ H+ A + FD ++R+LE ++
Sbjct: 850 KAQ----LEEVDSLKREQARIKDAHDIAQAHLDDERAKLTGFDDELRDLEQTMQSKNSQI 905
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELE-----KEFLEMPTTIEELEAA 821
+ L + ++E +K +A QA +A + E E K+ P T+ + +
Sbjct: 906 TEEGLEMQKLGHQLEKLQKE-QNAAEQA--VAHLEAEHEWIADEKDNFGRPNTVYDFK-- 960
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIED--LSTKQEADKKE--LKRFLAEIDALKEK 877
NI++ + +N+ + ++ +++I ++ +KKE LK + + K K
Sbjct: 961 -NQNIAECKATL---RNVTERFQGMKKKINPKVMNMIDSVEKKEAALKNMMRTVIRDKSK 1016
Query: 878 WLPTLRNLV-----------AQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKF 926
T+ NL ++N F + F E+ LD E G+ +KV
Sbjct: 1017 IEETIINLNEYKKEALHKTWTKVNADFGQIFSELLPGSFAKLDPPEGKDITDGLEVKVSL 1076
Query: 927 RQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
G++ S SGG+RS+ + +++L P ++DE++ +D
Sbjct: 1077 ---GKVWKQSLTELSGGQRSLIALSLIMALLQFKPAPMYILDEVDAALD 1122
Score = 114 (45.2 bits), Expect = 4.6e-11, Sum P(3) = 4.6e-11
Identities = 51/195 (26%), Positives = 89/195 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYV-KRGEESGYIKISL-----RG 99
N + G NGSGKS+++ AI LG RA ++ + KRG+ +G K S+
Sbjct: 28 NSITGLNGSGKSNILDAICFVLGITNMSTVRAQNLQDLIYKRGQ-AGVTKASVTIVFDNR 86
Query: 100 DTK------EEHLTIM--RKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLP 151
DT EE+ TI R+I S++ NG + V + + + +NN +
Sbjct: 87 DTAKSPIGFEEYATISVTRQIVLGGTSKYLINGHRAQQQTVQNLFQSVQLNINNPNFLIM 146
Query: 152 QDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
Q R+ + + V++L E+A G + EK++K T+ + L +++
Sbjct: 147 QGRITKVLNMKAVEILSMIEEAAGTRMFEDRR----EKAAK------TMAKKDLKLQEIE 196
Query: 212 ALNVEQ-EKDVERVR 225
L E+ E +E++R
Sbjct: 197 GLLKEEIEPKLEKLR 211
Score = 93 (37.8 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 44/215 (20%), Positives = 94/215 (43%)
Query: 670 QIEKRKRREMENHINLRKRKLESIEKEDDINTALA---KLVDQAADLNI--QQFK-YAIE 723
+ EK+KR+ N K K E E+D+ A K + + + K ++ E
Sbjct: 252 ECEKKKRKIQALEDNTAKLKSEIAHMEEDVKRVKAVRDKELRKGGKFQALEDEVKAHSHE 311
Query: 724 IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHC 783
+ L K S AE+ S E +++LE +LK+ +K+ + Y+ K E++
Sbjct: 312 LVRLTTVFDLKKASIAEEKEKSKELQKSVKDLETSLKEKKKIYDKLQAEYDAAKAELD-- 369
Query: 784 RKHLSDAKRQAESIAFI-TPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 842
++ +++ E + + T KE E + +QD ++A++ + +
Sbjct: 370 -AQTAEVEQKEELLQTLQTGVASKEGQE-----SGYQGQLQDARNRASNAATEQEQAKLK 423
Query: 843 YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
H +++I++ + + K++ L E++ LK +
Sbjct: 424 IAHLEKRIKEEEPRAKKAKEQNSGLLKELEGLKSQ 458
Score = 91 (37.1 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 41/145 (28%), Positives = 75/145 (51%)
Query: 747 EFDAKIRELEFNLKQHEKLALQASLH-YEDCKKEVEHCRKHLSDAK-RQAESIAFITPEL 804
E D K E++ +Q + + + E+ K +E ++++SDAK RQ+E+ I +
Sbjct: 720 ELDLKNHEIKLTEEQIGGNSSSSIIQAVEEMKANIEQLKQNISDAKLRQSEASKDIK-RI 778
Query: 805 EKEFLEM----PTTIEELEA---AIQDNISQ-ANSIFFLNQNILQEYEHRQRQI-EDLST 855
EK+ E + +EEL+ A++ ++S+ S+ L++ LQ Q+ DLS
Sbjct: 779 EKDMREFNNNKDSKLEELQTTLNALKKSLSKNLTSVKNLHKE-LQASRLESEQVGSDLSA 837
Query: 856 KQE--ADKKE-LKRFLAEIDALKEK 877
+E A+ + LK L E+D+LK +
Sbjct: 838 AEEQYAESESTLKAQLEEVDSLKRE 862
Score = 71 (30.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 56/278 (20%), Positives = 120/278 (43%)
Query: 651 IEDEAAKLQKE----REEIINIVQIEKRKRRE------MENHINLRKRKLESIEKEDDIN 700
+ED AKL+ E E++ + + ++ R+ +E+ + +L + D+
Sbjct: 263 LEDNTAKLKSEIAHMEEDVKRVKAVRDKELRKGGKFQALEDEVKAHSHELVRLTTVFDLK 322
Query: 701 TA-LAKLVDQAADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
A +A+ +++ +L +++ + +++ K + + + AE A E DA+ E+E
Sbjct: 323 KASIAEEKEKSKELQKSVKDLETSLKEKKKIYDKLQ-----AEYDAAKAELDAQTAEVE- 376
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHC--RKHLSDAKRQAESIAFITPELEKEFLEMPTTI 815
Q E+L LQ +L KE + + L DA+ +A + A + + + + I
Sbjct: 377 ---QKEEL-LQ-TLQTGVASKEGQESGYQGQLQDARNRASNAATEQEQAKLKIAHLEKRI 431
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLST---KQEADKKELKRFLAEID 872
+E E + Q + + + + + + + ++ L ++E +E EI
Sbjct: 432 KEEEPRAKKAKEQNSGLLKELEGLKSQAKKLEYELSKLGFEPGREEQLYQEQSGLQKEIR 491
Query: 873 ALKEKWLPTLRNLVAQINETFSR---NFQEMAVAGEVS 907
L+++ L+ VA I +S NF V G V+
Sbjct: 492 ELRQR-ADGLQRKVANIEFNYSDPYPNFDRSKVKGLVA 528
Score = 55 (24.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
+ K K + +E VK + L +L + ++++ E + EL + V+ ++ L K
Sbjct: 292 LRKGGKFQALEDEVKAHSHELVRLTTVFDLKKASIAEEKEKSKELQKSVKDLETSLKEKK 351
Query: 246 --YDMKKAEY 253
YD +AEY
Sbjct: 352 KIYDKLQAEY 361
Score = 50 (22.7 bits), Expect = 4.6e-11, Sum P(3) = 4.6e-11
Identities = 10/40 (25%), Positives = 23/40 (57%)
Query: 211 KALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKK 250
K + E+ + + Q + LL+++E +K + L+Y++ K
Sbjct: 429 KRIKEEEPRAKKAKEQNSGLLKELEGLKSQAKKLEYELSK 468
Score = 46 (21.3 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVES-MKKKLPWLKYDMKKAEY 253
Q K EK ++ RA+ ++ S + K+L LK KK EY
Sbjct: 419 QAKLKIAHLEKRIKEEEPRAKKAKEQNSGLLKELEGLKSQAKKLEY 464
>UNIPROTKB|E1C611 [details] [associations]
symbol:E1C611 "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0045132 "meiotic
chromosome segregation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051383 "kinetochore
organization" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00818627
Ensembl:ENSGALT00000037610 ArrayExpress:E1C611 Uniprot:E1C611
Length = 1192
Score = 127 (49.8 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 75/347 (21%), Positives = 145/347 (41%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESI---EKEDDINTALAKL 706
I++ KL +++ + + K K++E+E + L + K E ++ + A+A L
Sbjct: 795 IKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 854
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 766
+Q + L + K +KN E+ S K AE+ AKI + H
Sbjct: 855 KEQVSALEAEAVKTRESLKNAENELSSEKGLMAERTKDIKAKSAKIEKYREQNNIHRNYF 914
Query: 767 LQASLHYEDCKKE---VEHCRKHLSDAKRQA-ESIAFITPELEKEF-LEMPT-TIEELEA 820
+ +E +K ++ K L + K A E F + +F P T ++L+
Sbjct: 915 KEGD-QWEKKQKHSDVMDKLDKLLKEYKWIASEKELFGQADTTYDFEANNPKETGQKLQK 973
Query: 821 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 880
+ S+ N+L E E +R+ DL K+ + + + LA I+ L K
Sbjct: 974 LLTKKEKLEKSLNMRAMNLLSEAE--ERKYNDLMKKKRIVENDKIKILATIEELDRKKNK 1031
Query: 881 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS-GQLEVLSAHH 939
L ++N+ F F + + L + K IL ++FR G + +
Sbjct: 1032 ALHIAWEKVNKDFGSIFSMLLPGAKAMLVPSK----KQNILDGLEFRVGLGDIWKENLTE 1087
Query: 940 QSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 986
SGG+RS++ + ++++ P ++DE++ +D + + + Q L
Sbjct: 1088 LSGGQRSLAALSLILAILLFKPAPIYILDEVDAALDLSHTQNIGQML 1134
Score = 118 (46.6 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 52/226 (23%), Positives = 104/226 (46%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISLRGDTKE 103
N + G NGSGKS+++ +I LG RA+S+ V + ++G K +S+ D +
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDLVYKNGQAGVNKATVSITFDNSD 87
Query: 104 -----------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFL-- 150
+ +TI R++ ++++ NG V ++ + VNN FL
Sbjct: 88 KKNSPLGFENNDEITITRQVIVGGRNKYLINGMNASNNRVQDLFGSVGLNVNN-PHFLIM 146
Query: 151 PQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
Q ++ + + P ++L E+A G + C K + KTIE + L+++
Sbjct: 147 QQGQITKVLNMKPTEILAMIEEAAGTR---MYECM---KITAHKTIE----KKESKLDEI 196
Query: 211 KALNVEQ-EKDVERVRQ-RAELLEKVESMKKKLPWLKYDMKKAEYI 254
+ + E+ +E++++ RA LE + M +++ L+ +Y+
Sbjct: 197 RRIITEEISPTLEKLKEARASYLE-YQKMTREVENLRRIYVAFQYV 241
Score = 81 (33.6 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 51/217 (23%), Positives = 93/217 (42%)
Query: 677 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 736
R+ E+ + ++ +LE+ EKE LA L + A Q K E+K+ E++ K
Sbjct: 686 RDAEDELKIKTSQLEATEKE------LANLKNMAE--KYQHLKQQWEMKSEEAELLQTKI 737
Query: 737 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCK-----------KEVEH 782
+ H + A I E E LK+ E+ +A Y+ + KE+++
Sbjct: 738 QQSAYHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKALENKMKNAEAERGKEIKN 797
Query: 783 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 842
++ L+ AK++A+ + +++++ E+ + ELE Q+ S Q I
Sbjct: 798 AQQKLNSAKKKADDSS---RKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 854
Query: 843 YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 879
E Q+ L + ++ LK AE + EK L
Sbjct: 855 KE----QVSALEAEAVKTRESLKN--AENELSSEKGL 885
Score = 66 (28.3 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
E + I T ++ D + +LK EQE + + +Q + L E ES++ K P+
Sbjct: 450 EDQEAFEAIRKTKEKLQDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKHPY 509
Query: 244 LKYDMKKAE 252
L+++ K E
Sbjct: 510 LRFEYKNPE 518
Score = 57 (25.1 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 152 QDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
Q + F LSPV L+ + A+ + C ++ KLK + +K + ++
Sbjct: 391 QKSLTHFMLLSPVSLVLRAKAAICHS---CKQC--LQAQMKLKYAQQELKTKQAEVKKMD 445
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
E ++ E +R+ E L+ + MKK LKY+ + E
Sbjct: 446 GSYKEDQEAFEAIRKTKEKLQ--DEMKK----LKYEEAEQE 480
Score = 52 (23.4 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 37/155 (23%), Positives = 67/155 (43%)
Query: 105 HLT-IMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLT---QFLPQ--DRVCEF 158
H+T I+ K+ T +E ++ K LE T++ + N+ Q L Q + E
Sbjct: 674 HVTPILSKLKTMRDAE----DELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEE 729
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQ 217
A+L K+ + + L ++ + E LK E + +R + + KAL N +
Sbjct: 730 AELLQTKIQQSAYHKQQEDLLALKK-TIAECEETLKKTEES-QRKAE--EEYKALENKMK 785
Query: 218 EKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ ER ++ +K+ S KKK MK+ +
Sbjct: 786 NAEAERGKEIKNAQQKLNSAKKKADDSSRKMKEKQ 820
Score = 51 (23.0 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 384 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
QAN+K++ +S E N+ K+ ++ + ++++ E KNN++
Sbjct: 258 QANKKKIFESMAE---NEKKV--KELAQQIEETEKKNNEV 292
Score = 46 (21.3 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
+++L+ +Q Q K ++E +L K T+ +C + LK E+ K
Sbjct: 730 AELLQTKIQ--QSAYHK-QQEDLLALKK-TIAECEETLKKTEESQRK 772
Score = 44 (20.5 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 652 EDEAA--KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE 694
ED+ A ++K +E++ + +++K K E E +L K+K S E
Sbjct: 450 EDQEAFEAIRKTKEKLQD--EMKKLKYEEAEQEAHLAKKKQLSSE 492
>RGD|62006 [details] [associations]
symbol:Smc3 "structural maintenance of chromosomes 3"
species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=ISO;ISS] [GO:0000800 "lateral element" evidence=ISO]
[GO:0000922 "spindle pole" evidence=ISO;ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006275 "regulation of DNA
replication" evidence=ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007052 "mitotic spindle organization"
evidence=ISO;ISS] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007067 "mitosis" evidence=IEA] [GO:0007126
"meiosis" evidence=ISO;ISS] [GO:0007165 "signal transduction"
evidence=ISO;ISS] [GO:0016363 "nuclear matrix" evidence=ISO;ISS]
[GO:0019827 "stem cell maintenance" evidence=ISO] [GO:0030893
"meiotic cohesin complex" evidence=ISO;ISS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0034991
"nuclear meiotic cohesin complex" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=ISO] [GO:0045502 "dynein
binding" evidence=ISO;ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:62006 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0051301 GO:GO:0007067 GO:GO:0007052
GO:GO:0006275 GO:GO:0006281 GO:GO:0000785 GO:GO:0016363
GO:GO:0005604 GO:GO:0000922 GO:GO:0051276 GO:GO:0045502
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
HOVERGEN:HBG039849 EMBL:U82626 IPI:IPI00201289 UniGene:Rn.11074
ProteinModelPortal:P97690 STRING:P97690 PhosphoSite:P97690
PRIDE:P97690 UCSC:RGD:62006 ArrayExpress:P97690
Genevestigator:P97690 GermOnline:ENSRNOG00000014173 Uniprot:P97690
Length = 1191
Score = 125 (49.1 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 84/365 (23%), Positives = 152/365 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q + R + +E KL+ + + RKR + +E +N LR+ + L + +
Sbjct: 807 LQQKNRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSQL 866
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 755
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 869
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 870 EIDALKEKWLPTLR-NLVAQINETF-SRNFQEMAVAGEVSLDEHESD----FDKF-GILI 922
+ +K +P + LV + + S++ E +GE D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGAKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 923 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 983 FQQLV 987
++
Sbjct: 1157 VSDMI 1161
Score = 111 (44.1 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 53/240 (22%), Positives = 102/240 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Score = 87 (35.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 60/265 (22%), Positives = 110/265 (41%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREME-----NHINLRKRKLESIE-KEDDINTA 702
+ IE+ L++E+EE+ + +K RR +E +N + KL+ + K +
Sbjct: 194 KYIEERLHTLEEEKEELAQYQKWDKM-RRALEYTIYNQELNETRAKLDELSAKRETSGEK 252
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+L D D + +++ L +I + K EK S E +I KQ
Sbjct: 253 SRQLRDAQQDARDKMEDIERQVRELKTKISAMK---EEKEQLSAERQEQI-------KQR 302
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
KL L+A ++ E ++ L + ++ E I EL + + + E+ E I
Sbjct: 303 TKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGI 362
Query: 823 QD--NISQANSIFFLNQNILQEY---EHRQRQIE-DLSTKQEA--DKKE----LKRFLAE 870
+Q + + Q ++ E R + I+ +L + +A DKK + + L +
Sbjct: 363 ARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLED 422
Query: 871 IDALKEKWLPTLRNLVAQINETFSR 895
+A KEK L L +NE +R
Sbjct: 423 TEANKEKNLEQYNKLDQDLNEVKAR 447
Score = 83 (34.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 56/244 (22%), Positives = 104/244 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIE-KRK--RREMENHINLRKRKLESIEKE-DD 698
++T+ +++E +L ER+E I ++E K K + E+ + RKR L+ +K +
Sbjct: 277 LKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEK 336
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
I +L + N + K I L YA++ S +F +K E +
Sbjct: 337 IEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGS-QFTSK-EERDKW 394
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+K+ K QA D K+++ K L D + E +L+++ E+ +EEL
Sbjct: 395 IKKELKSLDQA---INDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEEL 451
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQI-----EDLSTKQEADKKEL-KRFLAEID 872
+ + + +N L E+ ++Q EDL KQ+ + K L ID
Sbjct: 452 DRKYYE-VKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGID 510
Query: 873 ALKE 876
++ +
Sbjct: 511 SINK 514
Score = 72 (30.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 68/359 (18%), Positives = 151/359 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 698
+ + + IE + K + R+ ++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSTLSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 699 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLPSQLSLEDQK---RVDALNDEIRQLQQKNRQLLNERIKLEGIITRVET 830
Query: 758 NLKQHEKLAL-QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 816
L ++ + L Q + + E E L+ Q E+I + ++ +I+
Sbjct: 831 YLNENLRKRLDQVEQELNELR-ETEGGTV-LTATTSQLEAINKRVKDTMARSEDLDNSID 888
Query: 817 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
+ EA I++ + + + H +++E ++ +Q LK+ KE
Sbjct: 889 KTEAGIKELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGM---LLKK--------KE 937
Query: 877 KWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ----SGQ 931
+ + +R L + E F + +Q +++ L++ ++ K+ + K Q S Q
Sbjct: 938 ECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQ 996
Query: 932 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAA 990
E L Q +R +I+ L+++ +L + + + + N ++FQ+LV A
Sbjct: 997 KEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKLVPGA 1051
Score = 70 (29.7 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 803 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 862
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 863 ELKRFLAEIDALKEK 877
L+E+ LKEK
Sbjct: 731 SRDSTLSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 363 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 415
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 416 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 471
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 472 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 54 (24.1 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 205 DTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
D ++L A N EQ K + +++R +LLEK+E +K+L
Sbjct: 311 DLQDEL-AGNSEQRKRL--LKERQKLLEKIEEKQKEL 344
Score = 52 (23.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV-RQRAELLEKVESMKKK 240
L E +KL + + +G+ QL+ + +E + RQ EL K+ +MK++
Sbjct: 232 LNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEE 287
Score = 38 (18.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 861 KKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 900
+K++++ E+ L+ K LR + +IN + +M
Sbjct: 679 QKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQM 718
>UNIPROTKB|P97690 [details] [associations]
symbol:Smc3 "Structural maintenance of chromosomes protein
3" species:10116 "Rattus norvegicus" [GO:0051276 "chromosome
organization" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 RGD:62006
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0051301 GO:GO:0007067 GO:GO:0007052 GO:GO:0006275
GO:GO:0006281 GO:GO:0000785 GO:GO:0016363 GO:GO:0005604
GO:GO:0000922 GO:GO:0051276 GO:GO:0045502 eggNOG:COG1196
SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
HOVERGEN:HBG039849 EMBL:U82626 IPI:IPI00201289 UniGene:Rn.11074
ProteinModelPortal:P97690 STRING:P97690 PhosphoSite:P97690
PRIDE:P97690 UCSC:RGD:62006 ArrayExpress:P97690
Genevestigator:P97690 GermOnline:ENSRNOG00000014173 Uniprot:P97690
Length = 1191
Score = 125 (49.1 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 84/365 (23%), Positives = 152/365 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q + R + +E KL+ + + RKR + +E +N LR+ + L + +
Sbjct: 807 LQQKNRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSQL 866
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 755
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 869
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 870 EIDALKEKWLPTLR-NLVAQINETF-SRNFQEMAVAGEVSLDEHESD----FDKF-GILI 922
+ +K +P + LV + + S++ E +GE D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGAKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 923 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 983 FQQLV 987
++
Sbjct: 1157 VSDMI 1161
Score = 111 (44.1 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 53/240 (22%), Positives = 102/240 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Score = 87 (35.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 60/265 (22%), Positives = 110/265 (41%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREME-----NHINLRKRKLESIE-KEDDINTA 702
+ IE+ L++E+EE+ + +K RR +E +N + KL+ + K +
Sbjct: 194 KYIEERLHTLEEEKEELAQYQKWDKM-RRALEYTIYNQELNETRAKLDELSAKRETSGEK 252
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+L D D + +++ L +I + K EK S E +I KQ
Sbjct: 253 SRQLRDAQQDARDKMEDIERQVRELKTKISAMK---EEKEQLSAERQEQI-------KQR 302
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
KL L+A ++ E ++ L + ++ E I EL + + + E+ E I
Sbjct: 303 TKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERGI 362
Query: 823 QD--NISQANSIFFLNQNILQEY---EHRQRQIE-DLSTKQEA--DKKE----LKRFLAE 870
+Q + + Q ++ E R + I+ +L + +A DKK + + L +
Sbjct: 363 ARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLED 422
Query: 871 IDALKEKWLPTLRNLVAQINETFSR 895
+A KEK L L +NE +R
Sbjct: 423 TEANKEKNLEQYNKLDQDLNEVKAR 447
Score = 83 (34.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 56/244 (22%), Positives = 104/244 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIE-KRK--RREMENHINLRKRKLESIEKE-DD 698
++T+ +++E +L ER+E I ++E K K + E+ + RKR L+ +K +
Sbjct: 277 LKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEK 336
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
I +L + N + K I L YA++ S +F +K E +
Sbjct: 337 IEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGS-QFTSK-EERDKW 394
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+K+ K QA D K+++ K L D + E +L+++ E+ +EEL
Sbjct: 395 IKKELKSLDQA---INDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEEL 451
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQI-----EDLSTKQEADKKEL-KRFLAEID 872
+ + + +N L E+ ++Q EDL KQ+ + K L ID
Sbjct: 452 DRKYYE-VKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILNGID 510
Query: 873 ALKE 876
++ +
Sbjct: 511 SINK 514
Score = 72 (30.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 68/359 (18%), Positives = 151/359 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 698
+ + + IE + K + R+ ++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSTLSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 699 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLPSQLSLEDQK---RVDALNDEIRQLQQKNRQLLNERIKLEGIITRVET 830
Query: 758 NLKQHEKLAL-QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 816
L ++ + L Q + + E E L+ Q E+I + ++ +I+
Sbjct: 831 YLNENLRKRLDQVEQELNELR-ETEGGTV-LTATTSQLEAINKRVKDTMARSEDLDNSID 888
Query: 817 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
+ EA I++ + + + H +++E ++ +Q LK+ KE
Sbjct: 889 KTEAGIKELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGM---LLKK--------KE 937
Query: 877 KWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ----SGQ 931
+ + +R L + E F + +Q +++ L++ ++ K+ + K Q S Q
Sbjct: 938 ECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQ 996
Query: 932 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAA 990
E L Q +R +I+ L+++ +L + + + + N ++FQ+LV A
Sbjct: 997 KEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKLVPGA 1051
Score = 70 (29.7 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 803 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 862
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 863 ELKRFLAEIDALKEK 877
L+E+ LKEK
Sbjct: 731 SRDSTLSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 363 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 415
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 416 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 471
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 472 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 54 (24.1 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 205 DTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
D ++L A N EQ K + +++R +LLEK+E +K+L
Sbjct: 311 DLQDEL-AGNSEQRKRL--LKERQKLLEKIEEKQKEL 344
Score = 52 (23.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV-RQRAELLEKVESMKKK 240
L E +KL + + +G+ QL+ + +E + RQ EL K+ +MK++
Sbjct: 232 LNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEE 287
Score = 38 (18.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 861 KKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 900
+K++++ E+ L+ K LR + +IN + +M
Sbjct: 679 QKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQM 718
>POMBASE|SPBC29A10.04 [details] [associations]
symbol:psm1 "mitotic cohesin complex subunit Psm1"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC] [GO:0005694 "chromosome"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IMP] [GO:0008278 "cohesin complex"
evidence=IDA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0030892 "mitotic cohesin complex" evidence=NAS] [GO:0046982
"protein heterodimerization activity" evidence=IPI]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
PomBase:SPBC29A10.04 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR
GO:GO:0006310 GO:GO:0030261 GO:GO:0007064 eggNOG:COG1196
SUPFAM:SSF75553 GO:GO:0030892 HOGENOM:HOG000195481 PIR:T40059
RefSeq:NP_596049.2 IntAct:O94383 STRING:O94383 PRIDE:O94383
GeneID:2540557 OrthoDB:EOG42VCQD NextBio:20801683 Uniprot:O94383
Length = 1228
Score = 140 (54.3 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
Identities = 57/251 (22%), Positives = 111/251 (44%)
Query: 21 GNIIEIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
G ++ +E+ NF ++ H I P +IGPNG+GKS+L+ AI+ LG + L R+T+
Sbjct: 2 GRLLRLEVENFKSYRGHQIIGPFEDFTSIIGPNGAGKSNLMDAISFVLGVKSSHL-RSTN 60
Query: 80 IGAYVKRGE---------------ESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNG 124
+ + RG+ + Y+K+ D E+ R I +E+ +
Sbjct: 61 VKELIYRGKILQRDNTDFTDSSNPTTAYVKLMYELDNGEQR-EYKRAITPSGATEYKIDE 119
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHC 184
++V E ++ NI V + Q V A SP++L + E+ G + ++
Sbjct: 120 EIVTFSEYCGSLQKENILVRARNFLVFQGDVETIASQSPLELSKLVEQISGSLEYKSEYD 179
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVE----QEKDVERVRQRAELLEKVESMKKK 240
++ K V + + N+ + +N E QE+ E R +++ ++ +
Sbjct: 180 KSKDEQDK------AVNLSAHSFNKKRGINAELRQYQEQKTEAERYQSQKEKRDSAQLVY 233
Query: 241 LPWLKYDMKKA 251
L W + ++K+
Sbjct: 234 LLWKLFHLEKS 244
Score = 104 (41.7 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
Identities = 67/349 (19%), Positives = 153/349 (43%)
Query: 658 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKED--DINTALAKLVDQAADLNI 715
++K++E I N Q R +E+ + + +LE + KED N+ K++ A++ +
Sbjct: 847 IEKDQESIDNYEQ----NREALESEVATAEAELELL-KEDFASENSKTEKILLAASEKKL 901
Query: 716 QQFKYAIEIKNLLVEIVSCKWSYAEKHMA---SIEFDAKIRELEFNLKQHE--KLALQAS 770
+ E+ L I + S +++++ +I K+ +++ L++ + +
Sbjct: 902 VGKRLVSELTKLSGNITLLE-SEIDRYVSEWHAILRKCKLEDIDVPLREGSLTSIPIDDV 960
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ-A 829
+ D E ++ K E + + EL++E + E + + +Q+ + + +
Sbjct: 961 SNSGDITMGEEPSEPVINFEKFGVE-VDY--DELDEELRNDGS--ESMASVLQEKLREYS 1015
Query: 830 NSIFFLNQNI--LQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVA 887
+ ++ N+ ++ E + ++ L + A +K K +A+K+K L + +
Sbjct: 1016 EELDQMSPNLRAIERLETVETRLAKLDEEFAAARKAAKNAKERFNAVKQKRLQKFQAAFS 1075
Query: 888 QINETFSRNFQEMAVAGEVSLDEHE----SDFDKFGILIKVKFRQSGQLEVLSAHHQ-SG 942
I+E ++E+ + L D D+ L +KF ++ Q SG
Sbjct: 1076 HISEQIDPIYKELTKSPAFPLGGTAYLTLDDLDE-PYLGGIKFHAMPPMKRFRDMDQLSG 1134
Query: 943 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS 991
GE++++ + L ++ PF V+DEI+ +D N K+ + + AS
Sbjct: 1135 GEKTMAALALLFAIHSYQPSPFFVLDEIDAALDQTNVTKIANYIRQHAS 1183
Score = 93 (37.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 58/259 (22%), Positives = 109/259 (42%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIV-------QIEKRKRREMENHINLRKRKLESIEKED 697
Q +++ E E + QKE+ + +V +EK M L+ ++ IE+ D
Sbjct: 208 QYQEQKTEAERYQSQKEKRDSAQLVYLLWKLFHLEKSISSNMAEVTRLKADSIQLIERRD 267
Query: 698 DINTALAKLVDQAADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL 755
+ + KL ++ + N+ F + + L+ A K I K E
Sbjct: 268 ENTKEIEKLKEKEGSIRRNLLAFDRKVRKQEKLI---------ASKRPELISIAEKALES 318
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 815
+ NL++ ++ A + Y D ++ L+ AE F+ EKE L+ +
Sbjct: 319 KSNLRKIQRKAAEIEKDYSDQASTLQVLENQLTSLSA-AEK-EFLKDMQEKEQLKGLRLL 376
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
E + + S+A+ LN N+L + + R I+ S +++ + ++I +L
Sbjct: 377 PEDKEEYEGLRSEADK---LNSNLLFKLQTLNRNIKVTSQSKDSLTSIVGDLESKIKSLH 433
Query: 876 EKW--LPTLR-NLVAQINE 891
E L T R +L+A+INE
Sbjct: 434 ESVSSLDTERADLLAKINE 452
Score = 89 (36.4 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 48/225 (21%), Positives = 107/225 (47%)
Query: 654 EAAKLQKEREEII--NIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQA 710
E KL KE+E I N++ + RK R+ E I ++ +L SI EK + + L K+ +A
Sbjct: 272 EIEKL-KEKEGSIRRNLLAFD-RKVRKQEKLIASKRPELISIAEKALESKSNLRKIQRKA 329
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAE--KHMASIEFDAKIRELEFNLKQHEKLALQ 768
A++ A ++ L ++ S + E K M E +R L + +++E L +
Sbjct: 330 AEIEKDYSDQASTLQVLENQLTSLSAAEKEFLKDMQEKEQLKGLRLLPEDKEEYEGLRSE 389
Query: 769 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ 828
A + +++ +++ + +S+ I +LE + + ++ L+ D +++
Sbjct: 390 ADKLNSNLLFKLQTLNRNIKVTSQSKDSLTSIVGDLESKIKSLHESVSSLDTERADLLAK 449
Query: 829 ANSIFFLNQNILQEYEHRQRQI--EDLSTKQEADKKELKRFLAEI 871
N + L++++ +++++ +L K + +EL+ L +I
Sbjct: 450 INEK--IESLELEKHDQQKKRLTYSELFHKTQELNEELQSCLQKI 492
Score = 64 (27.6 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 43/184 (23%), Positives = 82/184 (44%)
Query: 653 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAAD 712
D+A+ LQ ++ ++ EK ++M+ L+ +L +KE+ L +A
Sbjct: 338 DQASTLQVLENQLTSLSAAEKEFLKDMQEKEQLKGLRLLPEDKEE-----YEGLRSEADK 392
Query: 713 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI--EFDAKIRELEFNLKQ--HEKLALQ 768
LN + ++ N +++ S ++ + SI + ++KI+ L ++ E+ L
Sbjct: 393 LN-SNLLFKLQTLNRNIKVTS----QSKDSLTSIVGDLESKIKSLHESVSSLDTERADLL 447
Query: 769 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFI-TPELEKEFLEMPTTIEELEAAIQDNIS 827
A ++ + E+E KH KR S F T EL +E I LEA+ N S
Sbjct: 448 AKINEKIESLELE---KHDQQKKRLTYSELFHKTQELNEELQSCLQKI--LEASADRNES 502
Query: 828 QANS 831
+ ++
Sbjct: 503 KQDA 506
Score = 50 (22.7 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
Identities = 14/67 (20%), Positives = 33/67 (49%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNK-LTLRQCSDRLKDMEDKNNKLLHA 426
H+ + L ++ +L + N+K ++ E EK Q K LT + + +++ ++ L
Sbjct: 433 HESVSSLDTERADLLAKINEK-IESLELEKHDQQKKRLTYSELFHKTQELNEELQSCLQK 491
Query: 427 LRNSGAE 433
+ + A+
Sbjct: 492 ILEASAD 498
Score = 50 (22.7 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 30/149 (20%), Positives = 59/149 (39%)
Query: 718 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDA-KIRELEFNLKQHEKLALQASLHYEDC 776
F + K+ L+ + + Y + E D K+ LE + + S ED
Sbjct: 677 FDLLTQTKDRLMHQIG-EIEYQKSSCVITESDTVKLHSLESEISLLKDKYTVVSRSVEDK 735
Query: 777 KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI------QDNISQAN 830
KKE+ H + + + + K E+ +E++E I + IS +
Sbjct: 736 KKEIGHYESLIKEKQPHLSELEMELRNFVKSRDELQIQVEKVEEKIFSGFCKRIGISDIH 795
Query: 831 SIFFLNQNILQEYEHRQRQIEDLSTKQEA 859
+ +++ Q + Q+Q+E TKQ++
Sbjct: 796 TYDEIHRTFTQSFT--QKQLE--FTKQKS 820
Score = 44 (20.5 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 858 EADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDK 917
E+D +L +EI LK+K+ R++ + E +++ + + L E E +
Sbjct: 705 ESDTVKLHSLESEISLLKDKYTVVSRSVEDKKKEI--GHYESLIKEKQPHLSELEMELRN 762
Query: 918 FGILIKVKFRQSGQLEV 934
F VK R Q++V
Sbjct: 763 F-----VKSRDELQIQV 774
Score = 37 (18.1 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 281 IEGKKQEKAILDGDCKKL 298
I+ +K E+ I G CK++
Sbjct: 772 IQVEKVEEKIFSGFCKRI 789
>RGD|61991 [details] [associations]
symbol:Smc1a "structural maintenance of chromosomes 1A"
species:10116 "Rattus norvegicus" [GO:0000075 "cell cycle
checkpoint" evidence=ISO;ISS] [GO:0000776 "kinetochore"
evidence=ISO;ISS] [GO:0003682 "chromatin binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA;ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IDA] [GO:0009314 "response to radiation"
evidence=ISO;ISS] [GO:0019827 "stem cell maintenance" evidence=ISO]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0030893
"meiotic cohesin complex" evidence=ISO;ISS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=ISO] [GO:0042770 "signal
transduction in response to DNA damage" evidence=ISO;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:61991 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0005737
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0032876 GO:GO:0000075 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AJ005113 IPI:IPI00209018 RefSeq:NP_113871.1 UniGene:Rn.11763
ProteinModelPortal:Q9Z1M9 STRING:Q9Z1M9 PhosphoSite:Q9Z1M9
PRIDE:Q9Z1M9 GeneID:63996 KEGG:rno:63996 NextBio:612558
ArrayExpress:Q9Z1M9 Genevestigator:Q9Z1M9 Uniprot:Q9Z1M9
Length = 1233
Score = 126 (49.4 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 81/384 (21%), Positives = 165/384 (42%)
Query: 652 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 703
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
L + + + + + NLL +CK + ++ D I + E + E
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGGSQGEE 961
Query: 764 KLA---LQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
++ +S++ + E+++ C + L DA+ + E I L+++ E + ++
Sbjct: 962 SVSGSQRTSSIYAREALIEIDYGDLC-EDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQR 1019
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+ A + + S+ Q E+E +++ + E KKE RF D
Sbjct: 1020 IAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNAC 1073
Query: 878 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLS 936
+ N + +I + SRN A G + +E D + + K FR L
Sbjct: 1074 FESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL---- 1128
Query: 937 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 996
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N
Sbjct: 1129 ----SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF- 1182
Query: 997 QCFLLTPKLLPDLEYSEACSILNI 1020
Q +++ L + Y++A S++ +
Sbjct: 1183 QAIVIS---LKEEFYTKAESLIGV 1203
Score = 124 (48.7 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 63/227 (27%), Positives = 101/227 (44%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
E VK DT N + N+ E+ + +Q E ++ +++K ++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAER--KEAKQEKEEADRYQALKDEV 216
Score = 90 (36.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 56/271 (20%), Positives = 116/271 (42%)
Query: 655 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 713
AA+ ++ ++E + + K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQALKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 714 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 773
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 774 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 833
+ K++E +K L + ++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNRQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 834 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 883
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 884 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 912
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 88 (36.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 55/261 (21%), Positives = 119/261 (45%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 711 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 763
L +Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNRQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 764 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 815
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 874
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 875 KEKWLPTLRNLVAQINETFSR 895
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 88 (36.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 770
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNRQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 771 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 826
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 827 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 913
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 70 (29.7 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 649 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 705
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 706 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 744
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 745 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 801
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 802 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 861
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 862 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 921
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 922 IKVKFRQSGQLEVLSAHH 939
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 9.1e-05, Sum P(4) = 9.1e-05
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 751 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 806
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 807 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 863
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 864 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 914
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 62 (26.9 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 134 EITKRF--NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
E+ + F I V N+ +F +++V +++ +L E +K QL + L E
Sbjct: 775 EVFEEFCREIGVRNIREF-EEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K+ E TVK++ + + +LK K ++ + + L+ KK
Sbjct: 834 KVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKK 881
Score = 58 (25.5 bits), Expect = 0.00064, Sum P(4) = 0.00064
Identities = 30/130 (23%), Positives = 56/130 (43%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E +SK K IE KR ++LK E++K++ ++ + + +EK +K+K L +
Sbjct: 241 ELASKNKEIEKDKKRMDKVEDELK----EKKKELGKMMREQQQIEK--EIKEKDSEL--N 292
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
K+ +YI +L K + +K GD +L + K
Sbjct: 293 QKRPQYIKAKENTSHKIKKLEAAKKSLQNRQKHYKKRK-------GDMDELEKEMLSVEK 345
Query: 308 RRMDFLEKVD 317
R +F E+++
Sbjct: 346 ARQEFEERME 355
Score = 58 (25.5 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 33/198 (16%), Positives = 79/198 (39%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDINTALAK 705
E+ +E E A +I I+Q +R+ ++++ +N + E +E + + +
Sbjct: 733 EKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCREIGVRN-IRE 791
Query: 706 LVDQAADLNIQQFKYAIEIKN--------LLVEIVSCKWSYAEKHM--ASIEFDA-KIRE 754
++ + K +E +N L E K + HM +++ D +I +
Sbjct: 792 FEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEK 851
Query: 755 LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT 814
L+ ++H K+ + +D K + + ++D + E I KE +
Sbjct: 852 LKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEMTHLQKE 911
Query: 815 IEELEAAIQDNISQANSI 832
+ +E ++ S +++
Sbjct: 912 VTAIETKLEQKRSDRHNL 929
Score = 57 (25.1 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 21/100 (21%), Positives = 47/100 (47%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E +KR L +F +D+ + +L LEE +K + ++ + + E ++
Sbjct: 381 EASKRAATLAQELEKF-NRDQKADQDRLD----LEERKKVETEAKIKQKLREIEENQKRI 435
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK 233
+ +E + + +L + K L E ++VE ++R + + K
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 45 (20.9 bits), Expect = 2.0e-10, Sum P(4) = 2.0e-10
Identities = 20/93 (21%), Positives = 41/93 (44%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDMED 418
Y+ D++ + Q+ + N+ ++K KE K + ++K + + D LK+ +
Sbjct: 209 YQALKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Query: 419 KNNKLLHALRNSGAENIFEAYCWLQQHRHELNK 451
+ K++ + E I E L Q R + K
Sbjct: 269 ELGKMMREQQQIEKE-IKEKDSELNQKRPQYIK 300
Score = 44 (20.5 bits), Expect = 2.6e-10, Sum P(4) = 2.6e-10
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 383 VQANQKRLQKSE------KEKILNQNKLT--LRQCSDRLKDMEDKNNKLLH-ALRNSGAE 433
++ NQKR++K E K+ + Q KL L + + K D+ NK L+ + G
Sbjct: 428 IEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDA 487
Query: 434 NIFEAYCWLQQHRHEL 449
I QQ + E+
Sbjct: 488 RIDRQESSRQQRKAEI 503
Score = 43 (20.2 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 436
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 437 EAYCWLQQHRHELNK 451
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 41 (19.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 76 RATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
R + Y+ ++S + L G+ EE R+ID NK
Sbjct: 434 RIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 40 (19.1 bits), Expect = 2.0e-10, Sum P(4) = 2.0e-10
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 490 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 550 -ISQFGLDSS 558
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 428 RNSGAENIFEAYC 440
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
Score = 37 (18.1 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS---DRLKDMEDKNNKLL 424
+Q LG+Q + ++ Q E + ++ + T+++ ++LK E ++ K++
Sbjct: 812 NQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKII 863
>UNIPROTKB|Q9Z1M9 [details] [associations]
symbol:Smc1a "Structural maintenance of chromosomes protein
1A" species:10116 "Rattus norvegicus" [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:61991 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0005737
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0032876 GO:GO:0000075 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AJ005113 IPI:IPI00209018 RefSeq:NP_113871.1 UniGene:Rn.11763
ProteinModelPortal:Q9Z1M9 STRING:Q9Z1M9 PhosphoSite:Q9Z1M9
PRIDE:Q9Z1M9 GeneID:63996 KEGG:rno:63996 NextBio:612558
ArrayExpress:Q9Z1M9 Genevestigator:Q9Z1M9 Uniprot:Q9Z1M9
Length = 1233
Score = 126 (49.4 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 81/384 (21%), Positives = 165/384 (42%)
Query: 652 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 703
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
L + + + + + NLL +CK + ++ D I + E + E
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGGSQGEE 961
Query: 764 KLA---LQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
++ +S++ + E+++ C + L DA+ + E I L+++ E + ++
Sbjct: 962 SVSGSQRTSSIYAREALIEIDYGDLC-EDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQR 1019
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+ A + + S+ Q E+E +++ + E KKE RF D
Sbjct: 1020 IAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNAC 1073
Query: 878 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLS 936
+ N + +I + SRN A G + +E D + + K FR L
Sbjct: 1074 FESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL---- 1128
Query: 937 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 996
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N
Sbjct: 1129 ----SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF- 1182
Query: 997 QCFLLTPKLLPDLEYSEACSILNI 1020
Q +++ L + Y++A S++ +
Sbjct: 1183 QAIVIS---LKEEFYTKAESLIGV 1203
Score = 124 (48.7 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 63/227 (27%), Positives = 101/227 (44%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
E VK DT N + N+ E+ + +Q E ++ +++K ++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAER--KEAKQEKEEADRYQALKDEV 216
Score = 90 (36.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 56/271 (20%), Positives = 116/271 (42%)
Query: 655 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 713
AA+ ++ ++E + + K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQALKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 714 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 773
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 774 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 833
+ K++E +K L + ++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNRQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 834 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 883
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 884 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 912
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 88 (36.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 55/261 (21%), Positives = 119/261 (45%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 711 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 763
L +Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNRQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 764 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 815
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 874
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 875 KEKWLPTLRNLVAQINETFSR 895
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 88 (36.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 770
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNRQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 771 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 826
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 827 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 913
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 70 (29.7 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 649 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 705
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 706 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 744
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 745 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 801
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 802 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 861
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 862 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 921
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 922 IKVKFRQSGQLEVLSAHH 939
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 9.1e-05, Sum P(4) = 9.1e-05
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 751 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 806
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 807 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 863
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 864 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 914
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 62 (26.9 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 134 EITKRF--NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
E+ + F I V N+ +F +++V +++ +L E +K QL + L E
Sbjct: 775 EVFEEFCREIGVRNIREF-EEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K+ E TVK++ + + +LK K ++ + + L+ KK
Sbjct: 834 KVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKK 881
Score = 58 (25.5 bits), Expect = 0.00064, Sum P(4) = 0.00064
Identities = 30/130 (23%), Positives = 56/130 (43%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E +SK K IE KR ++LK E++K++ ++ + + +EK +K+K L +
Sbjct: 241 ELASKNKEIEKDKKRMDKVEDELK----EKKKELGKMMREQQQIEK--EIKEKDSEL--N 292
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
K+ +YI +L K + +K GD +L + K
Sbjct: 293 QKRPQYIKAKENTSHKIKKLEAAKKSLQNRQKHYKKRK-------GDMDELEKEMLSVEK 345
Query: 308 RRMDFLEKVD 317
R +F E+++
Sbjct: 346 ARQEFEERME 355
Score = 58 (25.5 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 33/198 (16%), Positives = 79/198 (39%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDINTALAK 705
E+ +E E A +I I+Q +R+ ++++ +N + E +E + + +
Sbjct: 733 EKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCREIGVRN-IRE 791
Query: 706 LVDQAADLNIQQFKYAIEIKN--------LLVEIVSCKWSYAEKHM--ASIEFDA-KIRE 754
++ + K +E +N L E K + HM +++ D +I +
Sbjct: 792 FEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEK 851
Query: 755 LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT 814
L+ ++H K+ + +D K + + ++D + E I KE +
Sbjct: 852 LKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEMTHLQKE 911
Query: 815 IEELEAAIQDNISQANSI 832
+ +E ++ S +++
Sbjct: 912 VTAIETKLEQKRSDRHNL 929
Score = 57 (25.1 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 21/100 (21%), Positives = 47/100 (47%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E +KR L +F +D+ + +L LEE +K + ++ + + E ++
Sbjct: 381 EASKRAATLAQELEKF-NRDQKADQDRLD----LEERKKVETEAKIKQKLREIEENQKRI 435
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK 233
+ +E + + +L + K L E ++VE ++R + + K
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 45 (20.9 bits), Expect = 2.0e-10, Sum P(4) = 2.0e-10
Identities = 20/93 (21%), Positives = 41/93 (44%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDMED 418
Y+ D++ + Q+ + N+ ++K KE K + ++K + + D LK+ +
Sbjct: 209 YQALKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Query: 419 KNNKLLHALRNSGAENIFEAYCWLQQHRHELNK 451
+ K++ + E I E L Q R + K
Sbjct: 269 ELGKMMREQQQIEKE-IKEKDSELNQKRPQYIK 300
Score = 44 (20.5 bits), Expect = 2.6e-10, Sum P(4) = 2.6e-10
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 383 VQANQKRLQKSE------KEKILNQNKLT--LRQCSDRLKDMEDKNNKLLH-ALRNSGAE 433
++ NQKR++K E K+ + Q KL L + + K D+ NK L+ + G
Sbjct: 428 IEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDA 487
Query: 434 NIFEAYCWLQQHRHEL 449
I QQ + E+
Sbjct: 488 RIDRQESSRQQRKAEI 503
Score = 43 (20.2 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 436
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 437 EAYCWLQQHRHELNK 451
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 41 (19.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 76 RATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
R + Y+ ++S + L G+ EE R+ID NK
Sbjct: 434 RIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 40 (19.1 bits), Expect = 2.0e-10, Sum P(4) = 2.0e-10
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 490 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 550 -ISQFGLDSS 558
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 428 RNSGAENIFEAYC 440
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
Score = 37 (18.1 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS---DRLKDMEDKNNKLL 424
+Q LG+Q + ++ Q E + ++ + T+++ ++LK E ++ K++
Sbjct: 812 NQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKII 863
>MGI|MGI:1344345 [details] [associations]
symbol:Smc1a "structural maintenance of chromosomes 1A"
species:10090 "Mus musculus" [GO:0000075 "cell cycle checkpoint"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IPI] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0030893
"meiotic cohesin complex" evidence=ISO;IDA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=IDA] [GO:0042770 "signal
transduction in response to DNA damage" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=ISO] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
MGI:MGI:1344345 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0005654 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
GO:GO:0006281 GO:GO:0003682 GO:GO:0042770 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0006310
GO:GO:0030261 GO:GO:0009314 GO:GO:0032876 GO:GO:0019827
GO:GO:0000075 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
EMBL:AL672180 GO:GO:0036033 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AF047600 EMBL:BC131667 EMBL:AK007334 EMBL:AK013648
EMBL:AK017948 EMBL:AK088183 IPI:IPI00123870 RefSeq:NP_062684.2
UniGene:Mm.482095 PDB:2WD5 PDBsum:2WD5 ProteinModelPortal:Q9CU62
SMR:Q9CU62 DIP:DIP-57021N IntAct:Q9CU62 STRING:Q9CU62
PhosphoSite:Q9CU62 PaxDb:Q9CU62 PRIDE:Q9CU62
Ensembl:ENSMUST00000045312 GeneID:24061 KEGG:mmu:24061
GeneTree:ENSGT00580000081569 InParanoid:A2AFQ5
EvolutionaryTrace:Q9CU62 NextBio:304025 Bgee:Q9CU62
CleanEx:MM_SMC1A Genevestigator:Q9CU62
GermOnline:ENSMUSG00000041133 Uniprot:Q9CU62
Length = 1233
Score = 127 (49.8 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 81/384 (21%), Positives = 166/384 (43%)
Query: 652 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 703
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
L + + + + + NLL +CK + ++ D I + E + + E
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGSSQGEE 961
Query: 764 KLA---LQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
++ +S++ + E+++ C + L DA+ + E I L+++ E + ++
Sbjct: 962 SVSGSQRTSSIYAREALIEIDYGDLC-EDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQR 1019
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+ A + + S+ Q E+E +++ + E KKE RF D
Sbjct: 1020 IAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNAC 1073
Query: 878 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLS 936
+ N + +I + SRN A G + +E D + + K FR L
Sbjct: 1074 FESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL---- 1128
Query: 937 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 996
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N
Sbjct: 1129 ----SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF- 1182
Query: 997 QCFLLTPKLLPDLEYSEACSILNI 1020
Q +++ L + Y++A S++ +
Sbjct: 1183 QAIVIS---LKEEFYTKAESLIGV 1203
Score = 122 (48.0 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ A+ ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLK 213
Score = 98 (39.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 57/271 (21%), Positives = 118/271 (43%)
Query: 655 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 713
AA+ ++ ++E + ++ K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 714 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 773
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 774 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 833
+ K++E +K L +A++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 834 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 883
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 884 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 912
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 90 (36.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 770
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 771 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 826
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 827 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 913
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 86 (35.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 55/261 (21%), Positives = 118/261 (45%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 711 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 763
L Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 764 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 815
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 874
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 875 KEKWLPTLRNLVAQINETFSR 895
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 70 (29.7 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 649 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 705
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 706 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 744
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 745 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 801
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 802 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 861
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 862 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 921
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 922 IKVKFRQSGQLEVLSAHH 939
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 69 (29.3 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 57/280 (20%), Positives = 118/280 (42%)
Query: 751 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 806
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 807 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 863
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 864 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGI 920
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE + + +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEMEEIRKKL 898
Query: 921 LIKVKFRQSGQLEVLSAHHQSGGERSVS-TILYLVSLQDLTNCPFRVVDEINQG-MDPIN 978
K Q EV + + +RS +L +QD+ P +++G MD I+
Sbjct: 899 GGANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDI-KLP------LSKGTMDDIS 951
Query: 979 ERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSIL 1018
+ + Q + S L+ +++Y + C L
Sbjct: 952 QEEGSSQGEESVSGSQRTSSIYAREALI-EIDYGDLCEDL 990
Score = 62 (26.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 134 EITKRF--NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
E+ + F I V N+ +F +++V +++ +L E +K QL + L E
Sbjct: 775 EVFEEFCREIGVRNIREF-EEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K+ E TVK++ + + +LK K ++ + + L+ KK
Sbjct: 834 KVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKK 881
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 30/130 (23%), Positives = 56/130 (43%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E +SK K IE KR ++LK E++K++ ++ + + +EK +K+K L +
Sbjct: 241 ELASKNKEIEKDKKRMDKVEDELK----EKKKELGKMMREQQQIEK--EIKEKDSEL--N 292
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
K+ +YI +L K + +K GD +L + K
Sbjct: 293 QKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRK-------GDMDELEKEMLSVEK 345
Query: 308 RRMDFLEKVD 317
R +F E+++
Sbjct: 346 ARQEFEERME 355
Score = 57 (25.1 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 21/100 (21%), Positives = 47/100 (47%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E +KR L +F +D+ + +L LEE +K + ++ + + E ++
Sbjct: 381 EASKRAATLAQELEKF-NRDQKADQDRLD----LEERKKVETEAKIKQKLREIEENQKRI 435
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK 233
+ +E + + +L + K L E ++VE ++R + + K
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 44 (20.5 bits), Expect = 3.2e-10, Sum P(4) = 3.2e-10
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 383 VQANQKRLQKSE------KEKILNQNKLT--LRQCSDRLKDMEDKNNKLLH-ALRNSGAE 433
++ NQKR++K E K+ + Q KL L + + K D+ NK L+ + G
Sbjct: 428 IEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDA 487
Query: 434 NIFEAYCWLQQHRHEL 449
I QQ + E+
Sbjct: 488 RIDRQESSRQQRKAEI 503
Score = 44 (20.5 bits), Expect = 3.2e-10, Sum P(4) = 3.2e-10
Identities = 20/93 (21%), Positives = 41/93 (44%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDMED 418
Y+ D++ + Q+ + N+ ++K KE K + ++K + + D LK+ +
Sbjct: 209 YQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Query: 419 KNNKLLHALRNSGAENIFEAYCWLQQHRHELNK 451
+ K++ + E I E L Q R + K
Sbjct: 269 ELGKMMREQQQIEKE-IKEKDSELNQKRPQYIK 300
Score = 43 (20.2 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 436
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 437 EAYCWLQQHRHELNK 451
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 41 (19.5 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 76 RATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
R + Y+ ++S + L G+ EE R+ID NK
Sbjct: 434 RIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 40 (19.1 bits), Expect = 3.2e-10, Sum P(4) = 3.2e-10
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 490 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 550 -ISQFGLDSS 558
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 428 RNSGAENIFEAYC 440
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
>ASPGD|ASPL0000036762 [details] [associations]
symbol:AN2963 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008278 "cohesin
complex" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
HOGENOM:HOG000195481 KO:K06636 OMA:NALVCET OrthoDB:EOG42VCQD
RefSeq:XP_660567.1 ProteinModelPortal:Q5B917 SMR:Q5B917
STRING:Q5B917 EnsemblFungi:CADANIAT00010118 GeneID:2874104
KEGG:ani:AN2963.2 Uniprot:Q5B917
Length = 1261
Score = 114 (45.2 bits), Expect = 1.6e-10, Sum P(4) = 1.6e-10
Identities = 64/340 (18%), Positives = 141/340 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
+++EQ + ++ +L E + + ++ +K K + ++ +R+L+ KE +
Sbjct: 885 LESEQERVRNKLDELNAELDILREKLEEQKEKYGQSAENLAHHRRELQKRSKEVESTLRF 944
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQH 762
++ N +YA+ ++ +E + + + + D ++ + + +
Sbjct: 945 INGLETEIQRNSSS-RYAL-LRRCKLEDIDIPLTEESNPLDQLPIDELVQGADPDAMDVD 1002
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE-ELEAA 821
E +D EV+ L D ++ +LE+E LE T+ EL+
Sbjct: 1003 EDTQANGGFSVQDYGIEVDF--DSLGDTLKEDSD-----EKLEEELLEKVRTLNSELDKM 1055
Query: 822 IQDN--ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 879
+ + + S+ +N L+ E Q + K + D +E+ R +E L K
Sbjct: 1056 APNTRALERLESV----ENKLRATEKDFEQARKRARKAKDDFEEVMRRRSE---LFNKAF 1108
Query: 880 PTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL-SAH 938
+ + I +R+ + G+ LD +SD + + L +K+ L+
Sbjct: 1109 SHISEQIGPIYRELTRS-SNYPLGGQAYLDIEDSD-EPY--LDGIKYHAMPPLKRFRDME 1164
Query: 939 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPIN 978
H SGGE++++ + L ++ PF V+DE++ +D N
Sbjct: 1165 HLSGGEKTMAALALLFAIHSYQPSPFFVLDEVDAALDNTN 1204
Score = 105 (42.0 bits), Expect = 1.6e-10, Sum P(4) = 1.6e-10
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 21 GNIIEIELHNFMTFD--HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRAT 78
G +I +EL+NF ++ H + + +IGPNGSGKS+ + AI+ LG + L R+T
Sbjct: 2 GKLIRLELYNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVLGIKSSHL-RST 60
Query: 79 SIGAYVKRGEESGYIKISLRGD 100
++ + RG K+ G+
Sbjct: 61 NLRDLIYRGRVLRTSKVDADGN 82
Score = 88 (36.0 bits), Expect = 7.5e-08, Sum P(3) = 7.5e-08
Identities = 59/260 (22%), Positives = 112/260 (43%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTALAKL 706
QR+I+D +A++QK ++E+ K RR +E + N+ K D+ TA +
Sbjct: 270 QRMIDDSSAEIQKYQDEL-------KEYRRGVEKYERNVEDAKKSHARVGRDVATAEKNI 322
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI--EFD---AKIRELEFNLKQ 761
V + + I++ A+ + V+I K +A I E D A I++L+ NLK
Sbjct: 323 VKKEKE--IEEATNALVPIDEKVDITKRKVERYSSRIAEIGKERDTQSASIKQLQKNLKV 380
Query: 762 HEKLALQASLHYE-DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
EK A +E D +K + LS A +Q + E+ K ++ L+
Sbjct: 381 VEK----AQAQWEADWQKALSKQGGQLSQADQQ--EYHKLKEEVNKRSSAEQLKLDNLKR 434
Query: 821 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW-- 878
+ + NS+ + + + + + LS ++ A + +K EI+ K++
Sbjct: 435 QRKTDAEAYNSLKSKFDSTQWQLQTLETDTKALSERKAAANETVKTTSKEIEKKKKELNA 494
Query: 879 LPTLRNLVAQINETFSRNFQ 898
+ + R V+Q+ + Q
Sbjct: 495 ISSERLRVSQMRTEYEEKLQ 514
Score = 81 (33.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 63/277 (22%), Positives = 113/277 (40%)
Query: 654 EAAKLQKEREEIIN--IVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E LQ R IN I Q +++KR E EN+ + + ++I I L
Sbjct: 218 EQQTLQLNRRRAINSEIKQYQEQKR-EAENYARKAEERDQAIITH--ILWKLFHFQRMID 274
Query: 712 DLNIQQFKYAIEIKNLL--VEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE-KLALQ 768
D + + KY E+K VE A+K A + D E K+ E + A
Sbjct: 275 DSSAEIQKYQDELKEYRRGVEKYERNVEDAKKSHARVGRDVATAEKNIVKKEKEIEEATN 334
Query: 769 ASLHYED----CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 824
A + ++ K++VE +++ ++ ++ + +L+K + + EA Q
Sbjct: 335 ALVPIDEKVDITKRKVERYSSRIAEIGKERDTQSASIKQLQKNLKVVEKAQAQWEADWQK 394
Query: 825 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL---AEI-DALKEKWLP 880
+S+ L+Q QEY + ++ S+ ++ LKR AE ++LK K+
Sbjct: 395 ALSKQGGQ--LSQADQQEYHKLKEEVNKRSSAEQLKLDNLKRQRKTDAEAYNSLKSKFDS 452
Query: 881 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDK 917
T L Q ET ++ E A ++ + +K
Sbjct: 453 TQWQL--QTLETDTKALSERKAAANETVKTTSKEIEK 487
Score = 77 (32.2 bits), Expect = 1.6e-10, Sum P(4) = 1.6e-10
Identities = 51/227 (22%), Positives = 93/227 (40%)
Query: 100 DTKEEHLTIMRKIDTRNKS--------EWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLP 151
D K+ H + R + T K+ E N +VP E ++ITKR + ++ +
Sbjct: 303 DAKKSHARVGRDVATAEKNIVKKEKEIEEATNA-LVPIDEKVDITKRKVERYSSRIAEIG 361
Query: 152 QDRVCEFAKLSPV-KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECT-VKRNGDTLNQ 209
++R + A + + K L+ EKA + Q AL ++ +L + + + +N
Sbjct: 362 KERDTQSASIKQLQKNLKVVEKAQAQWEADWQK-ALSKQGGQLSQADQQEYHKLKEEVN- 419
Query: 210 LKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXX 269
K + EQ K RQR E S+K K ++ ++ E
Sbjct: 420 -KRSSAEQLKLDNLKRQRKTDAEAYNSLKSKFDSTQWQLQTLE-----TDTKALSERKAA 473
Query: 270 XXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKV 316
T+ SK IE KK+E + + ++S + E ++ L+K+
Sbjct: 474 ANETVKTTSKEIEKKKKELNAISSERLRVSQMRTEYEEKLQVVLKKL 520
Score = 73 (30.8 bits), Expect = 2.5e-10, Sum P(4) = 2.5e-10
Identities = 32/145 (22%), Positives = 67/145 (46%)
Query: 110 RKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEE 169
R I ++ SE+ N +VV + E + NI + + Q V A SP L
Sbjct: 133 RSITSQGVSEYRINNRVVTAQQYNEALEAENILIKARNFLVFQGDVEAIASQSPKDLTRL 192
Query: 170 TEKAVGDPQLPVQHCAL---VEKSSKLKTIECTVKRNGDTLN-QLKALNVEQEKDVERVR 225
E+ G + ++ L E+S++ +T++ +R +N ++K EQ+++ E
Sbjct: 193 IEQISGSLEYKAEYERLKAEAEESAEQQTLQLNRRR---AINSEIKQYQ-EQKREAENYA 248
Query: 226 QRAELLEKVESMKKKLPWLKYDMKK 250
++AE E+ +++ + W + ++
Sbjct: 249 RKAE--ERDQAIITHILWKLFHFQR 271
Score = 70 (29.7 bits), Expect = 5.6e-06, Sum P(4) = 5.6e-06
Identities = 48/237 (20%), Positives = 104/237 (43%)
Query: 646 TEQRLIEDEAAKLQKE----REEIINIVQIEKRKRREME---NHI-NLRKRKLESIEKED 697
TE+ ++ E L++ REE+ + + K K E++ + +LR + E E D
Sbjct: 730 TEEETLQGELVGLEQRLAYAREELKALERNLKDKYTELDFVKRQLEDLRPKYTEKQEVLD 789
Query: 698 DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
+++ A+A Q A ++ Y K L + Y E S+ +A ++LEF
Sbjct: 790 ELDEAIA--TSQDAVSGVEDEIYRKFCKRLGYSNIR---EY-EVQQGSLHEEAAQKKLEF 843
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
+K ++ L +E ++ ++ ++ + Q + A + ELE E + ++E
Sbjct: 844 TT---QKSRIENQLSFE--QQRLQATTDRIASLQAQHQRDANMIGELESEQERVRNKLDE 898
Query: 818 LEAAI---QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 871
L A + ++ + + + Q+ + H +R+++ S + E+ + + EI
Sbjct: 899 LNAELDILREKLEEQKEKY--GQSA-ENLAHHRRELQKRSKEVESTLRFINGLETEI 952
Score = 61 (26.5 bits), Expect = 4.1e-05, Sum P(4) = 4.1e-05
Identities = 49/248 (19%), Positives = 103/248 (41%)
Query: 661 EREEIINIVQIEKRKRREMENHINLRKRKLESIEKED--------DINTALAKLVDQAAD 712
+R E + + K K + M + NL K E+E + A A+ +A +
Sbjct: 698 KRWEDSEVESLFKLKDKIMADLANLPKGHRRGTEEETLQGELVGLEQRLAYAREELKALE 757
Query: 713 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLH 772
N++ KY E+ + ++ + Y EK E D I Q ++ ++
Sbjct: 758 RNLKD-KYT-ELDFVKRQLEDLRPKYTEKQEVLDELDEAIAT-----SQDAVSGVEDEIY 810
Query: 773 YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI 832
+ CK+ + + ++ + + Q S+ + + EF + IE + + + QA +
Sbjct: 811 RKFCKR-LGY--SNIREYEVQQGSLHEEAAQKKLEFTTQKSRIEN-QLSFEQQRLQATTD 866
Query: 833 FFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINET 892
+ + +++ I +L ++QE + +L AE+D L+EK L + Q E
Sbjct: 867 RIAS--LQAQHQRDANMIGELESEQERVRNKLDELNAELDILREK-LEEQKEKYGQSAEN 923
Query: 893 FSRNFQEM 900
+ + +E+
Sbjct: 924 LAHHRREL 931
Score = 58 (25.5 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 22/111 (19%), Positives = 56/111 (50%)
Query: 134 EITKRF--NIQVNNLTQF-LPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
EI ++F + +N+ ++ + Q + E A + KL T+K+ + QL + L +
Sbjct: 808 EIYRKFCKRLGYSNIREYEVQQGSLHEEA--AQKKLEFTTQKSRIENQLSFEQQRLQATT 865
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELL-EKVESMKKK 240
++ +++ +R+ + + +L++ ++ + ++L EK+E K+K
Sbjct: 866 DRIASLQAQHQRDANMIGELESEQERVRNKLDELNAELDILREKLEEQKEK 916
Score = 43 (20.2 bits), Expect = 2.5e-10, Sum P(4) = 2.5e-10
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 370 KIEKLGSQILELGVQ-----ANQKRLQKSEK 395
K+E+ S+I E+G + A+ K+LQK+ K
Sbjct: 349 KVERYSSRIAEIGKERDTQSASIKQLQKNLK 379
Score = 41 (19.5 bits), Expect = 1.6e-10, Sum P(4) = 1.6e-10
Identities = 11/43 (25%), Positives = 26/43 (60%)
Query: 384 QANQKRLQ-KSEKEKILNQ---NKLTLRQCSDRLKDMEDKNNK 422
+A QK+L+ ++K +I NQ + L+ +DR+ ++ ++ +
Sbjct: 835 EAAQKKLEFTTQKSRIENQLSFEQQRLQATTDRIASLQAQHQR 877
Score = 38 (18.4 bits), Expect = 3.2e-10, Sum P(4) = 3.2e-10
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 384 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQ 443
Q R + +EK+++L++ + D + +ED+ + + G NI E Y Q
Sbjct: 773 QLEDLRPKYTEKQEVLDELDEAIATSQDAVSGVEDEIYRKF--CKRLGYSNIRE-YEVQQ 829
Query: 444 QHRHE 448
HE
Sbjct: 830 GSLHE 834
Score = 37 (18.1 bits), Expect = 4.0e-10, Sum P(4) = 4.0e-10
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 382 GVQANQKRLQKSEKEKI 398
G Q N KR + SE E +
Sbjct: 692 GPQQNSKRWEDSEVESL 708
>UNIPROTKB|F1SH51 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051383 "kinetochore organization" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045132
"meiotic chromosome segregation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 EMBL:CU466375 RefSeq:XP_001927540.1 UniGene:Ssc.7850
Ensembl:ENSSSCT00000012842 GeneID:100152361 KEGG:ssc:100152361
Uniprot:F1SH51
Length = 1288
Score = 147 (56.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 73/344 (21%), Positives = 156/344 (45%)
Query: 652 EDEAAKLQKEREEIINIV---QIE----KRKRREMENHINLRKRKLESIEKE-DDINTAL 703
+D+ K+ K+ +E + + Q+ R ++ ++ + +++++ EKE DD+ T L
Sbjct: 903 QDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDSVFRTEKEIKDTEKEVDDLTTEL 962
Query: 704 AKLVDQAADL--NIQQFKYAI-EI----KNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 756
L D+AA++ N + ++ EI ++LL E+ + + ++ K+ +++
Sbjct: 963 KSLEDKAAEVIKNTNAAEESLPEIQKEHRSLLQELKVIQENEHALQKDALSIKLKLEQID 1022
Query: 757 FNLKQHEKLALQASLHYEDCKKEVEHCRKH-LSDAKRQAESIAFITPELEKEFLEMPTTI 815
++ +H + + Y +KE+ H + D E IA +TPE + E ++ P +I
Sbjct: 1023 GHIGEHN-----SKIKY--WQKEISKISLHPIED--NPVEEIAVLTPE-DLEAIKNPDSI 1072
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR--FLAEIDA 873
A ++ + N + EY+ ++ L E DK +R F +
Sbjct: 1073 TNQIALLEAQCHEMKP----NLGAIVEYKKKEELY--LQRVAELDKITYERDNFRQAYED 1126
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQ 931
L+++ L I N+Q + + G+ L+ +S D F GI+ V+ +
Sbjct: 1127 LRKQRLNEFMAGFYIITNKLKENYQMLTLGGDAELELVDS-LDPFAEGIMFSVRPPKKSW 1185
Query: 932 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
++ + SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1186 KKIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1226
Score = 96 (38.9 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 91/425 (21%), Positives = 161/425 (37%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 142
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E I+ I G+ E + + R N S + +GK
Sbjct: 143 SVLIHNSDEHKDIQSCTVEVHFQKIIDKEGNDYEVVPNSNFYVSRTAYRDNTSVYHISGK 202
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P E E + + +
Sbjct: 203 KKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSGR 262
Query: 186 LVEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLE-KVESMKKKL 241
L E L + +E + G+ LN++K VE+EKD +E + A E L + E +KK
Sbjct: 263 LNEPIKVLCRRVEILNEHRGEKLNRVKM--VEKEKDALEGEKNIAIEFLTLENEIFRKKN 320
Query: 242 PWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL 301
+Y YI +HE +K I K IL + K +
Sbjct: 321 HVCQY------YIYDLQKRIAEMETQK---EKIHEDTKEINEKSN---ILSNEMKAKNKA 368
Query: 302 INENSKRRMDFLEKVDXXXXXXXXKY-KXXXXXXXXXXXXXXXILKARXXXXXXXXXXQT 360
+ + K+ L K+ K+ K KA+ +
Sbjct: 369 VKDVEKK----LNKITKFIEENKEKFTKLDLEDVQVREKLKHATSKAKKLEKQLQKDKEK 424
Query: 361 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL-KDMEDK 419
V ++ K E + I E + N +K ++EK L + +L+Q + L K+ E +
Sbjct: 425 VEEFKSIPAKSENI---ITETTTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQKEKESQ 481
Query: 420 NNKLL 424
+L+
Sbjct: 482 EKELM 486
Score = 51 (23.0 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 32/143 (22%), Positives = 63/143 (44%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITK-RFNIQVNNLTQFLPQDRVCEFAK 160
K+E + ++ +++ K F+ V +++ + +I ++ + Q + A
Sbjct: 468 KQETQGLQKEKESQEKELMGFSKSVNEARSKMDVAQSELDIYLSRYNTAVSQLSKAKDAL 527
Query: 161 LSPVKLLEETEKAVGD--PQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
++ + L+E + A+GD +LP C L EK +L+ K + +N K+L
Sbjct: 528 MAASETLKERKAAIGDIEAKLPQTECELKEKEKELQ------KLTQEEIN-FKSL----- 575
Query: 219 KDVERVRQRAELLEKVESMKKKL 241
VR +L +KVE K L
Sbjct: 576 -----VR---DLFQKVEEAKSSL 590
Score = 38 (18.4 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 272 NTLHEFSKPIEGKKQEKAILDGDCKKLSS--LINENSKRRMDFLEK 315
NTL +F+ I+ +++ L K+L + L +++ LE+
Sbjct: 816 NTLEKFTASIQRLSEQEEYLRVQVKELEANVLATAPDQKKQKLLEE 861
>UNIPROTKB|Q14683 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9606 "Homo sapiens" [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0000777
"condensed chromosome kinetochore" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0042770
"signal transduction in response to DNA damage" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=IDA] [GO:0009314 "response to radiation"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008280 "cohesin core heterodimer" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=TAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=TAS] [GO:0000776 "kinetochore" evidence=IDA] [GO:0007126
"meiosis" evidence=ISS] [GO:0000070 "mitotic sister chromatid
segregation" evidence=TAS] [GO:0030893 "meiotic cohesin complex"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007091 "metaphase/anaphase transition of mitotic
cell cycle" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
Reactome:REACT_115566 GO:GO:0005654 Reactome:REACT_21300
GO:GO:0000776 GO:GO:0051301 GO:GO:0007052 GO:GO:0006281
Reactome:REACT_1675 GO:GO:0003682 GO:GO:0042770
Reactome:REACT_111183 GO:GO:0006310 GO:GO:0000794 GO:GO:0030261
GO:GO:0009314 GO:GO:0003777 GO:GO:0032876 GO:GO:0007091
GO:GO:0000398 GO:GO:0000075 GO:GO:0000236 GO:GO:0000777
GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553 EMBL:Z97054
Orphanet:199 EMBL:AL161779 GO:GO:0030893 GO:GO:0008280 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:S78271 EMBL:D80000 EMBL:BC112127 IPI:IPI00291939 PIR:I54383
RefSeq:NP_006297.2 UniGene:Hs.211602 ProteinModelPortal:Q14683
SMR:Q14683 DIP:DIP-30911N IntAct:Q14683 MINT:MINT-233274
STRING:Q14683 PhosphoSite:Q14683 DMDM:29336622 PaxDb:Q14683
PeptideAtlas:Q14683 PRIDE:Q14683 Ensembl:ENST00000322213
GeneID:8243 KEGG:hsa:8243 UCSC:uc004dsg.3 GeneCards:GC0XM053417
HGNC:HGNC:11111 HPA:CAB025404 HPA:HPA005499 MIM:300040 MIM:300590
neXtProt:NX_Q14683 PharmGKB:PA35961 InParanoid:Q14683 OMA:NALVCET
PhylomeDB:Q14683 ChiTaRS:SMC1A GenomeRNAi:8243 NextBio:31006
ArrayExpress:Q14683 Bgee:Q14683 CleanEx:HS_SMC1A
Genevestigator:Q14683 GermOnline:ENSG00000072501 Uniprot:Q14683
Length = 1233
Score = 126 (49.4 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 79/383 (20%), Positives = 166/383 (43%)
Query: 652 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 703
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLL--VEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 761
L + + + + + NLL ++ K ++ M I + + E ++
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGEDSVSG 965
Query: 762 HEKLALQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
++++ S++ + E+++ C + L DA+ + E I L+++ E + ++ +
Sbjct: 966 SQRIS---SIYAREALIEIDYGDLC-EDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQRI 1020
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
A + + S+ Q E+E +++ + E KKE RF D +
Sbjct: 1021 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNACF 1074
Query: 879 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLSA 937
N + +I + SRN A G + +E D + + K FR L
Sbjct: 1075 ESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL----- 1128
Query: 938 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQ 997
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N Q
Sbjct: 1129 ---SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF-Q 1183
Query: 998 CFLLTPKLLPDLEYSEACSILNI 1020
+++ L + Y++A S++ +
Sbjct: 1184 AIVIS---LKEEFYTKAESLIGV 1203
Score = 122 (48.0 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ A+ ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLK 213
Score = 98 (39.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 57/271 (21%), Positives = 118/271 (43%)
Query: 655 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 713
AA+ ++ ++E + ++ K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 714 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 773
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 774 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 833
+ K++E +K L +A++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 834 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 883
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 884 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 912
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 90 (36.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 770
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 771 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 826
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 827 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 913
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 86 (35.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 55/261 (21%), Positives = 118/261 (45%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 711 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 763
L Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 764 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 815
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 874
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 875 KEKWLPTLRNLVAQINETFSR 895
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 70 (29.7 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 649 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 705
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 706 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 744
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 745 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 801
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 802 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 861
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 862 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 921
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 922 IKVKFRQSGQLEVLSAHH 939
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 751 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 806
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 807 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 863
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 864 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 914
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 62 (26.9 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 134 EITKRF--NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
E+ + F I V N+ +F +++V +++ +L E +K QL + L E
Sbjct: 775 EVFEEFCREIGVRNIREF-EEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K+ E TVK++ + + +LK K ++ + + L+ KK
Sbjct: 834 KVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKK 881
Score = 59 (25.8 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 30/130 (23%), Positives = 56/130 (43%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E +SK K IE KR ++LK E++K++ ++ + + +EK +K+K L +
Sbjct: 241 ELASKNKEIEKDKKRMDKVEDELK----EKKKELGKMMREQQQIEK--EIKEKDSEL--N 292
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
K+ +YI +L K + +K GD +L + K
Sbjct: 293 QKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRK-------GDMDELEKEMLSVEK 345
Query: 308 RRMDFLEKVD 317
R +F E+++
Sbjct: 346 ARQEFEERME 355
Score = 57 (25.1 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 21/100 (21%), Positives = 47/100 (47%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E +KR L +F +D+ + +L LEE +K + ++ + + E ++
Sbjct: 381 EASKRAATLAQELEKF-NRDQKADQDRLD----LEERKKVETEAKIKQKLREIEENQKRI 435
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK 233
+ +E + + +L + K L E ++VE ++R + + K
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 44 (20.5 bits), Expect = 4.0e-10, Sum P(4) = 4.0e-10
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 383 VQANQKRLQKSE------KEKILNQNKLT--LRQCSDRLKDMEDKNNKLLH-ALRNSGAE 433
++ NQKR++K E K+ + Q KL L + + K D+ NK L+ + G
Sbjct: 428 IEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDA 487
Query: 434 NIFEAYCWLQQHRHEL 449
I QQ + E+
Sbjct: 488 RIDRQESSRQQRKAEI 503
Score = 44 (20.5 bits), Expect = 4.0e-10, Sum P(4) = 4.0e-10
Identities = 20/93 (21%), Positives = 41/93 (44%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDMED 418
Y+ D++ + Q+ + N+ ++K KE K + ++K + + D LK+ +
Sbjct: 209 YQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Query: 419 KNNKLLHALRNSGAENIFEAYCWLQQHRHELNK 451
+ K++ + E I E L Q R + K
Sbjct: 269 ELGKMMREQQQIEKE-IKEKDSELNQKRPQYIK 300
Score = 43 (20.2 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 436
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 437 EAYCWLQQHRHELNK 451
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 41 (19.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 76 RATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
R + Y+ ++S + L G+ EE R+ID NK
Sbjct: 434 RIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 40 (19.1 bits), Expect = 4.0e-10, Sum P(4) = 4.0e-10
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 490 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 550 -ISQFGLDSS 558
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 428 RNSGAENIFEAYC 440
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
>UNIPROTKB|O93308 [details] [associations]
symbol:smc1a "Structural maintenance of chromosomes protein
1A" species:8355 "Xenopus laevis" [GO:0000075 "cell cycle
checkpoint" evidence=ISS] [GO:0000776 "kinetochore" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007126 "meiosis" evidence=ISS] [GO:0009314
"response to radiation" evidence=ISS] [GO:0030893 "meiotic cohesin
complex" evidence=ISS] [GO:0042770 "signal transduction in response
to DNA damage" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0000075 GO:GO:0007062 SUPFAM:SSF75553
GO:GO:0030893 HOVERGEN:HBG039593 EMBL:AF051784
RefSeq:NP_001165905.1 UniGene:Xl.4734 ProteinModelPortal:O93308
IntAct:O93308 GeneID:100379087 KEGG:xla:100379087 CTD:100379087
Uniprot:O93308
Length = 1232
Score = 132 (51.5 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 61/222 (27%), Positives = 101/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFHRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + D+ EE + ++ SE+ N KVV E + ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEDSGEEK--VFSRVIVGGSSEYKINNKVVQLSEYSDSLEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ AE ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEAERYQRLK 213
Score = 118 (46.6 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 83/393 (21%), Positives = 166/393 (42%)
Query: 644 MQT-EQRLIED--EAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESI 693
+QT EQ + +D E KL+KE + + I+ Q++ K + + ++ +N + +E I
Sbjct: 835 VQTWEQSVKKDDNEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHLMEDI 894
Query: 694 EKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 752
K+ N + L + + + + + NLL +CK S + ++ D
Sbjct: 895 RKKLGSANKEVTHLQKEVTAIETKLEQKRSDRHNLLQ---ACKMSDIKLPLSKGTMDDIS 951
Query: 753 RELEFNLKQHEKLALQAS--LHYEDCKKEVEHC--RKHLSDAKRQAESIAFITPELEKEF 808
+E + + + Q S ++ ++ E+++ + L DA + I L ++
Sbjct: 952 QEEGSSQGEESASSSQRSSTVYAKEALIEIDYSDLSEDLKDAVAD-DDIKQEMSALHQKI 1010
Query: 809 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 868
E + ++ + A + + S+ Q E+E +++ + E KKE RF
Sbjct: 1011 NEQQSILQRISAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQTKKE--RF- 1067
Query: 869 AEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FR 927
D + N + +I + SRN A G + +E D + + K FR
Sbjct: 1068 ---DRFNACFESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFR 1123
Query: 928 QSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLV 987
L SGGE++V+ + L ++ PF V+DEI+ +D N K+ +
Sbjct: 1124 PMDNL--------SGGEKTVAALALLFAIHSYKPSPFFVLDEIDAALDNTNIGKV-ANYI 1174
Query: 988 RAASQPNTPQCFLLTPKLLPDLEYSEACSILNI 1020
+ S N Q +++ L + Y++A S++ +
Sbjct: 1175 KEQSMSNF-QAIVIS---LKEEFYTKAESLIGV 1203
Score = 91 (37.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 48/218 (22%), Positives = 98/218 (44%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQA 710
E + AK +KE E + ++ K I L+ KL E E + +N L+ + ++
Sbjct: 195 ERKEAKQEKEEAE-----RYQRLKDEVARAQIQLQLFKLYHNESEIEKLNKELS-VKNKG 248
Query: 711 ADLNIQQF-KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 769
+ + + K E+K+ E+ + +IE + K ++ E N K + + +
Sbjct: 249 IEKDKKHMDKVEEELKDKKKELGKMM-----REQQAIEKEIKEKDAELNQKLPQYIKAKE 303
Query: 770 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 829
+ ++ K+ +K L +A++Q + ELEKE L + +E E +++
Sbjct: 304 NPSHKI--KKFRAAKKSLQNAQKQYKKRKADMDELEKEMLSVEKARQEFEERMEEESQSQ 361
Query: 830 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 867
L +N +++Y HR + E+ S + +EL++F
Sbjct: 362 GRDLTLEENQVKKY-HRLK--EEASKRAATLAQELEKF 396
Score = 72 (30.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 73/342 (21%), Positives = 148/342 (43%)
Query: 655 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA--D 712
A + K ++E+ V+ E+ + N+ + E+ +++++ +L D+ A
Sbjct: 165 AQEYDKRKKEM---VKAEEDTQFNYHRKKNIAAERKEAKQEKEEAER-YQRLKDEVARAQ 220
Query: 713 LNIQQFK-Y--AIEIKNLLVEIVSCKWSYAEK---HMASIEFDAKIRELEFNLKQHEKLA 766
+ +Q FK Y EI+ L E+ S K EK HM +E + K ++ E E+ A
Sbjct: 221 IQLQLFKLYHNESEIEKLNKEL-SVKNKGIEKDKKHMDKVEEELKDKKKELGKMMREQQA 279
Query: 767 LQASLHYEDCK--KEVEHCRKHLSDAKRQAESIAFITPELE---KEFLEMPTTIEELEAA 821
++ + +D + +++ K + + + L+ K++ + ++ELE
Sbjct: 280 IEKEIKEKDAELNQKLPQYIKAKENPSHKIKKFRAAKKSLQNAQKQYKKRKADMDELEKE 339
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
+ ++ +A F + ++E Q Q DL T +E K+ R E K T
Sbjct: 340 ML-SVEKARQEF---EERMEE--ESQSQGRDL-TLEENQVKKYHRLKEEAS----KRAAT 388
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQ--LEVLSAHH 939
L AQ E F+R+ + A + L+E + + I K++ + Q +E L +
Sbjct: 389 L----AQELEKFNRD--QKADQDRLDLEERKKVETEAKIKQKLRELEENQKRIEKLEEYI 442
Query: 940 QSGGERSVSTILYLV-SLQDLTNCPFRVVDEINQGMDPINER 980
+ ++S+ L +L + R +DEIN ++ + E+
Sbjct: 443 ATS-KQSLEEQKNLEETLTEEVEMAKRRIDEINSELNQVMEQ 483
Score = 71 (30.1 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 40/183 (21%), Positives = 81/183 (44%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRK------RREMENHINLRKRKLESIE----KE 696
E++ +E EA QK RE N +IEK + ++ +E NL + E +E +
Sbjct: 411 ERKKVETEAKIKQKLRELEENQKRIEKLEEYIATSKQSLEEQKNLEETLTEEVEMAKRRI 470
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIV-SCKWSYAEKHMASIEFDAKIREL 755
D+IN+ L ++++Q D I + + + + + EI+ S K Y + + +
Sbjct: 471 DEINSELNQVMEQLGDARIDRQESSRQQRK--AEIMESIKRLYPGSVYGRLIDLCQPTQK 528
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 815
++ + + L D +K C +++ + + + E+ L ++LE+ T
Sbjct: 529 KYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETF------LPLDYLEVKPTD 582
Query: 816 EEL 818
E L
Sbjct: 583 ERL 585
Score = 68 (29.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 32/133 (24%), Positives = 61/133 (45%)
Query: 108 IMRKIDTRNKSEWFFNGKVVP-KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKL 166
I R I +R++ K+ + EV E R I V N+ +F +++V +++ +L
Sbjct: 751 IKRIIQSRDREMKDLKEKMNQVEDEVFEEFCR-EIGVRNIREF-EEEKVKRQNEIAKKRL 808
Query: 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ 226
E +K QL + L E K++T E +VK++ + + +LK K ++
Sbjct: 809 EFENQKTRLGIQLDYEKNQLKEDQGKVQTWEQSVKKDDNEIEKLKKEEQRHMKIIDETMA 868
Query: 227 RAELLEKVESMKK 239
+ + L+ KK
Sbjct: 869 QLQDLKNQHLAKK 881
Score = 66 (28.3 bits), Expect = 5.1e-07, Sum P(4) = 5.1e-07
Identities = 56/277 (20%), Positives = 116/277 (41%)
Query: 751 KIRELEFNLKQHEKLALQA---SLHYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 806
K R L N+++ KL + S D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLAMNMQEKSKLESELANFSPRINDIKRIIQSRDREMKDLKEKMNQVEDEVFEEFCR 782
Query: 807 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 863
E + EE + Q+ I++ + F NQ + ++ + Q+++ K + ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDYEKNQLKEDQGKVQTWEQS 841
Query: 864 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEH--ESDFDKF 918
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ H E K
Sbjct: 842 VKKDDNEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHLMEDIRKKL 898
Query: 919 GILIK-VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQG-MDP 976
G K V Q + + Q +R +L + D+ P +++G MD
Sbjct: 899 GSANKEVTHLQKEVTAIETKLEQKRSDRH--NLLQACKMSDI-KLP------LSKGTMDD 949
Query: 977 INERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSE 1013
I++ + Q +AS L+ +++YS+
Sbjct: 950 ISQEEGSSQGEESASSSQRSSTVYAKEALI-EIDYSD 985
Score = 65 (27.9 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 73/364 (20%), Positives = 145/364 (39%)
Query: 649 RLIEDEAAKLQKEREEIINIVQ-IEKRKRRE--MENHINLRKRKLESIEKEDDINTALAK 705
R +E+ +++K E I Q +E++K E + + + KR+++ I E +N + +
Sbjct: 426 RELEENQKRIEKLEEYIATSKQSLEEQKNLEETLTEEVEMAKRRIDEINSE--LNQVMEQ 483
Query: 706 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 744
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 745 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 801
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDERLRE-LKGAKLVIDVIRYEP 602
Query: 802 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 861
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 862 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 921
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 922 IKVKFRQSGQLEVLSAHHQSGGERSVSTI-LYLVSLQDLTNCPFRVVDEINQGMDPINER 980
+++K+ QS LE H + + S + L + N R++ ++ M + E
Sbjct: 710 MRLKYSQS-DLEQTKTRHLAMNMQEKSKLESELANFSPRINDIKRIIQSRDREMKDLKE- 767
Query: 981 KMFQ 984
KM Q
Sbjct: 768 KMNQ 771
Score = 58 (25.5 bits), Expect = 5.1e-07, Sum P(4) = 5.1e-07
Identities = 28/127 (22%), Positives = 61/127 (48%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES----IEK-EDDINTALAK 705
+ E K ++++ + + +E+RK+ E E I + R+LE IEK E+ I T+
Sbjct: 389 LAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLRELEENQKRIEKLEEYIATSKQS 448
Query: 706 LVDQAADLNIQQ-FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 764
L +Q N+++ +E+ ++ ++ + + + + DA+I E + +Q K
Sbjct: 449 LEEQK---NLEETLTEEVEMAKRRIDEINSELNQVMEQLG----DARIDRQESS-RQQRK 500
Query: 765 LALQASL 771
+ S+
Sbjct: 501 AEIMESI 507
Score = 56 (24.8 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 28/151 (18%), Positives = 61/151 (40%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDINTA 702
MQ + +L E E A +I I+Q R+ ++++ +N + E +E +
Sbjct: 731 MQEKSKL-ESELANFSPRINDIKRIIQSRDREMKDLKEKMNQVEDEVFEEFCREIGVRN- 788
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+ + ++ + K +E +N + + Y EK+ E K++ E ++K+
Sbjct: 789 IREFEEEKVKRQNEIAKKRLEFENQKTRL-GIQLDY-EKNQLK-EDQGKVQTWEQSVKKD 845
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQ 793
+ + + K ++ L D K Q
Sbjct: 846 DNEIEKLKKEEQRHMKIIDETMAQLQDLKNQ 876
Score = 45 (20.9 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 373 KLGSQILELGVQANQKRLQKSE------KEKILNQNKL--TLRQCSDRLKDMEDK-NNKL 423
K+ ++ EL + NQKR++K E K+ + Q L TL + + K D+ N++L
Sbjct: 420 KIKQKLREL--EENQKRIEKLEEYIATSKQSLEEQKNLEETLTEEVEMAKRRIDEINSEL 477
Query: 424 LHALRNSGAENIFEAYCWLQQHRHEL 449
+ G I QQ + E+
Sbjct: 478 NQVMEQLGDARIDRQESSRQQRKAEI 503
Score = 44 (20.5 bits), Expect = 2.4e-10, Sum P(4) = 2.4e-10
Identities = 13/66 (19%), Positives = 32/66 (48%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDMED 418
Y+ D++ + Q+ + N+ ++K KE K + ++K + + + LKD +
Sbjct: 209 YQRLKDEVARAQIQLQLFKLYHNESEIEKLNKELSVKNKGIEKDKKHMDKVEEELKDKKK 268
Query: 419 KNNKLL 424
+ K++
Sbjct: 269 ELGKMM 274
Score = 40 (19.1 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 490 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 550 -ISQFGLDSS 558
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 40 (19.1 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 384 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME------DKNNKLLHALRNSGAENIFE 437
Q + L + +EK +++L S R+ D++ D+ K L N + +FE
Sbjct: 721 QTKTRHLAMNMQEKSKLESELA--NFSPRINDIKRIIQSRDREMKDLKEKMNQVEDEVFE 778
Query: 438 AYC 440
+C
Sbjct: 779 EFC 781
Score = 40 (19.1 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 436
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDYEKNQLKEDQG 833
Query: 437 EAYCWLQQHRHELNK 451
+ W Q + + N+
Sbjct: 834 KVQTWEQSVKKDDNE 848
Score = 37 (18.1 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 391 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
Q+ E E L + L ++ +RL+++ K KL+
Sbjct: 563 QRGEPETFLPLDYLEVKPTDERLREL--KGAKLV 594
>ZFIN|ZDB-GENE-040426-57 [details] [associations]
symbol:smc1al "structural maintenance of chromosomes
1A, like" species:7955 "Danio rerio" [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-040426-57 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000195481
HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
GeneTree:ENSGT00580000081569 EMBL:CR376802 EMBL:CT025883
EMBL:AY648730 IPI:IPI00501499 RefSeq:NP_997975.2 UniGene:Dr.76942
STRING:Q6DRM9 Ensembl:ENSDART00000081016 GeneID:403060
KEGG:dre:403060 CTD:403060 InParanoid:Q6DRM9 OMA:NIGEVAN
NextBio:20816857 Uniprot:Q6DRM9
Length = 1233
Score = 132 (51.5 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 83/387 (21%), Positives = 166/387 (42%)
Query: 652 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 703
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N L
Sbjct: 846 ENEIEKLKKEEQRNMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGGANKEL 905
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
+L + + + + + NLL +CK + + S D I + E N + E
Sbjct: 906 TQLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLRSGTMD-DISQEEGNSQAEE 961
Query: 764 KLALQASLHYEDCKKE--VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
L+ KE +E LS+ + + S E++ E + + E ++
Sbjct: 962 SLSSSQKTSSTVLAKEALIEIDYNSLSEDLKDSLS----DEEIKAEMNTLQQRLNEQQSI 1017
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK----EK 877
+Q IS N +++ E + + ++ S + EA +K K+ + +K ++
Sbjct: 1018 LQ-RISAPN------MKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDR 1070
Query: 878 WLPTLRNLVAQINETF---SRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLE 933
+ ++ I+E + SRN A G + +E D + + K FR L
Sbjct: 1071 FHACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL- 1129
Query: 934 VLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQP 993
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S
Sbjct: 1130 -------SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKDQSVQ 1181
Query: 994 NTPQCFLLTPKLLPDLEYSEACSILNI 1020
N Q +++ L + Y++A S++ +
Sbjct: 1182 NF-QAIVIS---LKEEFYTKADSLIGV 1204
Score = 115 (45.5 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 58/221 (26%), Positives = 98/221 (44%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P + +IGPNGSGKS+L+ AI+ L T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNL-RVKTLKDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + D +E L+ R I + SE+ N KVV + E ++
Sbjct: 66 HGAPVGKPAANRAFVTMVYQQDGGQE-LSFSRII-IGSSSEYRINNKVVGLSDYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ C K +K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GELAQEYDRC----KKEMVKA 178
Query: 196 IECTVKRNGDTLNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E T N + N+ E K+ ++ ++ AE ++++
Sbjct: 179 EEDT------QFNYHRKKNIAAERKEAKQEKEEAERYQRLK 213
Score = 90 (36.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 62/279 (22%), Positives = 123/279 (44%)
Query: 647 EQRLIEDEAAKLQKEREEIINI-VQIEKRKRREMENHINLRKRKLESIEKEDDINTALAK 705
E + ++EA + Q+ ++E++ VQ++ K E+ I R+L KE D + K
Sbjct: 198 EAKQEKEEAERYQRLKDEVVRAHVQLQLFKLYHNESEIEKLNRELAHRNKEIDKDR---K 254
Query: 706 LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 765
+D+ + E+K+ E+ ++ M IE + K ++ E N K+ L
Sbjct: 255 RMDRVEE----------ELKDKKKELGRMM---RDQQM--IEKEIKEKDAELNQKR--PL 297
Query: 766 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 825
++A + K++E RK L +A++ + EL++E + +E E +++
Sbjct: 298 YIKAKENTAHKIKKLEAARKSLQNAQKCYKKRKGDMDELDREQGAVEMARQEFEERMEEE 357
Query: 826 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKW 878
L +N ++ Y HR + E+ S + +EL++F A+ D L + K
Sbjct: 358 AQSQGQDLQLEENQVKAY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKK 414
Query: 879 LPT---LRNLVAQINETFSR--NFQEMAVAGEVSLDEHE 912
+ T ++ + +I E R ++ SLDE +
Sbjct: 415 IETEAKIKQKIREIEENQKRIEKLEDYITTSRQSLDEQK 453
Score = 72 (30.4 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 61/276 (22%), Positives = 116/276 (42%)
Query: 751 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEV---EHCRKHLSDAKRQAESIAFITPEL 804
K R L N+++ KL + A+ D K+ + E K L D E F+ E
Sbjct: 723 KTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSRERDMKDLKDRMNVVEDEVFV--EF 780
Query: 805 EKEF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ-EYEHRQRQIEDLSTKQEADKK 862
KE + EE + Q+ I++ F + L + ++ + Q+++ K ++
Sbjct: 781 CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVVMWEQ 840
Query: 863 ELKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDF--DK 917
+K+ EI+ LK ++ + + +AQ+ + +N Q + EV+ HE + K
Sbjct: 841 TVKKDENEIEKLKKEEQRNMKIIDETMAQLQDL--KN-QHLTKKSEVNDKNHEMEEIRKK 897
Query: 918 FGILIKVKFRQSGQLEVLSAHHQSGGERSVS-TILYLVSLQDLTNCPFRVVDEINQGMDP 976
G K + Q Q EV + + +RS +L +QD+ P R + MD
Sbjct: 898 LGGANK-ELTQL-QKEVTAIETKLEQKRSDRHNLLQACKMQDI-KLPLR-----SGTMDD 949
Query: 977 INERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYS 1012
I++ + Q + S +L + L +++Y+
Sbjct: 950 ISQEEGNSQAEESLSSSQKTSSTVLAKEALIEIDYN 985
Score = 70 (29.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 47/261 (18%), Positives = 107/261 (40%)
Query: 657 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQAADLNI 715
++ K+R+ + + + K K++E+ + ++ + I EK+ ++N L +A +
Sbjct: 248 EIDKDRKRMDRVEEELKDKKKELGRMMRDQQMIEKEIKEKDAELNQK-RPLYIKAKENTA 306
Query: 716 QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-HEKLALQASLHYE 774
+ K + L C Y ++ E D + +E ++ E++ +A +
Sbjct: 307 HKIKKLEAARKSLQNAQKC---YKKRKGDMDELDREQGAVEMARQEFEERMEEEAQSQGQ 363
Query: 775 DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFF 834
D + E + + + ++ A + ELEK + + L+ + I I
Sbjct: 364 DLQLEENQVKAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKIETEAKI-- 421
Query: 835 LNQNI--LQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINET 892
Q I ++E + R ++ED T E KR E+ E+ + + +IN
Sbjct: 422 -KQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEQ----AKRRIDEINME 476
Query: 893 FSRNFQEMAVAGEVSLDEHES 913
++ +++ G+ +D E+
Sbjct: 477 LNQVMEQL---GDARIDRQEN 494
Score = 69 (29.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 52/240 (21%), Positives = 108/240 (45%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA--LAKLVD 708
+E+E +KE ++ Q+ +++ +E + +N +KR L KE NTA + KL
Sbjct: 259 VEEELKDKKKELGRMMRDQQMIEKEIKEKDAELN-QKRPLYIKAKE---NTAHKIKKL-- 312
Query: 709 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRE----------LEFN 758
+AA ++Q + + + ++ + + E MA EF+ ++ E LE N
Sbjct: 313 EAARKSLQNAQKCYKKRKGDMDELDREQGAVE--MARQEFEERMEEEAQSQGQDLQLEEN 370
Query: 759 -LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
+K + +L +AS +E+E K D K + + E E++ +E I++
Sbjct: 371 QVKAYHRLKEEASKRAATLAQELE---KFNRDQKADQDRLDL---E-ERKKIETEAKIKQ 423
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
I++N + + Q + ++R E+L+ + E K+ + E++ + E+
Sbjct: 424 KIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEQAKRRIDEINMELNQVMEQ 483
Score = 67 (28.6 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 35/137 (25%), Positives = 70/137 (51%)
Query: 108 IMRKIDTRNKSEWFFNGKV-VPKGEV-LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK 165
I R I +R + ++ V + EV +E K I V N+ +F +++V +++ +
Sbjct: 751 IKRIIQSRERDMKDLKDRMNVVEDEVFVEFCKE--IGVRNIREF-EEEKVKRQNEIAKKR 807
Query: 166 LLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVR 225
L ET+K QL + L E K+ E TVK++ N+++ L E++++++ +
Sbjct: 808 LEFETQKTRLAIQLDYEKNQLKEDQEKVVMWEQTVKKDE---NEIEKLKKEEQRNMKIID 864
Query: 226 QR-AELLE-KVESMKKK 240
+ A+L + K + + KK
Sbjct: 865 ETMAQLQDLKNQHLTKK 881
Score = 65 (27.9 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 37/182 (20%), Positives = 79/182 (43%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRK------RREMENHINLRKRKLESIEKE---- 696
E++ IE EA QK RE N +IEK + R+ ++ + + E +E+
Sbjct: 411 ERKKIETEAKIKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEQAKRRI 470
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 756
D+IN L ++++Q D I + + + + + + + S K Y + + + +
Sbjct: 471 DEINMELNQVMEQLGDARIDRQENSRQQRKAEI-LESIKRLYPGSVYGRLIDLCQPTQKK 529
Query: 757 FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 816
+ + + L D +K C +++ + + + E+ L ++LE+ T E
Sbjct: 530 YQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETF------LPLDYLEVKPTDE 583
Query: 817 EL 818
+L
Sbjct: 584 KL 585
Score = 60 (26.2 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 25/125 (20%), Positives = 58/125 (46%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES----IEKEDDINTALAKL 706
+ E K ++++ + + +E+RK+ E E I + R++E IEK +D T +
Sbjct: 389 LAQELEKFNRDQKADQDRLDLEERKKIETEAKIKQKIREIEENQKRIEKLEDYITTSRQS 448
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 766
+D+ + ++ +E ++ ++ + + + + DA+I E N +Q K
Sbjct: 449 LDEQKRME-EELTEEVEQAKRRIDEINMELNQVMEQLG----DARIDRQE-NSRQQRKAE 502
Query: 767 LQASL 771
+ S+
Sbjct: 503 ILESI 507
Score = 55 (24.4 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 19/96 (19%), Positives = 47/96 (48%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E +KR L +F +D+ + +L LEE +K + ++ + + E ++
Sbjct: 381 EASKRAATLAQELEKF-NRDQKADQDRLD----LEERKKIETEAKIKQKIREIEENQKRI 435
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE 229
+ +E + + +L++ K + E ++VE+ ++R +
Sbjct: 436 EKLEDYITTSRQSLDEQKRMEEELTEEVEQAKRRID 471
Score = 54 (24.1 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 14/56 (25%), Positives = 31/56 (55%)
Query: 178 QLPVQHCAL-VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE 232
Q +H +L +++ SKL E + G +N +K + +E+D++ ++ R ++E
Sbjct: 721 QTKTRHLSLNMQEKSKL---ESELANFGPRINDIKRIIQSRERDMKDLKDRMNVVE 773
Score = 53 (23.7 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 14/73 (19%), Positives = 42/73 (57%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRR--EMENHINLRKRKLESIEK-EDDINTAL 703
+ RL +E K++ E + I +IE+ ++R ++E++I ++ L+ ++ E+++ +
Sbjct: 404 QDRLDLEERKKIETEAKIKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEV 463
Query: 704 AKLVDQAADLNIQ 716
+ + ++N++
Sbjct: 464 EQAKRRIDEINME 476
Score = 47 (21.6 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 370 KIE---KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 419
KIE K+ +I E ++ NQKR++K E + I T RQ D K ME++
Sbjct: 414 KIETEAKIKQKIRE--IEENQKRIEKLE-DYIT-----TSRQSLDEQKRMEEE 458
Score = 41 (19.5 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 510 VSNESSRKEPF--QISEEMRALGISARLDQVFDAPHAVKEVL-ISQFGLDSS 558
V RKE ++ E+M+A A L QV H ++ L SQ L+ +
Sbjct: 671 VDKLKDRKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 5.5e-10, Sum P(3) = 5.5e-10
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL---RNSGAENIF 436
E+GV + +++ E+EK+ QN++ + RL + E + +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFETQKTRLAIQLDYEKNQLKEDQE 833
Query: 437 EAYCWLQQHRHELNK 451
+ W Q + + N+
Sbjct: 834 KVVMWEQTVKKDENE 848
>WB|WBGene00001860 [details] [associations]
symbol:him-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=ISS] [GO:0007059 "chromosome
segregation" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0010165 "response to X-ray" evidence=IMP]
[GO:0009411 "response to UV" evidence=IMP] [GO:0008278 "cohesin
complex" evidence=ISS;IPI] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0009411 GO:GO:0002119 GO:GO:0003677
GO:GO:0006281 GO:GO:0040011 GO:GO:0000790 GO:GO:0006310
GO:GO:0040035 GO:GO:0030261 GO:GO:0010165 GO:GO:0007064
GO:GO:0008278 eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000195481
KO:K06636 OMA:NALVCET GeneTree:ENSGT00580000081569 EMBL:FO081198
RefSeq:NP_001040658.2 UniGene:Cel.5375 ProteinModelPortal:O01789
SMR:O01789 STRING:O01789 PaxDb:O01789 EnsemblMetazoa:F28B3.7a.1
EnsemblMetazoa:F28B3.7a.2 GeneID:172116 KEGG:cel:CELE_F28B3.7
UCSC:F28B3.7a.1 CTD:172116 WormBase:F28B3.7a InParanoid:O01789
NextBio:874073 ArrayExpress:O01789 Uniprot:O01789
Length = 1262
Score = 122 (48.0 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 82/403 (20%), Positives = 173/403 (42%)
Query: 646 TEQ---RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
TEQ R +E E K+ + + ++ + EK ++ H ++ E +E++ ++
Sbjct: 841 TEQDGNRKVEVEKEKVSQIDRQYKDMKKKEKTAAAALKEHTESMEQDKEVLEEKKALSHK 900
Query: 703 LA---KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKH--MASIEF--------D 749
L V + A + ++ F A E + L +E + K Y E+H + S++
Sbjct: 901 LETEWNEVKKIAQVAMKDFTKA-EKELLRLESLLTKKQY-ERHSLLHSVKLGQIALPLKS 958
Query: 750 AKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE-- 807
+ ++E+ + A Q+S D E + K +S+ +++ +
Sbjct: 959 GSMADVEYEEDDGDDTASQSSQSATDGPSVSEEQIQREQHIKINYDSLPREYKDVDDDDG 1018
Query: 808 FLEMPTTIE-ELEAAIQDNISQANSIFF-LNQNILQEYEHRQRQIEDLSTKQEADKKELK 865
+M + E++ +Q N+S+ N+ NQ + + E E+L ++ K+ +
Sbjct: 1019 VRQMSNRLNVEIDE-LQKNVSKMNAPNLKANQRMAEVKEREAESTEELENARKKAKRIRQ 1077
Query: 866 RF-LAEIDALK--EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILI 922
+F + D + + + + N + I + SRN A G +++E D ++ +
Sbjct: 1078 QFEKVKTDRYRRFQDFFDPVANTIDDIYKQLSRNTSAQAFLGADNMEEPYLDGIQYNCVA 1137
Query: 923 KVK-FRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERK 981
K FR L SGGE++++ + L ++ PF V+DEI+ +D N K
Sbjct: 1138 PGKRFRPMDNL--------SGGEKTIAALALLFAVHGRNPAPFFVLDEIDAALDNTNIGK 1189
Query: 982 MFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1024
+ + +A + Q +++ L + Y++A S++ I P
Sbjct: 1190 VASYICESAREHM--QIIVIS---LKEEFYNKADSLIGIFPYP 1227
Score = 110 (43.8 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 58/230 (25%), Positives = 103/230 (44%)
Query: 21 GNIIEIELHNFMTFD--HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGD-TQLLGR- 76
G + +E+ NF ++ H I P +R +IGPNGSGKS+L+ AI+ LG + L R
Sbjct: 14 GTLHTLEIENFKSYKGKHTI-GPFTRFTAIIGPNGSGKSNLMDAISFVLGEKPSSLRVRK 72
Query: 77 -ATSI-GAYVKRG-EESGYIKISLR-GDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEV 132
A I GA + + + + ++ + D K + T R ++ SE +G+ V
Sbjct: 73 YADLIHGAPINKPVAKKCRVTMNYKYSDGKVKAFT--RGVNN-GTSEHLLDGQTVTSAAY 129
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + NI + + Q + A +P + + E+ + ++ +
Sbjct: 130 SQEMESINIFIKARNFLVYQGAIENIAMKTPKERTQLFEELSRSHEFQAEY-------ER 182
Query: 193 LKTIECTVKRNGDTLNQL-KALNVEQEKDVERVRQRAELLEKVESMKKKL 241
LK +E T K DT + + K + QEK + + EK ++MK +L
Sbjct: 183 LK-VEMT-KAEDDTQHNMNKRRGIAQEK--REAKMEKDEAEKYQTMKNEL 228
Score = 76 (31.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 50/251 (19%), Positives = 111/251 (44%)
Query: 647 EQRLIEDEAAKLQKEREEI------INIVQIEKRKRR--EMENHINLRKRKLESIE---K 695
E ++ +DEA K Q + E+ + + Q+ +R E + IN +K+ + S+E
Sbjct: 210 EAKMEKDEAEKYQTMKNELAAKSTMLFLHQLFHCERTIDESKEEINAQKKTIASLEATRS 269
Query: 696 EDDINTALAKLVDQAADLNIQQFKYAIEIKNL-LVE----IVSCKWSYAEKHMASIEFDA 750
+++ A + A +Q+ ++ K L E +++ K S A +H +E
Sbjct: 270 KEEAKIAAVHQEHRKALREVQKMTRKLDQKETDLAEKQQNMLTLKVSVAHEHK-KLEIAK 328
Query: 751 KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRK----HLSDAKRQAESIAFITPELEK 806
K+ + ++ L A L + KKE+E + + D ++ E ++ E +
Sbjct: 329 KMLAAAESKAENNSTQL-ADL--KKSKKELEKKKAAYEAEIQDMMQRGE--LNLSDEQVR 383
Query: 807 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
E+ ++ + A +Q + A +F +++ L RQ++ ++ +E D + ++
Sbjct: 384 EYGQLKDQAQRESAMVQRELLMAEQVFEGDKSSLNHELRRQKEHQERVKAKEGDVRRIET 443
Query: 867 FLAEI-DALKE 876
+A + +KE
Sbjct: 444 QIATLAQRIKE 454
Score = 62 (26.9 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 60/318 (18%), Positives = 139/318 (43%)
Query: 652 EDEAAKLQKEREEIIN--IVQIEKRKRREME-----NHINLRKRKLESIEKEDDINTALA 704
+++ K +E+ +N I ++K +RRE+E + IN +++L +++ D+ +
Sbjct: 683 DEKVVKQLREKRNQLNEKIADLQKHRRRELEVESVRSKINGNEQRLAMMKR--DLKN-MR 739
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSC--KWSYAEKHMASIEFDAKIRELEFNLKQH 762
++ Q L + E+ L I +C K +E + S++ K E+ +
Sbjct: 740 EM--QLERLQNELEGMTAEMNMLPPRISNCQEKLERSESTLKSLQ--TKSNEVADRIFAD 795
Query: 763 --EKLALQASLHYED----CKKEVEH-CRKHLSDAKRQAESIAFITPELEKEFLEMPTT- 814
++ + + YE+ K+E+E R D ++ A I F+T + +E+
Sbjct: 796 FCTRVGIASIRDYENREMRIKQEMEDKLRSFDDDIQKLAYEIDFVTEQDGNRKVEVEKEK 855
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIED---LSTKQEADKKELKRFLAEI 871
+ +++ +D + + + + E + +E+ LS K E + E+K+ +A++
Sbjct: 856 VSQIDRQYKDMKKKEKTAAAALKEHTESMEQDKEVLEEKKALSHKLETEWNEVKK-IAQV 914
Query: 872 DALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQ 931
A+K+ + + L+ + + ++ ++ V L + K G + V++ +
Sbjct: 915 -AMKD-FTKAEKELLRLESLLTKKQYERHSLLHSVKLGQIALPL-KSGSMADVEYEEDDG 971
Query: 932 LEVLSAHHQSGGER-SVS 948
+ S QS + SVS
Sbjct: 972 DDTASQSSQSATDGPSVS 989
Score = 58 (25.5 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 30/115 (26%), Positives = 52/115 (45%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLR-QCSDRLKDMEDKNNKLLHA 426
H + K ++ ++ + +QK +EK+ QN LTL+ + K +E K+L A
Sbjct: 279 HQEHRKALREVQKMTRKLDQKETDLAEKQ----QNMLTLKVSVAHEHKKLEIAK-KML-A 332
Query: 427 LRNSGAENIFEAYCWLQQHRHELNKE--AYGPVLLEVNVSNRAHANYLEDHVGHY 479
S AEN L++ + EL K+ AY + ++ R N ++ V Y
Sbjct: 333 AAESKAENNSTQLADLKKSKKELEKKKAAYEAEIQDM--MQRGELNLSDEQVREY 385
Score = 42 (19.8 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 391 QKSEK--EKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
QKS+K EK++ Q + Q ++++ D++ + L
Sbjct: 677 QKSKKWDEKVVKQLREKRNQLNEKIADLQKHRRREL 712
>UNIPROTKB|E2QV07 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes
protein" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 CTD:8243 KO:K06636 OMA:NALVCET
GeneTree:ENSGT00580000081569 EMBL:AAEX03026385 RefSeq:XP_538049.3
Ensembl:ENSCAFT00000025795 GeneID:480928 KEGG:cfa:480928
Uniprot:E2QV07
Length = 1233
Score = 124 (48.7 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 80/384 (20%), Positives = 166/384 (43%)
Query: 652 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 703
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
L + + + + + NLL +CK + ++ D I + E + + +
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGSSQGED 961
Query: 764 KLA---LQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
++ +S++ + E+++ C + L DA+ + E I L+++ E + ++
Sbjct: 962 SVSGSQRTSSIYAREALIEIDYGDLC-EDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQR 1019
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+ A + + S+ Q E+E +++ + E KKE RF D
Sbjct: 1020 IAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNAC 1073
Query: 878 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLS 936
+ N + +I + SRN A G + +E D + + K FR L
Sbjct: 1074 FESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL---- 1128
Query: 937 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 996
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N
Sbjct: 1129 ----SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF- 1182
Query: 997 QCFLLTPKLLPDLEYSEACSILNI 1020
Q +++ L + Y++A S++ +
Sbjct: 1183 QAIVIS---LKEEFYTKAESLIGV 1203
Score = 122 (48.0 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ A+ ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLK 213
Score = 98 (39.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 57/271 (21%), Positives = 118/271 (43%)
Query: 655 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 713
AA+ ++ ++E + ++ K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 714 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 773
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 774 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 833
+ K++E +K L +A++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 834 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 883
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 884 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 912
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 90 (36.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 770
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 771 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 826
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 827 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 913
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 86 (35.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 55/261 (21%), Positives = 118/261 (45%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 711 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 763
L Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 764 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 815
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 874
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 875 KEKWLPTLRNLVAQINETFSR 895
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 70 (29.7 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 649 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 705
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 706 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 744
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 745 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 801
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 802 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 861
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 862 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 921
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 922 IKVKFRQSGQLEVLSAHH 939
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 751 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 806
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 807 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 863
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 864 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 914
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 62 (26.9 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 134 EITKRF--NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
E+ + F I V N+ +F +++V +++ +L E +K QL + L E
Sbjct: 775 EVFEEFCREIGVRNIREF-EEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K+ E TVK++ + + +LK K ++ + + L+ KK
Sbjct: 834 KVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKK 881
Score = 59 (25.8 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 30/130 (23%), Positives = 56/130 (43%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E +SK K IE KR ++LK E++K++ ++ + + +EK +K+K L +
Sbjct: 241 ELASKNKEIEKDKKRMDKVEDELK----EKKKELGKMMREQQQIEK--EIKEKDSEL--N 292
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
K+ +YI +L K + +K GD +L + K
Sbjct: 293 QKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRK-------GDMDELEKEMLSVEK 345
Query: 308 RRMDFLEKVD 317
R +F E+++
Sbjct: 346 ARQEFEERME 355
Score = 57 (25.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 21/100 (21%), Positives = 47/100 (47%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E +KR L +F +D+ + +L LEE +K + ++ + + E ++
Sbjct: 381 EASKRAATLAQELEKF-NRDQKADQDRLD----LEERKKVETEAKIKQKLREIEENQKRI 435
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK 233
+ +E + + +L + K L E ++VE ++R + + K
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 44 (20.5 bits), Expect = 6.4e-10, Sum P(4) = 6.4e-10
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 383 VQANQKRLQKSE------KEKILNQNKLT--LRQCSDRLKDMEDKNNKLLH-ALRNSGAE 433
++ NQKR++K E K+ + Q KL L + + K D+ NK L+ + G
Sbjct: 428 IEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDA 487
Query: 434 NIFEAYCWLQQHRHEL 449
I QQ + E+
Sbjct: 488 RIDRQESSRQQRKAEI 503
Score = 44 (20.5 bits), Expect = 6.4e-10, Sum P(4) = 6.4e-10
Identities = 20/93 (21%), Positives = 41/93 (44%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDMED 418
Y+ D++ + Q+ + N+ ++K KE K + ++K + + D LK+ +
Sbjct: 209 YQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Query: 419 KNNKLLHALRNSGAENIFEAYCWLQQHRHELNK 451
+ K++ + E I E L Q R + K
Sbjct: 269 ELGKMMREQQQIEKE-IKEKDSELNQKRPQYIK 300
Score = 43 (20.2 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 436
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 437 EAYCWLQQHRHELNK 451
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 41 (19.5 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 76 RATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
R + Y+ ++S + L G+ EE R+ID NK
Sbjct: 434 RIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 40 (19.1 bits), Expect = 6.4e-10, Sum P(4) = 6.4e-10
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 490 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 550 -ISQFGLDSS 558
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 7.4e-10, Sum P(3) = 7.4e-10
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 428 RNSGAENIFEAYC 440
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
Score = 37 (18.1 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS---DRLKDMEDKNNKLL 424
+Q LG+Q + ++ Q E + ++ + T+++ ++LK E ++ K++
Sbjct: 812 NQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKII 863
>CGD|CAL0000340 [details] [associations]
symbol:SMC2 species:5476 "Candida albicans" [GO:0003680 "AT
DNA binding" evidence=IEA] [GO:0000217 "DNA secondary structure
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0000939 "condensed chromosome inner kinetochore" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000799 "nuclear condensin complex" evidence=IEA]
[GO:0070058 "tRNA gene clustering" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0000340
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 EMBL:AACQ01000103 EMBL:AACQ01000102
KO:K06674 PANTHER:PTHR18937:SF9 RefSeq:XP_714465.1
RefSeq:XP_714514.1 ProteinModelPortal:Q59Y26 STRING:Q59Y26
GeneID:3643867 GeneID:3643918 KEGG:cal:CaO19.11106
KEGG:cal:CaO19.3623 Uniprot:Q59Y26
Length = 1171
Score = 128 (50.1 bits), Expect = 4.8e-10, Sum P(3) = 4.8e-10
Identities = 67/338 (19%), Positives = 148/338 (43%)
Query: 653 DEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDINT---ALAKLVD 708
D+ +K+ ++E+ ++ Q K +++EN + + +++S + + ++ AL +
Sbjct: 789 DKGSKINCLKKEVAHLKQQVISKEKQLENQTDKFQAAQIDSEQLKIELQNKQEALISTKN 848
Query: 709 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI-EFDAKIRELEFNLK-QHEKLA 766
Q +L + K + K L+E ++ S + A++ D +I EL +K + EK+
Sbjct: 849 QIDELT-HKIKQQDQTKEQLIEQLTLVKSELDDARANLLGLDEEITELTNIVKLKIEKMT 907
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIA-----FITPELEKEFLEMPTTIEELEAA 821
+ L + E+E + + K + + I + ++ ++ I+ E
Sbjct: 908 M-TKLDIQKLTHELEKSQNVTKNLKTRLDEIISEHEWVMDNQMVNNIMDQYPNIDIEETR 966
Query: 822 IQDNISQANSIFF---LNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
Q + Q +N NI+ E+ +++ L T + +K+ + + I+ L
Sbjct: 967 EQWELLQEKFSSMRRKVNVNIMSMIENVEKKETSLKTMVKTIEKDKNKIVNTINKLNGYK 1026
Query: 879 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES-DFDKFGILIKVKFRQSGQLEVLSA 937
TL ++++ F F ++ L + D K G+ +KVK GQ+ S
Sbjct: 1027 RDTLNTTYQKVSKDFGAIFADLLPGSFAKLVPIDMMDVTK-GLEVKVKL---GQVWKESL 1082
Query: 938 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
SGG+RS+ + +++L P ++DE++ +D
Sbjct: 1083 VELSGGQRSLIALSLIMALLQFKPAPMYILDEVDAALD 1120
Score = 110 (43.8 bits), Expect = 4.8e-10, Sum P(3) = 4.8e-10
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 43 SRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYV-KRGEESGYIKISL---- 97
++ N + G NGSGKS+++ AI LG + RA+++ + KRG+ +G K S+
Sbjct: 25 AQFNAITGLNGSGKSNILDAICFVLGIASMSTVRASNLQDLIYKRGQ-AGVTKASVTIVF 83
Query: 98 -RGDTKE-----EH---LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQ 148
+ + E+ +++ R+I S++ NG + VL + + + +NN
Sbjct: 84 NNSEVSKSPIGFENCPTISVTRQIILGGTSKYLINGHKAQQQTVLNLFQSVQLNINNPNF 143
Query: 149 FLPQDRVCEFAKLSPVKLLEETEKAVG 175
+ Q ++ + + P ++L E+A G
Sbjct: 144 LIMQGKITKVLNMKPSEILSLIEEAAG 170
Score = 92 (37.4 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 44/212 (20%), Positives = 98/212 (46%)
Query: 713 LNIQQF-KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL 771
L +QQ+ K I++K + E+ + K + M S+ + + E NLK+HE L+ L
Sbjct: 679 LKLQQYNKLTIQLKKIEFELQNVKQELSR--MDSLISSTRTIQNEINLKRHELSLLEKKL 736
Query: 772 HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ-DNISQAN 830
++ + + R E I IT E +++ + IE+ A D S+ N
Sbjct: 737 ENNPAALILKQNDLNQQEIIRLTEEIE-ITKEKCRQYKQEIAIIEKDIAEFNNDKGSKIN 795
Query: 831 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQIN 890
+ ++ Q+ +++Q+E+ + K +A + + ++ E+ +E + T +N + ++
Sbjct: 796 CLKKEVAHLKQQVISKEKQLENQTDKFQAAQIDSEQLKIELQNKQEALIST-KNQIDELT 854
Query: 891 ETFSRNFQ-EMAVAGEVSLDEHESDFDKFGIL 921
+ Q + + +++L + E D + +L
Sbjct: 855 HKIKQQDQTKEQLIEQLTLVKSELDDARANLL 886
Score = 77 (32.2 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 42/235 (17%), Positives = 101/235 (42%)
Query: 683 INLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKH 742
+N++ ++ S+ +E + D+A ++ EI+NLL E + K
Sbjct: 154 LNMKPSEILSLIEEAAGTRTFEERKDKAQKTMAKKEAKLTEIRNLLSEEIEPKLEKLRNE 213
Query: 743 MAS-IEFDAKIRELEFNLKQHEKLA-LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFI 800
+ +EF ++ + +L EKL+ + A+ Y K H K L+D + + ++
Sbjct: 214 KRNFLEF----QQTQIDL---EKLSRIIAACDYTLLSKNFTHHSKFLNDHETKMNNLHLE 266
Query: 801 TPELEKEFLEMPTTIEELEAAIQDNISQANSI--FFLNQNILQEYEHRQRQIEDLSTKQE 858
+L E + ++++++ ++N+ S+ + +N L R D++
Sbjct: 267 VDKLNHEIKNLNEDLDQVKSRKEENLKTDGSMKELEIKENQLSNDLTRLNTARDIAMDNL 326
Query: 859 ADKKELK-RFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHE 912
++K + + +++ +K++ Q NE + ++ QE+ E ++ E
Sbjct: 327 TEEKNKHTKLIEQLEQIKQQLASNQTVFDNQENE-YKQSNQELVQLKEEYANKQE 380
Score = 77 (32.2 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 67/304 (22%), Positives = 128/304 (42%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIE-KEDDINTALA 704
E+R +D+A K ++E + +I E+E + LR K +E ++ I+
Sbjct: 175 EER--KDKAQKTMAKKEA--KLTEIRNLLSEEIEPKLEKLRNEKRNFLEFQQTQIDLEKL 230
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 764
+ A D + + K L K + H+ + + +I+ L +L Q K
Sbjct: 231 SRIIAACDYTLLSKNFTHHSKFLNDH--ETKMN--NLHLEVDKLNHEIKNLNEDLDQ-VK 285
Query: 765 LALQASLHYEDCKKEVEHCRKHLS-DAKR--QAESIAF--ITPELEK--EFLEMPTTIEE 817
+ +L + KE+E LS D R A IA +T E K + +E I++
Sbjct: 286 SRKEENLKTDGSMKELEIKENQLSNDLTRLNTARDIAMDNLTEEKNKHTKLIEQLEQIKQ 345
Query: 818 LEAAIQDNI-SQANSIFFLNQNILQ---EYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 873
A+ Q +Q N NQ ++Q EY ++Q + LST + + +++
Sbjct: 346 QLASNQTVFDNQENEYKQSNQELVQLKEEYANKQELLSTLSTGISSTGNVTSGYTTQLND 405
Query: 874 LKEKWLPTLRNLVAQINETFSRN-FQEMAVAGEVSLDEHESDFDKFGILIKV--KFRQSG 930
+K K L N + T N Q+ + ++ L + +++ + I++ +F ++
Sbjct: 406 VKSK-LNASENFIK--TSTLKINHLQQQMESDQMKLTKAKTENETLLSAIELHRQFIKTK 462
Query: 931 QLEV 934
QLE+
Sbjct: 463 QLEI 466
Score = 73 (30.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 40/210 (19%), Positives = 85/210 (40%)
Query: 106 LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK 165
+++ R+I S++ NG + VL + + + +NN + Q ++ + + P +
Sbjct: 101 ISVTRQIILGGTSKYLINGHKAQQQTVLNLFQSVQLNINNPNFLIMQGKITKVLNMKPSE 160
Query: 166 LLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRN--GDTLN-QLKALNVEQEKDVE 222
+L E+A G + +K+ K + T RN + + +L+ L E+ +E
Sbjct: 161 ILSLIEEAAGTRTFE-ERKDKAQKTMAKKEAKLTEIRNLLSEEIEPKLEKLRNEKRNFLE 219
Query: 223 RVRQRAELLEKVESMKKKLPWL---KYDMKKAEYIXXXXXXXXXXXXXXXXXN----TLH 275
+ + +L EK+ + + K ++++ N L+
Sbjct: 220 FQQTQIDL-EKLSRIIAACDYTLLSKNFTHHSKFLNDHETKMNNLHLEVDKLNHEIKNLN 278
Query: 276 EFSKPIEGKKQEKAILDGDCKKLSSLINEN 305
E ++ +K+E DG K+L I EN
Sbjct: 279 EDLDQVKSRKEENLKTDGSMKELE--IKEN 306
Score = 73 (30.8 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 40/173 (23%), Positives = 78/173 (45%)
Query: 657 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQ 716
+LQ ++E+ + + R ++N INL++ +L +EK+ + N A L+ + DLN Q
Sbjct: 697 ELQNVKQELSRMDSLIS-STRTIQNEINLKRHELSLLEKKLENNPAA--LILKQNDLNQQ 753
Query: 717 QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL-ALQASL-HYE 774
+ E +EI K ++ +A IE D EFN + K+ L+ + H +
Sbjct: 754 EIIRLTEE----IEITKEKCRQYKQEIAIIEKDIA----EFNNDKGSKINCLKKEVAHLK 805
Query: 775 DC----KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
+K++E+ A+ +E + ++ + I+EL I+
Sbjct: 806 QQVISKEKQLENQTDKFQAAQIDSEQLKIELQNKQEALISTKNQIDELTHKIK 858
Score = 49 (22.3 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 22/105 (20%), Positives = 48/105 (45%)
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
L+ + IQ+ + +F Q+ E +++ L+ T + L +L+EK +
Sbjct: 681 LQQYNKLTIQLKKI-EFELQNVKQELSRMD--SLISSTRTIQNEINLKRHELSLLEKKLE 737
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDV--ERVRQRAELLEKVE 235
+K+N LNQ + + + +E ++ E+ RQ + + +E
Sbjct: 738 NNPAALILKQND--LNQQEIIRLTEEIEITKEKCRQYKQEIAIIE 780
Score = 48 (22.0 bits), Expect = 4.8e-10, Sum P(3) = 4.8e-10
Identities = 14/70 (20%), Positives = 36/70 (51%)
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLK-ALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
++ +K +E + + L +L A ++ + E + +L+E++E +K++L +
Sbjct: 292 LKTDGSMKELEIKENQLSNDLTRLNTARDIAMDNLTEEKNKHTKLIEQLEQIKQQLASNQ 351
Query: 246 --YDMKKAEY 253
+D ++ EY
Sbjct: 352 TVFDNQENEY 361
Score = 41 (19.5 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
H +++KL +I L +Q KS KE+ L + +K++E K N+L + L
Sbjct: 264 HLEVDKLNHEIKNLNEDLDQV---KSRKEENLKTD--------GSMKELEIKENQLSNDL 312
Query: 428 -RNSGAENI 435
R + A +I
Sbjct: 313 TRLNTARDI 321
>UNIPROTKB|E1BMZ9 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051383 "kinetochore organization" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045132
"meiotic chromosome segregation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 OMA:IAIEFLT
EMBL:DAAA02002417 EMBL:DAAA02002418 IPI:IPI00703154
Ensembl:ENSBTAT00000007705 ArrayExpress:E1BMZ9 Uniprot:E1BMZ9
Length = 1288
Score = 148 (57.2 bits), Expect = 5.5e-10, Sum P(3) = 5.5e-10
Identities = 72/344 (20%), Positives = 154/344 (44%)
Query: 652 EDEAAKLQKEREEIINIV---QIE----KRKRREMENHINLRKRKLESIEKE-DDINTAL 703
+D+ K+ K+ +E + + Q+ R ++ ++++ +++++ EKE DD+ T L
Sbjct: 903 QDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDNVLRTEKEIKDTEKEVDDLTTEL 962
Query: 704 AKLVDQAADL--NIQQFKYAI-EI----KNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 756
L D+AA++ N + ++ EI +NLL E+ + + ++ K+ +++
Sbjct: 963 KSLEDKAAEVVKNTNDAEASLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQID 1022
Query: 757 FNLKQHEKLALQASLHYEDCKKEVEHCRKH-LSDAKRQAESIAFITPELEKEFLEMPTTI 815
++ +H + + Y ++E+ H + D E I ++PE E E ++ P +I
Sbjct: 1023 GHIGEHN-----SKIKY--WQREISKISLHPIED--NHVEKIPVLSPE-ELEAIKNPDSI 1072
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK--KELKRFLAEIDA 873
A ++ + N + +Y+ ++ L E DK E F +
Sbjct: 1073 TNQIAVLEAQCHEMKP----NLGAIADYKKKEELY--LQRVAELDKITNERDNFRQAYED 1126
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQ 931
L+++ L I N+Q + + G+ LD +S D F GI V+ +
Sbjct: 1127 LRKQRLNEFMAGFYIITNKLKENYQMLTLGGDAELDLVDS-MDPFSEGITFSVRPPKKSW 1185
Query: 932 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
++ + SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1186 KKIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1226
Score = 92 (37.4 bits), Expect = 5.5e-10, Sum P(3) = 5.5e-10
Identities = 51/216 (23%), Positives = 89/216 (41%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 142
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E I+ I GD E + + R N S + +GK
Sbjct: 143 SVLIHNSDEHKDIQSCTVAVHFQKIIDKEGDDYEVIPNSNFYVSRTAYRDNTSVYHVSGK 202
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P E E + + +
Sbjct: 203 KTTFKDVGILLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSGR 262
Query: 186 LVEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKD 220
L E L + +E + G+ LN++K VE+EKD
Sbjct: 263 LNEPIKVLCRRVEILNEHRGEKLNRVKM--VEKEKD 296
Score = 81 (33.6 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 33/150 (22%), Positives = 74/150 (49%)
Query: 646 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAK 705
T+ +E E +KE E++ ++ K++ ++++ R+++L K +N A +K
Sbjct: 444 TKNNALEKEK---EKEEEKLKEVMDSLKQETQDLQKEKESREKELMDFSKS--VNEARSK 498
Query: 706 L-VDQAA-DLNIQQFKYAI-EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
+ V Q+ D+ +++ A+ ++ +++ + E+ A + +AK+ + E LK+
Sbjct: 499 MDVAQSELDIYLRRHNTAVSQLGKAKEALMAASETLKERKAAIGDIEAKLPQTEHELKEK 558
Query: 763 EKLALQASLHYE-DCKKEVEHCRKHLSDAK 791
EK LQ E + K V + + +AK
Sbjct: 559 EK-ELQKLTQEEINFKSLVRDLFQKVEEAK 587
Score = 79 (32.9 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 53/235 (22%), Positives = 91/235 (38%)
Query: 99 GDTKEEHLTIMRKIDTRN--KSEWFFNGKVVPKG-EVLEITKRFNIQVNNLTQ--FLPQD 153
G E + R+++ N + E K+V K + LE K I+ L F ++
Sbjct: 261 GRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFRKKN 320
Query: 154 RVCEFAKLSPVKLLEETE---KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
VC++ K + E E + + + + + + S+++K VK LN++
Sbjct: 321 HVCQYYIYDLQKRIAEMETQKEKINEDTKEINEKSNI-LSNEMKAKNKAVKDVEKKLNKI 379
Query: 211 -KALNVEQEK----DVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXX 265
K + +EK D+E V+ R +L KK L+ D +K E
Sbjct: 380 TKFIEENKEKFTKLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPTKSENII 439
Query: 266 XXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRR---MDFLEKVD 317
N E K E +K K ++D ++ L E R MDF + V+
Sbjct: 440 RETTTKNNALEKEKEKEEEKL-KEVMDSLKQETQDLQKEKESREKELMDFSKSVN 493
Score = 68 (29.0 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 51/237 (21%), Positives = 97/237 (40%)
Query: 769 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFL-------EMPTTIEELEAA 821
+S+ E ++EV L ++A I +LE+ L EM T+E+ A+
Sbjct: 765 SSVVVEISEEEVNKMESQLQRDSQKAVQIQEQKVQLEEAILRLRHSEREMRNTLEKFSAS 824
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW--- 878
IQ +S+ +LN + + + + D +Q+ ++ + F E +++ E+
Sbjct: 825 IQ-RLSEQEE--YLNVQVKELEANVLATVPD-KKQQKVLEENVNTFKTEYNSVAERAGKV 880
Query: 879 ---LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFR--QSGQLE 933
+ L N++ +IN + Q+ LDE S K + IK R + Q
Sbjct: 881 EAEVKRLHNIIVEINNHKLKAQQDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDN 940
Query: 934 VLSAHHQ-SGGERSVSTILY-LVSLQDLTNCPFRVVDEINQGMDPINE--RKMFQQL 986
VL + E+ V + L SL+D + ++ + I + R + Q+L
Sbjct: 941 VLRTEKEIKDTEKEVDDLTTELKSLEDKAAEVVKNTNDAEASLPEIQKEHRNLLQEL 997
Score = 46 (21.3 bits), Expect = 5.5e-10, Sum P(3) = 5.5e-10
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 371 IEKLGSQILELGVQA---NQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
I L +I E+ Q N+ + +EK IL+ N++ + + +KD+E K NK+
Sbjct: 327 IYDLQKRIAEMETQKEKINEDTKEINEKSNILS-NEMKAK--NKAVKDVEKKLNKI 379
Score = 45 (20.9 bits), Expect = 7.0e-10, Sum P(3) = 7.0e-10
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 272 NTLHEFSKPIEGKKQEKAILDGDCKKLSS--LINENSKRRMDFLEK 315
NTL +FS I+ +++ L+ K+L + L K++ LE+
Sbjct: 816 NTLEKFSASIQRLSEQEEYLNVQVKELEANVLATVPDKKQQKVLEE 861
Score = 40 (19.1 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 24/110 (21%), Positives = 45/110 (40%)
Query: 377 QILELGVQANQKRLQK-SEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENI 435
+I E V + +LQ+ S+K + + K+ L + RL+ E + L ++ + +
Sbjct: 770 EISEEEVNKMESQLQRDSQKAVQIQEQKVQLEEAILRLRHSEREMRNTLEKF-SASIQRL 828
Query: 436 FEAYCWLQQHRHELNKEAYGPV-------LLEVNVSN-RAHANYLEDHVG 477
E +L EL V +LE NV+ + N + + G
Sbjct: 829 SEQEEYLNVQVKELEANVLATVPDKKQQKVLEENVNTFKTEYNSVAERAG 878
>UNIPROTKB|O97593 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9913 "Bos taurus" [GO:0030893 "meiotic cohesin complex"
evidence=ISS] [GO:0007126 "meiosis" evidence=ISS] [GO:0009314
"response to radiation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0000776 "kinetochore" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0000075 "cell cycle
checkpoint" evidence=ISS] [GO:0042770 "signal transduction in
response to DNA damage" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0036033 "mediator
complex binding" evidence=IEA] [GO:0032876 "negative regulation of
DNA endoreduplication" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 GO:GO:0005737 GO:GO:0000776 GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0003682 GO:GO:0042770
GO:GO:0006310 GO:GO:0030261 GO:GO:0009314 GO:GO:0032876
GO:GO:0000075 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0030893 EMBL:AF072712 IPI:IPI00687474 PIR:S71602
RefSeq:NP_777039.1 UniGene:Bt.109789 ProteinModelPortal:O97593
STRING:O97593 PRIDE:O97593 GeneID:282370 KEGG:bta:282370 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 InParanoid:O97593 KO:K06636
OrthoDB:EOG4HX507 NextBio:20806162 Uniprot:O97593
Length = 1233
Score = 122 (48.0 bits), Expect = 5.9e-10, Sum P(3) = 5.9e-10
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ A+ ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLK 213
Score = 121 (47.7 bits), Expect = 5.9e-10, Sum P(3) = 5.9e-10
Identities = 79/384 (20%), Positives = 166/384 (43%)
Query: 652 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 703
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
L + + + + + NLL +CK + ++ D I + E + + +
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGSSQGED 961
Query: 764 KLA---LQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
++ ++++ + E+++ C + L DA+ + E I L+++ E + ++
Sbjct: 962 SVSGSQRTSNIYAREALIEIDYGDLC-EDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQR 1019
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+ A + + S+ Q E+E +++ + E KKE RF D
Sbjct: 1020 IAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNAC 1073
Query: 878 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLS 936
+ N + +I + SRN A G + +E D + + K FR L
Sbjct: 1074 FESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL---- 1128
Query: 937 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 996
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N
Sbjct: 1129 ----SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF- 1182
Query: 997 QCFLLTPKLLPDLEYSEACSILNI 1020
Q +++ L + Y++A S++ +
Sbjct: 1183 QAIVIS---LKEEFYTKAESLIGV 1203
Score = 98 (39.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 57/271 (21%), Positives = 118/271 (43%)
Query: 655 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 713
AA+ ++ ++E + ++ K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 714 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 773
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 774 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 833
+ K++E +K L +A++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 834 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 883
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 884 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 912
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 90 (36.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 770
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 771 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 826
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 827 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 913
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 86 (35.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 55/261 (21%), Positives = 118/261 (45%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 711 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 763
L Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 764 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 815
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 874
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 875 KEKWLPTLRNLVAQINETFSR 895
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 70 (29.7 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 649 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 705
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 706 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 744
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 745 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 801
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 802 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 861
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 862 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 921
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 922 IKVKFRQSGQLEVLSAHH 939
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 751 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 806
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 807 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 863
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 864 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 914
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 62 (26.9 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 134 EITKRF--NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
E+ + F I V N+ +F +++V +++ +L E +K QL + L E
Sbjct: 775 EVFEEFCREIGVRNIREF-EEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K+ E TVK++ + + +LK K ++ + + L+ KK
Sbjct: 834 KVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKK 881
Score = 44 (20.5 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 383 VQANQKRLQKSE------KEKILNQNKLT--LRQCSDRLKDMEDKNNKLLH-ALRNSGAE 433
++ NQKR++K E K+ + Q KL L + + K D+ NK L+ + G
Sbjct: 428 IEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDA 487
Query: 434 NIFEAYCWLQQHRHEL 449
I QQ + E+
Sbjct: 488 RIDRQESSRQQRKAEI 503
Score = 44 (20.5 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 20/93 (21%), Positives = 41/93 (44%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDMED 418
Y+ D++ + Q+ + N+ ++K KE K + ++K + + D LK+ +
Sbjct: 209 YQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Query: 419 KNNKLLHALRNSGAENIFEAYCWLQQHRHELNK 451
+ K++ + E I E L Q R + K
Sbjct: 269 ELGKMMREQQQIEKE-IKEKDSELNQKRPQYIK 300
Score = 43 (20.2 bits), Expect = 5.9e-10, Sum P(3) = 5.9e-10
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 436
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 437 EAYCWLQQHRHELNK 451
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 41 (19.5 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 76 RATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
R + Y+ ++S + L G+ EE R+ID NK
Sbjct: 434 RIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 490 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 550 -ISQFGLDSS 558
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 428 RNSGAENIFEAYC 440
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
Score = 37 (18.1 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS---DRLKDMEDKNNKLL 424
+Q LG+Q + ++ Q E + ++ + T+++ ++LK E ++ K++
Sbjct: 812 NQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKII 863
>UNIPROTKB|F2Z5A8 [details] [associations]
symbol:LOC100523938 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 KO:K06636 GeneTree:ENSGT00580000081569
EMBL:CU695116 EMBL:CU914655 EMBL:GACC01000120 RefSeq:XP_003135172.3
Ensembl:ENSSSCT00000013478 GeneID:100523938 KEGG:ssc:100523938
Uniprot:F2Z5A8
Length = 1233
Score = 122 (48.0 bits), Expect = 5.9e-10, Sum P(3) = 5.9e-10
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ A+ ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLK 213
Score = 121 (47.7 bits), Expect = 5.9e-10, Sum P(3) = 5.9e-10
Identities = 79/384 (20%), Positives = 166/384 (43%)
Query: 652 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 703
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
L + + + + + NLL +CK + ++ D I + E + + +
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGSSQGED 961
Query: 764 KLA---LQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
++ ++++ + E+++ C + L DA+ + E I L+++ E + ++
Sbjct: 962 SVSGSQRTSNIYAREALIEIDYGDLC-EDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQR 1019
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+ A + + S+ Q E+E +++ + E KKE RF D
Sbjct: 1020 IAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNAC 1073
Query: 878 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLS 936
+ N + +I + SRN A G + +E D + + K FR L
Sbjct: 1074 FESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL---- 1128
Query: 937 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 996
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N
Sbjct: 1129 ----SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF- 1182
Query: 997 QCFLLTPKLLPDLEYSEACSILNI 1020
Q +++ L + Y++A S++ +
Sbjct: 1183 QAIVIS---LKEEFYTKAESLIGV 1203
Score = 98 (39.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 57/271 (21%), Positives = 118/271 (43%)
Query: 655 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 713
AA+ ++ ++E + ++ K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 714 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 773
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 774 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 833
+ K++E +K L +A++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 834 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 883
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 884 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 912
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 90 (36.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 770
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 771 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 826
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 827 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 913
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 86 (35.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 55/261 (21%), Positives = 118/261 (45%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 711 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 763
L Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 764 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 815
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 874
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 875 KEKWLPTLRNLVAQINETFSR 895
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 70 (29.7 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 649 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 705
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 706 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 744
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 745 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 801
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 802 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 861
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 862 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 921
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 922 IKVKFRQSGQLEVLSAHH 939
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 751 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 806
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 807 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 863
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 864 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 914
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 62 (26.9 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 134 EITKRF--NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
E+ + F I V N+ +F +++V +++ +L E +K QL + L E
Sbjct: 775 EVFEEFCREIGVRNIREF-EEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K+ E TVK++ + + +LK K ++ + + L+ KK
Sbjct: 834 KVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKK 881
Score = 44 (20.5 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 383 VQANQKRLQKSE------KEKILNQNKLT--LRQCSDRLKDMEDKNNKLLH-ALRNSGAE 433
++ NQKR++K E K+ + Q KL L + + K D+ NK L+ + G
Sbjct: 428 IEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDA 487
Query: 434 NIFEAYCWLQQHRHEL 449
I QQ + E+
Sbjct: 488 RIDRQESSRQQRKAEI 503
Score = 44 (20.5 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 20/93 (21%), Positives = 41/93 (44%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDMED 418
Y+ D++ + Q+ + N+ ++K KE K + ++K + + D LK+ +
Sbjct: 209 YQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Query: 419 KNNKLLHALRNSGAENIFEAYCWLQQHRHELNK 451
+ K++ + E I E L Q R + K
Sbjct: 269 ELGKMMREQQQIEKE-IKEKDSELNQKRPQYIK 300
Score = 43 (20.2 bits), Expect = 5.9e-10, Sum P(3) = 5.9e-10
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 436
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 437 EAYCWLQQHRHELNK 451
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 41 (19.5 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 76 RATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
R + Y+ ++S + L G+ EE R+ID NK
Sbjct: 434 RIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 40 (19.1 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 490 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 550 -ISQFGLDSS 558
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 428 RNSGAENIFEAYC 440
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
Score = 37 (18.1 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS---DRLKDMEDKNNKLL 424
+Q LG+Q + ++ Q E + ++ + T+++ ++LK E ++ K++
Sbjct: 812 NQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKII 863
>SGD|S000001886 [details] [associations]
symbol:SMC1 "Subunit of the multiprotein cohesin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IGI] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0000217 "DNA secondary structure binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0003680 "AT DNA
binding" evidence=IDA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 SGD:S000001886
Pfam:PF02463 GO:GO:0005524 GO:GO:0051301 EMBL:D50617 EMBL:BK006940
GO:GO:0016887 GO:GO:0006310 GO:GO:0003690 GO:GO:0006302
GO:GO:0030261 GO:GO:0003680 GO:GO:0007064 eggNOG:COG1196
SUPFAM:SSF75553 PDB:1W1W PDBsum:1W1W GO:GO:0034990
HOGENOM:HOG000195481 KO:K06636 OMA:NALVCET
GeneTree:ENSGT00580000081569 OrthoDB:EOG42VCQD EMBL:L00602
PIR:A49464 RefSeq:NP_116647.1 ProteinModelPortal:P32908 SMR:P32908
DIP:DIP-2982N IntAct:P32908 MINT:MINT-434606 STRING:P32908
PaxDb:P32908 PeptideAtlas:P32908 EnsemblFungi:YFL008W GeneID:850540
KEGG:sce:YFL008W CYGD:YFL008w EvolutionaryTrace:P32908
NextBio:966301 Genevestigator:P32908 GermOnline:YFL008W
GO:GO:0000217 Uniprot:P32908
Length = 1225
Score = 115 (45.5 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 65/354 (18%), Positives = 152/354 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI--EKEDDINT 701
+Q E + + +K ++++ N Q+E + E E I ++ +ES E ++ ++
Sbjct: 832 LQFETDRLSTTQRRYEKAQKDLEN-AQVEMKSLEEQEYAIEMKIGSIESKLEEHKNHLDE 890
Query: 702 ALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK- 760
K V + ++LN + +E N ++++ + ++ + + + ++ L+ N K
Sbjct: 891 LQKKFVTKQSELNSSED--ILEDMNSNLQVLKRERDGIKEDIEKFDLE-RVTALK-NCKI 946
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI--EEL 818
+ + + + +D ++A + SI L K++ E T +EL
Sbjct: 947 SNINIPISSETTIDDLPISSTD-----NEAITISNSIDINYKGLPKKYKENNTDSARKEL 1001
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
E I + + + + N L+ Y+ + + E ++ + E K E K+ L + +K+K
Sbjct: 1002 EQKIHE-VEEILNELQPNARALERYDEAEGRFEVINNETEQLKAEEKKILNQFLKIKKKR 1060
Query: 879 LPTLRNLVAQINETFSRNFQEMA---------VAGEVSLDEHESDFDKFGILIKVKFRQS 929
+++ ++E+ G SL + D + F +K+ +
Sbjct: 1061 KELFEKTFDYVSDHLDAIYRELTKNPNSNVELAGGNASLTIEDED-EPFNA--GIKYHAT 1117
Query: 930 GQLEVLS-AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
L+ + SGGE++V+ + L ++ PF V+DE++ +D N +++
Sbjct: 1118 PPLKRFKDMEYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRI 1171
Score = 113 (44.8 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 63/250 (25%), Positives = 104/250 (41%)
Query: 21 GNIIEIELHNFMTFDHLICKPG---SRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
G ++ +EL NF ++ + K G S +IGPNGSGKS+++ AI+ LG + L R+
Sbjct: 2 GRLVGLELSNFKSYRG-VTKVGFGESNFTSIIGPNGSGKSNMMDAISFVLGVRSNHL-RS 59
Query: 78 TSIGAYVKRG----EESG-YIKISLRGDT-----------KEEHLTIMRKIDTRN-KSEW 120
+ + RG E S Y K L + +I +RN + +
Sbjct: 60 NILKDLIYRGVLNDENSDDYDNEGAASSNPQSAYVKAFYQKGNKLVELMRIISRNGDTSY 119
Query: 121 FFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLP 180
+GK V + + NI + + Q V + A SPV+L E+ G Q
Sbjct: 120 KIDGKTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVELSRMFEEVSGSIQYK 179
Query: 181 VQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKK 240
++ L EK KL +N ++ L +E + R +L +K E K +
Sbjct: 180 KEYEELKEKIEKLSKSATESIKNRRRIHG--ELKTYKEGINKNEEYRKQLDKKNELQKFQ 237
Query: 241 LPWLKYDMKK 250
W Y +++
Sbjct: 238 ALWQLYHLEQ 247
Score = 75 (31.5 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 57/284 (20%), Positives = 120/284 (42%)
Query: 647 EQRLIEDEAAKLQ---KEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
E +I + +KL K++E++++ +++ K ++ I+ ++++ES++K D+
Sbjct: 287 ESAVISKQKSKLDYIFKDKEKLVSDLRLIKVPQQAAGKRISHIEKRIESLQK--DL---- 340
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-- 761
Q +++F+ +++ + K ++ E+ S K + E +LK
Sbjct: 341 -----QRQKTYVERFETQLKV------VTRSKEAFEEEIKQSARNYDKFKLNENDLKTYN 389
Query: 762 --HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
HEK + E+ + + ++ + + + A I+ E E+ T E+L+
Sbjct: 390 CLHEKYLTEGGSILEEKIAVLNNDKREIQEELERFNKRADISKRRITE--ELSITGEKLD 447
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK-ELKRFLAEIDALKEKW 878
+ D N L+ L E + Q IE + QE D +L+ L +ID L
Sbjct: 448 TQLNDLRVSLNEKNALHTERLHELKKLQSDIES-ANNQEYDLNFKLRETLVKIDDLSANQ 506
Query: 879 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILI 922
T++ + N + F V G V D +K+G+ +
Sbjct: 507 RETMKERKLRENIAMLKRFFP-GVKGLVH-DLCHPKKEKYGLAV 548
Score = 58 (25.5 bits), Expect = 6.2e-10, Sum P(3) = 6.2e-10
Identities = 25/90 (27%), Positives = 40/90 (44%)
Query: 364 YEPPHDKIEKLGSQILE--LGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN 421
Y H+K G ILE + V N KR + E E+ + ++ R+ ++ L +K +
Sbjct: 388 YNCLHEKYLTEGGSILEEKIAVLNNDKREIQEELERFNKRADISKRRITEELSITGEKLD 447
Query: 422 KLLHALRNSGAENIFEAYCWLQQHRHELNK 451
L+ LR S + E + HEL K
Sbjct: 448 TQLNDLRVS----LNEKNALHTERLHELKK 473
Score = 56 (24.8 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 49/210 (23%), Positives = 92/210 (43%)
Query: 657 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI------EKED-DINTALAKLVDQ 709
KL + +E+ N + + RE+EN ++L + ++ +K D N K +
Sbjct: 691 KLLIQIDELSNGQRSNSIRAREVENSVSLLNSDIANLRTQVTQQKRSLDENRLEIKYHND 750
Query: 710 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMA---SI--EFDAKIRELEFNLKQHE- 763
+ IQ K E+K L ++ + K + ++ A +I EF +KI F +K++E
Sbjct: 751 LIEKEIQP-KIT-ELKKKLDDLENTKDNLVKEKEALQNNIFKEFTSKIG---FTIKEYEN 805
Query: 764 ---KLALQASLHYEDCKKEVEHCRKHLS-DAKRQAES---IAFITPELEKEFLEMPTTIE 816
+L Q S + +K++ L + R + + +LE +EM + +E
Sbjct: 806 HSGELMRQQSKELQQLQKQILTVENKLQFETDRLSTTQRRYEKAQKDLENAQVEMKS-LE 864
Query: 817 ELEAAIQDNISQANSIFFLNQNILQEYEHR 846
E E AI+ I S ++N L E + +
Sbjct: 865 EQEYAIEMKIGSIESKLEEHKNHLDELQKK 894
Score = 54 (24.1 bits), Expect = 0.00074, Sum P(3) = 0.00074
Identities = 37/228 (16%), Positives = 107/228 (46%)
Query: 650 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVD 708
L+ ++ +LQ+ +++I+ + E + + E + ++ +R+ E +K+ ++ + L +
Sbjct: 810 LMRQQSKELQQLQKQILTV---ENKLQFETDR-LSTTQRRYEKAQKDLENAQVEMKSLEE 865
Query: 709 Q--AADLNIQQFKYAIEI-KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK--QHE 763
Q A ++ I + +E KN L E+ K+ + + S E D + ++ NL+ + E
Sbjct: 866 QEYAIEMKIGSIESKLEEHKNHLDELQK-KFVTKQSELNSSE-DI-LEDMNSNLQVLKRE 922
Query: 764 KLALQASLHYEDCKK--EVEHCRKHLSDAKRQAESIAFITP--ELEKEFLEMPTTIEELE 819
+ ++ + D ++ +++C+ + +E+ P + E + + +I+
Sbjct: 923 RDGIKEDIEKFDLERVTALKNCKISNINIPISSETTIDDLPISSTDNEAITISNSIDINY 982
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 867
+ + N+ + +E E + ++E++ + + + + L+R+
Sbjct: 983 KGLPKKYKENNT-----DSARKELEQKIHEVEEILNELQPNARALERY 1025
Score = 50 (22.7 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 383 VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
++ K LQ+ +K+ + +NKL +DRL + + K L N+ E
Sbjct: 811 MRQQSKELQQLQKQILTVENKLQFE--TDRLSTTQRRYEKAQKDLENAQVE 859
Score = 46 (21.3 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
EKL +Q+ +L V N+K +E+ L + + + +++ D+ K + L
Sbjct: 444 EKLDTQLNDLRVSLNEKNALHTERLHELKKLQSDIESANNQEYDLNFKLRETL 496
Score = 44 (20.5 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 9/36 (25%), Positives = 25/36 (69%)
Query: 389 RLQKSEKEKILNQNKLTLRQCSDRL-KDMEDKNNKL 423
R Q +++++ L++N+L ++ +D + K+++ K +L
Sbjct: 728 RTQVTQQKRSLDENRLEIKYHNDLIEKEIQPKITEL 763
>UNIPROTKB|I3LPL1 [details] [associations]
symbol:I3LPL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030915 "Smc5-Smc6 complex" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IEA] InterPro:IPR027131 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:CU074416
Ensembl:ENSSSCT00000030411 OMA:DAFSATQ Uniprot:I3LPL1
Length = 241
Score = 165 (63.1 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 45/190 (23%), Positives = 93/190 (48%)
Query: 390 LQKSEKEKILNQNKLTLRQCSDRLKD-MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHE 448
+ K +++ L + K ++ R + M K +KL R++ ++A WL+ +R +
Sbjct: 44 IDKRREKETLEKEKKSVDDHIVRFDNLMNQKEDKLRQRYRDT-----YDAVLWLRSNRDK 98
Query: 449 LNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPILN 508
+ P++L +N+ + +A Y+E+H+ ++F+ + D + K ++ +N
Sbjct: 99 FKQRVCEPIMLTINMKDNKNAKYIENHISSNDLRAFVFESQEDMEVFLKEVRDNKKLRVN 158
Query: 509 YV-SNESSR--KEPFQISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKET 565
V + ESS K P + E++ G + L ++FDAP V L Q+ + +G++ T
Sbjct: 159 AVIAPESSYADKVPSRSLNELKQYGFFSYLRELFDAPDPVMSYLCRQYHIHEVPVGTERT 218
Query: 566 DQKADNVAKL 575
+ + V KL
Sbjct: 219 REIIEQVKKL 228
>UNIPROTKB|P51834 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 EMBL:AL009126 GenomeReviews:AL009126_GR
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
EMBL:D64116 EMBL:D49781 PIR:G69708 RefSeq:NP_389476.2
ProteinModelPortal:P51834 SMR:P51834 IntAct:P51834
EnsemblBacteria:EBBACT00000001044 GeneID:938085 KEGG:bsu:BSU15940
PATRIC:18974993 GenoList:BSU15940 HOGENOM:HOG000036392 KO:K03529
ProtClustDB:CLSK2765274 BioCyc:BSUB:BSU15940-MONOMER
TIGRFAMs:TIGR02168 Uniprot:P51834
Length = 1186
Score = 150 (57.9 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 71/339 (20%), Positives = 153/339 (45%)
Query: 655 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLN 714
A K Q + E N+ ++ K++ E E + K L + E +T+ + +++AA
Sbjct: 820 AKKEQACKGEEDNLARL-KKELTETELALKEAKEDLSFLTSEMSSSTSGEEKLEEAA--- 875
Query: 715 IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQASLHY 773
K+ + K +E+++ + K ++ ++ +++E++ KQ L +
Sbjct: 876 ----KHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEMKRLYKQKTTLLKDEEVKL 931
Query: 774 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 833
+ E+++ ++L R+ S++F E KE ++ T EE ++ +
Sbjct: 932 GRMEVELDNLLQYL----REEYSLSF---EGAKEKYQLETDPEEARKRVKLIKLAIEELG 984
Query: 834 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE-IDALKEKWLPTLRNLVAQINET 892
+N + E+E + + LS ++E D E K L + I+ + E+ + QI
Sbjct: 985 TVNLGSIDEFERVNERYKFLSEQKE-DLTEAKNTLFQVIEEMDEEMTKRFNDTFVQIRSH 1043
Query: 893 FSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILY 952
F + F+ + G L + + D +++ + G+ ++ + + SGGER+++ I
Sbjct: 1044 FDQVFRSLFGGGRAELRLTDPN-DLLHSGVEIIAQPPGK-KLQNLNLLSGGERALTAIAL 1101
Query: 953 LVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS 991
L S+ + PF V+DE+ +D N + Q L + +S
Sbjct: 1102 LFSILKVRPVPFCVLDEVEAALDEANVFRFAQYLKKYSS 1140
Score = 81 (33.6 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 45/205 (21%), Positives = 85/205 (41%)
Query: 48 VIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEES----GYIKISLRGDTKE 103
V+GPNGSGKS++ AI LG + R + + G +S +++L D +
Sbjct: 29 VVGPNGSGKSNITDAIRWVLGEQSARSLRGGKMEDIIFAGSDSRKRLNLAEVTLTLDNDD 88
Query: 104 EHL-------TIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
L ++ R++ +SE+ N + +++++ + + + Q +V
Sbjct: 89 HFLPIDFHEVSVTRRVYRSGESEFLINNQPCRLKDIIDLFMDSGLGKEAFS-IISQGKVE 147
Query: 157 EFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE 216
E E+A G L K+ K K E + D LN+++ + E
Sbjct: 148 EILSSKAEDRRSIFEEAAG---------VLKYKTRKKKA-ENKLFETQDNLNRVEDILHE 197
Query: 217 QEKDVERVRQRAELLEKVESMKKKL 241
E VE ++ +A + + KK+L
Sbjct: 198 LEGQVEPLKIQASIAKDYLEKKKEL 222
Score = 56 (24.8 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 30/132 (22%), Positives = 65/132 (49%)
Query: 123 NGKVVPKGEVLE-ITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPV 181
N ++ + LE +TKR ++ T L Q+ + K S +++ EK + D +
Sbjct: 669 NNSLLGRSRELEDVTKRL-AEMEEKTALLEQE--VKTLKHS----IQDMEKKLADLRETG 721
Query: 182 QHCALVEKSSKLKTIECTV-KRNGDTLNQL--KALNVEQEKDVERVRQRAELLEKVESMK 238
+ L ++ K + E V ++N +T +L + + E D ER ++ +L E++ ++
Sbjct: 722 EGLRLKQQDVKGQLYELQVAEKNINTHLELYDQEKSALSESDEERKVRKRKLEEELSAVS 781
Query: 239 KKLPWLKYDMKK 250
+K+ L+ D+ +
Sbjct: 782 EKMKQLEEDIDR 793
Score = 51 (23.0 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 37/217 (17%), Positives = 85/217 (39%)
Query: 215 VEQEKDVERVRQRAELLEKVESMKKKLPWLK--YDMKKAEYIXXXXXXXXXXXXXXXXXN 272
+E++K++E V + A +E + K LK M K E + +
Sbjct: 216 LEKKKELEHV-EIALTAYDIEELHGKWSTLKEKVQMAKEEELAESSAISAKEAKIEDTRD 274
Query: 273 TLHEFSKPIEGKKQEKAILDGDCKKLSS---LINENSKRRMDFLEKVDXXXXXXXXKYKX 329
+ + ++ +Q + + +KL ++ E K + E+++ K
Sbjct: 275 KIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETV 334
Query: 330 XXXXXXXXXXXXXXI-LKARXXXXXXXXXXQTVPAY-EPPHDKIEKLGSQILEL-GVQAN 386
+ + + Q + + E +KIE+L S EL QA+
Sbjct: 335 LKEELSKQEAVFETLQAEVKQLRAQVKEKQQALSLHNENVEEKIEQLKSDYFELLNSQAS 394
Query: 387 -QKRLQKSEKEKILNQNKLTLRQCSDRL-KDMEDKNN 421
+ LQ + + ++Q+ +TL++ +D K ++++++
Sbjct: 395 IRNELQLLDDQ--MSQSAVTLQRLADNNEKHLQERHD 429
Score = 44 (20.5 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 189 KSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ-RAELLEKVESMKKKL 241
+SS + E ++ DT ++++AL+ E ++++V +E LEK+E K+ L
Sbjct: 258 ESSAISAKEAKIE---DTRDKIQALD-ESVDELQQVLLVTSEELEKLEGRKEVL 307
Score = 44 (20.5 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 192 KLKTIECTVKRNGDTLN--QLKALN---VEQEKDVERVRQR-AELLEKVESMKKKLPWLK 245
++ T+E V G ++ +K N + + +++E V +R AE+ EK +++++ LK
Sbjct: 645 RIVTLEGDVVNPGGSMTGGAVKKKNNSLLGRSRELEDVTKRLAEMEEKTALLEQEVKTLK 704
Query: 246 YDMKKAE 252
+ ++ E
Sbjct: 705 HSIQDME 711
Score = 39 (18.8 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQ 401
+K+++L I L QK+ Q S KE + N+
Sbjct: 782 EKMKQLEEDIDRL---TKQKQTQSSTKESLSNE 811
>UNIPROTKB|Q9X1X1 [details] [associations]
symbol:rad50 "Probable DNA double-strand break repair Rad50
ATPase" species:243274 "Thermotoga maritima MSB8" [GO:0005515
"protein binding" evidence=IPI] GO:GO:0005524 GO:GO:0046872
GO:GO:0006281 GO:GO:0016787 EMBL:AE000512 GenomeReviews:AE000512_GR
eggNOG:COG0419 InterPro:IPR013134 PROSITE:PS51131 PIR:D72230
RefSeq:NP_229436.1 PDB:3QF7 PDB:3QG5 PDB:3THO PDBsum:3QF7
PDBsum:3QG5 PDBsum:3THO ProteinModelPortal:Q9X1X1 IntAct:Q9X1X1
GeneID:897923 KEGG:tma:TM1636 PATRIC:23938246 KO:K03546 OMA:LVITHID
ProtClustDB:CLSK875880 Uniprot:Q9X1X1
Length = 852
Score = 125 (49.1 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 57/238 (23%), Positives = 112/238 (47%)
Query: 667 NIVQIEKRKRREMENHINLRKRKLESIEK-EDDINTALAKLVDQAADLNIQQFKY-AIEI 724
N+ ++E+ RR + R+++L SIEK E++ L KL+D+ + L K+ A +I
Sbjct: 367 NLTRLEEEFRR-LVGEKEKREKELLSIEKTENETKNELEKLLDELSILKKDHMKWLAYQI 425
Query: 725 KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL-----ALQASLHY-EDCKK 778
+ L E +C + F K+ +EFN+ + EKL L+ +L+ ++ KK
Sbjct: 426 ASSLNEGDTCP-------VCGGVFHGKVEAVEFNIDEFEKLDQKRSELENTLNVLKERKK 478
Query: 779 E----VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI-- 832
+E + + K+ +SI ++E+E + + E+LE + + + I
Sbjct: 479 SLSSLIEDLLMKIEEGKKNLKSIRNQIEKIEEELHRLGYS-EDLEEKLDEKRKKLRKIEE 537
Query: 833 --FFLNQNILQ---EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 885
++Q I + + Q++++ + EA ++ LK E+D LK + LR +
Sbjct: 538 ERHSISQKITAADVQISQIENQLKEIKGEIEAKRETLKEQREEMDQLKSDFFDRLRKI 595
Score = 113 (44.8 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 65/245 (26%), Positives = 111/245 (45%)
Query: 26 IELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVK 85
+ + NF+ ++ + S + +V GPNG+GKSSL AI+ AL G+ R + YV
Sbjct: 6 LTVRNFLGLKNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGI---RYPNSYDYVN 62
Query: 86 RGEESGYIKISLRGDTKEEHLTIMRKIDTRNK------SEWFFNGKVV-----PKGEVLE 134
R G ++ + + + I+R+I+ + SE NGK P E
Sbjct: 63 RNAVDGTARLVFQFERGGKRYEIIREINALQRKHNAKLSEILENGKKAAIAAKPTSVKQE 122
Query: 135 ITKRFNIQVNNL--TQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ K I+ T FLPQ + + +SP E TE + D Q +EK K
Sbjct: 123 VEKILGIEHRTFIRTVFLPQGEIDKLL-ISPPS--EITE-IISDV---FQSKETLEKLEK 175
Query: 193 LKTIECTVKRNGDTLNQLKALNVE-----QEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
L ++ +K+ + ++ L+AL +E D+E ++ L+ V KK+L + +
Sbjct: 176 L--LKEKMKKLENEISSLQALYTAIWKYLEENDLEVLKSE---LKTVSEKKKELLKKREE 230
Query: 248 MKKAE 252
++K E
Sbjct: 231 LQKEE 235
Score = 109 (43.4 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 86/387 (22%), Positives = 175/387 (45%)
Query: 650 LIEDEAAKLQKEREEIINIV-QIEKRKRR--------EMENHINLRKRKLESIEKEDDIN 700
LIED K+++ ++ + +I QIEK + ++E ++ +++KL IE+E +
Sbjct: 483 LIEDLLMKIEEGKKNLKSIRNQIEKIEEELHRLGYSEDLEEKLDEKRKKLRKIEEER--H 540
Query: 701 TALAKLVDQAADLNIQQFKYAI-EIKNLL-VEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
+ K+ AAD+ I Q + + EIK + + + K E +F ++R++
Sbjct: 541 SISQKIT--AADVQISQIENQLKEIKGEIEAKRETLKEQREEMDQLKSDFFDRLRKIGIG 598
Query: 759 LKQHEKLALQASLHYEDCKKE---VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 815
++ L + +D +KE VE + L ++ ++ ES ++ +++ ++ +
Sbjct: 599 FEEFRILVKE---EVKDAEKELGVVETEIRLLEESLKELESEN--VRDVSEDYEKVRNQL 653
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE------LKRFLA 869
E L I D + LN ++++E R+R+++ L K + E L+++L
Sbjct: 654 EALSQEISDLERKEGR---LN-HLIEETLRRERELKSLEKKLKEMSDEYNNLDLLRKYLF 709
Query: 870 EIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS 929
+ + T R L A + T + + ++ G +D D +K G +IK
Sbjct: 710 DKSNFSRYF--TGRVLEAVLKRT--KAYLDILTNGRFDID---FDDEKGGFIIK-----D 757
Query: 930 GQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRV--VDEINQGMDPINERKMFQQLV 987
+E A SGGER++ +I +SL ++ + +DE +D N+ K+ ++
Sbjct: 758 WGIE-RPARGLSGGERALISISLAMSLAEVASGRLDAFFIDEGFSSLDTENKEKI-ASVL 815
Query: 988 RAASQPNTPQCFLLTPKLLPDLEYSEA 1014
+ + N F+ D E+SEA
Sbjct: 816 KELERLNKVIVFITH-----DREFSEA 837
Score = 104 (41.7 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 54/256 (21%), Positives = 122/256 (47%)
Query: 653 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAA 711
DE KL ++R E+ N + + K +++ + + I K+E +K I + K+ ++
Sbjct: 454 DEFEKLDQKRSELENTLNVLKERKKSLSSLIEDLLMKIEEGKKNLKSIRNQIEKIEEELH 513
Query: 712 DLNIQQ-FKYAIEIKNL-LVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 769
L + + ++ K L +I + S ++K A+ D +I ++E LK+ K ++A
Sbjct: 514 RLGYSEDLEEKLDEKRKKLRKIEEERHSISQKITAA---DVQISQIENQLKEI-KGEIEA 569
Query: 770 SLH-YEDCKKEVEHCRKHLSDAKRQA----ESIAFITPE----LEKEFLEMPTTIEELEA 820
++ ++E++ + D R+ E + E EKE + T I LE
Sbjct: 570 KRETLKEQREEMDQLKSDFFDRLRKIGIGFEEFRILVKEEVKDAEKELGVVETEIRLLEE 629
Query: 821 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK-QEADKKELK-RFLAEIDALKEKW 878
++++ + N +++ ++YE + Q+E LS + + ++KE + L E +E+
Sbjct: 630 SLKE-LESENV-----RDVSEDYEKVRNQLEALSQEISDLERKEGRLNHLIEETLRRERE 683
Query: 879 LPTLRNLVAQINETFS 894
L +L + ++++ ++
Sbjct: 684 LKSLEKKLKEMSDEYN 699
Score = 84 (34.6 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 60/279 (21%), Positives = 116/279 (41%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E +L+ E+E I + + + + ++E K +L+ +EK + A L++Q
Sbjct: 306 EKRYKELESEKEAISKEIPVHRERLSKLEEIGEKIKEELDLLEK---VLKASRPLLEQRI 362
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYA--EK--HMASIEFDAKIRELEFNLKQHEK-LA 766
L + E + L+ E + EK + E + + EL K H K LA
Sbjct: 363 RLKENLTRLEEEFRRLVGEKEKREKELLSIEKTENETKNELEKLLDELSILKKDHMKWLA 422
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 826
Q + E + C + E++ F E EK L+ + ELE +
Sbjct: 423 YQIA----SSLNEGDTCPVCGGVFHGKVEAVEFNIDEFEK--LDQKRS--ELENTLNVLK 474
Query: 827 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLV 886
+ S+ L +++L + E ++ ++ + + E ++EL R L + L+EK L R +
Sbjct: 475 ERKKSLSSLIEDLLMKIEEGKKNLKSIRNQIEKIEEELHR-LGYSEDLEEK-LDEKRKKL 532
Query: 887 AQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK 925
+I E + + A +V + + E+ + I+ K
Sbjct: 533 RKIEEE-RHSISQKITAADVQISQIENQLKEIKGEIEAK 570
Score = 46 (21.3 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 361 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSE---KEKI-LNQNKLTLRQCSDRLKDM 416
+P + K+E++G +I E + +K L+ S +++I L +N L + RL
Sbjct: 323 IPVHRERLSKLEEIGEKIKE-ELDLLEKVLKASRPLLEQRIRLKENLTRLEEEFRRLVGE 381
Query: 417 EDKNNKLLHALRNSGAE 433
++K K L ++ + E
Sbjct: 382 KEKREKELLSIEKTENE 398
Score = 39 (18.8 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 393 SEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
SEK+K L + + L++ ++LK + +K +L+
Sbjct: 218 SEKKKELLKKREELQKEEEQLKRLLEKYRELV 249
>CGD|CAL0004031 [details] [associations]
symbol:SMC3 species:5476 "Candida albicans" [GO:0034990
"nuclear mitotic cohesin complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0030437 "ascospore formation" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0007064 "mitotic sister chromatid cohesion" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
EMBL:AACQ01000026 SUPFAM:SSF75553 KO:K06669 RefSeq:XP_720093.1
ProteinModelPortal:Q5AEZ0 STRING:Q5AEZ0 GeneID:3638190
KEGG:cal:CaO19.7895 CGD:CAL0062457 Uniprot:Q5AEZ0
Length = 1240
Score = 133 (51.9 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 76/362 (20%), Positives = 147/362 (40%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 706
E +I + KL K R+E Q + + ++E + K LE E + ++ + +L
Sbjct: 823 ESEVINNLQPKLNKYRQEQQKQHQQQLQLQQESSRSSDT-KSNLEYEELQQELESLHIQL 881
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 766
D + N Q + +I EI +C+ A+ + I+ I+ +E KQ L
Sbjct: 882 -DTSQSRNSQVVENLTKINE---EINNCEQELAQANKQQIKI---IKNIEKFSKQTNNLL 934
Query: 767 LQASLHYE---DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
Q S+ + D +++ +A + + + + +L + + + + +
Sbjct: 935 NQKSIKSQMRDDANQKIRELGVLPEEAFQSEKYDQYSSDQLLSKLNGINQELTKYSHINK 994
Query: 824 DNISQANSIFFLNQNILQ---EYEHRQRQIEDLST-----KQEADKKELKRFLAEIDALK 875
I Q N ++++ + + + IE+L T K +A KK + +
Sbjct: 995 KAIEQFNLFNRQKEDLMARRIDLNNSKASIENLITNLQQQKNDAIKKSFNQVAKSFKQIF 1054
Query: 876 EKWLPT-LRNLVAQINETFSRNFQEMA-VAGEVSLDEHESDFDKF-GILIKVKFRQSGQL 932
EK +P NL+ Q + N V + D+ + D D + G+ I V F
Sbjct: 1055 EKLVPRGTGNLIMQKKNDNNNNVNVTDDVNSDNDDDDDDDDIDNYSGVAISVSFNSKND- 1113
Query: 933 EVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 992
E SGG++S+ I + ++Q+ PF + DEI+ +D R +L+ S+
Sbjct: 1114 EQQRIEQLSGGQKSLCAIALIFAIQNCDPAPFYLFDEIDSNLDT-QYRISVARLIHELSR 1172
Query: 993 PN 994
N
Sbjct: 1173 NN 1174
Score = 113 (44.8 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 52/236 (22%), Positives = 109/236 (46%)
Query: 666 INIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEI 724
I+ ++I+ RK++E+E R+L + KE + N+ L KL ++ LN++ ++
Sbjct: 671 IDALKIQTRKKQELEK----TDRELIKVTKEIESTNSQLNKLNNEL-QLNVR------DL 719
Query: 725 KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK--QHEKLALQASLHYEDCKKEVEH 782
L V K ++ D +I L+ NL+ Q+ K +++ +L + + E
Sbjct: 720 DRLSVSKEPIKIELSQLTNKKFNLDQEISSLKSNLQNLQNTKNSIKVNLKQHESELNSEF 779
Query: 783 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 842
+ D + + + ++ ELE + + T EL+ I S+ + N ++
Sbjct: 780 TQVLTQDEQNELDELSKSAIELESKLDHIVTRSSELDTKISGIESEVINNLQPKLNKYRQ 839
Query: 843 YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQ 898
+ +Q Q + L +QE+ + + E + L+++ L +L Q++ + SRN Q
Sbjct: 840 EQQKQHQ-QQLQLQQESSRSSDTKSNLEYEELQQE----LESLHIQLDTSQSRNSQ 890
Score = 98 (39.6 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 49/225 (21%), Positives = 96/225 (42%)
Query: 22 NIIEIELHNFMTFDHL--ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
+I +I + F T+ + I N+V+G NGSGKS+ AI L + R
Sbjct: 2 HIKKIIIQGFKTYKNTTTIDLLSPHCNVVVGRNGSGKSNFFAAIRFVLSDAYTHMSREER 61
Query: 80 IGAYVKRGEE---SGYIKISL-----RGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGE 131
G + G S Y++I R + ++I R I + K ++ +GK + +
Sbjct: 62 QGL-IHEGSGTVMSAYVEIIFDNTDGRFPINKPEISIRRTIGLK-KDDYSLDGKSATRSD 119
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP---VKLLEETEKA-VGDPQLPVQHCALV 187
++ + + +N +PQ R+ + LL+E A V + +L +
Sbjct: 120 IMNLLESAGFSRSNPYYIVPQGRITSLTNSKNHERLNLLKEVSGANVFENKLKESMKEMN 179
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE 232
+ + K I+ T+ + L L+ + + KD +++ + ++LE
Sbjct: 180 QSNLKRARIDETLVSIEERLKDLQIESADL-KDFQKLDKLKKILE 223
Score = 92 (37.4 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 50/260 (19%), Positives = 123/260 (47%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKL-ESIEK-EDDINTALAKLVD 708
IE+ LQ E ++ + +++K K+ N + +L ES+E+ E+ + L +
Sbjct: 195 IEERLKDLQIESADLKDFQKLDKLKKILEFNIFDREYNELNESLEELEEKHQSILQESKQ 254
Query: 709 QAADLNIQQFKYAIEIKNLLVEI-VSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLAL 767
+L ++ K +E+++ + E+ +S K EK + ++ D ++ + ++ KL
Sbjct: 255 DLIELEKRE-KLCVELQDSINELKISAKVLKLEKEQSDLDCDQLLKVIA---EKEIKLR- 309
Query: 768 QASLHYEDCKKEVEHCRKHL----SDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
+ SL+ E K++ H + + S+ + + I+ PEL K +++ E++++
Sbjct: 310 ELSLNNELSKEQNIHINEQIGILQSEINQHKQEISRYKPELNK--------LQQQESSLK 361
Query: 824 DNISQANS---IFFLNQNILQEYEHRQRQIEDLST------KQEADKKELKRFLAEIDAL 874
+S+ +S + Q+ ++ +++ + L+T +Q DK + R ++
Sbjct: 362 QQLSEISSKQRALYAKQSRFSKFVNKKDRDSWLNTEISKLKRQITDKDQEMRHISNEVKT 421
Query: 875 KEKWLPTLRNLVAQINETFS 894
+E L L + ++N++ +
Sbjct: 422 RESSLEALSESIKKLNDSLN 441
Score = 53 (23.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 46/242 (19%), Positives = 94/242 (38%)
Query: 75 GRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLE 134
G T + AYV E + R + ++I R I + K ++ +GK + +++
Sbjct: 68 GSGTVMSAYV----EIIFDNTDGRFPINKPEISIRRTIGLK-KDDYSLDGKSATRSDIMN 122
Query: 135 ITKRFNIQVNNLTQFLPQDRVCEFAKLSP---VKLLEETEKA-VGDPQLPVQHCALVEKS 190
+ + +N +PQ R+ + LL+E A V + +L + + +
Sbjct: 123 LLESAGFSRSNPYYIVPQGRITSLTNSKNHERLNLLKEVSGANVFENKLKESMKEMNQSN 182
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE------KVESMKKKLPWL 244
K I+ T+ + L L+ + + KD +++ + ++LE + + + L L
Sbjct: 183 LKRARIDETLVSIEERLKDLQIESADL-KDFQKLDKLKKILEFNIFDREYNELNESLEEL 241
Query: 245 --KYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLI 302
K+ E ++++E + K EK D DC +L +I
Sbjct: 242 EEKHQSILQESKQDLIELEKREKLCVELQDSINELKISAKVLKLEKEQSDLDCDQLLKVI 301
Query: 303 NE 304
E
Sbjct: 302 AE 303
Score = 50 (22.7 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 373 KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA 432
+L I EL + A +L+K + + +Q + + +L+++ NN+L
Sbjct: 268 ELQDSINELKISAKVLKLEKEQSDLDCDQLLKVIAEKEIKLRELS-LNNELSKEQNIHIN 326
Query: 433 ENIFEAYCWLQQHRHELNKEAYGPVL 458
E I + QH+ E+++ Y P L
Sbjct: 327 EQIGILQSEINQHKQEISR--YKPEL 350
Score = 46 (21.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 14/60 (23%), Positives = 34/60 (56%)
Query: 369 DKIEKLGSQILELGVQ-ANQKRLQKSEK-EKILNQNKLT--LRQCSDRLKDMEDKNNKLL 424
+ + + ++ +L ++ A+ K QK +K +KIL N + ++ L+++E+K+ +L
Sbjct: 190 ETLVSIEERLKDLQIESADLKDFQKLDKLKKILEFNIFDREYNELNESLEELEEKHQSIL 249
Score = 45 (20.9 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQL----KALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ +K +++ I VK +L L K LN + D E ++ A L + K+++
Sbjct: 405 ITDKDQEMRHISNEVKTRESSLEALSESIKKLN-DSLNDEEHIKTLANLKTTINDSKQQI 463
Query: 242 PWLKYDMKK 250
L D +K
Sbjct: 464 TQL-VDQRK 471
>WB|WBGene00003367 [details] [associations]
symbol:mix-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] [GO:0042464 "dosage
compensation by hypoactivation of X chromosome" evidence=IMP]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0000775
"chromosome, centromeric region" evidence=IDA] [GO:0046536 "dosage
compensation complex" evidence=IPI] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0009792 GO:GO:0000775
GO:GO:0051301 GO:GO:0002119 GO:GO:0040039 GO:GO:0000793
GO:GO:0007076 EMBL:Z46935 GO:GO:0042464 eggNOG:COG1196
GO:GO:0046536 SUPFAM:SSF75553 EMBL:U96387 PIR:T23744 PIR:T23981
RefSeq:NP_496331.1 UniGene:Cel.8608 ProteinModelPortal:Q09591
SMR:Q09591 IntAct:Q09591 STRING:Q09591 PaxDb:Q09591
EnsemblMetazoa:M106.1 GeneID:174669 KEGG:cel:CELE_M106.1
UCSC:M106.1 CTD:174669 WormBase:M106.1 GeneTree:ENSGT00550000074857
HOGENOM:HOG000016791 InParanoid:Q09591 KO:K06674 OMA:KSYQKHT
NextBio:884988 PANTHER:PTHR18937:SF9 Uniprot:Q09591
Length = 1244
Score = 124 (48.7 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 70/337 (20%), Positives = 139/337 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
+Q ++ + + +K R E++ + +E+ ++ ++ ++K E E E+ + A
Sbjct: 813 LQKAEQTVAQNKNRGEKARREVMLLQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNA 872
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRE-LEFNLKQ 761
+A L D + Q K ++KN +I S + K E DA IRE + K+
Sbjct: 873 IAALKDAELEQKAAQAKLN-DLKNNQRQI-STRLGKIAK-----ECDALIREKAKTKSKR 925
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE---LEKEFLEMPTTIEEL 818
EK SL + E R L + ++ A + + E + +E+
Sbjct: 926 EEKEKELTSLQQSEASNRKE-ARSKLKKFEWLSDEEAHFNKKGGLYDFEGYTVSKGKDEI 984
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
+ + D I + QN+ + + ++ D+ K+E ++ I L +K
Sbjct: 985 KE-LTDKIETLERSCCI-QNV-SNLDTCEAKVLDIKNKRERITEDFNMLKKTIATLDKKK 1041
Query: 879 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAH 938
+ L +N+ F + F + SL E G+ +KV F G + S H
Sbjct: 1042 VDELIRAHESVNKDFGQIFNCLLPDAHASLVPPEGKTVCEGLEVKVSF---GGVVKDSLH 1098
Query: 939 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
SGG+RS+ + ++++ P ++DE++ +D
Sbjct: 1099 ELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALD 1135
Score = 106 (42.4 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 56/259 (21%), Positives = 106/259 (40%)
Query: 22 NIIEIELHNFMTFD-HL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
+I I L F ++ H I N + G NGSGKS+++ +I +G + RA S
Sbjct: 2 HIKSIHLDGFKSYQKHTDILDFSPTFNAITGYNGSGKSNILDSICFIMGINKLDNIRAKS 61
Query: 80 IGAYVKRGEESGYIKISLRGDTKE------EHLT--IMRKIDTRNKS------EWFFNGK 125
+ + G +++ K EHL ++++I T + + NG
Sbjct: 62 MHELISHGGTKAIVQVRFDNTDKRCSPFGMEHLDEIVVQRIITAQATGKGCATSYTLNGH 121
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVG----DPQLPV 181
G++ + + + VNN + Q R+ + P ++L E+A G D +
Sbjct: 122 AATNGKMQDFFRGVGLNVNNPHFLIMQGRITTVLNMKPEEILGMVEEAAGTKMYDQKKKD 181
Query: 182 QHCALVEKSSKLKTIECT---------VKRNGDTLNQLKALNVEQEKD-VERVRQRAELL 231
+ K +KLK ++ VK D N ++ +++ K+ R + +
Sbjct: 182 AEKTMFLKDAKLKEVDRIFQSSIDPRMVKFREDRKNMVEVTRLKKLKENFSRKYEAFQYF 241
Query: 232 EKVESMKKKLPWLKYDMKK 250
+ E++KK ++ D KK
Sbjct: 242 QTCEAVKKSAKEIE-DAKK 259
Score = 84 (34.6 bits), Expect = 0.00082, Sum P(4) = 0.00082
Identities = 83/388 (21%), Positives = 160/388 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
M + IE + +L E+ + + +K R++ N + RKL ++ +IN +
Sbjct: 696 MYARRPQIEAQQRELDALNREL-QLTEASSQKCRDLNNQLATAMRKLAQVKT--NINNSE 752
Query: 704 AKLVDQAADLNIQQF-KYAIEIKNLLVEI--VSCKWSYAE--KHMASIEFDAKIRELEFN 758
+V + ++ +++ K EI+ + + V K E K+ + + +EL
Sbjct: 753 FGIVVRDLKVHSEEYEKNQAEIEATVKTLKDVEDKIKTLESMKNKDKNSQEKRKKELTAL 812
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
L++ E+ Q E ++EV + + + ++ + I + +KE E+ +
Sbjct: 813 LQKAEQTVAQNKNRGEKARREVMLLQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNA 872
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
AA++D + + Q L + ++ QRQI ST+ KE + E K K
Sbjct: 873 IAALKDAELEQKAA----QAKLNDLKNNQRQI---STRLGKIAKECDALIREKAKTKSKR 925
Query: 879 LPTLRNLVA-QINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQS-GQLEVL 935
+ L + Q +E +R + L + E+ F+K G L + + S G+ E+
Sbjct: 926 EEKEKELTSLQQSEASNRKEARSKLKKFEWLSDEEAHFNKKGGLYDFEGYTVSKGKDEIK 985
Query: 936 SAHHQSGG-ERS--VSTILYLVSLQ----DLTNCPFRVVDEINQGMDPIN--ERKMFQQL 986
+ ERS + + L + + D+ N R+ ++ N I ++K +L
Sbjct: 986 ELTDKIETLERSCCIQNVSNLDTCEAKVLDIKNKRERITEDFNMLKKTIATLDKKKVDEL 1045
Query: 987 VRAASQPNTP--QCFLLTPKLLPDLEYS 1012
+RA N Q F LLPD S
Sbjct: 1046 IRAHESVNKDFGQIFNC---LLPDAHAS 1070
Score = 55 (24.4 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 160 KLSPVKL-LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
KL+ VK + +E + L V H EK+ IE TVK D +++K L +
Sbjct: 740 KLAQVKTNINNSEFGIVVRDLKV-HSEEYEKNQA--EIEATVKTLKDVEDKIKTLESMKN 796
Query: 219 KDV----ERVRQRAELLEKVE 235
KD +R ++ LL+K E
Sbjct: 797 KDKNSQEKRKKELTALLQKAE 817
Score = 51 (23.0 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKL-----TLRQCSDRLKDMEDKNNK 422
E G+ ++ E EK NQ ++ TL+ D++K +E NK
Sbjct: 752 EFGIVVRDLKVHSEEYEK--NQAEIEATVKTLKDVEDKIKTLESMKNK 797
Score = 40 (19.1 bits), Expect = 9.6e-08, Sum P(4) = 9.6e-08
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 359 QTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKE 396
QT A + +IE I +LG + NQ L KE
Sbjct: 242 QTCEAVKKSAKEIEDAKKGIEDLGEKFNQLDLDLKNKE 279
Score = 38 (18.4 bits), Expect = 9.6e-08, Sum P(4) = 9.6e-08
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 511 SNESSRKEPFQISEEMRALGISARLDQVFDAPHAVK--EVLISQFGLDSSYIGSKETDQK 568
S ++ +KE +I+++++ LG + D HA K E + +D+ + S + +
Sbjct: 449 SADNYQKEVDEINKQLQLLGFNIDADTE-KREHAAKLHESITKLKDMDTRLLNSYKDGRY 507
Query: 569 ADN 571
A N
Sbjct: 508 ALN 510
>UNIPROTKB|Q09591 [details] [associations]
symbol:mix-1 "Mitotic chromosome and
X-chromosome-associated protein mix-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0009792
GO:GO:0000775 GO:GO:0051301 GO:GO:0002119 GO:GO:0040039
GO:GO:0000793 GO:GO:0007076 EMBL:Z46935 GO:GO:0042464
eggNOG:COG1196 GO:GO:0046536 SUPFAM:SSF75553 EMBL:U96387 PIR:T23744
PIR:T23981 RefSeq:NP_496331.1 UniGene:Cel.8608
ProteinModelPortal:Q09591 SMR:Q09591 IntAct:Q09591 STRING:Q09591
PaxDb:Q09591 EnsemblMetazoa:M106.1 GeneID:174669
KEGG:cel:CELE_M106.1 UCSC:M106.1 CTD:174669 WormBase:M106.1
GeneTree:ENSGT00550000074857 HOGENOM:HOG000016791 InParanoid:Q09591
KO:K06674 OMA:KSYQKHT NextBio:884988 PANTHER:PTHR18937:SF9
Uniprot:Q09591
Length = 1244
Score = 124 (48.7 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 70/337 (20%), Positives = 139/337 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINI-VQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
+Q ++ + + +K R E++ + +E+ ++ ++ ++K E E E+ + A
Sbjct: 813 LQKAEQTVAQNKNRGEKARREVMLLQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNA 872
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRE-LEFNLKQ 761
+A L D + Q K ++KN +I S + K E DA IRE + K+
Sbjct: 873 IAALKDAELEQKAAQAKLN-DLKNNQRQI-STRLGKIAK-----ECDALIREKAKTKSKR 925
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE---LEKEFLEMPTTIEEL 818
EK SL + E R L + ++ A + + E + +E+
Sbjct: 926 EEKEKELTSLQQSEASNRKE-ARSKLKKFEWLSDEEAHFNKKGGLYDFEGYTVSKGKDEI 984
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
+ + D I + QN+ + + ++ D+ K+E ++ I L +K
Sbjct: 985 KE-LTDKIETLERSCCI-QNV-SNLDTCEAKVLDIKNKRERITEDFNMLKKTIATLDKKK 1041
Query: 879 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAH 938
+ L +N+ F + F + SL E G+ +KV F G + S H
Sbjct: 1042 VDELIRAHESVNKDFGQIFNCLLPDAHASLVPPEGKTVCEGLEVKVSF---GGVVKDSLH 1098
Query: 939 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
SGG+RS+ + ++++ P ++DE++ +D
Sbjct: 1099 ELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALD 1135
Score = 106 (42.4 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 56/259 (21%), Positives = 106/259 (40%)
Query: 22 NIIEIELHNFMTFD-HL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
+I I L F ++ H I N + G NGSGKS+++ +I +G + RA S
Sbjct: 2 HIKSIHLDGFKSYQKHTDILDFSPTFNAITGYNGSGKSNILDSICFIMGINKLDNIRAKS 61
Query: 80 IGAYVKRGEESGYIKISLRGDTKE------EHLT--IMRKIDTRNKS------EWFFNGK 125
+ + G +++ K EHL ++++I T + + NG
Sbjct: 62 MHELISHGGTKAIVQVRFDNTDKRCSPFGMEHLDEIVVQRIITAQATGKGCATSYTLNGH 121
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVG----DPQLPV 181
G++ + + + VNN + Q R+ + P ++L E+A G D +
Sbjct: 122 AATNGKMQDFFRGVGLNVNNPHFLIMQGRITTVLNMKPEEILGMVEEAAGTKMYDQKKKD 181
Query: 182 QHCALVEKSSKLKTIECT---------VKRNGDTLNQLKALNVEQEKD-VERVRQRAELL 231
+ K +KLK ++ VK D N ++ +++ K+ R + +
Sbjct: 182 AEKTMFLKDAKLKEVDRIFQSSIDPRMVKFREDRKNMVEVTRLKKLKENFSRKYEAFQYF 241
Query: 232 EKVESMKKKLPWLKYDMKK 250
+ E++KK ++ D KK
Sbjct: 242 QTCEAVKKSAKEIE-DAKK 259
Score = 84 (34.6 bits), Expect = 0.00082, Sum P(4) = 0.00082
Identities = 83/388 (21%), Positives = 160/388 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
M + IE + +L E+ + + +K R++ N + RKL ++ +IN +
Sbjct: 696 MYARRPQIEAQQRELDALNREL-QLTEASSQKCRDLNNQLATAMRKLAQVKT--NINNSE 752
Query: 704 AKLVDQAADLNIQQF-KYAIEIKNLLVEI--VSCKWSYAE--KHMASIEFDAKIRELEFN 758
+V + ++ +++ K EI+ + + V K E K+ + + +EL
Sbjct: 753 FGIVVRDLKVHSEEYEKNQAEIEATVKTLKDVEDKIKTLESMKNKDKNSQEKRKKELTAL 812
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
L++ E+ Q E ++EV + + + ++ + I + +KE E+ +
Sbjct: 813 LQKAEQTVAQNKNRGEKARREVMLLQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNA 872
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
AA++D + + Q L + ++ QRQI ST+ KE + E K K
Sbjct: 873 IAALKDAELEQKAA----QAKLNDLKNNQRQI---STRLGKIAKECDALIREKAKTKSKR 925
Query: 879 LPTLRNLVA-QINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQS-GQLEVL 935
+ L + Q +E +R + L + E+ F+K G L + + S G+ E+
Sbjct: 926 EEKEKELTSLQQSEASNRKEARSKLKKFEWLSDEEAHFNKKGGLYDFEGYTVSKGKDEIK 985
Query: 936 SAHHQSGG-ERS--VSTILYLVSLQ----DLTNCPFRVVDEINQGMDPIN--ERKMFQQL 986
+ ERS + + L + + D+ N R+ ++ N I ++K +L
Sbjct: 986 ELTDKIETLERSCCIQNVSNLDTCEAKVLDIKNKRERITEDFNMLKKTIATLDKKKVDEL 1045
Query: 987 VRAASQPNTP--QCFLLTPKLLPDLEYS 1012
+RA N Q F LLPD S
Sbjct: 1046 IRAHESVNKDFGQIFNC---LLPDAHAS 1070
Score = 55 (24.4 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 160 KLSPVKL-LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
KL+ VK + +E + L V H EK+ IE TVK D +++K L +
Sbjct: 740 KLAQVKTNINNSEFGIVVRDLKV-HSEEYEKNQA--EIEATVKTLKDVEDKIKTLESMKN 796
Query: 219 KDV----ERVRQRAELLEKVE 235
KD +R ++ LL+K E
Sbjct: 797 KDKNSQEKRKKELTALLQKAE 817
Score = 51 (23.0 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKL-----TLRQCSDRLKDMEDKNNK 422
E G+ ++ E EK NQ ++ TL+ D++K +E NK
Sbjct: 752 EFGIVVRDLKVHSEEYEK--NQAEIEATVKTLKDVEDKIKTLESMKNK 797
Score = 40 (19.1 bits), Expect = 9.6e-08, Sum P(4) = 9.6e-08
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 359 QTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKE 396
QT A + +IE I +LG + NQ L KE
Sbjct: 242 QTCEAVKKSAKEIEDAKKGIEDLGEKFNQLDLDLKNKE 279
Score = 38 (18.4 bits), Expect = 9.6e-08, Sum P(4) = 9.6e-08
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 511 SNESSRKEPFQISEEMRALGISARLDQVFDAPHAVK--EVLISQFGLDSSYIGSKETDQK 568
S ++ +KE +I+++++ LG + D HA K E + +D+ + S + +
Sbjct: 449 SADNYQKEVDEINKQLQLLGFNIDADTE-KREHAAKLHESITKLKDMDTRLLNSYKDGRY 507
Query: 569 ADN 571
A N
Sbjct: 508 ALN 510
>UNIPROTKB|E9PD53 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0030261
"chromosome condensation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 EMBL:AC024221 HGNC:HGNC:14013
IPI:IPI00793575 ProteinModelPortal:E9PD53 SMR:E9PD53
Ensembl:ENST00000469762 UCSC:uc003fdi.3 ArrayExpress:E9PD53
Bgee:E9PD53 Uniprot:E9PD53
Length = 1263
Score = 138 (53.6 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 71/344 (20%), Positives = 154/344 (44%)
Query: 652 EDEAAKLQKEREEIINIV---QIE----KRKRREMENHINLRKRKLESIEKE-DDINTAL 703
+D+ K+ K+ +E + + Q+ R ++ ++ + +++++ EKE DD+ L
Sbjct: 878 QDKLDKINKQLDECASAITKAQVAIKTADRNLQKAQDSVLRTEKEIKDTEKEVDDLTAEL 937
Query: 704 AKLVDQAADL--NIQQFKYAI-EI----KNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 756
L D+AA++ N + ++ EI +NLL E+ + + ++ K+ +++
Sbjct: 938 KSLEDKAAEVVKNTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQID 997
Query: 757 FNLKQHEKLALQASLHYEDCKKEVEHCRKH-LSDAKRQAESIAFITPELEKEFLEMPTTI 815
++ +H + + Y KE+ H + D E I+ ++PE + E ++ P +I
Sbjct: 998 GHIAEHN-----SKIKY--WHKEISKISLHPIED--NPIEEISVLSPE-DLEAIKNPDSI 1047
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR--FLAEIDA 873
A ++ + N + EY+ ++ L E DK +R F +
Sbjct: 1048 TNQIALLEARCHEMKP----NLGAIAEYKKKEELY--LQRVAELDKITYERDSFRQAYED 1101
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQ 931
L+++ L I N+Q + + G+ L+ +S D F GI+ V+ +
Sbjct: 1102 LRKQRLNEFMAGFYIITNKLKENYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKSW 1160
Query: 932 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
++ + SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1161 KKIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1201
Score = 99 (39.9 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 50/217 (23%), Positives = 93/217 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 59 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 117
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E I+ I GD E + + R N S + +GK
Sbjct: 118 SVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSRTACRDNTSVYHISGK 177
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P K E ++ + + + C
Sbjct: 178 KKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP-KGQTEHDEGMLEYLEDIIGCG 236
Query: 186 LVEKSSKL--KTIECTVKRNGDTLNQLKALNVEQEKD 220
+ + K+ + +E + G+ LN++K VE+EKD
Sbjct: 237 RLNEPIKVLCRRVEILNEHRGEKLNRVKM--VEKEKD 271
Score = 86 (35.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 51/255 (20%), Positives = 109/255 (42%)
Query: 669 VQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA--ADLNIQQFKYAIEIKN 726
V+I R E N + + +++ +++E E +I L ++ ++ Q+ Y E++
Sbjct: 249 VEILNEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFRKKNHVCQY-YIYELQK 307
Query: 727 LLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKH 786
+ E+ + K EK I D K + N+ +E A + +D +K++ K
Sbjct: 308 RIAEMETQK----EK----IHEDTKEINEKSNILSNEMKAKNKDV--KDTEKKLNKITKF 357
Query: 787 LSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ---DNISQANSIFFLNQNILQEY 843
+ + K + + ++ ++ + ++LE +Q + + + SI + NI+ E
Sbjct: 358 IEENKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNNIINET 417
Query: 844 EHRQRQIEDLSTKQEADKKE----LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQE 899
R +E K+E KE LK+ + KE L +NE +R+ +
Sbjct: 418 TTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQKEKESREKELMGFSKSVNE--ARSKMD 475
Query: 900 MAVAG-EVSLDEHES 913
+A + ++ L H +
Sbjct: 476 VAQSELDIYLSRHNT 490
Score = 78 (32.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 50/228 (21%), Positives = 87/228 (38%)
Query: 99 GDTKEEHLTIMRKIDTRN--KSEWFFNGKVVPKG-EVLEITKRFNIQVNNLTQ--FLPQD 153
G E + R+++ N + E K+V K + LE K I+ L F ++
Sbjct: 236 GRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFRKKN 295
Query: 154 RVCEFAKLSPVKLLEETE---KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
VC++ K + E E + + + + + + S+++K VK LN++
Sbjct: 296 HVCQYYIYELQKRIAEMETQKEKIHEDTKEINEKSNI-LSNEMKAKNKDVKDTEKKLNKI 354
Query: 211 -KALNVEQEK----DVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXX 265
K + +EK D+E V+ R +L KK L+ D +K E
Sbjct: 355 TKFIEENKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNNII 414
Query: 266 XXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFL 313
N E K E KK K ++D ++ L E R + +
Sbjct: 415 NETTTRNNALEKEKEKEEKKL-KEVMDSLKQETQGLQKEKESREKELM 461
Score = 42 (19.8 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
I +L +I E+ Q ++++ + KE I ++ + + + KD++D KL
Sbjct: 302 IYELQKRIAEMETQ--KEKIHEDTKE-INEKSNILSNEMKAKNKDVKDTEKKL 351
Score = 41 (19.5 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLH--ALRN 429
EK LE VQ +K + K K L + ++ + K + K+N +++ RN
Sbjct: 363 EKFTQLDLE-DVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNNIINETTTRN 421
Query: 430 SGAE 433
+ E
Sbjct: 422 NALE 425
Score = 37 (18.1 bits), Expect = 9.1e-09, Sum P(3) = 9.1e-09
Identities = 9/41 (21%), Positives = 21/41 (51%)
Query: 278 SKPIEGKKQEKAILD---GDCKKLSSLINENSKRRMDFLEK 315
SK ++G+ +++ + K+ S + +SK+ M E+
Sbjct: 731 SKVMKGRMGSSLVIEISEEEVNKMESQLQNDSKKAMQIQEQ 771
>UNIPROTKB|I3LMC6 [details] [associations]
symbol:LOC100523938 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 OMA:NALVCET GeneTree:ENSGT00580000081569
EMBL:CU695116 EMBL:CU914655 Ensembl:ENSSSCT00000028659
Uniprot:I3LMC6
Length = 1235
Score = 122 (48.0 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ A+ ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLK 213
Score = 114 (45.2 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 77/391 (19%), Positives = 170/391 (43%)
Query: 652 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 703
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
L + + + + + NLL +CK + ++ D I + E + + +
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGSSQGED 961
Query: 764 KLA---LQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
++ ++++ + E+++ C + L QAE E+++E + + E
Sbjct: 962 SVSGSQRTSNIYAREALIEIDYGDLC-EDLKKPDAQAEE------EIKQEMNTLQQKLNE 1014
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK-- 875
++ +Q I N +++ E + + ++ S + EA +K K+ + +K
Sbjct: 1015 QQSVLQ-------RIAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE 1067
Query: 876 --EKWLPTLRNLVAQINETF---SRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQS 929
+++ ++ I+E + SRN A G + +E D + + K FR
Sbjct: 1068 RFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPM 1127
Query: 930 GQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRA 989
L SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++
Sbjct: 1128 DNL--------SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKE 1178
Query: 990 ASQPNTPQCFLLTPKLLPDLEYSEACSILNI 1020
S N Q +++ L + Y++A S++ +
Sbjct: 1179 QSTCNF-QAIVIS---LKEEFYTKAESLIGV 1205
Score = 98 (39.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 57/271 (21%), Positives = 118/271 (43%)
Query: 655 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 713
AA+ ++ ++E + ++ K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 714 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 773
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 774 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 833
+ K++E +K L +A++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 834 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 883
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 884 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 912
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 90 (36.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 770
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 771 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 826
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 827 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 913
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 86 (35.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 55/261 (21%), Positives = 118/261 (45%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 711 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 763
L Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 764 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 815
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 874
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 875 KEKWLPTLRNLVAQINETFSR 895
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 70 (29.7 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 649 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 705
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 706 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 744
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 745 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 801
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 802 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 861
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 862 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 921
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 922 IKVKFRQSGQLEVLSAHH 939
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 751 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 806
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 807 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 863
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 864 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 914
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 44 (20.5 bits), Expect = 6.4e-09, Sum P(4) = 6.4e-09
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 383 VQANQKRLQKSE------KEKILNQNKLT--LRQCSDRLKDMEDKNNKLLH-ALRNSGAE 433
++ NQKR++K E K+ + Q KL L + + K D+ NK L+ + G
Sbjct: 428 IEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDA 487
Query: 434 NIFEAYCWLQQHRHEL 449
I QQ + E+
Sbjct: 488 RIDRQESSRQQRKAEI 503
Score = 44 (20.5 bits), Expect = 6.4e-09, Sum P(4) = 6.4e-09
Identities = 20/93 (21%), Positives = 41/93 (44%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDMED 418
Y+ D++ + Q+ + N+ ++K KE K + ++K + + D LK+ +
Sbjct: 209 YQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Query: 419 KNNKLLHALRNSGAENIFEAYCWLQQHRHELNK 451
+ K++ + E I E L Q R + K
Sbjct: 269 ELGKMMREQQQIEKE-IKEKDSELNQKRPQYIK 300
Score = 43 (20.2 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 436
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 437 EAYCWLQQHRHELNK 451
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 40 (19.1 bits), Expect = 6.4e-09, Sum P(4) = 6.4e-09
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 490 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 550 -ISQFGLDSS 558
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 7.7e-09, Sum P(3) = 7.7e-09
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 428 RNSGAENIFEAYC 440
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
Score = 37 (18.1 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS---DRLKDMEDKNNKLL 424
+Q LG+Q + ++ Q E + ++ + T+++ ++LK E ++ K++
Sbjct: 812 NQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKII 863
>UNIPROTKB|Q9NTJ3 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IDA;TAS]
[GO:0007076 "mitotic chromosome condensation" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0000070 "mitotic sister
chromatid segregation" evidence=TAS] [GO:0005524 "ATP binding"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_115566 Reactome:REACT_21300
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0051301 EMBL:CH471052
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 eggNOG:COG1196 KO:K06675 SUPFAM:SSF75553
EMBL:AC024221 OMA:IAIEFLT EMBL:AB019987 EMBL:AL136877 EMBL:AL833949
EMBL:AF092564 IPI:IPI00328298 IPI:IPI00411559 PIR:T46486
RefSeq:NP_001002800.1 RefSeq:NP_005487.3 UniGene:Hs.58992
ProteinModelPortal:Q9NTJ3 SMR:Q9NTJ3 IntAct:Q9NTJ3
MINT:MINT-5005675 STRING:Q9NTJ3 PhosphoSite:Q9NTJ3 DMDM:30173386
PaxDb:Q9NTJ3 PeptideAtlas:Q9NTJ3 PRIDE:Q9NTJ3 DNASU:10051
Ensembl:ENST00000344722 Ensembl:ENST00000357388
Ensembl:ENST00000360111 Ensembl:ENST00000462787 GeneID:10051
KEGG:hsa:10051 UCSC:uc003fdh.3 UCSC:uc010hwd.3 CTD:10051
GeneCards:GC03P160117 HGNC:HGNC:14013 HPA:HPA018259 HPA:HPA029449
MIM:605575 neXtProt:NX_Q9NTJ3 PharmGKB:PA37834 HOGENOM:HOG000184777
HOVERGEN:HBG106696 InParanoid:Q9NTJ3 OrthoDB:EOG4PZJ5V
PhylomeDB:Q9NTJ3 GenomeRNAi:10051 NextBio:37969 ArrayExpress:Q9NTJ3
Bgee:Q9NTJ3 CleanEx:HS_SMC4 Genevestigator:Q9NTJ3
GermOnline:ENSG00000113810 Uniprot:Q9NTJ3
Length = 1288
Score = 138 (53.6 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 71/344 (20%), Positives = 154/344 (44%)
Query: 652 EDEAAKLQKEREEIINIV---QIE----KRKRREMENHINLRKRKLESIEKE-DDINTAL 703
+D+ K+ K+ +E + + Q+ R ++ ++ + +++++ EKE DD+ L
Sbjct: 903 QDKLDKINKQLDECASAITKAQVAIKTADRNLQKAQDSVLRTEKEIKDTEKEVDDLTAEL 962
Query: 704 AKLVDQAADL--NIQQFKYAI-EI----KNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 756
L D+AA++ N + ++ EI +NLL E+ + + ++ K+ +++
Sbjct: 963 KSLEDKAAEVVKNTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQID 1022
Query: 757 FNLKQHEKLALQASLHYEDCKKEVEHCRKH-LSDAKRQAESIAFITPELEKEFLEMPTTI 815
++ +H + + Y KE+ H + D E I+ ++PE + E ++ P +I
Sbjct: 1023 GHIAEHN-----SKIKY--WHKEISKISLHPIED--NPIEEISVLSPE-DLEAIKNPDSI 1072
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR--FLAEIDA 873
A ++ + N + EY+ ++ L E DK +R F +
Sbjct: 1073 TNQIALLEARCHEMKP----NLGAIAEYKKKEELY--LQRVAELDKITYERDSFRQAYED 1126
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQ 931
L+++ L I N+Q + + G+ L+ +S D F GI+ V+ +
Sbjct: 1127 LRKQRLNEFMAGFYIITNKLKENYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKSW 1185
Query: 932 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
++ + SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1186 KKIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1226
Score = 99 (39.9 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 50/217 (23%), Positives = 93/217 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 142
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E I+ I GD E + + R N S + +GK
Sbjct: 143 SVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSRTACRDNTSVYHISGK 202
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P K E ++ + + + C
Sbjct: 203 KKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP-KGQTEHDEGMLEYLEDIIGCG 261
Query: 186 LVEKSSKL--KTIECTVKRNGDTLNQLKALNVEQEKD 220
+ + K+ + +E + G+ LN++K VE+EKD
Sbjct: 262 RLNEPIKVLCRRVEILNEHRGEKLNRVKM--VEKEKD 296
Score = 86 (35.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 51/255 (20%), Positives = 109/255 (42%)
Query: 669 VQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA--ADLNIQQFKYAIEIKN 726
V+I R E N + + +++ +++E E +I L ++ ++ Q+ Y E++
Sbjct: 274 VEILNEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFRKKNHVCQY-YIYELQK 332
Query: 727 LLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKH 786
+ E+ + K EK I D K + N+ +E A + +D +K++ K
Sbjct: 333 RIAEMETQK----EK----IHEDTKEINEKSNILSNEMKAKNKDV--KDTEKKLNKITKF 382
Query: 787 LSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ---DNISQANSIFFLNQNILQEY 843
+ + K + + ++ ++ + ++LE +Q + + + SI + NI+ E
Sbjct: 383 IEENKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNNIINET 442
Query: 844 EHRQRQIEDLSTKQEADKKE----LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQE 899
R +E K+E KE LK+ + KE L +NE +R+ +
Sbjct: 443 TTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQKEKESREKELMGFSKSVNE--ARSKMD 500
Query: 900 MAVAG-EVSLDEHES 913
+A + ++ L H +
Sbjct: 501 VAQSELDIYLSRHNT 515
Score = 78 (32.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 50/228 (21%), Positives = 87/228 (38%)
Query: 99 GDTKEEHLTIMRKIDTRN--KSEWFFNGKVVPKG-EVLEITKRFNIQVNNLTQ--FLPQD 153
G E + R+++ N + E K+V K + LE K I+ L F ++
Sbjct: 261 GRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFRKKN 320
Query: 154 RVCEFAKLSPVKLLEETE---KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
VC++ K + E E + + + + + + S+++K VK LN++
Sbjct: 321 HVCQYYIYELQKRIAEMETQKEKIHEDTKEINEKSNI-LSNEMKAKNKDVKDTEKKLNKI 379
Query: 211 -KALNVEQEK----DVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXX 265
K + +EK D+E V+ R +L KK L+ D +K E
Sbjct: 380 TKFIEENKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNNII 439
Query: 266 XXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFL 313
N E K E KK K ++D ++ L E R + +
Sbjct: 440 NETTTRNNALEKEKEKEEKKL-KEVMDSLKQETQGLQKEKESREKELM 486
Score = 42 (19.8 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
I +L +I E+ Q ++++ + KE I ++ + + + KD++D KL
Sbjct: 327 IYELQKRIAEMETQ--KEKIHEDTKE-INEKSNILSNEMKAKNKDVKDTEKKL 376
Score = 41 (19.5 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLH--ALRN 429
EK LE VQ +K + K K L + ++ + K + K+N +++ RN
Sbjct: 388 EKFTQLDLE-DVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNNIINETTTRN 446
Query: 430 SGAE 433
+ E
Sbjct: 447 NALE 450
Score = 37 (18.1 bits), Expect = 9.7e-09, Sum P(3) = 9.7e-09
Identities = 9/41 (21%), Positives = 21/41 (51%)
Query: 278 SKPIEGKKQEKAILD---GDCKKLSSLINENSKRRMDFLEK 315
SK ++G+ +++ + K+ S + +SK+ M E+
Sbjct: 756 SKVMKGRMGSSLVIEISEEEVNKMESQLQNDSKKAMQIQEQ 796
>UNIPROTKB|Q5LNH7 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0003824 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K03529
RefSeq:YP_168431.1 ProteinModelPortal:Q5LNH7 GeneID:3194939
KEGG:sil:SPO3228 PATRIC:23379903 HOGENOM:HOG000036390 OMA:AHERVQA
ProtClustDB:CLSK864767 Uniprot:Q5LNH7
Length = 1151
Score = 140 (54.3 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 68/274 (24%), Positives = 122/274 (44%)
Query: 730 EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSD 789
E + + A +AS E K RE ++ +LA +A + E R+ +
Sbjct: 842 ETAEARRAEAADRLASGE--TKHREAALAEREAARLASEAREGRAAAEARAEAARETMQA 899
Query: 790 AKRQAESIAFITPE--LEKEFLE---MPTTIEELEAAIQDNISQANSIFFLNQNILQEYE 844
A + +TP L K +E MP + + LEA + + Q +++ +N ++
Sbjct: 900 AAERIAEEQQVTPNQLLSKLGVEPDAMPDS-DALEAEVNRHKRQRDAMGAVNLRAEEDAR 958
Query: 845 HRQRQIEDLSTKQEADKKE-LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVA 903
Q + + LS K+++D +E +K + I +L + L Q+N F+ F+ +
Sbjct: 959 EVQEEFDSLS-KEKSDLEEAVKTLRSGIASLNREGRERLLTAFEQVNSNFAMLFRHLFGG 1017
Query: 904 GEVSLDEHESDFDKFGILIKVKFRQSGQ-LEVLSAHHQSGGERSVSTILYLVSLQDLTN- 961
GE +L ESD D +++ + G+ L LS SGGE+++ T + L+ L N
Sbjct: 1018 GEANLVMVESD-DPLDAGLEIMCQPPGKKLSTLSL--LSGGEQTL-TAMALIFAVFLANP 1073
Query: 962 CPFRVVDEINQGMDPINERKMFQQLVRAASQPNT 995
P V+DE++ +D N + L Q +T
Sbjct: 1074 APICVLDEVDAPLDDANVTRFCDLLDEMCRQTDT 1107
Score = 97 (39.2 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 61/248 (24%), Positives = 96/248 (38%)
Query: 26 IELHNFMTF---DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGA 82
++L F +F LI G L ++GPNG GKS+L+ A+ +G + R +
Sbjct: 6 LKLTGFKSFVDPTDLIIADG--LTGIVGPNGCGKSNLLEALRWVMGENRPKAMRGGGMED 63
Query: 83 YVKRGEES----GYIKISLRGDTKE----------EHLTIMRKIDTRNKSEWFFNGKVVP 128
+ G S + +++L D E + L I+R+I S + NGK V
Sbjct: 64 VIFAGASSRPARNFAEVTLLMDNSERLAPSGFNDADQLEIVRRITRDVGSAYKANGKDVR 123
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQL-PVQHCALV 187
+V + + ++ + Q ++ E P E+A G L +H
Sbjct: 124 ARDVQILFADASTGAHS-PALVRQGQIAELINAKPTSRRRILEEAAGISGLYQRRH---- 178
Query: 188 EKSSKLKTIECTVKRNGDTLNQLK---ALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
E KLK E + R D L QL A Q + R R+ E L E W
Sbjct: 179 EAELKLKGTETNLTRVDDVLEQLGTQLAQLARQARQAARYREIGEQLRLAEGQLLYRRWR 238
Query: 245 KYDMKKAE 252
D +A+
Sbjct: 239 DADEARAK 246
Score = 60 (26.2 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKI-LNQNKLTLRQCSD----RLKDMEDKNNKL 423
D +E+LG+Q+ +L QA Q + E++ L + +L R+ D R K E ++
Sbjct: 196 DVLEQLGTQLAQLARQARQAARYREIGEQLRLAEGQLLYRRWRDADEARAKAEEVLRHRT 255
Query: 424 LHALRNSGAENIFEA 438
L A R A EA
Sbjct: 256 LDASRAEAAARQAEA 270
Score = 40 (19.1 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 645 QTEQRLIEDEAAKLQK-EREE 664
Q+ QRL+ED L + E EE
Sbjct: 399 QSAQRLVEDSRKTLARSEAEE 419
>TIGR_CMR|SPO_3228 [details] [associations]
symbol:SPO_3228 "SMC protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0003824 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K03529
RefSeq:YP_168431.1 ProteinModelPortal:Q5LNH7 GeneID:3194939
KEGG:sil:SPO3228 PATRIC:23379903 HOGENOM:HOG000036390 OMA:AHERVQA
ProtClustDB:CLSK864767 Uniprot:Q5LNH7
Length = 1151
Score = 140 (54.3 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 68/274 (24%), Positives = 122/274 (44%)
Query: 730 EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSD 789
E + + A +AS E K RE ++ +LA +A + E R+ +
Sbjct: 842 ETAEARRAEAADRLASGE--TKHREAALAEREAARLASEAREGRAAAEARAEAARETMQA 899
Query: 790 AKRQAESIAFITPE--LEKEFLE---MPTTIEELEAAIQDNISQANSIFFLNQNILQEYE 844
A + +TP L K +E MP + + LEA + + Q +++ +N ++
Sbjct: 900 AAERIAEEQQVTPNQLLSKLGVEPDAMPDS-DALEAEVNRHKRQRDAMGAVNLRAEEDAR 958
Query: 845 HRQRQIEDLSTKQEADKKE-LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVA 903
Q + + LS K+++D +E +K + I +L + L Q+N F+ F+ +
Sbjct: 959 EVQEEFDSLS-KEKSDLEEAVKTLRSGIASLNREGRERLLTAFEQVNSNFAMLFRHLFGG 1017
Query: 904 GEVSLDEHESDFDKFGILIKVKFRQSGQ-LEVLSAHHQSGGERSVSTILYLVSLQDLTN- 961
GE +L ESD D +++ + G+ L LS SGGE+++ T + L+ L N
Sbjct: 1018 GEANLVMVESD-DPLDAGLEIMCQPPGKKLSTLSL--LSGGEQTL-TAMALIFAVFLANP 1073
Query: 962 CPFRVVDEINQGMDPINERKMFQQLVRAASQPNT 995
P V+DE++ +D N + L Q +T
Sbjct: 1074 APICVLDEVDAPLDDANVTRFCDLLDEMCRQTDT 1107
Score = 97 (39.2 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 61/248 (24%), Positives = 96/248 (38%)
Query: 26 IELHNFMTF---DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGA 82
++L F +F LI G L ++GPNG GKS+L+ A+ +G + R +
Sbjct: 6 LKLTGFKSFVDPTDLIIADG--LTGIVGPNGCGKSNLLEALRWVMGENRPKAMRGGGMED 63
Query: 83 YVKRGEES----GYIKISLRGDTKE----------EHLTIMRKIDTRNKSEWFFNGKVVP 128
+ G S + +++L D E + L I+R+I S + NGK V
Sbjct: 64 VIFAGASSRPARNFAEVTLLMDNSERLAPSGFNDADQLEIVRRITRDVGSAYKANGKDVR 123
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQL-PVQHCALV 187
+V + + ++ + Q ++ E P E+A G L +H
Sbjct: 124 ARDVQILFADASTGAHS-PALVRQGQIAELINAKPTSRRRILEEAAGISGLYQRRH---- 178
Query: 188 EKSSKLKTIECTVKRNGDTLNQLK---ALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
E KLK E + R D L QL A Q + R R+ E L E W
Sbjct: 179 EAELKLKGTETNLTRVDDVLEQLGTQLAQLARQARQAARYREIGEQLRLAEGQLLYRRWR 238
Query: 245 KYDMKKAE 252
D +A+
Sbjct: 239 DADEARAK 246
Score = 60 (26.2 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKI-LNQNKLTLRQCSD----RLKDMEDKNNKL 423
D +E+LG+Q+ +L QA Q + E++ L + +L R+ D R K E ++
Sbjct: 196 DVLEQLGTQLAQLARQARQAARYREIGEQLRLAEGQLLYRRWRDADEARAKAEEVLRHRT 255
Query: 424 LHALRNSGAENIFEA 438
L A R A EA
Sbjct: 256 LDASRAEAAARQAEA 270
Score = 40 (19.1 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 645 QTEQRLIEDEAAKLQK-EREE 664
Q+ QRL+ED L + E EE
Sbjct: 399 QSAQRLVEDSRKTLARSEAEE 419
>POMBASE|SPBP4H10.06c [details] [associations]
symbol:cut14 "condensin complex subunit Cut14"
species:4896 "Schizosaccharomyces pombe" [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=ISM] [GO:0051304 "chromosome
separation" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 PomBase:SPBP4H10.06c Pfam:PF02463 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0051301 EMBL:CU329671
GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0016887 GO:GO:0006310
GO:GO:0007076 GO:GO:0000939 GO:GO:0000796 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9
HOGENOM:HOG000163792 EMBL:D30787 PIR:S51623 RefSeq:NP_596180.1
ProteinModelPortal:P41003 IntAct:P41003 STRING:P41003
EnsemblFungi:SPBP4H10.06c.1 GeneID:2541319 KEGG:spo:SPBP4H10.06c
OMA:GTALEIC OrthoDB:EOG4P2T9B NextBio:20802429 GO:GO:0034500
Uniprot:P41003
Length = 1172
Score = 130 (50.8 bits), Expect = 4.7e-09, Sum P(4) = 4.7e-09
Identities = 74/334 (22%), Positives = 135/334 (40%)
Query: 653 DEAAKLQKEREEIINIVQIE-KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
DE + ++ E N V++E ++ E++NH ++ L ++ E T+L K + A
Sbjct: 807 DEFTPILEKSENDYNGVKLECEQLEGELQNH----QQSL--VQGES--TTSLIKT--EIA 856
Query: 712 DLNIQQFKYAIEIKNL--LVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 769
+L + K L L+EI S K+S K + S+ K E E N + +L +Q
Sbjct: 857 ELELSLVNEEHNRKKLTELIEIESAKFSGLNKEIDSLSTSMKTFESEIN---NGELTIQK 913
Query: 770 SLH-YEDCKKE-------VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
H ++ ++E + H K Q + + M E+L
Sbjct: 914 LNHEFDRLEREKSVAITAINHLEKENDWIDGQKQHFGKQGTIFDFHSQNMRQCREQLHNL 973
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
S +I +++ E ++ ++ + DKK+++ + ID K
Sbjct: 974 KPRFASMRKAINPKVMDMIDGVEKKEAKLRSMIKTIHRDKKKIQDTVKSIDRFKRS---A 1030
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQS 941
L ++N +F F E+ L E+ G+ I VK G + S S
Sbjct: 1031 LEKTWREVNSSFGEIFDELLPGNSAELQPPENKEFTDGLEIHVKI---GSIWKDSLAELS 1087
Query: 942 GGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
GG+RS+ + ++SL P ++DEI+ +D
Sbjct: 1088 GGQRSLVALALIMSLLKYKPAPMYILDEIDAALD 1121
Score = 106 (42.4 bits), Expect = 4.7e-09, Sum P(4) = 4.7e-09
Identities = 55/269 (20%), Positives = 106/269 (39%)
Query: 44 RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYV-KRGEESGYIKISL----- 97
+ N + G NGSGKS+++ AI LG RA ++ + KRG+ +G + S+
Sbjct: 26 QFNAITGLNGSGKSNILDAICFVLGITNMSTVRAQNLQDLIYKRGQ-AGITRASVTIVFN 84
Query: 98 -RGDTK-----EEH--LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQF 149
R E H +++ R+I S++ NG + V + + + +NN
Sbjct: 85 NRDPASSPIGFENHPQVSVTRQIIMGGTSKYLINGHRALQQNVQNLFQSVQLNINNPNFL 144
Query: 150 LPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQ 209
+ Q R+ + + ++L E+A G + K +T++ + + +N
Sbjct: 145 IMQGRITKVLNMKATEILSMIEEASGTRMFEER------KEKAFRTMQ-RKEAKVEEINT 197
Query: 210 LKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXX 269
L L E E + ++R + + + + L L + +Y
Sbjct: 198 L--LREEIEPRLTKLRTEKKTFLEYQHIYNDLERLSHLCTAYDYYKLSLKVEELTVQASQ 255
Query: 270 XXNTLHEFSKPIEGKKQEKAILDGDCKKL 298
+ + E ++ KQE IL KK+
Sbjct: 256 KHSHIAEMESSLQTSKQEVLILKEKIKKI 284
Score = 91 (37.1 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 54/246 (21%), Positives = 110/246 (44%)
Query: 689 KLESIEKEDDI----NTALAKLVDQAAD--LNIQQFKYAIEIKNLLVEIVSCKWSYAEKH 742
KL+S+ + D+ T V+++A L IQ+ ++++K +++V+ ++ E
Sbjct: 647 KLKSVTLDGDVYDPSGTLTGGSVNKSAGPLLQIQKLN-SLQLK---LQVVTSEYEKLETQ 702
Query: 743 MASIEF-DAKIRELE--FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAF 799
+ ++ +A LE LKQHE L + + + +++ D K + +
Sbjct: 703 LKDLKTQNANFHRLEQEIQLKQHELTLLIEQRETDSSFRLLSDYQQYKDDVKDLKQRL-- 760
Query: 800 ITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEA 859
PEL++ L+ I+++E +Q+ S + +Y+H+ + + K E
Sbjct: 761 --PELDRLILQSDQAIKKIERDMQEWKHNKGSKMAELEKEFNQYKHKLDEFTPILEKSEN 818
Query: 860 DKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFG 919
D +K E + L+ + ++LV Q T S E+A E+SL E + K
Sbjct: 819 DYNGVK---LECEQLEGELQNHQQSLV-QGESTTSLIKTEIAEL-ELSLVNEEHNRKKLT 873
Query: 920 ILIKVK 925
LI+++
Sbjct: 874 ELIEIE 879
Score = 66 (28.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 373 KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 419
KL ++ EL VQA+QK +E E L +K + +++K +ED+
Sbjct: 241 KLSLKVEELTVQASQKHSHIAEMESSLQTSKQEVLILKEKIKKIEDE 287
Score = 60 (26.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 24/96 (25%), Positives = 54/96 (56%)
Query: 164 VKLLEETEKAVGDPQLPVQHCALVEKS--SKLKTIECTVKRNGDTLNQLKALNVEQEK-D 220
V +L+E K + D ++ Q +++ S+L+T+ + R ++ +LK +E+E D
Sbjct: 274 VLILKEKIKKIEDERMR-QMSVSSDRTLDSQLQTVNENITRISTSI-ELKNTALEEEHGD 331
Query: 221 VERVRQRAELLEKV-ESMKKKLPWLK--YDMKKAEY 253
++++R +A+ LE + +K+L + Y+ +K E+
Sbjct: 332 LQQIRGKAKELETLLRGKRKRLDEVLSVYEKRKDEH 367
Score = 57 (25.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 33/185 (17%), Positives = 85/185 (45%)
Query: 69 GDTQLL-GRATSIGAYVKRGEESGYIKI-SLRGDTKEEHLTIMRKIDTRNKSEWFFN--- 123
GD Q + G+A + + RG+ ++ S+ K+EH +I + D +++ E +
Sbjct: 330 GDLQQIRGKAKELETLL-RGKRKRLDEVLSVYEKRKDEHQSISK--DFKSQEELISSLTT 386
Query: 124 GKVVPKGEVLEITKRFNIQVNNLTQFLPQDRV--CEFAKLSPVKLLEETEKAVGDPQLPV 181
G +G +++ + + L F + + L+ L + +KA +
Sbjct: 387 GLSTTEGHETGYSRKLHEARDTLNDFKAEKETNRLKLEGLNKQISLTKPKKAEATKRCDQ 446
Query: 182 QHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + + ++ ++ ++K +T + + +V Q+K + + R LL +++++K KL
Sbjct: 447 LNREIDILQNHVEKLKMSLK---NTNSDITGEDVLQQKLKQLAKDRGNLLNELDALKSKL 503
Query: 242 PWLKY 246
++++
Sbjct: 504 AYMEF 508
Score = 45 (20.9 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 14/56 (25%), Positives = 31/56 (55%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINL-RKRKLE--SIEKE 696
++ + +E+E LQ+ R + + + + KR+ ++ +++ KRK E SI K+
Sbjct: 318 IELKNTALEEEHGDLQQIRGKAKELETLLRGKRKRLDEVLSVYEKRKDEHQSISKD 373
Score = 42 (19.8 bits), Expect = 4.7e-09, Sum P(4) = 4.7e-09
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 275 HEFSKPIEGKKQE-KAILDGDCKKLSSLINENSKRR 309
H + I GK +E + +L G K+L +++ KR+
Sbjct: 329 HGDLQQIRGKAKELETLLRGKRKRLDEVLSVYEKRK 364
Score = 42 (19.8 bits), Expect = 4.7e-09, Sum P(4) = 4.7e-09
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS-DRLKDMED-KNNKLLHALRN 429
EK+G+Q+L+ G N KR + I+ NK+T S +R+ + NNK AL
Sbjct: 559 EKIGAQLLQKG---NLKR-----RVTIIPLNKITSFVASAERVGAAKKISNNKAQLALEL 610
Query: 430 SGAEN 434
G ++
Sbjct: 611 IGYDD 615
Score = 38 (18.4 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 19/82 (23%), Positives = 40/82 (48%)
Query: 370 KIEKLGSQILELGVQANQ-KRLQKSEKE-KILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
+I+KL S L+L V ++ ++L+ K+ K N N L Q +++ K ++L +
Sbjct: 678 QIQKLNSLQLKLQVVTSEYEKLETQLKDLKTQNANFHRLEQ------EIQLKQHELTLLI 731
Query: 428 RNSGAENIFEAYCWLQQHRHEL 449
++ F QQ++ ++
Sbjct: 732 EQRETDSSFRLLSDYQQYKDDV 753
>UNIPROTKB|F6V533 [details] [associations]
symbol:SMC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00580000081569 EMBL:AAEX03007228
EMBL:AAEX03007229 EMBL:AAEX03007230 Ensembl:ENSCAFT00000001296
Uniprot:F6V533
Length = 1079
Score = 132 (51.5 bits), Expect = 5.6e-09, Sum P(3) = 5.6e-09
Identities = 69/300 (23%), Positives = 127/300 (42%)
Query: 21 GNIIEIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
G + + + NF ++ H + P R +IGPNGSGKS+++ A++ +G T L R +
Sbjct: 2 GRLEVLLVENFKSWRGHQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTANL-RVKN 60
Query: 80 I-----GAYVKRG-EESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVL 133
I GA++ R S +KI ++ EE T R I SE+ F+ V + +
Sbjct: 61 IQELIHGAHIGRPVSSSASVKIVYVEESGEEK-TFTRII-RGGCSEFHFDDNPVSRSAYI 118
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
++ I V + Q V + P + + E+ +L ++ EK KL
Sbjct: 119 AELEKIGIIVKARNCLVFQGTVESISMKKPKERTQFFEEISTSGELIGEY---EEKKRKL 175
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE--KVESMKKKLPWLKYDMKKA 251
+ E + N + + A + + E + LLE K+ ++ +L L ++ KK
Sbjct: 176 QKAEEDAQFNFNKKKNVAAERKHAKLEKEEAERYQSLLEELKMNKIQLQLFQLYHNEKKI 235
Query: 252 EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAIL-------DGDCKKLSSLINE 304
++ + HE ++ KK+E +L + + K L +L+N+
Sbjct: 236 HFLNTELEHVSRNLSVTKESLSRHE--NTVKAKKKEHGMLTRQLQQTEKELKSLEALLNQ 293
Score = 91 (37.1 bits), Expect = 5.6e-09, Sum P(3) = 5.6e-09
Identities = 78/393 (19%), Positives = 171/393 (43%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIE---KRKRREMEN-HINLR--KRKLESIEKED- 697
+ E + + D A+L +E ++++ I++ E K+ + ++ H L+ + +LE I+K+
Sbjct: 668 EKEIKNLRDRRAQLIQELKDLMKILRKEADLKQIQTLVQGTHTRLKYSQSELEMIKKKQL 727
Query: 698 ----DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMA--SIEFDAK 751
+ L+ L + L I E+ E+V + S +K + ++ D K
Sbjct: 728 AAFYRASYELSYLDFRVRKLKIDGCSLRKEVGKWQKEVVIIQTSLEQKRLEKHNLLLDCK 787
Query: 752 IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM 811
++++E L L SL + + E E + + D + E+I L + L++
Sbjct: 788 VQDIEIIL-------LLGSLD-DIIEVEAESTQATV-DIYEKEEAIEIDYSSLRDD-LKV 837
Query: 812 PTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 871
E L +I + A + ++ R+ E+ T EA KKE + E
Sbjct: 838 S---ERLVNSINRDTEGATILQHPGCGPSASHQTRKYGRENRCTAFEASKKEARMCRQEF 894
Query: 872 DALKEK----WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFR 927
+ +K++ + ++ I+E + + + ++ +S + E + + GI
Sbjct: 895 EQVKKRRYDLFSQCFEHVSISIDEIYKKLCRNVSAQAFLSPENPEEPYLE-GISYNCV-- 951
Query: 928 QSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLV 987
G+ + + SGGE+ V+ + L ++ PF V+DE++ +D N K+ +
Sbjct: 952 APGK-RFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKV-SSYI 1009
Query: 988 RAASQPNTPQCFLLTPKLLPDLEYSEACSILNI 1020
+ +Q Q +++ L + YS+A +++ +
Sbjct: 1010 KEQTQEQF-QMIIIS---LKEEFYSKADALIGV 1038
Score = 66 (28.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 48/242 (19%), Positives = 103/242 (42%)
Query: 646 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAK 705
T++ L E K++E + Q+++ ++ L +++ + I+ +++ + L K
Sbjct: 252 TKESLSRHENTVKAKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIKAKENTSHHLKK 311
Query: 706 LVDQAA----DLNIQQFKYAIEIKNLLVEIVSCK--WSYAEKHMASIEFDAKIRELEFNL 759
L D A D Q K +IK L E+V W EK + E K R++E
Sbjct: 312 L-DVAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQVEE-EILHKGRDIELEA 369
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRKHLS----DAKRQAESIAFITPELEKEFLEMPTTI 815
Q ++ L E +K+V + L + K E +AF E + E+ +
Sbjct: 370 SQLDRYK---GLK-EQVRKKVAIMTQQLEKLHWEQKADKERLAF---ERRRHG-EVQENL 421
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
++++ I+D+ + + + + + +++Q E L + E K + E++ ++
Sbjct: 422 KQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVGEIENTKSRMSEVNEELNLIR 481
Query: 876 EK 877
+
Sbjct: 482 SE 483
Score = 56 (24.8 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 33/140 (23%), Positives = 58/140 (41%)
Query: 691 ESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSY-AEKHMASIEFD 749
E + K DI ++L D+ L +Q + + I +E W A+K + E
Sbjct: 357 EILHKGRDIELEASQL-DRYKGLK-EQVRKKVAIMTQQLE--KLHWEQKADKERLAFE-R 411
Query: 750 AKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFL 809
+ E++ NLKQ ++ E ++ + C L + K+Q E++ E+E
Sbjct: 412 RRHGEVQENLKQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLV---GEIENTKS 468
Query: 810 EMPTTIEELEAAIQDNISQA 829
M EEL I+ + A
Sbjct: 469 RMSEVNEELNL-IRSELQNA 487
Score = 51 (23.0 bits), Expect = 5.6e-09, Sum P(3) = 5.6e-09
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 364 YEPPHDKIEKLGSQILELG-VQANQKRLQKS---EKEKILNQNKLTLRQCSDRLKDMEDK 419
+E DK E+L + G VQ N K++++ K++I + T + C D LK+ + +
Sbjct: 398 WEQKADK-ERLAFERRRHGEVQENLKQIKEQIEDHKKRIEKLEEYT-KTCMDCLKEKKQQ 455
Query: 420 NNKLLHALRNS 430
L+ + N+
Sbjct: 456 EETLVGEIENT 466
Score = 37 (18.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 15/67 (22%), Positives = 30/67 (44%)
Query: 360 TVPAYEPPHD----KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD 415
TV A + H ++++ ++ L NQKR Q + ++ + + L +KD
Sbjct: 262 TVKAKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIKAKENTSHHLKKLDVAKKSIKD 321
Query: 416 MEDKNNK 422
E + +K
Sbjct: 322 SEKQCSK 328
>CGD|CAL0001080 [details] [associations]
symbol:SMC1 species:5476 "Candida albicans" [GO:0034990
"nuclear mitotic cohesin complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0000217 "DNA secondary structure
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0001080
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
EMBL:AACQ01000091 EMBL:AACQ01000090 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06636 RefSeq:XP_715092.1 RefSeq:XP_715143.1
ProteinModelPortal:Q5A021 SMR:Q5A021 STRING:Q5A021 GeneID:3643221
GeneID:3643229 KEGG:cal:CaO19.11845 KEGG:cal:CaO19.4367
Uniprot:Q5A021
Length = 1240
Score = 121 (47.7 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 61/250 (24%), Positives = 107/250 (42%)
Query: 21 GNIIEIELHNFMTFD--HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRAT 78
G +I +EL NF ++ +I S +IGPNG+GKS+++ AI+ LG ++ L R+
Sbjct: 2 GRLIGLELFNFKSYKGKSIIGFGSSYFTSIIGPNGAGKSNMMDAISFVLGVNSYHL-RSQ 60
Query: 79 SIGAYVKRGEE-----------------SGYIKISLRGDTKEEHLTIMRKIDTRNKSEWF 121
++ + RG S Y+ + D E L + R I S++
Sbjct: 61 NLKDLIYRGRRNIDTDSTTLDAIEQDPTSAYVMATYEKDDGEI-LKLKRTITASGNSDYQ 119
Query: 122 FNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPV 181
NG+ V + K+ NI + + Q V A +P L + E G +
Sbjct: 120 INGQSVTMLNYSMVLKQENILIKARNFLVFQGDVETIASQNPKDLTKLIETISGSNEYIN 179
Query: 182 QHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK-K 240
++ L E+ K + +V TLN EQ + + ++ ++ K +++KK
Sbjct: 180 EYERLKEEHEKAHELTTSVFSRKRTLNSESKQYKEQMAEQRQFEEK--IITKNDTVKKIN 237
Query: 241 LPWLKYDMKK 250
L L ++ KK
Sbjct: 238 LYKLFHNEKK 247
Score = 109 (43.4 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 78/359 (21%), Positives = 161/359 (44%)
Query: 652 EDEAAKLQKEREEIIN--IVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 709
E E K K+R + I IV +E ++ + +K+ ES++K + L + Q
Sbjct: 842 EKERLKETKDRRKSIESLIVDLED----DLAKVLTEKKKLEESLDKAEAEYEVLQTEISQ 897
Query: 710 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE-FNLKQHEKLALQ 768
D Q K + I++ L + S S K + IE + + E N+ ++ K+
Sbjct: 898 FDDSMQSQLKTSKSIESDLDDSKSLV-STLVKEITQIEENLLKTDSERANVLRNCKIQ-N 955
Query: 769 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM-PTTIE-ELEAAIQDNI 826
+L D + ++L + ++ I LE+ F E+ ++ ELE +Q+ I
Sbjct: 956 INLPLIDGDLDSISVGENLESSIKEVYKIELDYEMLEERFKEVFNNKLQSELEVILQNTI 1015
Query: 827 SQANSIFFLNQNI--LQEYEHRQRQIE-DLSTKQEADKKELKRFLAEIDALKEKWLPTLR 883
S + + I L+E E + R + + + ++ +++ +RF + +K++
Sbjct: 1016 SDLEKLTPNAKAIERLREVETKLRNYDKEYNVARQKERQVNERFKKVQEKRYDKFMDAFN 1075
Query: 884 NLVAQINETFSRNFQE-MAVAGE---VSLDEHESDF---DKFGILIKVK-FRQSGQLEVL 935
++ I+ + + M+ G ++L++ +S F K+ + +K FR +E+L
Sbjct: 1076 HISGCIDSIYKELTKSAMSPLGGSAYLTLEDEDSPFLSGIKYHAMPPMKRFRD---MELL 1132
Query: 936 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPN 994
S GGE++++ + L ++ PF V+DEI+ +D N ++ + + A PN
Sbjct: 1133 S-----GGEKTMAALALLFAIHSYQPSPFFVLDEIDAALDNANVARIGNYIKKYAG-PN 1185
Score = 76 (31.8 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 49/269 (18%), Positives = 118/269 (43%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQI--EKRKRREMENHINLRKRKLESIEKE--DDINTA 702
EQR E++ + + + IN+ ++ ++K ++++ I + +L+ +KE + T
Sbjct: 218 EQRQFEEKIIT-KNDTVKKINLYKLFHNEKKHNQLKDEIKSKNEELKLAKKELSNKEKTY 276
Query: 703 LAKLVDQAAD-LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 761
+ + D ++ LN ++ K E ++ + E + S+ +L+
Sbjct: 277 KSIMTDYSSSVLNAKKQKQQTEAAQQKIDSTKRELIPVEANQRSLSNKINFHKLKVG-DL 335
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQ-AESIAF---ITPELEKEFLEMPTTI-- 815
+ +A Q + ++++ ++ D + + A ++A I+PE +KE+ E+ +
Sbjct: 336 VKDIARQKT-QVSSVERQLRDAQRMFDDFQAKIAAAVASSTNISPEAQKEYEELRSKFLA 394
Query: 816 ---EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEAD-KKELKRFLAEI 871
ELE I ++ +S+ N+ + + + +I +L + D K +L EI
Sbjct: 395 ENGSELEEQISLLLNNKDSLNSAKSNLENQKTNAEHRIAELESIVATDLKSKLHDVSNEI 454
Query: 872 DALKEKWLPTLRNLVAQINETFSRNFQEM 900
+ + +K + A I + N +E+
Sbjct: 455 NEVLDKKSDKVEARNALIKQKDEFNHEEL 483
Score = 66 (28.3 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 53/258 (20%), Positives = 109/258 (42%)
Query: 657 KLQKER-EEI-INIVQIE----KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
KLQ++R +++ IN++ E K + N +R ++ E E + T L K D++
Sbjct: 705 KLQEKRPKDLEINLLAEEIGALDDKLPVLRNQKTSIERIIKDRESEIEFQTGLFKGFDKS 764
Query: 711 ADLNIQQF-KYAIEIKNLLVEIVSCK----WSYAEKH--MASIEFDAKIRELEFNLKQHE 763
+ + K +I + ++ S K + EK+ + IE + ++ E
Sbjct: 765 IQEKMNEITKINGKIDKVNEKMKSSKDLIFAEFCEKYGFVNGIEDYENMHGSTLRVRAKE 824
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
+ ++ K + E ++ L + K + +SI + +LE + ++ T ++LE
Sbjct: 825 RAQFSKTISVLQNKLDFE--KERLKETKDRRKSIESLIVDLEDDLAKVLTEKKKLE---- 878
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 883
+++ +A + EYE Q +I ++ K K +++D K + TL
Sbjct: 879 ESLDKAEA----------EYEVLQTEISQFDDSMQSQLKTSKSIESDLDDSKSL-VSTLV 927
Query: 884 NLVAQINETFSRNFQEMA 901
+ QI E + E A
Sbjct: 928 KEITQIEENLLKTDSERA 945
Score = 46 (21.3 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 368 HDKIE---KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQ 408
H++++ +L +++L A+Q+R +S K+K L +N TL++
Sbjct: 480 HEELKLNTRLRDVLVKLDELASQQR--ESNKQKKLRENVATLKR 521
>MGI|MGI:1917349 [details] [associations]
symbol:Smc4 "structural maintenance of chromosomes 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000796 "condensin complex" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=ISO] [GO:0010032
"meiotic chromosome condensation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IEA] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0051383 "kinetochore organization" evidence=IMP]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 MGI:MGI:1917349
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0051301 GO:GO:0006281 GO:GO:0006310 GO:GO:0046982
GO:GO:0045132 GO:GO:0007076 GO:GO:0051383 GO:GO:0000796
GO:GO:0010032 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 PDB:3L51
PDBsum:3L51 OMA:IAIEFLT CTD:10051 HOGENOM:HOG000184777
HOVERGEN:HBG106696 OrthoDB:EOG4PZJ5V EMBL:AJ534940 EMBL:BC005507
EMBL:BC062939 EMBL:AK088350 EMBL:AK088846 IPI:IPI00229397
RefSeq:NP_598547.1 UniGene:Mm.206841 ProteinModelPortal:Q8CG47
SMR:Q8CG47 STRING:Q8CG47 PhosphoSite:Q8CG47 PaxDb:Q8CG47
PRIDE:Q8CG47 Ensembl:ENSMUST00000042901 GeneID:70099 KEGG:mmu:70099
UCSC:uc008pma.1 InParanoid:Q8CG47 ChiTaRS:SMC4
EvolutionaryTrace:Q8CG47 NextBio:330998 Bgee:Q8CG47 CleanEx:MM_SMC4
Genevestigator:Q8CG47 GermOnline:ENSMUSG00000034349 Uniprot:Q8CG47
Length = 1286
Score = 135 (52.6 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 65/321 (20%), Positives = 147/321 (45%)
Query: 669 VQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL--NIQQFKYAI-EI 724
++ R ++ ++ + +++++ EKE +D+ T L + D+A ++ N + + ++ EI
Sbjct: 925 IKTADRNLKKAQDSVCRTEKEIKDTEKEINDLKTELKNIEDKAEEVINNTKTAETSLPEI 984
Query: 725 ----KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEV 780
+NLL E+ + + ++ K+ +++ ++ +H + + Y +KE+
Sbjct: 985 QKEHRNLLQELKVIQENEHALQKDALSIKLKLEQIDGHISEHN-----SKIKY--WQKEI 1037
Query: 781 EHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNIL 840
+ H + E++A ++ E E E ++ P +I A ++ + N +
Sbjct: 1038 SKIKLHPVE-DNPVETVAVLSQE-ELEAIKNPESITNEIALLEAQCREMKP----NLGAI 1091
Query: 841 QEYEHRQRQIEDLSTKQ--EADK--KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRN 896
EY+ + EDL ++ E DK E F + L+++ L I N
Sbjct: 1092 AEYKKK----EDLYLQRVAELDKITSERDNFRQAYEDLRKQRLNEFMAGFYVITNKLKEN 1147
Query: 897 FQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLV 954
+Q + + G+ L+ +S D F GI+ V+ + ++ + SGGE+++S++ +
Sbjct: 1148 YQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKSWKKIFNL---SGGEKTLSSLALVF 1203
Query: 955 SLQDLTNCPFRVVDEINQGMD 975
+L P +DEI+ +D
Sbjct: 1204 ALHHYKPTPLYFMDEIDAALD 1224
Score = 96 (38.9 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 55/239 (23%), Positives = 102/239 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ + P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 82 ITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 140
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E I+ I GD E + + R + S + +GK
Sbjct: 141 SVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVLPNSNFYVSRTAYRDSTSVYHISGK 200
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P K E ++ + + + C
Sbjct: 201 KKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP-KGQTEHDEGMLEYLEDIIGCG 259
Query: 186 LVEKSSKL--KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLEKVESMKKK 240
+ + K+ + +E + G+ LN++K VE+EKD +E + A E L M KK
Sbjct: 260 RLNEPIKVLCRRVEILNEHRGEKLNRVKM--VEKEKDALEGEKNIAIEFLTLENEMFKK 316
Score = 92 (37.4 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 53/255 (20%), Positives = 113/255 (44%)
Query: 669 VQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADL--NIQQFKYAIEIKN 726
V+I R E N + + +++ +++E E +I L ++ +I Q+ Y +++N
Sbjct: 272 VEILNEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEMFKKKNHICQY-YIYDLQN 330
Query: 727 LLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKH 786
+ EI + K EK I D K + N+ +E A +++ +D +K++ K
Sbjct: 331 RIAEITTQK----EK----IHEDTKEITEKSNVLSNEMKAKNSAV--KDVEKKLNKVTKF 380
Query: 787 LSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ---DNISQANSIFFLNQNILQEY 843
+ K + + ++ ++ + ++LE +Q + + + S+ ++ ++ E
Sbjct: 381 IEQNKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSVPAKSKTVINET 440
Query: 844 EHRQRQIEDLSTKQEADKKELKRFLA-EIDAL-KEKWLPT--LRNLVAQINETFSRNFQE 899
R +E K+E KE+ L E L KEK + L +NE +R+ E
Sbjct: 441 TTRNNSLEKEREKEEKKLKEVMDSLKQETQGLQKEKEIQEKELMGFNKSVNE--ARSKME 498
Query: 900 MAVAG-EVSLDEHES 913
+A + ++ L H +
Sbjct: 499 VAQSELDIYLSRHNT 513
Score = 92 (37.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 31/174 (17%), Positives = 82/174 (47%)
Query: 660 KEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQAADLNIQQF 718
KE E + ++++++ +E ++++ K++ +++ EK + + +L + D+N ++
Sbjct: 838 KELEANVLTTAPDRKQQKLLEENVSVFKKEYDAVAEKAGKVEAEIKRLHNTIIDINNRKL 897
Query: 719 K-YAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 777
K ++ + ++ C + + +A D +++ + ++ + EK D K
Sbjct: 898 KAQQNKLDTINKQLDECASAITKAQVAIKTADRNLKKAQDSVCRTEKEIKDTEKEINDLK 957
Query: 778 KEVEHCRKHLSDAKRQAESIAFITPELEKE---FLEMPTTIEELEAAIQ-DNIS 827
E+++ + ++ PE++KE L+ I+E E A+Q D +S
Sbjct: 958 TELKNIEDKAEEVINNTKTAETSLPEIQKEHRNLLQELKVIQENEHALQKDALS 1011
Score = 84 (34.6 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 38/184 (20%), Positives = 86/184 (46%)
Query: 647 EQRLIEDEAAKLQKEREEIINIV-QIEKRKRREMENHINLRKRKLESIE-KEDDINTALA 704
+Q+L+E+ + +KE + + ++E +R I++ RKL++ + K D IN
Sbjct: 853 QQKLLEENVSVFKKEYDAVAEKAGKVEAEIKRLHNTIIDINNRKLKAQQNKLDTIN---- 908
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 764
K +D+ A I + + AI+ + ++ EK + E +I +L+ LK E
Sbjct: 909 KQLDECASA-ITKAQVAIKTADRNLKKAQDSVCRTEKEIKDTE--KEINDLKTELKNIED 965
Query: 765 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 824
A + + + + + +K + ++ + I L+K+ L + +E+++ I +
Sbjct: 966 KAEEVINNTKTAETSLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQIDGHISE 1025
Query: 825 NISQ 828
+ S+
Sbjct: 1026 HNSK 1029
Score = 73 (30.8 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 35/155 (22%), Positives = 71/155 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL 161
K+ H+ D +N+ K + EIT++ N+ N + + E KL
Sbjct: 316 KKNHICQYYIYDLQNRIAEITTQKEKIHEDTKEITEKSNVLSNEMKAKNSAVKDVE-KKL 374
Query: 162 SPV-KLLEETEKAVGDPQLPVQHCALVEK----SSKLKTIECTVKRNGDTLNQLKALNVE 216
+ V K +E+ ++ QL ++ + EK +SK K +E ++++ + + +LK++ +
Sbjct: 375 NKVTKFIEQNKEKF--TQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSVPAK 432
Query: 217 QEKDVERVRQRAELLEKV-ESMKKKLPWLKYDMKK 250
+ + R LEK E +KKL + +K+
Sbjct: 433 SKTVINETTTRNNSLEKEREKEEKKLKEVMDSLKQ 467
Score = 65 (27.9 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 28/114 (24%), Positives = 58/114 (50%)
Query: 142 QVNNLTQFLPQDRVCEFAKLS--PVKLLEETEKAVGDPQ-LPVQHCALVEKSSKLKTIEC 198
++N +T+F+ Q++ +F +L V++ E+ + A + L Q EK +LK++
Sbjct: 373 KLNKVTKFIEQNKE-KFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSVPA 431
Query: 199 TVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
K +N+ N EK ER ++ +L E ++S+K++ L+ + + E
Sbjct: 432 KSKT---VINETTTRNNSLEK--EREKEEKKLKEVMDSLKQETQGLQKEKEIQE 480
Score = 51 (23.0 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRA--------ELLEKVES 236
AL+ S LK + +K L Q + E+EK+++++ Q +L +KVE
Sbjct: 524 ALITASETLKERKAAIKDINTKLPQTQQELKEKEKELQKLTQEEINLKSLVHDLFQKVEE 583
Query: 237 MKKKL 241
K L
Sbjct: 584 AKSSL 588
Score = 45 (20.9 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 272 NTLHEFSKPIEGKKQEKAILDGDCKKLSS--LINENSKRRMDFLEK 315
NTL +F+ I+G +++ L K+L + L +++ LE+
Sbjct: 814 NTLEKFAASIQGLSEQEEYLCVQIKELEANVLTTAPDRKQQKLLEE 859
Score = 45 (20.9 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLT--LRQCSDRLKDMEDKNNKL 423
I L ++I E+ Q ++++ + KE N L+ ++ + +KD+E K NK+
Sbjct: 325 IYDLQNRIAEITTQ--KEKIHEDTKEITEKSNVLSNEMKAKNSAVKDVEKKLNKV 377
Score = 45 (20.9 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 39/186 (20%), Positives = 79/186 (42%)
Query: 74 LGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPK-GEV 132
L ATS +++ + K+ + T++ + TRN S K K EV
Sbjct: 402 LKHATSKAKKLEKQLQKDKEKVEELKSVPAKSKTVINETTTRNNSLEKEREKEEKKLKEV 461
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAK-LSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
++ K+ Q + + + + F K ++ + E ++ D L +H V + S
Sbjct: 462 MDSLKQ-ETQGLQKEKEIQEKELMGFNKSVNEARSKMEVAQSELDIYLS-RHNTAVSQLS 519
Query: 192 KLKTIECTVKRNGDTLNQLKA----LNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
K K T +TL + KA +N + + + ++++ + L+K+ + L L +D
Sbjct: 520 KAKEALITAS---ETLKERKAAIKDINTKLPQTQQELKEKEKELQKLTQEEINLKSLVHD 576
Query: 248 M-KKAE 252
+ +K E
Sbjct: 577 LFQKVE 582
Score = 44 (20.5 bits), Expect = 7.9e-09, Sum P(3) = 7.9e-09
Identities = 28/101 (27%), Positives = 45/101 (44%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
+++ K+ SQ+ QA Q + QK + E+ + + LR S+R DM + K +++
Sbjct: 772 EEVNKMESQLERHSKQAMQIQEQKVQHEEAV----VKLRH-SER--DMRNTLEKFAASIQ 824
Query: 429 NSGAENIFEAYCWLQQHRHELNKEAYGP-----VLLEVNVS 464
+ E Y +Q E N P LLE NVS
Sbjct: 825 GLSEQ---EEYLCVQIKELEANVLTTAPDRKQQKLLEENVS 862
Score = 39 (18.8 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLK 414
+K+E+L S + N+ + + EK + + L++ D LK
Sbjct: 421 EKVEELKSVPAKSKTVINETTTRNNSLEKEREKEEKKLKEVMDSLK 466
>UNIPROTKB|E2RCX4 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 EMBL:AAEX03017331 RefSeq:XP_535848.2
Ensembl:ENSCAFT00000022729 GeneID:478679 KEGG:cfa:478679
Uniprot:E2RCX4
Length = 1288
Score = 129 (50.5 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 69/343 (20%), Positives = 152/343 (44%)
Query: 652 EDEAAKLQKEREEIINIV---QIE----KRKRREMENHINLRKRKLESIEKE-DDINTAL 703
+D+ K+ K+ +E + + Q+ R ++ ++ + + +++ EKE D+ L
Sbjct: 903 QDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDSVFRTEEEIKDTEKEVKDLTAEL 962
Query: 704 AKLVDQAADL--NIQQFKYAI-EI----KNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 756
+ D+AA++ N + ++ EI +NLL E+ + + ++ K+ +++
Sbjct: 963 KSVEDKAAEVYQNTTAAEESLPEIQKEHRNLLQELKIIQENEHALQKDALSIKLKLEQID 1022
Query: 757 FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 816
++ +H + + Y +KE+ H + E IA ++PE + E ++ P +I
Sbjct: 1023 GHIAEHN-----SKIKY--WQKEIGKISLHPIE-NNPLEEIAVLSPE-DLEAIKNPDSIT 1073
Query: 817 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR--FLAEIDAL 874
A ++ + N + EY+ ++ L E DK +R F + L
Sbjct: 1074 NQIALLEAQCHEMKP----NLGAIAEYKKKEELY--LQRVAELDKITCERDHFRQAYEDL 1127
Query: 875 KEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQL 932
+++ L I N+Q + + G+ L+ +S D F GI+ V+ +
Sbjct: 1128 RKQRLNEFMAGFYIITNKLKENYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKSWK 1186
Query: 933 EVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
++ + SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1187 KIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1226
Score = 99 (39.9 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 90/425 (21%), Positives = 164/425 (38%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 142
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E I+ I GD E + + R N S + +GK
Sbjct: 143 SVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSRTAYRDNTSVYHISGK 202
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P E E + + +
Sbjct: 203 KTTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSGR 262
Query: 186 LVEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLE-KVESMKKKL 241
L E L + +E + G+ LN++K VE+EKD +E + A E L + E +KK
Sbjct: 263 LNEPIKILCRRVEILNEHRGEKLNRVKL--VEKEKDALEGEKNIAIEFLTLENEIFRKKN 320
Query: 242 PWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL 301
+Y YI +HE +K I K +IL + K +
Sbjct: 321 HVCQY------YIYDLQKRIAEMETQK---EKIHEDTKEINEKS---SILSNEMKAKNKA 368
Query: 302 INENSKRRMDFLEKVDXXXXXXXXKY-KXXXXXXXXXXXXXXXILKARXXXXXXXXXXQT 360
+ + K+ L K+ K+ + KA+ +
Sbjct: 369 VKDVEKK----LNKITKFIEENKQKFTQLDLEDVQVREKLKHASSKAKKLEKQLQKDKEK 424
Query: 361 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL-KDMEDK 419
V ++ K EK+ I E+ + + +K ++EK L + +L+Q + L ++ E +
Sbjct: 425 VEEFKSIPAKSEKI---ITEMTTRNSALEKEKEKEEKKLKEVMDSLKQETQGLQREKESR 481
Query: 420 NNKLL 424
+L+
Sbjct: 482 EKELM 486
Score = 90 (36.7 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRK-RREMENHINLRKRKLESIEKEDDINTA 702
M T +E E K +K+ +E+++ ++ E + +RE E+ R+++L K +N A
Sbjct: 442 MTTRNSALEKEKEKEEKKLKEVMDSLKQETQGLQREKES----REKELMGFSKS--VNEA 495
Query: 703 LAKL-VDQAA-DLNIQQFKYAIEIKNLLVE-IVSCKWSYAEKHMASIEFDAKIRELEFNL 759
+K+ V Q+ D+ + + A+ N E +++ + E+ A + +AK+ + E L
Sbjct: 496 RSKMDVAQSELDIYLSRHNTAVSQLNKAKEALIAASETLKERKAAIRDIEAKLPQSELEL 555
Query: 760 KQHEKLALQASLHYEDCK 777
K+ EK LQ L E+ K
Sbjct: 556 KEKEK-ELQ-ELTQEEIK 571
Score = 82 (33.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 58/332 (17%), Positives = 152/332 (45%)
Query: 656 AKLQKEREEIINIVQIEKRKRREMENHINLRKRK-LESIEKEDDINTALAKLVDQAADLN 714
+K+ K R +V+I + + ME+ + +K L+ E++ + A+ KL ++
Sbjct: 756 SKVMKGRMGSSVVVEISEEEVNRMESQLQRDSQKALQIQEQKVQLEEAVVKLRHNEREMR 815
Query: 715 --IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL-EFNLK----QHEKLAL 767
+++F +I+ + E ++ + E ++ + D K ++L E N+ +++ +A
Sbjct: 816 NTLEKFTASIQRLSEQEEYLNIQVKELEANVLATAPDKKKQKLLEENVSVFKTEYDNVAE 875
Query: 768 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD--- 824
+A + K+ + + +++ K +A+ ++ K+ E + I + + AI+
Sbjct: 876 RAGKVEAEVKR-LHNTIVEINNHKLKAQQDKL--DKINKQLDECASAITKAQVAIKTADR 932
Query: 825 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL-- 882
N+ +A F + +E + +++++DL+ + ++ + + A +E LP +
Sbjct: 933 NLKKAQDSVFRTE---EEIKDTEKEVKDLTAELKSVEDKAAEVYQNTTAAEES-LPEIQK 988
Query: 883 --RNLVAQIN--ETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAH 938
RNL+ ++ + Q+ A++ ++ L++ + + K+K+ Q ++ +S H
Sbjct: 989 EHRNLLQELKIIQENEHALQKDALSIKLKLEQIDGHIAEHNS--KIKYWQK-EIGKISLH 1045
Query: 939 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEI 970
+L L+ + N P + ++I
Sbjct: 1046 PIENNPLEEIAVLSPEDLEAIKN-PDSITNQI 1076
Score = 71 (30.1 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 75/343 (21%), Positives = 130/343 (37%)
Query: 99 GDTKEEHLTIMRKIDTRN--KSEWFFNGKVVPKG-EVLEITKRFNIQVNNLTQ--FLPQD 153
G E + R+++ N + E K+V K + LE K I+ L F ++
Sbjct: 261 GRLNEPIKILCRRVEILNEHRGEKLNRVKLVEKEKDALEGEKNIAIEFLTLENEIFRKKN 320
Query: 154 RVCEFAKLSPVKLLEETE---KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
VC++ K + E E + + + + + + S+++K VK LN++
Sbjct: 321 HVCQYYIYDLQKRIAEMETQKEKIHEDTKEINEKSSI-LSNEMKAKNKAVKDVEKKLNKI 379
Query: 211 -KALNVEQEK----DVERVRQRAELLEKVESMKKKLP-WLKYDMKKAEYIXXXXXXXXXX 264
K + ++K D+E V+ R E L+ S KKL L+ D +K E
Sbjct: 380 TKFIEENKQKFTQLDLEDVQVR-EKLKHASSKAKKLEKQLQKDKEKVEEFKSIPAKSEKI 438
Query: 265 XXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRR---MDFLEKVDXXXX 321
N+ E K E KK K ++D ++ L E R M F + V+
Sbjct: 439 ITEMTTRNSALEKEKEKEEKKL-KEVMDSLKQETQGLQREKESREKELMGFSKSVNEARS 497
Query: 322 XXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIE-KLGSQILE 380
+ KA+ +T+ + IE KL LE
Sbjct: 498 KMDVAQSELDIYLSRHNTAVSQLNKAKEALIAAS---ETLKERKAAIRDIEAKLPQSELE 554
Query: 381 LGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
L + +K LQ+ +E+I + K +R D + +E+ + L
Sbjct: 555 L--KEKEKELQELTQEEI--KLKGLVR---DLFQKVEEAKSSL 590
>CGD|CAL0003745 [details] [associations]
symbol:SMC4 species:5476 "Candida albicans" [GO:0032116 "SMC
loading complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000939 "condensed chromosome inner kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000799
"nuclear condensin complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0070058 "tRNA gene clustering" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0003745
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 EMBL:AACQ01000063
EMBL:AACQ01000062 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 RefSeq:XP_716802.1 RefSeq:XP_716862.1
ProteinModelPortal:Q5A4Y2 STRING:Q5A4Y2 GeneID:3641522
GeneID:3641578 KEGG:cal:CaO19.8579 KEGG:cal:CaO19.964
Uniprot:Q5A4Y2
Length = 1368
Score = 118 (46.6 bits), Expect = 8.8e-09, Sum P(3) = 8.8e-09
Identities = 74/301 (24%), Positives = 122/301 (40%)
Query: 43 SRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEES-GYIKISL---- 97
S + V+GPNGSGKS+++ ++ G + + G++ Y ++ +
Sbjct: 171 SSFSAVVGPNGSGKSNVIDSMLFVFGFRASKMRQGKLSELIHNSGDQRPDYCQVDIHFQM 230
Query: 98 ---------RGDT-KEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLT 147
+ D + L I RK N+S ++ NGK EV + K I +++
Sbjct: 231 VVDDLVVPQKADVVPDSELIISRKAFRNNQSSYYINGKTSSYSEVTTLLKNKGIDLDHKR 290
Query: 148 QFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL 207
+ Q V A++ P + EK D L +V S K IE ++ R D L
Sbjct: 291 FLILQGEVESIAQMKP-----KAEKENDDGLLEYLE-DIVGTSKYKKLIEDSIVRI-DEL 343
Query: 208 NQ--LKALN----VEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXX 261
N L+ N VE++KD+ ++ E L +E ++KKL K + E
Sbjct: 344 NDICLEKANRFDLVEKDKDLLE-EKKVEALRFLE-LEKKLINCKSVQFQIEISAHQKRIA 401
Query: 262 XXXXXXXXXXNTLHE---FSKPI-EGKKQEKAI---LDGDCKKLSSLINENSKRRMDFLE 314
L E +K I EG + E + ++ D K LS+ I+ K R D +
Sbjct: 402 AKQAEADAIEKELEENKESNKEILEGIESELSTQKEIERDIKVLSAEIDSLGKNRKDISK 461
Query: 315 K 315
K
Sbjct: 462 K 462
Score = 114 (45.2 bits), Expect = 8.8e-09, Sum P(3) = 8.8e-09
Identities = 70/327 (21%), Positives = 150/327 (45%)
Query: 657 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADL--N 714
++ + + I ++ ++ E+E IN ++R L + K +++N+ L +L D+ D N
Sbjct: 1007 EINRHTKLIESLTTEQEEAEAELEK-INEQQRSL--LSKLEEVNSKLKELEDERNDKEDN 1063
Query: 715 IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYE 774
+++ K+ +E K + K+ E IE K+ + + LK K A++ +
Sbjct: 1064 LEKMKHDLEEKQDQIN----KFKSVE-----IELLNKLEKCKGTLKGL-KQAIEQNKEEL 1113
Query: 775 DCK--KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI 832
D ++VE L + +++ + A I E++ ++ +E + + I++ + ++
Sbjct: 1114 DALVIRDVEPYISWLDETEQKKYNGALIDTLSEEDIADVD--LEAVTSEIEELENYMANV 1171
Query: 833 FFLNQNILQEYEHRQRQIEDLST--KQEADKKELKRFLAEIDALKEKWLPTLRNLVAQIN 890
++ IL+EY + + D + Q +++ K+ D LK K L I+
Sbjct: 1172 K-VDIEILKEYGAKIVEYNDKKSDLNQAVAERDSKKNYC--DDLKRKRLDEFMVGFNTIS 1228
Query: 891 ETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQLEVLSAHHQSGGERSVS 948
T ++ + + G L+ +S D F GIL V + + + SGGE+++S
Sbjct: 1229 MTLKDMYRMITMGGNAELELVDS-LDPFSEGILFSVMPPKKSWKNISNL---SGGEKTLS 1284
Query: 949 TILYLVSLQDLTNCPFRVVDEINQGMD 975
++ + +L P V+DEI+ +D
Sbjct: 1285 SLALVFALHKYKPTPLYVMDEIDAALD 1311
Score = 100 (40.3 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 42/216 (19%), Positives = 100/216 (46%)
Query: 658 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAAD---- 712
L E++E+ I + +++++E + N +++L S EKE +++ A ++ +Q +
Sbjct: 899 LVSEKKEVTQICKNLIAEQQKLEEN-NPFEQQLLSKEKELEELVNAKTQIKEQMSGFEQK 957
Query: 713 LNIQQFKY----AIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ 768
+++ + K +E+K ++ S K + H + +++LE + +H KL
Sbjct: 958 ISVLEQKIMDVGGVELKVQSSKVDSIKQQISIIHEKTSGDRMTVKKLENEINRHTKLIES 1017
Query: 769 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ 828
+ E+ + E+E + + E + ELE E + +E+++ +++ Q
Sbjct: 1018 LTTEQEEAEAELEKINEQQRSLLSKLEEVNSKLKELEDERNDKEDNLEKMKHDLEEKQDQ 1077
Query: 829 ANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKEL 864
N + +L + E + ++ L E +K+EL
Sbjct: 1078 INKFKSVEIELLNKLEKCKGTLKGLKQAIEQNKEEL 1113
Score = 86 (35.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 56/264 (21%), Positives = 114/264 (43%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
M T+ + +E+E ++ + E I ++ + + E E I+ K ++S+ E T +
Sbjct: 850 MNTKLQEMENEFEQMNSDYNEKIAMLNKLQVLKPETEFAISRLKLDIQSLVSEKKEVTQI 909
Query: 704 AK-LVDQAADLNIQQ-FKYAIEIKNL-LVEIVSCKWSYAEKHMASIE-----FDAKIR-- 753
K L+ + L F+ + K L E+V+ K E+ M+ E + KI
Sbjct: 910 CKNLIAEQQKLEENNPFEQQLLSKEKELEELVNAKTQIKEQ-MSGFEQKISVLEQKIMDV 968
Query: 754 ---ELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 810
EL+ + + + Q S+ +E + +K ++ R + I +T E E+ E
Sbjct: 969 GGVELKVQSSKVDSIKQQISIIHEKTSGDRMTVKKLENEINRHTKLIESLTTEQEEAEAE 1028
Query: 811 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLA- 869
+ I E + ++ + + NS + + E ++ +E + E + ++ +F +
Sbjct: 1029 LEK-INEQQRSLLSKLEEVNSKL---KELEDERNDKEDNLEKMKHDLEEKQDQINKFKSV 1084
Query: 870 EIDALK--EKWLPTLRNLVAQINE 891
EI+ L EK TL+ L I +
Sbjct: 1085 EIELLNKLEKCKGTLKGLKQAIEQ 1108
Score = 81 (33.6 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 47/255 (18%), Positives = 109/255 (42%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI---------EKED 697
E E + +KE EE++N K + E I++ ++K+ + K D
Sbjct: 922 ENNPFEQQLLSKEKELEELVNAKTQIKEQMSGFEQKISVLEQKIMDVGGVELKVQSSKVD 981
Query: 698 DINTALAKLVDQAAD--LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL 755
I ++ + ++ + + +++ + I L+E ++ + AE + I + + R L
Sbjct: 982 SIKQQISIIHEKTSGDRMTVKKLENEINRHTKLIESLTTEQEEAEAELEKI--NEQQRSL 1039
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 815
L++ + D + +E + L + + Q + EL + + T+
Sbjct: 1040 LSKLEEVNSKLKELEDERNDKEDNLEKMKHDLEEKQDQINKFKSVEIELLNKLEKCKGTL 1099
Query: 816 EELEAAIQDNISQANSIFFLNQ----NILQEYEHRQRQ---IEDLSTKQEADKKELKRFL 868
+ L+ AI+ N + +++ + + L E E ++ I+ LS + AD +L+
Sbjct: 1100 KGLKQAIEQNKEELDALVIRDVEPYISWLDETEQKKYNGALIDTLSEEDIADV-DLEAVT 1158
Query: 869 AEIDALKEKWLPTLR 883
+EI+ L E ++ ++
Sbjct: 1159 SEIEEL-ENYMANVK 1172
Score = 72 (30.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 43/212 (20%), Positives = 94/212 (44%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-----EKEDD 698
+ TEQ E E K+ +++ +++ ++ K +E+E+ N ++ LE + EK+D
Sbjct: 1018 LTTEQEEAEAELEKINEQQRSLLSKLEEVNSKLKELEDERNDKEDNLEKMKHDLEEKQDQ 1077
Query: 699 INTALAKLVDQAADLN-----IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR 753
IN + ++ L ++ K AIE +N E+ + E +++ ++ +
Sbjct: 1078 INKFKSVEIELLNKLEKCKGTLKGLKQAIE-QNK-EELDALVIRDVEPYISWLD---ETE 1132
Query: 754 ELEFNLKQHEKLALQ--ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM 811
+ ++N + L+ + A + E E+E ++++ K E I E + +E
Sbjct: 1133 QKKYNGALIDTLSEEDIADVDLEAVTSEIEELENYMANVKVDIE----ILKEYGAKIVEY 1188
Query: 812 PTTIEELEAAIQDNISQANSIFFLNQNILQEY 843
+L A+ + S+ N L + L E+
Sbjct: 1189 NDKKSDLNQAVAERDSKKNYCDDLKRKRLDEF 1220
Score = 65 (27.9 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 40/176 (22%), Positives = 73/176 (41%)
Query: 787 LSDAKRQAESIAFITPELEK---EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEY 843
LSD+ + A ELEK + EM E++ + + I+ N + L
Sbjct: 831 LSDSSNSNDQ-AITADELEKMNTKLQEMENEFEQMNSDYNEKIAMLNKLQVLKPETEFAI 889
Query: 844 EHRQRQIEDLSTKQEADKKELKRFLAEIDAL------------KEKWLPTLRNLVAQINE 891
+ I+ L ++++ + K +AE L KEK L L N QI E
Sbjct: 890 SRLKLDIQSLVSEKKEVTQICKNLIAEQQKLEENNPFEQQLLSKEKELEELVNAKTQIKE 949
Query: 892 TFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQL--EVLSAHHQSGGER 945
S F++ ++S+ E + D G+ +KV+ + + ++ H ++ G+R
Sbjct: 950 QMS-GFEQ-----KISVLEQKI-MDVGGVELKVQSSKVDSIKQQISIIHEKTSGDR 998
Score = 46 (21.3 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQ-IEKR------KRREMENHINLRKRKLESIEKE 696
++TE+ + D + L ++ E +Q ++K K +E EN I L + +E + +
Sbjct: 519 LETEEARLNDIRSSLTEKTSEFTKEIQSLQKSLDPWDSKLKEKENEIKLAESAIEILRSQ 578
Score = 44 (20.5 bits), Expect = 8.8e-09, Sum P(3) = 8.8e-09
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQ 401
D++EK+ +++ E+ + Q +EK +LN+
Sbjct: 845 DELEKMNTKLQEMENEFEQMNSDYNEKIAMLNK 877
>ZFIN|ZDB-GENE-020419-21 [details] [associations]
symbol:smc4 "structural maintenance of chromosomes
4" species:7955 "Danio rerio" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-020419-21 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 KO:K06675
SUPFAM:SSF75553 CTD:10051 HOGENOM:HOG000184777 HOVERGEN:HBG106696
HSSP:Q9X0R4 EMBL:AY099521 IPI:IPI00504040 RefSeq:NP_775360.1
UniGene:Dr.77769 ProteinModelPortal:Q8JGS5 STRING:Q8JGS5
PRIDE:Q8JGS5 GeneID:192332 KEGG:dre:192332 InParanoid:Q8JGS5
NextBio:20797168 ArrayExpress:Q8JGS5 Bgee:Q8JGS5 Uniprot:Q8JGS5
Length = 1289
Score = 117 (46.2 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 65/322 (20%), Positives = 150/322 (46%)
Query: 674 RKRREMENHINLRKRKLESIEK-EDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIV 732
R ++ E+ ++ ++++ EK +++ L KL +QA ++ +Q A + L E+
Sbjct: 931 RNLKKSEDGVSRLEQEISENEKLMEELTEQLKKLEEQAGEI-MQSTSSA---EKALPEV- 985
Query: 733 SCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYED-----CKKEVEHCRKHL 787
++H A ++ ++E E L Q E L+++ + + D C +++H +K
Sbjct: 986 ------QDQHRAVVQEIKALQEQEHAL-QKEFLSVRLKVEHIDTAITECHNKIKHWQKEA 1038
Query: 788 SDAKRQ------AESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN-SIFFLNQNIL 840
S AE + + P+ + + + P I+ A ++D + ++ + +
Sbjct: 1039 SKLCLHHIDGVPAEELPALNPD-QLQDIGNPDVIKNEIALLEDRCANMKPNLGAIAEFKK 1097
Query: 841 QE--YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQIN---ETFSR 895
+E Y R +++D++T++++ K+ + D K++ L +A N
Sbjct: 1098 KEELYLQRVAELDDITTQRDSFKRGCE------DLRKQR----LHEFMAGFNIITNKLKE 1147
Query: 896 NFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYL 953
N+Q + + G+ L+ +S D F GI+ V+ + ++ ++ SGGE+++S++ +
Sbjct: 1148 NYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKSWKKI---YNLSGGEKTLSSLALV 1203
Query: 954 VSLQDLTNCPFRVVDEINQGMD 975
+L P +DEI+ +D
Sbjct: 1204 FALHHFKPTPLYFMDEIDAALD 1225
Score = 102 (41.0 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 54/237 (22%), Positives = 102/237 (43%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLL-GRATS 79
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + + S
Sbjct: 83 ITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLS 142
Query: 80 IGAYVKRGE---ESGYIKISLR------GDT----KEEHLTIMRKIDTRNKSEWFFNGKV 126
+ + G +S +++ + GD + + R N S ++ N K
Sbjct: 143 VLIHSSDGHPDIQSCTVEVHFQKIIDKEGDDYDVIPDSSFYVARTAGKDNSSAYYINTKK 202
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
+V + + I +++ + Q V + A + P E E + + + C L
Sbjct: 203 ATFKDVGTLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSCRL 262
Query: 187 VEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLEKVESMKKK 240
E + L + +E ++ G+ LN++K VE+EK +E + +A + L + KK
Sbjct: 263 KEPINILCRRVEALNEQRGEKLNRVKM--VEKEKSALEGEKNKAVDFLNLENDIFKK 317
Score = 98 (39.6 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 65/268 (24%), Positives = 120/268 (44%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTA 702
+Q + + + D++++L +E + ++ ++K ++ +I +K K ++ +D ++
Sbjct: 343 IQEDTKDLSDKSSQLTEEMKSKNEDLKAVEKKLTKLTKYIESQKEKFTQLDLQDVEVREK 402
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQ 761
L + L Q K + L E+ S +EK + E A+ ELE L +
Sbjct: 403 LKHTKSKTKKLQKQLQKD----QEKLEEVRGVPAS-SEKIIT--EASAQKEELEKKKLLE 455
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
+KLA E K+E K L D K + E EL K E + ++ ++
Sbjct: 456 EQKLAEVM----ESLKEET----KGLQDDKEKKEKELL---ELSKSVNETRSRMDVAQSE 504
Query: 822 IQDNISQANS-IFFLNQ--NILQE----YEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
+ +SQ N+ I LNQ + LQE R+ I+DL K A +++LK+ E++ +
Sbjct: 505 LDIYLSQHNTAINQLNQAKSALQETVDTLRERRAAIKDLQVKIPAQEEQLKKDERELEQI 564
Query: 875 KEKWLPT------LRNLVAQINETFSRN 896
E+ T +R VA+ + S N
Sbjct: 565 SEQDKQTRAQVGDMRQKVAEAKSSLSSN 592
Score = 69 (29.3 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 72/337 (21%), Positives = 130/337 (38%)
Query: 103 EEHLTIM-RKIDTRN--KSEWFFNGKVVPKGE-VLEITKRFNIQVNNLTQ--FLPQDRVC 156
+E + I+ R+++ N + E K+V K + LE K + NL F ++ +C
Sbjct: 263 KEPINILCRRVEALNEQRGEKLNRVKMVEKEKSALEGEKNKAVDFLNLENDIFKKRNLLC 322
Query: 157 EFA--KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL----KTIECTVKRNGDTLNQL 210
F L ++E EK Q+ L +KSS+L K+ +K L +L
Sbjct: 323 HFYVHDLQSRVSVKEAEKQ----QIQEDTKDLSDKSSQLTEEMKSKNEDLKAVEKKLTKL 378
Query: 211 -KALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXX 269
K + ++EK + Q E+ EK++ K K L+ ++K +
Sbjct: 379 TKYIESQKEKFTQLDLQDVEVREKLKHTKSKTKKLQKQLQKDQ-----EKLEEVRGVPAS 433
Query: 270 XXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDXXXXXXXXKYKX 329
+ E S E +++K + + ++ + E +K D EK +
Sbjct: 434 SEKIITEASAQKEELEKKKLLEEQKLAEVMESLKEETKGLQDDKEKKEKELLELSKSVNE 493
Query: 330 XXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQ--ANQ 387
L Q A + D + + + I +L V+ A +
Sbjct: 494 TRSRMDVAQSELDIYLSQHNTAINQLN--QAKSALQETVDTLRERRAAIKDLQVKIPAQE 551
Query: 388 KRLQKSEKE--KILNQNKLTLRQCSD-RLKDMEDKNN 421
++L+K E+E +I Q+K T Q D R K E K++
Sbjct: 552 EQLKKDERELEQISEQDKQTRAQVGDMRQKVAEAKSS 588
Score = 56 (24.8 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 387 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAY 439
Q++L K E LN+ L+ C R +E+K +K LR+ +N E Y
Sbjct: 772 QEQLDKMESA--LNKEVTQLQDCQKRKNQLEEKVHKARCELRDM--KNTLEKY 820
Score = 39 (18.8 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 6/27 (22%), Positives = 16/27 (59%)
Query: 407 RQCSDRLKDMEDKNNKLLHALRNSGAE 433
+Q + KD+ DK+++L +++ +
Sbjct: 341 QQIQEDTKDLSDKSSQLTEEMKSKNED 367
Score = 39 (18.8 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 390 LQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
++++EK++I K + S ++M+ KN L
Sbjct: 335 VKEAEKQQIQEDTKDLSDKSSQLTEEMKSKNEDL 368
>TIGR_CMR|BA_3986 [details] [associations]
symbol:BA_3986 "chromosome segregation SMC protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
OMA:CQNGKIP HOGENOM:HOG000036392 KO:K03529 TIGRFAMs:TIGR02168
HSSP:Q9X0R4 RefSeq:NP_846228.1 RefSeq:YP_020625.1
RefSeq:YP_029950.1 ProteinModelPortal:Q81WI9 IntAct:Q81WI9
DNASU:1086762 EnsemblBacteria:EBBACT00000012710
EnsemblBacteria:EBBACT00000015269 EnsemblBacteria:EBBACT00000024406
GeneID:1086762 GeneID:2817444 GeneID:2848221 KEGG:ban:BA_3986
KEGG:bar:GBAA_3986 KEGG:bat:BAS3699 ProtClustDB:CLSK873325
BioCyc:BANT260799:GJAJ-3757-MONOMER
BioCyc:BANT261594:GJ7F-3874-MONOMER Uniprot:Q81WI9
Length = 1189
Score = 134 (52.2 bits), Expect = 9.7e-09, Sum P(3) = 9.7e-09
Identities = 84/358 (23%), Positives = 158/358 (44%)
Query: 657 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNI 715
K+QKE E+ ++ EK++R + N +K K+E + KE ++ + L K + A L
Sbjct: 808 KVQKEMTEL-KVLAAEKQQR--LSN----QKEKVERLTKEKEETDATLVKTKEDLAFLKQ 860
Query: 716 QQFKYAI---EIKNLLVEIVSCKWSYAE----KHMASIEFDAKIRELEFNLKQ---HEKL 765
+ + +I N++ + + +E + + ++ +LE NLK+ K
Sbjct: 861 EMTSNSSGEEQITNMIEKKAYDRNQTSELIRSRREQRVSLQERVEQLERNLKETTGKHKY 920
Query: 766 ALQASLHYEDCK-----KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
L+ L ++ K E+E+ +HL R+ +I+F +L K + MP +
Sbjct: 921 ILEM-LKDQEVKINRLDVELENRLQHL----RETYTISFEAAKL-KYTMMMPAEDARKKV 974
Query: 821 A-IQDNISQANSIFFLNQNILQEYEH-RQRQIEDLSTKQEAD--KKELKRFLAEIDA-LK 875
I+ +I + ++ N + EYE +R L K + + K L + + E+D +K
Sbjct: 975 KLIKLSIEELGTV---NLGAIDEYERVAERHTFLLEQKDDLEEAKTTLHQLITEMDEEMK 1031
Query: 876 EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEV 934
+++ T + + FS E+ G L + D GI I V +L+
Sbjct: 1032 KRFSTTFEGIRMEFQSVFS----ELFGGGRADLVMTNPEDLLNTGIDI-VAQPPGKKLQN 1086
Query: 935 LSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 992
L SGGER+++ I L + + PF V+DE+ +D N + Q L + + +
Sbjct: 1087 LGL--LSGGERALTAIALLFGILKVRPVPFCVLDEVEAALDEANVARFAQYLKKFSDE 1142
Score = 84 (34.6 bits), Expect = 9.7e-09, Sum P(3) = 9.7e-09
Identities = 48/228 (21%), Positives = 101/228 (44%)
Query: 26 IELHNFMTFDHLICK---PGSRLNLVIGPNGSGKSSLVCAIALALGGDT--QLLG-RATS 79
+E+ F +F + PG + V+GPNGSGKS++ AI LG + L G +
Sbjct: 6 LEIAGFKSFAERVSVDFVPG--VTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAKMED 63
Query: 80 I---GAYVKRGEESGYIKISLRGDTKE---EH--LTIMRKIDTRNKSEWFFNGKVVPKGE 131
I G+ +R + I+L + + E+ + + R++ S+++ N + +
Sbjct: 64 IIFAGSDTRRAVNVAEVTITLNNEDQRLPIEYNEVCVTRRVSRSGDSDFYINKQSCRLKD 123
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
++++ + + Q +V E + E+A G + ++ + S
Sbjct: 124 IIDLFMDSGMG-REAFSIISQGKVEEILSSKSEERRGVFEEAAGVLKYKLRK---KKAES 179
Query: 192 KLKTIECTVKRNGDTLNQLKAL--NVEQEKDVER-VRQRAELLEKVES 236
KL + + R D +++L + +E++ + + ++ E LEKVE+
Sbjct: 180 KLADTQENLNRVQDIIHELSSQVEPLERQASIAKDYLEKKEELEKVEA 227
Score = 55 (24.4 bits), Expect = 9.7e-09, Sum P(3) = 9.7e-09
Identities = 21/84 (25%), Positives = 40/84 (47%)
Query: 392 KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNK 451
K K +L + + L + +++L DME+K KL + ++ + + I E +++ R +
Sbjct: 667 KQAKSSLLGRQR-ELEEWTNKLTDMEEKTTKLENFVK-AVKQEIQEKEVQIRELRKSVEA 724
Query: 452 EAYGPVLLEVNVSNRAHANYLEDH 475
E L + NR LE+H
Sbjct: 725 ERVDEQKLREEI-NRLE---LEEH 744
Score = 49 (22.3 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQ-EKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
++L IE K+ +L N + E +E ++ +L+E E +K+K+ + +++
Sbjct: 397 NELSMIEEQSKQQNSKNERLDEENAKYVEMRMEITAKKTKLVESYEQVKEKVAGILSNIQ 456
Query: 250 KAE 252
K E
Sbjct: 457 KTE 459
Score = 46 (21.3 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 361 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED 418
V +YE +K+ + S I + + + Q SE E L Q ++Q R + +E+
Sbjct: 438 VESYEQVKEKVAGILSNIQKTEAALGKCKAQYSENETKLYQAYQFVQQARSRKEMLEE 495
Score = 43 (20.2 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLK--DME 417
+I++ QI EL +R+ + + + +N+ +L + +DRL D+E
Sbjct: 707 EIQEKEVQIRELRKSVEAERVDEQKLREEINRLELEEHRINDRLSIYDLE 756
Score = 43 (20.2 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 28/119 (23%), Positives = 52/119 (43%)
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVG-DPQLPVQHCALV 187
KG+ +E+ + N L+ Q + + +K +L EE K V ++ + LV
Sbjct: 382 KGDYIELLNQQASHRNELSMIEEQSKQ-QNSKNE--RLDEENAKYVEMRMEITAKKTKLV 438
Query: 188 EKSSKLKT----IECTVKRNGDTLNQLKALNVEQEKD-------VERVRQRAELLEKVE 235
E ++K I +++ L + KA E E V++ R R E+LE+++
Sbjct: 439 ESYEQVKEKVAGILSNIQKTEAALGKCKAQYSENETKLYQAYQFVQQARSRKEMLEEMQ 497
>UNIPROTKB|Q9ERA5 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:47230 "Microtus arvalis" [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0006281 GO:GO:0006310
GO:GO:0046982 GO:GO:0007076 GO:GO:0007062 SUPFAM:SSF75553
HOVERGEN:HBG106696 EMBL:AJ299713 EMBL:AJ299717
ProteinModelPortal:Q9ERA5 Uniprot:Q9ERA5
Length = 1243
Score = 121 (47.7 bits), Expect = 9.9e-09, Sum P(3) = 9.9e-09
Identities = 61/303 (20%), Positives = 135/303 (44%)
Query: 687 KRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEI--------KNLLVEIVSCKWS 737
+++++ EKE +D+ L + D+A ++ I++ A E +NLL E+ + +
Sbjct: 900 EKEIKDTEKETNDLKAELKAIEDKAEEV-IKKTNAAEESLPEIQKEHRNLLQELKVIQEN 958
Query: 738 YAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKH-LSDAKRQAES 796
++ K+ +++ ++ +H + + Y +KE+ + H + D E+
Sbjct: 959 EHALQKDALSIKLKLEQIDGHIAEHN-----SKIKY--WQKEISKIKLHPIED--NPVET 1009
Query: 797 IAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK 856
++ ++PE + E ++ P +I A ++ + N + EY+ ++ L
Sbjct: 1010 VSVLSPE-DLEAIKNPDSITNQIAILEAQCHEMKP----NLGAIAEYKKKEELY--LQRV 1062
Query: 857 QEADK--KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 914
E DK E F + L+++ L I N+Q + + G+ L+ +S
Sbjct: 1063 AELDKITSERDNFRQAYEDLRKQRLNEFMAGFYIITNKLKENYQMLTLGGDAELELVDS- 1121
Query: 915 FDKF--GILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQ 972
D F GI+ V+ + ++ + SGGE+++S++ + +L P +DEI+
Sbjct: 1122 LDPFSEGIMFSVRPPKKSWKKIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDA 1178
Query: 973 GMD 975
+D
Sbjct: 1179 ALD 1181
Score = 104 (41.7 bits), Expect = 9.9e-09, Sum P(3) = 9.9e-09
Identities = 52/216 (24%), Positives = 95/216 (43%)
Query: 44 RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--------- 94
R + +IGPNGSGKS+++ ++ G Q + R+ + + +E I+
Sbjct: 62 RFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKLSVLIHNSDEHKDIQSCTVEVHFQ 120
Query: 95 --ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQ 148
I GD E + + R N S + +GK +V + + I +++
Sbjct: 121 KIIDKEGDDYEVIPNSNFCVSRTAYRDNTSVYHISGKKRTFKDVGNLLRSHGIDLDHNRF 180
Query: 149 FLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL--KTIECTVKRNGDT 206
+ Q V + A + P K E ++ + + + C + + K+ + +E + G+
Sbjct: 181 LILQGEVEQIAMMKP-KGQTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRVEILNENRGEK 239
Query: 207 LNQLKALNVEQEKD-VERVRQRA-ELLEKVESMKKK 240
LN++K VE+EKD VE + A E L + M KK
Sbjct: 240 LNRVKM--VEKEKDAVEGEKNIAIEFLTLEKEMFKK 273
Score = 90 (36.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 35/183 (19%), Positives = 85/183 (46%)
Query: 652 EDEAAKLQ-KEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQ 709
++E +Q KE E + +K+K++ +E +++ K++ +++ EK + + +L D
Sbjct: 786 QEEYLTVQIKELEANVLTTAPDKKKQKLLEENVSAFKKEYDAVAEKAGKVEAEVKRLHDT 845
Query: 710 AADLNIQQFKYAIEIKNLL-VEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ 768
++N ++ K +++ ++ C + + +A D + + + ++ + EK
Sbjct: 846 IIEINNRKLKAQQNKLDMINKQLDECASAITKAQVAIKTADRNLIKAQDSVVRTEKEIKD 905
Query: 769 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE---FLEMPTTIEELEAAIQ-D 824
D K E++ + ++ + PE++KE L+ I+E E A+Q D
Sbjct: 906 TEKETNDLKAELKAIEDKAEEVIKKTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKD 965
Query: 825 NIS 827
+S
Sbjct: 966 ALS 968
Score = 77 (32.2 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 49/277 (17%), Positives = 117/277 (42%)
Query: 647 EQRLIEDEAAKLQKEREEIINIV-QIEKRKRREMENHINLRKRKLESIEKEDDINTALAK 705
+Q+L+E+ + +KE + + ++E +R + I + RKL++ + + D+ + K
Sbjct: 810 KQKLLEENVSAFKKEYDAVAEKAGKVEAEVKRLHDTIIEINNRKLKAQQNKLDM---INK 866
Query: 706 LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 765
+D+ A K + IK ++ + S + + + +L+ LK E
Sbjct: 867 QLDECASAIT---KAQVAIKTADRNLIKAQDSVVRTEKEIKDTEKETNDLKAELKAIEDK 923
Query: 766 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 825
A + ++ + +K + ++ + I L+K+ L + +E+++ I ++
Sbjct: 924 AEEVIKKTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQIDGHIAEH 983
Query: 826 ISQANSIFFLNQNILQEYEH--RQRQIEDLSTKQEADKKELKR--FLAEIDALKEKWLPT 881
S+ I + + I + H +E +S D + +K + A+ E
Sbjct: 984 NSK---IKYWQKEISKIKLHPIEDNPVETVSVLSPEDLEAIKNPDSITNQIAILEAQCHE 1040
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF 918
++ + I E + + +E+ + LD+ S+ D F
Sbjct: 1041 MKPNLGAIAE-YKKK-EELYLQRVAELDKITSERDNF 1075
Score = 74 (31.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 31/147 (21%), Positives = 70/147 (47%)
Query: 749 DAKIRELEFNLKQHEKLAL---QASLHYEDCKKEVEHCRKHLSDA-KRQAESIAFITPEL 804
+ ++ ++E L++H K A + + +E+ ++ H + + + ++ A SI ++ +
Sbjct: 728 EEEVNKMESQLQKHSKQARRIQEQKVQHEERVVKLRHSEREMRNTLEKFAASIQGLSDQ- 786
Query: 805 EKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKEL 864
+E+L + I+ELEA + L +N+ ++ + + + K EA+ K L
Sbjct: 787 -EEYLTVQ--IKELEANVLTTAPDKKKQKLLEENV-SAFKKEYDAVAEKAGKVEAEVKRL 842
Query: 865 KRFLAEIDALKEKWLPTLRNLVAQINE 891
+ EI+ K L +N + IN+
Sbjct: 843 HDTIIEINNRK---LKAQQNKLDMINK 866
Score = 74 (31.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 55/308 (17%), Positives = 130/308 (42%)
Query: 673 KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIV 732
K+ RR E + +R ++ E ++ L K L+ Q+ ++IK L ++
Sbjct: 743 KQARRIQEQKVQHEERVVKLRHSEREMRNTLEKFAASIQGLSDQEEYLTVQIKELEANVL 802
Query: 733 SCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS-LHYEDCKKEVEHCRKHLSDAK 791
+ ++ + A +E + ++ K+ + LH D E+ + RK K
Sbjct: 803 TTAPDKKKQKLLEENVSAFKKEYDAVAEKAGKVEAEVKRLH--DTIIEINN-RK----LK 855
Query: 792 RQAESIAFITPELEKEFLEMPTTIEELEAAIQD---NISQANSIFFLNQNILQEYEHRQR 848
Q + I +L+ E + I + + AI+ N+ +A + +E + ++
Sbjct: 856 AQQNKLDMINKQLD----ECASAITKAQVAIKTADRNLIKAQDSVVRTE---KEIKDTEK 908
Query: 849 QIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL----RNLVAQIN--ETFSRNFQEMAV 902
+ DL + +A + + + + + +A +E LP + RNL+ ++ + Q+ A+
Sbjct: 909 ETNDLKAELKAIEDKAEEVIKKTNAAEES-LPEIQKEHRNLLQELKVIQENEHALQKDAL 967
Query: 903 AGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNC 962
+ ++ L++ + + K+K+ Q ++ + H ++L L+ + N
Sbjct: 968 SIKLKLEQIDGHIAEHNS--KIKYWQK-EISKIKLHPIEDNPVETVSVLSPEDLEAIKN- 1023
Query: 963 PFRVVDEI 970
P + ++I
Sbjct: 1024 PDSITNQI 1031
Score = 68 (29.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 66/343 (19%), Positives = 128/343 (37%)
Query: 99 GDTKEEHLTIMRKID--TRNKSEWFFNGKVVPKG-EVLEITKRFNIQVNNLTQ--FLPQD 153
G E + R+++ N+ E K+V K + +E K I+ L + F ++
Sbjct: 216 GRLNEPIKVLCRRVEILNENRGEKLNRVKMVEKEKDAVEGEKNIAIEFLTLEKEMFKKKN 275
Query: 154 RVCEFAKLSPVKLLEET----EKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQ 209
VC++ K ++E EK D + + ++ S+++K VK L++
Sbjct: 276 HVCQYYIYDLQKRIDEMKTQKEKIHEDTKEITEKSNML--SNEMKAKNSAVKDIEKKLHK 333
Query: 210 L-KALNVEQEK----DVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXX 264
K + +EK D+E V+ R +L KK L+ D +K E +
Sbjct: 334 ATKFIEENKEKFRQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSIPAKSKTI 393
Query: 265 XXXXXXXNTLHEFSKPIEGKKQEKAI--LDGDCKKLSSLINENSKRRMDFLEKVDXXXXX 322
++ E K E KK ++ + L + + L + K M F + V+
Sbjct: 394 INETTTKSSSLEKEKEKEEKKLKEVMDSLKQETQGLQKEKEDQEKELMGFNKSVNEARSK 453
Query: 323 XXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELG 382
+ KA+ + A E ++ +G +
Sbjct: 454 MEVAQSELDIYLSRHNTAVSQLSKAKETL---------ITASETLKERKAAIGE--INTK 502
Query: 383 VQANQKRLQKSEKE-KILNQNKLTLRQC-SDRLKDMEDKNNKL 423
+ Q+ L++ EKE + L Q ++ L+ D + +E+ + L
Sbjct: 503 LPQTQQELKEKEKELQKLTQEEINLKSLVHDLFQKVEEAKSSL 545
Score = 49 (22.3 bits), Expect = 9.9e-09, Sum P(3) = 9.9e-09
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 272 NTLHEFSKPIEGKKQEKAILDGDCKKLSS--LINENSKRRMDFLEK 315
NTL +F+ I+G ++ L K+L + L K++ LE+
Sbjct: 771 NTLEKFAASIQGLSDQEEYLTVQIKELEANVLTTAPDKKKQKLLEE 816
Score = 46 (21.3 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 23/105 (21%), Positives = 49/105 (46%)
Query: 365 EPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
E +++ K+ SQ+ Q + K+ ++ +++K+ ++ ++ + S+R +M + K
Sbjct: 725 EISEEEVNKMESQL-----QKHSKQARRIQEQKVQHEERVVKLRHSER--EMRNTLEKFA 777
Query: 425 HALRNSGAENIFEAYCWLQQHRHELNKEAYGP-----VLLEVNVS 464
+++ + E Y +Q E N P LLE NVS
Sbjct: 778 ASIQGLSDQ---EEYLTVQIKELEANVLTTAPDKKKQKLLEENVS 819
>UNIPROTKB|G3X7C0 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes
protein" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042770 "signal transduction in response to DNA
damage" evidence=IEA] [GO:0036033 "mediator complex binding"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0030893 "meiotic cohesin
complex" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0009314 "response to radiation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0000075
"cell cycle checkpoint" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0000776 GO:GO:0006281 GO:GO:0003682 GO:GO:0042770
GO:GO:0006310 GO:GO:0030261 GO:GO:0009314 GO:GO:0032876
GO:GO:0000075 GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
OMA:NALVCET GeneTree:ENSGT00580000081569 EMBL:DAAA02073280
EMBL:DAAA02073281 Ensembl:ENSBTAT00000023619 Uniprot:G3X7C0
Length = 1232
Score = 122 (48.0 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ A+ ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLK 213
Score = 107 (42.7 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 76/383 (19%), Positives = 163/383 (42%)
Query: 652 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 703
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
L + + + + + NLL +CK + ++ D I + E + + +
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGSSQGED 961
Query: 764 KLA---LQASLHYEDCKKEVEH--CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
++ ++++ + E+++ + L DA+ + E I L+++ E + ++ +
Sbjct: 962 SVSGSQRTSNIYAREALIEIDYGDLCEDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQRI 1020
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
A + + S+ Q E+E +++ + E KKE RF D +
Sbjct: 1021 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNACF 1074
Query: 879 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLSA 937
N + +I + SRN A G + +E D + + K FR L
Sbjct: 1075 ESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLS---- 1129
Query: 938 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQ 997
GE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N Q
Sbjct: 1130 -----GEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF-Q 1182
Query: 998 CFLLTPKLLPDLEYSEACSILNI 1020
+++ L + Y++A S++ +
Sbjct: 1183 AIVIS---LKEEFYTKAESLIGV 1202
Score = 98 (39.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 57/271 (21%), Positives = 118/271 (43%)
Query: 655 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 713
AA+ ++ ++E + ++ K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 714 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 773
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 774 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 833
+ K++E +K L +A++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 834 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 883
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 884 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 912
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 90 (36.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 770
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 771 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 826
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 827 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 913
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 86 (35.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 55/261 (21%), Positives = 118/261 (45%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 711 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 763
L Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 764 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 815
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 816 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 874
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 875 KEKWLPTLRNLVAQINETFSR 895
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 70 (29.7 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 649 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 705
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 706 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 744
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 745 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 801
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 802 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 861
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 862 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 921
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 922 IKVKFRQSGQLEVLSAHH 939
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 751 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 806
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 807 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 863
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 864 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 914
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 44 (20.5 bits), Expect = 3.1e-08, Sum P(4) = 3.1e-08
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 383 VQANQKRLQKSE------KEKILNQNKLT--LRQCSDRLKDMEDKNNKLLH-ALRNSGAE 433
++ NQKR++K E K+ + Q KL L + + K D+ NK L+ + G
Sbjct: 428 IEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDA 487
Query: 434 NIFEAYCWLQQHRHEL 449
I QQ + E+
Sbjct: 488 RIDRQESSRQQRKAEI 503
Score = 44 (20.5 bits), Expect = 3.1e-08, Sum P(4) = 3.1e-08
Identities = 20/93 (21%), Positives = 41/93 (44%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDMED 418
Y+ D++ + Q+ + N+ ++K KE K + ++K + + D LK+ +
Sbjct: 209 YQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Query: 419 KNNKLLHALRNSGAENIFEAYCWLQQHRHELNK 451
+ K++ + E I E L Q R + K
Sbjct: 269 ELGKMMREQQQIEKE-IKEKDSELNQKRPQYIK 300
Score = 43 (20.2 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 436
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 437 EAYCWLQQHRHELNK 451
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 40 (19.1 bits), Expect = 3.1e-08, Sum P(4) = 3.1e-08
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 490 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 550 -ISQFGLDSS 558
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 428 RNSGAENIFEAYC 440
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
Score = 37 (18.1 bits), Expect = 6.1e-08, Sum P(3) = 6.1e-08
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 376 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS---DRLKDMEDKNNKLL 424
+Q LG+Q + ++ Q E + ++ + T+++ ++LK E ++ K++
Sbjct: 812 NQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKII 863
>DICTYBASE|DDB_G0291752 [details] [associations]
symbol:smc1 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=ISS] [GO:0042770
"signal transduction in response to DNA damage" evidence=ISS]
[GO:0008280 "cohesin core heterodimer" evidence=ISS] [GO:0007064
"mitotic sister chromatid cohesion" evidence=ISS] [GO:0007052
"mitotic spindle organization" evidence=ISS] [GO:0003777
"microtubule motor activity" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0000075 "cell cycle checkpoint"
evidence=ISS] [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 dictyBase:DDB_G0291752 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GenomeReviews:CM000155_GR GO:GO:0007052
GO:GO:0006281 GO:GO:0003682 EMBL:AAFI02000182 GO:GO:0042770
GO:GO:0006310 GO:GO:0046982 GO:GO:0030261 GO:GO:0003777
GO:GO:0000075 GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0008280 KO:K06636 OMA:NALVCET RefSeq:XP_629977.1
ProteinModelPortal:Q54E85 STRING:Q54E85 EnsemblProtists:DDB0219931
GeneID:8628307 KEGG:ddi:DDB_G0291752 InParanoid:Q54E85
Uniprot:Q54E85
Length = 1373
Score = 114 (45.2 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 52/238 (21%), Positives = 108/238 (45%)
Query: 774 EDCKKEVEHC--RKHLSDAKRQAESIAFITPELEKE-FLEMPTTIEELEAAIQDNISQAN 830
+D K++ + + D SI F L+K F++ T E L D +
Sbjct: 1068 QDIIKDITQAMVQDDILDIYEDEASIKFNYSSLKKRVFVDQKTYEEYLRKLTIDIETIGK 1127
Query: 831 SIFFLNQNILQEYEH------RQRQI-EDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 883
+ + N + YEH + +++ ++L+ ++ K ++ F D K+ +L +
Sbjct: 1128 EMKRVMPNY-KAYEHLVDVSDKLKKVRKELNQARDNAKTKIDSFNRVRDQRKQLFLRAFK 1186
Query: 884 NLVAQINETFSRNFQEMAV-----AGEVSLDEHESDFD---KFGILIKVK-FRQSGQLEV 934
+ + +S +E+ + ++L++ E+ F+ +F ++ K F++ QL
Sbjct: 1187 RIAKNLTSIYSELTRELEPPYHRGSAHLALEDTENPFNSGVRFTVIPPNKRFQEMDQL-- 1244
Query: 935 LSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 992
SGGE+SV+ + +L S L + PF ++DEI+ D +N K+ + + AS+
Sbjct: 1245 ------SGGEKSVAALAFLFSTHGLKSTPFMILDEIDAAFDSVNVLKLVRYVRHKASK 1296
Score = 112 (44.5 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 52/226 (23%), Positives = 98/226 (43%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYV 84
+++ NF ++ + + P + VIGPNG GKS+++ AI LG ++ + R+T + V
Sbjct: 6 LKIQNFKSYKGNPLIGPFKDFSCVIGPNGRGKSNIMDAIIFVLGHNSSQI-RSTKLNELV 64
Query: 85 KR-----------GEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVL 133
G+ S Y+ I+ + + + RKI N S++FF V +
Sbjct: 65 NTHIVTDKNNNEGGDNSTYVAINF--NHQGNNYRFSRKI-IGNGSQYFFEQTQVSAEQYQ 121
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
+ K I + F+ Q V A +P ++ + G L ++ L+ + SK
Sbjct: 122 KHLKDIGIDIGTKNFFVFQGDVESIATQNPKQISAFIDDISGSRALKFEYDRLLGEKSKC 181
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDV-ERVRQRAELLEKVESMK 238
+ T+ A EQ K+ V++ + ++V+S+K
Sbjct: 182 EDDVFASYAKRKTI----AFEKEQYKEQWTEVKEYQSMQDRVDSLK 223
Score = 89 (36.4 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 47/255 (18%), Positives = 112/255 (43%)
Query: 649 RLIEDEAAKLQKE---REEIINIVQIEKRKRREMENHINLRKRKLESIEK-EDDINTALA 704
RLI+ + K + EEI I + K+ + + N R ++++ I++ +++N
Sbjct: 290 RLIKGKKKKGSDQYSAEEEIKYISEKIKKTKLILSKAENSRSKQIQEIDQLRNELNEFTE 349
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVS-CKW-SYAEKHMASIEFDAKIRELEFNLKQH 762
+L + + + + +I++ + +E + K S E I++D RE + QH
Sbjct: 350 QLENLDDEKEVAETGLSIKMDHQQIEEYNQLKLQSGKETSGLKIKYDQLSREHKIEQDQH 409
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
++L + +E KK+ + ++ + K +S F ++ ++E E +
Sbjct: 410 QQLTYRLE-EFETMKKKFQESKEKFQNQKDIEQS----------NFQDLEQKLKESEKEL 458
Query: 823 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL 882
++ N QN+ + E Q + DL + + +++ ++F ++ LK + P +
Sbjct: 459 VQCTTRFNETQQRQQNLNNDLERIQYSLSDLKSLKSESQRD-RQFNQTVETLKSIF-PGV 516
Query: 883 RNLVAQINETFSRNF 897
+ + + E R +
Sbjct: 517 KGKLMDLCEPSQRKY 531
Score = 78 (32.5 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 54/236 (22%), Positives = 104/236 (44%)
Query: 650 LIEDEAAKLQKE---REEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDIN----T 701
L+ D K Q+E E++IN I + E+ + RK +L+ ++ E + I +
Sbjct: 729 LLNDRLKKNQQELETNEKVINETIIPELS--ELNETLAKRKTQLDQLQSEINSIEERYFS 786
Query: 702 ALAKL--VD---QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 756
+K VD + D + + + I+ + L E +S S + E D +I++L
Sbjct: 787 GFSKKFGVDNIREYEDNRLAKIQENIQKRLSLTESISVIQSRLDYEQGR-EIDNEIKQLS 845
Query: 757 FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA-------KRQAESIAFITPELEKE-- 807
L +EK+ Q H ++ ++ + +++LSD K Q + + +L+K+
Sbjct: 846 EELNANEKILDQELEHKKENDEKEKQFKENLSDLQKQHTEKKSQLDKMNITIKDLKKQLS 905
Query: 808 -FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK-QEADK 861
F T IE+L NI++ ++ IL E + ++ L K +E D+
Sbjct: 906 TFNNQITDIEKLSNRHDFNITKLRGVY---HQILIETRNEDIRLPILQFKGKEIDQ 958
Score = 47 (21.6 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 386 NQKRLQKS---EKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
NQK +++S + E+ L +++ L QC+ R + + + L
Sbjct: 435 NQKDIEQSNFQDLEQKLKESEKELVQCTTRFNETQQRQQNL 475
Score = 43 (20.2 bits), Expect = 2.0e-07, Sum P(4) = 2.0e-07
Identities = 24/95 (25%), Positives = 39/95 (41%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN-- 429
E+L + L + K+ + EKEK +N L++ K DK N + L+
Sbjct: 846 EELNANEKILDQELEHKK-ENDEKEKQFKENLSDLQKQHTEKKSQLDKMNITIKDLKKQL 904
Query: 430 SGAENIFEAYCWLQQHRHELN----KEAYGPVLLE 460
S N L +RH+ N + Y +L+E
Sbjct: 905 STFNNQITDIEKLS-NRHDFNITKLRGVYHQILIE 938
Score = 41 (19.5 bits), Expect = 7.3e-08, Sum P(3) = 7.3e-08
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
D+ ++L ++ E + +K+ Q+S KEK NQ + D + +++ +L+
Sbjct: 407 DQHQQLTYRLEEF--ETMKKKFQES-KEKFQNQKDIEQSNFQDLEQKLKESEKELV 459
Score = 39 (18.8 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 13/60 (21%), Positives = 30/60 (50%)
Query: 364 YEPPHDKIEKLGSQIL-ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
++ +D+ EK + L +L Q +K+ Q + + K L ++++ D+E +N+
Sbjct: 861 HKKENDEKEKQFKENLSDLQKQHTEKKSQLDKMNITIKDLKKQLSTFNNQITDIEKLSNR 920
Score = 38 (18.4 bits), Expect = 2.0e-07, Sum P(4) = 2.0e-07
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 291 LDGDCKKLSSLINENSK 307
+D + K+LS +N N K
Sbjct: 837 IDNEIKQLSEELNANEK 853
>SGD|S000003610 [details] [associations]
symbol:SMC3 "Subunit of the multiprotein cohesin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0007130 "synaptonemal
complex assembly" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0030437 "ascospore formation" evidence=IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=IMP] [GO:0007131 "reciprocal meiotic
recombination" evidence=IMP] [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IGI] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 SGD:S000003610 Pfam:PF02463
GO:GO:0005524 GO:GO:0051301 EMBL:BK006943 GO:GO:0016887 EMBL:X88851
GO:GO:0030437 GO:GO:0007131 GO:GO:0007130 GO:GO:0007064
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0051177 GO:GO:0034990
HOGENOM:HOG000166512 KO:K06669 GeneTree:ENSGT00580000081628
OrthoDB:EOG4TB7KF EMBL:Y14278 EMBL:Z49349 PIR:S56850
RefSeq:NP_012461.1 ProteinModelPortal:P47037 SMR:P47037
DIP:DIP-2991N IntAct:P47037 MINT:MINT-435389 STRING:P47037
PaxDb:P47037 PeptideAtlas:P47037 EnsemblFungi:YJL074C GeneID:853371
KEGG:sce:YJL074C CYGD:YJL074c OMA:NIRMENI NextBio:973810
Genevestigator:P47037 GermOnline:YJL074C Uniprot:P47037
Length = 1230
Score = 134 (52.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 61/272 (22%), Positives = 111/272 (40%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISLR------- 98
N++IG NGSGKS+ AI L D L R G + +G + S+
Sbjct: 28 NVIIGSNGSGKSNFFAAIRFVLSDDYSNLKREERQGL-IHQGSGGSVMSASVEIVFHDPD 86
Query: 99 -------G--DTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQF 149
G ++ +TI R + + K ++ N + V KG+++ + + +NN
Sbjct: 87 HSMILPSGVLSRGDDEVTIRRTVGLK-KDDYQLNDRNVTKGDIVRMLETAGFSMNNPYNI 145
Query: 150 LPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQ 209
+PQ ++ + L+ E VG V+ A ++K + + + + + LN
Sbjct: 146 VPQGKIVALTNAKDKERLQLLEDVVGAKSFEVKLKASLKKMEETEQKKIQINKEMGELNS 205
Query: 210 LKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXX 269
K +EQE R+ E ++E +K + YD + E I
Sbjct: 206 -KLSEMEQE------RKELEKYNELERNRKIYQFTLYDRELNEVINQMERLDGDYN---- 254
Query: 270 XXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL 301
NT++ + I+ + + ++D KKLSS+
Sbjct: 255 --NTVYSSEQYIQELDKREDMIDQVSKKLSSI 284
Score = 91 (37.1 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 33/145 (22%), Positives = 68/145 (46%)
Query: 842 EYEHRQRQIEDLSTKQEADK-----KELKRFLAEIDALKEKWLP--TLRNLVAQINETFS 894
E + + I+DL K + K ++ +A+ E+ +P T + ++ + N+ +
Sbjct: 1018 ELDESKDSIQDLIVKLKQQKVNAVDSTFQKVSENFEAVFERLVPRGTAKLIIHRKNDNAN 1077
Query: 895 RNFQEMAVAGEVSLDEHESDFDK----FGILIKVKFRQSGQLEVLSAHHQSGGERSVSTI 950
+ + + V + +E ++ D G+ I V F S Q E L SGG+++V I
Sbjct: 1078 DHDESIDVDMDAESNESQNGKDSEIMYTGVSISVSFN-SKQNEQLHVEQLSGGQKTVCAI 1136
Query: 951 LYLVSLQDLTNCPFRVVDEINQGMD 975
++++Q + F + DEI+ +D
Sbjct: 1137 ALILAIQMVDPASFYLFDEIDAALD 1161
Score = 89 (36.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 67/312 (21%), Positives = 135/312 (43%)
Query: 644 MQTEQRLIEDEAAKLQK-ERE-EIINIVQIEKRKRREME-----NHINLR----KRKLES 692
+ + +I+ + KL E +I N +++ K RE E ++N++ ++++ES
Sbjct: 267 LDKREDMIDQVSKKLSSIEASLKIKNATDLQQAKLRESEISQKLTNVNVKIKDVQQQIES 326
Query: 693 IEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 752
E++ ++++A K + + Q+ +I E+ + Y + +AS++ K
Sbjct: 327 NEEQRNLDSATLKEIKSIIEQRKQKLS---KILPRYQELTKEEAMY-KLQLASLQ--QKQ 380
Query: 753 RELEFNLKQHEKLALQASLHYED-CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM 811
R+L LK+ E ++ + E+E + + + + L K++ +
Sbjct: 381 RDLI--LKKGEYARFKSKDERDTWIHSEIEELKSSIQNLNELESQLQMDRTSLRKQYSAI 438
Query: 812 PTTIEELEAAIQDNISQANSIFFLNQNILQEYEH-RQRQIEDLSTKQEADKKELKRFLAE 870
IEEL D+I+ ++ L ++ E H +Q+ E L T++E +KE K
Sbjct: 439 DEEIEELI----DSINGPDTKGQL-EDFDSELIHLKQKLSESLDTRKELWRKEQK----- 488
Query: 871 IDALKEKWLPTLRNLVAQINETFSRNFQEMAV-AGEVSLD---EHESDFDKFGILIKVKF 926
+ + E L + +NET SR+ + E++ ES F G LIKV
Sbjct: 489 LQTVLETLLSDVNQNQRNVNETMSRSLANGIINVKEITEKLKISPESVFGTLGELIKVND 548
Query: 927 RQSGQLEVLSAH 938
+ EV+ +
Sbjct: 549 KYKTCAEVIGGN 560
Score = 71 (30.1 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 60/289 (20%), Positives = 130/289 (44%)
Query: 647 EQRLIEDEAAKLQKEREEII---NIVQIEKRKRREMENHINLRKRKLES--IEKEDDINT 701
+ L ++E +L+ +EI N + I + I+ +LES I +E+D+ +
Sbjct: 794 DSELSKEEKERLESLTKEISAAHNKLNITSDALEGITTTIDSLNAELESKLIPQENDLES 853
Query: 702 ALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSY--AEKHMASI--EFDAKIRELEF 757
++++ D A +Q E+K L +E S + + A + ++ E ++ I E
Sbjct: 854 KMSEVGD-AFIFGLQD-----ELKELQLEKESVEKQHENAVLELGTVQREIESLIAEETN 907
Query: 758 NLKQHEKLALQASL---HYEDCKKEVEHC--RKHLSDAKRQA--ESIAFI--TPE--LEK 806
N K EK Q L ++ +K VE +K +R+ + I I PE L
Sbjct: 908 NKKLLEKANNQQRLLLKKLDNFQKSVEKTMIKKTTLVTRREELQQRIREIGLLPEDALVN 967
Query: 807 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
+F ++ T ++L + D ++ + + +N+ + ++ + +DL+ ++ ++ E K
Sbjct: 968 DFSDI--TSDQLLQRLNDMNTEISGLKNVNKRAFENFKKFNERRKDLA-ERASELDESKD 1024
Query: 867 FLAE-IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 914
+ + I LK++ + + + +++E F F+ + G L H +
Sbjct: 1025 SIQDLIVKLKQQKVNAVDSTFQKVSENFEAVFERLVPRGTAKLIIHRKN 1073
Score = 54 (24.1 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 55/275 (20%), Positives = 119/275 (43%)
Query: 650 LIEDEAAKLQKEREEIINIVQIE-KR--KRREMEN-HINLRKR-KLESIEKEDDINTALA 704
+++D L+ ++ +N + ++ R KR + +++ KR +LES++ ++ +
Sbjct: 640 VVKDLGQGLKLAKKHKLNAITLDGDRADKRGVLTGGYLDQHKRTRLESLKNLNESRSQHK 699
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 764
K++++ D ++ I+ K ++ V+ S+ + ++ N K++EK
Sbjct: 700 KILEEL-DF-VRNELNDIDTK---IDQVNGNIRKVSNDRESVLTNIEVYRTSLNTKKNEK 754
Query: 765 LALQASLHYEDCKKEVEHCRKHLSDAKRQA---ESIAFITPELEKEFLE-MPTTIEELEA 820
L L+ SL+ K E + + + K + + EL KE E + + +E+ A
Sbjct: 755 LILEESLNAIILKLEKLNTNRTFAQEKLNTFENDLLQEFDSELSKEEKERLESLTKEISA 814
Query: 821 AIQD-NISQ------ANSIFFLNQNILQEYEHRQRQIED-LSTKQEADKKELKRFLAEID 872
A NI+ +I LN + + ++ +E +S +A L+ L E+
Sbjct: 815 AHNKLNITSDALEGITTTIDSLNAELESKLIPQENDLESKMSEVGDAFIFGLQDELKELQ 874
Query: 873 ALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVS 907
KE N V ++ T R + + +A E +
Sbjct: 875 LEKESVEKQHENAVLELG-TVQREIESL-IAEETN 907
Score = 43 (20.2 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 369 DKIEKLGSQ-ILELG-VQANQKRL--QKSEKEKIL----NQNKLTLRQCSDRLKDME 417
+ +EK +LELG VQ + L +++ +K+L NQ +L L++ + K +E
Sbjct: 878 ESVEKQHENAVLELGTVQREIESLIAEETNNKKLLEKANNQQRLLLKKLDNFQKSVE 934
Score = 41 (19.5 bits), Expect = 1.6e-07, Sum P(4) = 1.6e-07
Identities = 8/38 (21%), Positives = 24/38 (63%)
Query: 387 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
Q++++ +E+++ N + TL++ ++ + K +K+L
Sbjct: 321 QQQIESNEEQR--NLDSATLKEIKSIIEQRKQKLSKIL 356
Score = 39 (18.8 bits), Expect = 1.6e-07, Sum P(4) = 1.6e-07
Identities = 19/85 (22%), Positives = 41/85 (48%)
Query: 491 DRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVLI 550
+R F + L F+ +L +E S++E ++ E ISA +++ A++ +
Sbjct: 774 NRTFAQEKLNTFENDLLQEFDSELSKEEKERL--ESLTKEISAAHNKLNITSDALEGITT 831
Query: 551 SQFGLDSSYIGSKETDQKADNVAKL 575
+ L++ + SK Q+ D +K+
Sbjct: 832 TIDSLNAE-LESKLIPQENDLESKM 855
>POMBASE|SPBC146.03c [details] [associations]
symbol:cut3 "condensin complex subunit Cut3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IMP] [GO:0034613
"cellular protein localization" evidence=IMP] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 PomBase:SPBC146.03c Pfam:PF02463 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0034613 GO:GO:0051301
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0006310
GO:GO:0007076 GO:GO:0000939 GO:GO:0000796 GO:GO:0007062 KO:K06675
SUPFAM:SSF75553 OMA:IAIEFLT HOGENOM:HOG000184777 EMBL:D30788
EMBL:AB027959 PIR:S51622 RefSeq:NP_595392.1
ProteinModelPortal:P41004 DIP:DIP-35048N IntAct:P41004
STRING:P41004 EnsemblFungi:SPBC146.03c.1 GeneID:2539817
KEGG:spo:SPBC146.03c OrthoDB:EOG4WM82V NextBio:20800966
Uniprot:P41004
Length = 1324
Score = 116 (45.9 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 78/344 (22%), Positives = 156/344 (45%)
Query: 654 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINT-ALAKLVDQAAD 712
E K K++ +N + +K+K + + +L ++ E D T ++A L +
Sbjct: 946 EQLKFVKDK---LNKMSFKKKKNEQRSQSFQV---ELSNLTSEYDTTTESIATLKTELQS 999
Query: 713 LNIQQFKYAIEIKNLLVEIVSCKW---SYAEKHMASIEFDAK----IR----ELEFNLKQ 761
LN KY E K+ L E + W S ++ + IEF++K ++ ELE N Q
Sbjct: 1000 LN----KYVDEHKSRLREFENALWDINSSIDELVKFIEFESKQMNSVKAERIELE-NQIQ 1054
Query: 762 HEKLALQASLHYED-CKKEVEHCRKH-LSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
++ AL + E+ K + + + H L++ Q ++ PE ++ L +++++ E
Sbjct: 1055 EQRTALSEVGNNENKYLKLMSNLKLHNLTEFCDQT-TMDSTFPEYSEDEL---SSVDKSE 1110
Query: 820 AAIQDNIS---QANSIFFLNQNILQEYEHRQRQIE--DLSTKQEADKK-ELKRFLAEIDA 873
+ NIS + ++ N+L EY ++ E D + E K+ +LK+ + ++ +
Sbjct: 1111 --LVSNISVLKKKTEDREVDINVLSEYRRCNKEAEKRDSDYQSELQKRTDLKKVVTDLQS 1168
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQ 931
+ L I+ +Q + + G L+ +S D F G+L V +
Sbjct: 1169 QR---LDEFMYGFGIISMKLKEMYQIITMGGNAELELVDS-LDPFSEGVLFSVMPPKKSW 1224
Query: 932 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
+ + SGGE+++S++ + +L + P V+DEI+ +D
Sbjct: 1225 KNISNL---SGGEKTLSSLALVFALHNYKPTPLYVMDEIDAALD 1265
Score = 108 (43.1 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 56/236 (23%), Positives = 100/236 (42%)
Query: 23 IIEIELHNFMTFDHL-ICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
+ E+ L NF ++ I P + ++GPNGSGKS+++ A+ G L R +
Sbjct: 126 VYELRLTNFKSYAGTQIVGPFHPSFSSIVGPNGSGKSNVIDALLFVFGFRASKL-RQSKA 184
Query: 81 GAYVKRGE-----ESGYIKISLRGDTKE------EHLTIMRKIDTRNKSEWFFNGKVVPK 129
A + + +S ++I+ + + LT+ R N S++F NG
Sbjct: 185 SALIHKSATHPSLDSCDVEITFKEVNSDFTYVDGSELTVRRTAYKNNTSKYFVNGVESSF 244
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
V + K I +N+ + Q V A++ P + E GD L +++ +
Sbjct: 245 SAVSNLLKEKGIDLNHKRFLILQGEVESIAQMKPRAISE------GDDGL-LEYLEDIIG 297
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
+SK K I ++ N L+ + E+E ++ V LE +S L +LK
Sbjct: 298 TSKYKPI---IEENMQELSNSDDICAEKESRLKLVLSEKAKLE--DSKNSVLSFLK 348
Score = 82 (33.9 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 42/183 (22%), Positives = 87/183 (47%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES-IEKEDDINTALAKLVDQ 709
++DE K+ + I+ + K+ ++N +N + KL++ +EK + +++ ++
Sbjct: 347 LKDENELFMKQNQLYRTILYETRNKKTLVQNLLNSLEGKLQAHLEKFEQTERDISEKNEE 406
Query: 710 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL--AL 767
L + A ++KN + SY E+ IE +L+F L + +KL ++
Sbjct: 407 VKSLR----EKAAKVKNDCTSEKKTRQSY-EQQTVKIE-----EQLKFLLNKEKKLKKSI 456
Query: 768 QASLHYEDCKKEVEHC-RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 826
+A L +E K E E+ H D+++ IA ++ L++E L + + L+ + I
Sbjct: 457 EA-LSFE--KSEAENSLSSHDIDSQKLNSEIADLSLRLQQEELSLDDIRKSLQGKTE-GI 512
Query: 827 SQA 829
S A
Sbjct: 513 SNA 515
Score = 77 (32.2 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 48/241 (19%), Positives = 101/241 (41%)
Query: 648 QRLIEDEAAKLQKEREEI-IN----IVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
+R ++++ + + KE E I IN + +I+ + + ME +R R +S K DD++
Sbjct: 891 KRNLQNKISNMDKEVEAININNEGLVTEIKTLQDKIMEIG-GIRYRIQKS--KVDDLHEQ 947
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
L + D+ ++ ++ K ++ VE+ + Y + +++ L + +H
Sbjct: 948 LKFVKDKLNKMSFKKKKNEQRSQSFQVELSNLTSEYDTTTESIATLKTELQSLNKYVDEH 1007
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE--- 819
+ + D ++ K + +Q S+ ELE + E T + E+
Sbjct: 1008 KSRLREFENALWDINSSIDELVKFIEFESKQMNSVKAERIELENQIQEQRTALSEVGNNE 1067
Query: 820 ---AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
+ N+ N F +Q + + ++LS+ DK EL ++ I LK+
Sbjct: 1068 NKYLKLMSNLKLHNLTEFCDQTTMDSTFPEYSE-DELSS---VDKSEL---VSNISVLKK 1120
Query: 877 K 877
K
Sbjct: 1121 K 1121
Score = 76 (31.8 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 45/219 (20%), Positives = 93/219 (42%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE-KEDDINTALAKLV 707
RL+ E ++ + + ++ +I +RKR ++N I+ +++E+I + + T + L
Sbjct: 865 RLVAGEERRILQLKSDLKSIRNNNERKRN-LQNKISNMDKEVEAININNEGLVTEIKTLQ 923
Query: 708 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLAL 767
D+ + I +Y I+ V+ + + + + + + F K E Q E L
Sbjct: 924 DKI--MEIGGIRYRIQKSK--VDDLHEQLKFVKDKLNKMSFKKKKNEQRSQSFQVELSNL 979
Query: 768 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 827
+ Y+ + + + L + + E E ++ ++I+EL I+
Sbjct: 980 TSE--YDTTTESIATLKTELQSLNKYVDEHKSRLREFENALWDINSSIDELVKFIEFESK 1037
Query: 828 QANSIFFLNQNILQEYEHR-QRQIEDLSTKQEADKKELK 865
Q NS+ + I E E++ Q Q LS + K LK
Sbjct: 1038 QMNSV--KAERI--ELENQIQEQRTALSEVGNNENKYLK 1072
Score = 72 (30.4 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 28/131 (21%), Positives = 54/131 (41%)
Query: 188 EKSSKLKTI-ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
EK+ ++K++ E K D ++ K +++ V+ Q LL K + +KK + L +
Sbjct: 402 EKNEEVKSLREKAAKVKNDCTSEKKTRQSYEQQTVKIEEQLKFLLNKEKKLKKSIEALSF 461
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS 306
+ +AE +L + + K+ L G + +S+ I E
Sbjct: 462 EKSEAENSLSSHDIDSQKLNSEIADLSLRLQQEELSLDDIRKS-LQGKTEGISNAIEEKQ 520
Query: 307 KRRMDFLEKVD 317
K LEK++
Sbjct: 521 KAMAPALEKIN 531
Score = 48 (22.0 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 393 SEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 434
SEK+ + + + L + +D + D+E + L LRN EN
Sbjct: 535 SEKQILQVELDMLLNKENDLINDVESSQSSL-DKLRNDAEEN 575
Score = 44 (20.5 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 368 HD-KIEKLGSQILELGVQANQKRLQKSEKEKILNQNK 403
HD +KL S+I +L ++ Q+ L + K L Q K
Sbjct: 473 HDIDSQKLNSEIADLSLRLQQEELSLDDIRKSL-QGK 508
>UNIPROTKB|C9JMN1 [details] [associations]
symbol:SMC6 "Structural maintenance of chromosomes protein
6" species:9606 "Homo sapiens" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] InterPro:IPR027132 EMBL:AC093731
PANTHER:PTHR19306:SF2 EMBL:AC097377 IPI:IPI00816217 HGNC:HGNC:20466
HOGENOM:HOG000286038 ChiTaRS:SMC6 ProteinModelPortal:C9JMN1
SMR:C9JMN1 STRING:C9JMN1 Ensembl:ENST00000446852 UCSC:uc002rcq.2
ArrayExpress:C9JMN1 Bgee:C9JMN1 Uniprot:C9JMN1
Length = 740
Score = 136 (52.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 55/206 (26%), Positives = 98/206 (47%)
Query: 55 GKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISLR--GDTK---------- 102
GKS+++ A+ + LGG R +S+ +VK G+ S I I+LR GD
Sbjct: 107 GKSAVLTALIVGLGGRAVATNRGSSLKGFVKDGQNSADISITLRNRGDDAFKASVYGNSI 166
Query: 103 --EEHLTIMRKIDTRNKSEWFFNGKVVP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEF 158
++H++I + KS G VV K E++ I FNIQV+N L Q+ +F
Sbjct: 167 LIQQHISIDGSRSYKLKSA---TGSVVSTRKEELIAILDHFNIQVDNPVSVLTQEMSKQF 223
Query: 159 AKL-SPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQ 217
+ + + KA Q+ + ++E +K +T E + + + L +LK VE+
Sbjct: 224 LQSKNEGDKYKFFMKATQLEQMKEDYSYIME--TKERTKE-QIHQGEERLTELKRQCVEK 280
Query: 218 EKDVERVRQRAELLEKVESMKKKLPW 243
E+ + + + + +ES+K ++ W
Sbjct: 281 EERFQSIAGLSTMKTNLESLKHEMAW 306
Score = 81 (33.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 49/225 (21%), Positives = 104/225 (46%)
Query: 657 KLQKEREEIINIVQIEKRKRREMENHINLRKRKL-ESIEKEDDINTALAKLVDQAADLNI 715
+++K+ I + ++I + + ++ + ++ +L E+ +K DI L K+ ++ N
Sbjct: 311 EIEKQLNAIRDNIKIGEDRAARLDRKMEEQQVRLNEAEQKYKDIQDKLEKISEET---NA 367
Query: 716 QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYED 775
+ A E L ++V+ K +Y E A + ++ + E + K E+L + E+
Sbjct: 368 R----APECMALKADVVAKKRAYNE---AEVLYNRSLNEYKALKKDDEQLCKRI----EE 416
Query: 776 CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT----IEELEAAIQDNISQANS 831
KK + + +RQ + I+++ E K F + IE+ + AI+ + +
Sbjct: 417 LKKSTDQSLEP-ERLERQ-KKISWLK-ERVKAFQNQENSVNQEIEQFQQAIEKDKEEHGK 473
Query: 832 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
I ++ + QRQ+++L + D+ LKRF + AL E
Sbjct: 474 IKREELDVKHALSYNQRQLKELKDSK-TDR--LKRFGPNVPALLE 515
Score = 49 (22.3 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 755 LEFNLKQHEKLALQASLHYEDCK 777
LE ++K +E+L + LHY++ K
Sbjct: 718 LEKDIKHNEELLKRCQLHYKELK 740
Score = 47 (21.6 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 11/55 (20%), Positives = 31/55 (56%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
++IEK + I + ++ + R + +++ + + ++ L + + KD++DK K+
Sbjct: 310 NEIEKQLNAIRD-NIKIGEDRAARLDRK--MEEQQVRLNEAEQKYKDIQDKLEKI 361
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 745 SIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEH 782
S + D++I +LE ++ L H +K+++H
Sbjct: 687 SRDVDSEISDLENEVENKTAQILNLQQHLSALEKDIKH 724
Score = 41 (19.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME 417
+++E +QIL L Q+ L EK+ + N+ L++C K+++
Sbjct: 699 NEVENKTAQILNL-----QQHLSALEKD--IKHNEELLKRCQLHYKELK 740
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 652 EDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKE 696
ED AA+L ++ EE + + + E+ K +++++ KLE I +E
Sbjct: 327 EDRAARLDRKMEEQQVRLNEAEQ-KYKDIQD-------KLEKISEE 364
>UNIPROTKB|P50532 [details] [associations]
symbol:smc4 "Structural maintenance of chromosomes protein
4" species:8355 "Xenopus laevis" [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0006281 GO:GO:0006310
GO:GO:0046982 GO:GO:0007076 GO:GO:0007062 KO:K06675 SUPFAM:SSF75553
CTD:10051 HOVERGEN:HBG106696 EMBL:U13673 PIR:A55094
RefSeq:NP_001081371.1 UniGene:Xl.927 ProteinModelPortal:P50532
IntAct:P50532 GeneID:397799 KEGG:xla:397799 Xenbase:XB-GENE-5865892
Uniprot:P50532
Length = 1290
Score = 116 (45.9 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 78/340 (22%), Positives = 142/340 (41%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
+D+ K+ KE +E + + + + + NL+K + E++ + + A K +++
Sbjct: 897 QDKLDKVTKEIDECASAITKAQVSIKTADR--NLKKSE-EAVARTEKEIVANDKSIEELT 953
Query: 712 -DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS 770
DL + K A + N E E+H + ++ I+E E L +K AL
Sbjct: 954 EDLKKLEEK-ATTVMNECKEAECSLPEVQEQHRSLLQEIKAIQEKEHAL---QKEALNIR 1009
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE--MPTTI-EELEAAIQDNIS 827
L+ E H +H S K + I I+ ++ E +P EELEA I+D
Sbjct: 1010 LNIEQIDS---HIAEHQSKIKYWQKEITKISLHKIEDIPEEVLPGLAQEELEA-IKDPDQ 1065
Query: 828 QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK---ELKRFLAEIDALKEKW----LP 880
N I L E + I + K+E + EL E D+ + +
Sbjct: 1066 IINQIALLEAKS-HEMKPNLGAIAEYKKKEELYLQRVAELDEITNERDSFRRAYEDLRKQ 1124
Query: 881 TLRNLVAQIN---ETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQLEVL 935
L +A N N+Q + + G+ L+ +S D F GI+ V+ + ++
Sbjct: 1125 RLNEFMAGFNIITNKLKENYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKSWKKIF 1183
Query: 936 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
+ SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1184 NL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1220
Score = 108 (43.1 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 63/248 (25%), Positives = 114/248 (45%)
Query: 648 QRLIEDEA-AKLQ-KEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALA 704
Q L E E K Q KE E + +K ++++ME ++ K++ E + EK + +
Sbjct: 820 QSLSEQEVHLKAQVKELEVNVAAAAPDKNQQKQMEKNLETLKKEYEKVAEKAGKVEAEVK 879
Query: 705 KLVDQAADLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEF-DAKIRELEFNLKQH 762
+L D+N + K + + + EI C S K SI+ D +++ E + +
Sbjct: 880 RLHKLIVDINNHKLKAQQDKLDKVTKEIDECA-SAITKAQVSIKTADRNLKKSEEAVART 938
Query: 763 EK--LALQASLHY--EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
EK +A S+ ED KK E +++ K +AE E + L+ I+E
Sbjct: 939 EKEIVANDKSIEELTEDLKKLEEKATTVMNECK-EAECSLPEVQEQHRSLLQEIKAIQEK 997
Query: 819 EAAIQD-------NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEAD-KKELKRFLA- 869
E A+Q NI Q +S +Q+ ++ + Q++I +S + D +E+ LA
Sbjct: 998 EHALQKEALNIRLNIEQIDSHIAEHQSKIKYW---QKEITKISLHKIEDIPEEVLPGLAQ 1054
Query: 870 -EIDALKE 876
E++A+K+
Sbjct: 1055 EELEAIKD 1062
Score = 103 (41.3 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 59/245 (24%), Positives = 105/245 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 78 ITHIVNQNFKSYAGERILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 136
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E ++ I GD E + + R N S + +GK
Sbjct: 137 SVLIHNSDEHKDVQSCTVEVHFQKIIDKEGDDFEVIPNSNFYVSRTAYKDNSSVYHISGK 196
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P E E + + +
Sbjct: 197 KATFKDVGLLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSER 256
Query: 186 LVEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLE-KVESMKKKL 241
L E L + +E ++ G+ LN++K VE+EKD +E + +A E L + E+ KKK
Sbjct: 257 LKEPIQILCRRVELLNEQRGEKLNRVKM--VEKEKDALEGEKNKAIEFLTVENETFKKKN 314
Query: 242 PWLKY 246
+Y
Sbjct: 315 QLCQY 319
Score = 92 (37.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 36/151 (23%), Positives = 75/151 (49%)
Query: 740 EKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAF 799
EK ++E + K + +EF ++E + L C+ + +K D + Q E I
Sbjct: 286 EKEKDALEGE-KNKAIEFLTVENETFKKKNQL----CQYYIHDLQKRSRDKEAQKEKIQE 340
Query: 800 ITPELEKEFLEMPTTIEELEAAIQDNISQANSIF-FLNQNILQEYEHRQRQIEDLSTKQE 858
T ++ ++ + T++E A++D Q N I F+ +N +E + Q ++D+ T+++
Sbjct: 341 DTKDISEKSNTLLETMKEKNKALKDVEKQLNKITKFIEEN--RE-KFTQLDLQDVDTREK 397
Query: 859 A--DKKELKRFLAEIDALKEKWLPTLRNLVA 887
K ++K+ ++ KEK + L+N+ A
Sbjct: 398 LKHSKSKVKKLQKQLQKDKEK-VDELKNVPA 427
Score = 81 (33.6 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 51/246 (20%), Positives = 104/246 (42%)
Query: 647 EQRLIED--EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTAL 703
E +L D A ++Q + + V ++ REM+N L+S+ E+E + +
Sbjct: 774 ENKLKTDTTRATEIQDRKAHLEEEVAKLRQATREMKNTFEKYTASLQSLSEQEVHLKAQV 833
Query: 704 AKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAK-IRELEFNLKQ 761
+L V+ AA + + +E KNL E + ++ + +E + K + +L ++
Sbjct: 834 KELEVNVAAAAPDKNQQKQME-KNL--ETLKKEYEKVAEKAGKVEAEVKRLHKLIVDINN 890
Query: 762 HEKLALQASL-----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 816
H+ A Q L ++C + + + A R + EKE + +IE
Sbjct: 891 HKLKAQQDKLDKVTKEIDECASAITKAQVSIKTADRNLKKSEEAVARTEKEIVANDKSIE 950
Query: 817 ELEAAIQDNISQANSIFFLNQNI------LQEYEHRQ--RQIEDLSTKQEADKKELKRFL 868
EL ++ +A ++ + +QE +HR ++I+ + K+ A +KE
Sbjct: 951 ELTEDLKKLEEKATTVMNECKEAECSLPEVQE-QHRSLLQEIKAIQEKEHALQKEALNIR 1009
Query: 869 AEIDAL 874
I+ +
Sbjct: 1010 LNIEQI 1015
Score = 73 (30.8 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 25/129 (19%), Positives = 55/129 (42%)
Query: 749 DAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF 808
D +++++E LK A + ++EV R+ + K E L ++
Sbjct: 767 DDQLQKMENKLKTDTTRATEIQDRKAHLEEEVAKLRQATREMKNTFEKYTASLQSLSEQE 826
Query: 809 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 868
+ + ++ELE + N + +N L+ + ++ + + K EA+ K L + +
Sbjct: 827 VHLKAQVKELEVNVAAAAPDKNQQKQMEKN-LETLKKEYEKVAEKAGKVEAEVKRLHKLI 885
Query: 869 AEIDALKEK 877
+I+ K K
Sbjct: 886 VDINNHKLK 894
Score = 70 (29.7 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 32/135 (23%), Positives = 65/135 (48%)
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC--EFAK-LSPV-KLLEETEKAVGDPQLP 180
K K ++ E TK + + N L + + + + K L+ + K +EE + QL
Sbjct: 331 KEAQKEKIQEDTKDISEKSNTLLETMKEKNKALKDVEKQLNKITKFIEENREKF--TQLD 388
Query: 181 VQHCALVEK----SSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKV-E 235
+Q EK SK+K ++ ++++ + +++LK + +K + + +LLEK E
Sbjct: 389 LQDVDTREKLKHSKSKVKKLQKQLQKDKEKVDELKNVPANSQKIIAEETNKKDLLEKQKE 448
Query: 236 SMKKKLPWLKYDMKK 250
++KL + +KK
Sbjct: 449 KEEEKLKNVMDSLKK 463
Score = 52 (23.4 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 12/42 (28%), Positives = 26/42 (61%)
Query: 384 QANQKRLQKSEKEKILNQNKL--TLRQCSDRLKDMEDKNNKL 423
+A ++++Q+ K+ N L T+++ + LKD+E + NK+
Sbjct: 332 EAQKEKIQEDTKDISEKSNTLLETMKEKNKALKDVEKQLNKI 373
Score = 50 (22.7 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 373 KLGSQILELGVQANQKRLQKSE--KEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
K +Q+ + + QKR + E KEKI K + + L+ M++KN L
Sbjct: 311 KKKNQLCQYYIHDLQKRSRDKEAQKEKIQEDTKDISEKSNTLLETMKEKNKAL 363
Score = 49 (22.3 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 34/161 (21%), Positives = 68/161 (42%)
Query: 390 LQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR--NSGAENIFEAYCWLQQHRH 447
LQK ++K + K+ + KD+ +K+N LL ++ N +++ + + +
Sbjct: 324 LQKRSRDKEAQKEKI-----QEDTKDISEKSNTLLETMKEKNKALKDVEKQLNKITKFIE 378
Query: 448 ELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPIL 507
E N+E + + L+ +V R + + V + K + +D D L KN+ I+
Sbjct: 379 E-NREKFTQLDLQ-DVDTREKLKHSKSKVKK-LQKQ-LQKDKEKVDEL-KNVPANSQKII 433
Query: 508 NYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEV 548
+N+ E + EE + + L + KEV
Sbjct: 434 AEETNKKDLLEKQKEKEEEKLKNVMDSLKKETQGLQEEKEV 474
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 15/64 (23%), Positives = 32/64 (50%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
+ E +L +DE L+K +E+ ++V E ++N + ++K+E N +
Sbjct: 537 ELETKLPKDEG-DLKKREKELESLVSEEGN----IKNQVRELRQKVEEARSSLSANRSRG 591
Query: 705 KLVD 708
K++D
Sbjct: 592 KVLD 595
Score = 39 (18.8 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 379 LELGVQANQKRLQKSEKEK-ILNQNKLTLRQCSDRLKDMEDK 419
L++ + + L + K K LN TL++ +K++E K
Sbjct: 500 LDIYLSRHNSALSQLNKAKEALNTASATLKERRAAIKELETK 541
>FB|FBgn0040283 [details] [associations]
symbol:SMC1 "SMC1" species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0008278 "cohesin
complex" evidence=ISS;IDA;NAS] [GO:0007062 "sister chromatid
cohesion" evidence=ISS;NAS] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IGI] [GO:0005694 "chromosome" evidence=IDA] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0016319 "mushroom body
development" evidence=IMP] [GO:0016322 "neuron remodeling"
evidence=IMP] [GO:0035327 "transcriptionally active chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005700
"polytene chromosome" evidence=IDA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0006281 GO:GO:0016322 GO:GO:0048813 GO:GO:0006310
GO:GO:0016319 GO:GO:0010629 GO:GO:0030261 GO:GO:0005700
GO:GO:0035327 GO:GO:0008278 GO:GO:0007062 SUPFAM:SSF75553
HSSP:Q9X0R4 EMBL:AF225909 EMBL:AJ271845 STRING:Q9N6I4
FlyBase:FBgn0040283 InParanoid:Q9N6I4 OrthoDB:EOG4QNKB0
Uniprot:Q9N6I4
Length = 1238
Score = 135 (52.6 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 63/237 (26%), Positives = 104/237 (43%)
Query: 26 IELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLG--------R 76
IE+ NF ++ H++ P + N VIGPNGSGKS+ + AI+ +G T L
Sbjct: 30 IEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLNDLIH 89
Query: 77 ATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEIT 136
+SIG V R S Y+ + +E H+ R + SE+ NG+ V L
Sbjct: 90 GSSIGNPVSR---SCYVTAKFVLN-EERHMDFQRAV-IGGSSEYRINGESVSSSTYLNKL 144
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS--SKLK 194
++ I V + Q V A +P + E+ G L + L ++ ++ +
Sbjct: 145 EKIGINVKAKNFLVFQGAVENIAMKTPKERTALFEEISGSGLLKDDYNRLKQEMIVAEEE 204
Query: 195 TIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK-VESMKKKLPWLKYDMKK 250
T K+ G + +A + + E D R + E EK VE +L ++ D++K
Sbjct: 205 TQFTYQKKKGIAAERKEAKHEKMEAD-RYTRLQNEYNEKQVEYQLFRLFHVERDIRK 260
Score = 95 (38.5 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 69/345 (20%), Positives = 137/345 (39%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+E +Q E + + + E R +E++ K K+E K+D A + VD
Sbjct: 858 VERWERSVQDEEDALEGLKLAEARYLKEIDED----KEKMEKF-KQD--KQAKKQAVD-- 908
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE--FDAKIRELEFNLKQHEKLALQ 768
D+ K ++ NL EI + H++++E +AK E + L Q + +
Sbjct: 909 -DMEEDISKARKDVANLAKEIHN-----VGSHLSAVESKIEAKKNERQNILLQAKTDCIV 962
Query: 769 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT-PELEKEFLEMPT------TIEELEAA 821
L V + E+I + L +E+ ++ T E L+
Sbjct: 963 VPLLRGSLDDAVRQSDPDVPSTSAAMENIIEVDYSSLPREYTKLKDDSAFKKTHEMLQKD 1022
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE----K 877
+Q + I N LQ+ + +++ + + E +K+ KR A + +K +
Sbjct: 1023 LQSKLDVLERIQTPNMKALQKLDAVTEKVQSTNEEFENARKKAKRAKAAFERVKNERSSR 1082
Query: 878 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSA 937
++ +++ I+ + + + A + D E + GI G+
Sbjct: 1083 FVACCQHISDAIDGIYKKLARNEAAQAYIGPDNPEEPYLD-GI--NYNCVAPGK-RFQPM 1138
Query: 938 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
++ SGGE++++ + L S PF V+DEI+ +D N K+
Sbjct: 1139 NNLSGGEKTIAALALLFSTHSFHPAPFFVLDEIDAALDNTNIGKV 1183
Score = 76 (31.8 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 47/218 (21%), Positives = 92/218 (42%)
Query: 671 IEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIE--IKNLL 728
+ ++ +R E H+ K + E +++E + + K Q+ ++ +E +K +
Sbjct: 685 LARKAKRWDEKHMAQLKMQKERLQEE--LKELVKKSRKQSELATVESQIKGLENRLKYSM 742
Query: 729 VEIVSCKWSYAE--KHMASI-----EFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVE 781
V++ S K S ++ + + EF KI E+E ++ E+ H ++ K+ +
Sbjct: 743 VDLESSKKSISQYDNQLQQVQSQLDEFGPKILEIERRMQNREE-------HIQEIKENMN 795
Query: 782 HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANS-IFFLNQ-NI 839
+ + + + + I E+E L M A + I NS + F Q +
Sbjct: 796 NVEDKVYASFCRRLGVKNIRQYEERE-LVMQQERARKRAEFEQQIDSINSQLDFEKQKDT 854
Query: 840 LQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+ E +R ++D E K R+L EID KEK
Sbjct: 855 KKNVERWERSVQDEEDALEGLKLAEARYLKEIDEDKEK 892
Score = 67 (28.6 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 52/252 (20%), Positives = 113/252 (44%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQ 709
+ED+ R + NI Q E+R+ M+ R RK E++ D IN+ L +
Sbjct: 797 VEDKVYASFCRRLGVKNIRQYEEREL-VMQQE---RARKRAEFEQQIDSINSQLDFEKQK 852
Query: 710 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLAL-- 767
N+++++ +++ + +E K + A +++ I+ D + E KQ +K A+
Sbjct: 853 DTKKNVERWERSVQDEEDALE--GLKLAEA-RYLKEIDEDKEKMEKFKQDKQAKKQAVDD 909
Query: 768 ------QASLHYEDCKKEVEHCRKHLS--DAKRQAESIAF--ITPELEKEFLEMPTTIEE 817
+A + KE+ + HLS ++K +A+ I + + + + +P
Sbjct: 910 MEEDISKARKDVANLAKEIHNVGSHLSAVESKIEAKKNERQNILLQAKTDCIVVPLLRGS 969
Query: 818 LEAAIQDNISQANSIFFLNQNILQ-EYEHRQRQ---IEDLSTKQEADKKELKRFLAEIDA 873
L+ A++ + S +NI++ +Y R+ ++D S ++ + K +++D
Sbjct: 970 LDDAVRQSDPDVPSTSAAMENIIEVDYSSLPREYTKLKDDSAFKKTHEMLQKDLQSKLDV 1029
Query: 874 LKEKWLPTLRNL 885
L+ P ++ L
Sbjct: 1030 LERIQTPNMKAL 1041
Score = 66 (28.3 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 50/223 (22%), Positives = 101/223 (45%)
Query: 735 KWSYAEKHMASIEFDAK-----IREL-EFNLKQHEKLALQASLH-YEDCKK----EVEHC 783
+W EKHMA ++ + ++EL + + KQ E +++ + E+ K ++E
Sbjct: 691 RWD--EKHMAQLKMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLKYSMVDLESS 748
Query: 784 RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI-------FF-- 834
+K +S Q + + E + LE+ ++ E IQ+ N++ F
Sbjct: 749 KKSISQYDNQLQQVQSQLDEFGPKILEIERRMQNREEHIQEIKENMNNVEDKVYASFCRR 808
Query: 835 LNQNILQEYEHRQRQIEDLSTKQEAD-KKELKRFLAEIDALKEKWLPTLRNLVAQINETF 893
L +++YE R+ ++ ++ A+ ++++ +++D K+K T +N+ E +
Sbjct: 809 LGVKNIRQYEERELVMQQERARKRAEFEQQIDSINSQLDFEKQK--DTKKNV-----ERW 861
Query: 894 SRNFQEMAVAGE-VSLDE----HESDFDKFGILIKVKFRQSGQ 931
R+ Q+ A E + L E E D DK + KF+Q Q
Sbjct: 862 ERSVQDEEDALEGLKLAEARYLKEIDEDKEKM---EKFKQDKQ 901
Score = 56 (24.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 29/166 (17%), Positives = 76/166 (45%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
++T + + ++K +++ ++ ++KR E+EN +R+ +S+ E+ +
Sbjct: 342 LETAREADNAHQSDIRKLEKQLADVEALKKRFEDEIENE---SQRRGKSVNMEEGLVQEY 398
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE--FDAKIRELEFNLKQ 761
+L Q A+ Q++ ++ N + AS+E F + E +K+
Sbjct: 399 DRL-KQEAEATATQYRSELDSVNREQKSEQDTLDGETNRRASVEESFKKLTLQREEAVKR 457
Query: 762 HEKL-----ALQASLHYE-----DCKKEVEHCRKHLSDAKRQAESI 797
+KL + QA+L + + +++V ++ +++ +R+ E +
Sbjct: 458 RDKLMDHIKSSQAALEEQNRIKDELRRDVGTSKEKIAEKQRELEDV 503
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/236 (17%), Positives = 102/236 (43%)
Query: 669 VQIEKRKRREMENHINLRKRKLESI-EKEDDINTAL-AKLVDQAADLNIQQFKYAIEIK- 725
+QI K + E+E + L +++ + E+ +I+ +LV Q+ + A+
Sbjct: 579 IQILKEQMLEVETFLPLDYLQVKPLKERLRNISDPRNVRLVFDVLKFEPQEIERAVLFAT 638
Query: 726 -NLLVEIVSCKWSYAEKHMASIEFD-AKIRELEFNLKQHEKLALQASLHYEDCKKEVEHC 783
N LV C+ + + + E D ++ L + ++K L + ++ +K
Sbjct: 639 GNALV----CE-TPEDAMKVAYEIDRSRFDALALDGTFYQKSGLISGGSHDLARKAKRWD 693
Query: 784 RKHLSDAKRQAESIAFITPELEKEFLEMP--TTIEELEAAIQDNISQANSIFFLNQNILQ 841
KH++ K Q E + EL K+ + T+E +++ + + ++ +
Sbjct: 694 EKHMAQLKMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLKYSMVDLESSKKSIS 753
Query: 842 EYEHRQRQIEDLSTKQEADKK--ELKRFLAEIDALKEKWLPTLRNLVAQINETFSR 895
+Y+++ +Q++ S E K E++R + + ++ + N+ ++ +F R
Sbjct: 754 QYDNQLQQVQ--SQLDEFGPKILEIERRMQNREEHIQEIKENMNNVEDKVYASFCR 807
Score = 48 (22.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 33/151 (21%), Positives = 65/151 (43%)
Query: 648 QRLIEDEAAKLQKEREEIIN----IVQIEKRKRREMENHINLRKRKLESIEKEDDINT-A 702
++ EDE + R + +N +VQ R ++E E + +L+S+ +E
Sbjct: 370 KKRFEDEIENESQRRGKSVNMEEGLVQEYDRLKQEAEATATQYRSELDSVNREQKSEQDT 429
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-ELEFNL-K 760
L ++ A + + FK + V+ + + A++E +I+ EL ++
Sbjct: 430 LDGETNRRASVE-ESFKKLTLQREEAVKRRDKLMDHIKSSQAALEEQNRIKDELRRDVGT 488
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAK 791
EK+A + ++E+E R L DAK
Sbjct: 489 SKEKIA--------EKQRELEDVRDQLGDAK 511
Score = 39 (18.8 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 391 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNN-KLLHALRNSGAENIFEAYCWLQQHRH-- 447
Q E E L + L ++ +RL+++ D N +L+ + + I A + +
Sbjct: 585 QMLEVETFLPLDYLQVKPLKERLRNISDPRNVRLVFDVLKFEPQEIERAVLFATGNALVC 644
Query: 448 ELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPIL 507
E ++A V E++ S R A L+ G + KS + G D LA+ K +D
Sbjct: 645 ETPEDAM-KVAYEIDRS-RFDALALD---GTFYQKSGLIS-GGSHD-LARKAKRWDE--- 694
Query: 508 NYVSNESSRKEPFQISEEMRAL 529
+++ +KE Q EE++ L
Sbjct: 695 KHMAQLKMQKERLQ--EELKEL 714
Score = 38 (18.4 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 389 RLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
R K EK + Q K+ + + LK++ K+ K
Sbjct: 687 RKAKRWDEKHMAQLKMQKERLQEELKELVKKSRK 720
>MGI|MGI:1922974 [details] [associations]
symbol:Ccdc18 "coiled-coil domain containing 18"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1922974
HSSP:P01096 GeneTree:ENSGT00700000104188 EMBL:AK040158
EMBL:AK040607 EMBL:AK006197 EMBL:BC082598 IPI:IPI00377612
IPI:IPI00406830 IPI:IPI00844610 IPI:IPI00844715 RefSeq:NP_082757.1
UniGene:Mm.441231 ProteinModelPortal:Q640L5 PhosphoSite:Q640L5
PRIDE:Q640L5 Ensembl:ENSMUST00000047677 GeneID:73254 KEGG:mmu:73254
UCSC:uc008ynr.1 UCSC:uc008yns.1 CTD:343099 eggNOG:NOG122048
HOGENOM:HOG000111405 HOVERGEN:HBG095601 InParanoid:Q640L5
OMA:RECKMEI OrthoDB:EOG42BX82 NextBio:337772 Bgee:Q640L5
CleanEx:MM_CCDC18 Genevestigator:Q640L5 Uniprot:Q640L5
Length = 1455
Score = 137 (53.3 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 79/375 (21%), Positives = 165/375 (44%)
Query: 654 EAAKLQKERE-EIINIVQIEKRKRREMEN-HINLRKRKLESIEKEDDINTALAKLVDQAA 711
E +LQ E E+ +Q + E++N H L+ + E D + A L ++
Sbjct: 925 ELERLQHHTETELTETMQKREALENELQNAHGELKSTLRQLQELRDVLQKAQLSLEEKYT 984
Query: 712 ---DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE----- 763
DL + + +EI++ E++ + E++ + A++ L+ +++H
Sbjct: 985 TIKDLTAELRECKMEIEDKKQELIEMDQALKERNWELKQRAAQVTHLDMTIREHRGEMEQ 1044
Query: 764 ---KL--ALQAS-LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE- 816
KL L+ S L ++C K+VE + L +AK Q FI + E+E ++ IE
Sbjct: 1045 KIIKLEGTLEKSELELKECNKQVESLNEKLQNAKEQLREKEFIMLQNEQEISQLKKEIER 1104
Query: 817 ------ELEAAI---QDNIS-QANSIFFLNQNILQEYEHRQRQIEDL--STKQEAD-KKE 863
E+E+ I +D I+ Q + L Q + E Q +L + +QE ++E
Sbjct: 1105 TQQRMKEMESVIKEQEDYIATQYKEVIDLGQELRLTQEQMQNTHSELVEARRQEVQAQRE 1164
Query: 864 LKRFLAEIDALKE--KWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 921
++R E++ +K+ K N +A+ E + +E + + +++ K
Sbjct: 1165 IERLAGELEDIKQLSKEKEAHGNRLAE--ELGASQVREAHLEARM-----QAEIKKLSSE 1217
Query: 922 IKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPI-NER 980
+ +++ Q+E++S H ++ + +S S+Q L + E+ + D + N
Sbjct: 1218 VD-SLKEAYQIEMIS-HQENHAKWKLSAESQKTSVQQLNEQLEKAKQELEEAQDTVSNLH 1275
Query: 981 KMFQ---QLVRAASQ 992
+ Q +++ AA++
Sbjct: 1276 QQVQDRNEVIEAANE 1290
Score = 67 (28.6 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 12/49 (24%), Positives = 29/49 (59%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME 417
+++ K+ +I+ L K +Q S+ + +L+Q K L + ++ +K++E
Sbjct: 879 EELSKMEKEIIHLKRDGENKSMQLSQLDMVLDQTKTELEKTTNSVKELE 927
Score = 66 (28.3 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 26/115 (22%), Positives = 56/115 (48%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
E+LE + N +T+ Q + E K K++ + A + +L + L+EK+
Sbjct: 559 ELLEKASNASKLENEMTKKCSQLLILE--KQLEEKIIAYSSIAAKNAELEQE---LMEKN 613
Query: 191 SKLKTIECTVKRNGDTL----NQLKALNVEQEKDVER-VRQRAELLEKVESMKKK 240
K++++E + + + + K +++EQ K++E+ + Q LEK + K+
Sbjct: 614 EKIRSLESNINTEHEKICFAFEKAKKIHLEQHKEMEKQIEQLETQLEKRDQQFKE 668
Score = 62 (26.9 bits), Expect = 9.3e-08, Sum P(3) = 9.3e-08
Identities = 34/156 (21%), Positives = 70/156 (44%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKGE-VLEITKRFNIQVNNLTQFLPQDRVCEFAK 160
KEE + +++ RNK + F ++ K E V + K I+ +NL + Q+ + +
Sbjct: 737 KEELALHLNQLE-RNKEK--FERQLKKKSEEVYCLQKELKIKTHNLEETSEQNAILQHTL 793
Query: 161 LSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE-- 218
++L++ G+ + Q + +EK + E +R T +L+ + + E
Sbjct: 794 QQQQQMLQQETMRNGELE-DTQ--SKLEKQVSKQEQELQKQRESST-EKLRKMEEKYETA 849
Query: 219 -KDVERVRQRA-ELLEKVESMKKKLPWLKYDMKKAE 252
++V+ RQ+ EL K ++ K ++ K E
Sbjct: 850 IREVDLKRQKIIELTGTARQAKLEMDQYKEELSKME 885
Score = 46 (21.3 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 12/81 (14%), Positives = 40/81 (49%)
Query: 164 VKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVER 223
+ +LE ++ + +P+ ++ +++ + ++ D L Q + + +E+E ++
Sbjct: 158 IAMLESAQEQAAN--IPILEEQIINLEAEVSAQDKVLREAEDKLEQSQKMVIEKEHSLQE 215
Query: 224 VRQ-----RAELLEKVESMKK 239
++ + +LLE+ + K+
Sbjct: 216 AKEECIKLKVDLLEQSKQGKR 236
Score = 44 (20.5 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEK---ILNQNKLTLR---QCSDRLK-----DM 416
H ++EK QI +L Q ++ Q E+EK IL Q+ L + + DRL +M
Sbjct: 645 HKEMEK---QIEQLETQLEKRDQQFKEQEKTMSILQQDILCKQHHLESLDRLLTESKVEM 701
Query: 417 EDKNNKLLHALR 428
E +N K AL+
Sbjct: 702 EKENMKKDEALK 713
Score = 42 (19.8 bits), Expect = 9.1e-06, Sum P(3) = 9.1e-06
Identities = 17/75 (22%), Positives = 36/75 (48%)
Query: 160 KLSPVKLLEET--EKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQ 217
+ S +L++E EKA +L + + +K S+L +E ++ + + A N E
Sbjct: 549 RTSQFQLIQEELLEKASNASKLENE---MTKKCSQLLILEKQLEEKIIAYSSIAAKNAEL 605
Query: 218 EKDVERVRQRAELLE 232
E+++ ++ LE
Sbjct: 606 EQELMEKNEKIRSLE 620
Score = 38 (18.4 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 12/54 (22%), Positives = 28/54 (51%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+K S+ + +V + + N + L+ ++++ V Q L+ K+ES+ +L
Sbjct: 98 QKKSRDQVSFSSVSMDQEVKNLREKLHKLRQQNACLVTQNHSLMTKIESVHFEL 151
>UNIPROTKB|E2QUU0 [details] [associations]
symbol:TRIP11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000042 "protein targeting
to Golgi" evidence=IEA] InterPro:IPR000237 PROSITE:PS50913
GO:GO:0005634 GO:GO:0005794 GeneTree:ENSGT00700000104188
GO:GO:0000042 CTD:9321 EMBL:AAEX03005581 RefSeq:XP_537351.2
Ensembl:ENSCAFT00000017298 GeneID:480228 KEGG:cfa:480228
OMA:LESEVDH Uniprot:E2QUU0
Length = 1977
Score = 135 (52.6 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 72/363 (19%), Positives = 157/363 (43%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTALAKLVD- 708
++++ K Q+ER++++ ++ ++ + ++N + +LR ++L ++ + + L + D
Sbjct: 1533 MQEKTVKFQQERDQVMLALKQKQMENSALQNEVQHLRDKELRLNQELERLRNHLLESEDS 1592
Query: 709 ---QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE-KHMASIEFDAKIRELEFNLKQHEK 764
+A ++ K ++ L ++VS + H AS++ ++ +L KQ ++
Sbjct: 1593 YTREALAAEEREAKLRRKVTVLEEKLVSSSNAMENASHQASLQVESLQEQLNVVSKQRDE 1652
Query: 765 LALQASLHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEKE---FLEMPTTIEELEA 820
ALQ S+ E K+ + + Q E A + ELEK E E LE
Sbjct: 1653 TALQLSVSREQVKQYALSLSNLQMVLEHFQQEEKAVYSAELEKHKQLVAEWKKKAENLEG 1712
Query: 821 ---AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
++Q+ +AN+ + ++ + ++ QIE+L KQ ++E+ +D +++K
Sbjct: 1713 KLMSLQERFDEANAALDSASRLTEQLDLKEEQIEELK-KQNELRQEM------LDDVQKK 1765
Query: 878 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD--FDKFGILIKVKFRQSGQLEVL 935
+ + + ++++ RN G +H+ G ++ +K + QL
Sbjct: 1766 LMNLVNSTEGKVDKVLMRNL----FIGHFHTPKHQRHEVLRLMGSILGIKREEMEQL--- 1818
Query: 936 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINER--KMFQQLVRAASQP 993
H GG T + + N P R NQ +N ++F + + S P
Sbjct: 1819 -LHEDQGGVTRWMTGWLGGGSKSVPNTPLRP----NQ-QSVLNSSFSELFVKFLETESHP 1872
Query: 994 NTP 996
+ P
Sbjct: 1873 SVP 1875
Score = 88 (36.0 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 53/256 (20%), Positives = 98/256 (38%)
Query: 171 EKAVGDPQLPVQHCALVEKSSKLK-TIECTVKRNGDTLNQLKALNVEQE-KDVERVRQ-R 227
E VG Q+ ++ +VE K +E + R L + +A EQ +++ + R R
Sbjct: 696 ESIVGSNQMSLERNTIVEALKMEKGQLEAELSRADQRLLE-EASKYEQTIQELSKARDLR 754
Query: 228 AELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQE 287
L+ + KL K D + AE +++ E K + E
Sbjct: 755 TSALQLEQQHLMKLSQEK-DFEIAELKKNIEQMDTDHKETKAILSSILEEQKQLTQLISE 813
Query: 288 KAILDGDCKKLSSLINENSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKA 347
K I K+ SS + E ++ K++ K + + +
Sbjct: 814 KEIFIEKLKERSSELQEELEKSTQASRKIEILKQTIEEKDRSLGSMKEENNHLKEELERL 873
Query: 348 RXXXXXXXXXXQTVPAYEP-PHDKIEKLGSQILELGVQANQKRLQKSEKEKIL---NQNK 403
R + VP EP P D + +L S++L+L + + +KI+ NQ+K
Sbjct: 874 REQQS------RAVPVVEPKPLDSVTELESEVLQLNIVKRNLEEEIKRHQKIIEDQNQSK 927
Query: 404 LTLRQC-SDRLKDMED 418
+ L Q ++ K+M++
Sbjct: 928 MQLLQSLEEQKKEMDE 943
Score = 75 (31.5 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 42/171 (24%), Positives = 81/171 (47%)
Query: 99 GDTKEEHLTIMRKIDTRNKSEWFFNGKVVPK--GEVLEITK---RFNIQVNNLTQFLPQ- 152
G KEE+ + +++ + + V PK V E+ + NI NL + + +
Sbjct: 857 GSMKEENNHLKEELERLREQQSRAVPVVEPKPLDSVTELESEVLQLNIVKRNLEEEIKRH 916
Query: 153 DRVCEFAKLSPVKLL---EETEKAVGD-----PQLPVQHCAL-VEKSSKLKTIECTVKRN 203
++ E S ++LL EE +K + + Q+ V H L +EK ++K ++ T++
Sbjct: 917 QKIIEDQNQSKMQLLQSLEEQKKEMDEFKCQHEQMNVTHTQLFLEKDEEIKNLQKTIE-- 974
Query: 204 GDTLNQLKALNVEQEKDVERVRQRAELLE--KVESMKKKLPWLKYDMKKAE 252
Q+K E+ +DV+ + +E + KV+S+ + K+D+ KAE
Sbjct: 975 -----QIKTQWHEERQDVQM--ENSEFFQETKVQSLNLENGSEKHDLSKAE 1018
Score = 58 (25.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAY 439
EL VQ +++L +SE +LN L ++ ++++D+ D+ NK + N EN F
Sbjct: 557 ELNVQ--KEKLVQSEL--VLNGLHLAKQKLEEKVEDLVDQLNKSQKSNLNMQKEN-FGLK 611
Query: 440 CWLQQHRHELNK 451
++Q+ EL++
Sbjct: 612 EHIKQNEEELSR 623
Score = 57 (25.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 15/60 (25%), Positives = 39/60 (65%)
Query: 185 ALVEKSSKLKTIECTVKRNGDTL---NQLKALNVEQ-EKDVERVRQRAELLEKVESMKKK 240
+L EK + +KT++ R D++ ++L+ EQ + ++++++++ ++L+K S+K+K
Sbjct: 1353 SLQEKDATIKTLQENNHRLSDSIAATSELERKEHEQTDSEIKQLKEKQDVLQK--SLKEK 1410
Score = 56 (24.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 31/119 (26%), Positives = 58/119 (48%)
Query: 131 EVLEITKRFNIQVNN---LTQFLP--QDRVCEFAKLSPVKLLEETEKAVGDP-QLPVQHC 184
++L + + F +VN L Q + ++RV ++ KL EE EK V + ++
Sbjct: 1420 QLLSLNENFTNKVNENELLRQAVTNLKERVL-ILEMDIGKLKEENEKIVERTREKETEYQ 1478
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQ---EKDVERVRQRAELLEKVESMKKK 240
AL E + K + + ++ + K+L EQ EK+ + + +LL V+SM++K
Sbjct: 1479 ALQETNMKFSMMLREKEFECHSMKE-KSLAFEQLLKEKEQGKTGELNQLLNAVKSMQEK 1536
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 36/141 (25%), Positives = 60/141 (42%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQN----KLT--LRQCSDRLKDMEDKNNKL 423
+I KL S I EL Q + + + E + QN KLT R+ + L+D E++ +L
Sbjct: 211 EICKLQSIIKELK-QIRSQEIDDHQHEMSVLQNAHQQKLTDISRRHREELRDYEERIEEL 269
Query: 424 LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKS 483
+ L G+ + + + HE+ K L V++ LED + K
Sbjct: 270 ENLLEQGGSGIVIPDHSKI----HEMQKTIQN--LQTEKVASIKKIEELEDKIKDIDKK- 322
Query: 484 FITQDAGDRDFLAKNLKPFDV 504
++ DRD L K + +V
Sbjct: 323 -LSSAENDRDVLRKEKECLNV 342
Score = 51 (23.0 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 26/124 (20%), Positives = 54/124 (43%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E+ S+++ E T + D+ + K ++ +E++ E VR + L ++E + L + +D
Sbjct: 619 EELSRVRD-ELTQSLSRDSGSDFKD-DLLKEREAE-VRNLKQNLSEIEQLNDSLNKVAFD 675
Query: 248 MK--KAEYIXXXXXXXXXXXXXXXXXNTLH-EFSKPIEGKKQEKAILDGDCKKLSS-LIN 303
+K + + N + E + +E K EK L+ + + L+
Sbjct: 676 LKMENEKLVLACEDIRHQLEESIVGSNQMSLERNTIVEALKMEKGQLEAELSRADQRLLE 735
Query: 304 ENSK 307
E SK
Sbjct: 736 EASK 739
Score = 48 (22.0 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDM-EDKNNKLL-HALRN 429
E+ S+I +L + Q LQKS KEK L ++ SD+L + E+ NK+ + L
Sbjct: 1387 EQTDSEIKQL--KEKQDVLQKSLKEK-----DLLIKAKSDQLLSLNENFTNKVNENELLR 1439
Query: 430 SGAENIFEAYCWLQQHRHELNKE 452
N+ E L+ +L +E
Sbjct: 1440 QAVTNLKERVLILEMDIGKLKEE 1462
Score = 48 (22.0 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 30/117 (25%), Positives = 53/117 (45%)
Query: 366 PPHDKIEKLGSQILELGVQANQKRLQ---KSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
PP E LG + +++++ L+ KS +EK + TL++ + RL D ++
Sbjct: 1323 PPSQSAESLGMDKRDTSSESSKQELEELRKSLQEK--DATIKTLQENNHRLSDSIAATSE 1380
Query: 423 LL---HALRNSGAENIFEAYCWLQQHRHE--LNKEAYGPVLLEVN--VSNRAHANYL 472
L H +S + + E LQ+ E L +A LL +N +N+ + N L
Sbjct: 1381 LERKEHEQTDSEIKQLKEKQDVLQKSLKEKDLLIKAKSDQLLSLNENFTNKVNENEL 1437
Score = 44 (20.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 214 NVEQEKDVERVRQRAELLEKVESMKKKL 241
N++ EK V +++ EL +K++ + KKL
Sbjct: 297 NLQTEK-VASIKKIEELEDKIKDIDKKL 323
Score = 37 (18.1 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 274 LHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKR 308
+HE K I+ + EK ++L I + K+
Sbjct: 288 IHEMQKTIQNLQTEKVASIKKIEELEDKIKDIDKK 322
>ASPGD|ASPL0000008486 [details] [associations]
symbol:sudA species:162425 "Emericella nidulans"
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0000785
"chromatin" evidence=ISS] [GO:0007067 "mitosis" evidence=IGI;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008278
"cohesin complex" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005634 GO:GO:0005694 GO:GO:0051301 GO:GO:0007067
EMBL:AACD01000107 EMBL:BN001301 GO:GO:0051276 eggNOG:COG1196
SUPFAM:SSF75553 HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF
OrthoDB:EOG4TB7KF EMBL:U40146 PIR:S65799 RefSeq:XP_663968.1
ProteinModelPortal:Q00737 STRING:Q00737 GeneID:2871258
KEGG:ani:AN6364.2 Uniprot:Q00737
Length = 1215
Score = 114 (45.2 bits), Expect = 7.8e-08, Sum P(3) = 7.8e-08
Identities = 54/218 (24%), Positives = 92/218 (42%)
Query: 25 EIELHNFMTF-DHLICKPGS-RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGA 82
+I + F ++ D + +P S + N+++G NGSGKS+ AI L LGR A
Sbjct: 5 QIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVLSDAYTHLGREER-QA 63
Query: 83 YVKRGEESG----YIKISL-----RGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVL 133
+ G S Y++I R T + L + R I + K E+ + K K +V+
Sbjct: 64 LLHEGSGSAVMSAYVEIIFDNSDERFPTGKPELVLRRTIGLK-KDEYTLDRKNATKNDVM 122
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALV----EK 189
+ + +N +PQ RV + + L ++ G + + E
Sbjct: 123 NLLESAGFSRSNPYYIVPQGRVTALTNMKDSERLNLLKEVAGTQVYEARRAESLKIMHET 182
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVE----QEKDVER 223
+SK + I+ + + L +L+ E QEKD ER
Sbjct: 183 NSKREKIDELLDFINERLAELEEEKDELRNFQEKDKER 220
Score = 103 (41.3 bits), Expect = 7.8e-08, Sum P(3) = 7.8e-08
Identities = 42/174 (24%), Positives = 75/174 (43%)
Query: 841 QEYEHRQRQIEDLST-----KQEADKKELKRFLAEIDALKEKWLPTLRN-LVAQINETFS 894
+E + Q+ I+DL + K EA ++ K+ E + EK +P R L+ Q +T
Sbjct: 1011 EELDASQKSIDDLISVLDHRKDEAIERTFKQVSREFATIFEKLVPAGRGRLIIQ-RKTDR 1069
Query: 895 RNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLV 954
E + E +H + + G+ I V F + SGG++S+ + +
Sbjct: 1070 TQRAEDDLESEDEEAKHSVE-NYVGVGISVSFNSKHD-DQQRIQQLSGGQKSLCALALVF 1127
Query: 955 SLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQ--CFLLTPKLL 1006
++Q PF + DEI+ +D R Q+++ S Q C P++L
Sbjct: 1128 AIQACDPAPFYLFDEIDANLDA-QYRTAVAQMLKTISDSTNGQFICTTFRPEML 1180
Score = 96 (38.9 bits), Expect = 7.8e-07, Sum P(3) = 7.8e-07
Identities = 55/273 (20%), Positives = 123/273 (45%)
Query: 650 LIEDEAAKLQKEREEIINIVQIEKRKRREME---NHINLRKRKLESIEKEDDINTALAKL 706
L ++E A+L E + + VQ +R+ +E+ + + RK LE +E +++N L +L
Sbjct: 795 LTDEEEARL----ESLNSNVQEYRREYQELSGKRSELETRKSVLE-VELRENLNPRLDQL 849
Query: 707 VDQAADL-------NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL-EFN 758
+ Q AD+ NI++ + E K L + A+ + + ++++ EL + N
Sbjct: 850 LAQDADIADEDGQGNIKETQR--EQKRLTKVLDKLAQRLAQVDESMEQANSRVTELTQRN 907
Query: 759 LKQH---EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 815
+ E+LA H +K ++ A A +I + ++ F + T
Sbjct: 908 AESRRELEELAKSIEKHQRRMEKSMQKKAALTKQAAECAANIRDLGVLPDEAFTKYKNTD 967
Query: 816 EELEAAIQDNISQANSIF-FLNQNILQEYEHRQRQIEDLSTKQE---ADKKELKRFLAEI 871
+++A + +N+ ++Y + +Q E L++++E A +K + ++ +
Sbjct: 968 SNTVVKKLHKVNEALKKYAHVNKKAFEQYNNFTKQRETLTSRREELDASQKSIDDLISVL 1027
Query: 872 DALKEKWLPTLRNLVAQINETFSRNFQEMAVAG 904
D K++ + Q++ F+ F+++ AG
Sbjct: 1028 DHRKDE---AIERTFKQVSREFATIFEKLVPAG 1057
Score = 65 (27.9 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 51/227 (22%), Positives = 95/227 (41%)
Query: 648 QRLIE-DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 706
QRL + DE+ +++ + + Q RRE+E L K SIEK + K
Sbjct: 884 QRLAQVDES--MEQANSRVTELTQRNAESRRELEE---LAK----SIEKHQ---RRMEKS 931
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 766
+ + A L Q + A I++L V Y K+ S K+ ++ LK++ +
Sbjct: 932 MQKKAALTKQAAECAANIRDLGVLPDEAFTKY--KNTDSNTVVKKLHKVNEALKKYAHVN 989
Query: 767 LQASLHYEDCKKEVEHC---RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE-AAI 822
+A Y + K+ E R+ L +++ + + + + E +E E A I
Sbjct: 990 KKAFEQYNNFTKQRETLTSRREELDASQKSIDDLISVLDHRKDEAIERTFKQVSREFATI 1049
Query: 823 QDNISQANSIFFLNQNILQEYEHR-QRQIEDLSTKQEADKKELKRFL 868
+ + A + I+Q R QR +DL ++ E K ++ ++
Sbjct: 1050 FEKLVPAGR----GRLIIQRKTDRTQRAEDDLESEDEEAKHSVENYV 1092
Score = 48 (22.0 bits), Expect = 7.8e-08, Sum P(3) = 7.8e-08
Identities = 15/80 (18%), Positives = 42/80 (52%)
Query: 379 LELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDM----EDKNNKLLHALRNSGAEN 434
L ++ +Q+R++KS ++K + +C+ ++D+ ++ K + N+ +
Sbjct: 917 LAKSIEKHQRRMEKSMQKKAALTKQAA--ECAANIRDLGVLPDEAFTKYKNTDSNTVVKK 974
Query: 435 IFEAYCWLQQHRHELNKEAY 454
+ + L+++ H +NK+A+
Sbjct: 975 LHKVNEALKKYAH-VNKKAF 993
Score = 45 (20.9 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 28/119 (23%), Positives = 43/119 (36%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQK--RLQKSEKEKILNQNKL-TLRQCSDRLKDMEDKN 420
YE + ++ ++ EL + LQK E+++ QN LRQ +D+ K
Sbjct: 696 YETKKSRGSEIRKELEELDQLITRAVGELQKLEQQRHQVQNSSGPLRQELRSKRDLLQKQ 755
Query: 421 NKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHY 479
N L A R + NI L+ E P + A L +V Y
Sbjct: 756 NDNLDAKRRA-LRNIEGNLAALKDQVDAFEAELSSPFHKALTDEEEARLESLNSNVQEY 813
>ASPGD|ASPL0000075987 [details] [associations]
symbol:AN4597 species:162425 "Emericella nidulans"
[GO:0003917 "DNA topoisomerase type I activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006265 "DNA
topological change" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0000939
"condensed chromosome inner kinetochore" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 EMBL:BN001303
EMBL:AACD01000079 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 OMA:IAIEFLT HOGENOM:HOG000184777 OrthoDB:EOG4WM82V
RefSeq:XP_662201.1 ProteinModelPortal:Q5B4D3 STRING:Q5B4D3
EnsemblFungi:CADANIAT00005839 GeneID:2872396 KEGG:ani:AN4597.2
Uniprot:Q5B4D3
Length = 1476
Score = 124 (48.7 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 72/333 (21%), Positives = 145/333 (43%)
Query: 650 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRK--RKL-ESIEKEDDINTALAK 705
L+ +E + + R + +++ + R E E + N+ + +KL E + + + + +
Sbjct: 1075 LLSEEISNAEVARSKNEKLIKKHENARAEAEKELANVAEELQKLNEDVANQANDASGWKE 1134
Query: 706 LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 765
VD+A D + K A E+K + E+ E IE K+ E + L ++EK
Sbjct: 1135 KVDEAQDA--LESKKA-ELKTMKAELDEKVAELNETRATEIEMRNKLEENQKALAENEK- 1190
Query: 766 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM-PTTIEELEAAIQD 824
S ++++ K + +++SD + F T + E EM +++ AA+++
Sbjct: 1191 ---RSRYWQE--KLSKLTLQNISDLGEDQQPSEFQT-FTKDELAEMNKDSLKAAIAALEE 1244
Query: 825 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN 884
+Q +SI + ++++EY R + E S + +D L+ L
Sbjct: 1245 K-TQNSSI---DLSVIEEYRRRAAEHESRSADLATALAARDSAKSRLDGLRSARLNGFME 1300
Query: 885 LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQLEVLSAHHQSG 942
I+ +Q + + G L+ +S D F GIL V + + + SG
Sbjct: 1301 GFGIISLRLKEMYQMITMGGNAELELVDS-LDPFSEGILFSVMPPKKSWKNI---GNLSG 1356
Query: 943 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 975
GE+++S++ + +L P V+DEI+ +D
Sbjct: 1357 GEKTLSSLALVFALHHYKPTPLYVMDEIDAALD 1389
Score = 100 (40.3 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 58/247 (23%), Positives = 102/247 (41%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I + L+NF ++ + P + + V+GPNGSGKS+++ A+ G + R I
Sbjct: 247 ITTLVLNNFKSYAGKQVVGPFHASFSSVVGPNGSGKSNVIDALLFVFGFRASKM-RQGKI 305
Query: 81 GAYVKRG---------EESGYIK--ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
A + E Y + I L G E L I RK N S+++ NGK
Sbjct: 306 SALIHNSANHPNLPFCEVEVYFQEIIDLPGGEHEVVPDSQLIISRKAFKNNTSKYYMNGK 365
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
V + + I +++ + Q V A++ P K E E + +++
Sbjct: 366 ETNFTAVTTLLRDRGIDLDHKRFLILQGEVESIAQMKP-KAANEHEDGL------LEYLE 418
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
+ +SK K ++ L L + VE+ V+ V + L V+ K L +L+
Sbjct: 419 DIIGTSKYKQ---PIEEAATELEALNDVCVEKNNRVQHVEKEKNAL--VDKKDKALAYLR 473
Query: 246 YDMKKAE 252
+ + A+
Sbjct: 474 DENELAQ 480
Score = 85 (35.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 76/342 (22%), Positives = 145/342 (42%)
Query: 654 EAAKLQKEREEIINIVQIEKRKRRE--MENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E A LQ + E++N+ ++EK + E ++ KR ++ E+ + LAK + A
Sbjct: 501 EEAILQMQ--ELLNL-ELEKHEGNESGIKELEKAYKRAMKEYERMEKETQELAKGM---A 554
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL 771
+ + K+ E K LV K EK M S A E + +K+H + S
Sbjct: 555 KYDKETVKFE-EKKKFLVG----KQKKLEKAMTSARLAAS--ECQSLVKRHSEAIENKSK 607
Query: 772 HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI---QDNISQ 828
D + EVEH + L+ + ES+ T L + ++E + I Q ++
Sbjct: 608 ETADYENEVEHEEQELTKIR---ESLKGKTQGLSDQIAAKQKSLEPWDEKINKKQSELAV 664
Query: 829 ANS-IFFLNQN------ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
A S + L + +L+E + + IE+ ++E D +E K + ++ E+
Sbjct: 665 AQSELDILKEKSNAGAVLLEEAQSKITSIEETIARKEEDLQECKTQRSTLEDEVEQLQHD 724
Query: 882 LRNLVAQINETFSR--NFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHH 939
L+ + + + N ++ A ++ ++ L+++K +SG++E H
Sbjct: 725 LKKYSMKEPDVRAHVSNARQKAEEARATVASTQNRGSVLTGLMRLK--ESGRIE--GFHG 780
Query: 940 QSGGERSVSTILYLVSLQDLTNCPF---RVVDEINQGMDPIN 978
+ G ++ Y V++ T CP VVD + G I+
Sbjct: 781 RLGNLGTIDE-KYDVAIS--TACPALENMVVDTVEVGQQCID 819
Score = 57 (25.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 112 IDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP--VKL-LE 168
I+ ++K + +V + E E+TK + TQ L + L P K+ +
Sbjct: 602 IENKSKETADYENEV--EHEEQELTK-IRESLKGKTQGLSDQIAAKQKSLEPWDEKINKK 658
Query: 169 ETEKAVGDPQLPVQH------CALVEKS-SKLKTIECTVKRNGDTLNQLKALNVEQEKDV 221
++E AV +L + L+E++ SK+ +IE T+ R + L + K E +V
Sbjct: 659 QSELAVAQSELDILKEKSNAGAVLLEEAQSKITSIEETIARKEEDLQECKTQRSTLEDEV 718
Query: 222 ERVR 225
E+++
Sbjct: 719 EQLQ 722
Score = 42 (19.8 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 396 EKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
E+ + + + L++C + +ED+ +L H L+
Sbjct: 694 EETIARKEEDLQECKTQRSTLEDEVEQLQHDLK 726
>DICTYBASE|DDB_G0286403 [details] [associations]
symbol:smc4 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0007076 "mitotic chromosome condensation" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000796 "condensin complex" evidence=ISS] [GO:0000070 "mitotic
sister chromatid segregation" evidence=ISS] [GO:0051301 "cell
division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0286403 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0051301 GenomeReviews:CM000153_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0046982 EMBL:AAFI02000085 GO:GO:0007076
GO:GO:0000796 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 HSSP:P32908 RefSeq:XP_637730.1
ProteinModelPortal:Q54LV0 STRING:Q54LV0 EnsemblProtists:DDB0219935
GeneID:8625595 KEGG:ddi:DDB_G0286403 OMA:QENFDEN Uniprot:Q54LV0
Length = 1415
Score = 124 (48.7 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 68/328 (20%), Positives = 144/328 (43%)
Query: 669 VQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKY--AIE-IK 725
VQI K + ME I + E+ +++D+ ALA+++++ L + K A+E +
Sbjct: 1010 VQI-KSLAKSMEKSIKILN---ENTKEKDENEAALAEILEKYKSLEKENLKATEAMEAVS 1065
Query: 726 NLLVEIVSCKWSYAEKHMASIEFDAKIR----ELEFNLKQHEKLALQASLHYEDCKKEVE 781
L E ++H + + KI+ +LE +++ + L + DC +
Sbjct: 1066 EQLREKEEETKEIRKEHEKAKKVIEKIKVSNSKLETQIEEFKTLINEKQAEIADCLSKFA 1125
Query: 782 HCRKHLSDAKRQA-ESI-----AFITPELEKEFLE------MPTTIEELEAAIQDNISQA 829
+ K K ES+ A +TPE ++++E + I EL IQ IS+
Sbjct: 1126 NQAKKAKIYKDYVDESLINQVSAILTPEEIEQYMEATEQQNLIAKIHELTTQIQ-KISKE 1184
Query: 830 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQI 889
N++ N ++++++ ++++ + + +KE ++L++ L I
Sbjct: 1185 NNV---NIEVVKDFQKKEQEYHSRKAEFDEIEKERDNLSKRYESLRKNRLDEFMAGFTII 1241
Query: 890 NETFSRNFQEMAVAGEVSLD--EHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSV 947
+Q + + G+ L+ + E F + GI V+ + + + SGGE+++
Sbjct: 1242 TMKLKEIYQMITLGGDAELEIIDREDPFQE-GISFSVRPPKKSWKNISNL---SGGEKTL 1297
Query: 948 STILYLVSLQDLTNCPFRVVDEINQGMD 975
S++ + +L V+DEI+ +D
Sbjct: 1298 SSLALVFALHHYKPNALYVMDEIDAALD 1325
Score = 119 (46.9 bits), Expect = 3.8e-07, Sum P(5) = 3.8e-07
Identities = 70/279 (25%), Positives = 127/279 (45%)
Query: 651 IEDEAAKLQKEREEIIN-IVQIEKRKRREMENHINLRKRKLESIEKEDDIN-TALAKLVD 708
++++ KL+ E +EI N I+ + + + ++K K+ES++ D N T K
Sbjct: 958 VQEKVNKLESEVQEIQNSILNVGGPQ-------LKMQKNKVESLQSRIDSNQTNTTK--- 1007
Query: 709 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF-NLKQHEKLAL 767
A++ I+ ++E K++ + + K E A E K + LE NLK E A+
Sbjct: 1008 --ANVQIKSLAKSME-KSIKILNENTK-EKDENEAALAEILEKYKSLEKENLKATE--AM 1061
Query: 768 QA-SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 826
+A S + ++E + RK AK+ E I +LE + E T I E +A I D +
Sbjct: 1062 EAVSEQLREKEEETKEIRKEHEKAKKVIEKIKVSNSKLETQIEEFKTLINEKQAEIADCL 1121
Query: 827 SQ-ANSIFFLNQNILQEY--EHRQRQIEDLSTKQEADK----KELKRFLAEIDALKEKW- 878
S+ AN I ++Y E Q+ + T +E ++ E + +A+I L +
Sbjct: 1122 SKFANQA--KKAKIYKDYVDESLINQVSAILTPEEIEQYMEATEQQNLIAKIHELTTQIQ 1179
Query: 879 -LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFD 916
+ N+ ++ + F + QE + + DE E + D
Sbjct: 1180 KISKENNVNIEVVKDFQKKEQEYH-SRKAEFDEIEKERD 1217
Score = 73 (30.8 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 37/130 (28%), Positives = 61/130 (46%)
Query: 118 SEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK-------LLEET 170
S+++ N KVV ++ I K I ++N + Q V + A + P LLE
Sbjct: 277 SKYYLNDKVVKLDDLKTILKDKGIDLDNNRFLILQGEVEQIAMMKPKGVHPGEEGLLEYL 336
Query: 171 EKAVGDPQ-LPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE 229
E +G + LP +E +SKL IE + + N++K VE+EKD + ++R
Sbjct: 337 EDIIGSKKYLPD-----IEATSKL--IEDIGDKRTSSNNRMKV--VEKEKDALQ-QERDN 386
Query: 230 LLEKVESMKK 239
LE ++ K
Sbjct: 387 ALEYIDKELK 396
Score = 63 (27.2 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 48 VIGPNGSGKSSLVCAIALALG 68
V+GPNGSGKS+++ A+ G
Sbjct: 187 VVGPNGSGKSNVIDAMLFVFG 207
Score = 47 (21.6 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 392 KSEKEKILN-QNKLT-----LRQCSDRLKDMEDK 419
K +K+K++ Q+ L+ LRQC D L ++E++
Sbjct: 855 KEDKKKLIELQDNLSQLDSDLRQCRDELVEIENQ 888
Score = 44 (20.5 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 285 KQEKAILDGDCKKLSSLINENSKRRMDF 312
K+E L KK +S+I E +K++ +F
Sbjct: 483 KEETKHLKTKVKKNNSVIEEETKKQAEF 510
Score = 40 (19.1 bits), Expect = 5.5e-07, Sum P(5) = 5.5e-07
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILN-QNKLTLRQCSDRLKDMEDKNNKL 423
K E+L I +L N+ +L +KE+I + + L + Q S L +++K NKL
Sbjct: 916 KCEELTKVIPQL---KNKAKLSTEKKEQIDSIKESLIVDQKS--LDKVQEKVNKL 965
Score = 40 (19.1 bits), Expect = 0.00031, Sum P(4) = 0.00031
Identities = 32/132 (24%), Positives = 54/132 (40%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP----VKLLEETEKAVGDPQLPVQHCAL 186
++LE K Q L + Q C+ L+ VK EET+ ++ + +
Sbjct: 443 KLLEFEKNLKQQNKQLDELNKQMAKCKNELLTTEKKGVKYKEETKHL--KTKVKKNNSVI 500
Query: 187 VEKSSKLKTIE-CTVKRNGDTLN------QL-KALNVEQEKDVERVRQ-RAELLEKVESM 237
E++ K E T+ D + +L K L VE++K + + E+ E M
Sbjct: 501 EEETKKQAEFERSTIIHKQDIVRFEKEYVELPKELIVEEKKLESMLNSLKGEVTELQREM 560
Query: 238 KKK----LPWLK 245
++K LPW K
Sbjct: 561 EEKQKQLLPWSK 572
>UNIPROTKB|Q71YL3 [details] [associations]
symbol:smC "Chromosome partition protein Smc"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR024704
HAMAP:MF_01894 InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000036392 KO:K03529
TIGRFAMs:TIGR02168 OMA:GDITKFI RefSeq:YP_014424.1
ProteinModelPortal:Q71YL3 STRING:Q71YL3 GeneID:2797604
KEGG:lmf:LMOf2365_1831 PATRIC:20324957 ProtClustDB:CLSK2518461
Uniprot:Q71YL3
Length = 1186
Score = 129 (50.5 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 66/302 (21%), Positives = 125/302 (41%)
Query: 691 ESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDA 750
E+ E+++ LA L ++ + I+ L + A+ E
Sbjct: 842 ENYEQKEAAEQKLASLKTNLTSVHTSEESARKSIEELRKDKAETSEKLAQTRQTRAELQE 901
Query: 751 KIRELEFNLKQHEKLALQASLHYEDCKK-EVEHCRKHLSDAKR--QAESIAFITPELEKE 807
K+ LE L Q Q S + E E+ R + R + + +TPE +E
Sbjct: 902 KLELLEAELTQKNN---QISFYVEQKNNAEISIGRLEVDINNRIDRLQEAYLLTPEQAEE 958
Query: 808 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 867
+ E+ + ++ + + +N ++E+E Q + + L+ +Q+AD K
Sbjct: 959 KILPEVNTEQARSKVRLLKRSIDELGIVNIGAIEEFERIQERFDFLN-RQQADLLAAKET 1017
Query: 868 LAEI-DALKEKWLPTLRNLVAQINETFSRNFQEMAVAG--EVSLDEHESDFDKFGILIKV 924
L ++ D + E+ I F+ F E+ G E+ L + E+ GI I V
Sbjct: 1018 LFKVMDEMDEEMKIRFSESFEAIKTEFAIVFPELFGGGSAELVLLDPENLLTT-GIDIVV 1076
Query: 925 KFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQ 984
+ +L+ LS +SGGER+++ I L ++ + PF ++DE+ +D N + +
Sbjct: 1077 Q-PPGKKLQNLSL--RSGGERALTAIALLFAIIRVRPVPFCILDEVEAALDEANVTRFSR 1133
Query: 985 QL 986
L
Sbjct: 1134 YL 1135
Score = 95 (38.5 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 52/228 (22%), Positives = 99/228 (43%)
Query: 26 IELHNFMTFDHLIC---KPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGA 82
+E++ F +F + PG + V+GPNGSGKS++ AI LG + R +G
Sbjct: 6 LEMNGFKSFADKVAIDFVPG--MTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGRMGD 63
Query: 83 YVKRGEES----GYIKISLRGDTKEEHL-------TIMRKIDTRNKSEWFFNGKVVPKGE 131
+ G ++ + ++SL + ++ L + R+I SE+ N + +
Sbjct: 64 VIFAGSDTRKPINFAEVSLILENEDHFLPLDYSEVAVTRRIYRNGDSEFLINKENCRLKD 123
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
++++ + + + + Q ++ E P + E+A G L +H + +
Sbjct: 124 IVDLFMDSGLGRESFS-IISQGKIDEILNSKPEERRSIFEEAAG--VLKYKH-RKKQAEN 179
Query: 192 KLKTIECTVKRNGDTL----NQLKALNVEQEKDVERVRQRAELLEKVE 235
KL E + R D L QL+ L ++ + + Q+ EL EK E
Sbjct: 180 KLFETEENLNRVQDILYELEGQLEPLEMQASIAKDYLFQQEEL-EKYE 226
Score = 37 (18.1 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 15/53 (28%), Positives = 21/53 (39%)
Query: 646 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDD 698
TEQ I E + ++E + + K E + RK LE E DD
Sbjct: 449 TEQMEIYREVQQTLAKQEAVFGTQERALYKHYETVQQMKSRKETLE--ELADD 499
>TIGR_CMR|GSU_1130 [details] [associations]
symbol:GSU_1130 "chromosome segregation SMC protein,
putative" species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GenomeReviews:AE017180_GR GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 HOGENOM:HOG000036392 TIGRFAMs:TIGR02168 HSSP:Q9X0R4
EMBL:AJ543647 ProteinModelPortal:Q84EX7 PATRIC:22025022
ProtClustDB:CLSK924468 Uniprot:Q84EX7
Length = 1175
Score = 121 (47.7 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 76/373 (20%), Positives = 155/373 (41%)
Query: 645 QTEQRL-IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
+T++ L + + ++ + + + R++RE + +R ESI D+ +
Sbjct: 788 RTQEALTVSRRTIEAARDAVTALKVKGAQLREKREAASRATVRTE--ESIR---DLRERI 842
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMAS----IEFDAKIRELEFNL 759
+L + ++ A+ I ++ +YAE S EFDA++ +
Sbjct: 843 GRLRGEGESSAAEREHLAVAITAAEDDLKGHLAAYAEAETLSRSLRSEFDARVEAVRV-- 900
Query: 760 KQHEKLALQASLHY-EDCKKEVEHCRKHLSDAKRQAES-IAFITPELEKEFLE-MPTTI- 815
E+ L+ H E + EV + LS + I+ + + E E MP+
Sbjct: 901 ---EETGLRELRHQCEAARDEVAAHKLTLSGLTLELNHLISSLADKYRLEMREVMPSYAD 957
Query: 816 ----EELEAAIQDNISQA-NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 870
EE A Q + + + I +N ++EY + + LS++++ ++ L+
Sbjct: 958 RPFDEEAAARRQAELGRLIDEIGEVNLTAIEEYRELEERFAFLSSQKDDLEESLQSLQQA 1017
Query: 871 IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQS 929
I + +NE F F + G L +E D + GI I V+
Sbjct: 1018 IQRINRTTRKRFLETFTLVNEKFQEVFPRLFCGGRAELRLTNEEDLLETGIDIIVQ--PP 1075
Query: 930 GQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRA 989
G+ ++ + SGGE++++ + + S+ + PF ++DE++ +D N + F +VR
Sbjct: 1076 GK-KLQNVTLLSGGEKALTAVALIFSIFLIKPTPFCLLDEVDAPLDDANIGR-FNDMVRE 1133
Query: 990 ASQPNTPQCFLLT 1002
S + Q ++T
Sbjct: 1134 MS--DVSQFIIIT 1144
Score = 95 (38.5 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 56/210 (26%), Positives = 94/210 (44%)
Query: 48 VIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEES----GYIKISL-----R 98
++GPNG GKS++V AI A+G + R S+ + G E G ++S+
Sbjct: 29 IVGPNGCGKSNVVDAIRWAMGEQSAKNLRGRSMEDIIFGGSEFRKPLGMAEVSMVFATDD 88
Query: 99 GDTKEEHLT-----IMRKIDTRNKSEWFFNGKVVPKGEVLEITKRF-NIQVN-NLTQFLP 151
G ++L+ I R++ +SE+F N P +++IT+ F + V +
Sbjct: 89 GRVPAKYLSYSEIQITRRLYRDGESEYFLNK--TPC-RLMDITELFMDTGVGARAYSIIE 145
Query: 152 QDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECT---VKRNGDTLN 208
Q ++ P + E+A G + + K LK I+ T + R GD L+
Sbjct: 146 QGKIGMILHSKPEERRFIIEEAAGVTKFKAR------KQVALKKIDLTRQNLLRIGDILS 199
Query: 209 QLKA-LNV--EQEKDVERVRQRAELLEKVE 235
++K LN Q K ER R+ E L ++E
Sbjct: 200 EIKRQLNSLQRQVKKAERFREYREELREIE 229
Score = 44 (20.5 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 284 KKQEKAILDGDCKKLSSLINENSKRR 309
KK+E L G ++L S + E RR
Sbjct: 670 KKREIRELSGTVERLESAVRETETRR 695
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 20/89 (22%), Positives = 42/89 (47%)
Query: 371 IEKLGSQILELGVQANQKRLQKS--EKE-----KILNQNKLTLRQCSDRLKDMEDKNNKL 423
+E+L S + E + + R ++S E+E +IL+Q ++ L+ ++ ++
Sbjct: 681 VERLESAVRETETRREELRGERSRLEEEVRDLRQILHQTEIQFVNAEKDLQRAREECQRI 740
Query: 424 LHALRNSGAENIFEAYCWLQQHRHELNKE 452
+ +G E+ E LQ R L++E
Sbjct: 741 EERIAIAGIED--EQ---LQDERRTLDEE 764
>UNIPROTKB|Q15075 [details] [associations]
symbol:EEA1 "Early endosome antigen 1" species:9606 "Homo
sapiens" [GO:0005969 "serine-pyruvate aminotransferase complex"
evidence=IEA] [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0019897
"extrinsic to plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045022 "early endosome to late endosome transport"
evidence=NAS] [GO:0030742 "GTP-dependent protein binding"
evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=TAS] [GO:0005545
"1-phosphatidylinositol binding" evidence=IDA] [GO:0005516
"calmodulin binding" evidence=NAS] [GO:0016189 "synaptic vesicle to
endosome fusion" evidence=TAS] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0006906 "vesicle
fusion" evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0016020 "membrane" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00064
SMART:SM00355 GO:GO:0005829 GO:GO:0042803 GO:GO:0031901
GO:GO:0046872 GO:GO:0005545 GO:GO:0008270 GO:GO:0019897
GO:GO:0005516 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 eggNOG:NOG12793 GO:GO:0045022 GO:GO:0005769
GO:GO:0030742 GO:GO:0006906 EMBL:L40157 EMBL:X78998 EMBL:AC016136
EMBL:AC021646 EMBL:AC026111 IPI:IPI00329536 PIR:A57013
RefSeq:NP_003557.2 UniGene:Hs.567367 PDB:1HYI PDB:1HYJ PDB:1JOC
PDB:3MJH PDBsum:1HYI PDBsum:1HYJ PDBsum:1JOC PDBsum:3MJH
ProteinModelPortal:Q15075 SMR:Q15075 IntAct:Q15075
MINT:MINT-5004646 STRING:Q15075 PhosphoSite:Q15075 DMDM:229462866
PaxDb:Q15075 PRIDE:Q15075 DNASU:8411 Ensembl:ENST00000322349
GeneID:8411 KEGG:hsa:8411 UCSC:uc001tck.3 CTD:8411
GeneCards:GC12M093102 HGNC:HGNC:3185 HPA:CAB005861 HPA:CAB018782
HPA:HPA038158 HPA:HPA038159 MIM:605070 neXtProt:NX_Q15075
PharmGKB:PA27621 HOGENOM:HOG000112329 HOVERGEN:HBG039440
InParanoid:Q15075 KO:K12478 OMA:LKEQCKT OrthoDB:EOG4MSCXG
ChiTaRS:EEA1 EvolutionaryTrace:Q15075 GenomeRNAi:8411 NextBio:31490
PMAP-CutDB:Q15075 ArrayExpress:Q15075 Bgee:Q15075 CleanEx:HS_EEA1
Genevestigator:Q15075 GermOnline:ENSG00000102189 GO:GO:0005969
GO:GO:0016189 Uniprot:Q15075
Length = 1411
Score = 160 (61.4 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 169/885 (19%), Positives = 336/885 (37%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
K EES K +++ ++ L + + SE + V E E T++ +++
Sbjct: 324 KHNEES-VSKKNIQATLHQKDLDCQQLQSRLSASETSLHRIHVELSEKGEATQKLKEELS 382
Query: 145 NL-TQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRN 203
+ T++ Q EF +L + +E ++ H L+E +L +K
Sbjct: 383 EVETKY--QHLKAEFKQLQQQREEKEQHGLQLQSEINQLHSKLLETERQLGEAHGRLKEQ 440
Query: 204 GDTLNQLKALNVEQE-KDVERVRQRAE--LLEKVESMKKKLPWLKYDMKKAEYIXXXXXX 260
L+ K ++ EQ+ D++ R E L EKV + + L D K ++
Sbjct: 441 RQ-LSSEKLMDKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQL--DKTKQQHQEQQALQ 497
Query: 261 XXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDXXX 320
N L + + I K Q+ L+ +K I+ K R D K+
Sbjct: 498 QSTTAKLREAQNDLEQVLRQIGDKDQKIQNLEALLQKSKENISLLEKEREDLYAKIQAGE 557
Query: 321 XXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTV-PAYEPPHDKIEKLGSQIL 379
+ K + + + + + ++L
Sbjct: 558 GETAVLNQLQEKNHTLQEQVTQLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVL 617
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAY 439
L N+ Q +E ++ ++Q + ++ ++ L E L+N ++ A
Sbjct: 618 SLETSVNELNSQLNESKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQN----HLDTAQ 673
Query: 440 CWLQQHRHELNKEAYGPVLLEVNVSNRA-HANYLEDHVGHYIWKSFITQDAGDRDFLAKN 498
LQ + ELNK + + ++ H + LE H+ Y K +++ + + L
Sbjct: 674 NALQDKQQELNKITTQLDQVTAKLQDKQEHCSQLESHLKEYKEK-YLSLEQKTEE-LEGQ 731
Query: 499 LKPFDVPILNYVSNESSRKEPFQISEEMRALG--ISARLDQVFDAPHAVKEVLISQFGLD 556
+K + L ++S+++ Q ++ R L + R ++ KE+ +S LD
Sbjct: 732 IKKLEADSLEV---KASKEQALQDLQQQRQLNTDLELRATELSKQLEMEKEI-VSSTRLD 787
Query: 557 ----SSYIGS-KETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVEPVNQSRLL 611
S + S K+ K + K+ DF T + + +V + + ++
Sbjct: 788 LQKKSEALESIKQKLTKQEEEKKILKQDFETLSQETKIQHEELNNRIQTTVTELQKVKME 847
Query: 612 LCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIINIVQI 671
++ Q + I D K KE + + VQ+
Sbjct: 848 KEALMTELSTVKDKLSKVSDSLKNSKSEFEKENQKGKAAILD-LEKTCKELKHQLQ-VQM 905
Query: 672 EKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEI 731
E + + E +L K K S + + ++N+ +L+ QA + Q K +++ + E+
Sbjct: 906 ENTLKEQKELKKSLEKEKEASHQLKLELNSMQEQLI-QAQNTLKQNEKEEQQLQGNINEL 964
Query: 732 VSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAK 791
+K + +++ + KI L+ + KL Q + ++ E E ++ +
Sbjct: 965 KQSS-EQKKKQIEALQGELKIAVLQ-KTELENKLQQQLTQAAQELAAEKEKISVLQNNYE 1022
Query: 792 RQAESIAFITPEL---EKEFL----EMPTTIEELEAAIQDNISQANSIFFLNQN-ILQEY 843
+ E+ + + E E L ++ + E+L A +D IS N I NQN ++QE
Sbjct: 1023 KSQETFKQLQSDFYGRESELLATRQDLKSVEEKLSLAQEDLISNRNQIG--NQNKLIQEL 1080
Query: 844 EHRQRQIEDLSTKQEADKKELKRFLAEID---ALKEKWLPTLRNLVAQINETFSRNFQEM 900
+ + +E S K+E +E + L +I +LKEK L ++ +A+I E R +E+
Sbjct: 1081 KTAKATLEQDSAKKEQQLQERCKALQDIQKEKSLKEKELVNEKSKLAEIEEIKCRQEKEI 1140
Query: 901 AVAGEVSLDEHESDF--------DKFGILIKVKFRQSGQLEVLSA 937
E L H+ + D +LI+ K G+ + L A
Sbjct: 1141 TKLNE-ELKSHKLESIKEITNLKDAKQLLIQQKLELQGKADSLKA 1184
Score = 136 (52.9 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 61/257 (23%), Positives = 118/257 (45%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMEN-HINLRKRKLESIEKEDDINTA 702
+Q E+ L E E L E+ ++ I +I+ R+ +E+ + L+ KLESI++ ++ A
Sbjct: 1108 IQKEKSLKEKE---LVNEKSKLAEIEEIKCRQEKEITKLNEELKSHKLESIKEITNLKDA 1164
Query: 703 LAKLVDQAADLN--IQQFKYAIEIKNLLVEIVSCKWSYAEKHMAS--IEFDAK----IRE 754
L+ Q +L K A+E + +I+ + E+ + IE +AK I+E
Sbjct: 1165 KQLLIQQKLELQGKADSLKAAVEQEKRNQQILKDQVKKEEEELKKEFIEKEAKLHSEIKE 1224
Query: 755 LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT 814
E +K+HE+ + ++ ++ ++L K++ +S ELEK+ ++
Sbjct: 1225 KEVGMKKHEENEAKLTM-------QITALNENLGTVKKEWQSSQRRVSELEKQTDDLRGE 1277
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
I LEA +Q+N + ++ E E Q ++ +L K + ++ E +L
Sbjct: 1278 IAVLEATVQNNQDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQELGRENQSL 1337
Query: 875 KEKWLPTLRNLVAQINE 891
+ K L A+ NE
Sbjct: 1338 QIKHTQALNRKWAEDNE 1354
Score = 43 (20.2 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 273 TLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKV 316
T+ + + QE A+ + +KL S +NE +++ E +
Sbjct: 268 TISQLRSELAKGPQEVAVYVQELQKLKSSVNELTQKNQTLTENL 311
>UNIPROTKB|I3L5B3 [details] [associations]
symbol:LOC100621981 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016459 "myosin complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003774 "motor activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00650000092896
EMBL:FP085451 Ensembl:ENSSSCT00000025354 OMA:AMETELM Uniprot:I3L5B3
Length = 1358
Score = 129 (50.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 62/271 (22%), Positives = 124/271 (45%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-EDDINTAL 703
+ ++RL+ + +L+ E E+ + +++ME + + ++E+ K D++ L
Sbjct: 970 EEKKRLLIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQL 1029
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
KL Q D ++ +E + + + +EK + S+E A+I +L+ L E
Sbjct: 1030 RKLQAQMKD-----YQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSE 1082
Query: 764 KLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELE 819
+ A ++ E+ + + L D KR+ E+ IA + ELE+E + +E L
Sbjct: 1083 RARRHAEQERDELADEIANSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLN 1138
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKW 878
+ Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+
Sbjct: 1139 DRFRKTTLQVDT---LNAELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKF 1194
Query: 879 LPTLRNL---VAQINETFSRNFQEMAVAGEV 906
T+ L + Q+ E + +E A A ++
Sbjct: 1195 KATISALEAKIGQLEEQLEQEAKERAAANKL 1225
Score = 110 (43.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 51/216 (23%), Positives = 95/216 (43%)
Query: 654 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 711
++A L ++R I Q+E+ E N L R ++ + D +N LA + Q +
Sbjct: 1106 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNAELAAERSAAQKS 1165
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 770
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1166 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1223
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 830
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1224 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1279
Query: 831 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
+ + + +E + E LS + K L+R
Sbjct: 1280 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1312
Score = 104 (41.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 51/275 (18%), Positives = 123/275 (44%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAK 705
E+ L D+ K + ++ ++ + ++ +R++ +++ +++K + + +E +I+ A+
Sbjct: 792 EKALAYDKLEKTKNRLQQELDDLLVDLDHQRQIVSNLEKKQKKFDQLLAEEKNISARYAE 851
Query: 706 LVDQA-ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 764
D+A A+ ++ K A+ + L E + K + ++ + A + +L + K
Sbjct: 852 ERDRAEAEAREKETK-ALSLARALEEALEAKDEFERQNK---QLRADMEDLMSSKDDVGK 907
Query: 765 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE-ELEAAIQ 823
+ +++VE R L + + + ++ LE M E +L+ +
Sbjct: 908 NVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDE 967
Query: 824 DNISQANSIFFLNQNILQEYE--HRQRQIEDLSTKQ-EADKKELKRFLAEIDALKEKWLP 880
N + + + + E E +QR + S K+ E D K+L+ + + +++ +
Sbjct: 968 QNEEKKRLLIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIK 1027
Query: 881 TLRNLVAQINETFSRNFQEM-AVAGEVSLDEHESD 914
LR L AQ+ + + R +E A E+ ES+
Sbjct: 1028 QLRKLQAQMKD-YQRELEEARASRDEIFAQSKESE 1061
Score = 84 (34.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 43/172 (25%), Positives = 71/172 (41%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + + E LE KRF +
Sbjct: 550 KREQEVAELKKALEEETKNHEAQIQ---DMRQRHA----AALEELSEQLEQAKRFKANLE 602
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 603 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 660
Query: 202 RNG--DTLNQLKALNVEQEKD-VERVRQRAELLEKVESMKKKLPWLKYDMKK 250
N + L+ + L E EK ++ + A L +++ + K L+ + ++
Sbjct: 661 ANKLQNELDNVSTLLEEAEKKGIKFAKDAASLESQLQDTQNKQELLQEETRQ 712
Score = 58 (25.5 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN 429
KI+K+ +IL L Q N K + KEK L ++++ +CS +L + E+K K L +RN
Sbjct: 358 KIKKMEEEILLLEDQ-NSKFI----KEKKLMEDRIA--ECSSQLAEEEEKA-KNLAKIRN 409
Score = 55 (24.4 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 69/353 (19%), Positives = 127/353 (35%)
Query: 197 ECTVKRNGDTLNQLKALNVE---QEKDVERVRQR-AELLEKVESMKKKLPWLKYDMKKAE 252
E KR + KAL E E ++ +RQR A LE++ ++ K +++K +
Sbjct: 546 ELRTKREQEVAELKKALEEETKNHEAQIQDMRQRHAAALEELSEQLEQAKRFKANLEKNK 605
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDF 312
L + E K+++ LD ++L + ++E + R++
Sbjct: 606 Q-----GLETDNKELACEVKVLQQVKAESEHKRKK---LDAQVQELHAKVSEGDRLRVEL 657
Query: 313 LEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIE 372
EK + + + E K+
Sbjct: 658 AEKANKLQNELDNVSTLLEEAEKKGIKFAKDAASLESQLQDTQNKQELLQ--EETRQKLN 715
Query: 373 KLGSQILELGVQANQKRLQKSEKE---KILNQNKLTLR-QCSDRLKDMEDKNNKLLHALR 428
L S+I +L + N + Q+ E+E K L + L L+ Q +D K ++D + L
Sbjct: 716 -LSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQAQLTDTKKKVDDDVGTI-EGLE 773
Query: 429 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQD 488
+ + + +A L Q R E AY LE NR L+D + + I +
Sbjct: 774 EAKKKLLKDAEA-LSQ-RLEEKALAYDK--LE-KTKNRLQQE-LDDLLVDLDHQRQIVSN 827
Query: 489 AGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDA 541
+ L + I + E R E +E +AL ++ L++ +A
Sbjct: 828 LEKKQKKFDQLLAEEKNISARYAEERDRAEAEAREKETKALSLARALEEALEA 880
Score = 51 (23.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 75/362 (20%), Positives = 132/362 (36%)
Query: 112 IDTRNKSEWFFNGKVVP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEE 169
++T NK E KV+ K E K+ + QV L +V E +L V+L E+
Sbjct: 608 LETDNK-ELACEVKVLQQVKAESEHKRKKLDAQVQEL-----HAKVSEGDRLR-VELAEK 660
Query: 170 TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE 229
K + L+E++ K K I+ K +QL+ +QE E RQ+
Sbjct: 661 ANKLQNELD---NVSTLLEEAEK-KGIKFA-KDAASLESQLQDTQNKQELLQEETRQKLN 715
Query: 230 LLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXX--XXXXNTLHEFSKPIEGKKQE 287
L ++ ++++ L+ ++ E + + IEG ++
Sbjct: 716 LSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQAQLTDTKKKVDDDVGTIEGLEEA 775
Query: 288 KAILDGDCKKLSSLINENSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKA 347
K L D + LS + E + D LEK + + K
Sbjct: 776 KKKLLKDAEALSQRLEEKALA-YDKLEKTKNRLQQ---ELDDLLVDLDHQRQIVSNLEKK 831
Query: 348 RXXXXXXXXXXQTVPA-YEPPHDKIEKLGSQILELGVQANQKRLQKS--EKEKILNQNKL 404
+ + + A Y D+ E + E + + L+++ K++ QNK
Sbjct: 832 QKKFDQLLAEEKNISARYAEERDRAEAEARE-KETKALSLARALEEALEAKDEFERQNK- 889
Query: 405 TLRQCSDRLKDMEDKNNKLLHALRNSGA---ENIFEAYCWLQQHRHELNKEAYGPVLLEV 461
LR + L +D K +H L S + + E L++ EL + LEV
Sbjct: 890 QLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEV 949
Query: 462 NV 463
N+
Sbjct: 950 NM 951
Score = 47 (21.6 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 31/150 (20%), Positives = 69/150 (46%)
Query: 102 KEEHLTIMRKIDTR-----NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
K+E I+ +++R +++ N K + + ++ ++ + + Q L ++V
Sbjct: 296 KQELEEILHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVT 354
Query: 157 EFAKLSPVK----LLEE-TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
AK+ ++ LLE+ K + + +L A E SS+L E K N+ +
Sbjct: 355 AEAKIKKMEEEILLLEDQNSKFIKEKKLMEDRIA--ECSSQLAEEEEKAKNLAKIRNKQE 412
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + E ER+++ + +++E K+KL
Sbjct: 413 VMISDLE---ERLKKEEKTRQELEKAKRKL 439
Score = 41 (19.5 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 511 SNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEV 548
S + K+ +SEE+ AL L+ D A +E+
Sbjct: 512 SRNKAEKQKRDLSEELEAL--KTELEDTLDTTAAQQEL 547
>UNIPROTKB|O42184 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0044354 "macropinosome" evidence=IEA]
[GO:0051010 "microtubule plus-end binding" evidence=IEA]
InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
Pfam:PF01302 GO:GO:0005813 GO:GO:0046872 GO:GO:0006810
GO:GO:0008270 GO:GO:0003676 GO:GO:0030659 GO:GO:0001726
GO:GO:0044354 GO:GO:0001578 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 EMBL:AF014012 EMBL:AF020764
EMBL:AF045650 EMBL:AF045651 IPI:IPI00572978 IPI:IPI00576988
IPI:IPI00582575 IPI:IPI00603875 RefSeq:NP_990273.1 UniGene:Gga.3130
ProteinModelPortal:O42184 SMR:O42184 STRING:O42184 PRIDE:O42184
Ensembl:ENSGALT00000007110 Ensembl:ENSGALT00000007113 GeneID:395784
KEGG:gga:395784 CTD:6249 HOGENOM:HOG000092755 HOVERGEN:HBG007123
InParanoid:O42184 KO:K10421 OMA:SRTEGEA OrthoDB:EOG42Z4PQ
NextBio:20815852 Uniprot:O42184
Length = 1433
Score = 145 (56.1 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 76/323 (23%), Positives = 140/323 (43%)
Query: 653 DEAAKLQKEREEI------INIVQIEKRKRRE----MENHINLRKRKLESIEKEDDINT- 701
D +A+L K +E+ + +Q+E K E ++ ++ +K E ++E + T
Sbjct: 923 DSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQET-LKTH 981
Query: 702 --ALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFN 758
L K+ DQ D+ Q + K+L + KH A I+ F + + E
Sbjct: 982 QEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEA 1041
Query: 759 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
LK +K + E+ KK+ E + A+ +++ +T E + E T+ L
Sbjct: 1042 LKAAQKKNDELETQAEELKKQAEQAKAD-KRAEEVLQTMEKVTKEKDAIHQEKIETLASL 1100
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEH--RQRQIEDLSTKQ-EADKKELKRFLAEIDALK 875
E + Q N N + L QN L+ E + +++ +L K+ E KKE + L A K
Sbjct: 1101 ENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEA-LKLAAAQK 1159
Query: 876 EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL 935
+ L L+ ++ E R+ E V L+E S + L+++K R+S + +
Sbjct: 1160 SQQLAALQEENVKLAEELGRSRDE--VTSHQKLEEERSVLNNQ--LLEMKKRESTLKKEI 1215
Query: 936 SAHHQSGGERSVSTILYLVSLQD 958
S ++S+S L++ +D
Sbjct: 1216 DEERASL-QKSISDTSALITQKD 1237
Score = 113 (44.8 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 64/356 (17%), Positives = 158/356 (44%)
Query: 645 QTEQRLIEDEAAKL-QKEREEIINIVQIEKRKRR--EMENHINLRKRKLESI-EKEDDIN 700
+ QR +++ KL QKE + + ++E+ K ME + R+ + + + E + +
Sbjct: 852 ENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLE 911
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
+A+++ + D + Q K E++ ++ + + + +++ + + +
Sbjct: 912 NDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAE 971
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES----IAFITPELEKEFLEMPTTIE 816
Q ++ L+ H E+ KK + L+D K+Q E+ + + EKE EM T +
Sbjct: 972 QSQQETLKT--HQEELKK----MQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHD 1025
Query: 817 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE------LKRFLAE 870
+ N+ A Q E E + +++ + + +ADK+ +++ E
Sbjct: 1026 ADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKE 1085
Query: 871 IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSG 930
DA+ ++ + TL +L +T + E+ + + +L ++E + K L+ ++ ++
Sbjct: 1086 KDAIHQEKIETLASL-ENSRQTNEKLQNELDMLKQNNL-KNEEELTKSKELLNLENKKVE 1143
Query: 931 QLEV-LSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQ 985
+L+ A + ++S L +LQ+ N ++ +E+ + D + + ++
Sbjct: 1144 ELKKEFEALKLAAAQKSQQ----LAALQE-ENV--KLAEELGRSRDEVTSHQKLEE 1192
Score = 65 (27.9 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 373 KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNS 430
KL Q L +QA +K++Q E EK+ N K L+ +L D+E KN ++ +++S
Sbjct: 777 KLEIQKLSEQLQAAEKQIQNLETEKVSNLTK-ELQGKEQKLLDLE-KNLSAVNQVKDS 832
Score = 58 (25.5 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 370 KIEKLGSQILELGVQANQKRLQK--SEKEKILNQNKLTLRQCSDR-LKDMEDKNNKLLHA 426
K E SQ L+ ++A + +L + EKE+ L K L D+ L +MED NKL A
Sbjct: 670 KQENEKSQHLK-EIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEA 728
Query: 427 LRNSGAENIFEAYC 440
++ +A C
Sbjct: 729 EIKVKELDVLQAKC 742
Score = 50 (22.7 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 30/125 (24%), Positives = 57/125 (45%)
Query: 130 GEVLEITKRFNIQVNNLT--QFLPQDRVCEFAKLSPVKLLEETE--KAVGDPQLPVQHCA 185
G + E + R+ +++ T Q +++ +L + LE E KA Q A
Sbjct: 335 GLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELA 394
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
LV +E K ++QL+A+ VE R++ ELL ++E K+K+ L+
Sbjct: 395 LVRDGHDRHVLEMEAK-----MDQLRAM-VEAAD-----REKVELLNQLEEEKRKVEDLQ 443
Query: 246 YDMKK 250
+ +++
Sbjct: 444 FRVEE 448
Score = 50 (22.7 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 37/161 (22%), Positives = 65/161 (40%)
Query: 86 RGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNN 145
R EE K L TK EH I ++++ +S F K LE T+ + +
Sbjct: 445 RVEEESITKGDLETQTKLEHARI-KELE---QSLLFEKTKADKLQRELEDTRVATVSEKS 500
Query: 146 LTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGD 205
L +D +++ ++ E+ K + D + L E SS + + K +
Sbjct: 501 RIMELERDLALRVKEVAELRGRLESSKHIDDVDTSLS--LLQEISSLQEKMAAAGKEHQR 558
Query: 206 TLNQLKALNVEQE----KDVERVRQRAELLEKV-ESMKKKL 241
++ LK E K+++ + E + K ES+K KL
Sbjct: 559 EMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKL 599
Score = 48 (22.0 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 386 NQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA---LRNSGAE 433
NQK Q + L Q K L +LK+ E++ +L A L N AE
Sbjct: 866 NQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAE 916
Score = 47 (21.6 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 157 EFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE 216
E A S + +EE K + + Q E ++++ ++ + L +LK N +
Sbjct: 618 ESAIASHQQAMEEL-KVSFNKGVGAQTAEFAELKTQMEKVKLDYENEMSNL-KLKQENEK 675
Query: 217 QE--KDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ K++E ++ A+LLE E ++ L LK ++ E
Sbjct: 676 SQHLKEIEALK--AKLLEVTEEKEQTLENLKAKLESVE 711
Score = 47 (21.6 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 36/147 (24%), Positives = 66/147 (44%)
Query: 103 EEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLS 162
E+ L ++R R+ E K+ ++E R +++ L Q + R E +
Sbjct: 390 EQELALVRDGHDRHVLE--MEAKMDQLRAMVEAADREKVEL--LNQLEEEKRKVEDLQFR 445
Query: 163 PVKLLEETEKAVGD--PQLPVQHCALVEKSSKL---KTIECTVKRNGD-----TLNQLKA 212
+EE GD Q ++H + E L KT ++R + T+++ K+
Sbjct: 446 ----VEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSE-KS 500
Query: 213 LNVEQEKDVE-RVRQRAELLEKVESMK 238
+E E+D+ RV++ AEL ++ES K
Sbjct: 501 RIMELERDLALRVKEVAELRGRLESSK 527
Score = 46 (21.3 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 19/97 (19%), Positives = 43/97 (44%)
Query: 165 KLLEETEKAVG--DPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVE 222
+ ++ET + + Q + L + S L +E +K + QL V+ E D+
Sbjct: 856 RAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIA 915
Query: 223 RVRQR-----AELLEKVESMKKK---LPWLKYDMKKA 251
+ + A+L++ + ++ K L ++ ++ KA
Sbjct: 916 EIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKA 952
Score = 41 (19.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/103 (24%), Positives = 40/103 (38%)
Query: 425 HALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSF 484
+A + SG + EA QQH +L L E ++ RA HVG +
Sbjct: 344 YARKISGTTALQEALKEKQQHIEQL--------LAERDLE-RAEVAKATSHVGEIEQELA 394
Query: 485 ITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMR 527
+ +D DR L K + + ++ + Q+ EE R
Sbjct: 395 LVRDGHDRHVLEMEAKMDQLRAMVEAADREKVELLNQLEEEKR 437
>UNIPROTKB|F1MAD9 [details] [associations]
symbol:Smc4 "Structural maintenance of chromosomes protein"
species:10116 "Rattus norvegicus" [GO:0000796 "condensin complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:1306680 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 IPI:IPI00372213 RefSeq:NP_001032262.2 UniGene:Rn.163695
Ensembl:ENSRNOT00000013931 GeneID:295107 KEGG:rno:295107
NextBio:638993 Uniprot:F1MAD9
Length = 1286
Score = 122 (48.0 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 67/322 (20%), Positives = 143/322 (44%)
Query: 669 VQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNL 727
++ R ++ ++ + +++++ EKE +D+ T L + D A ++ I+ K A +
Sbjct: 925 IKTADRNLKKAQDSVCRTEKEIKDTEKEINDLKTELKNIEDNAEEV-IKNTKDA---EKS 980
Query: 728 LVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE---KLAL-QASLHYEDCKKEVEHC 783
L EI ++H A ++ I++ E L++ KL L Q H + ++++
Sbjct: 981 LPEI-------QKEHRALLQELKVIQDNEHALQKDALSIKLKLEQIDGHISEHNSKIKYW 1033
Query: 784 RKHLSDAK------RQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ 837
+K +S K E+++ ++ E + E ++ P +I A ++ + N
Sbjct: 1034 QKEISKIKLHPVEDNPVETVSVLSQE-DLEAIKSPDSITNQIALLEAQCREMKP----NL 1088
Query: 838 NILQEYEHRQRQIEDLSTKQEADK--KELKRFLAEIDALKEKWLPTLRNLVAQINETFSR 895
+ EY+ ++ L E DK E F + L+++ L I
Sbjct: 1089 GAIAEYKKKEELY--LQRVGELDKITSERDNFRQAYEDLRKQRLNEFMAGFYVITNKLKE 1146
Query: 896 NFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYL 953
N+Q + + G+ L+ +S D F GI+ V+ + ++ + SGGE+++S++ +
Sbjct: 1147 NYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKSWKKIFNL---SGGEKTLSSLALV 1202
Query: 954 VSLQDLTNCPFRVVDEINQGMD 975
+L P +DEI+ +D
Sbjct: 1203 FALHHYKPTPLYFMDEIDAALD 1224
Score = 109 (43.4 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 36/172 (20%), Positives = 82/172 (47%)
Query: 660 KEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQAADLNIQQF 718
KE E + +K++++ +E ++N+ K++ +++ EK + + +L D D+N ++
Sbjct: 838 KELEANVLTTAPDKKQQKLLEENVNVFKKEYDAVAEKAGKVEAEIKRLHDTIIDINNRKL 897
Query: 719 K-YAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 777
K ++ + ++ C + + +A I+ + NLK+ + + +D +
Sbjct: 898 KAQQNKLDTINKQLDECASAITKAQVA-------IKTADRNLKKAQDSVCRTEKEIKDTE 950
Query: 778 KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP----TTIEELEAAIQDN 825
KE+ + L + + AE + T + EK E+ ++EL+ IQDN
Sbjct: 951 KEINDLKTELKNIEDNAEEVIKNTKDAEKSLPEIQKEHRALLQELKV-IQDN 1001
Score = 97 (39.2 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 57/240 (23%), Positives = 104/240 (43%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 82 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 140
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E I+ I GD + + + R N S + +GK
Sbjct: 141 SVLIHNSDEHTDIQSCTVEVHFQKIIDKEGDDYDVLPNSNFYVSRTAYRDNTSVYHISGK 200
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P K E ++ + + + C
Sbjct: 201 KRTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP-KGQTEHDEGMLEYLEDIIGCG 259
Query: 186 LVEKSSKL--KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLE-KVESMKKK 240
+ + K+ + +E + G+ LN++K VE+EKD +E + A E L + E KKK
Sbjct: 260 RLNEPIKVLCRRVEILNEHRGEKLNRVKM--VEKEKDALEGEKNIAIEFLTLENEIFKKK 317
Score = 74 (31.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 35/155 (22%), Positives = 71/155 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL 161
K+ H+ D +N+ K + EIT++ N+ N + + E KL
Sbjct: 316 KKNHICQYYIYDLQNRIAEMKTQKEKIHEDTKEITEKSNVLSNEMKAKNSAVKDIE-KKL 374
Query: 162 SPV-KLLEETEKAVGDPQLPVQHCALVEK----SSKLKTIECTVKRNGDTLNQLKALNVE 216
+ V K +E+ ++ QL ++ + EK +SK K +E ++++ + + +LK++ +
Sbjct: 375 NKVTKFIEQNKEKF--TQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSIPAK 432
Query: 217 QEKDVERVRQRAELLEKV-ESMKKKLPWLKYDMKK 250
+ + R LEK E +KKL + +K+
Sbjct: 433 SKNVINETTTRNNSLEKEREKEEKKLKEVMDSLKQ 467
Score = 65 (27.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 40/174 (22%), Positives = 69/174 (39%)
Query: 152 QDRVCEFAKLSPVKLLEET----EKA-VGDPQLPVQHCALVEKSSKLKTIECTVKRNGDT 206
Q+R+ E K K+ E+T EK+ V ++ ++ A+ + KL + +++N +
Sbjct: 329 QNRIAEM-KTQKEKIHEDTKEITEKSNVLSNEMKAKNSAVKDIEKKLNKVTKFIEQNKEK 387
Query: 207 LNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXX 266
QL D+E V+ R +L KK L+ D +K E +
Sbjct: 388 FTQL---------DLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSIPAKSKNVIN 438
Query: 267 XXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMDFLEKVD 317
N E + E KK K ++D ++ L E K M F + V+
Sbjct: 439 ETTTRNNSLEKEREKEEKKL-KEVMDSLKQETQGLQKEKEIQEKELMGFNKSVN 491
Score = 40 (19.1 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 369 DKIEKLGSQILELGVQANQKRL--QKSEKEKILNQNKLTLRQCSDRLKDMEDKNN 421
++I K + I + + Q R+ K++KEKI K + + +M+ KN+
Sbjct: 311 NEIFKKKNHICQYYIYDLQNRIAEMKTQKEKIHEDTKEITEKSNVLSNEMKAKNS 365
>UNIPROTKB|F1NCD4 [details] [associations]
symbol:MYH9 "Myosin-9" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000146 "microfilament
motor activity" evidence=IEA] [GO:0000212 "meiotic spindle
organization" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0001768 "establishment of T cell polarity"
evidence=IEA] [GO:0001772 "immunological synapse" evidence=IEA]
[GO:0001931 "uropod" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005826
"actomyosin contractile ring" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005913 "cell-cell adherens junction"
evidence=IEA] [GO:0006509 "membrane protein ectodomain proteolysis"
evidence=IEA] [GO:0007132 "meiotic metaphase I" evidence=IEA]
[GO:0007520 "myoblast fusion" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0008305 "integrin complex"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0016460 "myosin
II complex" evidence=IEA] [GO:0030048 "actin filament-based
movement" evidence=IEA] [GO:0030220 "platelet formation"
evidence=IEA] [GO:0030224 "monocyte differentiation" evidence=IEA]
[GO:0030863 "cortical cytoskeleton" evidence=IEA] [GO:0030898
"actin-dependent ATPase activity" evidence=IEA] [GO:0031532 "actin
cytoskeleton reorganization" evidence=IEA] [GO:0031594
"neuromuscular junction" evidence=IEA] [GO:0032154 "cleavage
furrow" evidence=IEA] [GO:0032796 "uropod organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043495 "protein anchor" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0043534 "blood vessel
endothelial cell migration" evidence=IEA] [GO:0051295
"establishment of meiotic spindle localization" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
Pfam:PF00063 Pfam:PF00612 Pfam:PF01576 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 GO:GO:0005829 GO:GO:0005524
GO:GO:0005819 GO:GO:0008360 GO:GO:0030863 GO:GO:0015031
GO:GO:0031594 GO:GO:0043531 GO:GO:0005913 GO:GO:0000910
GO:GO:0031532 GO:GO:0000146 GO:GO:0001725 GO:GO:0001726
GO:GO:0016337 GO:GO:0005826 GO:GO:0006509 GO:GO:0043534
GO:GO:0008180 GO:GO:0032154 GO:GO:0030048 GO:GO:0051295
GO:GO:0001772 GO:GO:0001768 GO:GO:0007132 GO:GO:0032796
GO:GO:0001931 GO:GO:0000212 GO:GO:0008305 GO:GO:0016460
GO:GO:0030898 GeneTree:ENSGT00650000092896 IPI:IPI00572165
OMA:EMRQKHS EMBL:AADN02006228 EMBL:AADN02006229
Ensembl:ENSGALT00000020472 Uniprot:F1NCD4
Length = 1335
Score = 140 (54.3 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 59/231 (25%), Positives = 105/231 (45%)
Query: 646 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRK--RKLESIEKEDDINTAL 703
TE+ AKL+ + E +I +E+R RRE + L K RKLE D++ +
Sbjct: 384 TEEEEKSKSLAKLKNKHEAMIT--DLEERLRREEKQRQELEKTRRKLEG--DSSDLHDQI 439
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMA--SI-EFDAKIRELEFNLK 760
A+L Q A+L IQ K E++ L + A+K+MA I E +++I EL+ +L+
Sbjct: 440 AELQAQIAELKIQLSKKEEELQAALARVEE---EAAQKNMALKKIRELESQITELQEDLE 496
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
+A D +E+E + L D + + + E+E + T+E+ EA
Sbjct: 497 SERASRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQELRSKREQEVTVLKKTLED-EA 555
Query: 821 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 871
+ +Q + + ++E + Q + + E K+ L+ AE+
Sbjct: 556 KTHE--AQIQEMRQKHSQAIEELAEQLEQTKRVKANLEKAKQALESERAEL 604
Score = 119 (46.9 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 65/251 (25%), Positives = 122/251 (48%)
Query: 652 EDEAAKLQKEREEIINIVQIE-KRKRREMENHINLRKR-KLESIEKEDDINTALAKLVDQ 709
E++ +L ++ E+ V++E +RK+R + + RK+ +L+ + E I+TA K D+
Sbjct: 956 EEKRKQLIRQVREME--VELEDERKQRSIA--VAARKKLELDLKDLESHIDTA-NKNRDE 1010
Query: 710 AADLNIQQF-KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-HEKLAL 767
A I+Q K ++K+ + E+ + S E + E + K++ +E + Q E+LA
Sbjct: 1011 A----IKQLRKLQAQMKDYMRELEDTRTSREEILAQAKENEKKLKSMEAEMIQLQEELAA 1066
Query: 768 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE----LEKEFLEMPTTIEELEA--- 820
E K++ + R L+D + + E LE ++ +EE +
Sbjct: 1067 A-----ERAKRQAQQERDELADEIANSSGKGALAMEEKRRLEARIAQLEEELEEEQGNTE 1121
Query: 821 AIQDNISQAN-SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKW 878
I D + +AN I +N ++ E + Q+ E+ + E KELK L E++ A+K K+
Sbjct: 1122 IINDRLKKANLQIDQMNADLNAERSNAQKN-ENARQQMERQNKELKLKLQEMESAVKSKY 1180
Query: 879 LPTLRNLVAQI 889
T+ L A+I
Sbjct: 1181 KATITALEAKI 1191
Score = 92 (37.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 42/161 (26%), Positives = 81/161 (50%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEW--FFNGKVVPKGEVLEITKRFNIQ 142
+R E S +K+ L+G EH +K+D + + F G+ V K E+ E + ++
Sbjct: 600 ERAELSNEVKVLLQGKGDAEHKR--KKVDAQLQELQVKFTEGERV-KTELAERVNKLQVE 656
Query: 143 VNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLK-TIECTVK 201
++N+T L Q + KL+ K E + D Q L+++ ++LK + +K
Sbjct: 657 LDNVTGLLNQSD-SKSIKLA--KDFSALESQLQDTQ------ELLQEETRLKLSFSTKLK 707
Query: 202 RNGDTLNQLKALNVEQEKDVER-VRQRAELLEK--VESMKK 239
+ D N LK +E+E++ +R + ++ +L++ VE+ KK
Sbjct: 708 QTEDEKNALKE-QLEEEEEAKRNLEKQISVLQQQAVEARKK 747
Score = 90 (36.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 50/273 (18%), Positives = 120/273 (43%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQ 709
+E +LQ+E ++I ++ +R+ +++ +++K + + +E +I+ A+ D+
Sbjct: 786 LEKTKTRLQQELDDIA----VDLDHQRQTVSNLEKKQKKFDQLLAEEKNISAKYAEERDR 841
Query: 710 A-ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ 768
A A+ ++ K A+ + L E + K AE + +F ++ +L + K +
Sbjct: 842 AEAEAREKETK-ALSLARALEEAIEQK---AELERVNKQFRTEMEDLMSSKDDVGKSVHE 897
Query: 769 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE-ELEAAIQDNIS 827
+++VE + L + + + ++ LE M + +L + N
Sbjct: 898 LEKAKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNQQAMKAQFDRDLLGRDEQNEE 957
Query: 828 QANSIF--FLNQNILQEYEHRQRQIEDLSTKQ-EADKKELKRFLAEIDALKEKWLPTLRN 884
+ + + E E +QR I + K+ E D K+L+ + + +++ + LR
Sbjct: 958 KRKQLIRQVREMEVELEDERKQRSIAVAARKKLELDLKDLESHIDTANKNRDEAIKQLRK 1017
Query: 885 LVAQINETFSRNFQEMAVAGEVSLDEHESDFDK 917
L AQ+ + + R ++ + E L + + + K
Sbjct: 1018 LQAQMKD-YMRELEDTRTSREEILAQAKENEKK 1049
Score = 90 (36.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 63/316 (19%), Positives = 144/316 (45%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEK-RKRREMENHINLRKRKLESIEK-EDDINTALA 704
+++L E+E AK E++ I+++Q + R++M++ + + E+ +K + D+ +
Sbjct: 717 KEQLEEEEEAKRNLEKQ--ISVLQQQAVEARKKMDDGLGCLEIAEEAKKKLQKDLESLTQ 774
Query: 705 KLVDQAADLN-IQQFKYAI--EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 761
+ ++ A + +++ K + E+ ++ V++ + + + +FD + E E N+
Sbjct: 775 RYEEKIAAYDKLEKTKTRLQQELDDIAVDLDHQRQTVSNLEKKQKKFDQLLAE-EKNISA 833
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
K A + E +E E K LS A+ E+I ELE+ + T +E+L ++
Sbjct: 834 --KYAEERD-RAEAEAREKE--TKALSLARALEEAIEQ-KAELERVNKQFRTEMEDLMSS 887
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
D + + + + Q+ E + Q+E+L + +A + R A+K ++
Sbjct: 888 KDDVGKSVHELEKAKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNQQAMKAQFD-- 945
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQS 941
R+L+ + + + Q + E+ + E E + + I + + + L+ L +H +
Sbjct: 946 -RDLLGRDEQNEEKRKQLIRQVREMEV-ELEDERKQRSIAVAARKKLELDLKDLESHIDT 1003
Query: 942 GGERSVSTILYLVSLQ 957
+ I L LQ
Sbjct: 1004 ANKNRDEAIKQLRKLQ 1019
Score = 89 (36.4 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 46/217 (21%), Positives = 97/217 (44%)
Query: 655 AAKLQKEREEIINIVQIEKRKRREMENH--IN--LRKRKLESIEKEDDINTALAKLVDQA 710
A ++++R I Q+E+ E N IN L+K L+ + D+N A+ +
Sbjct: 1093 ALAMEEKRRLEARIAQLEEELEEEQGNTEIINDRLKKANLQIDQMNADLN---AERSNAQ 1149
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQA 769
+ N +Q + + K L +++ + + K+ A+I +AKI +LE L K A
Sbjct: 1150 KNENARQ-QMERQNKELKLKLQEMESAVKSKYKATITALEAKIVQLEEQLDMETKERQAA 1208
Query: 770 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 829
S +K+++ + D +R AE + +K + + +LE A ++ +A
Sbjct: 1209 SKQVRRAEKKLKDILLQVDDERRNAEQFK---DQADKANMRLKQLKRQLEEA-EEEAQRA 1264
Query: 830 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
N+ + + +E + + ++ + + K +L+R
Sbjct: 1265 NAS---RRKLQRELDDATETADAMNREVSSLKSKLRR 1298
Score = 87 (35.7 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 56/240 (23%), Positives = 106/240 (44%)
Query: 654 EAAKLQKEREEIINIV-QIEKRKRREMENHINLRKRKLESIEKEDDIN-TALAKL---VD 708
E L ++++ V ++EK KR +E + K +LE E ED++ T AKL V+
Sbjct: 880 EMEDLMSSKDDVGKSVHELEKAKRA-LEQQVEEMKTQLE--ELEDELQATEDAKLRLEVN 936
Query: 709 QAA-------DLNIQQFKYAIEIKNLLVEIVSCKWSYA-EKHMASIEFDAKIRELEFNLK 760
Q A DL + + + K L+ ++ + E+ SI A+ ++LE +LK
Sbjct: 937 QQAMKAQFDRDLLGRDEQNEEKRKQLIRQVREMEVELEDERKQRSIAVAAR-KKLELDLK 995
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
E A+ + ++ K++ + + D R+ E E+ + E ++ +EA
Sbjct: 996 DLESHIDTANKNRDEAIKQLRKLQAQMKDYMRELEDTRTSREEILAQAKENEKKLKSMEA 1055
Query: 821 A---IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+Q+ ++ A + QE + +I + S K +E +R A I L+E+
Sbjct: 1056 EMIQLQEELAAAERA---KRQAQQERDELADEIANSSGKGALAMEEKRRLEARIAQLEEE 1112
Score = 48 (22.0 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 377 QILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
Q LE ++ + QK + EK+ + KL ++ + + +ED+N KL
Sbjct: 321 QELEEQLEEEESARQKLQLEKVTTEAKL--KKLEEDVIVLEDQNLKL 365
Score = 47 (21.6 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 17/70 (24%), Positives = 34/70 (48%)
Query: 365 EPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN-NKL 423
E +K ++L Q+ E+ V+ +R Q+S + +L L+ + D +KN ++
Sbjct: 953 EQNEEKRKQLIRQVREMEVELEDERKQRSIAVAARKKLELDLKDLESHI-DTANKNRDEA 1011
Query: 424 LHALRNSGAE 433
+ LR A+
Sbjct: 1012 IKQLRKLQAQ 1021
Score = 45 (20.9 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 380 ELGVQA--NQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
E+ QA N+K+L+ E E I Q +L + + R E ++L + NS +
Sbjct: 1038 EILAQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQE--RDELADEIANSSGK 1091
Score = 40 (19.1 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 13/64 (20%), Positives = 32/64 (50%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKA-LNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
E+ K+K + + + +A L E+ + E+++ AEL + E ++ +L K
Sbjct: 227 EELIKVKEKQLAAENRLSEMETFQAQLMAEKMQLQEQLQAEAELCAEAEEIRARLTAKKQ 286
Query: 247 DMKK 250
++++
Sbjct: 287 ELEE 290
>ASPGD|ASPL0000017987 [details] [associations]
symbol:sldI species:162425 "Emericella nidulans"
[GO:0000077 "DNA damage checkpoint" evidence=IMP] [GO:0009411
"response to UV" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0000722 "telomere maintenance via
recombination" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0000734 "gene conversion at mating-type locus,
DNA repair synthesis" evidence=IEA] [GO:0032078 "negative
regulation of endodeoxyribonuclease activity" evidence=IEA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0003691 "double-stranded telomeric DNA binding" evidence=IEA]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IEA]
[GO:0051880 "G-quadruplex DNA binding" evidence=IEA] [GO:0004017
"adenylate kinase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0030870 "Mre11 complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR004584 GO:GO:0005524 GO:GO:0006281 EMBL:BN001302
EMBL:AACD01000061 eggNOG:COG0419 GO:GO:0030870 KO:K10866
PANTHER:PTHR18867 TIGRFAMs:TIGR00606 OMA:NELGTHR
HOGENOM:HOG000192269 OrthoDB:EOG4C2MJW RefSeq:XP_661223.1
ProteinModelPortal:Q5B761 STRING:Q5B761
EnsemblFungi:CADANIAT00005121 GeneID:2873042 KEGG:ani:AN3619.2
Uniprot:Q5B761
Length = 1319
Score = 113 (44.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 61/245 (24%), Positives = 113/245 (46%)
Query: 647 EQRLIEDEAAK-LQKE-REEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
+Q + D A + Q E RE ++ QI +RK E+ N KR++ + +KE A
Sbjct: 419 DQTQVLDRAKREAQGELREAQTSLNQISERKSVLQESK-NAAKRQIAANDKE--AAGYQA 475
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ--H 762
KL +AD Q A+E N E + + A++ S D +I ++ +++
Sbjct: 476 KLDSISADEGAQA---ALE-SN--AEDIHSRLDQAKERERSASRDKQIEDINSQIRELED 529
Query: 763 EKLALQASLHYEDCKK-----EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
E L A L E KK ++H +K L D +R E++ E +F+ I+
Sbjct: 530 ENSRLNAEL-IEATKKAGDLARLDHLKKELKDRERSLETMKSAHGERLSKFVNPNWKIDT 588
Query: 818 LEAAIQDNIS-QANSIFFLNQ---NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-D 872
LE Q + ++N++ + ++ +E E + +++D+ +KELK + EI +
Sbjct: 589 LEQDFQRTLEDKSNAVIMAERAKDSLSRELEQVEYKLKDVEKSLTQRQKELKECVEEIRE 648
Query: 873 ALKEK 877
A+ ++
Sbjct: 649 AIDDE 653
Score = 98 (39.6 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 56/229 (24%), Positives = 104/229 (45%)
Query: 45 LNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKR----GEES--GYIKISLR 98
L L++G NGSGK++++ + A GD L + GA++ GE+ +K+S +
Sbjct: 46 LTLIVGYNGSGKTTIIECLKYATTGD---LPPNSKGGAFIHDPKLCGEKEVLAQVKLSFK 102
Query: 99 GD-------TKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLP 151
G T+ LT+ K TR + ++ +GE I+ R V L Q +P
Sbjct: 103 GTSGAKMVATRSLQLTV--KKTTRQQKTLEGQLLMIKEGERTAISSR----VAELDQIMP 156
Query: 152 QDRVCEFAKLSPVKLLEETEKA--VGDPQ-LPVQHCALVE--KSSK-LKTIECTVKRNGD 205
Q A L V + E + +P L + + E K +K + I+ K+ +
Sbjct: 157 QYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAVKYTKAIDNIKALRKKQNE 216
Query: 206 TLNQLKALNVEQEKDVE---RVRQRAELL-EKVESMKKKLPWLKYDMKK 250
L + K + ++D E R +R+ +L E++E+++ + L +M++
Sbjct: 217 ELGKYKIIEQHAKEDKEKADRAEKRSIMLQEEIETLRVETQQLTQEMRR 265
Score = 81 (33.6 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 74/314 (23%), Positives = 138/314 (43%)
Query: 646 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKL-ESIEKEDDINTALA 704
T +RL E E +LQ+E E+ +E R E+ + R + + E +EK+ DI AL+
Sbjct: 753 TWKRLKETEIPELQQEDEKYT----LE---RDELLGQLEDRDKAVSEMVEKKRDIE-ALS 804
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEI--VSCKWSYAEKHMASIE-FDAKIRELEFNLKQ 761
K V +Y +IK+ +I +S K ++E +I + +
Sbjct: 805 KTVSTIV-------RYDSDIKSTRAQIQDLSSKQQQNTAAPRTLEDIQDEIASIGEKTRA 857
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE---L 818
+K + + E + E+ L D K +++ F +LE++ ++ + IEE L
Sbjct: 858 LKKTLSKLTNEREHARAEINSLELQLRDVKSNLDNVKF---QLERK-ADLLSRIEEYKTL 913
Query: 819 EAAIQDNISQAN-SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLA-------- 869
++ I++A+ I LN +L+ Y Q +D+S + EA ++EL++ ++
Sbjct: 914 NNQQREAIAKADRDIEDLNPELLK-Y---QAIYDDISQRAEARERELQQIISQLSDSIHQ 969
Query: 870 ------EIDALKEKWLP-----TLRNLVAQINETFSRNFQEMAVA---GEVSLDEHESDF 915
EIDA E+ P + R L + NE ++ A+ ++S +S+
Sbjct: 970 VELASEEIDAYNERGGPHQLDRSKRELKSIENEISQLETEQAALTRTINKISTQLKDSEN 1029
Query: 916 DKFGILIKVKFRQS 929
K + +RQS
Sbjct: 1030 TKRQYADNLTYRQS 1043
Score = 81 (33.6 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 55/229 (24%), Positives = 102/229 (44%)
Query: 653 DEAAK--LQKEREEIIN-IVQIEKRKR-----REMENHINLRKRKLESIEKEDDINTALA 704
DE A+ L+ E+I + + Q ++R+R +++E+ IN + R+LE ++ +N L
Sbjct: 483 DEGAQAALESNAEDIHSRLDQAKERERSASRDKQIED-INSQIRELE--DENSRLNAELI 539
Query: 705 KLVDQAADL-NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE--FN--L 759
+ +A DL + K E+K+ + + K ++ E+ + + KI LE F L
Sbjct: 540 EATKKAGDLARLDHLKK--ELKDRERSLETMKSAHGERLSKFVNPNWKIDTLEQDFQRTL 597
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
+ + A + +E+E L D ++ +T + +KE E +EE+
Sbjct: 598 EDKSNAVIMAERAKDSLSRELEQVEYKLKDVEKS------LT-QRQKELKEC---VEEIR 647
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQ---IEDLSTKQEADKKELK 865
AI D + + QN L + Q IE+ ++ A KE K
Sbjct: 648 EAIDDEPEEYPDVVSQRQNQLDMAKSTAEQGAGIEEYMSRCLATAKEDK 696
Score = 56 (24.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 17/63 (26%), Positives = 35/63 (55%)
Query: 364 YEPPHDKIEK-LGSQI-LELGVQANQKRL-QKSEKEKILNQNKLTLRQCSDRLKDMEDKN 420
Y+ D I G+Q LE + RL Q E+E+ +++K + + +++++ED+N
Sbjct: 473 YQAKLDSISADEGAQAALESNAEDIHSRLDQAKERERSASRDK-QIEDINSQIRELEDEN 531
Query: 421 NKL 423
++L
Sbjct: 532 SRL 534
>MGI|MGI:1930780 [details] [associations]
symbol:Myh10 "myosin, heavy polypeptide 10, non-muscle"
species:10090 "Mus musculus" [GO:0000146 "microfilament motor
activity" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000281 "cytokinesis after mitosis"
evidence=ISO;IMP] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001725 "stress fiber" evidence=ISO;IDA;IMP]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0001778 "plasma
membrane repair" evidence=IMP] [GO:0003774 "motor activity"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005819 "spindle" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005938 "cell
cortex" evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006887 "exocytosis" evidence=IMP] [GO:0006930
"substrate-dependent cell migration, cell extension" evidence=IMP]
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0007512 "adult heart development" evidence=IMP] [GO:0008152
"metabolic process" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0008360 "regulation of cell shape" evidence=IMP]
[GO:0016459 "myosin complex" evidence=IDA] [GO:0016460 "myosin II
complex" evidence=IDA] [GO:0021592 "fourth ventricle development"
evidence=IMP] [GO:0021670 "lateral ventricle development"
evidence=IMP] [GO:0021678 "third ventricle development"
evidence=IMP] [GO:0021680 "cerebellar Purkinje cell layer
development" evidence=IMP] [GO:0030036 "actin cytoskeleton
organization" evidence=IGI] [GO:0030048 "actin filament-based
movement" evidence=ISO] [GO:0030239 "myofibril assembly"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth
cone" evidence=IDA] [GO:0030496 "midbody" evidence=ISO] [GO:0030898
"actin-dependent ATPase activity" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=IMP] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0032154 "cleavage furrow" evidence=ISO]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0043025 "neuronal
cell body" evidence=IDA] [GO:0043197 "dendritic spine"
evidence=IDA] [GO:0043531 "ADP binding" evidence=ISO] [GO:0050885
"neuromuscular process controlling balance" evidence=IMP]
[GO:0051015 "actin filament binding" evidence=ISO] [GO:0055003
"cardiac myofibril assembly" evidence=IMP] [GO:0055015 "ventricular
cardiac muscle cell development" evidence=IMP] [GO:0060041 "retina
development in camera-type eye" evidence=IMP] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 MGI:MGI:1930780 GO:GO:0005829 GO:GO:0005524
GO:GO:0005938 GO:GO:0007411 GO:GO:0001764 GO:GO:0008360
GO:GO:0008283 GO:GO:0030424 GO:GO:0043025 GO:GO:0001701
GO:GO:0043197 GO:GO:0050885 GO:GO:0043531 GO:GO:0030426
Reactome:REACT_127416 GO:GO:0060041 GO:GO:0000281 GO:GO:0000146
GO:GO:0001725 GO:GO:0055003 GO:GO:0006887 GO:GO:0007512
GO:GO:0030496 GO:GO:0032154 GO:GO:0030048 GO:GO:0021670
EMBL:AL603662 GO:GO:0007097 eggNOG:COG5022 GO:GO:0055015
GO:GO:0021680 GO:GO:0001778 EMBL:AL645644 GO:GO:0006930
GO:GO:0021678 GO:GO:0021592 GO:GO:0016460 GO:GO:0030898 CTD:4628
GeneTree:ENSGT00650000092896 HOGENOM:HOG000173958
HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1 SUPFAM:SSF50084
EMBL:BC089011 EMBL:AH003264 IPI:IPI00515398 RefSeq:NP_780469.1
UniGene:Mm.218233 ProteinModelPortal:Q61879 SMR:Q61879
DIP:DIP-31956N IntAct:Q61879 STRING:Q61879 PhosphoSite:Q61879
PaxDb:Q61879 PRIDE:Q61879 Ensembl:ENSMUST00000102611 GeneID:77579
KEGG:mmu:77579 InParanoid:Q61879 NextBio:347140 Bgee:Q61879
CleanEx:MM_MYH10 Genevestigator:Q61879
GermOnline:ENSMUSG00000020900 Uniprot:Q61879
Length = 1976
Score = 137 (53.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 111/553 (20%), Positives = 221/553 (39%)
Query: 379 LELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNS--GAENIF 436
LE +Q Q+ LQ+ ++K LN S R++ +E++ N L +N+
Sbjct: 1313 LESQLQDTQELLQEETRQK-LN--------LSSRIRQLEEEKNSLQEQQEEEEEARKNLE 1363
Query: 437 EAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLED--HVGHYIWKSFITQDAGDR-- 492
+ LQ + K+ L + A L+D + + + + D ++
Sbjct: 1364 KQVLALQSQLADTKKKVDDD-LGTIESLEEAKKKLLKDVEALSQRLEEKVLAYDKLEKTK 1422
Query: 493 DFLAKNLKPFDVPI---LNYVSNESSRKEPF-QISEEMRALGISARLDQVFDAPHA-VKE 547
+ L + L V + VSN +++ F Q+ E + GISAR + D A +E
Sbjct: 1423 NRLQQELDDLTVDLDHQRQIVSNLEKKQKKFDQLLAEEK--GISARYAEERDRAEAEARE 1480
Query: 548 VLISQFGLDSSY---IGSKETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVEP 604
L + + +KE ++ + + + D + ++ ++ A +
Sbjct: 1481 KETKALSLARALEEALEAKEEFERQNKQLRADMEDLMSSKDDVGKNVHELEKSKRALEQQ 1540
Query: 605 VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREE 664
V + R L ++ +QT E++ L K+ E
Sbjct: 1541 VEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLLLKQVRE 1600
Query: 665 IINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIE 723
+ ++ E+++R + L+ +E + + N A +++ Q L Q Y E
Sbjct: 1601 LEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKLQAQMKDYQRE 1660
Query: 724 IKNLLV--EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVE 781
++ + + + +EK + S+E A+I +L+ L E+ A ++ E+
Sbjct: 1661 LEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSERARRHAEQERDELADEIA 1718
Query: 782 HC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ 837
+ + L D KR+ E+ IA + ELE+E + +E L + Q ++ LN
Sbjct: 1719 NSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLNDRFRKTTLQVDT---LNT 1771
Query: 838 NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKWLPTLRNL---VAQINETF 893
+ E Q+ ++ + E KELK L E++ A+K K+ T+ L + Q+ E
Sbjct: 1772 ELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQL 1830
Query: 894 SRNFQEMAVAGEV 906
+ +E A A ++
Sbjct: 1831 EQEAKERAAANKL 1843
Score = 115 (45.5 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 52/216 (24%), Positives = 96/216 (44%)
Query: 654 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 711
++A L ++R I Q+E+ E N L R ++ + D +NT LA + Q +
Sbjct: 1724 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNTELAAERSAAQKS 1783
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 770
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1784 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1841
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 830
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1842 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1897
Query: 831 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
+ + + +E + E LS + K L+R
Sbjct: 1898 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1930
Score = 77 (32.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 42/163 (25%), Positives = 66/163 (40%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + E LE KRF +
Sbjct: 1171 KREQEVAELKKALEDETKNHEAQIQ---DMRQRHATALE----ELSEQLEQAKRFKANLE 1223
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1224 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1281
Query: 202 RNG--DTLNQLKALNVEQEKD-VERVRQRAELLEKVESMKKKL 241
N + L+ + L E EK ++ + A L +++ ++ L
Sbjct: 1282 ANKLQNELDNVSTLLEEAEKKGIKFAKDAAGLESQLQDTQELL 1324
Score = 57 (25.1 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN 429
KI+K+ ++L L Q N K + KEK L ++++ +CS +L + E+K K L +RN
Sbjct: 979 KIKKMEEEVLLLEDQ-NSKFI----KEKKLMEDRIA--ECSSQLAEEEEKA-KNLAKIRN 1030
Score = 56 (24.8 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 46/230 (20%), Positives = 85/230 (36%)
Query: 197 ECTVKRNGDTLNQLKALNVE---QEKDVERVRQR-AELLEKVESMKKKLPWLKYDMKKAE 252
E KR + KAL E E ++ +RQR A LE++ ++ K +++K +
Sbjct: 1167 ELRTKREQEVAELKKALEDETKNHEAQIQDMRQRHATALEELSEQLEQAKRFKANLEKNK 1226
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDF 312
L + E K+++ LD ++L + ++E + R++
Sbjct: 1227 Q-----GLETDNKELACEVKVLQQVKAESEHKRKK---LDAQVQELHAKVSEGDRLRVEL 1278
Query: 313 LEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIE 372
EK + + K Q + E K+
Sbjct: 1279 AEKANKLQN----ELDNVSTLLEEAEKKGIKFAKDAAGLESQLQDTQEL-LQEETRQKLN 1333
Query: 373 KLGSQILELGVQANQKRLQKSEKE---KILNQNKLTLR-QCSDRLKDMED 418
L S+I +L + N + Q+ E+E K L + L L+ Q +D K ++D
Sbjct: 1334 -LSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQSQLADTKKKVDD 1382
Score = 47 (21.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 370 KIEKL-GSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
K +KL +I E Q ++ + KI N+ ++ + +RLK E +L A R
Sbjct: 999 KEKKLMEDRIAECSSQLAEEEEKAKNLAKIRNKQEVMISDLEERLKKEEKTRQELEKAKR 1058
Query: 429 NSGAE 433
E
Sbjct: 1059 KLDGE 1063
Score = 47 (21.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 27/151 (17%), Positives = 60/151 (39%)
Query: 274 LHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLE----KVDXXXXXXXXKYKX 329
LH+ +E +++ IL + KK+ + I ++ + ++D E K+ K K
Sbjct: 924 LHDLESRVEEEEERNQILQNEKKKMQAHI-QDLEEQLDEEEGARQKLQLEKVTAEAKIKK 982
Query: 330 XXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK-IEKLGSQILELGVQANQK 388
+K + + A E K + K+ ++ E+ + ++
Sbjct: 983 MEEEVLLLEDQNSKFIKEKKLMEDRIAECSSQLAEEEEKAKNLAKIRNK-QEVMISDLEE 1041
Query: 389 RLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 419
RL+K EK + + + R+ D++D+
Sbjct: 1042 RLKKEEKTR--QELEKAKRKLDGETTDLQDQ 1070
>UNIPROTKB|F1SSA6 [details] [associations]
symbol:LOC396903 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016459 "myosin complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003774 "motor activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
GeneTree:ENSGT00650000092896 OMA:DKNVHEL EMBL:CU672254
Ensembl:ENSSSCT00000019573 ArrayExpress:F1SSA6 Uniprot:F1SSA6
Length = 1864
Score = 129 (50.5 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 62/271 (22%), Positives = 124/271 (45%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-EDDINTAL 703
+ ++RL+ + +L+ E E+ + +++ME + + ++E+ K D++ L
Sbjct: 1476 EEKKRLLIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQL 1535
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
KL Q D ++ +E + + + +EK + S+E A+I +L+ L E
Sbjct: 1536 RKLQAQMKD-----YQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSE 1588
Query: 764 KLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELE 819
+ A ++ E+ + + L D KR+ E+ IA + ELE+E + +E L
Sbjct: 1589 RARRHAEQERDELADEIANSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLN 1644
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKW 878
+ Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+
Sbjct: 1645 DRFRKTTLQVDT---LNAELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKF 1700
Query: 879 LPTLRNL---VAQINETFSRNFQEMAVAGEV 906
T+ L + Q+ E + +E A A ++
Sbjct: 1701 KATISALEAKIGQLEEQLEQEAKERAAANKL 1731
Score = 110 (43.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 51/216 (23%), Positives = 95/216 (43%)
Query: 654 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 711
++A L ++R I Q+E+ E N L R ++ + D +N LA + Q +
Sbjct: 1612 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNAELAAERSAAQKS 1671
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 770
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1672 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1729
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 830
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1730 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1785
Query: 831 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
+ + + +E + E LS + K L+R
Sbjct: 1786 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1818
Score = 104 (41.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 51/275 (18%), Positives = 123/275 (44%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAK 705
E+ L D+ K + ++ ++ + ++ +R++ +++ +++K + + +E +I+ A+
Sbjct: 1298 EKALAYDKLEKTKNRLQQELDDLLVDLDHQRQIVSNLEKKQKKFDQLLAEEKNISARYAE 1357
Query: 706 LVDQA-ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 764
D+A A+ ++ K A+ + L E + K + ++ + A + +L + K
Sbjct: 1358 ERDRAEAEAREKETK-ALSLARALEEALEAKDEFERQNK---QLRADMEDLMSSKDDVGK 1413
Query: 765 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE-ELEAAIQ 823
+ +++VE R L + + + ++ LE M E +L+ +
Sbjct: 1414 NVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDE 1473
Query: 824 DNISQANSIFFLNQNILQEYE--HRQRQIEDLSTKQ-EADKKELKRFLAEIDALKEKWLP 880
N + + + + E E +QR + S K+ E D K+L+ + + +++ +
Sbjct: 1474 QNEEKKRLLIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIK 1533
Query: 881 TLRNLVAQINETFSRNFQEM-AVAGEVSLDEHESD 914
LR L AQ+ + + R +E A E+ ES+
Sbjct: 1534 QLRKLQAQMKD-YQRELEEARASRDEIFAQSKESE 1567
Score = 84 (34.6 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 43/172 (25%), Positives = 71/172 (41%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + + E LE KRF +
Sbjct: 1056 KREQEVAELKKALEEETKNHEAQIQ---DMRQRHA----AALEELSEQLEQAKRFKANLE 1108
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1109 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1166
Query: 202 RNG--DTLNQLKALNVEQEKD-VERVRQRAELLEKVESMKKKLPWLKYDMKK 250
N + L+ + L E EK ++ + A L +++ + K L+ + ++
Sbjct: 1167 ANKLQNELDNVSTLLEEAEKKGIKFAKDAASLESQLQDTQNKQELLQEETRQ 1218
Score = 55 (24.4 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 69/353 (19%), Positives = 127/353 (35%)
Query: 197 ECTVKRNGDTLNQLKALNVE---QEKDVERVRQR-AELLEKVESMKKKLPWLKYDMKKAE 252
E KR + KAL E E ++ +RQR A LE++ ++ K +++K +
Sbjct: 1052 ELRTKREQEVAELKKALEEETKNHEAQIQDMRQRHAAALEELSEQLEQAKRFKANLEKNK 1111
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDF 312
L + E K+++ LD ++L + ++E + R++
Sbjct: 1112 Q-----GLETDNKELACEVKVLQQVKAESEHKRKK---LDAQVQELHAKVSEGDRLRVEL 1163
Query: 313 LEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIE 372
EK + + + E K+
Sbjct: 1164 AEKANKLQNELDNVSTLLEEAEKKGIKFAKDAASLESQLQDTQNKQELLQ--EETRQKLN 1221
Query: 373 KLGSQILELGVQANQKRLQKSEKE---KILNQNKLTLR-QCSDRLKDMEDKNNKLLHALR 428
L S+I +L + N + Q+ E+E K L + L L+ Q +D K ++D + L
Sbjct: 1222 -LSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQAQLTDTKKKVDDDVGTI-EGLE 1279
Query: 429 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQD 488
+ + + +A L Q R E AY LE NR L+D + + I +
Sbjct: 1280 EAKKKLLKDAEA-LSQ-RLEEKALAYDK--LE-KTKNRLQQE-LDDLLVDLDHQRQIVSN 1333
Query: 489 AGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDA 541
+ L + I + E R E +E +AL ++ L++ +A
Sbjct: 1334 LEKKQKKFDQLLAEEKNISARYAEERDRAEAEAREKETKALSLARALEEALEA 1386
Score = 47 (21.6 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 31/150 (20%), Positives = 69/150 (46%)
Query: 102 KEEHLTIMRKIDTR-----NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
K+E I+ +++R +++ N K + + ++ ++ + + Q L ++V
Sbjct: 802 KQELEEILHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVT 860
Query: 157 EFAKLSPVK----LLEE-TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
AK+ ++ LLE+ K + + +L A E SS+L E K N+ +
Sbjct: 861 AEAKIKKMEEEILLLEDQNSKFIKEKKLMEDRIA--ECSSQLAEEEEKAKNLAKIRNKQE 918
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + E ER+++ + +++E K+KL
Sbjct: 919 VMISDLE---ERLKKEEKTRQELEKAKRKL 945
>UNIPROTKB|Q10970 [details] [associations]
symbol:smc "Chromosome partition protein Smc" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 GO:GO:0005694 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 EMBL:BX842581 GO:GO:0030261
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K03529
TIGRFAMs:TIGR02168 EMBL:AJ414609 PIR:B70748 RefSeq:NP_217438.2
RefSeq:NP_337503.1 RefSeq:YP_006516375.1 ProteinModelPortal:Q10970
SMR:Q10970 PhosSite:P12071629 PRIDE:Q10970
EnsemblBacteria:EBMYCT00000000305 EnsemblBacteria:EBMYCT00000069167
GeneID:13317715 GeneID:887179 GeneID:925284 KEGG:mtc:MT2990
KEGG:mtu:Rv2922c KEGG:mtv:RVBD_2922c PATRIC:18128344
TubercuList:Rv2922c HOGENOM:HOG000036389 OMA:GDITKFI
ProtClustDB:CLSK881165 Uniprot:Q10970
Length = 1205
Score = 128 (50.1 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 45/164 (27%), Positives = 80/164 (48%)
Query: 835 LNQNILQEYEHRQRQIEDLSTKQE---ADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 891
+N L+E+ + + LST+ E A +K+L +A++DA + L + +
Sbjct: 1000 VNPLALEEFAALEERYNFLSTQLEDVKAARKDLLGVVADVDA---RILQVFNDAFVDVER 1056
Query: 892 TFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTIL 951
F F + GE L E D D I+V+ R G+ ++ SGGE++++ +
Sbjct: 1057 EFRGVFTALFPGGEGRLRLTEPD-DMLTTGIEVEARPPGK-KITRLSLLSGGEKALTAVA 1114
Query: 952 YLVSLQDLTNCPFRVVDEINQGMDPINERKM---FQQLVRAASQ 992
LV++ PF ++DE+ +D +N R++ F+QL R SQ
Sbjct: 1115 MLVAIFRARPSPFYIMDEVEAALDDVNLRRLLSLFEQL-REQSQ 1157
Score = 86 (35.3 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 48/214 (22%), Positives = 88/214 (41%)
Query: 40 KPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEES----GYIKI 95
+PG + V+GPNGSGKS++V A+A +G R + + G S G ++
Sbjct: 23 EPG--ITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGKMEDVIFAGTSSRAPLGRAEV 80
Query: 96 SLRGDTKEEHL-------TIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQ 148
++ D + L +I R++ SE+ NG +V E+ I +
Sbjct: 81 TVSIDNSDNALPIEYTEVSITRRMFRDGASEYEINGSSCRLMDVQELLSDSGIG-REMHV 139
Query: 149 FLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS-SKLKTIECTVKRNGDTL 207
+ Q ++ E + P E+A G ++H EK+ KL T+ + R D
Sbjct: 140 IVGQGKLEEILQSRPEDRRAFIEEAAG----VLKHRKRKEKALRKLDTMAANLARLTDLT 195
Query: 208 NQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+L+ + E ++ A + + + +L
Sbjct: 196 TELRRQLKPLGRQAEAAQRAAAIQADLRDARLRL 229
Score = 55 (24.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 659 QKEREEIINIVQIEKRKR-REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQ 716
Q + EEI+ ++R E + RKRK +++ K D + LA+L D +L Q
Sbjct: 143 QGKLEEILQSRPEDRRAFIEEAAGVLKHRKRKEKALRKLDTMAANLARLTDLTTELRRQ 201
Score = 42 (19.8 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 21/128 (16%), Positives = 58/128 (45%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVD 708
RL++ + + + +++Q+E + R+ E R + + I+++ A++ D
Sbjct: 739 RLLQQRTEQEAVRTQTLDDVIQLETQLRKAQETQ---RVQVAQPIDRQ-----AISAAAD 790
Query: 709 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ 768
+A + ++ + A+ V + + + + A+ E +A++R + + A+
Sbjct: 791 RARGVEVEA-RLAVRTAEERANAVRGR-ADSLRRAAAAEREARVRAQQARAARLHAAAVA 848
Query: 769 ASLHYEDC 776
A++ DC
Sbjct: 849 AAV--ADC 854
Score = 37 (18.1 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 9/51 (17%), Positives = 26/51 (50%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED 418
++++ +LG + + N+ Q++E+E + Q + Q +L+ ++
Sbjct: 720 YEQLGRLGQEARAAEEEWNRLLQQRTEQEAVRTQTLDDVIQLETQLRKAQE 770
>UNIPROTKB|Q8NDV3 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes protein
1B" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0030893 "meiotic cohesin complex" evidence=IDA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 Reactome:REACT_115566 GO:GO:0000775
GO:GO:0003677 GO:GO:0006281 Reactome:REACT_111183 GO:GO:0006310
GO:GO:0030261 GO:GO:0000800 GO:GO:0007062 eggNOG:COG1196
SUPFAM:SSF75553 EMBL:AL008718 EMBL:AL021391 GO:GO:0030893
HOVERGEN:HBG039593 KO:K06636 EMBL:AJ504806 EMBL:BC126208
EMBL:AK125736 IPI:IPI00479260 IPI:IPI00807400 IPI:IPI00893258
RefSeq:NP_683515.3 UniGene:Hs.334176 ProteinModelPortal:Q8NDV3
SMR:Q8NDV3 STRING:Q8NDV3 PhosphoSite:Q8NDV3 DMDM:57015410
PaxDb:Q8NDV3 PRIDE:Q8NDV3 Ensembl:ENST00000357450
Ensembl:ENST00000404354 GeneID:27127 KEGG:hsa:27127 UCSC:uc003bgc.3
UCSC:uc003bgd.3 CTD:27127 GeneCards:GC22M045739 H-InvDB:HIX0027884
HGNC:HGNC:11112 HPA:HPA001500 MIM:608685 neXtProt:NX_Q8NDV3
PharmGKB:PA35962 OMA:QLYHNEK GenomeRNAi:27127 NextBio:49836
Bgee:Q8NDV3 CleanEx:HS_SMC1B Genevestigator:Q8NDV3
GermOnline:ENSG00000077935 Uniprot:Q8NDV3
Length = 1235
Score = 107 (42.7 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 71/374 (18%), Positives = 164/374 (43%)
Query: 658 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQ 717
+QK E+I ++ + E+ + + N + ++++L+ I N++ K+ Q + +
Sbjct: 842 IQKGSEDIDHLKKAEENCLQTV-NELMAKQQQLKDIRVTQ--NSSAEKVQTQIEEERKKF 898
Query: 718 FKYAIEIKNLLVEIVSCKWSYAEKHMA--SIEFDAKIRELEFNLKQHEKLALQASLHYED 775
E+ L E+VS + S +K + ++ D K++++E L +L + E
Sbjct: 899 LAVDREVGKLQKEVVSIQTSLEQKRLEKHNLLLDCKVQDIEIILLSG---SLDDIIEVE- 954
Query: 776 CKKEVEHCRKHLSD-AKRQAESIAFITPELEKEFLEMPTTIE-ELEAAIQDNISQANSIF 833
E E + + K +A I + + + + + L+ IE L +Q SQ + +
Sbjct: 955 MGTEAESTQATIDIYEKEEAFEIDYSSLKEDLKALQSDQEIEAHLRLLLQQVASQEDILL 1014
Query: 834 FL---NQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK----WLPTLRNLV 886
N L+ + + + ++ + EA +KE + E + +K++ + ++
Sbjct: 1015 KTAAPNLRALENLKTVRDKFQESTDAFEASRKEARLCRQEFEQVKKRRYDLFTQCFEHVS 1074
Query: 887 AQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERS 946
I++ + + + + +S + E + + GI G+ + + SGGE+
Sbjct: 1075 ISIDQIYKKLCRNNSAQAFLSPENPEEPYLE-GISYNCV--APGK-RFMPMDNLSGGEKC 1130
Query: 947 VSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLL 1006
V+ + L ++ PF V+DE++ +D N K+ ++ +Q Q +++ L
Sbjct: 1131 VAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKV-SSYIKEQTQDQF-QMIVIS---L 1185
Query: 1007 PDLEYSEACSILNI 1020
+ YS A +++ I
Sbjct: 1186 KEEFYSRADALIGI 1199
Score = 105 (42.0 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 65/293 (22%), Positives = 123/293 (41%)
Query: 28 LHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI-----G 81
+ NF ++ + P R +IGPNGSGKS+++ A++ +G L R +I G
Sbjct: 9 VENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIANL-RVKNIQELIHG 67
Query: 82 AYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFN 140
A++ K S +KI ++ EE T R I SE+ FN +V + + ++
Sbjct: 68 AHIGKPISSSASVKIIYVEESGEEK-TFARII-RGGCSEFRFNDNLVSRSVYIAELEKIG 125
Query: 141 IQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTV 200
I V + Q V + P + + E+ +L ++ EK KL+ E
Sbjct: 126 IIVKAQNCLVFQGTVESISVKKPKERTQFFEEISTSGELIGEY---EEKKRKLQKAEEDA 182
Query: 201 KRNGDTLNQLKALNVEQEKDVERVRQRAELLE--KVESMKKKLPWLKYDMKKAEYIXXXX 258
+ N + + A + + + E + LLE K+ ++ +L L ++ KK +
Sbjct: 183 QFNFNKKKNIAAERRQAKLEKEEAERYQSLLEELKMNKIQLQLFQLYHNEKKIHLLNTKL 242
Query: 259 XXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAIL-------DGDCKKLSSLINE 304
+ HE ++ +K+E +L + + K + +L+N+
Sbjct: 243 EHVNRDLSVKRESLSHHE--NIVKARKKEHGMLTRQLQQTEKELKSVETLLNQ 293
Score = 74 (31.1 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 38/180 (21%), Positives = 83/180 (46%)
Query: 716 QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH--EKLALQASLHY 773
+Q + E+ N+ + + E+ EF KI ++E ++ QH E++ ++ +
Sbjct: 733 EQSQLQSELLNIESQCIMLSEGIKERQRRIKEFQEKIDKVEDDIFQHFCEEIGVENIREF 792
Query: 774 EDCKKEVEHCRKHLSDAKRQ--AESIAFITPELE--KEFLEMPTT-IEELEAAIQDNISQ 828
E+ K V+ R+ D KR + + + +LE + L+ I L+ IQ
Sbjct: 793 EN--KHVK--RQQEIDQKRYFYKKMLTRLNVQLEYSRSHLKKKLNKINTLKETIQKGSED 848
Query: 829 ANSIFFLNQNILQ---EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 885
+ + +N LQ E +Q+Q++D+ Q + ++++ +I+ ++K+L R +
Sbjct: 849 IDHLKKAEENCLQTVNELMAKQQQLKDIRVTQNSSAEKVQ---TQIEEERKKFLAVDREV 905
Score = 73 (30.8 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 48/229 (20%), Positives = 102/229 (44%)
Query: 659 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA----DLN 714
+KE + +Q +++ + +E +N +KR + I+ +++ + L KL D A D
Sbjct: 267 KKEHGMLTRQLQQTEKELKSVETLLN-QKRP-QYIKAKENTSHHLKKL-DVAKKSIKDSE 323
Query: 715 IQQFKYAIEIKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLH 772
Q K +IK L E+ + W EK + E K R++E Q ++ L
Sbjct: 324 KQCSKQEDDIKALETELADLDAAWRSFEKQIEE-EILHKKRDIELEASQLDRYK---ELK 379
Query: 773 YEDCKKEVEHCRKHLS----DAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ 828
E +K+V + L + K E +AF E ++ E+ +++++ I+D+ +
Sbjct: 380 -EQVRKKVATMTQQLEKLQWEQKTDEERLAF---E-KRRHGEVQGNLKQIKEQIEDHKKR 434
Query: 829 ANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+ + + + +++Q E L + E K + F E++ ++ +
Sbjct: 435 IEKLEEYTKTCMDCLKEKKQQEETLVDEIEKTKSRMSEFNEELNLIRSE 483
Score = 51 (23.0 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 14/63 (22%), Positives = 30/63 (47%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDINTALAKLVDQ 709
IED +++K E + K K+++ E ++ + K K E +++N ++L +
Sbjct: 428 IEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVDEIEKTKSRMSEFNEELNLIRSELQNA 487
Query: 710 AAD 712
D
Sbjct: 488 GID 490
Score = 45 (20.9 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 657 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK 695
KLQ E++ + EKR+ E++ ++ K ++E +K
Sbjct: 395 KLQWEQKTDEERLAFEKRRHGEVQGNLKQIKEQIEDHKK 433
>DICTYBASE|DDB_G0288073 [details] [associations]
symbol:DDB_G0288073 "Nucleoprotein TPR" species:44689
"Dictyostelium discoideum" [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR012929
Pfam:PF07926 dictyBase:DDB_G0288073 GO:GO:0005643 GO:GO:0006606
eggNOG:NOG12793 EMBL:AAFI02000109 KO:K09291 RefSeq:XP_636884.1
ProteinModelPortal:Q54JG6 EnsemblProtists:DDB0187764 GeneID:8626440
KEGG:ddi:DDB_G0288073 InParanoid:Q54JG6 OMA:HTERANS Uniprot:Q54JG6
Length = 2037
Score = 120 (47.3 bits), Expect = 6.0e-07, Sum P(3) = 6.0e-07
Identities = 63/290 (21%), Positives = 133/290 (45%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA- 702
+Q EQ + +K +E + + Q+ K + RK + E ++ + +
Sbjct: 1329 LQEEQENMRTLTVSTRKHQEVLAQLEQMNLFKESNIMLKDETRKLGAQVQELQEKLKQSQ 1388
Query: 703 --LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWS-YAEKHMASIE-FDAKIRE--LE 756
L L + L + EI+ +EI + WS +K + + D ++ + LE
Sbjct: 1389 DHLLPLTESNKKLLAENQILHNEIEAQKIEITN--WSGKVQKLLNKYQSIDPEVHQKLLE 1446
Query: 757 FN---LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITP-------ELEK 806
N ++++++L Q ED KK++E +K L D K+Q E + T + +K
Sbjct: 1447 TNETTIRENQELTQQL----EDLKKQLEDLKKQLEDNKKQYEDLKKHTKHWKEEAVKFKK 1502
Query: 807 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
+ LE+ ++ + + Q +S N+ L+E + +++I+ + ++A+K+++++
Sbjct: 1503 DKLELDQSLTQQKELFSTTKQQLDSNTATNEQTLKENQELRKKIQIANANKQANKQQIQQ 1562
Query: 867 FLA---EIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES 913
A EI+ALK K L R L A+ + + +++++ + L ES
Sbjct: 1563 QQANNEEIEALK-KQLEDTRKL-AEDYKKLADDYKKLTDEAKSKLKVFES 1610
Score = 84 (34.6 bits), Expect = 6.0e-07, Sum P(3) = 6.0e-07
Identities = 36/161 (22%), Positives = 76/161 (47%)
Query: 379 LELGVQANQKRLQKSEKEKILNQN--KLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIF 436
+++ + +N + L+++++ I + K +++ +RLKD++ NN LLH S ENI
Sbjct: 1196 MQIKIDSNSQELEQAKQSWIQQEQLLKQQIQELEERLKDLKHHNN-LLH----SQIENIN 1250
Query: 437 EAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLA 496
+ + ++ + + G L++V+ N L++ V + IT+ +
Sbjct: 1251 QQTQQIDRYSQLSSSSSVGNGLVQVSEDE---INNLKELVQVQAREQKITE-VKNESLQQ 1306
Query: 497 KNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQ 537
+N++ N + E+ K+ + E MR L +S R Q
Sbjct: 1307 ENIRLKSTIAANQKAIETVTKKLQEEQENMRTLTVSTRKHQ 1347
Score = 66 (28.3 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 50/207 (24%), Positives = 90/207 (43%)
Query: 369 DKIEKLGSQILELGVQAN-----QKRLQKSEKEKILNQNKL-TLRQCSDRL-KDMEDKNN 421
+K++ S EL Q N Q+R ++S K+ L QN+L L++ +L K+ ED +
Sbjct: 263 EKVQMTSSFETELNSQKNLASLYQERSEESSKKVTLLQNRLDALKEADKKLRKEHEDAYH 322
Query: 422 KLLHA--LRNSGAENIFEAYCWLQQHRH-ELNKEAYGPVLLEVNVSNRAHANYLEDHVGH 478
K+ A + + + + + + +QH +++ V ++S + L D V
Sbjct: 323 KMEEAYDILEADYQKVIKEFDEFKQHTQANAQNQSFNGVGSSSDLS-QMDIPILSDTVKE 381
Query: 479 YIWKSFITQDAGDRDFLAKNL----KPFDVPILNYVSNESSRKEPFQ--ISEEMRALGIS 532
+ S T G RD L + L + +D + NE K Q +S +R +
Sbjct: 382 RL--SDATT-LGSRDELRRELLDMIQRYD-DLTKIALNEKKEKRYVQDHLSHILREVEKK 437
Query: 533 ARLDQVFDAPHAVKEVLISQFGLDSSY 559
A L + + + +L SQ L +SY
Sbjct: 438 APL--IHEQNREYQRLLKSQEKLLNSY 462
Score = 64 (27.6 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 388 KRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRH 447
+R +K KE+ +KLT R ++ +K+ D +KL+ + N + N F+ L+Q +
Sbjct: 128 ERKEKDLKEETETVSKLTER-LNEFIKEKSDLKSKLI-TVENENSSNEFQIQR-LKQEVN 184
Query: 448 ELNKE 452
EL K+
Sbjct: 185 ELRKQ 189
Score = 59 (25.8 bits), Expect = 6.0e-07, Sum P(3) = 6.0e-07
Identities = 29/123 (23%), Positives = 51/123 (41%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQL-PVQHCALVEK 189
E+++ R + NL L + EF + ++L G+ QL L+E
Sbjct: 805 ELMDAVVRHQQSIENLNSQLSRSE--EFKSQAELRL----SNIKGENQLIRASEERLIEM 858
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEKDVER-VRQRAELLEKVE-SMKKKLPWLKYD 247
+ L + +++ D +NQL A E ++ R + LLE +KK+L K
Sbjct: 859 NKTLSLEKLSIENLLDKVNQLNASKESSETELRRRIENDLTLLETQRIQLKKELDQEKQQ 918
Query: 248 MKK 250
K+
Sbjct: 919 HKE 921
Score = 51 (23.0 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 28/120 (23%), Positives = 53/120 (44%)
Query: 125 KVVPKGEVLE-ITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQH 183
K+ + LE I + ++V N Q Q E + K +E+ K + +Q
Sbjct: 39 KIRQLNQTLESIQAKSQVEVTNSQQLFQQ---LEKDYMDSKKDVEQLNKQNITIKKDLQS 95
Query: 184 CAL-VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDV-ERVRQRAELLEKV-ESMKKK 240
L +E+ SK T+ + + L ++ +EKD+ E ++L E++ E +K+K
Sbjct: 96 LKLSIERESKSNTLNRFIDELQQEKSNLHSIIERKEKDLKEETETVSKLTERLNEFIKEK 155
Score = 45 (20.9 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 21/96 (21%), Positives = 45/96 (46%)
Query: 218 EKDVERV-RQRA----ELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXN 272
+KD E+V + R+ ELL K+E M+++ LK + + + +
Sbjct: 733 QKDYEQVMKDRSISDKELLGKIEQMREQNTSLKIQISQIQ-----SENTIFKERLQISTD 787
Query: 273 TLHEFSKPIEG-KKQEKAILDGDCKKLSSLINENSK 307
++ S+ +E +K+ + ++D + S+ N NS+
Sbjct: 788 SVKNQSQDLEQYRKKNQELMDAVVRHQQSIENLNSQ 823
Score = 43 (20.2 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 26/124 (20%), Positives = 48/124 (38%)
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVE-SMKKKLPWLKYDMKKAE 252
+T+E ++ + + L + EKD ++ E L K ++KK L LK +++
Sbjct: 45 QTLESIQAKSQVEVTNSQQLFQQLEKDYMDSKKDVEQLNKQNITIKKDLQSLKLSIERES 104
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDF 312
+ LH IE K+++ KL+ +NE K + D
Sbjct: 105 ---KSNTLNRFIDELQQEKSNLHSI---IERKEKDLKEETETVSKLTERLNEFIKEKSDL 158
Query: 313 LEKV 316
K+
Sbjct: 159 KSKL 162
Score = 42 (19.8 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 9/56 (16%), Positives = 32/56 (57%)
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ-----RAELLEKVESMKKKL 241
S++++++ + + D + K++ + E D+ ++++ + EL E+++ + +L
Sbjct: 1033 SEIESLKDLLAQEKDNIVHYKSIAISNENDLSQLKEEYTKTKVELEERLKDAQAEL 1088
Score = 41 (19.5 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 203 NGDTLNQLKALNVEQEKDVERVRQRAELLEK 233
+ TL Q + N +++E+++Q +LL+K
Sbjct: 704 SSSTLIQQQQSNEILTQELEKIKQSYQLLQK 734
Score = 39 (18.8 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 26/134 (19%), Positives = 57/134 (42%)
Query: 183 HCALVEKSSKLKTIECTVKRNGDTLNQ-LKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
H + K LK TV + + LN+ +K + + K + + + +++ +K+++
Sbjct: 124 HSIIERKEKDLKEETETVSKLTERLNEFIKEKSDLKSKLITVENENSSNEFQIQRLKQEV 183
Query: 242 PWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL 301
L+ K+ ++ L F+ ++ K + +A + KL+
Sbjct: 184 NELR---KQTTFLEDSQKQTTNNLFNEI--KELKSFNLELKLKNENQA---DEILKLNQ- 234
Query: 302 INENSKRRMDFLEK 315
IN+N K++ LEK
Sbjct: 235 INQNLKKQTSELEK 248
>TIGR_CMR|SO_2898 [details] [associations]
symbol:SO_2898 "SMC family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0005524 "ATP binding"
evidence=ISS] [GO:0007059 "chromosome segregation" evidence=ISS]
[GO:0030261 "chromosome condensation" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR011890
PIRSF:PIRSF005719 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005737 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 KO:K03529 TIGRFAMs:TIGR02168 HSSP:Q9X0R4
HOGENOM:HOG000036391 RefSeq:NP_718470.1 ProteinModelPortal:Q7ZAJ7
GeneID:1170588 KEGG:son:SO_2898 PATRIC:23525438 OMA:ELYVEEK
ProtClustDB:CLSK906922 Uniprot:Q7ZAJ7
Length = 1145
Score = 101 (40.6 bits), Expect = 8.2e-07, Sum P(4) = 8.2e-07
Identities = 35/158 (22%), Positives = 71/158 (44%)
Query: 835 LNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFS 894
+N ++E+E + + L + E K L I + ++ + +NE
Sbjct: 945 INLAAIEEFEQQSERKSYLDHQDEDLNKGLATLEEAIRKIDKETRTRFKATFDAVNEDLG 1004
Query: 895 RNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLV 954
R F ++ G L E D + G+ I + G+ + H SGGE++++ + +
Sbjct: 1005 RLFPKVFGGGRAYLALTEDDLLETGVTIMAQ--PPGKKNS-TIHLLSGGEKALTALSLVF 1061
Query: 955 SLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 992
++ L PF ++DE++ +D N + F +L++ SQ
Sbjct: 1062 AIFRLNPAPFCMLDEVDAPLDDANVER-FCRLLKEMSQ 1098
Score = 95 (38.5 bits), Expect = 8.2e-07, Sum P(4) = 8.2e-07
Identities = 47/231 (20%), Positives = 99/231 (42%)
Query: 25 EIELHNFMTFDHLICKPGSR-LNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAY 83
+I+L F +F P + L+ +IGPNG GKS+++ A+ LG + R S+
Sbjct: 5 QIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSMSDV 64
Query: 84 VKRGEESGYIKISLRG-----DTKE----------EHLTIMRKIDTRNKSEWFFNGKVVP 128
+ G S +S+ G + KE E +++ R++ +S +F NG+
Sbjct: 65 IFNGS-SARKPVSVAGVELVFENKEGRLAGQYASYEEISVKRQVSRDGESWYFLNGQKCR 123
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVE 188
+ ++ ++ + + + Q + + P L E+A G +
Sbjct: 124 RKDITDLFMGTGLGPRSYA-IIEQGTISRLIESKPQDLRTFIEEAAGISRY--------- 173
Query: 189 KSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K + +T E ++ + L +L + E K ++++ Q+A+ + +K+
Sbjct: 174 KERRRET-ESRIRHTRENLERLGDIRSELGKQLDKLSQQAKAATQYRELKQ 223
Score = 56 (24.8 bits), Expect = 8.2e-07, Sum P(4) = 8.2e-07
Identities = 13/64 (20%), Positives = 30/64 (46%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN 429
+ ++L SQ+ L Q N LQ++ + + ++L + +L + ++ + A
Sbjct: 236 RFQELQSQMASLSEQINSLELQQAAAQSLAQTSELESTELQVKLSQLAEQEQHAVEAYYL 295
Query: 430 SGAE 433
+G E
Sbjct: 296 TGTE 299
Score = 46 (21.3 bits), Expect = 8.2e-07, Sum P(4) = 8.2e-07
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 646 TEQRLIEDEAAKLQKEREEIINIV--QIEKRKRREM---ENH--INLRKRKLESIEKEDD 698
TE L ED +A L +E E + ++ QIE + E+ EN ++L + + E + +
Sbjct: 430 TEHAL-EDTSASLSQEIELLEQVITQQIEVNQELELALVENTQALDLARGEFEQLSQRLT 488
Query: 699 INTALAKLVDQ 709
A +LV+Q
Sbjct: 489 SMRARFELVEQ 499
Score = 46 (21.3 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 17/77 (22%), Positives = 34/77 (44%)
Query: 359 QTVPAYEPPHDKIEKLGSQILELGVQANQ--KRLQKSEKEKILNQNKLTLRQCSDRLKDM 416
+ V A K+++L Q++++ NQ +RL + + +K +L + K
Sbjct: 643 ECVQARAIQQSKLDELSQQLIQVRDSVNQGTQRLHQLQLDKATKSTQLNNAEAL--AKQR 700
Query: 417 EDKNNKLLHALRNSGAE 433
E K +L + + AE
Sbjct: 701 EAKRGQLEDTVARTHAE 717
Score = 44 (20.5 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 653 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 709
+ A L K+RE Q+E R L + + E+ED++ ALA+ +D+
Sbjct: 691 NNAEALAKQREAKRG--QLEDTVARTHAELAELAGQLMLLAEQEDELADALAQSIDK 745
Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(5) = 3.8e-05
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 387 QKRLQ-KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA 432
Q +LQ + + K+++Q +L + + ++ ++ HAL ++ A
Sbjct: 393 QHKLQLELHRSKLVHQQQLNAHKTQLHQEQQQELSSLTEHALEDTSA 439
Score = 39 (18.8 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 276 EFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMD 311
+ + ++ +KQ A L ++LS + +N K ++D
Sbjct: 302 KLEQQLQSQKQRDAQLHTQLEQLSEQLTQN-KAKLD 336
Score = 37 (18.1 bits), Expect = 5.6e-05, Sum P(4) = 5.6e-05
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 361 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTL 406
V AY +I KL Q+ + Q Q + + L QNK L
Sbjct: 290 VEAYYLTGTEIAKLEQQLQSQKQRDAQLHTQLEQLSEQLTQNKAKL 335
>DICTYBASE|DDB_G0276101 [details] [associations]
symbol:smc3 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=ISS] [GO:0008278
"cohesin complex" evidence=ISS] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=ISS] [GO:0006275 "regulation of DNA
replication" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000785 "chromatin" evidence=ISS] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0276101 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0006275 GO:GO:0000785 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0046982 GO:GO:0007064 GO:GO:0008278
eggNOG:COG1196 SUPFAM:SSF75553 HSSP:P32908 KO:K06669
RefSeq:XP_643274.1 ProteinModelPortal:Q552D9 STRING:Q552D9
PRIDE:Q552D9 EnsemblProtists:DDB0219934 GeneID:8620317
KEGG:ddi:DDB_G0276101 InParanoid:Q552D9 OMA:EHERRES
ProtClustDB:CLSZ2734975 Uniprot:Q552D9
Length = 1437
Score = 104 (41.7 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 81/365 (22%), Positives = 158/365 (43%)
Query: 647 EQRL-IEDEAAKLQKEREEIINIVQIEKRKR-REMENHI---NLRKRKL--ESIEKE-DD 698
EQ++ I + KLQ + ++ N + KR E+E I N KL E +KE D+
Sbjct: 802 EQKISISSDVMKLQSRKNQMTNQLNQNYGKRLMEIEGEIKSLNPENSKLQIELKQKEIDE 861
Query: 699 INTALAKLVDQAADLNIQQFKYA-IEIKNLLVEIVSCKW---SYAEKHMAS-IEFDAKIR 753
IN + + ++ L +Q EIK + V I + K + A++ +A + ++ +
Sbjct: 862 INIEIDGVREKLESL-VQSLNEKDAEIKPIKVSIDALKQQTSTIADQLVADGKKMESLLA 920
Query: 754 ELE-FN----LKQHEKLALQASLHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEKE 807
+++ FN KQ L+ ++E+ KK + + L+ + S+ + + +
Sbjct: 921 QIQSFNKVRDAKQLRVLSKGDRFNFEELKKYNKDQSVEELNKINKSLASLRHVNQKANDQ 980
Query: 808 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 867
F LEA +D + ++N+ Q +++ ++++ E ++ K +
Sbjct: 981 FNSFTNQYNSLEAR-RDELYESNASI---QLLIKTLDNKKD--EAIARTFSGVAKNFTQV 1034
Query: 868 LAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFR 927
E+ L R + E + +E A GE + GI I+V F
Sbjct: 1035 FKELIPGGSAKLVMKRQMDEDEGE--GEDPKEWA-DGETP----KGLLTFTGIGIQVSFG 1087
Query: 928 QSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLV 987
+ G E S SGG++++ + + +LQ PF ++DEI+ +D N R +++
Sbjct: 1088 E-GH-EPCSMRQLSGGQKTLVALALIFALQRTDPAPFYLLDEIDAALDH-NYRVAVSKMI 1144
Query: 988 RAASQ 992
R S+
Sbjct: 1145 RKHSR 1149
Score = 88 (36.0 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 47/216 (21%), Positives = 93/216 (43%)
Query: 34 FDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGG---DTQLLGRATSIGAYVKRGEES 90
F + PG N+V G NG+GKS+L AI LG R + +Y ++
Sbjct: 19 FTSITLHPG--FNVVTGRNGAGKSNLFAAIRFLLGDLNVGNNSEDRLKLLHSYGGNTMQT 76
Query: 91 GYIKISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
GY++I D + I +R+ +K E+ + K +V + + +
Sbjct: 77 GYVEIVF--DNSDHRFPIDKTEFSLRRTFGTSKDEFSIGNNKLSKADVRNMFEAAGFSSS 134
Query: 145 NLTQFLPQDRVCEFAKLSP---VKLLEETEKAVGDPQLPVQHCAL-VEKSSKLKTIECTV 200
N + Q ++ A + + +L+E A + + A+ +E SK IE +
Sbjct: 135 NPYYIVQQGKINTLALMKDSDRLDMLKEVAGATVYEERKRESVAIMIESESKSIKIEEFL 194
Query: 201 KRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVES 236
K + ++K L+ E+ K+++ + + E+ ++ E+
Sbjct: 195 KYIDE---RIKVLDKER-KELQLYQTQIEMKKQFEA 226
Score = 84 (34.6 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 44/210 (20%), Positives = 95/210 (45%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES-IEKEDDINTALAKL 706
++L+ E AKL+K ++E +++ K K +E I + K KLE I +EDDI+ L+
Sbjct: 314 KKLLSKEQAKLEKLQKEQ-DLLSGSKEK---LEKEIEIIKPKLEELIGQEDDIDNKLS-- 367
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 766
+ + N+Q+ Y +K + + S K + +K++ + +K+ ++ + Q+E+ A
Sbjct: 368 ---STERNLQEL-Y---VKQGMFQFKS-K-TERDKYLG--DESSKLEDI---VNQYEQQA 413
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 826
ED K+ + K ++ + A I E E+ +++E +
Sbjct: 414 QSLEEDVEDMKQIQQSKGKQFDNSMASKDKEAEIVKTAELRVHELKLEKDQIEQRVSSTF 473
Query: 827 SQANSIFFLNQNILQEYEHRQRQIEDLSTK 856
N + E++ +R ++ + +
Sbjct: 474 QSINEMKSNLTEHRNEWKKAERNLQTIMNR 503
Score = 72 (30.4 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 52/243 (21%), Positives = 99/243 (40%)
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
H K A+ +Y K ++ ++ + ++Q + + E E E ++ ++ ++
Sbjct: 653 HSKGAVTGG-YYSKKKLKLSSYQQ-IKHWRQQYQQLQTQLTEKESELEKLQASLLSIQKT 710
Query: 822 IQDNISQANSIFFLNQNILQEYE----HRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
I+ + N I N N E + R IE L KQ LK+ +I K+
Sbjct: 711 IRTKEDEKNKILSNNDNSRVELDKIISERTMYIEILEKKQTI----LKKLKIDIQNCKD- 765
Query: 878 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDF--DKFGILIKVKFRQSGQLEVL 935
T+ QIN F+ E ++L E K I V QS + ++
Sbjct: 766 ---TIDGYQKQINTAFNTKLTEEESNLLLTLSESSIQLKEQKISISSDVMKLQSRKNQMT 822
Query: 936 SAHHQSGGERSVSTILYLVSLQDLTNCPFRV------VDEINQGMDPINERKMFQQLVRA 989
+ +Q+ G+R + + SL N ++ +DEIN +D + E+ + LV++
Sbjct: 823 NQLNQNYGKRLMEIEGEIKSLNP-ENSKLQIELKQKEIDEINIEIDGVREK--LESLVQS 879
Query: 990 ASQ 992
++
Sbjct: 880 LNE 882
Score = 63 (27.2 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 373 KLGS--QILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNS 430
KL S QI Q Q + Q +EKE L + + +L ++ ED+ NK+L NS
Sbjct: 669 KLSSYQQIKHWRQQYQQLQTQLTEKESELEKLQASLLSIQKTIRTKEDEKNKILSNNDNS 728
Query: 431 GAE 433
E
Sbjct: 729 RVE 731
Score = 63 (27.2 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEK---ILNQNKLT--LRQCSDRLKDMED 418
Y+ + ++ + I+ L + R+ EKEK +++ +K + L + +D LK E
Sbjct: 214 YQTQIEMKKQFEAYIIHLEANESNDRILDLEKEKEKYLIHSSKESKKLERFTDELKKDES 273
Query: 419 KNNKLLHALRNSGAENI 435
K NKLL ++ E I
Sbjct: 274 KFNKLLSEIKKIDNEKI 290
Score = 48 (22.0 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI 693
+Q EQ L+ KL+KE E I ++ + +++N ++ +R L+ +
Sbjct: 327 LQKEQDLLSGSKEKLEKEIEIIKPKLEELIGQEDDIDNKLSSTERNLQEL 376
Score = 46 (21.3 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 22/110 (20%), Positives = 45/110 (40%)
Query: 211 KALNVEQEKDVERVRQRAELLE-KVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXX 269
K L+ EQ K +E++++ +LL E ++K++ +K K E I
Sbjct: 315 KLLSKEQAK-LEKLQKEQDLLSGSKEKLEKEIEIIK--PKLEELIGQEDDIDNKLSSTER 371
Query: 270 XXNTLH--EFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVD 317
L+ + + K + L + KL ++N+ ++ E V+
Sbjct: 372 NLQELYVKQGMFQFKSKTERDKYLGDESSKLEDIVNQYEQQAQSLEEDVE 421
Score = 44 (20.5 bits), Expect = 7.0e-05, Sum P(4) = 7.0e-05
Identities = 13/82 (15%), Positives = 36/82 (43%)
Query: 394 EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIF----EAYCWLQQHRHEL 449
+K+ IL + K+ ++ C D + + + N + N+ E+ L++ + +
Sbjct: 748 KKQTILKKLKIDIQNCKDTIDGYQKQINTAFNTKLTEEESNLLLTLSESSIQLKEQKISI 807
Query: 450 NKEAYGPVLLEVNVSNRAHANY 471
+ + + ++N+ + NY
Sbjct: 808 SSDVMKLQSRKNQMTNQLNQNY 829
Score = 44 (20.5 bits), Expect = 7.0e-05, Sum P(4) = 7.0e-05
Identities = 46/206 (22%), Positives = 80/206 (38%)
Query: 391 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYC--WLQQHRHE 448
+ S+ E I+NQ + + + ++DM+ NS A EA + HE
Sbjct: 398 ESSKLEDIVNQYEQQAQSLEEDVEDMKQIQQSKGKQFDNSMASKDKEAEIVKTAELRVHE 457
Query: 449 LNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPILN 508
L E + + R + + + KS +T+ + +NL+ I+N
Sbjct: 458 LKLE-------KDQIEQRVSSTF--QSINEM--KSNLTEHRNEWKKAERNLQT----IMN 502
Query: 509 YVSNESSRKEPFQISEEMRALGISARLDQVFDA--PHAVKEV-LISQFGLDSSYIGSKET 565
+E + QI +E + GI L ++FD P A + ++ GL + + +T
Sbjct: 503 RPLSEGLTRLN-QIRQEGKIKGIHGPLVELFDIVEPEATLALEVVGGNGLFHVVVDTDDT 561
Query: 566 DQKAD---NVAKLGILDFWTPENHYR 588
K N +G L F P N R
Sbjct: 562 ASKILEILNTENIGRLSF-IPLNRVR 586
>WB|WBGene00010306 [details] [associations]
symbol:F59A2.6 species:6239 "Caenorhabditis elegans"
[GO:0000042 "protein targeting to Golgi" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 SMART:SM00755
EMBL:Z34801 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:Z66514 PIR:T22976
RefSeq:NP_497706.1 UniGene:Cel.10377 HSSP:Q13439
ProteinModelPortal:G5EEK2 SMR:G5EEK2 IntAct:G5EEK2
EnsemblMetazoa:F59A2.6 GeneID:175445 KEGG:cel:CELE_F59A2.6
CTD:175445 WormBase:F59A2.6 OMA:QTRKDID NextBio:888194
Uniprot:G5EEK2
Length = 1133
Score = 152 (58.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 52/248 (20%), Positives = 114/248 (45%)
Query: 644 MQTEQRLIEDEAAKLQKEREEII---NIVQIEKRKRREMENHINLRKRKLESIEKE-DDI 699
+ +EQ ++++ KL++ EE++ +Q K E E + K +LE++ K+ D
Sbjct: 125 LNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSS 184
Query: 700 NTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI--RELEF 757
T+L + D + IQ + K+ VE++ K EK+M+ +E ++
Sbjct: 185 ETSLKEFSDMIEAMKIQLINCEKQ-KDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTS 243
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRK------HLSDAKRQAESIAF--ITPELEKEFL 809
+KQH + A E+ + +E+ +K +L A ES A IT ++E
Sbjct: 244 EMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKK 303
Query: 810 EMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHR-QRQIEDLSTKQEADKKELKRFL 868
E+ + +E ++ +++ + + + Q +Q+ + + ++ ++ E +K ++
Sbjct: 304 ELEASEKE-KSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLA 362
Query: 869 AEIDALKE 876
E++ KE
Sbjct: 363 GELENAKE 370
Score = 112 (44.5 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 63/286 (22%), Positives = 132/286 (46%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN--LR------KRKLESIEKE-- 696
E+ ++ + +L E+EE + +V+++ ++ + + + LR + KL+ IE+E
Sbjct: 577 EKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKK 636
Query: 697 DDINTALAKLVDQAADLN-IQQFKYAIEI-KNLLVEIVSCKWSYAEKHMASIE--FDAKI 752
+ +N +LA+ Q A + +Q + +E+ K +E+V + A + +S+E A+I
Sbjct: 637 NALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEI 696
Query: 753 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAF--ITPELEKEFLE 810
+LE L++ EK +Q S E +E+ + + K + E IA I +L E
Sbjct: 697 EKLEAKLQEIEKAKMQNSSKREQKVRELSNLNE-----KMRVEFIAKEKIISDLRSELST 751
Query: 811 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 870
+ T + +A ++ + + + E+ + +E++ + E KEL+ +
Sbjct: 752 ISTELVVQKATVEKTKMDFGELETREKRATADRENEK--MEEIRLR-ETFAKELETMGSA 808
Query: 871 IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDE-HESDF 915
++ +KE L+ + + F+E + S DE ES F
Sbjct: 809 LE-VKETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQDEASESRF 853
Score = 107 (42.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 55/279 (19%), Positives = 132/279 (47%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E + A++Q + +I + ++EK ++ E+ + L++ S E+ + + +L +A
Sbjct: 504 EQQTAQIQNLQTQIYQM-EVEKEEKVELVK-VQLQQAAQSSSSAEEALRAEIEQL--EAK 559
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL------ 765
++Q K A + +LL E + A+ H +E + K+ ++ L+Q +
Sbjct: 560 LKAVEQAK-AEALNSLLAEKEHLQ---AQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQ 615
Query: 766 ALQASLHYEDCK-KEVEHCRKH-----LSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
AL+A + + K +E+E +K+ L++ ++Q I + +L + +E +E ++
Sbjct: 616 ALRAEIEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVK 675
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 879
+Q ++S+ + +++ E + ++IE + Q + K+E K + E+ L EK
Sbjct: 676 VQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEK-AKMQNSSKREQK--VRELSNLNEKMR 732
Query: 880 PTL---RNLVAQINETFSRNFQEMAVAGEVSLDEHESDF 915
+++ + S E+ V + ++++ + DF
Sbjct: 733 VEFIAKEKIISDLRSELSTISTELVVQ-KATVEKTKMDF 770
Score = 91 (37.1 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 69/352 (19%), Positives = 152/352 (43%)
Query: 651 IEDEAAKLQKER-EEIINIVQIEKRKRREMEN---HINLRKRKLESIEKEDDINTALAKL 706
+E E QK EE+ ++ + +EN + K+KLE+++KE K
Sbjct: 429 LEKELQNAQKRSSEELETANEMVRSLTATLENSNSETEILKQKLETLDKELQARQQTEKA 488
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 766
+ + ++N+ A E + +I + + + + +E + K+ ++ L+Q A
Sbjct: 489 LTE--EINVLTTSLA-EKEQQTAQIQNLQ---TQIYQMEVEKEEKVELVKVQLQQ----A 538
Query: 767 LQASLHYEDC-KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE-----MPTTIEELEA 820
Q+S E+ + E+E L A QA++ A + EKE L+ + EE
Sbjct: 539 AQSSSSAEEALRAEIEQLEAKLK-AVEQAKAEALNSLLAEKEHLQAQLHQLGVEKEEKLE 597
Query: 821 AIQDNISQA-NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 879
++ + QA S + Q + E E + +++++ +E K L LAE KE+
Sbjct: 598 MVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEI---EEEKKNALNASLAE----KEQQT 650
Query: 880 PTLRNLVAQINETFSRNFQEMAVAGEVSLDE--HESDFDKFGILIKVKFRQSGQLEVLSA 937
++ L AQ+++ +++ + +V L + S + + +++ ++ E+ A
Sbjct: 651 AQIQELQAQLHQLEVEKEEKLEMV-KVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEKA 709
Query: 938 HHQSGGERSVSTILYLVSLQDLTNCPF----RVVDEINQGMDPINERKMFQQ 985
Q+ +R + L +L + F +++ ++ + I+ + Q+
Sbjct: 710 KMQNSSKRE-QKVRELSNLNEKMRVEFIAKEKIISDLRSELSTISTELVVQK 760
Score = 87 (35.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 88/439 (20%), Positives = 165/439 (37%)
Query: 151 PQDRVCEFAKLSPVK---LLEETEK-AVGDPQLPVQHCALVEKSSKLKTIECTVKRNG-- 204
P + C F L + L E+ E+ + Q + +V++ S+L+ E K +
Sbjct: 3 PNEENCFFISLFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQ-EMLEKCDALQ 61
Query: 205 DTLNQLKALNVEQEKDVERVRQRAELLE-KVESMKKKLPWLKYDMKKAEYIXXXXXXXXX 263
+N+ KAL E + + V Q+AE ++ ++E KK L K + +
Sbjct: 62 AEVNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAFENEKEQEREEQLAKA 121
Query: 264 XXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDXXXXXX 323
N L E +K +E ++E G ++L+ + E+ K +++
Sbjct: 122 MEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKL 181
Query: 324 XXKYKXXXXXXXXXXXXXXXILKA-RXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELG 382
++ + Q + E +E + Q+L
Sbjct: 182 DSSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVE-VQKQLLLES 240
Query: 383 VQANQKRLQKSEKEKILNQNKLTLRQCSDRLK-DMEDKNNKLLHALRNSGAENIFEAYCW 441
+ K Q +E +I+ + + + LK D E++ N L AL + + I E
Sbjct: 241 TTSEMK--QHAEAAEIVKKQLEEAQSSIENLKKDAENERN-LKTALESDESSAISEITKQ 297
Query: 442 LQQHRHELN-KEAYGPVLLE-VNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNL 499
++ + EL E L E ++ + H ED + K++ + A +AK+
Sbjct: 298 MEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDI--QKLQKTWELEMAK----IAKST 351
Query: 500 KPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSY 559
+ + + KE ++ EE + GI + DA VK VL Q S
Sbjct: 352 EDEKLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVK-VLKEQLERAQSA 410
Query: 560 IGSKE---TDQKADNVAKL 575
+ S + + QKAD + +L
Sbjct: 411 LESSQELASSQKADKIQEL 429
>UNIPROTKB|G8JLG1 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553
EMBL:Z97054 EMBL:AL161779 HGNC:HGNC:11111 ChiTaRS:SMC1A
ProteinModelPortal:G8JLG1 SMR:G8JLG1 Ensembl:ENST00000375340
Bgee:G8JLG1 Uniprot:G8JLG1
Length = 516
Score = 154 (59.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 66/242 (27%), Positives = 109/242 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQV---NNLT-QFLPQDRVCEFAKLSPVKLLEETEKAVGDPQ-----LPVQHCALVEK 189
I + N L Q R+ E A L +E EK D + L ++ VE
Sbjct: 124 LGILIKARNFLVFQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVET 183
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ-RAELLEKVESMKKKLPWLKYDM 248
+K+K ++ N + +L+ ++ +E ++ EL E+VE K+++ + ++
Sbjct: 184 EAKIKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKEL 243
Query: 249 KK 250
+
Sbjct: 244 NQ 245
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 490 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 549
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 421 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 478
Query: 550 -ISQFGLDSS 558
SQ L+ +
Sbjct: 479 KYSQSDLEQT 488
>UNIPROTKB|J9P1C1 [details] [associations]
symbol:KIF20B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR001752 InterPro:IPR019821
Pfam:PF00225 PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067
SMART:SM00129 GO:GO:0005524 GO:GO:0005875 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10
GeneTree:ENSGT00530000063172 EMBL:AAEX03015394
Ensembl:ENSCAFT00000048651 Uniprot:J9P1C1
Length = 1740
Score = 143 (55.4 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 65/272 (23%), Positives = 126/272 (46%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMEN-HINLRKRKLESIEKEDDINTALAKLVDQA 710
+DE + K +EI+ I + R +++ NL+ +SI+ D++ KL ++
Sbjct: 1093 KDECSHSAKLEQEILEKESIILKLERNLKDFQANLQ----DSIKNTKDLSEREVKLKEEI 1148
Query: 711 ADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFD-AKIRELEFNLKQHEKLAL 767
+ L N+Q K+++++K E W AEK + A I+ L+ +L++ E+
Sbjct: 1149 SQLTSNLQDAKHSLKLKE---EEKETSWHTAEKLKEELSASSALIQNLKADLQRKEEDYA 1205
Query: 768 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 827
+ D KK++E +K +S + + + + ELEK+ + I+ + IQ
Sbjct: 1206 ELKEKLADAKKQIEQVQKEVSVMRDEEKLLRIKVHELEKKKNQCSQEIDIKQRTIQQLKE 1265
Query: 828 QANSIFFLNQNI---LQEYEH-------RQRQIEDLST---KQEADKKELKRFLA----E 870
Q + NQN+ +Q+YE +++ IED+ +QE + E R L E
Sbjct: 1266 QLS-----NQNVEEAIQQYERVCKDLNVKEKIIEDMRMTLEEQEETQAEQDRVLEAKLEE 1320
Query: 871 IDALK---EKWLPTLRNLVAQINETFSRNFQE 899
+ L EKW ++L A+ N+ ++ ++
Sbjct: 1321 AEGLATELEKWKEKCKDLEAKSNQRSNKELED 1352
Score = 58 (25.5 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSD---RLKDMEDKNNKLL 424
H IE + + E+ +++K Q E E+ + + + L+ C D RLK +E++ NK
Sbjct: 971 HSSIEAIWEECKEIVKGSSKKSHQIQELEQQIEKLQAELKGCMDENNRLK-IEERENKNK 1029
Query: 425 HALRNSGAENIFEAYCWLQQHRHELN 450
L EN+ + L+Q E N
Sbjct: 1030 GDLLKE-KENLIQQ---LKQELQEKN 1051
Score = 54 (24.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 202 RNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+NG+ ++ +E++K ++ +LL+ +E +KKKL
Sbjct: 547 QNGELTDEDLDKTLEEDKAFISYEEKRKLLDLIEDLKKKL 586
Score = 52 (23.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 17/83 (20%), Positives = 43/83 (51%)
Query: 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ 226
++E E+ + Q ++ C ++++++LK E K GD L + + L + +++++
Sbjct: 995 IQELEQQIEKLQAELKGC--MDENNRLKIEERENKNKGDLLKEKENLIQQLKQELQEKNT 1052
Query: 227 RAEL-LEKVESMKKKLPWLKYDM 248
++ ++ V K+ L L D+
Sbjct: 1053 SLDVQVQHVVEGKRALSELTQDI 1075
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/75 (21%), Positives = 34/75 (45%)
Query: 367 PHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQ--NKLTLRQCSDRLKDMEDKNNKLL 424
P+ + E++ S+ L Q + +Q E + N L + + + +KD E + +
Sbjct: 206 PYQEKEEVASKSALLR-QIKEVVMQNDSYESLYGSLTNSLNIPESEESMKDCEQASLNMN 264
Query: 425 HALRNSGAENIFEAY 439
+ ++ S + FE Y
Sbjct: 265 NNIKFSVWVSFFEIY 279
Score = 44 (20.5 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 20/76 (26%), Positives = 31/76 (40%)
Query: 359 QTVPAYEPPHDKIE-KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME 417
Q P E K+E K LE+ + L K+++E + Q +L RQ + E
Sbjct: 651 QEEPVNEDCAVKVETKEAIACLEIKFNQVKAELAKTKEELVKTQEELKKRQ-----NESE 705
Query: 418 DKNNKLLHALRNSGAE 433
N L+ L S +
Sbjct: 706 INLNSLIQELEKSNKD 721
Score = 43 (20.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 399 LNQNKLTLRQCSDRLKDMEDKNNKLLHA-LRNSGAENIFEAY 439
+N + LTL +C + LK+ E K+ H R S + F+++
Sbjct: 403 INTSLLTLGKCINVLKNSE-KSKFQQHVPFRESKLTHYFQSF 443
>UNIPROTKB|P14105 [details] [associations]
symbol:MYH9 "Myosin-9" species:9031 "Gallus gallus"
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000146
"microfilament motor activity" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0001525 "angiogenesis"
evidence=ISS] [GO:0001725 "stress fiber" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005826 "actomyosin
contractile ring" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0006509 "membrane
protein ectodomain proteolysis" evidence=ISS] [GO:0008305 "integrin
complex" evidence=ISS] [GO:0008360 "regulation of cell shape"
evidence=ISS] [GO:0015031 "protein transport" evidence=ISS]
[GO:0015629 "actin cytoskeleton" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0030048 "actin filament-based movement"
evidence=ISS] [GO:0030220 "platelet formation" evidence=ISS]
[GO:0030224 "monocyte differentiation" evidence=ISS] [GO:0031252
"cell leading edge" evidence=ISS] [GO:0031532 "actin cytoskeleton
reorganization" evidence=ISS] [GO:0032154 "cleavage furrow"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0043495 "protein anchor" evidence=ISS] [GO:0043534 "blood
vessel endothelial cell migration" evidence=ISS] [GO:0051015 "actin
filament binding" evidence=ISS] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0043234
GO:GO:0042803 GO:GO:0008360 GO:GO:0015031 GO:GO:0051015
GO:GO:0001525 GO:GO:0016887 GO:GO:0000910 GO:GO:0031532
GO:GO:0000146 GO:GO:0001725 GO:GO:0001726 GO:GO:0043495
GO:GO:0005826 GO:GO:0006509 GO:GO:0043534 Reactome:REACT_115433
GO:GO:0032154 GO:GO:0030048 eggNOG:COG5022 GO:GO:0016459
GO:GO:0030224 GO:GO:0030220 HOVERGEN:HBG004704 KO:K10352 CTD:4627
EMBL:M26510 IPI:IPI00572165 PIR:A33977 RefSeq:NP_990808.1
UniGene:Gga.4462 ProteinModelPortal:P14105 SMR:P14105 STRING:P14105
PRIDE:P14105 GeneID:396469 KEGG:gga:396469 NextBio:20816508
Uniprot:P14105
Length = 1959
Score = 116 (45.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 63/250 (25%), Positives = 122/250 (48%)
Query: 652 EDEAAKLQKEREEIINIVQIE-KRKRREMENHINLRKR-KLESIEKEDDINTALAKLVDQ 709
E++ +L ++ E+ V++E +RK+R + + RK+ +L+ + E I+TA K D+
Sbjct: 1581 EEKRKQLIRQVREME--VELEDERKQRSIA--VAARKKLELDLKDLESHIDTA-NKNRDE 1635
Query: 710 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-HEKLALQ 768
A +++ K ++K+ + E+ + S E + E + K++ +E + Q E+LA
Sbjct: 1636 AIK-HVR--KLQAQMKDYMRELEDTRTSREEILAQAKENEKKLKSMEAEMIQLQEELAAA 1692
Query: 769 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE----LEKEFLEMPTTIEELEA---A 821
E K++ + R L+D + + E LE ++ +EE +
Sbjct: 1693 -----ERAKRQAQQERDELADEIANSSGKGALAMEEKRRLEARIAQLEEELEEEQGNTEI 1747
Query: 822 IQDNISQAN-SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKWL 879
I D + +AN I +N ++ E + Q+ E+ + E KELK L E++ A+K K+
Sbjct: 1748 INDRLKKANLQIDQMNADLNAERSNAQKN-ENARQQMERQNKELKLKLQEMESAVKSKYK 1806
Query: 880 PTLRNLVAQI 889
T+ L A+I
Sbjct: 1807 ATITALEAKI 1816
Score = 92 (37.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 42/161 (26%), Positives = 81/161 (50%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEW--FFNGKVVPKGEVLEITKRFNIQ 142
+R E S +K+ L+G EH +K+D + + F G+ V K E+ E + ++
Sbjct: 1225 ERAELSNEVKVLLQGKGDAEHKR--KKVDAQLQELQVKFTEGERV-KTELAERVNKLQVE 1281
Query: 143 VNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLK-TIECTVK 201
++N+T L Q + KL+ K E + D Q L+++ ++LK + +K
Sbjct: 1282 LDNVTGLLNQSD-SKSIKLA--KDFSALESQLQDTQ------ELLQEETRLKLSFSTKLK 1332
Query: 202 RNGDTLNQLKALNVEQEKDVER-VRQRAELLEK--VESMKK 239
+ D N LK +E+E++ +R + ++ +L++ VE+ KK
Sbjct: 1333 QTEDEKNALKE-QLEEEEEAKRNLEKQISVLQQQAVEARKK 1372
Score = 90 (36.7 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 62/316 (19%), Positives = 145/316 (45%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEK-RKRREMENHINLRKRKLESIEK-EDDINTALA 704
+++L E+E AK E++ I+++Q + R++M++ + + E+ +K + D+ +
Sbjct: 1342 KEQLEEEEEAKRNLEKQ--ISVLQQQAVEARKKMDDGLGCLEIAEEAKKKLQKDLESLTQ 1399
Query: 705 KLVDQAADLN-IQQFKYAI--EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 761
+ ++ A + +++ K + E+ ++ V++ + + + +FD + E E N+
Sbjct: 1400 RYEEKIAAYDKLEKTKTRLQQELDDIAVDLDHQRQTVSNLEKKQKKFDQLLAE-EKNISA 1458
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
K A + E +E E K LS A+ E+I ELE+ + T +E+L ++
Sbjct: 1459 --KYAEERD-RAEAEAREKE--TKALSLARALEEAIEQ-KAELERVNKQFRTEMEDLMSS 1512
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
D + + + + Q+ E + Q+E+L + +A + R A+K ++
Sbjct: 1513 KDDVGKSVHELEKAKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNQQAMKAQFD-- 1570
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQS 941
R+L+ + + + Q + E+ + E E + + I + + + L+ L +H +
Sbjct: 1571 -RDLLGRDEQNEEKRKQLIRQVREMEV-ELEDERKQRSIAVAARKKLELDLKDLESHIDT 1628
Query: 942 GGERSVSTILYLVSLQ 957
+ I ++ LQ
Sbjct: 1629 ANKNRDEAIKHVRKLQ 1644
>UNIPROTKB|F1SM58 [details] [associations]
symbol:F1SM58 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030893 "meiotic cohesin complex" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR024704 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005634 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 GeneTree:ENSGT00580000081569
EMBL:CU856016 EMBL:CU633534 Ensembl:ENSSSCT00000000014
Uniprot:F1SM58
Length = 1233
Score = 111 (44.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 73/379 (19%), Positives = 170/379 (44%)
Query: 658 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQ 717
+QK RE+I N+ + E+ + ++ + ++++L+ + + N + K+ Q + +
Sbjct: 836 VQKGREDIDNLKKTEENCLKIVDE-LTEKRQRLKDVFVTQNSN--IEKVQAQTEEERKKF 892
Query: 718 FKYAIEIKNLLVEIVSCKWSYAEKHMA--SIEFDAKIRELEFNLKQHEKLALQASLHYED 775
E+ L E ++ + S +K + ++ D K++++E L +L+ + E
Sbjct: 893 LAVDREVGKLQKEALAIQTSLEQKRLEKHNMLLDCKVQDIEIILLSG---SLEDIIEVES 949
Query: 776 CKK---EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA----AIQDNISQ 828
+ E E + +D Q E+I + L +E L T +E+EA +Q SQ
Sbjct: 950 SVQLGAEAESTQA-TTDVYEQEEAIE-VDYSLLREDLRALQTDKEVEAHLKLLLQQVASQ 1007
Query: 829 ANSIFFL---NQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK----WLPT 881
+ + N L+ + + ++++ + EA +KE + E + +K++ +
Sbjct: 1008 EDILLKTAAPNLRALENLKAVRDKLQESTDAFEASRKEARMCRQEFEQVKKRRYDLFSQC 1067
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQS 941
++ I++ + + + + +S + E + + GI G+ + + S
Sbjct: 1068 FEHVSVSIDQIYKKLCRNNSAQAFLSPENPEEPYLE-GISYNCV--APGK-RFMPMDNLS 1123
Query: 942 GGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLL 1001
GGE+ V+ + L ++ PF V+DE++ +D N K+ ++ +Q Q ++
Sbjct: 1124 GGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKV-SSYIKEQTQEQF-QMIII 1181
Query: 1002 TPKLLPDLEYSEACSILNI 1020
+ L + YS+A +++ I
Sbjct: 1182 S---LKEEFYSKADALIGI 1197
Score = 95 (38.5 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 64/301 (21%), Positives = 125/301 (41%)
Query: 21 GNIIEIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
G++ + + NF ++ + P R +IGPNGSGKS+++ A++ +G L R +
Sbjct: 2 GHLELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIANL-RVKN 60
Query: 80 I-----GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVL 133
I GA++ K S ++I ++ EE T R I SE+ F+ V + +
Sbjct: 61 IQELIHGAHIGKPVSSSASVRIVYVEESGEEK-TFTRII-RGGCSEFHFDDNPVSRSSYI 118
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
+ ++ I V + Q V + P + + E+ +L ++ EK +L
Sbjct: 119 KELEKIGIIVKARNCLVFQGTVESISLKKPKERTQFFEEISTSGELVREY---EEKKRRL 175
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ---RAELLEKVESMKKKLPWLKYDMKK 250
+ E + N + + A + + E VR+ RA + +L L ++ +K
Sbjct: 176 QKAEEDAQFNFNKKKNIAAERKHAKLEKEEVRRHDSRAPRCTENRISLLQLFQLYHNERK 235
Query: 251 AEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAIL-------DGDCKKLSSLIN 303
++ + HE ++ KK+E +L + + K L +L+N
Sbjct: 236 IHFLNTELKRVNEDLSVTKESLSRHE--NIVKAKKKEHGMLSRQLQQTEKELKSLEALLN 293
Query: 304 E 304
+
Sbjct: 294 Q 294
Score = 45 (20.9 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 10/44 (22%), Positives = 24/44 (54%)
Query: 391 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 434
+K ++EK L + + R+ ++ ++ N + L+N+G +N
Sbjct: 452 EKKQQEKTLVDE---IAKTKSRMSEVNEELNLIRSELQNAGIDN 492
Score = 43 (20.2 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 291 LDGDCKKLSSLINENSKRRMDFLEKVD 317
++ C LS I + +R F EK+D
Sbjct: 738 IESQCTMLSEGIRKRQQRIEGFQEKID 764
>UNIPROTKB|E2QUT0 [details] [associations]
symbol:KIF20B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR001752 InterPro:IPR019821
Pfam:PF00225 PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067
SMART:SM00129 GO:GO:0005524 GO:GO:0005875 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10
GeneTree:ENSGT00530000063172 OMA:KLGIKHQ EMBL:AAEX03015394
Ensembl:ENSCAFT00000011558 Uniprot:E2QUT0
Length = 1819
Score = 143 (55.4 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 65/272 (23%), Positives = 126/272 (46%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMEN-HINLRKRKLESIEKEDDINTALAKLVDQA 710
+DE + K +EI+ I + R +++ NL+ +SI+ D++ KL ++
Sbjct: 1172 KDECSHSAKLEQEILEKESIILKLERNLKDFQANLQ----DSIKNTKDLSEREVKLKEEI 1227
Query: 711 ADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFD-AKIRELEFNLKQHEKLAL 767
+ L N+Q K+++++K E W AEK + A I+ L+ +L++ E+
Sbjct: 1228 SQLTSNLQDAKHSLKLKE---EEKETSWHTAEKLKEELSASSALIQNLKADLQRKEEDYA 1284
Query: 768 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 827
+ D KK++E +K +S + + + + ELEK+ + I+ + IQ
Sbjct: 1285 ELKEKLADAKKQIEQVQKEVSVMRDEEKLLRIKVHELEKKKNQCSQEIDIKQRTIQQLKE 1344
Query: 828 QANSIFFLNQNI---LQEYEH-------RQRQIEDLST---KQEADKKELKRFLA----E 870
Q + NQN+ +Q+YE +++ IED+ +QE + E R L E
Sbjct: 1345 QLS-----NQNVEEAIQQYERVCKDLNVKEKIIEDMRMTLEEQEETQAEQDRVLEAKLEE 1399
Query: 871 IDALK---EKWLPTLRNLVAQINETFSRNFQE 899
+ L EKW ++L A+ N+ ++ ++
Sbjct: 1400 AEGLATELEKWKEKCKDLEAKSNQRSNKELED 1431
Score = 58 (25.5 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSD---RLKDMEDKNNKLL 424
H IE + + E+ +++K Q E E+ + + + L+ C D RLK +E++ NK
Sbjct: 1050 HSSIEAIWEECKEIVKGSSKKSHQIQELEQQIEKLQAELKGCMDENNRLK-IEERENKNK 1108
Query: 425 HALRNSGAENIFEAYCWLQQHRHELN 450
L EN+ + L+Q E N
Sbjct: 1109 GDLLKE-KENLIQQ---LKQELQEKN 1130
Score = 54 (24.1 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 202 RNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+NG+ ++ +E++K ++ +LL+ +E +KKKL
Sbjct: 547 QNGELTDEDLDKTLEEDKAFISYEEKRKLLDLIEDLKKKL 586
Score = 52 (23.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 17/83 (20%), Positives = 43/83 (51%)
Query: 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ 226
++E E+ + Q ++ C ++++++LK E K GD L + + L + +++++
Sbjct: 1074 IQELEQQIEKLQAELKGC--MDENNRLKIEERENKNKGDLLKEKENLIQQLKQELQEKNT 1131
Query: 227 RAEL-LEKVESMKKKLPWLKYDM 248
++ ++ V K+ L L D+
Sbjct: 1132 SLDVQVQHVVEGKRALSELTQDI 1154
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/75 (21%), Positives = 34/75 (45%)
Query: 367 PHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQ--NKLTLRQCSDRLKDMEDKNNKLL 424
P+ + E++ S+ L Q + +Q E + N L + + + +KD E + +
Sbjct: 206 PYQEKEEVASKSALLR-QIKEVVMQNDSYESLYGSLTNSLNIPESEESMKDCEQASLNMN 264
Query: 425 HALRNSGAENIFEAY 439
+ ++ S + FE Y
Sbjct: 265 NNIKFSVWVSFFEIY 279
Score = 44 (20.5 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 24/114 (21%), Positives = 44/114 (38%)
Query: 189 KSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV---RQRAELLEKVESMKKKLPWLK 245
K +KT E KR ++ L +L E EK +++ QR + L + K+ + +K
Sbjct: 727 KEELVKTQEELKKRQNESEINLNSLIQELEKSNKKIYTNNQRIQELIDINDQKEDI--IK 784
Query: 246 YDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLS 299
+ K N L ++ +E K +K D K+++
Sbjct: 785 FQNLKFHTENTFASTDEAGTSSLVKNNKLTS-NETVEVPKDDKTKTDLGRKRIN 837
Score = 43 (20.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 399 LNQNKLTLRQCSDRLKDMEDKNNKLLHA-LRNSGAENIFEAY 439
+N + LTL +C + LK+ E K+ H R S + F+++
Sbjct: 403 INTSLLTLGKCINVLKNSE-KSKFQQHVPFRESKLTHYFQSF 443
Score = 39 (18.8 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 381 LGVQANQKR--LQKSEKEKILNQNKLTLRQ------CSDRLKDMEDKNNKL 423
L ++ NQ + L K+++E + Q +L RQ + ++++E N K+
Sbjct: 712 LEIKFNQVKAELAKTKEELVKTQEELKKRQNESEINLNSLIQELEKSNKKI 762
>UNIPROTKB|F1P1D5 [details] [associations]
symbol:LOC429272 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016459 "myosin
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF01576 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00680000099788
EMBL:AADN02026141 EMBL:AADN02026142 EMBL:AADN02026143
IPI:IPI00586103 Ensembl:ENSGALT00000022380 ArrayExpress:F1P1D5
Uniprot:F1P1D5
Length = 1872
Score = 160 (61.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 68/296 (22%), Positives = 140/296 (47%)
Query: 644 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
+ ++R +EDE ++L+K+ +++ +++ ++EK K EN + ++ +++ T
Sbjct: 872 LAAKKRKLEDECSELKKDIDDLELSLAKVEKEKHAT-ENKVKNLTEEMAGLDENITKLTK 930
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-ELEFNLKQ 761
K++ ++ + + + N L + A+ +S+E + KIR +LE ++
Sbjct: 931 EKKILQESHQQALDDLQAEEDKVNTLAKAKVKLEQQADDLESSLEQEKKIRMDLERAKRK 990
Query: 762 HE---KLALQASLHYEDCKKEVEHCRK----HLSDAKRQAESIAFITPELEKEFLEMPTT 814
E KLA ++ + E+ K+++E K L+ + E I+ +L+K+ E+
Sbjct: 991 LEGDLKLAQESIMDLENDKQQLEERLKKKDFELNTLNARIEDEQAISAQLQKKLKELQAR 1050
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEADKKEL 864
IEELE ++ + + L +LQE E ++E+ L+ K+EA+ ++L
Sbjct: 1051 IEELEEELEAERTGRAKVEKLRSELLQELEETSERLEEAGGATSVQLELNKKREAEFQKL 1110
Query: 865 KRFLAEIDALKEKWLPTLR----NLVAQINETFSRNFQEMAVAGEVSLDEHESDFD 916
+R L E E TLR + VA+++E N Q + E E + + D
Sbjct: 1111 RRDLEEATLQHEATAATLRKKHADSVAELSEQLD-NLQRVKQKLEKEKSELKLELD 1165
Score = 55 (24.4 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 379 LELGVQANQKRLQKSEKE-KILNQNKLTL----RQCSDRLKDMEDKNNKL 423
L+L VQA Q L +E+ L +NK+ L ++ ++RL++ E+ N +L
Sbjct: 823 LQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMTERLEEEEEMNAEL 872
Score = 46 (21.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 20/92 (21%), Positives = 40/92 (43%)
Query: 164 VKLLEETEKAVGDPQLPVQ--HCALVEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKD 220
V +L+E D QL VQ L + + + I+ ++ + L E+E +
Sbjct: 814 VSMLQEKN----DLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMTERLEEEEEMN 869
Query: 221 VERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
E ++ +L ++ +KK + L+ + K E
Sbjct: 870 AELAAKKRKLEDECSELKKDIDDLELSLAKVE 901
Score = 39 (18.8 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 8/32 (25%), Positives = 22/32 (68%)
Query: 221 VERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
++ + + AE +++++MK++ LK ++K+E
Sbjct: 772 IKPLLKSAETEKEMQTMKEEFGHLKEALEKSE 803
>UNIPROTKB|F1NPB7 [details] [associations]
symbol:LOC429272 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016459 "myosin
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF01576 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0005634 GO:GO:0030018 GO:GO:0005925 GO:GO:0001725
GO:GO:0008307 GO:GO:0002027 GO:GO:0003774 GO:GO:0030898
GO:GO:0032982 GeneTree:ENSGT00680000099788 EMBL:AADN02026141
EMBL:AADN02026142 EMBL:AADN02026143 IPI:IPI00818026
Ensembl:ENSGALT00000040718 OMA:MVVRINN ArrayExpress:F1NPB7
Uniprot:F1NPB7
Length = 1942
Score = 160 (61.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 68/296 (22%), Positives = 140/296 (47%)
Query: 644 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
+ ++R +EDE ++L+K+ +++ +++ ++EK K EN + ++ +++ T
Sbjct: 942 LAAKKRKLEDECSELKKDIDDLELSLAKVEKEKHAT-ENKVKNLTEEMAGLDENITKLTK 1000
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-ELEFNLKQ 761
K++ ++ + + + N L + A+ +S+E + KIR +LE ++
Sbjct: 1001 EKKILQESHQQALDDLQAEEDKVNTLAKAKVKLEQQADDLESSLEQEKKIRMDLERAKRK 1060
Query: 762 HE---KLALQASLHYEDCKKEVEHCRK----HLSDAKRQAESIAFITPELEKEFLEMPTT 814
E KLA ++ + E+ K+++E K L+ + E I+ +L+K+ E+
Sbjct: 1061 LEGDLKLAQESIMDLENDKQQLEERLKKKDFELNTLNARIEDEQAISAQLQKKLKELQAR 1120
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEADKKEL 864
IEELE ++ + + L +LQE E ++E+ L+ K+EA+ ++L
Sbjct: 1121 IEELEEELEAERTGRAKVEKLRSELLQELEETSERLEEAGGATSVQLELNKKREAEFQKL 1180
Query: 865 KRFLAEIDALKEKWLPTLR----NLVAQINETFSRNFQEMAVAGEVSLDEHESDFD 916
+R L E E TLR + VA+++E N Q + E E + + D
Sbjct: 1181 RRDLEEATLQHEATAATLRKKHADSVAELSEQLD-NLQRVKQKLEKEKSELKLELD 1235
Score = 55 (24.4 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 379 LELGVQANQKRLQKSEKE-KILNQNKLTL----RQCSDRLKDMEDKNNKL 423
L+L VQA Q L +E+ L +NK+ L ++ ++RL++ E+ N +L
Sbjct: 893 LQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMTERLEEEEEMNAEL 942
Score = 46 (21.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 20/92 (21%), Positives = 40/92 (43%)
Query: 164 VKLLEETEKAVGDPQLPVQ--HCALVEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKD 220
V +L+E D QL VQ L + + + I+ ++ + L E+E +
Sbjct: 884 VSMLQEKN----DLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMTERLEEEEEMN 939
Query: 221 VERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
E ++ +L ++ +KK + L+ + K E
Sbjct: 940 AELAAKKRKLEDECSELKKDIDDLELSLAKVE 971
Score = 39 (18.8 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 8/32 (25%), Positives = 22/32 (68%)
Query: 221 VERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
++ + + AE +++++MK++ LK ++K+E
Sbjct: 842 IKPLLKSAETEKEMQTMKEEFGHLKEALEKSE 873
>UNIPROTKB|F1NQI1 [details] [associations]
symbol:Gga.55054 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR008636 Pfam:PF05622
GO:GO:0005737 GO:GO:0000226 GeneTree:ENSGT00690000101702
EMBL:AADN02003644 EMBL:AADN02003645 EMBL:AADN02003646
EMBL:AADN02003647 EMBL:AADN02003648 IPI:IPI00598554
Ensembl:ENSGALT00000017438 ArrayExpress:F1NQI1 Uniprot:F1NQI1
Length = 1597
Score = 130 (50.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 55/242 (22%), Positives = 107/242 (44%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIIN-IVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
+ TE++L++++ L+ + N I+ ++K+ E++ L+ + + + +++
Sbjct: 979 LHTEKQLLKEQLKHLETQNVSFNNQILTLQKQNMFLQEHNTALQTQTAKLQVENSTLSSQ 1038
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE-----KHMASIEFDAKIRELEF 757
A L+ Q A L QQ E +NLL + K Y +H+AS+ + + E E
Sbjct: 1039 SASLMAQNALLQNQQTAKENENENLLKQKEQLKAEYESLLQDHEHLASLH-EHQSTEYEL 1097
Query: 758 NLKQHEKL-ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 816
+ QH L L +L E K + L K + + + + + E+E L+
Sbjct: 1098 LINQHSCLKTLHKNLDLEH--KGLGERYNSLMKQKAELDELE-LALKTEREVLQEERRSN 1154
Query: 817 ELEAAIQDNI-SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
+ A + + + + FL+ + EYE ++L T + EL R+ A D LK
Sbjct: 1155 AITAGENQKLREELDRVNFLHSQLKAEYEGLHSHTKELKTSLNNSQLELNRWQARYDELK 1214
Query: 876 EK 877
E+
Sbjct: 1215 EQ 1216
Score = 68 (29.0 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 29/130 (22%), Positives = 58/130 (44%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
L E++ +L+ + T++ + Q++A N + E++ E +R+ E+L KV S K + L
Sbjct: 612 LDEENLELRKVVETMRFTSTKMAQIEAENKDLEREKEDLRKNVEML-KVLSKKSERLELS 670
Query: 246 YDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINEN 305
Y +E + E K ++ + E +L + ++L
Sbjct: 671 YQSINSE-------NQRLQQMLENSNKKIQELEKEVQATESENQVLQRNLEELKI----- 718
Query: 306 SKRRMDFLEK 315
S +R++ LEK
Sbjct: 719 SAKRLERLEK 728
Score = 66 (28.3 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 16/55 (29%), Positives = 34/55 (61%)
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+EK +K+ + TV +N+L+ + +KD ++V+++ +E+VE M+K+L
Sbjct: 498 IEKENKI--LHETVTETSSKVNKLEFEKKQLQKDFDQVKEK---VERVEEMEKEL 547
Score = 58 (25.5 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 181 VQHCALVEKSSKLKTIECTVKRNGDTLNQLKAL--NVEQ-EKDVERV-RQRAELLEKVES 236
+ H + E SSK+ +E K+ +Q+K VE+ EK++ R+ ++ +L +K +
Sbjct: 504 ILHETVTETSSKVNKLEFEKKQLQKDFDQVKEKVERVEEMEKELHRLEKENEQLTKKATA 563
Query: 237 MK 238
MK
Sbjct: 564 MK 565
Score = 57 (25.1 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 363 AYEPPHDKIEKLGSQILELG---VQANQKRLQKSEKE-KILNQNKLTLRQCSDRLKDMED 418
+Y+ + + ++L Q+LE +Q +K +Q +E E ++L +N L+ + RL+ +E
Sbjct: 670 SYQSINSENQRL-QQMLENSNKKIQELEKEVQATESENQVLQRNLEELKISAKRLERLE- 727
Query: 419 KNNKLL 424
K NK L
Sbjct: 728 KENKAL 733
Score = 57 (25.1 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 23/88 (26%), Positives = 49/88 (55%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKDVER 223
++LE + K + + + VQ A ++ L + +E +K + L +L+ N E+++ +
Sbjct: 683 QMLENSNKKIQELEKEVQ--ATESENQVLQRNLE-ELKISAKRLERLEKENKALEQEISQ 739
Query: 224 VRQRAELLEKVESMKKKLPWLKYDMKKA 251
+ + +LLEK E+ K+L W + ++K A
Sbjct: 740 LEKDKKLLEK-ET--KRL-WQQVELKDA 763
Score = 52 (23.4 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKK 250
QL N+E K VE +R + + ++E+ K L K D++K
Sbjct: 611 QLDEENLELRKVVETMRFTSTKMAQIEAENKDLEREKEDLRK 652
Score = 50 (22.7 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 389 RLQKSEKE-KILNQNKLTLRQCSDRLKDMEDKNNKLL 424
+L +EKE K L + R S++LK+ E N L+
Sbjct: 771 KLAVAEKENKTLEKEIAQFRDSSNKLKEFEKDNKDLI 807
Score = 49 (22.3 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 31/126 (24%), Positives = 60/126 (47%)
Query: 111 KIDTRNKSEWFFNGKVVPK-GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEE 169
K D R E KV+ K E LE++ + +N+ Q L Q + E + +L +E
Sbjct: 647 KEDLRKNVEML---KVLSKKSERLELSYQ---SINSENQRLQQ--MLENSNKKIQELEKE 698
Query: 170 TEKAVGDPQLPVQHCALVEKSSK-LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRA 228
+ + Q+ ++ ++ S+K L+ +E K ++QL+ EK+ +R+ Q+
Sbjct: 699 VQATESENQVLQRNLEELKISAKRLERLEKENKALEQEISQLEKDKKLLEKETKRLWQQV 758
Query: 229 ELLEKV 234
EL + +
Sbjct: 759 ELKDAI 764
Score = 44 (20.5 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 388 KRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 434
K Q + K L + K LR+ + LK + K+ +L + ++ +EN
Sbjct: 632 KMAQIEAENKDLEREKEDLRKNVEMLKVLSKKSERLELSYQSINSEN 678
Score = 41 (19.5 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 13/67 (19%), Positives = 30/67 (44%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
L EKS +L + V++ L ++K N+ D R + L+ + ++ L+
Sbjct: 181 LEEKSEQLVDSKHEVEQLTLELQKIKQENIHLASDARSARAYRDELDSLREKANRVERLE 240
Query: 246 YDMKKAE 252
++ + +
Sbjct: 241 MELVRCK 247
Score = 40 (19.1 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 19/89 (21%), Positives = 42/89 (47%)
Query: 157 EFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE 216
E +LS L +T K+ + CA SS++ +E + +T+ +L+ ++
Sbjct: 346 ELEQLSKSTDLADTRKSF---VFELNECA----SSRILKLEKDNQSLQNTIQELRDASLT 398
Query: 217 QE----KDVERVRQRAELLEKVESMKKKL 241
K VE ++ +L +K+E ++ ++
Sbjct: 399 SRESSLKFVELEKENQQLSKKIEKLQNQI 427
Score = 37 (18.1 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 393 SEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKE 452
S+K + L + ++ + RL+ M + +NK + L E LQ++ EL
Sbjct: 661 SKKSERLELSYQSINSENQRLQQMLENSNKKIQELEKEVQATESENQV-LQRNLEELKIS 719
Query: 453 A 453
A
Sbjct: 720 A 720
>UNIPROTKB|F1NWN3 [details] [associations]
symbol:MYH11 "Myosin-11" species:9031 "Gallus gallus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016459 "myosin complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 EMBL:AADN02023593
GeneTree:ENSGT00650000092896 EMBL:AADN02023591 EMBL:AADN02023592
IPI:IPI00591959 Ensembl:ENSGALT00000010535 Uniprot:F1NWN3
Length = 1951
Score = 138 (53.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 65/275 (23%), Positives = 124/275 (45%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLE----SIEKE-DD 698
+Q E++ +L K+ E ++ ++RK+R + K+KLE +E + D
Sbjct: 1567 LQARDEQNEEKRRQLLKQLHEHETELE-DERKQRALAA---AAKKKLEVDVKDLESQVDS 1622
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
N A + + Q L Q Y ++ + + E + +A++ +L+ +
Sbjct: 1623 ANKAREEAIKQLRKLQAQMKDYQRDLDDARAAREEIFATARENEKKAKNLEAELIQLQED 1682
Query: 759 LKQHEKLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTT 814
L E+ QA L E+ +E+ R L D KR+ E+ IA + EL++E + T
Sbjct: 1683 LAAAERARKQADLEKEEMAEELASANSGRTSLQDEKRRLEARIAQLEEELDEEHSNIETM 1742
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-A 873
+ + A+Q Q N+ + Q+ E+ ++Q+E +Q KEL+ L E++ A
Sbjct: 1743 SDRMRKAVQQ-AEQLNNELATERATAQKNENARQQLE----RQN---KELRSKLQEMEGA 1794
Query: 874 LKEKWLPTLRNL---VAQINETFSRNFQEMAVAGE 905
+K K+ T+ L +A + E + +E A +
Sbjct: 1795 VKSKFKSTIAALEAKIASLEEQLEQEAREKQAAAK 1829
Score = 132 (51.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 67/289 (23%), Positives = 135/289 (46%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREM--ENHINLRKRKLESIEKEDDINTA 702
+ E RL ++E K ++E E+I ++ E E E + + K + +KE+++ A
Sbjct: 1025 ELEVRLKKEE--KSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAA 1082
Query: 703 LAKLVDQAADLN--IQQFK-YAIEIKNLLVEIVSCKWSY--AEKHMASI--EFDAKIREL 755
LA+L D+ + N +++ + I +L ++ S K + AEK + E +A EL
Sbjct: 1083 LARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTEL 1142
Query: 756 EFNLKQ---HEKLALQASLHYEDCKKEVEH-CRKHLSDAK--RQ--AESIAFITPELEKE 807
E L ++L + K+ +E R H + + RQ +++ +T +LE +
Sbjct: 1143 EDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAVEELTEQLE-Q 1201
Query: 808 FLEMPTTIEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
F +++ + ++ DN AN I L+Q Q+ EH+++++E ++ + +R
Sbjct: 1202 FKRAKANLDKTKQTLEKDNADLANEIRSLSQ-AKQDVEHKKKKLEVQLQDLQSKYSDGER 1260
Query: 867 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQ---EMAVAGEVSLDEHE 912
E++ K + N+ + +NE S+N + ++A G D E
Sbjct: 1261 VRTELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQE 1309
Score = 125 (49.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 73/316 (23%), Positives = 143/316 (45%)
Query: 644 MQTEQRLIEDEAAKLQKER---EEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDIN 700
M+ + ++ED+ KL KER EE ++ + + E ++ K K ES+ E ++
Sbjct: 970 MEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVR 1029
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
L K ++ + +++ K +E ++ ++ H E A+I EL+ L
Sbjct: 1030 --LKK--EEKSRQELEKIKRKLEGES------------SDLHEQIAELQAQIAELKAQLA 1073
Query: 761 QHEKLALQASL-HYED-------CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP 812
+ E+ LQA+L ED K++ H+SD + ES + EK+ ++
Sbjct: 1074 KKEE-ELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLS 1132
Query: 813 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELK-RFLAEI 871
+E L+ ++D + + L QE +R +E+ + EA +E++ + +
Sbjct: 1133 EELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAV 1192
Query: 872 DALKEKWLPTLRNLVAQINETFSRNFQEMA-VAGEV-SLDEHESDFDKFGILIKVKFRQS 929
+ L E+ L + A +++T ++ A +A E+ SL + + D + K K +
Sbjct: 1193 EELTEQ-LEQFKRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEH-----KKK-KLE 1245
Query: 930 GQLEVLSAHHQSGGER 945
QL+ L + + S GER
Sbjct: 1246 VQLQDLQSKY-SDGER 1260
Score = 68 (29.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 372 EKLGSQILELGVQANQKRL--QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
+K+ Q+L+L Q ++ QK + EK+ K+ ++ D + MED+NNKL
Sbjct: 933 KKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKI--KKMEDDILIMEDQNNKL 984
Score = 66 (28.3 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 54/292 (18%), Positives = 110/292 (37%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK---DVERVRQRAE-----LLEKVESM 237
L E+ K K + ++ +++L+ ++EK ++E+++++ E L E++ +
Sbjct: 1002 LAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAEL 1061
Query: 238 KKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKK 297
+ ++ LK + K E N L K I + + L D +
Sbjct: 1062 QAQIAELKAQLAKKEE-ELQAALARLEDETSQKNNAL----KKIRELESHISDLQEDLES 1116
Query: 298 LSSLINENSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXX--XILKARXXXXXXX 355
+ N+ K++ D E+++ +LK
Sbjct: 1117 EKAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRT 1176
Query: 356 XXXQTVPAYEPPHDKIEKLGSQILELG-VQAN-QKRLQKSEKEKILNQNKLTLRQCSDRL 413
Q + +E+L Q+ + +AN K Q EK+ N++ R S
Sbjct: 1177 HEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEI--RSLSQAK 1234
Query: 414 KDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 465
+D+E K KL L +++ Y ++ R ELN++ + L++ V N
Sbjct: 1235 QDVEHKKKKLEVQL-----QDLQSKYSDGERVRTELNEKVHK---LQIEVEN 1278
Score = 53 (23.7 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
Identities = 43/179 (24%), Positives = 72/179 (40%)
Query: 77 ATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEIT 136
AT KR +E +K +L +T+ + + R K V E LE
Sbjct: 1150 ATQQELRAKREQEVTVLKRALEEETRTHEAQVQ---EMRQKH----TQAVEELTEQLEQF 1202
Query: 137 KRFNIQVNNLTQFLPQDRVC---EFAKLSPVKLLEETEKAVGDPQLP-VQ------HCAL 186
KR ++ Q L +D E LS K E +K + QL +Q
Sbjct: 1203 KRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEHKKKKLEVQLQDLQSKYSDGERVR 1262
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDV----ERVRQRAELLEKVESMKKKL 241
E + K+ ++ V+ LN+ ++ N++ KDV +++ ELL+ E ++KL
Sbjct: 1263 TELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQELLQ--EETRQKL 1319
Score = 49 (22.3 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
Identities = 17/71 (23%), Positives = 31/71 (43%)
Query: 395 KEKILNQNKLTLRQCSDRLKDMED--KNNKLLHALRNSGAENIFEAYCWLQQHRHELNKE 452
KE++ NK+ + D + +D KN L + + + + E L++ EL
Sbjct: 1486 KEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQAA 1545
Query: 453 AYGPVLLEVNV 463
+ LEVN+
Sbjct: 1546 EDAKLRLEVNM 1556
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 368 HDKIEKLGSQILELGVQ-ANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
H K +KL Q+ +L + ++ +R++ EK+ ++ ++ + + L + E KN KL
Sbjct: 1239 HKK-KKLEVQLQDLQSKYSDGERVRTELNEKV-HKLQIEVENVTSLLNEAESKNIKLTKD 1296
Query: 427 LRNSGAENIFEAYCWLQQH-RHELN 450
+ G++ + + LQ+ R +LN
Sbjct: 1297 VATLGSQ-LQDTQELLQEETRQKLN 1320
Score = 45 (20.9 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 26/113 (23%), Positives = 49/113 (43%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP-VKLLEETEKAVGDPQLPVQHCALVEK 189
E+L+ R + V + L D+ +L V+ + E+ + L +Q L +
Sbjct: 1309 ELLQEETRQKLNVTTKLRQLEDDKNSLQEQLDEEVEAKQNLERHIST--LTIQ---LSDS 1363
Query: 190 SSKLKTIECTVKRNGDTLNQ-LKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
KL+ TV +T+ + K L E E ++ ++A +K+E K +L
Sbjct: 1364 KKKLQEFTATV----ETMEEGKKKLQREIESLTQQFEEKAASYDKLEKTKNRL 1412
Score = 44 (20.5 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 390 LQKSEKEKILNQNKLTLRQCSDRLKDM--EDKNNKLLHALRNSGAENIFEAYCWLQQH-- 445
+ + + K+ + KL + SD ++ E++ K L L+N I E L++
Sbjct: 976 IMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEK 1035
Query: 446 -RHELNK 451
R EL K
Sbjct: 1036 SRQELEK 1042
Score = 43 (20.2 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 43/205 (20%), Positives = 72/205 (35%)
Query: 209 QLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL---PWLKYDMKKAE---YIXXXXXXX 261
+++A + E ++ ER +Q+AE L+++E +L L + +AE Y
Sbjct: 840 EMQAKDEELQRTKER-QQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRV 898
Query: 262 XXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL---INENSKRRMDFLEKVDX 318
LHE IE +++ L + KK+ + E + +K+
Sbjct: 899 RLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQL 958
Query: 319 XXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK-IEKLG-- 375
K K + K R T A E K + KL
Sbjct: 959 EKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNK 1018
Query: 376 --SQILELGVQANQKRLQKSEKEKI 398
S I EL V+ ++ + E EKI
Sbjct: 1019 HESMISELEVRLKKEEKSRQELEKI 1043
Score = 43 (20.2 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 9/41 (21%), Positives = 22/41 (53%)
Query: 383 VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
+Q ++ + K++ L + K ++ LK++E K+ +L
Sbjct: 832 LQVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQL 872
>ZFIN|ZDB-GENE-030131-8984 [details] [associations]
symbol:pleca "plectin a" species:7955 "Danio
rerio" [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] InterPro:IPR001101 InterPro:IPR001452
InterPro:IPR001589 InterPro:IPR001715 Pfam:PF00307 Pfam:PF00681
PROSITE:PS00019 PROSITE:PS00020 PROSITE:PS50021 SMART:SM00033
SMART:SM00250 SMART:SM00326 ZFIN:ZDB-GENE-030131-8984 GO:GO:0005856
Gene3D:1.10.418.10 InterPro:IPR018159 SMART:SM00150 SUPFAM:SSF47576
GeneTree:ENSGT00700000104214 EMBL:BX957242 EMBL:CR855260
IPI:IPI00972187 Ensembl:ENSDART00000090669 ArrayExpress:E7F8G7
Bgee:E7F8G7 Uniprot:E7F8G7
Length = 4762
Score = 132 (51.5 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 60/227 (26%), Positives = 108/227 (47%)
Query: 648 QRLIEDEAAKLQKEREEI--INIVQIEKRKRREMENHINLRKRKL-ESI--EKEDDINTA 702
++L+E+EA ++K EE +NI E + R++ ++R+L E + EK+ I A
Sbjct: 2448 KKLLEEEAENMKKLAEEAARLNIEAQEAARLRQIAESDLAKQRELAEKMLEEKKQAIQEA 2507
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLV---EIVSCKWSYAEKHMASIEFDAKIRELEFNL 759
AKL +A L Q+ + +E + LL E+ E S+E + K R+LE
Sbjct: 2508 -AKLKAEAEKLQKQKDQAQVEAQKLLEAKKEMQQRLDQETEGFQKSLEAERK-RQLEITA 2565
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
+ EKL ++ + D + + E K K+QA+ I E EK E T +E+LE
Sbjct: 2566 EA-EKLKVKVT-QLSDAQSKAEEEAKKF---KKQADEIKIRLQETEKHTSEKHTVVEKLE 2620
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
+ +A+ + ++ +E E +++ DL KQ + +++
Sbjct: 2621 VQRLQSKQEADGLHKAIADLEKEKEKLKKEAADLQ-KQSKEMANVQQ 2666
Score = 119 (46.9 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 53/244 (21%), Positives = 110/244 (45%)
Query: 647 EQRLIEDEAAKLQKERE----EIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINT 701
E ++ EA KLQK+++ E +++ +K ++ ++ ++ LE+ K +I
Sbjct: 2506 EAAKLKAEAEKLQKQKDQAQVEAQKLLEAKKEMQQRLDQETEGFQKSLEAERKRQLEITA 2565
Query: 702 ALAKLVDQAADLNIQQFKYAIEIKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNL 759
KL + L+ Q K E K + + + EKH + E + +LE
Sbjct: 2566 EAEKLKVKVTQLSDAQSKAEEEAKKFKKQADEIKIRLQETEKHTS--EKHTVVEKLEVQR 2623
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI--EE 817
Q ++ A D +KE E +K +D ++Q++ +A +++E L+ TI +
Sbjct: 2624 LQSKQEADGLHKAIADLEKEKEKLKKEAADLQKQSKEMA----NVQQEQLQQEKTILQQS 2679
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK----ELKRFLAEIDA 873
A + + + +I + + +++E ++ E L +QE +K E K+ + +DA
Sbjct: 2680 FFAEKETLLKKEKAIEEEKKKLEKQFEDEVKKAEALKAEQERQRKLMEEERKKLQSAMDA 2739
Query: 874 LKEK 877
+K
Sbjct: 2740 AIKK 2743
Score = 118 (46.6 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 79/363 (21%), Positives = 167/363 (46%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL- 706
Q+ I +E K +K EE I+I+++ K + + L +KL+ I E + A A+
Sbjct: 2103 QKKIVEETLKQRKVVEEEIHILKLNFEKASSGKQELELELKKLKGIADETQKSKAKAEEE 2162
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 766
++ L +++ K E + + +I + + A +H A+ E ++ +L K+ +++A
Sbjct: 2163 AEKFRKLALEEEKKRKEAEAKVKQIQAAEEEAARQHKAAQEEVGRLMKLAEEAKKQKEIA 2222
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESI-------AFITPELEKEFLEMPTTIEELE 819
+ + E V+ + S A+++A+++ + +L++EF + +E E
Sbjct: 2223 EKEA---EKQVILVQEAAQKCSAAEQKAQNVLVQQNKDSMAQDKLKEEFEKAKKLAQEAE 2279
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQ------------EADKKELKRF 867
A +DN + ++ L++ +E E +++ E + KQ EA+K+ +R
Sbjct: 2280 KA-KDNAEKEAAL--LHKKA-EEAERQKKAAEAEAAKQAKAQEDAEKLRKEAEKEASRRA 2335
Query: 868 LAEIDALKEKWLPTLRNLVAQINETFSRNF-QEMAVAGE-VSLDEHESDFDKFGILIKVK 925
AE ALK K + +A+ + + Q+ +V E V + + DK ++ V+
Sbjct: 2336 EAEAAALKLK--QEADSEMAKYKKLAEKTLKQKSSVEEELVKVKVQLDETDKQKSVLDVE 2393
Query: 926 FRQSGQLEVLSAHHQSGG-ERSVSTILYLVSLQDLTNCPFRVVDEINQGM--DPINERKM 982
++ Q EV A Q E +S + + ++DL ++ E + M D N +K+
Sbjct: 2394 LKRLKQ-EVSDAIKQKAQVEDELSKVK--IQMEDLLKLKLKIEKENQELMKKDKDNTKKL 2450
Query: 983 FQQ 985
++
Sbjct: 2451 LEE 2453
Score = 80 (33.2 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 40/176 (22%), Positives = 82/176 (46%)
Query: 70 DTQLLG-RATSIGAYVKRG---EESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGK 125
+T+LL RA ++ A R EE+ ++ + +T+++ + + + KSE
Sbjct: 1669 ETELLQLRAKAVDADKLRNAAQEEAEKLRKQVAEETQKKRKA---EEELKRKSE-AEKDA 1724
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
K + LE ++F +Q + L Q E K ++++EE K QL + A
Sbjct: 1725 AKEKKKALEDLEKFKLQAEEAERHLKQ---AELEKQRQIQVVEEVAKKTAATQLESKQVA 1781
Query: 186 LVEK-SSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKK 240
L + LK + V + + LK +Q+ + ++ R++AE +++E+ ++K
Sbjct: 1782 LTARLEESLKNEQVMVIQLQEEAEHLK----KQQAEADKAREQAE--KELETWRQK 1831
Score = 73 (30.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 42/186 (22%), Positives = 74/186 (39%)
Query: 137 KRFNIQVNNLTQFLPQDRVCE-FAKLSPVKLLEETEKAV--GDPQLPVQHCALVEKSSKL 193
K N+ V + QD++ E F K KL +E EKA + + + H E +
Sbjct: 2246 KAQNVLVQQNKDSMAQDKLKEEFEKAK--KLAQEAEKAKDNAEKEAALLHKKAEEAERQK 2303
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
K E + + L E EK+ R RAE + ++K K + D + A+Y
Sbjct: 2304 KAAEAEAAKQAKAQEDAEKLRKEAEKEASR---RAEA--EAAALKLKQ---EADSEMAKY 2355
Query: 254 IXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRM--- 310
L + ++ ++K++LD + K+L +++ K++
Sbjct: 2356 ---KKLAEKTLKQKSSVEEELVKVKVQLDETDKQKSVLDVELKRLKQEVSDAIKQKAQVE 2412
Query: 311 DFLEKV 316
D L KV
Sbjct: 2413 DELSKV 2418
Score = 55 (24.4 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 44/251 (17%), Positives = 85/251 (33%)
Query: 208 NQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXX 267
N+ A E EK E ++ A+ K E K + + + E
Sbjct: 1847 NKKTAAQEEAEKQKEEAKREAKKRAKAEEAALK----QKEAAEMELGNQRKMAEETAKQK 1902
Query: 268 XXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLE---KVDXXXXXXX 324
L E +Q++ +LD + ++L + +N K++ + E KV
Sbjct: 1903 LAAEQELIRLRADFEHAEQQRTVLDDELQRLKNDVNSAVKQKKELEEELIKVRKEMEILL 1962
Query: 325 XKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQ 384
+ +L++ T K ++ QI E
Sbjct: 1963 QQKSKAEKETMSNTEKSKQLLESEAAKMRELAEEATKLRSVAEEAKKQR---QIAEEEAA 2019
Query: 385 ANQKRLQKSEKEKILNQNKLT-LR-QCSDRLKDMEDKNNKLLHALRNSGAEN-IFEAYCW 441
+ +K KEK+ N+ T L+ + LK+ E +N++L G + + E
Sbjct: 2020 RQRAEAEKILKEKLTAINEATRLKTEAEIALKEKEAENDRLKRKAEEEGYQRKVLEDQA- 2078
Query: 442 LQQHRHELNKE 452
QH+ + ++
Sbjct: 2079 -AQHKQAIEEK 2088
Score = 52 (23.4 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 75/400 (18%), Positives = 146/400 (36%)
Query: 187 VEKSSKLKT-IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
+ ++++LKT E +K ++LK E+E +V + K +++++K+ LK
Sbjct: 2036 INEATRLKTEAEIALKEKEAENDRLKR-KAEEEGYQRKVLEDQAAQHK-QAIEEKIGQLK 2093
Query: 246 YDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINEN 305
E +H E K L+ + KKL + +E
Sbjct: 2094 KS-SDTELDRQKKIVEETLKQRKVVEEEIHILKLNFEKASSGKQELELELKKLKGIADET 2152
Query: 306 SKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKA-RXXXXXXXXXXQTVP-A 363
K + E+ + + K +A R + + A
Sbjct: 2153 QKSKAKAEEEAEKFRKLALEEEKKRKEAEAKVKQIQAAEEEAARQHKAAQEEVGRLMKLA 2212
Query: 364 YEPPHDK--IEKLGSQILELGVQANQKRLQKSEKEK--ILNQNKLTLRQCSDRLKDMEDK 419
E K EK + + L +A QK +K + ++ QNK ++ Q D+LK+ +K
Sbjct: 2213 EEAKKQKEIAEKEAEKQVILVQEAAQKCSAAEQKAQNVLVQQNKDSMAQ--DKLKEEFEK 2270
Query: 420 NNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHY 479
KL + +N + L + E ++ E + +A A + +
Sbjct: 2271 AKKLAQEAEKA-KDNAEKEAALLHKKAEEAERQKKAA---EAEAAKQAKAQEDAEKLRKE 2326
Query: 480 IWKSFITQDAGDRDFLAKNLKP-FDVPILNYVS-NESSRKEPFQISEEMRALGISARLDQ 537
K + + A LK D + Y E + K+ + EE+ + + +LD+
Sbjct: 2327 AEKE--ASRRAEAEAAALKLKQEADSEMAKYKKLAEKTLKQKSSVEEEL--VKVKVQLDE 2382
Query: 538 VFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAKLGI 577
D +V +V + + + S K+ Q D ++K+ I
Sbjct: 2383 T-DKQKSVLDVELKRLKQEVSD-AIKQKAQVEDELSKVKI 2420
>UNIPROTKB|G1K307 [details] [associations]
symbol:MYH11 "Myosin-11" species:9031 "Gallus gallus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016459 "myosin complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 EMBL:AADN02023593
GeneTree:ENSGT00650000092896 EMBL:AADN02023591 EMBL:AADN02023592
Ensembl:ENSGALT00000010533 Uniprot:G1K307
Length = 1972
Score = 138 (53.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 65/275 (23%), Positives = 124/275 (45%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLE----SIEKE-DD 698
+Q E++ +L K+ E ++ ++RK+R + K+KLE +E + D
Sbjct: 1579 LQARDEQNEEKRRQLLKQLHEHETELE-DERKQRALAA---AAKKKLEVDVKDLESQVDS 1634
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
N A + + Q L Q Y ++ + + E + +A++ +L+ +
Sbjct: 1635 ANKAREEAIKQLRKLQAQMKDYQRDLDDARAAREEIFATARENEKKAKNLEAELIQLQED 1694
Query: 759 LKQHEKLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTT 814
L E+ QA L E+ +E+ R L D KR+ E+ IA + EL++E + T
Sbjct: 1695 LAAAERARKQADLEKEEMAEELASANSGRTSLQDEKRRLEARIAQLEEELDEEHSNIETM 1754
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-A 873
+ + A+Q Q N+ + Q+ E+ ++Q+E +Q KEL+ L E++ A
Sbjct: 1755 SDRMRKAVQQ-AEQLNNELATERATAQKNENARQQLE----RQN---KELRSKLQEMEGA 1806
Query: 874 LKEKWLPTLRNL---VAQINETFSRNFQEMAVAGE 905
+K K+ T+ L +A + E + +E A +
Sbjct: 1807 VKSKFKSTIAALEAKIASLEEQLEQEAREKQAAAK 1841
Score = 132 (51.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 67/289 (23%), Positives = 135/289 (46%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREM--ENHINLRKRKLESIEKEDDINTA 702
+ E RL ++E K ++E E+I ++ E E E + + K + +KE+++ A
Sbjct: 1037 ELEVRLKKEE--KSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAA 1094
Query: 703 LAKLVDQAADLN--IQQFK-YAIEIKNLLVEIVSCKWSY--AEKHMASI--EFDAKIREL 755
LA+L D+ + N +++ + I +L ++ S K + AEK + E +A EL
Sbjct: 1095 LARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTEL 1154
Query: 756 EFNLKQ---HEKLALQASLHYEDCKKEVEH-CRKHLSDAK--RQ--AESIAFITPELEKE 807
E L ++L + K+ +E R H + + RQ +++ +T +LE +
Sbjct: 1155 EDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAVEELTEQLE-Q 1213
Query: 808 FLEMPTTIEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
F +++ + ++ DN AN I L+Q Q+ EH+++++E ++ + +R
Sbjct: 1214 FKRAKANLDKTKQTLEKDNADLANEIRSLSQ-AKQDVEHKKKKLEVQLQDLQSKYSDGER 1272
Query: 867 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQ---EMAVAGEVSLDEHE 912
E++ K + N+ + +NE S+N + ++A G D E
Sbjct: 1273 VRTELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQE 1321
Score = 125 (49.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 73/316 (23%), Positives = 143/316 (45%)
Query: 644 MQTEQRLIEDEAAKLQKER---EEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDIN 700
M+ + ++ED+ KL KER EE ++ + + E ++ K K ES+ E ++
Sbjct: 982 MEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVR 1041
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
L K ++ + +++ K +E ++ ++ H E A+I EL+ L
Sbjct: 1042 --LKK--EEKSRQELEKIKRKLEGES------------SDLHEQIAELQAQIAELKAQLA 1085
Query: 761 QHEKLALQASL-HYED-------CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP 812
+ E+ LQA+L ED K++ H+SD + ES + EK+ ++
Sbjct: 1086 KKEE-ELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLS 1144
Query: 813 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELK-RFLAEI 871
+E L+ ++D + + L QE +R +E+ + EA +E++ + +
Sbjct: 1145 EELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAV 1204
Query: 872 DALKEKWLPTLRNLVAQINETFSRNFQEMA-VAGEV-SLDEHESDFDKFGILIKVKFRQS 929
+ L E+ L + A +++T ++ A +A E+ SL + + D + K K +
Sbjct: 1205 EELTEQ-LEQFKRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEH-----KKK-KLE 1257
Query: 930 GQLEVLSAHHQSGGER 945
QL+ L + + S GER
Sbjct: 1258 VQLQDLQSKY-SDGER 1272
Score = 68 (29.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 372 EKLGSQILELGVQANQKRL--QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
+K+ Q+L+L Q ++ QK + EK+ K+ ++ D + MED+NNKL
Sbjct: 945 KKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKI--KKMEDDILIMEDQNNKL 996
Score = 66 (28.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 54/292 (18%), Positives = 110/292 (37%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK---DVERVRQRAE-----LLEKVESM 237
L E+ K K + ++ +++L+ ++EK ++E+++++ E L E++ +
Sbjct: 1014 LAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAEL 1073
Query: 238 KKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKK 297
+ ++ LK + K E N L K I + + L D +
Sbjct: 1074 QAQIAELKAQLAKKEE-ELQAALARLEDETSQKNNAL----KKIRELESHISDLQEDLES 1128
Query: 298 LSSLINENSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXX--XILKARXXXXXXX 355
+ N+ K++ D E+++ +LK
Sbjct: 1129 EKAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRT 1188
Query: 356 XXXQTVPAYEPPHDKIEKLGSQILELG-VQAN-QKRLQKSEKEKILNQNKLTLRQCSDRL 413
Q + +E+L Q+ + +AN K Q EK+ N++ R S
Sbjct: 1189 HEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEI--RSLSQAK 1246
Query: 414 KDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 465
+D+E K KL L +++ Y ++ R ELN++ + L++ V N
Sbjct: 1247 QDVEHKKKKLEVQL-----QDLQSKYSDGERVRTELNEKVHK---LQIEVEN 1290
Score = 53 (23.7 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 43/179 (24%), Positives = 72/179 (40%)
Query: 77 ATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEIT 136
AT KR +E +K +L +T+ + + R K V E LE
Sbjct: 1162 ATQQELRAKREQEVTVLKRALEEETRTHEAQVQ---EMRQKH----TQAVEELTEQLEQF 1214
Query: 137 KRFNIQVNNLTQFLPQDRVC---EFAKLSPVKLLEETEKAVGDPQLP-VQ------HCAL 186
KR ++ Q L +D E LS K E +K + QL +Q
Sbjct: 1215 KRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEHKKKKLEVQLQDLQSKYSDGERVR 1274
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDV----ERVRQRAELLEKVESMKKKL 241
E + K+ ++ V+ LN+ ++ N++ KDV +++ ELL+ E ++KL
Sbjct: 1275 TELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQELLQ--EETRQKL 1331
Score = 49 (22.3 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 17/71 (23%), Positives = 31/71 (43%)
Query: 395 KEKILNQNKLTLRQCSDRLKDMED--KNNKLLHALRNSGAENIFEAYCWLQQHRHELNKE 452
KE++ NK+ + D + +D KN L + + + + E L++ EL
Sbjct: 1498 KEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQAA 1557
Query: 453 AYGPVLLEVNV 463
+ LEVN+
Sbjct: 1558 EDAKLRLEVNM 1568
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 368 HDKIEKLGSQILELGVQ-ANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
H K +KL Q+ +L + ++ +R++ EK+ ++ ++ + + L + E KN KL
Sbjct: 1251 HKK-KKLEVQLQDLQSKYSDGERVRTELNEKV-HKLQIEVENVTSLLNEAESKNIKLTKD 1308
Query: 427 LRNSGAENIFEAYCWLQQH-RHELN 450
+ G++ + + LQ+ R +LN
Sbjct: 1309 VATLGSQ-LQDTQELLQEETRQKLN 1332
Score = 45 (20.9 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 26/113 (23%), Positives = 49/113 (43%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP-VKLLEETEKAVGDPQLPVQHCALVEK 189
E+L+ R + V + L D+ +L V+ + E+ + L +Q L +
Sbjct: 1321 ELLQEETRQKLNVTTKLRQLEDDKNSLQEQLDEEVEAKQNLERHIST--LTIQ---LSDS 1375
Query: 190 SSKLKTIECTVKRNGDTLNQ-LKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
KL+ TV +T+ + K L E E ++ ++A +K+E K +L
Sbjct: 1376 KKKLQEFTATV----ETMEEGKKKLQREIESLTQQFEEKAASYDKLEKTKNRL 1424
Score = 44 (20.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 390 LQKSEKEKILNQNKLTLRQCSDRLKDM--EDKNNKLLHALRNSGAENIFEAYCWLQQH-- 445
+ + + K+ + KL + SD ++ E++ K L L+N I E L++
Sbjct: 988 IMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEK 1047
Query: 446 -RHELNK 451
R EL K
Sbjct: 1048 SRQELEK 1054
Score = 43 (20.2 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 43/205 (20%), Positives = 72/205 (35%)
Query: 209 QLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL---PWLKYDMKKAE---YIXXXXXXX 261
+++A + E ++ ER +Q+AE L+++E +L L + +AE Y
Sbjct: 852 EMQAKDEELQRTKER-QQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRV 910
Query: 262 XXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL---INENSKRRMDFLEKVDX 318
LHE IE +++ L + KK+ + E + +K+
Sbjct: 911 RLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQL 970
Query: 319 XXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK-IEKLG-- 375
K K + K R T A E K + KL
Sbjct: 971 EKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNK 1030
Query: 376 --SQILELGVQANQKRLQKSEKEKI 398
S I EL V+ ++ + E EKI
Sbjct: 1031 HESMISELEVRLKKEEKSRQELEKI 1055
>UNIPROTKB|E1BXA5 [details] [associations]
symbol:MYH11 "Myosin-11" species:9031 "Gallus gallus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016459 "myosin complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 EMBL:AADN02023593
GeneTree:ENSGT00650000092896 EMBL:AADN02023591 EMBL:AADN02023592
IPI:IPI00597357 Ensembl:ENSGALT00000010534 Uniprot:E1BXA5
Length = 1979
Score = 138 (53.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 65/275 (23%), Positives = 124/275 (45%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLE----SIEKE-DD 698
+Q E++ +L K+ E ++ ++RK+R + K+KLE +E + D
Sbjct: 1586 LQARDEQNEEKRRQLLKQLHEHETELE-DERKQRALAA---AAKKKLEVDVKDLESQVDS 1641
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
N A + + Q L Q Y ++ + + E + +A++ +L+ +
Sbjct: 1642 ANKAREEAIKQLRKLQAQMKDYQRDLDDARAAREEIFATARENEKKAKNLEAELIQLQED 1701
Query: 759 LKQHEKLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTT 814
L E+ QA L E+ +E+ R L D KR+ E+ IA + EL++E + T
Sbjct: 1702 LAAAERARKQADLEKEEMAEELASANSGRTSLQDEKRRLEARIAQLEEELDEEHSNIETM 1761
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-A 873
+ + A+Q Q N+ + Q+ E+ ++Q+E +Q KEL+ L E++ A
Sbjct: 1762 SDRMRKAVQQ-AEQLNNELATERATAQKNENARQQLE----RQN---KELRSKLQEMEGA 1813
Query: 874 LKEKWLPTLRNL---VAQINETFSRNFQEMAVAGE 905
+K K+ T+ L +A + E + +E A +
Sbjct: 1814 VKSKFKSTIAALEAKIASLEEQLEQEAREKQAAAK 1848
Score = 132 (51.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 67/289 (23%), Positives = 135/289 (46%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREM--ENHINLRKRKLESIEKEDDINTA 702
+ E RL ++E K ++E E+I ++ E E E + + K + +KE+++ A
Sbjct: 1044 ELEVRLKKEE--KSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAA 1101
Query: 703 LAKLVDQAADLN--IQQFK-YAIEIKNLLVEIVSCKWSY--AEKHMASI--EFDAKIREL 755
LA+L D+ + N +++ + I +L ++ S K + AEK + E +A EL
Sbjct: 1102 LARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTEL 1161
Query: 756 EFNLKQ---HEKLALQASLHYEDCKKEVEH-CRKHLSDAK--RQ--AESIAFITPELEKE 807
E L ++L + K+ +E R H + + RQ +++ +T +LE +
Sbjct: 1162 EDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAVEELTEQLE-Q 1220
Query: 808 FLEMPTTIEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
F +++ + ++ DN AN I L+Q Q+ EH+++++E ++ + +R
Sbjct: 1221 FKRAKANLDKTKQTLEKDNADLANEIRSLSQ-AKQDVEHKKKKLEVQLQDLQSKYSDGER 1279
Query: 867 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQ---EMAVAGEVSLDEHE 912
E++ K + N+ + +NE S+N + ++A G D E
Sbjct: 1280 VRTELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQE 1328
Score = 125 (49.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 73/316 (23%), Positives = 143/316 (45%)
Query: 644 MQTEQRLIEDEAAKLQKER---EEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDIN 700
M+ + ++ED+ KL KER EE ++ + + E ++ K K ES+ E ++
Sbjct: 989 MEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVR 1048
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
L K ++ + +++ K +E ++ ++ H E A+I EL+ L
Sbjct: 1049 --LKK--EEKSRQELEKIKRKLEGES------------SDLHEQIAELQAQIAELKAQLA 1092
Query: 761 QHEKLALQASL-HYED-------CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP 812
+ E+ LQA+L ED K++ H+SD + ES + EK+ ++
Sbjct: 1093 KKEE-ELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLS 1151
Query: 813 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELK-RFLAEI 871
+E L+ ++D + + L QE +R +E+ + EA +E++ + +
Sbjct: 1152 EELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAV 1211
Query: 872 DALKEKWLPTLRNLVAQINETFSRNFQEMA-VAGEV-SLDEHESDFDKFGILIKVKFRQS 929
+ L E+ L + A +++T ++ A +A E+ SL + + D + K K +
Sbjct: 1212 EELTEQ-LEQFKRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEH-----KKK-KLE 1264
Query: 930 GQLEVLSAHHQSGGER 945
QL+ L + + S GER
Sbjct: 1265 VQLQDLQSKY-SDGER 1279
Score = 68 (29.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 372 EKLGSQILELGVQANQKRL--QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
+K+ Q+L+L Q ++ QK + EK+ K+ ++ D + MED+NNKL
Sbjct: 952 KKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKI--KKMEDDILIMEDQNNKL 1003
Score = 66 (28.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 54/292 (18%), Positives = 110/292 (37%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK---DVERVRQRAE-----LLEKVESM 237
L E+ K K + ++ +++L+ ++EK ++E+++++ E L E++ +
Sbjct: 1021 LAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAEL 1080
Query: 238 KKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKK 297
+ ++ LK + K E N L K I + + L D +
Sbjct: 1081 QAQIAELKAQLAKKEE-ELQAALARLEDETSQKNNAL----KKIRELESHISDLQEDLES 1135
Query: 298 LSSLINENSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXX--XILKARXXXXXXX 355
+ N+ K++ D E+++ +LK
Sbjct: 1136 EKAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRT 1195
Query: 356 XXXQTVPAYEPPHDKIEKLGSQILELG-VQAN-QKRLQKSEKEKILNQNKLTLRQCSDRL 413
Q + +E+L Q+ + +AN K Q EK+ N++ R S
Sbjct: 1196 HEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEI--RSLSQAK 1253
Query: 414 KDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 465
+D+E K KL L +++ Y ++ R ELN++ + L++ V N
Sbjct: 1254 QDVEHKKKKLEVQL-----QDLQSKYSDGERVRTELNEKVHK---LQIEVEN 1297
Score = 53 (23.7 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 43/179 (24%), Positives = 72/179 (40%)
Query: 77 ATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEIT 136
AT KR +E +K +L +T+ + + R K V E LE
Sbjct: 1169 ATQQELRAKREQEVTVLKRALEEETRTHEAQVQ---EMRQKH----TQAVEELTEQLEQF 1221
Query: 137 KRFNIQVNNLTQFLPQDRVC---EFAKLSPVKLLEETEKAVGDPQLP-VQ------HCAL 186
KR ++ Q L +D E LS K E +K + QL +Q
Sbjct: 1222 KRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEHKKKKLEVQLQDLQSKYSDGERVR 1281
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDV----ERVRQRAELLEKVESMKKKL 241
E + K+ ++ V+ LN+ ++ N++ KDV +++ ELL+ E ++KL
Sbjct: 1282 TELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQELLQ--EETRQKL 1338
Score = 49 (22.3 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 17/71 (23%), Positives = 31/71 (43%)
Query: 395 KEKILNQNKLTLRQCSDRLKDMED--KNNKLLHALRNSGAENIFEAYCWLQQHRHELNKE 452
KE++ NK+ + D + +D KN L + + + + E L++ EL
Sbjct: 1505 KEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQAA 1564
Query: 453 AYGPVLLEVNV 463
+ LEVN+
Sbjct: 1565 EDAKLRLEVNM 1575
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 368 HDKIEKLGSQILELGVQ-ANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
H K +KL Q+ +L + ++ +R++ EK+ ++ ++ + + L + E KN KL
Sbjct: 1258 HKK-KKLEVQLQDLQSKYSDGERVRTELNEKV-HKLQIEVENVTSLLNEAESKNIKLTKD 1315
Query: 427 LRNSGAENIFEAYCWLQQH-RHELN 450
+ G++ + + LQ+ R +LN
Sbjct: 1316 VATLGSQ-LQDTQELLQEETRQKLN 1339
Score = 45 (20.9 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 26/113 (23%), Positives = 49/113 (43%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP-VKLLEETEKAVGDPQLPVQHCALVEK 189
E+L+ R + V + L D+ +L V+ + E+ + L +Q L +
Sbjct: 1328 ELLQEETRQKLNVTTKLRQLEDDKNSLQEQLDEEVEAKQNLERHIST--LTIQ---LSDS 1382
Query: 190 SSKLKTIECTVKRNGDTLNQ-LKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
KL+ TV +T+ + K L E E ++ ++A +K+E K +L
Sbjct: 1383 KKKLQEFTATV----ETMEEGKKKLQREIESLTQQFEEKAASYDKLEKTKNRL 1431
Score = 44 (20.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 390 LQKSEKEKILNQNKLTLRQCSDRLKDM--EDKNNKLLHALRNSGAENIFEAYCWLQQH-- 445
+ + + K+ + KL + SD ++ E++ K L L+N I E L++
Sbjct: 995 IMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEK 1054
Query: 446 -RHELNK 451
R EL K
Sbjct: 1055 SRQELEK 1061
Score = 43 (20.2 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 43/205 (20%), Positives = 72/205 (35%)
Query: 209 QLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL---PWLKYDMKKAE---YIXXXXXXX 261
+++A + E ++ ER +Q+AE L+++E +L L + +AE Y
Sbjct: 859 EMQAKDEELQRTKER-QQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRV 917
Query: 262 XXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL---INENSKRRMDFLEKVDX 318
LHE IE +++ L + KK+ + E + +K+
Sbjct: 918 RLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQL 977
Query: 319 XXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK-IEKLG-- 375
K K + K R T A E K + KL
Sbjct: 978 EKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNK 1037
Query: 376 --SQILELGVQANQKRLQKSEKEKI 398
S I EL V+ ++ + E EKI
Sbjct: 1038 HESMISELEVRLKKEEKSRQELEKI 1062
>UNIPROTKB|P10587 [details] [associations]
symbol:MYH11 "Myosin-11" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0032982 "myosin filament" evidence=IEA] [GO:0008307 "structural
constituent of muscle" evidence=ISS] [GO:0048251 "elastic fiber
assembly" evidence=ISS] [GO:0048739 "cardiac muscle fiber
development" evidence=ISS] [GO:0030241 "skeletal muscle myosin
thick filament assembly" evidence=ISS] [GO:0030016 "myofibril"
evidence=IEA] [GO:0001725 "stress fiber" evidence=IEA] [GO:0003774
"motor activity" evidence=IEA] [GO:0005859 "muscle myosin complex"
evidence=IEA] [GO:0030485 "smooth muscle contractile fiber"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006939 "smooth muscle contraction" evidence=ISS]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0030016 GO:GO:0006939 GO:GO:0001725
GO:GO:0030485 GO:GO:0008307 Reactome:REACT_115433 GO:GO:0003774
eggNOG:COG5022 GO:GO:0048251 GO:GO:0030241 GO:GO:0048739
GO:GO:0005859 PDB:3J04 PDBsum:3J04 PDB:1I84 PDBsum:1I84
GO:GO:0032982 GeneTree:ENSGT00650000092896 HOGENOM:HOG000173958
HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1 EMBL:X06546
IPI:IPI00601453 PIR:S03166 RefSeq:NP_990605.1 UniGene:Gga.3225
PDB:1BR1 PDB:1BR2 PDB:1BR4 PDB:3DTP PDBsum:1BR1 PDBsum:1BR2
PDBsum:1BR4 PDBsum:3DTP DisProt:DP00102 ProteinModelPortal:P10587
SMR:P10587 IntAct:P10587 STRING:P10587 PRIDE:P10587
Ensembl:ENSGALT00000033605 GeneID:396211 KEGG:gga:396211 CTD:4629
InParanoid:P10587 OMA:QYEEKAA EvolutionaryTrace:P10587
NextBio:20816263 Uniprot:P10587
Length = 1979
Score = 138 (53.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 65/275 (23%), Positives = 124/275 (45%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLE----SIEKE-DD 698
+Q E++ +L K+ E ++ ++RK+R + K+KLE +E + D
Sbjct: 1586 LQARDEQNEEKRRQLLKQLHEHETELE-DERKQRALAA---AAKKKLEVDVKDLESQVDS 1641
Query: 699 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 758
N A + + Q L Q Y ++ + + E + +A++ +L+ +
Sbjct: 1642 ANKAREEAIKQLRKLQAQMKDYQRDLDDARAAREEIFATARENEKKAKNLEAELIQLQED 1701
Query: 759 LKQHEKLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTT 814
L E+ QA L E+ +E+ R L D KR+ E+ IA + EL++E + T
Sbjct: 1702 LAAAERARKQADLEKEEMAEELASANSGRTSLQDEKRRLEARIAQLEEELDEEHSNIETM 1761
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-A 873
+ + A+Q Q N+ + Q+ E+ ++Q+E +Q KEL+ L E++ A
Sbjct: 1762 SDRMRKAVQQ-AEQLNNELATERATAQKNENARQQLE----RQN---KELRSKLQEMEGA 1813
Query: 874 LKEKWLPTLRNL---VAQINETFSRNFQEMAVAGE 905
+K K+ T+ L +A + E + +E A +
Sbjct: 1814 VKSKFKSTIAALEAKIASLEEQLEQEAREKQAAAK 1848
Score = 132 (51.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 67/289 (23%), Positives = 135/289 (46%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREM--ENHINLRKRKLESIEKEDDINTA 702
+ E RL ++E K ++E E+I ++ E E E + + K + +KE+++ A
Sbjct: 1044 ELEVRLKKEE--KSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAA 1101
Query: 703 LAKLVDQAADLN--IQQFK-YAIEIKNLLVEIVSCKWSY--AEKHMASI--EFDAKIREL 755
LA+L D+ + N +++ + I +L ++ S K + AEK + E +A EL
Sbjct: 1102 LARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTEL 1161
Query: 756 EFNLKQ---HEKLALQASLHYEDCKKEVEH-CRKHLSDAK--RQ--AESIAFITPELEKE 807
E L ++L + K+ +E R H + + RQ +++ +T +LE +
Sbjct: 1162 EDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAVEELTEQLE-Q 1220
Query: 808 FLEMPTTIEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
F +++ + ++ DN AN I L+Q Q+ EH+++++E ++ + +R
Sbjct: 1221 FKRAKANLDKTKQTLEKDNADLANEIRSLSQ-AKQDVEHKKKKLEVQLQDLQSKYSDGER 1279
Query: 867 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQ---EMAVAGEVSLDEHE 912
E++ K + N+ + +NE S+N + ++A G D E
Sbjct: 1280 VRTELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQE 1328
Score = 125 (49.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 73/316 (23%), Positives = 143/316 (45%)
Query: 644 MQTEQRLIEDEAAKLQKER---EEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDIN 700
M+ + ++ED+ KL KER EE ++ + + E ++ K K ES+ E ++
Sbjct: 989 MEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVR 1048
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
L K ++ + +++ K +E ++ ++ H E A+I EL+ L
Sbjct: 1049 --LKK--EEKSRQELEKIKRKLEGES------------SDLHEQIAELQAQIAELKAQLA 1092
Query: 761 QHEKLALQASL-HYED-------CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP 812
+ E+ LQA+L ED K++ H+SD + ES + EK+ ++
Sbjct: 1093 KKEE-ELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLS 1151
Query: 813 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELK-RFLAEI 871
+E L+ ++D + + L QE +R +E+ + EA +E++ + +
Sbjct: 1152 EELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAV 1211
Query: 872 DALKEKWLPTLRNLVAQINETFSRNFQEMA-VAGEV-SLDEHESDFDKFGILIKVKFRQS 929
+ L E+ L + A +++T ++ A +A E+ SL + + D + K K +
Sbjct: 1212 EELTEQ-LEQFKRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEH-----KKK-KLE 1264
Query: 930 GQLEVLSAHHQSGGER 945
QL+ L + + S GER
Sbjct: 1265 VQLQDLQSKY-SDGER 1279
Score = 68 (29.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 372 EKLGSQILELGVQANQKRL--QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
+K+ Q+L+L Q ++ QK + EK+ K+ ++ D + MED+NNKL
Sbjct: 952 KKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKI--KKMEDDILIMEDQNNKL 1003
Score = 66 (28.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 54/292 (18%), Positives = 110/292 (37%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK---DVERVRQRAE-----LLEKVESM 237
L E+ K K + ++ +++L+ ++EK ++E+++++ E L E++ +
Sbjct: 1021 LAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAEL 1080
Query: 238 KKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKK 297
+ ++ LK + K E N L K I + + L D +
Sbjct: 1081 QAQIAELKAQLAKKEE-ELQAALARLEDETSQKNNAL----KKIRELESHISDLQEDLES 1135
Query: 298 LSSLINENSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXX--XILKARXXXXXXX 355
+ N+ K++ D E+++ +LK
Sbjct: 1136 EKAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRT 1195
Query: 356 XXXQTVPAYEPPHDKIEKLGSQILELG-VQAN-QKRLQKSEKEKILNQNKLTLRQCSDRL 413
Q + +E+L Q+ + +AN K Q EK+ N++ R S
Sbjct: 1196 HEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEI--RSLSQAK 1253
Query: 414 KDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 465
+D+E K KL L +++ Y ++ R ELN++ + L++ V N
Sbjct: 1254 QDVEHKKKKLEVQL-----QDLQSKYSDGERVRTELNEKVHK---LQIEVEN 1297
Score = 53 (23.7 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 43/179 (24%), Positives = 72/179 (40%)
Query: 77 ATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEIT 136
AT KR +E +K +L +T+ + + R K V E LE
Sbjct: 1169 ATQQELRAKREQEVTVLKRALEEETRTHEAQVQ---EMRQKH----TQAVEELTEQLEQF 1221
Query: 137 KRFNIQVNNLTQFLPQDRVC---EFAKLSPVKLLEETEKAVGDPQLP-VQ------HCAL 186
KR ++ Q L +D E LS K E +K + QL +Q
Sbjct: 1222 KRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEHKKKKLEVQLQDLQSKYSDGERVR 1281
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDV----ERVRQRAELLEKVESMKKKL 241
E + K+ ++ V+ LN+ ++ N++ KDV +++ ELL+ E ++KL
Sbjct: 1282 TELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQELLQ--EETRQKL 1338
Score = 49 (22.3 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 17/71 (23%), Positives = 31/71 (43%)
Query: 395 KEKILNQNKLTLRQCSDRLKDMED--KNNKLLHALRNSGAENIFEAYCWLQQHRHELNKE 452
KE++ NK+ + D + +D KN L + + + + E L++ EL
Sbjct: 1505 KEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQAA 1564
Query: 453 AYGPVLLEVNV 463
+ LEVN+
Sbjct: 1565 EDAKLRLEVNM 1575
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 368 HDKIEKLGSQILELGVQ-ANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
H K +KL Q+ +L + ++ +R++ EK+ ++ ++ + + L + E KN KL
Sbjct: 1258 HKK-KKLEVQLQDLQSKYSDGERVRTELNEKV-HKLQIEVENVTSLLNEAESKNIKLTKD 1315
Query: 427 LRNSGAENIFEAYCWLQQH-RHELN 450
+ G++ + + LQ+ R +LN
Sbjct: 1316 VATLGSQ-LQDTQELLQEETRQKLN 1339
Score = 45 (20.9 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 26/113 (23%), Positives = 49/113 (43%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP-VKLLEETEKAVGDPQLPVQHCALVEK 189
E+L+ R + V + L D+ +L V+ + E+ + L +Q L +
Sbjct: 1328 ELLQEETRQKLNVTTKLRQLEDDKNSLQEQLDEEVEAKQNLERHIST--LTIQ---LSDS 1382
Query: 190 SSKLKTIECTVKRNGDTLNQ-LKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
KL+ TV +T+ + K L E E ++ ++A +K+E K +L
Sbjct: 1383 KKKLQEFTATV----ETMEEGKKKLQREIESLTQQFEEKAASYDKLEKTKNRL 1431
Score = 44 (20.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 390 LQKSEKEKILNQNKLTLRQCSDRLKDM--EDKNNKLLHALRNSGAENIFEAYCWLQQH-- 445
+ + + K+ + KL + SD ++ E++ K L L+N I E L++
Sbjct: 995 IMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEK 1054
Query: 446 -RHELNK 451
R EL K
Sbjct: 1055 SRQELEK 1061
Score = 43 (20.2 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 43/205 (20%), Positives = 72/205 (35%)
Query: 209 QLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL---PWLKYDMKKAE---YIXXXXXXX 261
+++A + E ++ ER +Q+AE L+++E +L L + +AE Y
Sbjct: 859 EMQAKDEELQRTKER-QQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRV 917
Query: 262 XXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL---INENSKRRMDFLEKVDX 318
LHE IE +++ L + KK+ + E + +K+
Sbjct: 918 RLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQL 977
Query: 319 XXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK-IEKLG-- 375
K K + K R T A E K + KL
Sbjct: 978 EKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNK 1037
Query: 376 --SQILELGVQANQKRLQKSEKEKI 398
S I EL V+ ++ + E EKI
Sbjct: 1038 HESMISELEVRLKKEEKSRQELEKI 1062
>UNIPROTKB|E1BKZ5 [details] [associations]
symbol:GOLGB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005793
"endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] InterPro:IPR026202 GO:GO:0005794 GO:GO:0005793
GeneTree:ENSGT00700000104188 PANTHER:PTHR18887 EMBL:DAAA02001585
IPI:IPI00711781 Ensembl:ENSBTAT00000011669 OMA:RPEYSEP
Uniprot:E1BKZ5
Length = 3273
Score = 133 (51.9 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 64/311 (20%), Positives = 145/311 (46%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
+E+ + L ++ EI + Q+ K++++E + ++ +E EK+ + + ++
Sbjct: 869 VEELSQALSQKELEIAKMDQLLLEKKKDVE----ILQQTIE--EKDQQVTELSFSMTEKM 922
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-HEKLALQA 769
LN ++F +EIK L E ++ E +E D +E+ ++KQ +++L+
Sbjct: 923 VQLNEEKFSLGVEIKTLK-EQLNLLSRAEETKKEQMEED---KEIVSSIKQNYDELSPAG 978
Query: 770 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 829
+ E+ ++E++ +K KR+ ++ A I KE L+ + +EE A ++D S+
Sbjct: 979 LISKEELQRELDLVKKESEQRKRKLQA-ALIN---RKELLQKVSRLEEELAKVKDEPSKE 1034
Query: 830 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQI 889
L+++ +E E + EDL + + +E++ L I + KE L +R +
Sbjct: 1035 ---ILLHESERREVEEDKESKEDLEKRVTSKCQEIEMSLKLIISEKEMELEHIRK---DL 1088
Query: 890 NETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGE-RSVS 948
E + Q AV +++ + E ++ +L ++ L+ ++ G+ S +
Sbjct: 1089 EEKAAIEEQLQAVVKQMNQNLQEKT-NQIDLLQAEVVENQAIIQKLTTGNKDAGDGNSAA 1147
Query: 949 TILYLVSLQDL 959
+ V++ L
Sbjct: 1148 PVKEAVAISPL 1158
Score = 78 (32.5 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 48/215 (22%), Positives = 96/215 (44%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNK--LTLRQCSDRLKD----MEDKNNK 422
+++E+ G EL Q+ L++ ++ + L+LR+ L+ ++D+N+K
Sbjct: 351 EQLEQAGQAQAEL--QSRHSALEQKHNAEMEEKTSHILSLRKSEQELQSACDALKDQNSK 408
Query: 423 LLHALRNSGAEN--IFEAY--CWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGH 478
LL A + + + LQQ E+N+ P LL+ ++++ + + H G
Sbjct: 409 LLQDKNEQAAHSAQVIQQLEVDQLQQKSEEINQFLNKPTLLKHEIASQTCSPDVS-HEG- 466
Query: 479 YIWKSFITQDAGDRDFLAKNLKPFD----VPILNYVSNESSRKEPFQISEEMRALGISAR 534
+T+++ FL K + + +LN V E + E ++S ++ L R
Sbjct: 467 ---TQAVTEES--IAFLQKRVVELENEKGALLLNSVELEELKAENEKLSSQITLLESQKR 521
Query: 535 LDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKA 569
+V H V V I++ L+ S ++E+ Q A
Sbjct: 522 TGEVDREVHEVSMVDITR--LNKSSFSAEESGQDA 554
Score = 54 (24.1 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 369 DKIEKLGSQILELGVQANQKR--LQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN 421
D++E+L Q+LEL V ++ +K+ EK + LT + + K+ E+ NN
Sbjct: 692 DELERLKGQVLELEVNLHKAEEIYEKNLDEKAKEISMLT-QLIEEFKKNAENTNN 745
Score = 50 (22.7 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 36/157 (22%), Positives = 71/157 (45%)
Query: 97 LRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
L GD +E++ + + +S+ FN + + +VLE V L + + Q +
Sbjct: 16 LSGDDTDENMRASLEPELPQESDMEFNDRT--QEDVLERLAYVEQLVVELKEIIRQ-KDA 72
Query: 157 EFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL--------N 208
E + V L+E KA + ++ A + +S K IE +K G T+
Sbjct: 73 ELQQKDEV--LQEERKAADNKIKKLKLHAKAKLTSLNKHIE-EMKAQGGTVLSTEPQSEE 129
Query: 209 QLKA---LNVEQEKDVERVRQRAELLEK-VESMKKKL 241
QL + E+E +VE+++ + + E+ + S++ +L
Sbjct: 130 QLSKHDKSSTEEEIEVEKIKHKLQEKEELITSLQAQL 166
>UNIPROTKB|E1C1F2 [details] [associations]
symbol:TRIP11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] InterPro:IPR000237 PROSITE:PS50913
GO:GO:0005634 GO:GO:0005794 GeneTree:ENSGT00700000104188
GO:GO:0000042 OMA:LESEVDH EMBL:AADN02003653 IPI:IPI00580771
Ensembl:ENSGALT00000017502 Uniprot:E1C1F2
Length = 1980
Score = 129 (50.5 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 50/263 (19%), Positives = 128/263 (48%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAK 705
E + ++++A Q+ER++++ ++ ++ + +++ I K + + +E + + L +
Sbjct: 1533 EVKSMQEKAVTFQQERDQVMVALKQKQMESSALQSEIQHLHEKEQRLNQELERLRNHLIE 1592
Query: 706 LVD----QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE-KHMASIEFDAKIRELEFNLK 760
+ D +A ++ K ++ L ++VS + H A+++ ++ +L K
Sbjct: 1593 MEDSYTREALAAEDRETKLRKKVSILEEKLVSSSTAVENASHQANLQVESLQEQLNLVSK 1652
Query: 761 QHEKLALQASLHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEK------EFLEMPT 813
Q ++ LQ ++ + K+ + + + Q E A + ELEK E+ +
Sbjct: 1653 QRDETVLQLAISQDQVKQYALSLTNLQMVLEQFQQEEKAMYSAELEKHQKETAEWKKKAK 1712
Query: 814 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 873
+EE ++Q+N+ +AN+ + ++ + ++ QIE+L K+E E++R + E D
Sbjct: 1713 NLEEKVISLQENLEEANAALDAASRLTEQLDVKEEQIEEL--KKEG---EIRREMLE-D- 1765
Query: 874 LKEKWLPTLRNLVAQINETFSRN 896
++ K + + + ++++ RN
Sbjct: 1766 VQNKLMNLINSTEGKVDKLLMRN 1788
Score = 116 (45.9 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 57/247 (23%), Positives = 110/247 (44%)
Query: 645 QTEQRLIEDE---AAKLQKEREEIINIVQIEKRKRREM---ENHIN---LRKRKLESIEK 695
+ +QRL E E + L K E NI Q +++ E+ + L+K++LE+ +
Sbjct: 610 ELQQRLKEREEELSLSLSKSTE---NIKQESSHSSQDLILKESDVEIVELQKKQLENKQL 666
Query: 696 EDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYA-EKHMASIEFDAKIRE 754
+D+ +L+ L + L + F+ E+K L + +S K EK + R
Sbjct: 667 NEDLEKSLSDLKTENGKL-MAAFE---ELKQELNDTISEKNKVCLEKDTVVEALKLEKRH 722
Query: 755 LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF--LEMP 812
LE L Q EK + + YE +E+ + R ++ Q E + EK+F E+
Sbjct: 723 LETELNQTEKRLFEQAQKYEQTIEELSNARS-MNTTALQLEHERLVKLNQEKDFKIAELK 781
Query: 813 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLA--- 869
++E++E Q+ + + + + + ++ IE L + K+EL+ ++
Sbjct: 782 RSMEQMEVDHQETKEMLTTSLGGQKQLTELLKEKEEFIEKLKNQASLVKQELEEYMEVSK 841
Query: 870 EIDALKE 876
+ D LK+
Sbjct: 842 KQDVLKQ 848
Score = 109 (43.4 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 62/277 (22%), Positives = 125/277 (45%)
Query: 652 EDEAAKLQKEREEII-NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL-VD- 708
E E + ERE +I + +++K+ + ++ I L K KL E D T K +D
Sbjct: 482 EHELNESIAERETLIAELEELDKQNQEATQHMITL-KEKLSKQHIETDSITKQLKFDIDV 540
Query: 709 ---QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 765
+ A L +++ + E+ ++ C ++ + H++ + +R L+ LK+ +
Sbjct: 541 ERKKVAKLEMEKMETIKELDTQKEKLSQCSYALNDLHISKQQLQDNVRNLQEQLKKAQDC 600
Query: 766 ALQASLHYEDCKKEVEHCRKHLS-DAKRQAESIAFITPELEKEFL--EMPTTIEELEAAI 822
L + ++ ++ + LS + E+I + ++ + E I EL+
Sbjct: 601 NLHNKKEIRELQQRLKEREEELSLSLSKSTENIKQESSHSSQDLILKESDVEIVELQKKQ 660
Query: 823 QDNISQAN-----SIFFL---NQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
+N Q N S+ L N ++ +E ++++ D T E +K L++ ++AL
Sbjct: 661 LEN-KQLNEDLEKSLSDLKTENGKLMAAFEELKQELND--TISEKNKVCLEKDTV-VEAL 716
Query: 875 K-EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDE 910
K EK R+L ++N+T R F E A E +++E
Sbjct: 717 KLEK-----RHLETELNQTEKRLF-EQAQKYEQTIEE 747
Score = 79 (32.9 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDR--LKDMEDKNNKLLHA 426
++IE+L Q+ + GV A+ K +EK + QN L R+ D +KD+ED+ KL
Sbjct: 268 ERIEELEHQLQQDGVSADAMVDSKISEEKKITQN-LEGRKAEDLQIIKDLEDEIRKLNQK 326
Query: 427 LRNSGAEN 434
L ++ EN
Sbjct: 327 LSSAKEEN 334
Score = 65 (27.9 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 56/305 (18%), Positives = 120/305 (39%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLE-ETEKAVGDPQLPVQHC--ALVEKS 190
+++K+ +I+ +++T+ L D E K++ +++ + ET K + + + C AL +
Sbjct: 519 KLSKQ-HIETDSITKQLKFDIDVERKKVAKLEMEKMETIKELDTQKEKLSQCSYALNDLH 577
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRA-ELLEKVE-SMKKKLPWLKYDM 248
+ ++ V+ + L + + N+ +K++ ++QR E E++ S+ K +K +
Sbjct: 578 ISKQQLQDNVRNLQEQLKKAQDCNLHNKKEIRELQQRLKEREEELSLSLSKSTENIKQES 637
Query: 249 KKA--EYIXXXXXXXXXXXXXXXXXNT-LHE-FSKPIEGKKQEKAILDGDCKKLSSLINE 304
+ + I N L+E K + K E L ++L +N+
Sbjct: 638 SHSSQDLILKESDVEIVELQKKQLENKQLNEDLEKSLSDLKTENGKLMAAFEELKQELND 697
Query: 305 N-SKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILK-ARXXXXXXXXXXQTVP 362
S++ LEK K K +
Sbjct: 698 TISEKNKVCLEKDTVVEALKLEKRHLETELNQTEKRLFEQAQKYEQTIEELSNARSMNTT 757
Query: 363 AYEPPHDKIEKLGSQ----ILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED 418
A + H+++ KL + I EL Q + E +++L + +Q ++ LK+ E+
Sbjct: 758 ALQLEHERLVKLNQEKDFKIAELKRSMEQMEVDHQETKEMLTTSLGGQKQLTELLKEKEE 817
Query: 419 KNNKL 423
KL
Sbjct: 818 FIEKL 822
Score = 62 (26.9 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKI-----LNQNKLTLRQCSDRLKDMEDKNNK 422
H + + + Q L+ + +K++ K E EK+ L+ K L QCS L D+ +
Sbjct: 524 HIETDSITKQ-LKFDIDVERKKVAKLEMEKMETIKELDTQKEKLSQCSYALNDLHISKQQ 582
Query: 423 LLHALRN 429
L +RN
Sbjct: 583 LQDNVRN 589
Score = 60 (26.2 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 36/149 (24%), Positives = 68/149 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ-DRVCEFAK 160
KEE+L + + + K N + + + T+ N ++ L Q L + + +
Sbjct: 432 KEENLKLRNEKEELEKE--LLNAQHKDENVISAYTEDQNSELRLLKQDLERKEHELNESI 489
Query: 161 LSPVKLLEETEKAVGDPQLPVQHC-ALVEKSSKLKTIECTVKRNGDTLN-QLKA-LNVEQ 217
L+ E E+ Q QH L EK SK + IE D++ QLK ++VE+
Sbjct: 490 AERETLIAELEELDKQNQEATQHMITLKEKLSK-QHIET------DSITKQLKFDIDVER 542
Query: 218 EKDVERVRQRAELLEKVESMKKKLPWLKY 246
+K + ++ E ++++++ K+KL Y
Sbjct: 543 KKVAKLEMEKMETIKELDTQKEKLSQCSY 571
Score = 55 (24.4 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 390 LQKSEKEK-ILNQNKLT-LRQCSDRLKDMEDKNNKLLHALRNSGAENI 435
LQKS +EK IL ++K L S+ L + E++N L A+ N N+
Sbjct: 1407 LQKSLREKDILIKSKSDQLLSVSENLSNKENENELLKQAVTNLKERNL 1454
Score = 53 (23.7 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 66/383 (17%), Positives = 140/383 (36%)
Query: 63 IALALGGDTQLLGRATSIGAYVKR-GEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWF 121
+ +LGG QL ++++ ++ +K L EE++ + +K D ++
Sbjct: 798 LTTSLGGQKQLTELLKEKEEFIEKLKNQASLVKQEL-----EEYMEVSKKQDVLKQN--- 849
Query: 122 FNGKVVPKGEVLEITKRFNIQVNNLTQFLP--QDRVCEFAKLSPVKLLEETEKAVGDPQL 179
V K + L I K N + + L Q R + + ++ E E V QL
Sbjct: 850 ----VEEKDKSLAIMKEENNHLKEEIERLKDQQSRATPVVEPKTLDIIIELESEV--TQL 903
Query: 180 PVQHCALVEKSS-KLKTIEC----TVKRNGDTLNQLKALNVE----QEKDVERVRQRAEL 230
V +L E+ KTIE TV+ Q K ++ ++ +V R E
Sbjct: 904 KVIKNSLEEEIEVHKKTIEDQNQKTVQLQQSLQEQRKEIDESKFQCEQMNVAHERLSLEK 963
Query: 231 LEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAI 290
E+++ ++K + +K + K + N + K K + + +
Sbjct: 964 DEEIKKLQKTIEQIKTQLHKERQVIQTDSTDLFQETKVQTLNGENGNEKHDLSKAEIERL 1023
Query: 291 LDGDCKKLSSLINENSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXX 350
+ G K+ I +++ + +++D K + +
Sbjct: 1024 VKG-IKEREMEIKLLNEKNVSLSQQIDQLSKDEVGKLTRIIQEKDLEIQALSARVSSASY 1082
Query: 351 XXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS 410
Q + AY +++ + L + + K+E KI++ + ++ +
Sbjct: 1083 RQDVLGLQQQLQAYVMEREQV------LAVLSEKTRENSQLKTEYHKIMDM--VAAKEAA 1134
Query: 411 DRLKDMEDKNNKLLHALRNSGAE 433
L ++++N KL + NSG +
Sbjct: 1135 --LVRLQEENQKLSNRFENSGQD 1155
Score = 52 (23.4 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 14/59 (23%), Positives = 37/59 (62%)
Query: 186 LVEKSSKLKTIECTVKRNGD---TLNQLKALNVEQ-EKDVERVRQRAELLEKVESMKKK 240
L EK S ++T++ +R D T ++ + + E+ + ++ ++R++ ++L+K S+++K
Sbjct: 1358 LQEKDSTIRTLQENNQRLSDSVATASEFERRSQEETDSEMRQIREKHDVLQK--SLREK 1414
Score = 49 (22.3 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 37/166 (22%), Positives = 77/166 (46%)
Query: 94 KISLRGDTKEEHLTI-MRKIDTR-NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQF-L 150
K+ L DT E L + R ++T N++E + + +E + N + N T L
Sbjct: 704 KVCLEKDTVVEALKLEKRHLETELNQTEKRLFEQAQKYEQTIE--ELSNARSMNTTALQL 761
Query: 151 PQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
+R+ + + K+ E ++++ Q+ V H +++ ++ T G QL
Sbjct: 762 EHERLVKLNQEKDFKIAE-LKRSM--EQMEVDH----QETKEM----LTTSLGGQ--KQL 808
Query: 211 KALNVEQEKDVERVRQRAEL----LEKVESMKKKLPWLKYDMKKAE 252
L E+E+ +E+++ +A L LE+ + KK LK ++++ +
Sbjct: 809 TELLKEKEEFIEKLKNQASLVKQELEEYMEVSKKQDVLKQNVEEKD 854
Score = 46 (21.3 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 12/65 (18%), Positives = 36/65 (55%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQR-AELLEKVESMKKKLPWL 244
L+E + ++ + + L +++++N Q+ + ER+++ ++L EK E+ + ++ L
Sbjct: 38 LLEGAEEVGDAATELHVSNSRLREIESINAAQKSENERLKKVCSDLEEKHEAAELQIKQL 97
Query: 245 KYDMK 249
+ +
Sbjct: 98 SVEYR 102
>ZFIN|ZDB-GENE-030616-162 [details] [associations]
symbol:myh10 "myosin, heavy chain 10, non-muscle"
species:7955 "Danio rerio" [GO:0016459 "myosin complex"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051015 "actin filament
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612
Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 ZFIN:ZDB-GENE-030616-162 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00650000092896
SUPFAM:SSF50084 EMBL:AL954384 EMBL:FP017252 IPI:IPI00865727
Ensembl:ENSDART00000046359 Ensembl:ENSDART00000151114
Uniprot:F1R3G4
Length = 1992
Score = 152 (58.6 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 72/293 (24%), Positives = 136/293 (46%)
Query: 646 TEQRLIEDEAAK---LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
T Q E+E AK K ++E++ +V +E+R ++E + L K K + + D+
Sbjct: 1031 TSQLAEEEEKAKNLGKVKNKQEMM-MVDLEERLKKEEKTRQELEKAKRKLDAETTDLQDQ 1089
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLV---EIVSCKWSYAEKHMASIEFDAKIRELEFNL 759
+A+L Q +L IQ K E++ +L E V+ K + A K + E A++ EL+ +L
Sbjct: 1090 IAELQAQIDELKIQLAKKEEELQAVLARGDEEVAQK-NNALKQLR--ELQAQLAELQEDL 1146
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL- 818
+ + +A D +E+E + L D + + + E+E E+ I++
Sbjct: 1147 ESEKAARNKAEKLKRDLSEELEALKTELEDTLDTTAAQQELRSKREQEVAELKKAIDDET 1206
Query: 819 ---EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLS-TKQ--EADKKELKRFLAEID 872
E+ IQ+ + Q + + I ++ E +R +L KQ E+D KEL + +
Sbjct: 1207 RNHESQIQE-MRQRHGTAL--EEISEQLEQAKRVKGNLEKNKQTLESDNKELTNEVKSLQ 1263
Query: 873 ALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEH--ESDFDKFGILIK 923
K + + L AQ+ E +R + V GE++ H +++ D L++
Sbjct: 1264 QAKSESEHKRKKLEAQLQEVMARFSEGEKVKGELADRTHKIQTELDNVSCLLE 1316
Score = 52 (23.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 15/55 (27%), Positives = 32/55 (58%)
Query: 372 EKLGSQILELGVQANQKRL--QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
+K+ S I +L Q +++ QK + EK+ + K+ ++ + + +ED+N+K L
Sbjct: 965 KKMQSHIQDLEEQLDEEEAARQKLQLEKVTAEAKI--KKMEEDILLLEDQNSKFL 1017
Score = 38 (18.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
KI+K+ IL L Q N K L KEK L ++++ + + +L + E+K L
Sbjct: 998 KIKKMEEDILLLEDQ-NSKFL----KEKKLLEDRVG--EMTSQLAEEEEKAKNL 1044
>WB|WBGene00006789 [details] [associations]
symbol:unc-54 species:6239 "Caenorhabditis elegans"
[GO:0003774 "motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0007413 "axonal
fasciculation" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0030241 "skeletal muscle myosin
thick filament assembly" evidence=IMP] [GO:0006936 "muscle
contraction" evidence=IMP] [GO:0048017 "inositol lipid-mediated
signaling" evidence=IPI] [GO:0043050 "pharyngeal pumping"
evidence=IPI] [GO:0018991 "oviposition" evidence=IMP] [GO:0005859
"muscle myosin complex" evidence=IDA] [GO:0008307 "structural
constituent of muscle" evidence=IDA] [GO:0005863 "striated muscle
myosin thick filament" evidence=IDA] [GO:0000146 "microfilament
motor activity" evidence=IDA] [GO:0051015 "actin filament binding"
evidence=IDA] InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 SMART:SM00242 GO:GO:0005524 GO:GO:0018991
GO:GO:0010171 GO:GO:0040011 GO:GO:0051015 GO:GO:0043050
GO:GO:0006936 GO:GO:0000146 GO:GO:0008307 GO:GO:0007413
eggNOG:COG5022 GO:GO:0030241 EMBL:Z83107 GO:GO:0005863
GO:GO:0048017 KO:K10352 HOGENOM:HOG000173959 EMBL:J01050
EMBL:Z81499 EMBL:V01494 PIR:T20770 RefSeq:NP_493596.1
ProteinModelPortal:P02566 SMR:P02566 DIP:DIP-26548N IntAct:P02566
MINT:MINT-231086 STRING:P02566 PaxDb:P02566 GeneID:259839
KEGG:cel:CELE_F11C3.3 UCSC:F11C3.3.1 CTD:259839 WormBase:F11C3.3
InParanoid:P02566 NextBio:952628 Uniprot:P02566
Length = 1966
Score = 105 (42.0 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 39/140 (27%), Positives = 69/140 (49%)
Query: 119 EWF-FNGKVVPK---GEVLEITKRFNIQVNNLTQFLP-QDRVCEFAKLSPVKLLEE-TEK 172
EWF GKV P G+ E ++ N +V L L ++++ + + S KL+EE T
Sbjct: 840 EWFKLYGKVKPMLKAGKEAEELEKINDKVKALEDSLAKEEKLRKELEESSAKLVEEKTSL 899
Query: 173 AVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE 232
Q E+ +KL+ + + LN A N ++ DV+R +++ E
Sbjct: 900 FTNLESTKTQLSDAEERLAKLEAQQKDASKQLSELNDQLADNEDRTADVQRAKKKIEA-- 957
Query: 233 KVESMKKKLPWLKYDMKKAE 252
+VE++KK++ L+ ++KAE
Sbjct: 958 EVEALKKQIQDLEMSLRKAE 977
Score = 102 (41.0 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 59/261 (22%), Positives = 111/261 (42%)
Query: 653 DEAAKLQKEREEIINI-VQIEKRKRR---EMENHINLRKRK--LESIEKEDDI--NTALA 704
D L++ +E++ + +Q+E+ +R E N KR L+S EKE+ + N A
Sbjct: 1650 DAQKNLKRYQEQVRELQLQVEEEQRNGADTREQFFNAEKRATLLQS-EKEELLVANEAAE 1708
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSY-AEKHMASIEFDAKIRELEFNLKQHE 763
+ QA A E + + S K E + D + E + ++ +
Sbjct: 1709 RARKQAEYEAADARDQANEANAQVSSLTSAKRKLEGEIQAIHADLDETLNEYKAAEERSK 1768
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKR----QAESIAFITPELEKEFLEM-PTTIEEL 818
K A+ E+ ++E EH + H+ ++ Q + I E E L+ I +L
Sbjct: 1769 KAIADATRLAEELRQEQEHSQ-HVDRLRKGLEQQLKEIQVRLDEAEAAALKGGKKVIAKL 1827
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
E +++ S+ + Q+ + R++ +L + + DKK +R ID L++K
Sbjct: 1828 EQRVRELESELDGEQRRFQDANKNLGRADRRVRELQFQVDEDKKNFERLQDLIDKLQQK- 1886
Query: 879 LPTLRNLVAQINETFSRNFQE 899
L T + V + E + N Q+
Sbjct: 1887 LKTQKKQVEEAEELANLNLQK 1907
Score = 95 (38.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 67/375 (17%), Positives = 153/375 (40%)
Query: 644 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKR------REMENHINLRKRKLESIEKE 696
+Q ++ IE E L+K+ +++ +++ + E K+ R +++ + + + + KE
Sbjct: 948 VQRAKKKIEAEVEALKKQIQDLEMSLRKAESEKQSKDHQIRSLQDEMQQQDEAIAKLNKE 1007
Query: 697 ----DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 752
++IN L + + D Q K +++ L ++ S + A + D +
Sbjct: 1008 KKHQEEINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLED---SLEREKRARADLDKQK 1064
Query: 753 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP 812
R++E LK ++ ++ D + ++ L + E + +L+++ +
Sbjct: 1065 RKVEGELKIAQENIDESGRQRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIKDGQ 1124
Query: 813 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEADKK 862
+ I ELE +++ + ++ +E E ++++ ++ K+EA+
Sbjct: 1125 SRISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEVNKKREAELA 1184
Query: 863 ELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVA-GEVSLDEHESDFDKFGIL 921
+L+R L E + E L LR + ++ A +V D+ ++ D +
Sbjct: 1185 KLRRDLEEANMNHENQLGGLRKKHTDAVAELTDQLDQLNKAKAKVEKDKAQAVRDAEDLA 1244
Query: 922 IKVKFRQSGQL--EVLSAHHQSG-GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPIN 978
++ SG+L E L+ + E LQD T+ R+ E + +
Sbjct: 1245 AQLDQETSGKLNNEKLAKQFELQLTELQSKADEQSRQLQDFTSLKGRLHSENGDLVRQLE 1304
Query: 979 ERK-MFQQLVRAASQ 992
+ + QL R SQ
Sbjct: 1305 DAESQVNQLTRLKSQ 1319
Score = 94 (38.1 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 59/298 (19%), Positives = 120/298 (40%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRK-------RREMENHINLRKRKLESIEKEDDIN 700
QR +E+ KL ++ V++ K++ RR++E + +L + K+
Sbjct: 1152 QRELEELGEKLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKH--T 1209
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
A+A+L DQ LN + K + + + ++ + + ++ E L
Sbjct: 1210 DAVAELTDQLDQLNKAKAKVEKDKAQAVRDAEDLAAQLDQETSGKLNNEKLAKQFELQLT 1269
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
+ + A + S +D D RQ E +L + ++ + +EE
Sbjct: 1270 ELQSKADEQSRQLQDFTSLKGRLHSENGDLVRQLEDAESQVNQLTRLKSQLTSQLEEARR 1329
Query: 821 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEAD-KKELKRFLAEIDALKEKWL 879
+ + ++ +N Y+H Q+++ S ++E + K E+ R L++ +A ++W
Sbjct: 1330 TADEEARERQTVAAQAKN----YQHEAEQLQE-SLEEEIEGKNEILRQLSKANADIQQWK 1384
Query: 880 PTLRN---LVA-QINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLE 933
L A ++ + R Q++ E +LD S K L K K R G L+
Sbjct: 1385 ARFEGEGLLKADELEDAKRRQAQKINELQE-ALDAANS---KNASLEKTKSRLVGDLD 1438
Score = 93 (37.8 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 62/291 (21%), Positives = 123/291 (42%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRK-RREMENHINLRKRKLESIEKEDDINTALAKL 706
Q +++ A L+ E +++ Q+E + R E+E I ++ + E+ K N A A L
Sbjct: 1553 QHALDEAEAALEAEESKVLR-AQVEVSQIRSEIEKRIQEKEEEFENTRK----NHARA-L 1606
Query: 707 VDQAADLNIQQFKYA--IEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 764
A L + A + IK L ++ + A H DA + NLK++++
Sbjct: 1607 ESMQASLETEAKGKAELLRIKKKLEGDIN-ELEIALDHANKANADA-----QKNLKRYQE 1660
Query: 765 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPEL--EKEFLEMPTTIEELEAA- 821
+ L E+ ++ R+ +A+++A + EL E E E EAA
Sbjct: 1661 QVRELQLQVEEEQRNGADTREQFFNAEKRATLLQSEKEELLVANEAAERARKQAEYEAAD 1720
Query: 822 IQDNISQAN----SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
+D ++AN S+ + + E + +++ + +A ++ K+ +A+ L E+
Sbjct: 1721 ARDQANEANAQVSSLTSAKRKLEGEIQAIHADLDETLNEYKAAEERSKKAIADATRLAEE 1780
Query: 878 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQ 928
+ +Q + + ++ +V LDE E+ K G + K Q
Sbjct: 1781 LRQEQEH--SQHVDRLRKGLEQQLKEIQVRLDEAEAAALKGGKKVIAKLEQ 1829
Score = 86 (35.3 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 48/221 (21%), Positives = 95/221 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQI-EKRKRREMENHINLRKRKLESIEKEDDINTA 702
+ + +R +E E + + +E +N + E+R ++ + + L + + E ++
Sbjct: 1735 LTSAKRKLEGEIQAIHADLDETLNEYKAAEERSKKAIADATRLAEELRQEQEHSQHVDR- 1793
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 762
L K ++Q Q K EI+ L E + +K +A +E ++RELE L
Sbjct: 1794 LRKGLEQ-------QLK---EIQVRLDEAEAAALKGGKKVIAKLE--QRVRELESELDGE 1841
Query: 763 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 822
++ ++D K +L A R+ + F E +K F + I++L+ +
Sbjct: 1842 QR-------RFQDANK-------NLGRADRRVRELQFQVDEDKKNFERLQDLIDKLQQKL 1887
Query: 823 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 863
+ Q L LQ+Y+ Q+ED ++ AD+ E
Sbjct: 1888 KTQKKQVEEAEELANLNLQKYKQLTHQLED--AEERADQAE 1926
Score = 82 (33.9 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 49/248 (19%), Positives = 102/248 (41%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 711
E A LQ E+EE++ + +R R++ E E+ + D N A A Q +
Sbjct: 1687 EKRATLLQSEKEELLVANEAAERARKQAE---------YEAADARDQANEANA----QVS 1733
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL 771
L + K EI+ + ++ Y S + A L L+Q ++ +
Sbjct: 1734 SLTSAKRKLEGEIQAIHADLDETLNEYKAAEERSKKAIADATRLAEELRQEQEHSQHVDR 1793
Query: 772 HYEDCKKEVEHCRKHLSDAKRQA-ESIAFITPELEKEFLEMPTTIEELEAAIQD---NIS 827
+ +++++ + L +A+ A + + +LE+ E+ + ++ + QD N+
Sbjct: 1794 LRKGLEQQLKEIQVRLDEAEAAALKGGKKVIAKLEQRVRELESELDGEQRRFQDANKNLG 1853
Query: 828 QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVA 887
+A+ Q + E + +++DL K + K K+ + E + L L + L
Sbjct: 1854 RADRRVRELQFQVDEDKKNFERLQDLIDKLQQKLKTQKKQVEEAEELANLNLQKYKQLTH 1913
Query: 888 QINETFSR 895
Q+ + R
Sbjct: 1914 QLEDAEER 1921
Score = 79 (32.9 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 45/233 (19%), Positives = 93/233 (39%)
Query: 645 QTEQRLIEDEA-AKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
+ + R D A + LQ+E EE+ + E+ + +N +KR+ E + D+ A
Sbjct: 1137 ERQSRSKADRAKSDLQRELEELGEKLD-EQGGATAAQVEVN-KKREAELAKLRRDLEEAN 1194
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
+Q L + E+ + L ++ K + EK A DA+ +L L Q
Sbjct: 1195 MNHENQLGGLRKKHTDAVAELTDQLDQLNKAK-AKVEKDKAQAVRDAE--DLAAQLDQET 1251
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
L + + ++ + + RQ + + L E ++ +E+ E
Sbjct: 1252 SGKLNNEKLAKQFELQLTELQSKADEQSRQLQDFTSLKGRLHSENGDLVRQLEDAE---- 1307
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 876
SQ N + L + + E +R ++ + +++ + K + E + L+E
Sbjct: 1308 ---SQVNQLTRLKSQLTSQLEEARRTADEEARERQTVAAQAKNYQHEAEQLQE 1357
Score = 47 (21.6 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 391 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN 450
Q+ + E L + + L S RL+D + +KL +++ G I E L+ R +
Sbjct: 1084 QRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIKD-GQSRISELEEELENERQSRS 1142
Query: 451 K 451
K
Sbjct: 1143 K 1143
Score = 41 (19.5 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 370 KIEKLGSQIL----ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDR 412
K+EK +Q + +L Q +Q+ K EK+ Q +L L + +
Sbjct: 1228 KVEKDKAQAVRDAEDLAAQLDQETSGKLNNEKLAKQFELQLTELQSK 1274
>UNIPROTKB|P35580 [details] [associations]
symbol:MYH10 "Myosin-10" species:9606 "Homo sapiens"
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001778 "plasma membrane repair"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006887 "exocytosis"
evidence=IEA] [GO:0006930 "substrate-dependent cell migration, cell
extension" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0008360
"regulation of cell shape" evidence=IEA] [GO:0016460 "myosin II
complex" evidence=IEA] [GO:0021592 "fourth ventricle development"
evidence=IEA] [GO:0021670 "lateral ventricle development"
evidence=IEA] [GO:0021678 "third ventricle development"
evidence=IEA] [GO:0021680 "cerebellar Purkinje cell layer
development" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043197 "dendritic spine" evidence=IEA]
[GO:0050885 "neuromuscular process controlling balance"
evidence=IEA] [GO:0055003 "cardiac myofibril assembly"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IEA] [GO:0016459 "myosin complex"
evidence=NAS] [GO:0003779 "actin binding" evidence=NAS] [GO:0005524
"ATP binding" evidence=IDA;NAS] [GO:0030496 "midbody" evidence=IDA]
[GO:0032154 "cleavage furrow" evidence=IDA] [GO:0001725 "stress
fiber" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000146 "microfilament motor activity"
evidence=IDA] [GO:0000281 "cytokinesis after mitosis" evidence=IDA]
[GO:0030048 "actin filament-based movement" evidence=IDA]
[GO:0030898 "actin-dependent ATPase activity" evidence=IDA]
[GO:0043531 "ADP binding" evidence=IDA] [GO:0051015 "actin filament
binding" evidence=IDA] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612
Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 GO:GO:0005886 GO:GO:0005524
GO:GO:0005938 Reactome:REACT_111045 GO:GO:0007411 GO:GO:0001764
EMBL:CH471108 GO:GO:0005819 GO:GO:0008360 GO:GO:0008283
GO:GO:0030424 GO:GO:0043025 GO:GO:0001701 GO:GO:0043197
GO:GO:0031594 GO:GO:0050885 GO:GO:0051015 GO:GO:0043531
GO:GO:0030426 GO:GO:0060041 GO:GO:0000281 GO:GO:0000146
GO:GO:0001725 GO:GO:0055003 GO:GO:0006887 GO:GO:0007512
GO:GO:0030496 GO:GO:0032154 GO:GO:0030048 GO:GO:0021670
GO:GO:0007097 eggNOG:COG5022 GO:GO:0055015 GO:GO:0021680
GO:GO:0016459 GO:GO:0001778 GO:GO:0006930 GO:GO:0021678
GO:GO:0021592 GO:GO:0016460 GO:GO:0030898 CTD:4628
HOGENOM:HOG000173958 HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1
SUPFAM:SSF50084 EMBL:M69181 EMBL:AB210026 EMBL:AC011061
EMBL:AC025518 EMBL:AC026130 EMBL:BC008968 EMBL:BC117690
EMBL:BC117691 EMBL:U15618 EMBL:S67247 IPI:IPI00397526
IPI:IPI00479307 IPI:IPI00790503 PIR:A59252 PIR:I65769
RefSeq:NP_001242941.1 RefSeq:NP_005955.3 UniGene:Hs.16355
ProteinModelPortal:P35580 SMR:P35580 DIP:DIP-31110N IntAct:P35580
MINT:MINT-1133516 STRING:P35580 PhosphoSite:P35580 DMDM:215274129
PaxDb:P35580 PRIDE:P35580 Ensembl:ENST00000269243
Ensembl:ENST00000360416 Ensembl:ENST00000396239 GeneID:4628
KEGG:hsa:4628 UCSC:uc002gll.3 GeneCards:GC17M008318
H-InvDB:HIX0013525 HGNC:HGNC:7568 HPA:CAB017180 MIM:160776
neXtProt:NX_P35580 PharmGKB:PA31366 PhylomeDB:P35580 ChiTaRS:MYH10
GenomeRNAi:4628 NextBio:17814 ArrayExpress:P35580 Bgee:P35580
CleanEx:HS_MYH10 Genevestigator:P35580 GermOnline:ENSG00000133026
Uniprot:P35580
Length = 1976
Score = 129 (50.5 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 62/271 (22%), Positives = 124/271 (45%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-EDDINTAL 703
+ ++RL+ + +L+ E E+ + +++ME + + ++E+ K D++ L
Sbjct: 1588 EEKKRLLIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQL 1647
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
KL Q D ++ +E + + + +EK + S+E A+I +L+ L E
Sbjct: 1648 RKLQAQMKD-----YQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSE 1700
Query: 764 KLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELE 819
+ A ++ E+ + + L D KR+ E+ IA + ELE+E + +E L
Sbjct: 1701 RARRHAEQERDELADEITNSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLN 1756
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKW 878
+ Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+
Sbjct: 1757 DRFRKTTLQVDT---LNAELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKF 1812
Query: 879 LPTLRNL---VAQINETFSRNFQEMAVAGEV 906
T+ L + Q+ E + +E A A ++
Sbjct: 1813 KATISALEAKIGQLEEQLEQEAKERAAANKL 1843
Score = 110 (43.8 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 51/216 (23%), Positives = 95/216 (43%)
Query: 654 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 711
++A L ++R I Q+E+ E N L R ++ + D +N LA + Q +
Sbjct: 1724 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNAELAAERSAAQKS 1783
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 770
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1784 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1841
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 830
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1842 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1897
Query: 831 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
+ + + +E + E LS + K L+R
Sbjct: 1898 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1930
Score = 73 (30.8 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 41/163 (25%), Positives = 66/163 (40%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + E LE KRF +
Sbjct: 1171 KREQEVAELKKALEEETKNHEAQIQ---DMRQRHATALE----ELSEQLEQAKRFKANLE 1223
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1224 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1281
Query: 202 RNG--DTLNQLKALNVEQEKD-VERVRQRAELLEKVESMKKKL 241
+ + L+ + L E EK ++ + A L +++ ++ L
Sbjct: 1282 ASKLQNELDNVSTLLEEAEKKGIKFAKDAASLESQLQDTQELL 1324
Score = 58 (25.5 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 70/353 (19%), Positives = 128/353 (36%)
Query: 197 ECTVKRNGDTLNQLKALNVE---QEKDVERVRQR-AELLEKVESMKKKLPWLKYDMKKAE 252
E KR + KAL E E ++ +RQR A LE++ ++ K +++K +
Sbjct: 1167 ELRTKREQEVAELKKALEEETKNHEAQIQDMRQRHATALEELSEQLEQAKRFKANLEKNK 1226
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDF 312
L + E K+++ LD ++L + ++E + R++
Sbjct: 1227 Q-----GLETDNKELACEVKVLQQVKAESEHKRKK---LDAQVQELHAKVSEGDRLRVEL 1278
Query: 313 LEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIE 372
EK + K Q + E K+
Sbjct: 1279 AEKASKLQN----ELDNVSTLLEEAEKKGIKFAKDAASLESQLQDTQEL-LQEETRQKLN 1333
Query: 373 KLGSQILELGVQANQKRLQKSEKE---KILNQNKLTLR-QCSDRLKDMEDKNNKLLHALR 428
L S+I +L + N + Q+ E+E K L + L L+ Q +D K ++D + +L
Sbjct: 1334 -LSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQSQLADTKKKVDDDLGTI-ESLE 1391
Query: 429 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQD 488
+ + + +A L Q R E AY LE NR L+D + + +
Sbjct: 1392 EAKKKLLKDAEA-LSQ-RLEEKALAYDK--LE-KTKNRLQQE-LDDLTVDLDHQRQVASN 1445
Query: 489 AGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDA 541
+ L + I + E R E +E +AL ++ L++ +A
Sbjct: 1446 LEKKQKKFDQLLAEEKSISARYAEERDRAEAEAREKETKALSLARALEEALEA 1498
Score = 51 (23.0 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 21/72 (29%), Positives = 31/72 (43%)
Query: 395 KEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA---ENIFEAYCWLQQHRHELNK 451
KE+ QNK LR + L +D K +H L S + + E L++ EL
Sbjct: 1499 KEEFERQNK-QLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQA 1557
Query: 452 EAYGPVLLEVNV 463
+ LEVN+
Sbjct: 1558 TEDAKLRLEVNM 1569
Score = 47 (21.6 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 31/150 (20%), Positives = 69/150 (46%)
Query: 102 KEEHLTIMRKIDTR-----NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
K+E I+ +++R +++ N K + + ++ ++ + + Q L ++V
Sbjct: 917 KQELEEILHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVT 975
Query: 157 EFAKLSPVK----LLEE-TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
AK+ ++ LLE+ K + + +L A E SS+L E K N+ +
Sbjct: 976 AEAKIKKMEEEILLLEDQNSKFIKEKKLMEDRIA--ECSSQLAEEEEKAKNLAKIRNKQE 1033
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + E ER+++ + +++E K+KL
Sbjct: 1034 VMISDLE---ERLKKEEKTRQELEKAKRKL 1060
>UNIPROTKB|F8W6L6 [details] [associations]
symbol:MYH10 "Myosin-10" species:9606 "Homo sapiens"
[GO:0003774 "motor activity" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612
Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 GO:GO:0005524 GO:GO:0003774
GO:GO:0016459 SUPFAM:SSF50084 EMBL:AC011061 EMBL:AC025518
EMBL:AC026130 HGNC:HGNC:7568 ChiTaRS:MYH10 IPI:IPI01025705
ProteinModelPortal:F8W6L6 SMR:F8W6L6 PRIDE:F8W6L6
Ensembl:ENST00000379980 ArrayExpress:F8W6L6 Bgee:F8W6L6
Uniprot:F8W6L6
Length = 1992
Score = 129 (50.5 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 62/271 (22%), Positives = 124/271 (45%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-EDDINTAL 703
+ ++RL+ + +L+ E E+ + +++ME + + ++E+ K D++ L
Sbjct: 1604 EEKKRLLIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQL 1663
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
KL Q D ++ +E + + + +EK + S+E A+I +L+ L E
Sbjct: 1664 RKLQAQMKD-----YQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSE 1716
Query: 764 KLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELE 819
+ A ++ E+ + + L D KR+ E+ IA + ELE+E + +E L
Sbjct: 1717 RARRHAEQERDELADEITNSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLN 1772
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKW 878
+ Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+
Sbjct: 1773 DRFRKTTLQVDT---LNAELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKF 1828
Query: 879 LPTLRNL---VAQINETFSRNFQEMAVAGEV 906
T+ L + Q+ E + +E A A ++
Sbjct: 1829 KATISALEAKIGQLEEQLEQEAKERAAANKL 1859
Score = 110 (43.8 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 51/216 (23%), Positives = 95/216 (43%)
Query: 654 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 711
++A L ++R I Q+E+ E N L R ++ + D +N LA + Q +
Sbjct: 1740 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNAELAAERSAAQKS 1799
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 770
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1800 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1857
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 830
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1858 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1913
Query: 831 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
+ + + +E + E LS + K L+R
Sbjct: 1914 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1946
Score = 73 (30.8 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 41/163 (25%), Positives = 66/163 (40%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + E LE KRF +
Sbjct: 1187 KREQEVAELKKALEEETKNHEAQIQ---DMRQRHATALE----ELSEQLEQAKRFKANLE 1239
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1240 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1297
Query: 202 RNG--DTLNQLKALNVEQEKD-VERVRQRAELLEKVESMKKKL 241
+ + L+ + L E EK ++ + A L +++ ++ L
Sbjct: 1298 ASKLQNELDNVSTLLEEAEKKGIKFAKDAASLESQLQDTQELL 1340
Score = 58 (25.5 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 70/353 (19%), Positives = 128/353 (36%)
Query: 197 ECTVKRNGDTLNQLKALNVE---QEKDVERVRQR-AELLEKVESMKKKLPWLKYDMKKAE 252
E KR + KAL E E ++ +RQR A LE++ ++ K +++K +
Sbjct: 1183 ELRTKREQEVAELKKALEEETKNHEAQIQDMRQRHATALEELSEQLEQAKRFKANLEKNK 1242
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDF 312
L + E K+++ LD ++L + ++E + R++
Sbjct: 1243 Q-----GLETDNKELACEVKVLQQVKAESEHKRKK---LDAQVQELHAKVSEGDRLRVEL 1294
Query: 313 LEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIE 372
EK + K Q + E K+
Sbjct: 1295 AEKASKLQN----ELDNVSTLLEEAEKKGIKFAKDAASLESQLQDTQEL-LQEETRQKLN 1349
Query: 373 KLGSQILELGVQANQKRLQKSEKE---KILNQNKLTLR-QCSDRLKDMEDKNNKLLHALR 428
L S+I +L + N + Q+ E+E K L + L L+ Q +D K ++D + +L
Sbjct: 1350 -LSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQSQLADTKKKVDDDLGTI-ESLE 1407
Query: 429 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQD 488
+ + + +A L Q R E AY LE NR L+D + + +
Sbjct: 1408 EAKKKLLKDAEA-LSQ-RLEEKALAYDK--LE-KTKNRLQQE-LDDLTVDLDHQRQVASN 1461
Query: 489 AGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDA 541
+ L + I + E R E +E +AL ++ L++ +A
Sbjct: 1462 LEKKQKKFDQLLAEEKSISARYAEERDRAEAEAREKETKALSLARALEEALEA 1514
Score = 51 (23.0 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 21/72 (29%), Positives = 31/72 (43%)
Query: 395 KEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA---ENIFEAYCWLQQHRHELNK 451
KE+ QNK LR + L +D K +H L S + + E L++ EL
Sbjct: 1515 KEEFERQNK-QLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQA 1573
Query: 452 EAYGPVLLEVNV 463
+ LEVN+
Sbjct: 1574 TEDAKLRLEVNM 1585
Score = 47 (21.6 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 31/150 (20%), Positives = 69/150 (46%)
Query: 102 KEEHLTIMRKIDTR-----NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
K+E I+ +++R +++ N K + + ++ ++ + + Q L ++V
Sbjct: 933 KQELEEILHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVT 991
Query: 157 EFAKLSPVK----LLEE-TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
AK+ ++ LLE+ K + + +L A E SS+L E K N+ +
Sbjct: 992 AEAKIKKMEEEILLLEDQNSKFIKEKKLMEDRIA--ECSSQLAEEEEKAKNLAKIRNKQE 1049
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + E ER+++ + +++E K+KL
Sbjct: 1050 VMISDLE---ERLKKEEKTRQELEKAKRKL 1076
>UNIPROTKB|E1C294 [details] [associations]
symbol:Gga.55054 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0001932 "regulation of
protein phosphorylation" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0043621 "protein self-association" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR008636 Pfam:PF05622 GO:GO:0005737 GO:GO:0000226
GO:GO:0051260 GO:GO:0001932 GO:GO:0031648
GeneTree:ENSGT00690000101702 OMA:KEQHQSM EMBL:AADN02003644
EMBL:AADN02003645 EMBL:AADN02003646 EMBL:AADN02003647
EMBL:AADN02003648 IPI:IPI00574848 Ensembl:ENSGALT00000017436
ArrayExpress:E1C294 Uniprot:E1C294
Length = 2028
Score = 130 (50.8 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 55/242 (22%), Positives = 107/242 (44%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIIN-IVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
+ TE++L++++ L+ + N I+ ++K+ E++ L+ + + + +++
Sbjct: 1070 LHTEKQLLKEQLKHLETQNVSFNNQILTLQKQNMFLQEHNTALQTQTAKLQVENSTLSSQ 1129
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE-----KHMASIEFDAKIRELEF 757
A L+ Q A L QQ E +NLL + K Y +H+AS+ + + E E
Sbjct: 1130 SASLMAQNALLQNQQTAKENENENLLKQKEQLKAEYESLLQDHEHLASLH-EHQSTEYEL 1188
Query: 758 NLKQHEKL-ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 816
+ QH L L +L E K + L K + + + + + E+E L+
Sbjct: 1189 LINQHSCLKTLHKNLDLEH--KGLGERYNSLMKQKAELDELE-LALKTEREVLQEERRSN 1245
Query: 817 ELEAAIQDNI-SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
+ A + + + + FL+ + EYE ++L T + EL R+ A D LK
Sbjct: 1246 AITAGENQKLREELDRVNFLHSQLKAEYEGLHSHTKELKTSLNNSQLELNRWQARYDELK 1305
Query: 876 EK 877
E+
Sbjct: 1306 EQ 1307
Score = 68 (29.0 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 29/130 (22%), Positives = 58/130 (44%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
L E++ +L+ + T++ + Q++A N + E++ E +R+ E+L KV S K + L
Sbjct: 703 LDEENLELRKVVETMRFTSTKMAQIEAENKDLEREKEDLRKNVEML-KVLSKKSERLELS 761
Query: 246 YDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINEN 305
Y +E + E K ++ + E +L + ++L
Sbjct: 762 YQSINSE-------NQRLQQMLENSNKKIQELEKEVQATESENQVLQRNLEELKI----- 809
Query: 306 SKRRMDFLEK 315
S +R++ LEK
Sbjct: 810 SAKRLERLEK 819
Score = 66 (28.3 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 16/55 (29%), Positives = 34/55 (61%)
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+EK +K+ + TV +N+L+ + +KD ++V+++ +E+VE M+K+L
Sbjct: 589 IEKENKI--LHETVTETSSKVNKLEFEKKQLQKDFDQVKEK---VERVEEMEKEL 638
Score = 58 (25.5 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 181 VQHCALVEKSSKLKTIECTVKRNGDTLNQLKAL--NVEQ-EKDVERV-RQRAELLEKVES 236
+ H + E SSK+ +E K+ +Q+K VE+ EK++ R+ ++ +L +K +
Sbjct: 595 ILHETVTETSSKVNKLEFEKKQLQKDFDQVKEKVERVEEMEKELHRLEKENEQLTKKATA 654
Query: 237 MK 238
MK
Sbjct: 655 MK 656
Score = 57 (25.1 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 363 AYEPPHDKIEKLGSQILELG---VQANQKRLQKSEKE-KILNQNKLTLRQCSDRLKDMED 418
+Y+ + + ++L Q+LE +Q +K +Q +E E ++L +N L+ + RL+ +E
Sbjct: 761 SYQSINSENQRL-QQMLENSNKKIQELEKEVQATESENQVLQRNLEELKISAKRLERLE- 818
Query: 419 KNNKLL 424
K NK L
Sbjct: 819 KENKAL 824
Score = 57 (25.1 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 23/88 (26%), Positives = 49/88 (55%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKDVER 223
++LE + K + + + VQ A ++ L + +E +K + L +L+ N E+++ +
Sbjct: 774 QMLENSNKKIQELEKEVQ--ATESENQVLQRNLE-ELKISAKRLERLEKENKALEQEISQ 830
Query: 224 VRQRAELLEKVESMKKKLPWLKYDMKKA 251
+ + +LLEK E+ K+L W + ++K A
Sbjct: 831 LEKDKKLLEK-ET--KRL-WQQVELKDA 854
Score = 52 (23.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKK 250
QL N+E K VE +R + + ++E+ K L K D++K
Sbjct: 702 QLDEENLELRKVVETMRFTSTKMAQIEAENKDLEREKEDLRK 743
Score = 50 (22.7 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 389 RLQKSEKE-KILNQNKLTLRQCSDRLKDMEDKNNKLL 424
+L +EKE K L + R S++LK+ E N L+
Sbjct: 862 KLAVAEKENKTLEKEIAQFRDSSNKLKEFEKDNKDLI 898
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 388 KRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 434
K Q + K L + K LR+ + LK + K+ +L + ++ +EN
Sbjct: 723 KMAQIEAENKDLEREKEDLRKNVEMLKVLSKKSERLELSYQSINSEN 769
Score = 37 (18.1 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 393 SEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKE 452
S+K + L + ++ + RL+ M + +NK + L E LQ++ EL
Sbjct: 752 SKKSERLELSYQSINSENQRLQQMLENSNKKIQELEKEVQATESENQV-LQRNLEELKIS 810
Query: 453 A 453
A
Sbjct: 811 A 811
>WB|WBGene00021469 [details] [associations]
symbol:Y39G10AR.11 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] GO:GO:0009792 GeneTree:ENSGT00700000104127
EMBL:FO081209 RefSeq:NP_490953.1 ProteinModelPortal:Q95XR6
PaxDb:Q95XR6 EnsemblMetazoa:Y39G10AR.11.1
EnsemblMetazoa:Y39G10AR.11.2 EnsemblMetazoa:Y39G10AR.11.3
GeneID:171785 KEGG:cel:CELE_Y39G10AR.11 UCSC:Y39G10AR.11.3
CTD:171785 WormBase:Y39G10AR.11 eggNOG:NOG283431
HOGENOM:HOG000017423 InParanoid:Q95XR6 OMA:QNINDEL NextBio:872689
Uniprot:Q95XR6
Length = 788
Score = 115 (45.5 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 65/293 (22%), Positives = 135/293 (46%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLV 707
+RL E +L +++EI+ + + + +R E ++ K+ + + + E + L + +
Sbjct: 477 RRLSEQRREELAAKKDEILKLNSLCELQRMEKVEWLSDLKKDVNAWKNETSVRIELKQKI 536
Query: 708 DQAADLNIQQFKYAIEIKNLLVEIVS-CKWSYAEKHMASIEFDA-KIR----------EL 755
DL Q +++N+L + S C+ Y + ++S++ D ++R E+
Sbjct: 537 ---TDLEEQNEGLEEKVENVLAQYRSECEL-Y-QNSVSSLQMDRDRLRKDVDLYKGKAEI 591
Query: 756 EFN-----LKQH---EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE 807
F +K + EK A Q L ++ +K VE +++ K A + E E+
Sbjct: 592 LFTKFGDLVKTNDELEKKAHQKMLEADNLRKTVEFSNMEMTNVK------ALMAMEREQI 645
Query: 808 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHR-QRQIEDLSTKQEADKKELKR 866
E +T+ +LE ++ N++ +SI N+N+L E R ED + EA + + R
Sbjct: 646 LEERHSTVRDLEEKLK-NLTMTSSI---NKNLLAEARRSIARLTEDAKEQSEAQEFDRLR 701
Query: 867 FLAEIDALKEKWLPTLRNLVAQINETFSRN--FQEMAVAGEVSLDEHESDFDK 917
+ ++D LKE +NL ++ E+ + + + + S D +S+ D+
Sbjct: 702 WNDQVDQLKEVNEELKKNLGVEVLESSDDSDCSSDSSSDSDCSSDSSDSEEDE 754
Score = 73 (30.8 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 431
E+L S G++A+QK Q++E KI N+ L+ + ++++ED N+ L L G
Sbjct: 203 ERLKSSSKPSGIRADQKMFQENEM-KIQELNR-KLKDALEAIEEIEDANSALRVDLERRG 260
Query: 432 AE 433
E
Sbjct: 261 VE 262
Score = 54 (24.1 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 373 KLGSQILELGVQANQKRLQ-KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 431
KL E Q ++ ++ +++KE ILN K + + ++RL+++ +L + + SG
Sbjct: 154 KLTEHFKEAETQLRRENVKLEAQKEDILNHTKNSEKMWNERLENITADFERLKSSSKPSG 213
Query: 432 AENIFEAYCWLQQHRHELNKE 452
+ + + ELN++
Sbjct: 214 IRADQKMFQENEMKIQELNRK 234
Score = 52 (23.4 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
+ SS L+ ++ +L AL + E ++ERVR E VE ++KKL + +
Sbjct: 12 QTSSSLERRVTELQDENKSLRLTLALRTDCEHELERVRN--ETHPGVEELEKKLASAENE 69
Query: 248 MKKAE 252
++ E
Sbjct: 70 IRVME 74
Score = 47 (21.6 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 17/74 (22%), Positives = 37/74 (50%)
Query: 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ 226
+EE EK + + ++ ++E ++K + T+ D L ++ + KDV+ + +
Sbjct: 56 VEELEKKLASAENEIR---VMESTNK--ELMATLATTRDQLGKMLRERNQLVKDVDELHE 110
Query: 227 RAELLEKVESMKKK 240
+EK+ES+ K
Sbjct: 111 E---IEKMESLYNK 121
>TAIR|locus:2096334 [details] [associations]
symbol:AT3G05130 "AT3G05130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC009177
HSSP:P17676 IPI:IPI00545448 RefSeq:NP_187164.1 UniGene:At.65065
ProteinModelPortal:Q9MAA6 SMR:Q9MAA6 PRIDE:Q9MAA6
EnsemblPlants:AT3G05130.1 GeneID:819675 KEGG:ath:AT3G05130
TAIR:At3g05130 HOGENOM:HOG000153259 InParanoid:Q9MAA6 OMA:TINSERA
PhylomeDB:Q9MAA6 ProtClustDB:CLSN2684463 Genevestigator:Q9MAA6
Uniprot:Q9MAA6
Length = 634
Score = 131 (51.2 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 53/236 (22%), Positives = 102/236 (43%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE-KEDDINTALAK 705
E+ LIE + L + + ++ R++ E+E I R+RKL + K D++ A+A
Sbjct: 349 EKNLIEKQMEMLNVQSSDKGKLIDQLSREKVELEERIFSRERKLVELNRKADELTHAVAV 408
Query: 706 LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 765
L D K + ++ L + + E A E +L+ + + EK+
Sbjct: 409 LQKNCDDQTKINGKLSCKVDQLSNALAQVELRREEADKALDEEKRNGEDLKAEVLKSEKM 468
Query: 766 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD- 824
+ E K E + +D + Q+ES+ +LEKE +E+ +E L+ ++
Sbjct: 469 VAKTLEELEKVKIERKSLFSAKNDLESQSESLKSENVKLEKELVELRKAMEALKTELESA 528
Query: 825 NISQANSIFFLNQ--NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEK 877
+ S+ L ++L + E+R+ ++ K+E + L I+ A K K
Sbjct: 529 GMDAKRSMVMLKSAASMLSQLENREDRLISEEQKREIGTEPYAMELESIEKAFKNK 584
Score = 61 (26.5 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
V KGE +E+T + I+ L +VC+ L + E+ + V+ L
Sbjct: 149 VLKGEAIELTGKVEIEKEQLR------KVCDERDLIKNGFDLQHEEVNRLKECVVR---L 199
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKV-ESMKKKLPWLK 245
EK S L+ + ++ + L +K V +E ++E V++ LEK+ E K ++ LK
Sbjct: 200 EEKESNLEIVIGKLESENERL--VKERKVREE-EIEGVKKEKIGLEKIMEEKKNEIDGLK 256
Query: 246 YDMK 249
++K
Sbjct: 257 REIK 260
Score = 54 (24.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 16/77 (20%), Positives = 42/77 (54%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
K+ EE + V ++ ++ + EK +++ ++ +K N+++ + +EQ+ +E +
Sbjct: 225 KVREEEIEGVKKEKIGLEKI-MEEKKNEIDGLKREIKVLLSEKNEMEIVKIEQKGVIEEL 283
Query: 225 RQRAELL-EKVESMKKK 240
++ + L E V S+ K+
Sbjct: 284 ERKLDKLNETVRSLTKE 300
>UNIPROTKB|Q27991 [details] [associations]
symbol:MYH10 "Myosin-10" species:9913 "Bos taurus"
[GO:0006930 "substrate-dependent cell migration, cell extension"
evidence=ISS] [GO:0006887 "exocytosis" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0001778 "plasma membrane repair"
evidence=ISS] [GO:0001764 "neuron migration" evidence=ISS]
[GO:0001725 "stress fiber" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0055015
"ventricular cardiac muscle cell development" evidence=IEA]
[GO:0055003 "cardiac myofibril assembly" evidence=IEA] [GO:0051015
"actin filament binding" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0043531 "ADP
binding" evidence=IEA] [GO:0043197 "dendritic spine" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032154
"cleavage furrow" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030898 "actin-dependent ATPase
activity" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030048 "actin filament-based movement"
evidence=IEA] [GO:0021680 "cerebellar Purkinje cell layer
development" evidence=IEA] [GO:0021678 "third ventricle
development" evidence=IEA] [GO:0021670 "lateral ventricle
development" evidence=IEA] [GO:0021592 "fourth ventricle
development" evidence=IEA] [GO:0016460 "myosin II complex"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007512 "adult
heart development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IEA]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0000146
"microfilament motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 InterPro:IPR008989
Pfam:PF00063 Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005886
GO:GO:0005524 GO:GO:0005938 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0005819 GO:GO:0008360 GO:GO:0008283
GO:GO:0030424 GO:GO:0043025 GO:GO:0001701 GO:GO:0043197
GO:GO:0031594 GO:GO:0050885 GO:GO:0043531 GO:GO:0030426
GO:GO:0060041 GO:GO:0000281 GO:GO:0000146 GO:GO:0001725
GO:GO:0055003 GO:GO:0006887 GO:GO:0007512 GO:GO:0030496
GO:GO:0032154 GO:GO:0030048 GO:GO:0021670 GO:GO:0007097
eggNOG:COG5022 GO:GO:0055015 GO:GO:0021680 GO:GO:0001778
GO:GO:0006930 GO:GO:0021678 GO:GO:0021592 GO:GO:0016460
GO:GO:0030898 EMBL:AB022023 EMBL:U15716 IPI:IPI00709219
RefSeq:NP_777259.1 UniGene:Bt.4057 UniGene:Bt.92698
ProteinModelPortal:Q27991 SMR:Q27991 STRING:Q27991 PRIDE:Q27991
Ensembl:ENSBTAT00000028188 GeneID:317655 KEGG:bta:317655 CTD:4628
GeneTree:ENSGT00650000092896 HOGENOM:HOG000173958
HOVERGEN:HBG004704 InParanoid:Q27991 KO:K10352 OMA:DKNVHEL
OrthoDB:EOG4TXBR1 NextBio:20807131 SUPFAM:SSF50084 Uniprot:Q27991
Length = 1976
Score = 129 (50.5 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 62/271 (22%), Positives = 124/271 (45%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-EDDINTAL 703
+ ++RL+ + +L+ E E+ + +++ME + + ++E+ K D++ L
Sbjct: 1588 EEKKRLLIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQL 1647
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
KL Q D ++ +E + + + +EK + S+E A+I +L+ L E
Sbjct: 1648 RKLQAQMKD-----YQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSE 1700
Query: 764 KLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELE 819
+ A ++ E+ + + L D KR+ E+ IA + ELE+E + +E L
Sbjct: 1701 RARRHAEQERDELADEIANSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLN 1756
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKW 878
+ Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+
Sbjct: 1757 DRFRKTTLQVDT---LNTELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKF 1812
Query: 879 LPTLRNL---VAQINETFSRNFQEMAVAGEV 906
T+ L + Q+ E + +E A A ++
Sbjct: 1813 KATISALEAKIGQLEEQLEQEAKERAAANKL 1843
Score = 115 (45.5 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 52/216 (24%), Positives = 96/216 (44%)
Query: 654 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 711
++A L ++R I Q+E+ E N L R ++ + D +NT LA + Q +
Sbjct: 1724 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNTELAAERSAAQKS 1783
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 770
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1784 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1841
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 830
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1842 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1897
Query: 831 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
+ + + +E + E LS + K L+R
Sbjct: 1898 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1930
Score = 76 (31.8 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 42/163 (25%), Positives = 66/163 (40%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + E LE KRF +
Sbjct: 1171 KREQEVAELKKALEEETKSHEAQIQ---DMRQRHATALE----ELSEQLEQAKRFKANLE 1223
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1224 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1281
Query: 202 RNG--DTLNQLKALNVEQEKD-VERVRQRAELLEKVESMKKKL 241
N + L+ + L E EK ++ + A L +++ ++ L
Sbjct: 1282 ANKLQNELDNVSTLLEEAEKKGIKFAKDAAGLESQLQDTQELL 1324
Score = 47 (21.6 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 20/72 (27%), Positives = 31/72 (43%)
Query: 395 KEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA---ENIFEAYCWLQQHRHELNK 451
+E+ QNK LR + L +D K +H L S + + E L++ EL
Sbjct: 1499 REEAERQNK-QLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQA 1557
Query: 452 EAYGPVLLEVNV 463
+ LEVN+
Sbjct: 1558 TEDAKLRLEVNM 1569
>RGD|1308791 [details] [associations]
symbol:Smc1b "structural maintenance of chromosomes 1B"
species:10116 "Rattus norvegicus" [GO:0000775 "chromosome,
centromeric region" evidence=IEA;ISO] [GO:0000795 "synaptonemal
complex" evidence=ISO] [GO:0000800 "lateral element"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA;ISO]
[GO:0007126 "meiosis" evidence=IEA;ISO] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030893 "meiotic cohesin complex"
evidence=ISO] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA;ISO] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:1308791 GO:GO:0005524 GO:GO:0007126 GO:GO:0000775
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0000800 EMBL:CH473950 GO:GO:0007062 SUPFAM:SSF75553
GO:GO:0030893 KO:K06636 GeneTree:ENSGT00580000081569 CTD:27127
OMA:QLYHNEK OrthoDB:EOG4RNB7M IPI:IPI00372956 RefSeq:NP_001123970.1
UniGene:Rn.56972 Ensembl:ENSRNOT00000044883 GeneID:300121
KEGG:rno:300121 NextBio:646377 Uniprot:D3ZE73
Length = 1247
Score = 103 (41.3 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 71/387 (18%), Positives = 168/387 (43%)
Query: 645 QTEQRLIEDEAAK--LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
Q +++L + + K +QK RE+I N+ + E+ + +E + +++ +++ + N
Sbjct: 827 QLKKKLNKIDTLKTTIQKGREDIDNLKKTEEECLKIVEE-LMVKQEQVKEVLATQSSN-- 883
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMA--SIEFDAKIRELEFNLK 760
+ K+ Q + + E+ L E+V + S +K + ++ D K+++++ +L
Sbjct: 884 IEKIHIQIEEERKKFLAVDREVGKLQKEVVIIQGSLEQKQLEKHNLLLDCKVQDIDISLM 943
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF--LEMPTTIE-E 817
+L+ + E E E + +D + SI L +++ L+ +E
Sbjct: 944 LG---SLEDIIEVE--LTETESTQA-TADIYEKEASIQIDYSPLREDWKALQSDKEVEAH 997
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQR---QIEDLSTKQEADKKELKRFLAEIDAL 874
L +Q SQ N++ L+ E+ + + ++ + EA +KE + E + +
Sbjct: 998 LTLLLQQVASQENTLLKTAAPNLRAQENLKAVRDKFQESADAFEASRKEARICRQEFEQV 1057
Query: 875 KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQSGQLE 933
K + I+ + + ++++ + E+ + + I G+
Sbjct: 1058 KRRRYDAFSQCFEHISVSIDQIYKKLCRNNSAQAFLSPENPEEPYLDGISYNCVAPGK-R 1116
Query: 934 VLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQP 993
+ + SGGE+ V+ + L ++ PF V+DE++ +D N K+ ++ SQ
Sbjct: 1117 FMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKV-SGYIKEQSQE 1175
Query: 994 NTPQCFLLTPKLLPDLEYSEACSILNI 1020
Q +++ L + YS A +++ +
Sbjct: 1176 QF-QMIIIS---LKEEFYSRADALIGV 1198
Score = 99 (39.9 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 73/278 (26%), Positives = 122/278 (43%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRR---EMENHINLRKRKLESIEKEDDINTALAK 705
R E++ K Q+E ++ ++ EK+K R ++E N K+KL I D + T + K
Sbjct: 790 REFENKHVKQQQENDQ--KRLEFEKQKTRLNIQLEYSRNQLKKKLNKI---DTLKTTIQK 844
Query: 706 LVDQAADLNIQQFKYAIEIKNLLV------EIVSCKWSYAEKHMASIEFDAK---IRELE 756
+ +L + + ++ L+V E+++ + S EK IE + K + E
Sbjct: 845 GREDIDNLKKTEEECLKIVEELMVKQEQVKEVLATQSSNIEKIHIQIEEERKKFLAVDRE 904
Query: 757 FNLKQHEKLALQASLHYEDCKKEVEHCRKH--LSDAKRQAESIAFITPELEKEFLEMPTT 814
Q E + +Q SL +K++E KH L D K Q I+ + LE + +E+ T
Sbjct: 905 VGKLQKEVVIIQGSLE----QKQLE---KHNLLLDCKVQDIDISLMLGSLE-DIIEVELT 956
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 874
E A D I+ +I +Y + + L + +E + L L ++ +
Sbjct: 957 ETESTQATAD-------IYEKEASIQIDYSPLREDWKALQSDKEVEA-HLTLLLQQVASQ 1008
Query: 875 KEKWLPTLR-NLVAQINETFSRN-FQEMAVAGEVSLDE 910
+ L T NL AQ N R+ FQE A A E S E
Sbjct: 1009 ENTLLKTAAPNLRAQENLKAVRDKFQESADAFEASRKE 1046
Score = 98 (39.6 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 63/279 (22%), Positives = 113/279 (40%)
Query: 21 GNIIEIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
G++ + + NF ++ + P R +IGPNGSGKS+++ A++ +G T L R +
Sbjct: 2 GHLELLLVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKTTNL-RVKN 60
Query: 80 I-----GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVL 133
I GA++ K S + I D+ EE T R I SE+ F K V + +
Sbjct: 61 IQELIHGAHIGKPVSSSASVTIIYVEDSGEEK-TFTRII-RGGCSEFHFGDKPVSRSVYV 118
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
+ I V + Q V + P + + E+ + ++ A +K K
Sbjct: 119 AQLENIGIIVKAQNCLVFQGTVESISMKKPKERTQFFEEISTSGEFIGEYEAKKKKLQKA 178
Query: 194 KT-IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ + R + + K +E+E + E + E L K ++ L L Y+ +K
Sbjct: 179 EEDAQFHFNRKKNVAAERKHAKIEKE-EAEHYQSLLEEL-KTNKIQLMLFQLYYNEEKIN 236
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAIL 291
+ +TL I+ KK++ +L
Sbjct: 237 VLNTELEHMDRNLSVVK--DTLSHHENIIKAKKKDYGML 273
Score = 45 (20.9 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 16/70 (22%), Positives = 35/70 (50%)
Query: 364 YEPPHDKIEKLGSQILELG-VQANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKN 420
+E +K E+L + G Q N K++++ E +K + + + + C D L+D + +
Sbjct: 398 WEQKAEK-ERLAFERRRHGDTQGNLKQIKEQIEEHKKRIEKLEEYTKTCMDCLEDKKQQE 456
Query: 421 NKLLHALRNS 430
L+ + N+
Sbjct: 457 EALIKEIDNT 466
Score = 37 (18.1 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 7/44 (15%), Positives = 25/44 (56%)
Query: 391 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 434
+K ++E ++ + + R+ ++ ++ + + + L+N+G +N
Sbjct: 452 KKQQEEALIKE----IDNTKSRMSEVNEELSLIRNELQNAGIDN 491
>UNIPROTKB|F1P3L8 [details] [associations]
symbol:CENPF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] InterPro:IPR019513
Pfam:PF10473 GeneTree:ENSGT00700000104127 InterPro:IPR018302
Pfam:PF10490 EMBL:AADN02012085 EMBL:AADN02012086 IPI:IPI00589215
Ensembl:ENSGALT00000038504 ArrayExpress:F1P3L8 Uniprot:F1P3L8
Length = 1538
Score = 125 (49.1 bits), Expect = 9.4e-06, Sum P(3) = 9.4e-06
Identities = 58/240 (24%), Positives = 120/240 (50%)
Query: 652 EDEAAKLQK-EREEII--NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KL 706
ED A +++ ERE I N+++ K ++ + + L+S+EK D ++ L KL
Sbjct: 722 EDSAKTIRRLEREVKIQTNLLETAKSDTDQLSGEKDHLLQNLQSLEK-DALSFRLEEEKL 780
Query: 707 VDQAADLN-----IQQFKYAIEIKNLLVEIVSCKWS-YAEKHMASI-EFDAKIRELEFNL 759
+Q ADLN + + ++ K +EI + K S Y + + E A++ + +
Sbjct: 781 QNQVADLNKEKEVLMRESEMMQSKLSALEIENSKLSRYLDGLITEKRELAARLNSAQKEV 840
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
Q + + + E +++ H + L + +R+++++ LE+E LEM E LE
Sbjct: 841 NQMREGMEKLKIKIESDERKKRHIAEKLKENERKSDALLDKVERLERE-LEMSE--ENLE 897
Query: 820 -AAIQDNISQANSIFFLNQN--ILQEYEHRQRQIEDLSTKQEA---DKKELKRFLAEIDA 873
A +Q ++A + F+ + + ++ + Q QI+DL++++E D KE + + E+++
Sbjct: 898 DAVVQLETAKAEAETFITEKEEMAEKLKCLQSQIDDLTSQKECLAKDSKEKQERILELES 957
Score = 107 (42.7 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 66/272 (24%), Positives = 121/272 (44%)
Query: 661 EREEIINIVQIE-KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFK 719
+ E+ I+ +Q E +R+++ I L + E + + D++ +++ + L Q K
Sbjct: 1170 DAEQAISKLQEEFTMERKKLAEQIQLLQEHSE--QNKIDLHLVVSEKHELTKSLGAVQ-K 1226
Query: 720 YAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKE 779
E +N++ +S Y +K + E +E + LK+ + + + E C+++
Sbjct: 1227 ELQEKENIMKREIS---KYQDK-LLQTE-----KEHQNALKEANR---KNEIQIEACQEK 1274
Query: 780 VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI 839
V +S K + E + EL E T+ EL DNI N+I LN+
Sbjct: 1275 VNSLECFISSQKLEIEHLNSTKEELNNSLKEANQTLGELLKLKADNI---NTIVQLNKE- 1330
Query: 840 LQEYEHRQRQIEDLSTKQ-EADKKELKRFLAEIDAL-KEKWLPTLRNLVAQ---INETFS 894
+E+ + Q+ S KQ E +K+ L++ LA+ + L K+K L I E
Sbjct: 1331 -KEFVQSEVQLWIKSCKQMEQEKEVLQKQLADCEELLKKKDLSVSEKEGTDENAITEEIK 1389
Query: 895 RNFQEMAVAGEVSLDEHESDFDKFGILIKVKF 926
+E+ A EV E + +K+ LI VK+
Sbjct: 1390 LELEELQEAVEVKTREANENLEKYCSLI-VKY 1420
Score = 68 (29.0 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 41/219 (18%), Positives = 93/219 (42%)
Query: 365 EPPHDKIEKLGSQILELGVQAN----QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN 420
E K E++ + L V+ N Q + Q+ E+++ +N + ++L + +
Sbjct: 628 EQRQTKSEQVNMETHALFVEGNAEILQAKCQQLERDREINLQTIP-SSLQEQLVSVTAER 686
Query: 421 NKL--LHALRNSGAENIFEAYCWLQQHRHEL--NKEAYGPVLLEVNVSNRAHANYLEDHV 476
N + ++ + + + + Y LQ+ EL NKE + + + N LE
Sbjct: 687 NHIGQEQSVLSENKKELGQEYQKLQEKLKELETNKEDSAKTIRRLEREVKIQTNLLETA- 745
Query: 477 GHYIWKSFITQDAGDRDFLAKNLKPFDVPILNY-VSNESSRKEPFQISEEMRALGISARL 535
KS Q +G++D L +NL+ + L++ + E + + +++E L + +
Sbjct: 746 -----KSDTDQLSGEKDHLLQNLQSLEKDALSFRLEEEKLQNQVADLNKEKEVLMRESEM 800
Query: 536 DQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK 574
Q + ++ +S++ LD +E + ++ K
Sbjct: 801 MQSKLSALEIENSKLSRY-LDGLITEKRELAARLNSAQK 838
Score = 62 (26.9 bits), Expect = 9.4e-06, Sum P(3) = 9.4e-06
Identities = 25/110 (22%), Positives = 45/110 (40%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSD-----RLKDMEDKNNKL-- 423
+ LG + ++ + N + S L+ +LT C D ++ + K+ ++
Sbjct: 580 VVSLGKEPEKISAKHNVNKTVLSNTTDTLDDIELTKGNCHDLFLGAEIEQRQTKSEQVNM 639
Query: 424 -LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYL 472
HAL G I +A C + E+N + L E VS A N++
Sbjct: 640 ETHALFVEGNAEILQAKCQQLERDREINLQTIPSSLQEQLVSVTAERNHI 689
Score = 60 (26.2 bits), Expect = 9.4e-06, Sum P(3) = 9.4e-06
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
G +L+ K ++ + +++ P+ R+ E L ++ E+ K + + QL +Q E+
Sbjct: 254 GHILDSVKE--LRSSTPSKYNPEGRIKELEMLC--QIYEKVIKVLQN-QLHIQENMKTEE 308
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEK-DVERVRQRAELLEKVESMKKKLPWLKYDM 248
++K I + +R D L L Q+K + +L E E K L +D+
Sbjct: 309 IQEMKNIMLSERREIDKLQNLSDKKEWQQKLNYLTTEMECKLAE--EGKTKNL---SFDL 363
Query: 249 KKA 251
K A
Sbjct: 364 KTA 366
>UNIPROTKB|F1SS62 [details] [associations]
symbol:MYH1 "Myosin-1" species:9823 "Sus scrofa"
[GO:0031672 "A band" evidence=IEA] [GO:0014704 "intercalated disc"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0005859 "muscle myosin complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003774 "motor activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 Pfam:PF00063 Pfam:PF01576
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0014704 GO:GO:0003774 GO:GO:0031672 GO:GO:0005859
GO:GO:0032982 InterPro:IPR015650 PANTHER:PTHR13140:SF22
GeneTree:ENSGT00680000099790 OMA:QPTEEIS EMBL:CU896583
Ensembl:ENSSSCT00000019599 Uniprot:F1SS62
Length = 1470
Score = 145 (56.1 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 67/314 (21%), Positives = 147/314 (46%)
Query: 644 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
+ ++R +EDE ++L+K+ +++ + + ++EK K EN + ++ +++ T
Sbjct: 471 LTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHAT-ENKVKNLTEEMAGLDETIAKLTK 529
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-ELEFNLKQ 761
K + +A + + + N L + + + S+E + K+R +LE ++
Sbjct: 530 EKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRK 589
Query: 762 HE---KLALQASLHYEDCKKEV-EHCRK---HLSDAKRQAESIAFITPELEKEFLEMPTT 814
E KLA ++++ E+ K+++ E +K +S+ + + E + +L+K+ E+
Sbjct: 590 LEGDLKLAQESTMDIENDKQQLDEKLKKKEFEMSNLQSKIEDEQALAMQLQKKIKELQAR 649
Query: 815 IEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEADKKE 863
IEELE I+ + S+A + ++ +E E ++E+ ++ K+EA+ ++
Sbjct: 650 IEELEEEIEAERASRAKAEK-QRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQK 708
Query: 864 LKRFLAEIDALKEKWLPTLR----NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFG 919
++R L E E TLR + VA++ E N Q + E E + + D
Sbjct: 709 MRRDLEEATLQHEATAATLRKKHADSVAELGEQID-NLQRVKQKLEKEKSEMKMEIDDLA 767
Query: 920 ILIKVKFRQSGQLE 933
++ + G LE
Sbjct: 768 SNMETVSKAKGNLE 781
>WB|WBGene00002348 [details] [associations]
symbol:myo-1 species:6239 "Caenorhabditis elegans"
[GO:0003774 "motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0048017 "inositol
lipid-mediated signaling" evidence=IPI] [GO:0043050 "pharyngeal
pumping" evidence=IPI] [GO:0006936 "muscle contraction"
evidence=IMP] [GO:0005863 "striated muscle myosin thick filament"
evidence=IDA] [GO:0008307 "structural constituent of muscle"
evidence=IDA] InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 SMART:SM00242 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0043050 GO:GO:0006936
GO:GO:0008307 GO:GO:0003774 eggNOG:COG5022 EMBL:Z71266
GO:GO:0005863 GO:GO:0048017 GeneTree:ENSGT00650000092896 KO:K10352
HOGENOM:HOG000173959 EMBL:X08065 EMBL:Z71261 EMBL:M37232
EMBL:M37234 PIR:T21193 RefSeq:NP_492053.1 ProteinModelPortal:P02567
SMR:P02567 DIP:DIP-24827N MINT:MINT-1102984 STRING:P02567
PaxDb:P02567 EnsemblMetazoa:R06C7.10.1 EnsemblMetazoa:R06C7.10.2
GeneID:172471 KEGG:cel:CELE_R06C7.10 UCSC:R06C7.10.1 CTD:172471
WormBase:R06C7.10 InParanoid:P02567 OMA:TEDARSD NextBio:875649
Uniprot:P02567
Length = 1938
Score = 125 (49.1 bits), Expect = 9.8e-06, Sum P(3) = 9.8e-06
Identities = 58/265 (21%), Positives = 116/265 (43%)
Query: 657 KLQKEREEIINIVQIEKRKRREM-ENHINLRKRKLESIEKEDDINTALAKLVDQAADLNI 715
KL + +E+ V E+R+R E+ EN++ KR ++ + +D+ + L I
Sbjct: 1652 KLFDQVKELQGQVDDEQRRREEIRENYLAAEKRLAIALSESEDLAHRIEASDKHKKQLEI 1711
Query: 716 QQFKYAIEIKNLLVEIVSCKWSY-AEKHMASIEFDAKIRELE--FN-LKQHEKLALQASL 771
+Q E+K+ E++ + A K E EL+ N LK E+ A +A+
Sbjct: 1712 EQ----AELKSSNTELIGNNAALSAMKRKVENEVQIARNELDEYLNELKASEERARKAAA 1767
Query: 772 HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA----IQDNIS 827
+ +EV ++H RQ +S+ EL+ + + + + A ++D +
Sbjct: 1768 DADRLAEEVRQEQEHAVHVDRQRKSLELNAKELQAKIDDAERAMIQFGAKALAKVEDRVR 1827
Query: 828 QANSIFFLNQNILQE----YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 883
+ Q QE Y ++R+ +L + E DKK R ++ L++K + +
Sbjct: 1828 SLEAELHSEQRRHQESIKGYTKQERRARELQFQVEEDKKAFDRLQENVEKLQQK-IRVQK 1886
Query: 884 NLVAQINETFSRN---FQEMAVAGE 905
+ + E ++N F+++ +A E
Sbjct: 1887 RQIEEAEEVATQNLSKFRQIQLALE 1911
Score = 111 (44.1 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 50/237 (21%), Positives = 110/237 (46%)
Query: 648 QRLIEDEAAKLQKEREEII-NIVQIEKRKRREMENHINLRKRKLES----IEKEDDINTA 702
++ +E E A+L+ E+I N + KR+ +EN + + + +L+ ++ ++
Sbjct: 1706 KKQLEIEQAELKSSNTELIGNNAALSAMKRK-VENEVQIARNELDEYLNELKASEERARK 1764
Query: 703 LAKLVDQAADLNIQQFKYAIEI----KNLLVEIVSCKWSYAEKHMASIEFDAK-IRELEF 757
A D+ A+ Q+ ++A+ + K+L + + + A I+F AK + ++E
Sbjct: 1765 AAADADRLAEEVRQEQEHAVHVDRQRKSLELNAKELQAKIDDAERAMIQFGAKALAKVED 1824
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
++ +L+A LH E ++ E + + +R+A + F E +K F + +E+
Sbjct: 1825 RVR-----SLEAELHSEQ-RRHQESIKGYTKQ-ERRARELQFQVEEDKKAFDRLQENVEK 1877
Query: 818 LEAAIQ---DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 871
L+ I+ I +A + QN L ++ Q +E+ + E + L R ++
Sbjct: 1878 LQQKIRVQKRQIEEAEEV--ATQN-LSKFRQIQLALENAEERAEVAENSLVRMRGQV 1931
Score = 110 (43.8 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 63/351 (17%), Positives = 149/351 (42%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRK-RREMENHINLRKRKLESIEKE-----DDINT 701
Q +++ A L+ E +++ + QIE ++ R E+E I ++ + E+ K + I
Sbjct: 1548 QHALDEAEAALEAEESKVLRL-QIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESIQA 1606
Query: 702 ALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 761
+L A+L + K +I L + + +A K A+++ +++L +K+
Sbjct: 1607 SLETEAKSKAELARAKKKLETDINQLEIAL-----DHANK--ANVDAQKNLKKLFDQVKE 1659
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
+ E+ ++ K L+ A ++E +A +K ++ EL+++
Sbjct: 1660 LQGQVDDEQRRREEIRENYLAAEKRLAIALSESEDLAHRIEASDKHKKQLEIEQAELKSS 1719
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
+ I ++ + + + E + + ++++ + +A ++ ++ A+ D L E+
Sbjct: 1720 NTELIGNNAALSAMKRKVENEVQIARNELDEYLNELKASEERARKAAADADRLAEEVRQE 1779
Query: 882 LRNLVA--QINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHH 939
+ V + ++ N +E+ + +D+ E +FG K + ++ L A
Sbjct: 1780 QEHAVHVDRQRKSLELNAKEL----QAKIDDAERAMIQFGA--KALAKVEDRVRSLEAEL 1833
Query: 940 QSGGERSVSTIL-YLVSLQDLTNCPFRVVDEINQGMDPINER-KMFQQLVR 988
S R +I Y + F+V +E + D + E + QQ +R
Sbjct: 1834 HSEQRRHQESIKGYTKQERRARELQFQV-EEDKKAFDRLQENVEKLQQKIR 1883
Score = 77 (32.2 bits), Expect = 9.8e-06, Sum P(3) = 9.8e-06
Identities = 38/159 (23%), Positives = 73/159 (45%)
Query: 158 FAKLSPV--KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNV 215
+AKLS KLLE E G A+ EK ++L + V+++ + N + +
Sbjct: 884 YAKLSAERSKLLEALELTQGGS------AAIEEKLTRLNSARQEVEKSLNDANDRLSEHE 937
Query: 216 EQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLH 275
E+ D+E+ R++A+ ++VE++KK + + ++ K+ N +H
Sbjct: 938 EKNADLEKQRRKAQ--QEVENLKKSIEAVDGNLAKS------------LEEKAAKENQIH 983
Query: 276 EFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLE 314
E Q++ I G K L+ EN+++ +D L+
Sbjct: 984 SLQD--EMNSQDETI--GKINKEKKLLEENNRQLVDDLQ 1018
Score = 68 (29.0 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 36/146 (24%), Positives = 69/146 (47%)
Query: 108 IMRKIDTRNK--SEWF--FNGKVVPKGEVLEITKRFNI-QVNNLTQFLP--QDRVCEFAK 160
I R++ N S+W + G+ + E LE KR + +V +L + L Q++V K
Sbjct: 1364 IQRQLSRINSEISQWKARYEGEGLVGSEELEELKRKQMNRVMDLQEALSAAQNKVISLEK 1423
Query: 161 LSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL--KTIECTVKRNGDTLNQLKALNVEQE 218
KLL ETE A D + A +EK + K ++ ++ D ++ A +
Sbjct: 1424 AKG-KLLAETEDARSDVDRHLTVIASLEKKQRAFDKIVDDWKRKVDDIQKEIDATTRDSR 1482
Query: 219 K---DVERVRQRAE-LLEKVESMKKK 240
+V ++R + L E++E+++++
Sbjct: 1483 NTSTEVFKLRSSMDNLSEQIETLRRE 1508
Score = 48 (22.0 bits), Expect = 9.8e-06, Sum P(3) = 9.8e-06
Identities = 12/60 (20%), Positives = 31/60 (51%)
Query: 360 TVPAYEPPHDKIEK----LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD 415
T+ A + KIEK L ++ ++ Q +Q+ + E+E++ Q ++ + + ++ +
Sbjct: 1213 TLDALQKSKAKIEKEKGVLQKELDDINAQVDQETKSRVEQERLAKQYEIQVAELQQKVDE 1272
Score = 48 (22.0 bits), Expect = 9.8e-06, Sum P(3) = 9.8e-06
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 431
E+L Q +L +Q + + + SE K D++ + KNN + AL N+
Sbjct: 1155 ERLDEQNKQLEIQQDNNKKKDSEIIKFRRDLDEKNMANEDQMAMIRRKNNDQISALTNT- 1213
Query: 432 AENIFEAYCWLQQHRHELNKE 452
+ + ++ +++ + L KE
Sbjct: 1214 LDALQKSKAKIEKEKGVLQKE 1234
Score = 38 (18.4 bits), Expect = 9.5e-05, Sum P(3) = 9.5e-05
Identities = 13/59 (22%), Positives = 26/59 (44%)
Query: 399 LNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA------ENIFEAYCWLQQHRHELNK 451
+ Q T ++ ++ +E + ++L HAL + A + +QQ R E+ K
Sbjct: 1523 ITQGGRTYQEVHKSVRRLEQEKDELQHALDEAEAALEAEESKVLRLQIEVQQIRSEIEK 1581
>UNIPROTKB|D4ABD7 [details] [associations]
symbol:Trip11 "Protein Trip11" species:10116 "Rattus
norvegicus" [GO:0000042 "protein targeting to Golgi" evidence=IEA]
InterPro:IPR000237 PROSITE:PS50913 RGD:1586166 GO:GO:0005634
GO:GO:0005794 GeneTree:ENSGT00700000104188 GO:GO:0000042
OrthoDB:EOG4229HV IPI:IPI00368110 ProteinModelPortal:D4ABD7
Ensembl:ENSRNOT00000007061 ArrayExpress:D4ABD7 Uniprot:D4ABD7
Length = 1976
Score = 129 (50.5 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 81/364 (22%), Positives = 150/364 (41%)
Query: 653 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES--IEKEDDINTALAKLVDQA 710
D+ K+++ + +Q E ++ R+ E +N ++L +E ED D+
Sbjct: 1544 DQVMLALKQKQMETSTLQNEVQRLRDKEARLNQELQRLRDHLLESEDSHTREALAAEDRE 1603
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS 770
A L K ++ LV S H AS++ ++ +L KQ ++ ALQ S
Sbjct: 1604 AKLR----KKVSVLEEKLVS--SSNAMENASHQASVQVESLQEQLNMVSKQRDETALQLS 1657
Query: 771 LHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEKE---FLEMPTTIEELEA---AIQ 823
+ E K+ + + Q E A + ELEK+ E E LE ++Q
Sbjct: 1658 VSQEQVKQYAMSLTNLQMVLEHFQQEEKAMYSAELEKQNQLLTEWKKKAESLEGKVLSLQ 1717
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 883
+ + +AN+ + ++ + ++ QIE+L + E ++ L DA K K + +
Sbjct: 1718 ERLDEANAALDSASRLTEQLDLKEEQIEELKKQNELHQEMLD------DAQK-KLMSLVN 1770
Query: 884 NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGG 943
+ ++++ RN + HE G ++ VK R+ ++E L A Q G
Sbjct: 1771 STEGKVDKVLMRNLF-IGHFHTPKNQRHEV-LRLMGSILGVK-RE--EMEQLFAEDQGGV 1825
Query: 944 ERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTP 1003
R ++ L S + + N P R Q + + ++F + + S P+ P L
Sbjct: 1826 TRWMAGWLGGGS-KSVPNTPLR---PNQQSVFNSSFSELFVKFLETESHPSVPPPKLSVH 1881
Query: 1004 KLLP 1007
L P
Sbjct: 1882 DLKP 1885
Score = 72 (30.4 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 25/101 (24%), Positives = 56/101 (55%)
Query: 160 KLSPVKLLEETEKAVGD-----PQLPVQHCAL-VEKSSKLKTIECTVKRNGDTLNQLKAL 213
K+ ++ L+E +KA+ + Q+ + H L +EK ++K ++ T++ Q+KA
Sbjct: 923 KMQLLQSLQEQKKAMDEFKYQHEQMSITHSRLFLEKDEEIKNLQKTIE-------QIKAQ 975
Query: 214 NVEQEKDVERVRQRAELLE--KVESMKKKLPWLKYDMKKAE 252
E+ +D + + +++ + KV+S+ ++ K+D+ KAE
Sbjct: 976 LQEERQDSQT--ENSDIFQETKVQSLNIEIGSEKHDLSKAE 1014
Score = 55 (24.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 38/143 (26%), Positives = 63/143 (44%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL 161
KE+ L I K D + S F KV + E+L V NL ++R+ ++
Sbjct: 1407 KEKDLLIKAKSDQLHSSNENFANKV-SENELLRQA------VTNL-----KERIL-ILEM 1453
Query: 162 SPVKLLEETEKAV-GDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQ--- 217
KL E EK + ++ AL E + K + + ++ + KAL EQ
Sbjct: 1454 DISKLKGENEKVIEASKGKETEYQALQETNMKFSMMLREKEFECHSMRE-KALAFEQLLK 1512
Query: 218 EKDVERVRQRAELLEKVESMKKK 240
EK+ + + +LL V+SM++K
Sbjct: 1513 EKEQGKAGELNQLLNAVKSMQEK 1535
>UNIPROTKB|F1NI68 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913
SMART:SM00755 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:AADN02001385
EMBL:AADN02001386 IPI:IPI00818295 Ensembl:ENSGALT00000020019
ArrayExpress:F1NI68 Uniprot:F1NI68
Length = 2142
Score = 132 (51.5 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 66/318 (20%), Positives = 152/318 (47%)
Query: 659 QKEREEIINIVQIEKRKR-REMENHINLRKRKLESIEKEDD-INTALAKLVDQAADLNIQ 716
+K EE+ +++ EK++ +E+ + + K +LE+++++ + + T +++ Q + I+
Sbjct: 531 KKRSEELSTLMESEKKQHNKEVSDIVEKHKEELENVKQQQEKLWTEKLQILQQQHVIEIE 590
Query: 717 QF--KYAIEIKNLLVEIVSCKWSYAEK-HMASIE-FDAKIRELE-FNLKQHEKLALQASL 771
+ K EI +L E + ++ E+ + ++E D K ELE + + E L ++ L
Sbjct: 591 KMREKQEQEIDTILKEKETVFRTHIEEMNEKTLEKLDVKQTELETLSSELSEALKVRQDL 650
Query: 772 HYE--DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 829
E + K +V ++ + K +AE E+E E +I+++E +++ ++Q
Sbjct: 651 EQELSELKSKVGEAKQEF-EGKLEAERNQH-KEEVEIMLKEHEISIQDVEKVLKEELNQT 708
Query: 830 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQI 889
+ +L+E + R++++++ + + EA+ ++ L E ++ T Q
Sbjct: 709 KQSLEEKERLLEEAKTREQELKESAQRSEAELVQVSARLMEASLSQQN---TSNEQAKQY 765
Query: 890 NETFSRNFQE-MAVAGE-VSLDEH----ESDFDKFGILIKVKFRQSGQL-EVLSAHHQSG 942
E ++ Q+ M + GE + L E ES ++ +++ Q +L + L
Sbjct: 766 EEELAKLQQKLMDLKGEKLQLSEQLVRTESQLNEVKNELELYISQVHELKQQLQEQSDEN 825
Query: 943 GERSVS-TILYLVSLQDL 959
++ +S T Y L+DL
Sbjct: 826 TQKVMSLTQQYESQLKDL 843
Score = 129 (50.5 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 74/311 (23%), Positives = 149/311 (47%)
Query: 650 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 709
++E++ +++K+ E+ ++I+ + E+E HI + + +S+++E + +
Sbjct: 1428 VLEEKENRIEKQESELTAELKIQAARVAELEEHIAQKTSENDSLKEELKRYHEQKDMEQK 1487
Query: 710 AADLNIQQF-KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHEKLAL 767
+QQ K A E + L E K E + S++ + + +E EF+ +K +
Sbjct: 1488 EVARQLQQAEKVAFEKDSRLKEAEE-KVLNLENEIGSLKAECEAKEREFDQMKSAILKSK 1546
Query: 768 QASLHYEDCKKEVEHCRKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQDNI 826
+ L + + E+ K L+D K++AE I I EL ++ +EE E ++ +
Sbjct: 1547 EEELKELEERLNAENSCK-LADLKKKAEQKIGSIKRELVRQ-------MEEKEQQLKQD- 1597
Query: 827 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEA--DKKELKR-FLAEIDALK---EKWLP 880
+ N + L Q + QE R+ +IE L K ++ D EL+R L +I++ K E+
Sbjct: 1598 -RENQVRHLEQKV-QE---REAKIESLEEKMKSVRDSTELEREMLQKIESTKAAVEQEKN 1652
Query: 881 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGI--LIKVKFRQSGQLEVLS-A 937
+ V Q +E Q+ + L ++ES+ + GI L++++ +Q L+ L A
Sbjct: 1653 EVIKSVQQTHEEKINKLQKDLIEKNKLLQKYESE-QREGIDSLLELQSKQEELLKKLECA 1711
Query: 938 HHQSGGERSVS 948
+ E+SV+
Sbjct: 1712 EKRHREEQSVT 1722
Score = 120 (47.3 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05
Identities = 64/278 (23%), Positives = 128/278 (46%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQ-IEKRKRREMENHINLRKR------KLESIEKE 696
+++ Q+ E++ KLQK+ E ++Q E +R +++ + L+ + KLE EK
Sbjct: 1655 IKSVQQTHEEKINKLQKDLIEKNKLLQKYESEQREGIDSLLELQSKQEELLKKLECAEKR 1714
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 756
++ + + + +L Q KY++ + + + EK S + K++ELE
Sbjct: 1715 HREEQSVTEGLRE--ELEEQAKKYSLLVDEHARCVGDFQKKMQEKDAVSHSLEQKVKELE 1772
Query: 757 FNL-KQHE--KLALQ-ASLHYED----CKKEVEHCRKHLSDAKRQAESIAFITPELEKEF 808
NL K +E K L+ SL YE+ ++++E L + AE A EL+K
Sbjct: 1773 DNLAKVNEVHKTELEDRSLKYEENLKSLQQQLEERNDRLKAFEENAEEKAKSGLELQKLL 1832
Query: 809 LEMPTTIEELEAAIQDNISQANSIFF-LN--QNILQEYEHRQRQIEDLSTKQEADKKELK 865
+M ++L+A +++ + + +N Q L+ +Q D+ K+ ++ E K
Sbjct: 1833 GDMQNQQKDLQAKLEEAEREKQKLRKDVNSLQKDLRTLRKEHQQELDIVKKESLEEMEQK 1892
Query: 866 RFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVA 903
E + ++ K TL+ L+ + N ++ E+ A
Sbjct: 1893 -IRCEQEDIELKHSSTLKQLMREFNTQLAQKEMELETA 1929
Score = 68 (29.0 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 23/103 (22%), Positives = 49/103 (47%)
Query: 142 QVNNLTQFLPQDRVCEFAKLS--PVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECT 199
++++ + L Q++ ++ KL E KA + H A+ + SKL+
Sbjct: 1343 ELSSSVELLRQEKASALEQVDHCTAKLSEWKTKA--QTRFTQNHEAIKDLQSKLEVSNTQ 1400
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLE-KVESMKKKL 241
+ G+ L++LK +Q KD++ ++ E E ++E + +L
Sbjct: 1401 ATKKGEELDKLKEELAQQGKDLDSLKSVLEEKENRIEKQESEL 1443
Score = 66 (28.3 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 33/121 (27%), Positives = 60/121 (49%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
+V+ +T+++ Q+ +L + D+ AK + L E E + + VQ+ + E
Sbjct: 828 KVMSLTQQYESQLKDLQE--EADK----AK----QTLTERENDIEHVK-KVQNEEMEELK 876
Query: 191 SKLKTIECTVKR-NGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
KL E + GD N+LK QE +E+++Q+++ E E+ KKKL + +K
Sbjct: 877 QKLLATEERISTLQGDYENKLK----RQENKMEKMKQKSK--EMQETFKKKLAEQESKLK 930
Query: 250 K 250
K
Sbjct: 931 K 931
Score = 60 (26.2 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDR--VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALV 187
GE ++ + NL + L QD+ V K + LE E+ V QL + +
Sbjct: 286 GEKTKLITQLR-DAKNLIEQLEQDKGMVIAETKRQMHETLEMKEEEVA--QLRARIKQIT 342
Query: 188 EKSSKLKTIECTVKRNGDTLNQL-KALNVEQEKDVERVRQRAELLEKVESMKK 239
+ +LK E K +L KAL + Q + R + +AE+ EK+++++K
Sbjct: 343 TQGEELK--EQKEKFERAAFEELEKALGMAQRTEEARKKLQAEMDEKIKAVEK 393
Score = 58 (25.5 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 31/129 (24%), Positives = 58/129 (44%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLL---EETEKAVGDPQLPVQHC--ALVE 188
E+T R +V + + +DRV E KL ++ +E + + + Q A +E
Sbjct: 405 ELT-RVKQEVVEIMKKSSEDRVAELEKLHKEEMATKDQELNERLQAQEREFQEKMKAALE 463
Query: 189 KSSK--LKTIECTVKRNGDTLNQL----KALNVEQEKDVERVRQRAELLE-KVESMKKKL 241
K+ LKT++ ++ L +L KA+ E +K +E + Q E + ++ ++ L
Sbjct: 464 KNQSECLKTLQEQEQQESLALEELELQKKAIQSECDKKLEEMHQEVETFKTRILELESSL 523
Query: 242 PWLKYDMKK 250
D KK
Sbjct: 524 AKCSQDDKK 532
Score = 58 (25.5 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 47/229 (20%), Positives = 95/229 (41%)
Query: 95 ISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVP-----KGEVLEITKRFNIQVNNLTQF 149
+ +R D ++E + K+ K E F GK+ K EV + K I + ++ +
Sbjct: 644 LKVRQDLEQELSELKSKVGEA-KQE--FEGKLEAERNQHKEEVEIMLKEHEISIQDVEKV 700
Query: 150 LPQDRVCEFAKLSPVKL-LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLN 208
L ++ L+ K LEE E+ + + + Q + S+ + ++ + + +L+
Sbjct: 701 LKEE-------LNQTKQSLEEKERLLEEAKTREQELKESAQRSEAELVQVSARLMEASLS 753
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXX 268
Q N EQ K E + A+L +K+ +K + L + + E
Sbjct: 754 QQNTSN-EQAKQYEE--ELAKLQQKLMDLKGEKLQLSEQLVRTE-----SQLNEVKNELE 805
Query: 269 XXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVD 317
+ +HE + + QE++ D + +K+ SL + + D E+ D
Sbjct: 806 LYISQVHELKQQL----QEQS--DENTQKVMSLTQQYESQLKDLQEEAD 848
Score = 56 (24.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 22/90 (24%), Positives = 38/90 (42%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS-----DRLKDMEDKNNKLLHA 426
+KL Q +L + K+L+ S+KE N L + S D + +E + L +
Sbjct: 920 KKLAEQESKLKKELENKQLEFSQKESEFNAKMLEMAHASSAGINDAVSKLESNQKEQLES 979
Query: 427 LRNSGAENIFE-AYCW---LQQHRHELNKE 452
L + + E + W L Q EL ++
Sbjct: 980 LAEAHKRELEEISRSWEKKLNQQAEELQEK 1009
Score = 52 (23.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 16/72 (22%), Positives = 36/72 (50%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL--HAL 427
+++KL + + + + + Q S ++ I ++K + + +D+LK +E+K L H+
Sbjct: 1083 QLQKLEGDLSQSLKEKSGLQEQISRQKAIEEKDKARITELADKLKTLEEKLQTLQSSHSK 1142
Query: 428 RNSGAENIFEAY 439
E EA+
Sbjct: 1143 DRENYEKKIEAF 1154
Score = 52 (23.4 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 19/91 (20%), Positives = 45/91 (49%)
Query: 365 EPPHDKIEKLGSQILELG---VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN 421
E H ++E ++ILEL + +Q ++SE+ L +++ +Q + + D+ +K+
Sbjct: 503 EEMHQEVETFKTRILELESSLAKCSQDDKKRSEELSTLMESEK--KQHNKEVSDIVEKHK 560
Query: 422 KLLHALRNSGAENIFEAYCWLQQHRHELNKE 452
+ L ++ E ++ + Q +H + E
Sbjct: 561 EELENVKQQ-QEKLWTEKLQILQQQHVIEIE 590
Score = 51 (23.0 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 32/144 (22%), Positives = 65/144 (45%)
Query: 100 DTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFA 159
D E+H + + + + W +++ + V+EI K Q + L +++ F
Sbjct: 554 DIVEKHKEELENVKQQQEKLWTEKLQILQQQHVIEIEKMREKQEQEIDTIL-KEKETVFR 612
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDT-LNQLKAL--NVE 216
+ E EK + +L V+ L SS+L V+++ + L++LK+ +
Sbjct: 613 ----THIEEMNEKTL--EKLDVKQTELETLSSELSEA-LKVRQDLEQELSELKSKVGEAK 665
Query: 217 QEKDVERVRQRAELLEKVESMKKK 240
QE + + +R + E+VE M K+
Sbjct: 666 QEFEGKLEAERNQHKEEVEIMLKE 689
Score = 48 (22.0 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 14/57 (24%), Positives = 32/57 (56%)
Query: 379 LELGVQANQKRLQKSEK--EKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
+E+ ++ ++ +Q EK ++ LNQ K +L + L++ + + +L + + S AE
Sbjct: 683 VEIMLKEHEISIQDVEKVLKEELNQTKQSLEEKERLLEEAKTREQELKESAQRSEAE 739
Score = 48 (22.0 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 18/86 (20%), Positives = 42/86 (48%)
Query: 164 VKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNG--DTLNQLKALNVEQEKDV 221
VK LE + V + +Q C + +S K + + T ++ + L + + +E+ KD+
Sbjct: 225 VKTLETLNQRVKRQENLLQRCKEMIRSHKERCAQLTNEKEALQEQLEE-RLQELEKMKDL 283
Query: 222 ERVRQRAELLEKVESMKKKLPWLKYD 247
+ ++ +L+ ++ K + L+ D
Sbjct: 284 H-MGEKTKLITQLRDAKNLIEQLEQD 308
Score = 44 (20.5 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
EL QK +++ E + L Q + + RLK+ E+K L + + + AE
Sbjct: 1474 ELKRYHEQKDMEQKEVARQLQQAEKVAFEKDSRLKEAEEKVLNLENEIGSLKAE 1527
Score = 42 (19.8 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLR----QCSDRLKDMEDKNNKLLH 425
++EKL + + Q +RLQ E+E + K L +C L++ E + + L
Sbjct: 427 ELEKLHKEEMATKDQELNERLQAQERE-FQEKMKAALEKNQSECLKTLQEQEQQESLALE 485
Query: 426 AL 427
L
Sbjct: 486 EL 487
Score = 42 (19.8 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 382 GVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLH--ALRNSGAENIFEA 438
G N+ + Q+++ EK+ ++K +L + E K K L L S E+ F A
Sbjct: 891 GDYENKLKRQENKMEKMKQKSKEMQETFKKKLAEQESKLKKELENKQLEFSQKESEFNA 949
>UNIPROTKB|F1NMQ0 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 SMART:SM00755
GO:GO:0005794 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:AADN02001385
EMBL:AADN02001386 IPI:IPI00579194 Ensembl:ENSGALT00000037470
OMA:AQEVESE ArrayExpress:F1NMQ0 Uniprot:F1NMQ0
Length = 2150
Score = 132 (51.5 bits), Expect = 0.00049, Sum P(3) = 0.00048
Identities = 66/318 (20%), Positives = 152/318 (47%)
Query: 659 QKEREEIINIVQIEKRKR-REMENHINLRKRKLESIEKEDD-INTALAKLVDQAADLNIQ 716
+K EE+ +++ EK++ +E+ + + K +LE+++++ + + T +++ Q + I+
Sbjct: 536 KKRSEELSTLMESEKKQHNKEVSDIVEKHKEELENVKQQQEKLWTEKLQILQQQHVIEIE 595
Query: 717 QF--KYAIEIKNLLVEIVSCKWSYAEK-HMASIE-FDAKIRELE-FNLKQHEKLALQASL 771
+ K EI +L E + ++ E+ + ++E D K ELE + + E L ++ L
Sbjct: 596 KMREKQEQEIDTILKEKETVFRTHIEEMNEKTLEKLDVKQTELETLSSELSEALKVRQDL 655
Query: 772 HYE--DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 829
E + K +V ++ + K +AE E+E E +I+++E +++ ++Q
Sbjct: 656 EQELSELKSKVGEAKQEF-EGKLEAERNQH-KEEVEIMLKEHEISIQDVEKVLKEELNQT 713
Query: 830 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQI 889
+ +L+E + R++++++ + + EA+ ++ L E ++ T Q
Sbjct: 714 KQSLEEKERLLEEAKTREQELKESAQRSEAELVQVSARLMEASLSQQN---TSNEQAKQY 770
Query: 890 NETFSRNFQE-MAVAGE-VSLDEH----ESDFDKFGILIKVKFRQSGQL-EVLSAHHQSG 942
E ++ Q+ M + GE + L E ES ++ +++ Q +L + L
Sbjct: 771 EEELAKLQQKLMDLKGEKLQLSEQLVRTESQLNEVKNELELYISQVHELKQQLQEQSDEN 830
Query: 943 GERSVS-TILYLVSLQDL 959
++ +S T Y L+DL
Sbjct: 831 TQKVMSLTQQYESQLKDL 848
Score = 129 (50.5 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 74/311 (23%), Positives = 149/311 (47%)
Query: 650 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 709
++E++ +++K+ E+ ++I+ + E+E HI + + +S+++E + +
Sbjct: 1433 VLEEKENRIEKQESELTAELKIQAARVAELEEHIAQKTSENDSLKEELKRYHEQKDMEQK 1492
Query: 710 AADLNIQQF-KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHEKLAL 767
+QQ K A E + L E K E + S++ + + +E EF+ +K +
Sbjct: 1493 EVARQLQQAEKVAFEKDSRLKEAEE-KVLNLENEIGSLKAECEAKEREFDQMKSAILKSK 1551
Query: 768 QASLHYEDCKKEVEHCRKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQDNI 826
+ L + + E+ K L+D K++AE I I EL ++ +EE E ++ +
Sbjct: 1552 EEELKELEERLNAENSCK-LADLKKKAEQKIGSIKRELVRQ-------MEEKEQQLKQD- 1602
Query: 827 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEA--DKKELKR-FLAEIDALK---EKWLP 880
+ N + L Q + QE R+ +IE L K ++ D EL+R L +I++ K E+
Sbjct: 1603 -RENQVRHLEQKV-QE---REAKIESLEEKMKSVRDSTELEREMLQKIESTKAAVEQEKN 1657
Query: 881 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGI--LIKVKFRQSGQLEVLS-A 937
+ V Q +E Q+ + L ++ES+ + GI L++++ +Q L+ L A
Sbjct: 1658 EVIKSVQQTHEEKINKLQKDLIEKNKLLQKYESE-QREGIDSLLELQSKQEELLKKLECA 1716
Query: 938 HHQSGGERSVS 948
+ E+SV+
Sbjct: 1717 EKRHREEQSVT 1727
Score = 119 (46.9 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 59/262 (22%), Positives = 117/262 (44%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQI-EKRKRREMENHINLRKRKLESIEKEDDINTAL 703
++EQR D +LQ ++EE++ ++ EKR R E LR+ +LE K+ +
Sbjct: 1689 ESEQREGIDSLLELQSKQEELLKKLECAEKRHREEQSVTEGLRE-ELEEQAKKYSL---- 1743
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF-NLKQH 762
LVD+ A F+ ++ K+ + + K E ++A + + ELE +LK
Sbjct: 1744 --LVDEHARCGGGDFQKKMQEKDAVSHSLEQKVKELEDNLAKVN-EVHKTELEDRSLKYE 1800
Query: 763 EKL-ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
E L +LQ L E+ ++ ++ + + + + +++ + ++ +EE E
Sbjct: 1801 ENLKSLQQQL--EERNDRLKAFEENAEEKAKSGLELQKLLGDMQNQQKDLQAKLEEAERE 1858
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
Q NS+ Q L+ +Q D+ K+ ++ E K E + ++ K T
Sbjct: 1859 KQKLRKDVNSL----QKDLRTLRKEHQQELDIVKKESLEEMEQK-IRCEQEDIELKHSST 1913
Query: 882 LRNLVAQINETFSRNFQEMAVA 903
L+ L+ + N ++ E+ A
Sbjct: 1914 LKQLMREFNTQLAQKEMELETA 1935
Score = 68 (29.0 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 23/103 (22%), Positives = 49/103 (47%)
Query: 142 QVNNLTQFLPQDRVCEFAKLS--PVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECT 199
++++ + L Q++ ++ KL E KA + H A+ + SKL+
Sbjct: 1348 ELSSSVELLRQEKASALEQVDHCTAKLSEWKTKA--QTRFTQNHEAIKDLQSKLEVSNTQ 1405
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLE-KVESMKKKL 241
+ G+ L++LK +Q KD++ ++ E E ++E + +L
Sbjct: 1406 ATKKGEELDKLKEELAQQGKDLDSLKSVLEEKENRIEKQESEL 1448
Score = 66 (28.3 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 33/121 (27%), Positives = 60/121 (49%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
+V+ +T+++ Q+ +L + D+ AK + L E E + + VQ+ + E
Sbjct: 833 KVMSLTQQYESQLKDLQE--EADK----AK----QTLTERENDIEHVK-KVQNEEMEELK 881
Query: 191 SKLKTIECTVKR-NGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
KL E + GD N+LK QE +E+++Q+++ E E+ KKKL + +K
Sbjct: 882 QKLLATEERISTLQGDYENKLK----RQENKMEKMKQKSK--EMQETFKKKLAEQESKLK 935
Query: 250 K 250
K
Sbjct: 936 K 936
Score = 61 (26.5 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETE-----KAVGDPQ--LPVQH 183
+V E++ + L Q C AKLS K +T +A+ D Q L V +
Sbjct: 1345 QVQELSSSVELLRQEKASALEQVDHCT-AKLSEWKTKAQTRFTQNHEAIKDLQSKLEVSN 1403
Query: 184 CALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVE 235
+K +L ++ + + G L+ LK++ E+E +E+ Q +EL +++
Sbjct: 1404 TQATKKGEELDKLKEELAQQGKDLDSLKSVLEEKENRIEK--QESELTAELK 1453
Score = 60 (26.2 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDR--VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALV 187
GE ++ + NL + L QD+ V K + LE E+ V QL + +
Sbjct: 291 GEKTKLITQLR-DAKNLIEQLEQDKGMVIAETKRQMHETLEMKEEEVA--QLRARIKQIT 347
Query: 188 EKSSKLKTIECTVKRNGDTLNQL-KALNVEQEKDVERVRQRAELLEKVESMKK 239
+ +LK E K +L KAL + Q + R + +AE+ EK+++++K
Sbjct: 348 TQGEELK--EQKEKFERAAFEELEKALGMAQRTEEARKKLQAEMDEKIKAVEK 398
Score = 58 (25.5 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 31/129 (24%), Positives = 58/129 (44%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLL---EETEKAVGDPQLPVQHC--ALVE 188
E+T R +V + + +DRV E KL ++ +E + + + Q A +E
Sbjct: 410 ELT-RVKQEVVEIMKKSSEDRVAELEKLHKEEMATKDQELNERLQAQEREFQEKMKAALE 468
Query: 189 KSSK--LKTIECTVKRNGDTLNQL----KALNVEQEKDVERVRQRAELLE-KVESMKKKL 241
K+ LKT++ ++ L +L KA+ E +K +E + Q E + ++ ++ L
Sbjct: 469 KNQSECLKTLQEQEQQESLALEELELQKKAIQSECDKKLEEMHQEVETFKTRILELESSL 528
Query: 242 PWLKYDMKK 250
D KK
Sbjct: 529 AKCSQDDKK 537
Score = 58 (25.5 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 47/229 (20%), Positives = 95/229 (41%)
Query: 95 ISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVP-----KGEVLEITKRFNIQVNNLTQF 149
+ +R D ++E + K+ K E F GK+ K EV + K I + ++ +
Sbjct: 649 LKVRQDLEQELSELKSKVGEA-KQE--FEGKLEAERNQHKEEVEIMLKEHEISIQDVEKV 705
Query: 150 LPQDRVCEFAKLSPVKL-LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLN 208
L ++ L+ K LEE E+ + + + Q + S+ + ++ + + +L+
Sbjct: 706 LKEE-------LNQTKQSLEEKERLLEEAKTREQELKESAQRSEAELVQVSARLMEASLS 758
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXX 268
Q N EQ K E + A+L +K+ +K + L + + E
Sbjct: 759 QQNTSN-EQAKQYEE--ELAKLQQKLMDLKGEKLQLSEQLVRTE-----SQLNEVKNELE 810
Query: 269 XXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVD 317
+ +HE + + QE++ D + +K+ SL + + D E+ D
Sbjct: 811 LYISQVHELKQQL----QEQS--DENTQKVMSLTQQYESQLKDLQEEAD 853
Score = 56 (24.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 22/90 (24%), Positives = 38/90 (42%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS-----DRLKDMEDKNNKLLHA 426
+KL Q +L + K+L+ S+KE N L + S D + +E + L +
Sbjct: 925 KKLAEQESKLKKELENKQLEFSQKESEFNAKMLEMAHASSAGINDAVSKLESNQKEQLES 984
Query: 427 LRNSGAENIFE-AYCW---LQQHRHELNKE 452
L + + E + W L Q EL ++
Sbjct: 985 LAEAHKRELEEISRSWEKKLNQQAEELQEK 1014
Score = 55 (24.4 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 20/68 (29%), Positives = 32/68 (47%)
Query: 360 TVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 419
T A E +++ K Q E + QK L EK K+L + + R+ D L +++ K
Sbjct: 1648 TKAAVEQEKNEVIKSVQQTHEEKINKLQKDL--IEKNKLLQKYESEQREGIDSLLELQSK 1705
Query: 420 NNKLLHAL 427
+LL L
Sbjct: 1706 QEELLKKL 1713
Score = 53 (23.7 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 388 KRLQKSEKEKILNQNKLTLRQCSDRL-KDMEDKNNKLLHALRNSGAENIFEAYCWLQQHR 446
K + EK +++ + T + ++L KD+ +KN KLL + E I ++ LQ +
Sbjct: 1649 KAAVEQEKNEVIKSVQQTHEEKINKLQKDLIEKN-KLLQKYESEQREGI-DSLLELQSKQ 1706
Query: 447 HELNKE 452
EL K+
Sbjct: 1707 EELLKK 1712
Score = 52 (23.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 16/72 (22%), Positives = 36/72 (50%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL--HAL 427
+++KL + + + + + Q S ++ I ++K + + +D+LK +E+K L H+
Sbjct: 1088 QLQKLEGDLSQSLKEKSGLQEQISRQKAIEEKDKARITELADKLKTLEEKLQTLQSSHSK 1147
Query: 428 RNSGAENIFEAY 439
E EA+
Sbjct: 1148 DRENYEKKIEAF 1159
Score = 52 (23.4 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 19/91 (20%), Positives = 45/91 (49%)
Query: 365 EPPHDKIEKLGSQILELG---VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN 421
E H ++E ++ILEL + +Q ++SE+ L +++ +Q + + D+ +K+
Sbjct: 508 EEMHQEVETFKTRILELESSLAKCSQDDKKRSEELSTLMESEK--KQHNKEVSDIVEKHK 565
Query: 422 KLLHALRNSGAENIFEAYCWLQQHRHELNKE 452
+ L ++ E ++ + Q +H + E
Sbjct: 566 EELENVKQQ-QEKLWTEKLQILQQQHVIEIE 595
Score = 51 (23.0 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 32/144 (22%), Positives = 65/144 (45%)
Query: 100 DTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFA 159
D E+H + + + + W +++ + V+EI K Q + L +++ F
Sbjct: 559 DIVEKHKEELENVKQQQEKLWTEKLQILQQQHVIEIEKMREKQEQEIDTIL-KEKETVFR 617
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDT-LNQLKAL--NVE 216
+ E EK + +L V+ L SS+L V+++ + L++LK+ +
Sbjct: 618 ----THIEEMNEKTL--EKLDVKQTELETLSSELSEA-LKVRQDLEQELSELKSKVGEAK 670
Query: 217 QEKDVERVRQRAELLEKVESMKKK 240
QE + + +R + E+VE M K+
Sbjct: 671 QEFEGKLEAERNQHKEEVEIMLKE 694
Score = 48 (22.0 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 14/57 (24%), Positives = 32/57 (56%)
Query: 379 LELGVQANQKRLQKSEK--EKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 433
+E+ ++ ++ +Q EK ++ LNQ K +L + L++ + + +L + + S AE
Sbjct: 688 VEIMLKEHEISIQDVEKVLKEELNQTKQSLEEKERLLEEAKTREQELKESAQRSEAE 744
Score = 48 (22.0 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 18/86 (20%), Positives = 42/86 (48%)
Query: 164 VKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNG--DTLNQLKALNVEQEKDV 221
VK LE + V + +Q C + +S K + + T ++ + L + + +E+ KD+
Sbjct: 230 VKTLETLNQRVKRQENLLQRCKEMIRSHKERCAQLTNEKEALQEQLEE-RLQELEKMKDL 288
Query: 222 ERVRQRAELLEKVESMKKKLPWLKYD 247
+ ++ +L+ ++ K + L+ D
Sbjct: 289 H-MGEKTKLITQLRDAKNLIEQLEQD 313
Score = 42 (19.8 bits), Expect = 0.00049, Sum P(3) = 0.00048
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLR----QCSDRLKDMEDKNNKLLH 425
++EKL + + Q +RLQ E+E + K L +C L++ E + + L
Sbjct: 432 ELEKLHKEEMATKDQELNERLQAQERE-FQEKMKAALEKNQSECLKTLQEQEQQESLALE 490
Query: 426 AL 427
L
Sbjct: 491 EL 492
Score = 42 (19.8 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 382 GVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLH--ALRNSGAENIFEA 438
G N+ + Q+++ EK+ ++K +L + E K K L L S E+ F A
Sbjct: 896 GDYENKLKRQENKMEKMKQKSKEMQETFKKKLAEQESKLKKELENKQLEFSQKESEFNA 954
>DICTYBASE|DDB_G0290503 [details] [associations]
symbol:DDB_G0290503 species:44689 "Dictyostelium
discoideum" [GO:0005543 "phospholipid binding" evidence=IEA]
InterPro:IPR001849 PROSITE:PS50003 SMART:SM00233
dictyBase:DDB_G0290503 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 eggNOG:NOG12793 EMBL:AAFI02000164
RefSeq:XP_635612.1 HSSP:P11978 ProteinModelPortal:Q54G05
PRIDE:Q54G05 EnsemblProtists:DDB0188916 GeneID:8627684
KEGG:ddi:DDB_G0290503 OMA:FNSKKQQ Uniprot:Q54G05
Length = 1492
Score = 140 (54.3 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 60/262 (22%), Positives = 120/262 (45%)
Query: 646 TEQRLIEDEAAK-LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
T Q +DE+ K L+K+ E++++I + ++ + +N I K++ I+ +++N+
Sbjct: 184 TLQLSSKDESMKSLEKQVEKLVDIEHRSEIEQTKKDNEILKLTEKIKEIQLIENLNSTND 243
Query: 705 KLVDQAADLNIQQFKYAI-EIK---NLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
V+Q + NI++ + ++ EIK N L ++ + EK + + + + +E E N
Sbjct: 244 SKVNQLLEDNIKRLQESLNEIKDENNDLQSLIDTQKQQFEKRINQYQLEIQDKENELNEM 303
Query: 761 QHEKLA----LQASLHYE--DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT 814
+ L+ Q SL D + + L + +S+ I + KE
Sbjct: 304 NQQSLSQVKSFQQSLQQSQLDLENDKNQFSTKLQLVNNEIQSLKSIVDDKLKEIQLKDNQ 363
Query: 815 IEELEAAIQ-DNISQANSIFFLNQNILQ---EYEHRQRQIEDLSTKQEADK-KELKRFLA 869
+ +L + DN I LN NI + + + +I++LS KQ DK KE++ +
Sbjct: 364 LTQLNQQHEIDNNKNNQMILELNDNISKISNQLNEKDNKIQELS-KQSIDKQKEIENSTS 422
Query: 870 EIDALKEKWLPTLRNLVAQINE 891
D L+ K L+ ++N+
Sbjct: 423 SSDQLQLKLNDISNELLEKLND 444
Score = 102 (41.0 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 45/279 (16%), Positives = 123/279 (44%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 703
++ Q +++ +KL +++ EI +++ + E+++ +N + +++ ++ + +N +
Sbjct: 721 IENNQSSLDELQSKLNEKQNEINQLIENNQSSSDELQSKLNEKHQEISELQSK--LNELI 778
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAK----IRELEFNL 759
+ +L + + + E+K ++ S E ++ + EL+ L
Sbjct: 779 ENNESSSDELQSKLIQLSDELKEKDEKLKSLDSIIIENQEKLVQLTKSNQDSLDELQSKL 838
Query: 760 KQHEKLALQASLHYEDCKKEVEH-CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
+ + + + + E++ + ++ E+ + EL+ + E I EL
Sbjct: 839 NEKQNEINELIENNQSSSNELQSKLNEKQNEINLLIENNQSSSDELQSKLNEKHQEINEL 898
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
++ + + ++ N + N++ E + + Q+ D ++E +LK F + I EK
Sbjct: 899 QSKLNEKQNKINELVENNESSSDELQSKLIQLSDQLQEKE---NQLKSFESSIIERDEK- 954
Query: 879 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDK 917
L L +++NE ++ + SLDE +S+ ++
Sbjct: 955 ---LNQLQSKLNEK-QNEIDQITENNQSSLDELQSNLNE 989
Score = 94 (38.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 78/389 (20%), Positives = 160/389 (41%)
Query: 663 EEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAADLNIQQFKY 720
EE I +++ K K +++EN +NL K + EK DDIN KL+ + Q+
Sbjct: 1125 EENIQLIEELKEKLQDLENELNLEKDTVN--EKNDDINELKEEIKLISEKLSEKEQELNE 1182
Query: 721 AI-EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKE 779
I + L EI K + S+ L+ N K +E +L + + + +
Sbjct: 1183 MINDYDESLNEINDQK-----DLVKSLNERLTNAHLKINEKDNEIHSLSKE-GFNEIQSQ 1236
Query: 780 VEHCRKHLSDAKR----QAESIAFITPELEKEFLEMPTT--IEELEAAIQDNISQANSIF 833
+ LS+ +++ I+ + +L + + E ++ + + + I ++S +N
Sbjct: 1237 LNLITNQLSEKDNLLIEKSQIISDLELQLRESYKERSSSSSLHQQQQMISPDLSNSNDEL 1296
Query: 834 FLN-QNILQEYEHRQRQIE----DLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQ 888
+ + I+ E + + +Q+E DL + +K+E + +++ + W + L +
Sbjct: 1297 IVEKEEIINELKEKNQQLEQQLQDLCQQFNKNKQENELKCQQLEEENDGWKNEIDTLNQR 1356
Query: 889 INETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVS 948
+ +T S N + + LD + L K +SG+++ L + ++
Sbjct: 1357 L-KTQSLNTSPDSSELQQQLDIISNQELNIKQLEKELQDKSGKIDNLEYQVEEMNKQ--- 1412
Query: 949 TILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPD 1008
Y + + TN + I +D I E K F + R+ + ++ + D
Sbjct: 1413 ---YHIDINQKTNESSEKLQSIQLEIDTIRE-KYFFAIARSLKLQGAQMGWSMSRSIF-D 1467
Query: 1009 LEYSEACSILNIMNGPWIEQPSKVWSSGE 1037
+ + E S LNI W P +W S +
Sbjct: 1468 M-FDEIKS-LNINFDEW---P--IWISNQ 1489
Score = 92 (37.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 83/389 (21%), Positives = 158/389 (40%)
Query: 76 RATSIGAYVKRGEESGYIK-ISLRGDTKEEHLTIMRK-----IDTRNKSEWFFNGKVVPK 129
R I K+ +E IK ++L+ +K+E + + K +D ++SE K
Sbjct: 166 RTIEIQETTKKEQE---IKSLTLQLSSKDESMKSLEKQVEKLVDIEHRSEIEQTKK---D 219
Query: 130 GEVLEITKRFN-IQ-VNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALV 187
E+L++T++ IQ + NL +V + + +K L+E+ + D +Q
Sbjct: 220 NEILKLTEKIKEIQLIENLNS-TNDSKVNQLLE-DNIKRLQESLNEIKDENNDLQSLIDT 277
Query: 188 EKSSKLKTI---ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAEL-LEKVESM-KKKLP 242
+K K I + ++ + LN++ ++ Q K ++ Q+++L LE ++ KL
Sbjct: 278 QKQQFEKRINQYQLEIQDKENELNEMNQQSLSQVKSFQQSLQQSQLDLENDKNQFSTKLQ 337
Query: 243 WLKYDMKKAEYIXXXXXXXXXXXXXXXXX-NTLHEFSKPIEGKKQEKAILD--GDCKKLS 299
+ +++ + I N HE I+ K + IL+ + K+S
Sbjct: 338 LVNNEIQSLKSIVDDKLKEIQLKDNQLTQLNQQHE----IDNNKNNQMILELNDNISKIS 393
Query: 300 SLINENSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQ 359
+ +NE K+ K K LK
Sbjct: 394 NQLNEKDN-------KIQELSKQSIDKQKEIENSTSSSDQLQ---LKLNDISNELLEKLN 443
Query: 360 TVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQ---N--------KLTLRQ 408
+ +K++ +QILE+ + N+K Q K+ LNQ N KL L Q
Sbjct: 444 DINQLS---NKLQDKENQILEINNKLNEKENQLISKDNQLNQLIENNESSSDELKLKLNQ 500
Query: 409 CSDRLKDMEDK--NNK-LLHALRNSGAEN 434
SD L++ ++K NN+ +++ L+++ EN
Sbjct: 501 LSDELQEKDEKLLNNQSVINELQSNLNEN 529
Score = 92 (37.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 72/306 (23%), Positives = 123/306 (40%)
Query: 681 NHINLRKRKLESIEKEDDINTAL----AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 736
N + + + + + EKE +IN + + L + + LN +Q + I+N +
Sbjct: 699 NQVTVNELQSKLNEKEININQLIENNQSSLDELQSKLNEKQNEINQLIENNQSSSDELQS 758
Query: 737 SYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL-HYEDCKKEVEHCRKHL-SDAKRQA 794
EKH E +K+ EL N + LQ+ L D KE + K L S
Sbjct: 759 KLNEKHQEISELQSKLNELIEN-NESSSDELQSKLIQLSDELKEKDEKLKSLDSIIIENQ 817
Query: 795 ESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQ-EYEHRQRQIEDL 853
E + +T + E+ + + E + I + I S + N LQ + +Q +I L
Sbjct: 818 EKLVQLTKSNQDSLDELQSKLNEKQNEINELIENNQS----SSNELQSKLNEKQNEINLL 873
Query: 854 STKQEADKKELKRFL----AEIDALKEKWLPTLRNLVAQI---NETFSRNFQEMAVAGEV 906
++ EL+ L EI+ L+ K L +N + ++ NE+ S Q +
Sbjct: 874 IENNQSSSDELQSKLNEKHQEINELQSK-LNEKQNKINELVENNESSSDELQSKLIQLSD 932
Query: 907 SLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRV 966
L E E+ F I + + QL+ S ++ E T SL +L +
Sbjct: 933 QLQEKENQLKSFESSIIERDEKLNQLQ--SKLNEKQNEIDQITENNQSSLDELQSNLNEK 990
Query: 967 VDEINQ 972
+EINQ
Sbjct: 991 QNEINQ 996
Score = 78 (32.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 51/238 (21%), Positives = 98/238 (41%)
Query: 89 ESGYIKIS-LRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPK-GEVLEITKRFNIQVNNL 146
+S + ++ L+ E+ + I + I+ S K+ K E+ ++ + + L
Sbjct: 697 QSNQVTVNELQSKLNEKEININQLIENNQSSLDELQSKLNEKQNEINQLIENNQSSSDEL 756
Query: 147 TQFLPQ--DRVCEF-AKLSPVKLLEETEKAVGDPQLPVQHCA--LVEKSSKLKTIECTVK 201
L + + E +KL+ +L+E E + + Q + + L EK KLK+++ +
Sbjct: 757 QSKLNEKHQEISELQSKLN--ELIENNESSSDELQSKLIQLSDELKEKDEKLKSLDSIII 814
Query: 202 RNGDTLNQLKALNVE-----QEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
N + L QL N + Q K E+ + EL+E +S +L K + K+ E
Sbjct: 815 ENQEKLVQLTKSNQDSLDELQSKLNEKQNEINELIENNQSSSNELQ-SKLNEKQNEINLL 873
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLE 314
N H+ ++ K EK K++ L+ EN++ D L+
Sbjct: 874 IENNQSSSDELQSKLNEKHQEINELQSKLNEKQ------NKINELV-ENNESSSDELQ 924
Score = 75 (31.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 364 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
+E ++E+ ++IL+L Q Q SEKE LNQ +L L + D+ ++E++NNK+
Sbjct: 1044 FENLEQELEEKNNKILDLNSQIIDVNHQFSEKENELNQLQLKLIE-KDQ--EIENQNNKI 1100
Query: 424 L 424
+
Sbjct: 1101 I 1101
Score = 68 (29.0 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 165 KLLEETEKAVGDPQLPVQHCA--LVEKSSKLKTIECTVKRNGDTLNQLKA-LNVEQEKDV 221
+L+E + + + +L + + L EK KLK++E ++ + ++QL+ LN +Q+K
Sbjct: 535 ELIENNQSSSDELKLKLNQLSDKLQEKDEKLKSLESSIIERDEKIDQLQDNLNEKQDKIN 594
Query: 222 ERVRQRAELLEKVES 236
E V ++++S
Sbjct: 595 ELVENNESSSDELQS 609
Score = 67 (28.6 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 17/75 (22%), Positives = 44/75 (58%)
Query: 165 KLLEETEKAVGDPQLPVQHCA--LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVE 222
+L+E E + + Q + + L EK ++LK+ E ++ + LNQL++ E++ +++
Sbjct: 911 ELVENNESSSDELQSKLIQLSDQLQEKENQLKSFESSIIERDEKLNQLQSKLNEKQNEID 970
Query: 223 RVRQRAEL-LEKVES 236
++ + + L++++S
Sbjct: 971 QITENNQSSLDELQS 985
Score = 60 (26.2 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 17/85 (20%), Positives = 46/85 (54%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLK-DMEDKNNKLLHAL 427
++++ S I+E + NQ + + +EK+ ++Q + D L+ ++ +K N++ +
Sbjct: 939 NQLKSFESSIIERDEKLNQLQSKLNEKQNEIDQITENNQSSLDELQSNLNEKQNEINQLI 998
Query: 428 RNSGAENIFEAYCWLQQHRHELNKE 452
N+ + ++ E L + +E+N++
Sbjct: 999 ENNQS-SLDELQSKLNEKLNEINEK 1022
Score = 57 (25.1 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 20/83 (24%), Positives = 43/83 (51%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
DK E + S LE + NQ +L ++++ N++T+ + +L + E N+L+ +
Sbjct: 673 DKNENVRS--LETSIIENQDKL-----DQLIQSNQVTVNELQSKLNEKEININQLIENNQ 725
Query: 429 NSGAENIFEAYCWLQQHRHELNK 451
+S + E L + ++E+N+
Sbjct: 726 SS----LDELQSKLNEKQNEINQ 744
>UNIPROTKB|F1NYR4 [details] [associations]
symbol:CENPF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] InterPro:IPR019513
Pfam:PF10473 GeneTree:ENSGT00700000104127 InterPro:IPR018302
Pfam:PF10490 EMBL:AADN02012085 EMBL:AADN02012086 IPI:IPI01017279
Ensembl:ENSGALT00000015770 ArrayExpress:F1NYR4 Uniprot:F1NYR4
Length = 1625
Score = 125 (49.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 58/240 (24%), Positives = 120/240 (50%)
Query: 652 EDEAAKLQK-EREEII--NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KL 706
ED A +++ ERE I N+++ K ++ + + L+S+EK D ++ L KL
Sbjct: 737 EDSAKTIRRLEREVKIQTNLLETAKSDTDQLSGEKDHLLQNLQSLEK-DALSFRLEEEKL 795
Query: 707 VDQAADLN-----IQQFKYAIEIKNLLVEIVSCKWS-YAEKHMASI-EFDAKIRELEFNL 759
+Q ADLN + + ++ K +EI + K S Y + + E A++ + +
Sbjct: 796 QNQVADLNKEKEVLMRESEMMQSKLSALEIENSKLSRYLDGLITEKRELAARLNSAQKEV 855
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
Q + + + E +++ H + L + +R+++++ LE+E LEM E LE
Sbjct: 856 NQMREGMEKLKIKIESDERKKRHIAEKLKENERKSDALLDKVERLERE-LEMSE--ENLE 912
Query: 820 -AAIQDNISQANSIFFLNQN--ILQEYEHRQRQIEDLSTKQEA---DKKELKRFLAEIDA 873
A +Q ++A + F+ + + ++ + Q QI+DL++++E D KE + + E+++
Sbjct: 913 DAVVQLETAKAEAETFITEKEEMAEKLKCLQSQIDDLTSQKECLAKDSKEKQERILELES 972
Score = 107 (42.7 bits), Expect = 0.00020, Sum P(3) = 0.00019
Identities = 66/272 (24%), Positives = 121/272 (44%)
Query: 661 EREEIINIVQIE-KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFK 719
+ E+ I+ +Q E +R+++ I L + E + + D++ +++ + L Q K
Sbjct: 1185 DAEQAISKLQEEFTMERKKLAEQIQLLQEHSE--QNKIDLHLVVSEKHELTKSLGAVQ-K 1241
Query: 720 YAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKE 779
E +N++ +S Y +K + E +E + LK+ + + + E C+++
Sbjct: 1242 ELQEKENIMKREIS---KYQDK-LLQTE-----KEHQNALKEANR---KNEIQIEACQEK 1289
Query: 780 VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI 839
V +S K + E + EL E T+ EL DNI N+I LN+
Sbjct: 1290 VNSLECFISSQKLEIEHLNSTKEELNNSLKEANQTLGELLKLKADNI---NTIVQLNKE- 1345
Query: 840 LQEYEHRQRQIEDLSTKQ-EADKKELKRFLAEIDAL-KEKWLPTLRNLVAQ---INETFS 894
+E+ + Q+ S KQ E +K+ L++ LA+ + L K+K L I E
Sbjct: 1346 -KEFVQSEVQLWIKSCKQMEQEKEVLQKQLADCEELLKKKDLSVSEKEGTDENAITEEIK 1404
Query: 895 RNFQEMAVAGEVSLDEHESDFDKFGILIKVKF 926
+E+ A EV E + +K+ LI VK+
Sbjct: 1405 LELEELQEAVEVKTREANENLEKYCSLI-VKY 1435
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(3) = 0.00019
Identities = 41/219 (18%), Positives = 93/219 (42%)
Query: 365 EPPHDKIEKLGSQILELGVQAN----QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN 420
E K E++ + L V+ N Q + Q+ E+++ +N + ++L + +
Sbjct: 643 EQRQTKSEQVNMETHALFVEGNAEILQAKCQQLERDREINLQTIP-SSLQEQLVSVTAER 701
Query: 421 NKL--LHALRNSGAENIFEAYCWLQQHRHEL--NKEAYGPVLLEVNVSNRAHANYLEDHV 476
N + ++ + + + + Y LQ+ EL NKE + + + N LE
Sbjct: 702 NHIGQEQSVLSENKKELGQEYQKLQEKLKELETNKEDSAKTIRRLEREVKIQTNLLETA- 760
Query: 477 GHYIWKSFITQDAGDRDFLAKNLKPFDVPILNY-VSNESSRKEPFQISEEMRALGISARL 535
KS Q +G++D L +NL+ + L++ + E + + +++E L + +
Sbjct: 761 -----KSDTDQLSGEKDHLLQNLQSLEKDALSFRLEEEKLQNQVADLNKEKEVLMRESEM 815
Query: 536 DQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK 574
Q + ++ +S++ LD +E + ++ K
Sbjct: 816 MQSKLSALEIENSKLSRY-LDGLITEKRELAARLNSAQK 853
Score = 62 (26.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 25/110 (22%), Positives = 45/110 (40%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSD-----RLKDMEDKNNKL-- 423
+ LG + ++ + N + S L+ +LT C D ++ + K+ ++
Sbjct: 595 VVSLGKEPEKISAKHNVNKTVLSNTTDTLDDIELTKGNCHDLFLGAEIEQRQTKSEQVNM 654
Query: 424 -LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYL 472
HAL G I +A C + E+N + L E VS A N++
Sbjct: 655 ETHALFVEGNAEILQAKCQQLERDREINLQTIPSSLQEQLVSVTAERNHI 704
Score = 60 (26.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
G +L+ K ++ + +++ P+ R+ E L ++ E+ K + + QL +Q E+
Sbjct: 269 GHILDSVKE--LRSSTPSKYNPEGRIKELEMLC--QIYEKVIKVLQN-QLHIQENMKTEE 323
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEK-DVERVRQRAELLEKVESMKKKLPWLKYDM 248
++K I + +R D L L Q+K + +L E E K L +D+
Sbjct: 324 IQEMKNIMLSERREIDKLQNLSDKKEWQQKLNYLTTEMECKLAE--EGKTKNL---SFDL 378
Query: 249 KKA 251
K A
Sbjct: 379 KTA 381
>CGD|CAL0004744 [details] [associations]
symbol:orf19.6712 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0030137 "COPI-coated vesicle" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] CGD:CAL0004744
EMBL:AACQ01000029 EMBL:AACQ01000028 eggNOG:NOG127593
InterPro:IPR022092 InterPro:IPR022091 Pfam:PF12329 Pfam:PF12325
RefSeq:XP_719695.1 RefSeq:XP_719812.1 GeneID:3638453 GeneID:3638566
KEGG:cal:CaO19.14004 KEGG:cal:CaO19.6712 Uniprot:Q5ADY0
Length = 658
Score = 140 (54.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 71/279 (25%), Positives = 123/279 (44%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENH-INLRKRKLESIEKEDDINTALAKLVDQA 710
ED+ L + E I +++E + NH N K + + I K + + +L +
Sbjct: 85 EDQKPDLDLQME--IERLKLENSALTKKLNHKSNFDKERNDLIAKLASKDETIEQLRKEG 142
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE-KLALQA 769
L++++ K IK L + + + + + S E K+ EL LK H+ K Q
Sbjct: 143 EALSLKELKLNESIKKLKLANQDLEENIRDYSVKSEESSMKLEELTDFLKTHKFKTIDQV 202
Query: 770 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 829
YE+ KE+E + L ++ E ++ E+ + EE AA ++ + +
Sbjct: 203 VSKYEEVVKELEVAKAGLENSHTW-----------ETKYNELVVSHEEANAAKKELLKET 251
Query: 830 NSIFFLNQNILQ-----EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN 884
N + + N+L+ E E + I++L ++ A K+ F EI L++K + TLR
Sbjct: 252 NEVK-IELNMLKRQHKLEIESKNATIKELKSQMSASKQS---FAQEISRLEDK-IETLR- 305
Query: 885 LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIK 923
L + NET S N E G+V DE + IL K
Sbjct: 306 LENESNETVSENVNE---DGKVDFDEFSKLSEAHRILQK 341
>UNIPROTKB|Q5ADY0 [details] [associations]
symbol:CaO19.14004 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] CGD:CAL0004744 EMBL:AACQ01000029 EMBL:AACQ01000028
eggNOG:NOG127593 InterPro:IPR022092 InterPro:IPR022091 Pfam:PF12329
Pfam:PF12325 RefSeq:XP_719695.1 RefSeq:XP_719812.1 GeneID:3638453
GeneID:3638566 KEGG:cal:CaO19.14004 KEGG:cal:CaO19.6712
Uniprot:Q5ADY0
Length = 658
Score = 140 (54.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 71/279 (25%), Positives = 123/279 (44%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENH-INLRKRKLESIEKEDDINTALAKLVDQA 710
ED+ L + E I +++E + NH N K + + I K + + +L +
Sbjct: 85 EDQKPDLDLQME--IERLKLENSALTKKLNHKSNFDKERNDLIAKLASKDETIEQLRKEG 142
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE-KLALQA 769
L++++ K IK L + + + + + S E K+ EL LK H+ K Q
Sbjct: 143 EALSLKELKLNESIKKLKLANQDLEENIRDYSVKSEESSMKLEELTDFLKTHKFKTIDQV 202
Query: 770 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 829
YE+ KE+E + L ++ E ++ E+ + EE AA ++ + +
Sbjct: 203 VSKYEEVVKELEVAKAGLENSHTW-----------ETKYNELVVSHEEANAAKKELLKET 251
Query: 830 NSIFFLNQNILQ-----EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN 884
N + + N+L+ E E + I++L ++ A K+ F EI L++K + TLR
Sbjct: 252 NEVK-IELNMLKRQHKLEIESKNATIKELKSQMSASKQS---FAQEISRLEDK-IETLR- 305
Query: 885 LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIK 923
L + NET S N E G+V DE + IL K
Sbjct: 306 LENESNETVSENVNE---DGKVDFDEFSKLSEAHRILQK 341
>DICTYBASE|DDB_G0287291 [details] [associations]
symbol:abpD "interaptin" species:44689 "Dictyostelium
discoideum" [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0009847 "spore germination" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA;IMP]
[GO:0042175 "nuclear outer membrane-endoplasmic reticulum membrane
network" evidence=IDA] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA;IDA] [GO:0003779 "actin binding" evidence=IEA;ISS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001589 InterPro:IPR001715 Pfam:PF00307 PROSITE:PS00019
PROSITE:PS00020 PROSITE:PS50021 SMART:SM00033
dictyBase:DDB_G0287291 GO:GO:0016021 GO:GO:0007275 GO:GO:0005635
GO:GO:0003779 GO:GO:0005789 GO:GO:0031965 GenomeReviews:CM000154_GR
GO:GO:0005815 eggNOG:COG5069 Gene3D:1.10.418.10 SUPFAM:SSF47576
EMBL:AF057019 EMBL:AAFI02000100 PIR:T14867 RefSeq:XP_637275.1
HSSP:P01096 ProteinModelPortal:O76329 IntAct:O76329
EnsemblProtists:DDB0191136 GeneID:8626106 KEGG:ddi:DDB_G0287291
OMA:IEKNESD GO:GO:0032580 GO:GO:0016337 GO:GO:0009847
Uniprot:O76329
Length = 1738
Score = 123 (48.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 57/231 (24%), Positives = 115/231 (49%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTAL 703
Q EQ+L + E+E I +Q++ ++R++++ +++ K+ +EK+ + L
Sbjct: 1104 QKEQQLKQQSIENDLIEKENQIQQLQLQLNEQRQLQSEVSIDNDKILELEKQLKQCQSDL 1163
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
KL D+ QQ K ++++ +E + ++ + + D++ +L+ + KQ
Sbjct: 1164 LKLNDEKQ----QQDK---QLQDKQIEFDQLQLTF---NQFKNDKDSQFIQLQDDQKQQL 1213
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
+ ++Q L+ K+E + K LS+ + +SI F E EK+ E E+L++ IQ
Sbjct: 1214 Q-SIQQDLN--QLKQENQEKEKQLSEKDEKLQSIQFENQEKEKQLSEKD---EKLQS-IQ 1266
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIE-DLST-KQEADKKELKRFLAEID 872
N++Q N E + + + I+ DL+ KQE +KE + L+E D
Sbjct: 1267 QNLNQLNDENQEKVKQFSEKDEKLQSIQQDLNQLKQENQEKEKQ--LSEKD 1315
Score = 119 (46.9 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 47/240 (19%), Positives = 123/240 (51%)
Query: 649 RLIEDEAAKLQKEREEIINIVQIEKRKRREM-ENHINLRKRKLESIEKEDDINTALAKL- 706
+L +D+ +LQ ++++ + Q + K +++ E L+ + E+ EKE ++ KL
Sbjct: 1204 QLQDDQKQQLQSIQQDLNQLKQENQEKEKQLSEKDEKLQSIQFENQEKEKQLSEKDEKLQ 1263
Query: 707 -----VDQAADLN---IQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 757
++Q D N ++QF E ++++ ++ K EK E D K++ ++
Sbjct: 1264 SIQQNLNQLNDENQEKVKQFSEKDEKLQSIQQDLNQLKQENQEKEKQLSEKDEKLQSIQQ 1323
Query: 758 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 817
+L Q ++ + ++ ++++ ++ +D +Q++ + +LE++ E +++
Sbjct: 1324 DLNQLNDDQIKKNEKLKEKEEQLLKLQQDFND--QQSQQLK----QLEEKLSEKENQLQQ 1377
Query: 818 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
L+ ++ I+Q N N+ I+Q+ + + + + ++ ++KE++R + EI+ LK++
Sbjct: 1378 LKQ--ENEINQLNQQQQSNE-IIQQLKDQLLKQQQQEQQENNNEKEIERLIQEIEQLKQQ 1434
Score = 76 (31.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 59/307 (19%), Positives = 122/307 (39%)
Query: 125 KVVPKGEVLEITKRFNIQ-VNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVG-DPQLPVQ 182
K+V +++E+ K + + LT QD++ E + + E++ K V + +L +
Sbjct: 402 KIVEVEKIVEVEKIVKVDDIEKLTNL--QDQLTEQQQ----QYQEKSLKLVNLELELQEK 455
Query: 183 HCALVEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQEKDVERVRQRAELLE--KVESMKK 239
LV+KS++L T++ T N + + ++ L N + + ++++ E++ K+ES +K
Sbjct: 456 SNQLVDKSNQLSTMQAT---NSELMEKIGGLMNDLTDIPTQDIKEKDEIIANLKIES-EK 511
Query: 240 KLPWLKYDMK--KAEYIXXXXXXXXXXXXXXXXXNTLHEFS-KPIEGKKQEKAILDGDCK 296
L + D ++ Y N L E K IE L + +
Sbjct: 512 NLKCFQDDFNALQSRYSLTIEQTSQLQDRIKQLINELQERDDKFIEFTNSSNQSLADNQR 571
Query: 297 KLSSLINENSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXX 356
+ L NE + ++ D + +
Sbjct: 572 VIDQLTNEKQSITLQLQDQQDIKEKEFQFEKQQLLSQIDSITTNIQEYQDKFNNLQQEFN 631
Query: 357 XXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQ-KSEKEKILNQNKLTLRQCSDRLKD 415
QT+ E H +L Q+ ++ N+K+ Q +SE + N+ +Q S++ K+
Sbjct: 632 TQQTLNQQET-H----RLTQQLYQINTDYNEKQTQLQSEIKDNQTINEQLNKQLSEKDKE 686
Query: 416 MEDKNNK 422
+E +N+
Sbjct: 687 IEKLSNQ 693
Score = 59 (25.8 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKS----EKEKILNQ--NKLTLRQCSDRLKDMEDKNN 421
+D IEK +QI +L Q N++R Q+S EK++ LNQ K Q +LK +N+
Sbjct: 1002 NDLIEK-ENQIQQLQSQLNEQRQQQSNQLSEKDQQLNQLIEKNQFDQKEQQLKQQSIEND 1060
Score = 57 (25.1 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
+D EK +QI +L Q N++R Q+S + L++ L Q ++ + + K +L
Sbjct: 1059 NDLFEK-ENQIQQLQSQLNEQRQQQSNQ---LSEKDQQLNQLIEK-NESDQKEQQL---- 1109
Query: 428 RNSGAEN-IFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 465
+ EN + E +QQ + +LN++ + EV++ N
Sbjct: 1110 KQQSIENDLIEKENQIQQLQLQLNEQRQ--LQSEVSIDN 1146
Score = 54 (24.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 33/119 (27%), Positives = 56/119 (47%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLL---EETEKAVG---D-PQLPVQH 183
E+L++ + N Q+ + QF Q EF+K + + + E+ EK + D QL Q+
Sbjct: 900 ELLKLQNQLNQQIEKI-QFDQQ----EFSKQNSINIELVNEKNEKLIQLQQDYDQLKQQN 954
Query: 184 CALVEKSSK-LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE--LLEKVESMKK 239
+ EK L E +K + LNQL N K+ + +Q E L+EK +++
Sbjct: 955 RSNDEKDENDLIEKENQLKSIQNELNQLIEKNESDHKEQQLKQQSIENDLIEKENQIQQ 1013
>ZFIN|ZDB-GENE-041111-205 [details] [associations]
symbol:cenpf "centromere protein F, (mitosin)"
species:7955 "Danio rerio" [GO:0045502 "dynein binding"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR019513
Pfam:PF10473 ZFIN:ZDB-GENE-041111-205 GeneTree:ENSGT00700000104127
InterPro:IPR018463 InterPro:IPR018302 Pfam:PF10481 Pfam:PF10490
EMBL:BX936381 IPI:IPI00798779 Ensembl:ENSDART00000087589
Bgee:E7FFC1 Uniprot:E7FFC1
Length = 2861
Score = 128 (50.1 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 56/255 (21%), Positives = 115/255 (45%)
Query: 659 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK--EDDI---NTALAKLVD-QAA- 711
++++ + +++ +RK ++++I +R+ E E+ ED I TA A+L + QA
Sbjct: 2026 ERKKNHMSQLLKAAQRKADVLQDNIEKLEREKELSEQNLEDAILQAETAKAELEEIQAET 2085
Query: 712 -DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS 770
DL + + E+K+L E + +K+ E I+E LK E+ L
Sbjct: 2086 QDLTKKIEEMTSELKDLKEEKYKLEQELDQKNKLIEELQLSIQEASVKLKSAEEATLNQE 2145
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 830
+D + +V + L + + ES EL L + + +E + +
Sbjct: 2146 QMIKDFQFKVGAMEEELRLFQTEVESKEVKALELASHLLSLESENKEFAQRVLEYERSQE 2205
Query: 831 SIFFLNQNILQEYEHRQRQIEDLSTK---QEADKKELKRFLAEIDALKEKWLPTLRNLVA 887
+ NQ++L+++E +Q+++ + +T+ Q A+ + L E D +K L++ +A
Sbjct: 2206 ELHSSNQSLLKDFESKQQELSEENTQLRSQIAELQALSLIREEQDEELQKDKVELQSTIA 2265
Query: 888 QINETFSRNFQEMAV 902
Q+ E +M V
Sbjct: 2266 QLEEKTQMQSTKMEV 2280
Score = 64 (27.6 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 39/180 (21%), Positives = 74/180 (41%)
Query: 142 QVNNLTQ--FLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLK-TIEC 198
+++NL Q L Q +V E KLL+ET K G Q Q A E + L + +
Sbjct: 711 EMDNLNQQITLTQGKVSELE----AKLLQETSKLEGMEQAHGQLLAEYESACILAMSKDS 766
Query: 199 TVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXX 258
++ N + L+ +++++E+ + ++L K E + + + +K
Sbjct: 767 IIEMNKTEIVHLQESFTLRDQELEKFKVEKDILAK-ECEDRLAQNKELEQQKLNTETSLM 825
Query: 259 XXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDC-KKLSSLINENSKRRMDFLEKVD 317
+ + I+GK E + + D +K+SSL KR D + +V+
Sbjct: 826 EVLAKFTLLESDLRCQKDLNAEIQGKYDELSKIKEDLVEKVSSL----EKREKDLINEVE 881
Score = 62 (26.9 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 378 ILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFE 437
+ E A + L K+E E N TL+ + L+ D + +L+ +L S +++ E
Sbjct: 1002 LAEKDAMAERIALIKTELETS-NNLSATLKNSLENLQTQFDSSVELISSLDMSDEKSLLE 1060
Query: 438 AYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHV 476
RH E Y + E+ + H + LE+H+
Sbjct: 1061 ISIKELTERHNKESEVY---VSELETHIKKHKS-LEEHI 1095
Score = 62 (26.9 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 32/119 (26%), Positives = 52/119 (43%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQ-DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
E+ E+ K+ + Q + Q L + A+ +K E +K V D +L VEK
Sbjct: 528 ELTELRKKMDHQSVSSAQELENLKKTLIEAEAKNMKTQAELQKLVHDVELKENKICAVEK 587
Query: 190 SS---KLKTIECT-----VKRNGDTLNQLKALNVEQEKDVERVRQ-RAELLEKVESMKK 239
+ K+ + C +K+ D L Q K E+E+ + R ELL KV ++K
Sbjct: 588 ENEELKMTSNSCQKELAEMKKEYDALLQWKT---EKEQLINNAESNRNELLAKVADLEK 643
Score = 54 (24.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 27/113 (23%), Positives = 52/113 (46%)
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVE 188
K ++E+ K + + F +D+ E K+ L +E E + + ++ L
Sbjct: 764 KDSIIEMNKTEIVHLQE--SFTLRDQELEKFKVEKDILAKECEDRLAQNK-ELEQQKLNT 820
Query: 189 KSSKLKTIECTVKRNGDTLNQLKALNVE-QEKDVERVRQRAELLEKVESMKKK 240
++S ++ + D Q K LN E Q K E + + +L+EKV S++K+
Sbjct: 821 ETSLMEVLAKFTLLESDLRCQ-KDLNAEIQGKYDELSKIKEDLVEKVSSLEKR 872
Score = 48 (22.0 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 29/134 (21%), Positives = 54/134 (40%)
Query: 408 QCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRA 467
Q ++ D+ED ++ L +R + + QH EL ++ +L N+ N
Sbjct: 1464 QMQNKSSDIEDMSHVLKETVRTMEEQTAIQIEQLKLQHATEL--QSMEEQML--NIKNEL 1519
Query: 468 HANYLEDHVGHYIWKSFIT---QDAGDRDFLAKNLKPFDVP-ILNYVSNESSRKEPFQIS 523
A E+ I S + Q + D + +L D L + +++RK +I
Sbjct: 1520 EAKLKEEKQHTEILSSQLEATMQQLQELDIASSSLLAADTSQTLCGTNTQNTRKNVREID 1579
Query: 524 EEMR--ALGISARL 535
+M +G+S L
Sbjct: 1580 SQMVHFLIGVSVTL 1593
>UNIPROTKB|F1SQ11 [details] [associations]
symbol:EEA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
evidence=IEA] [GO:0006906 "vesicle fusion" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005969
"serine-pyruvate aminotransferase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0005545 "1-phosphatidylinositol binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00064
SMART:SM00355 GO:GO:0005829 GO:GO:0046872 GO:GO:0005545
GO:GO:0008270 GO:GO:0006897 GO:GO:0019897 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0005769 GO:GO:0006906
OMA:LKEQCKT GO:GO:0005969 GeneTree:ENSGT00700000104373
EMBL:CU457729 EMBL:FP102822 Ensembl:ENSSSCT00000000996
Uniprot:F1SQ11
Length = 1411
Score = 136 (52.9 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 72/287 (25%), Positives = 132/287 (45%)
Query: 669 VQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLL 728
VQIE + + E +L K K S + + +IN+ +L QA + Q+ K +++ +
Sbjct: 903 VQIESAHKEQNELKNSLEKEKETSHQLKLEINSMQGQLT-QAQNSLKQKEKEEQQLQGNI 961
Query: 729 VEIVSCKWSYAEKHMASIEFDAKIR-----ELEFNLKQHEKLALQASLHYEDCKKEVEHC 783
E+ +K + +++ + KI ELE L+Q A Q ++ +++
Sbjct: 962 NELKQLT-EQKKKQIEALQGEVKIAVSQKTELENKLQQQSTQAAQELAAEKEKISVLQNA 1020
Query: 784 RKHLSDAKRQAESIAF-ITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQN-ILQ 841
+ + +Q +S + EL ++ + E+L A +D IS N I NQN ++Q
Sbjct: 1021 YEKNQENLKQLQSDFYGKESELLATRQDLKSVEEKLSLAQEDLISNRNQIG--NQNKLIQ 1078
Query: 842 EYEHRQRQIEDLSTKQEADKKELKRFLAEID---ALKEKWLPTLRNLVAQINETFSRNFQ 898
E + + +E S K+E KE + L ++ +LKEK L ++ +A+I E R +
Sbjct: 1079 ELKTARTTLEQDSAKKEEQLKEQCKALQDVQKEKSLKEKELVNEKSKLAEIEEIKCRQEK 1138
Query: 899 EMAVAGEVSLDEHESDF--------DKFGILIKVKFRQSGQLEVLSA 937
E+A E L H+ + D +LI+ K G+++ L A
Sbjct: 1139 EIAKLSE-ELKSHKQESIKEVTNLKDARQLLIQQKLELQGKVDSLKA 1184
Score = 118 (46.6 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 57/253 (22%), Positives = 110/253 (43%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMEN-HINLRKRKLESIEKEDDINTA 702
+Q E+ L E E L E+ ++ I +I+ R+ +E+ L+ K ESI++ ++ A
Sbjct: 1108 VQKEKSLKEKE---LVNEKSKLAEIEEIKCRQEKEIAKLSEELKSHKQESIKEVTNLKDA 1164
Query: 703 LAKLVDQAADLN--IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
L+ Q +L + K +E + +++ + E + EF K +L +K
Sbjct: 1165 RQLLIQQKLELQGKVDSLKATLEQEKKNQQMLKEQMKKEEDELKR-EFMEKETKLHSEIK 1223
Query: 761 QHEKLALQASLHYEDCKKEVEHC--RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 818
EK A + K+ ++ ++L K++ +S ELEK+ ++ I L
Sbjct: 1224 --EKAAAVQKHEENEAKRTMQMTALNENLGTVKKEWQSSQRRVSELEKQTDDLRGEIAVL 1281
Query: 819 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 878
EA +Q+N + ++ E E Q ++ +L K + ++ E +L+ K
Sbjct: 1282 EATVQNNQDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQELGRENQSLQIKH 1341
Query: 879 LPTLRNLVAQINE 891
L A+ NE
Sbjct: 1342 TQALNRKWAEDNE 1354
Score = 58 (25.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 29/115 (25%), Positives = 50/115 (43%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
L +KS L+ I+ + + + LK VE +++Q+ EL K+++ +L +K
Sbjct: 788 LQKKSEALENIKQMLTKQEEEKKILKQ-EVENLSQNAKMQQK-ELNNKIQAAVTELQKVK 845
Query: 246 YDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGD--CKKL 298
+ K+ N+ EF K E +K + AILD + CK L
Sbjct: 846 ME-KETLVTELSAAKEKLSKVSDSLKNSKSEFEK--ESQKGKAAILDLEKTCKDL 897
Score = 55 (24.4 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 36/169 (21%), Positives = 67/169 (39%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKE-KILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
D++ L + I EL Q N+ + + S+ + +I + +L L + + D N L
Sbjct: 614 DRVLSLEASISELSSQLNESKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHL---- 669
Query: 428 RNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRA-HANYLEDHVGHYIWKSFIT 486
A+N LQ + ELNK + + ++ H LE H+ Y K
Sbjct: 670 --DTAQNA------LQDKQQELNKITTQLDQVTTKLQDKQEHCGQLESHLKEYKEKHLSL 721
Query: 487 QDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARL 535
+ + L +K + L ++S+++ Q ++ R L L
Sbjct: 722 EQKTEE--LEGQIKKLEADSLEV---KASKEQALQDLQQQRQLNTDLEL 765
Score = 53 (23.7 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 167 LEETEKAVGDPQLPVQHC-ALVEKSSKLKTIECTVKRNGDTLNQLKA-------LNVEQE 218
LE+ + +GD +Q+ AL++KS + I K D +++A LN QE
Sbjct: 511 LEQVLRQIGDKDQKIQNLEALLQKSKE--NISLLEKEREDLYAKIQAGEGETAVLNQLQE 568
Query: 219 KDVERVRQRAELLEKVESMKK 239
K+ Q +L EK+++ +
Sbjct: 569 KNHILQEQVTQLTEKLKNQSE 589
Score = 50 (22.7 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 273 TLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKV 316
T+ + + QE A+ + +KL S +NE +++ + EK+
Sbjct: 268 TISQLRSELAKGPQEVAVYVQELQKLKSSVNELTQKNQNLTEKL 311
Score = 47 (21.6 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
+K+ Q+ +L Q RL++ KEK+ N +L Q D+ K + AL+
Sbjct: 446 EKLMDKEQQVADL--QLKLSRLEEELKEKVANSTELQ-HQL-DKTKQQHQEQQ----ALQ 497
Query: 429 NSGAENIFEAYCWLQQ 444
S + EA L+Q
Sbjct: 498 QSTTAKLREAQNDLEQ 513
Score = 46 (21.3 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 369 DKIEKLGSQILELGVQA-NQKRLQKSEKEKILNQ---NKLTLRQCSDRLKDMEDKNNKLL 424
+K L Q+ +L + NQ K +E + +Q K LR DR+ +E ++L
Sbjct: 568 EKNHILQEQVTQLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVLSLEASISELS 627
Query: 425 HALRNS 430
L S
Sbjct: 628 SQLNES 633
>UNIPROTKB|F2Z5G2 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0000800
"lateral element" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0007052 GO:GO:0000785 GO:GO:0016363 GO:GO:0000922
GO:GO:0032876 GO:GO:0051276 GO:GO:0000800 SUPFAM:SSF75553
GO:GO:0030893 OMA:NKVLEHF GeneTree:ENSGT00580000081628
EMBL:CT737341 EMBL:CU468424 Ensembl:ENSSSCT00000011621
Uniprot:F2Z5G2
Length = 934
Score = 132 (51.5 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 696
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 524 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 583
Query: 697 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 755
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 584 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 639
Query: 756 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 813
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 640 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 695
Query: 814 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 869
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 696 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 755
Query: 870 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 922
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 756 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 815
Query: 923 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 816 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 873
Query: 983 FQQLV 987
++
Sbjct: 874 VSDMI 878
Score = 54 (24.1 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 205 DTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
D ++L A N EQ K + +++R +LLEK+E +K+L
Sbjct: 28 DLQDEL-AGNSEQRKRL--LKERQKLLEKIEEKQKEL 61
Score = 52 (23.4 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 371 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 426
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 421 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 472
Query: 427 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 486
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 473 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 525
Query: 487 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 529
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 526 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 567
Score = 46 (21.3 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 168 EETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQR 227
EE E+ + Q ++ +E K K ++ + N + Q K L E++K +E++ ++
Sbjct: 3 EEKEQLSAERQEQIKQRTKLEL--KAKDLQDELAGNSE---QRKRLLKERQKLLEKIEEK 57
Query: 228 A-ELLE---KVESMKKK 240
EL E K S+K+K
Sbjct: 58 QKELAETEPKFNSVKEK 74
Score = 37 (18.1 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 13/62 (20%), Positives = 35/62 (56%)
Query: 192 KLKTIECTV---KRNGDTLNQ-LKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
+LK+++ + KR +++ L+ +EK++E+ + + L +V++ ++L Y+
Sbjct: 115 ELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYE 174
Query: 248 MK 249
+K
Sbjct: 175 VK 176
>DICTYBASE|DDB_G0285911 [details] [associations]
symbol:DDB_G0285911 "LIM-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
dictyBase:DDB_G0285911 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 EMBL:AAFI02000082 eggNOG:NOG257706
RefSeq:XP_637999.1 ProteinModelPortal:Q54MJ1
EnsemblProtists:DDB0233145 GeneID:8625350 KEGG:ddi:DDB_G0285911
InParanoid:Q54MJ1 OMA:CDSKFRE Uniprot:Q54MJ1
Length = 1061
Score = 129 (50.5 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 61/246 (24%), Positives = 113/246 (45%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN---LRKRKLESIEKEDDIN 700
+Q ++RL + +L+KER E + + K K +E + L + KLE KE D
Sbjct: 537 LQIKERLERERKERLEKERLEYERLETLRKEKEKERKEKFETARLEREKLELELKEKDEK 596
Query: 701 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYA-EKH---MASIEFDAKIRELE 756
K + + + N ++ K ++ K E +S + EK M ++ + ++L+
Sbjct: 597 KREEKRLAKIIEENRKKEKALVDKKLEEQERLSHELKIQKEKEILKMEKLDLQCEKKKLD 656
Query: 757 FNLK--QHEKLALQASLHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPT 813
K Q EK Q L + + K+ E+ ++ ++ ++Q + P L K+ PT
Sbjct: 657 KEKKELQIEKELSQKQLQFIELKQQEINQQQQEINHQQQQQQQTQQQIPLLTKQ----PT 712
Query: 814 TIEELE-AAIQDNISQAN--SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 870
+EE+E +Q+ I Q L Q + +E + R ++ E+ ++E KELK
Sbjct: 713 -VEEIEYERVQEEIKQKKLEREQRLKQQLEEEEKERLKRQEERQKRKEQRDKELKEEELR 771
Query: 871 IDALKE 876
I+A +E
Sbjct: 772 IEAERE 777
Score = 57 (25.1 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 36/146 (24%), Positives = 67/146 (45%)
Query: 102 KEEHLTI-MRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC--EF 158
KEE L K++ K E+ + P+ ++I ++ ++ L Q ++R+ E
Sbjct: 266 KEEQLKRDQEKLEREKKREYH---QQQPQQTQIQIHQQKMLEKERLAQE-EKERLLVEER 321
Query: 159 AKLSPVKL-LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALN-VE 216
+L+ ++ E+ EK D + + A +EK +L++ +R + K +E
Sbjct: 322 ERLNATRVEREKQEKERLDRERKEREQARLEKE-RLESERLEKERQARVERERKEFERIE 380
Query: 217 QEK-DVERVRQRAELLEKVESMKKKL 241
+EK D E+ R E LE K+KL
Sbjct: 381 KEKRDREQTRLENERLENERLKKEKL 406
Score = 54 (24.1 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME--DKNNK 422
++ E+L + +E + NQ RL K ++EK + + RQ +RL+ E +K K
Sbjct: 437 ERKERLEKEKIEKEERENQLRLAKEKEEK--EEKERQERQLKERLERKEKLEKERK 490
Score = 51 (23.0 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 24/109 (22%), Positives = 55/109 (50%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E T+ N ++ N + L ++++ E +L + +E ++ + + +L + E+ +L
Sbjct: 387 EQTRLENERLEN--ERLKKEKL-EKERLENERFEKERQERIENERLENERFER-ERKERL 442
Query: 194 KT--IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKK 240
+ IE + N L + K E+E+ ++++R E EK+E +K+
Sbjct: 443 EKEKIEKEERENQLRLAKEKEEKEEKERQERQLKERLERKEKLEKERKE 491
Score = 50 (22.7 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDR-LKDMEDKNNK 422
++ E+ + LE + ++R ++ EKE+ Q +L L++ DR K+ +K K
Sbjct: 469 ERQERQLKERLERKEKLEKERKEREEKEEKDRQERLQLKERLDRERKERLEKERK 523
Score = 45 (20.9 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 14/56 (25%), Positives = 30/56 (53%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
E+L ++ E + ++RL+K + EK +N+L L + + ++ E + +L L
Sbjct: 427 ERLENERFE---RERKERLEKEKIEKEERENQLRLAKEKEEKEEKERQERQLKERL 479
Score = 44 (20.5 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
+K+EK + E + Q+RLQ KE++ + K L + +R K+ E+K+ K
Sbjct: 483 EKLEKERKEREEKEEKDRQERLQL--KERLDRERKERLEK--ER-KEREEKDEK 531
Score = 44 (20.5 bits), Expect = 0.00051, Sum P(4) = 0.00051
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 281 IEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEK 315
+E +KQEK LD + K+ E + + LEK
Sbjct: 329 VEREKQEKERLDRERKEREQARLEKERLESERLEK 363
Score = 39 (18.8 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 369 DKIEKLGSQI-LELGVQANQK----RLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
+KIEK + L L + +K R ++ KE++ + KL + K+ +D+ +L
Sbjct: 445 EKIEKEERENQLRLAKEKEEKEEKERQERQLKERLERKEKLEKERKEREEKEEKDRQERL 504
Score = 39 (18.8 bits), Expect = 0.00051, Sum P(4) = 0.00051
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 200 VKRNGDTL-NQLKALNVEQEKDVERVRQRAELLEKVESMKKK 240
+K +G+ L N +K L ++ + E+ Q EK+E KK+
Sbjct: 243 LKVSGNKLFNNIK-LELQSREKREKEEQLKRDQEKLEREKKR 283
>UNIPROTKB|E1BRE5 [details] [associations]
symbol:EEA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005545
"1-phosphatidylinositol binding" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005969 "serine-pyruvate aminotransferase complex"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0006906
"vesicle fusion" evidence=IEA] [GO:0019897 "extrinsic to plasma
membrane" evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR000306 InterPro:IPR015880 Pfam:PF01363
SMART:SM00064 SMART:SM00355 GO:GO:0005829 GO:GO:0046872
GO:GO:0005545 GO:GO:0008270 GO:GO:0006897 GO:GO:0019897
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0005769
GO:GO:0006906 GO:GO:0005969 GeneTree:ENSGT00700000104373
EMBL:AADN02005915 EMBL:AADN02005916 IPI:IPI00571138
Ensembl:ENSGALT00000018404 OMA:NEVLADQ Uniprot:E1BRE5
Length = 1411
Score = 152 (58.6 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 63/269 (23%), Positives = 126/269 (46%)
Query: 660 KEREEIINIVQIEKRKRR-EMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQF 718
K + E++ + K +R +++NH++ + L+ +K+ ++N +L A LN +Q
Sbjct: 645 KAKTELLLSAEASKAAQRADLQNHLDTAQHALQ--DKQQELNKVSVQLDQVTAKLNDKQ- 701
Query: 719 KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKK 778
+Y +++ L + Y E+H+ + K ELE LK+ E L A E +
Sbjct: 702 EYCAQLEANLKD-------YKEQHLY---LEQKTEELEGQLKKLEADVLDAKASKEQALQ 751
Query: 779 EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT-------IEELEAAIQDNISQANS 831
E++ R+ ++ + IA ++ +LE E M + E LE A Q Q
Sbjct: 752 ELQQQRQQSTELDLR---IAELSKQLEAEREAMSSAKSDLQKKSEALEQAKQQISKQEEE 808
Query: 832 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 891
L +N+ + + +Q++DL K +A EL++ E D L K L + + +++ +E
Sbjct: 809 NASLKKNLEKSSQDTSKQLKDLDCKMQAATSELQQVKLEKDTLL-KDLTSTKEKLSKSSE 867
Query: 892 TFSRNFQEMAVA---GEVSLDEHESDFDK 917
+F + +E+ G+ ++ E E + +
Sbjct: 868 SFKKRKEELEKEIEKGKAAVAEMEKSYQE 896
Score = 119 (46.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 71/305 (23%), Positives = 134/305 (43%)
Query: 656 AKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVD--QAADL 713
A+++K +E+ +Q++ + N + S+EK++ I+ L+ +D +A L
Sbjct: 888 AEMEKSYQEVKQQLQVQTESVAKERNELK------NSLEKKEGISKQLSIELDSTRAQVL 941
Query: 714 NIQQFKYAIEI--KNLLVEIVSCKWSYAEK--HMASIEFDAKIRELEFNLKQHEKLALQA 769
IQ E ++L ++ K S+ +K H +++ + K LE + KL Q
Sbjct: 942 EIQGLLKEKENSEQHLQGKLREMKESFEQKKKHSETLQTELKTALLE-KAELENKLQQQT 1000
Query: 770 SLHYEDCKKE---VEHCRKHLSDAKRQAESIAFITPELEKEFL----EMPTTIEELEAAI 822
L ++ K E + +K K E + E E L ++ +T E+L A
Sbjct: 1001 ILSAQELKAEKGKLADLQKTHEKNKENMEKLQLDLYGKESELLATRQDLKSTEEKLALAQ 1060
Query: 823 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID---ALKEKWL 879
++ +S N I NQ I QE + + +E ++K+E E + L ++ LKEK L
Sbjct: 1061 EELVSSRNRIASSNQQI-QELKKAKSTLEQDASKKEQQLGEKAKMLQDLQNERILKEKDL 1119
Query: 880 PTLRNLVAQINETFSRNFQEMAVAGE---VSLDEHESDF----DKFGILIKVKFRQSGQL 932
+ ++ E SR +E A E + E E + D +LI+ K G++
Sbjct: 1120 ANEKCKTTELQEIRSRLEKESAKLSEELRICKQEFEKEVANLKDAKQLLIQQKLELQGKI 1179
Query: 933 EVLSA 937
+ +++
Sbjct: 1180 DNMNS 1184
Score = 66 (28.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 70/379 (18%), Positives = 143/379 (37%)
Query: 167 LEETEKAVGDPQLPVQHC-ALVEKSSKLKTIECTVKRNGDTLNQLKA-------LNVEQE 218
LE+ + +GD +Q+ AL++KS + I K D +++A LN QE
Sbjct: 511 LEQVLRQIGDKDQKIQNLEALLQKSKE--NISLLEKEREDLYAKIQAGEGETAVLNQLQE 568
Query: 219 KDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFS 278
K+ Q +L EK+++ + + ++ + N + E S
Sbjct: 569 KNHALQIQVTQLTEKLKNQSESHKQAQENLHEQVQEQKAHLRAAQDRVLSLEAN-ITELS 627
Query: 279 KPIEGKKQEKAILDGDCKKLSSLI--NENSK--RRMDFLEKVDXXXXXXXXKYKXXXXXX 334
+ K++ + LD K + L+ E SK +R D +D K +
Sbjct: 628 SQLNESKEKVSQLDVQVKAKTELLLSAEASKAAQRADLQNHLDTAQHALQDKQQELNKVS 687
Query: 335 XXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPH----DKIEKLGSQILELGVQANQKRL 390
K + Y+ H K E+L Q+ +L +
Sbjct: 688 VQLDQVTA---KLNDKQEYCAQLEANLKDYKEQHLYLEQKTEELEGQLKKLEADVLDAKA 744
Query: 391 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN 450
K + + L Q + + R+ ++ + A+ +S ++ + L+Q + +++
Sbjct: 745 SKEQALQELQQQRQQSTELDLRIAELSKQLEAEREAM-SSAKSDLQKKSEALEQAKQQIS 803
Query: 451 KEAYGPVLLEVNV--SNRAHANYLED-HVGHYIWKSFITQDAGDRDFLAKNLKPFDVPIL 507
K+ L+ N+ S++ + L+D S + Q ++D L K+L +
Sbjct: 804 KQEEENASLKKNLEKSSQDTSKQLKDLDCKMQAATSELQQVKLEKDTLLKDLTSTKEKLS 863
Query: 508 NYVSNESSRKEPFQISEEM 526
S+ES +K ++ +E+
Sbjct: 864 K--SSESFKKRKEELEKEI 880
Score = 52 (23.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 32/145 (22%), Positives = 66/145 (45%)
Query: 172 KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELL 231
KA D ++ ++ A +K + L T E +R+ T+ LK + Q VE V + L
Sbjct: 176 KAKYDEEISLREGA-EQKMTNL-TQELLKERS--TIEDLKT-ELLQRPGVEDVAVLKKEL 230
Query: 232 EKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAIL 291
+V+++ K+ L+ + +++E + T+++ + QE A+
Sbjct: 231 VQVQTLMDKMT-LERE-RESEKLKDECKHLQAEQANSEA--TINQLRAELAKGPQEVAVY 286
Query: 292 DGDCKKLSSLINENSKRRMDFLEKV 316
+ +KL SL+ E ++ + EK+
Sbjct: 287 VQEQQKLQSLVKELEQKNQNLTEKL 311
Score = 39 (18.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME 417
+++ ++ ++ L + Q + Q+ EKE+ Q + L Q +L + E
Sbjct: 379 EELSEVETKYQHLKAECKQLQQQREEKEQHGLQLQSELSQLHSKLLETE 427
>UNIPROTKB|F1NX91 [details] [associations]
symbol:RAD50 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004518 "nuclease activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030870 "Mre11
complex" evidence=IEA] InterPro:IPR004584 InterPro:IPR007517
Pfam:PF04423 GO:GO:0005524 GO:GO:0008270 GO:GO:0006281
GO:GO:0090305 GO:GO:0004518 GO:GO:0030870 InterPro:IPR013134
PANTHER:PTHR18867 TIGRFAMs:TIGR00606 PROSITE:PS51131
GeneTree:ENSGT00390000018781 EMBL:AADN02028242 EMBL:AADN02028243
EMBL:AADN02028244 IPI:IPI00572742 Ensembl:ENSGALT00000010987
ArrayExpress:F1NX91 Uniprot:F1NX91
Length = 1248
Score = 126 (49.4 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 55/280 (19%), Positives = 119/280 (42%)
Query: 652 EDEAAKLQKEREEIIN-------IVQIEKRKRREMENHINLRKRKLESIEKE-DDINTAL 703
E E K +K+R+E+I +V++++R ++ N + R ++ E ++ T L
Sbjct: 716 ESELKKREKKRDEMIGLKPIRQTVVELQERDIPDLRNRLQTVNRDFARLKGEIEEQETLL 775
Query: 704 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
++ + N ++ L+ C ++ +K ++ AK+ ++ N K
Sbjct: 776 QTVLSEKEGANA-----CLQDITLMERYQVCVCNFCQKLLSR---QAKLLGVDLNSKLQV 827
Query: 764 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 823
QA ++ ++E +K D + Q + + EL E L++ ++++ + +
Sbjct: 828 SQEKQAKKLWDTVTSKIELNQKMKQDQQNQIQELKSTVNELRAEKLQISSSVQRRQQLEE 887
Query: 824 DNISQANSIFFLNQNILQEYEH----------RQRQIEDLSTKQEADKKELKRFLAEIDA 873
+ + L++ I +E E Q+ EDL K+ A KE++ +++A
Sbjct: 888 QTVELTTEVQSLSREIKEEKEQVFPLDATLEKLQQDKEDLINKRTASNKEIQE---KMNA 944
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES 913
+KEK + + +I + +E E LDE S
Sbjct: 945 IKEK-VKDINKYTKEIENYIQQGKEEYKKQKECELDEVNS 983
Score = 61 (26.5 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 45 LNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEES---GYIKISLRGDT 101
L +++GPNG+GK++++ + GD + S K E+ I++ R D
Sbjct: 31 LTILVGPNGAGKTTIIECLKYISTGDFPPGTKGNSFVHDPKVANETDVRAQIRLQFR-DV 89
Query: 102 KEEHLTIMRKIDTRNKSE 119
E + + R + KS+
Sbjct: 90 SGELIAVQRSMVCTQKSK 107
Score = 53 (23.7 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 25/90 (27%), Positives = 40/90 (44%)
Query: 369 DKIE--KLG-SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLH 425
DKI K G + ++L KRL + + K L SDR+ +++ + K+ H
Sbjct: 430 DKIRDRKTGLERSIDLKSDIQNKRLAELKNVKY---ELCQLEGSSDRIAELDREIVKMEH 486
Query: 426 AL----RNSGAENIFEAYCWLQQHRHELNK 451
L RNS E + + LQ + L+K
Sbjct: 487 ELEKAERNSNVETLEQEVQTLQNEKINLDK 516
Score = 50 (22.7 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 17/87 (19%), Positives = 36/87 (41%)
Query: 220 DVERVRQRAELLEK-VESMKKKLPWLKYDM-KKAEYIXXXXXXXXXXXXXXXXXNTLHEF 277
++ R R LL K + S +++ ++ ++ KK E + + L++
Sbjct: 586 EINETRSRHALLNKQLASAEQQKNYISAELRKKEEQLSNYEAKLFDVCGSQDFDSNLNKL 645
Query: 278 SKPIEGKKQEKAILDGDCKKLSSLINE 304
IE +++A+L G S I +
Sbjct: 646 QDEIEKSSKQRAVLAGATAVYSQFITQ 672
Score = 46 (21.3 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 12/53 (22%), Positives = 30/53 (56%)
Query: 188 EKSSKLKTIECTVKR-NGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
E++S ++T+E V+ + +N K L ++++E++ + ++E +KK
Sbjct: 492 ERNSNVETLEQEVQTLQNEKINLDKVLR-RLDQEMEQLNLHTTTITQMEMLKK 543
Score = 45 (20.9 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 219 KDVERVRQ-RAELLEKVESMKKKLPWLKYDMKKAEYI 254
K +E +RQ R + KV+ + +L +LK + +KA+ I
Sbjct: 187 KALETLRQVRLKQGTKVKECQTELKYLKQNKEKAQEI 223
Score = 41 (19.5 bits), Expect = 0.00023, Sum P(4) = 0.00023
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 386 NQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
N +R K EKEK L+ K L + S + + ++LL
Sbjct: 310 NHQRTVK-EKEKRLSDCKRELDRASKECQRFNSEKSELL 347
Score = 38 (18.4 bits), Expect = 7.6e-05, Sum P(4) = 7.6e-05
Identities = 19/115 (16%), Positives = 44/115 (38%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
L + ++L + +K L+ LK+ EK++ V ++ +ES + ++
Sbjct: 227 LANREAQLSASKENIKSIESQLDPLKSSLAAVEKNLMEVMSLDNNVKALESRRIQMEKDN 286
Query: 246 YDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSS 300
D+++ T+ E K + K+E +C++ +S
Sbjct: 287 QDLQRKMEKVFQGTDEQLKDRYHNHQRTVKEKEKRLSDCKRELDRASKECQRFNS 341
Score = 37 (18.1 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 392 KSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
++E + +++ + LR D+LK E + K
Sbjct: 691 EAELQDVISDLQSKLRLAPDKLKSTESELKK 721
>MGI|MGI:1339709 [details] [associations]
symbol:Myh3 "myosin, heavy polypeptide 3, skeletal muscle,
embryonic" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016459 "myosin complex"
evidence=IDA] [GO:0032982 "myosin filament" evidence=IEA]
[GO:0043292 "contractile fiber" evidence=IDA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 MGI:MGI:1339709
GO:GO:0005524 GO:GO:0030016 GO:GO:0043292 EMBL:AL645988
GO:GO:0003774 eggNOG:COG5022 GO:GO:0016459 GO:GO:0032982
HOVERGEN:HBG004704 KO:K10352 InterPro:IPR015650
PANTHER:PTHR13140:SF22 HOGENOM:HOG000173959
GeneTree:ENSGT00680000099790 OrthoDB:EOG43N7BR EMBL:AL596129
CTD:4621 OMA:NGYRGKK EMBL:AK132623 EMBL:M11154 IPI:IPI00380895
PIR:A24733 RefSeq:NP_001093105.1 UniGene:Mm.340090
ProteinModelPortal:P13541 SMR:P13541 STRING:P13541
PhosphoSite:P13541 PaxDb:P13541 PRIDE:P13541
Ensembl:ENSMUST00000007301 Ensembl:ENSMUST00000108689
Ensembl:ENSMUST00000165221 GeneID:17883 KEGG:mmu:17883
UCSC:uc007jlx.1 InParanoid:P13541 NextBio:292685 Bgee:P13541
Genevestigator:P13541 GermOnline:ENSMUSG00000020908 Uniprot:P13541
Length = 1940
Score = 137 (53.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 70/295 (23%), Positives = 128/295 (43%)
Query: 654 EAAKLQKEREEI--INIVQIEKRKRREMENHINLRKRKLE--SIEKEDDINTALAKLVDQ 709
E +L + EE + QIE K+RE E + LR R LE +++ E + T K D
Sbjct: 1143 ELEELSERLEEAGGVTSTQIELNKKREAE-FLKLR-RDLEEATLQHEATVATLRKKHADS 1200
Query: 710 AADL-----NIQQFKYAIEIKN----LLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
AA+L N+Q+ K +E + L ++ +S K A++E + E + +
Sbjct: 1201 AAELAEQIDNLQRVKQKLEKEKSEFKLEIDDLSSSVESVSKSKANLEKICRTLEDQLSEA 1260
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
+ + +Q SL + + + + RQ E I +L + IEEL+
Sbjct: 1261 RGKNEEMQRSL--SELTTQKSRLQTEAGELSRQLEEKESIVSQLSRSKQAFTQQIEELKR 1318
Query: 821 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 880
+++ N++ Q+ + + + Q E+ +QE K EL+R L++ ++ +W
Sbjct: 1319 QLEEENKAKNALAHALQSSRHDCDLLREQYEE---EQEG-KAELQRALSKANSEVAQWRT 1374
Query: 881 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL 935
Q E +++A + S ++ E+ K L K K R G++E L
Sbjct: 1375 KYETDAIQRTEELEEAKKKLAQRLQDSEEQVEAVNAKCASLEKTKQRLQGEVEDL 1429
Score = 61 (26.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 47/254 (18%), Positives = 95/254 (37%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVE-QEKDVERVRQRAELLEKVESMKKKLPWLKY 246
E ++ T++ ++ D L + +A E +EK V V+++ +L +V++ + L L
Sbjct: 845 ETEKEMATMKEEFQKTKDELAKSEAKRKELEEKLVTLVQEKNDLQLQVQAESENL--LDA 902
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS 306
+ + + I E + + KK++ L+ +C +L I++
Sbjct: 903 EERCDQLIKAKFQLEAKIKEVTERAEDEEEINAELTAKKRK---LEDECSELKKDIDDLE 959
Query: 307 KRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEP 366
L KV+ K K + R QT+ +
Sbjct: 960 LT----LAKVEKEKHATENKVKNLTEELAGLDETIAKL--TREKKALQEAHQQTLDDLQA 1013
Query: 367 PHDKIEKLGS--QILELGVQANQKRLQKSEKEKI-LNQNKLTL----RQCSDRLKDMEDK 419
DK+ L LE V + L++ +K ++ L +NK L + + + D+E+
Sbjct: 1014 EEDKVNSLSKLKSKLEQQVDDLESSLEQEKKLRVDLERNKRKLEGDLKLAQESILDLEND 1073
Query: 420 NNKLLHALRNSGAE 433
+L L+ E
Sbjct: 1074 KQQLDERLKKKDFE 1087
Score = 51 (23.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD 415
KI++L ++I EL + +R +++ EK + L + S+RL++
Sbjct: 1108 KIKELQARIEELEEEIEAERATRAKTEKQRSDYARELEELSERLEE 1153
>UNIPROTKB|F1SU27 [details] [associations]
symbol:GCC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090161 "Golgi ribbon formation" evidence=IEA]
[GO:0071955 "recycling endosome to Golgi transport" evidence=IEA]
[GO:0070861 "regulation of protein exit from endoplasmic reticulum"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0034499 "late endosome to Golgi transport" evidence=IEA]
[GO:0034453 "microtubule anchoring" evidence=IEA] [GO:0031023
"microtubule organizing center organization" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000042 "protein targeting to Golgi" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 SMART:SM00755
GO:GO:0005634 GO:GO:0005794 GO:GO:0005802 GO:GO:0006622
GO:GO:0070861 GO:GO:0031023 GO:GO:0034453
GeneTree:ENSGT00700000104373 GO:GO:0000042 Gene3D:1.10.220.60
OMA:CQIEASA GO:GO:0090161 GO:GO:0034499 GO:GO:0071955 EMBL:CU467581
EMBL:FP102256 Ensembl:ENSSSCT00000008915 Uniprot:F1SU27
Length = 1646
Score = 106 (42.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 51/252 (20%), Positives = 112/252 (44%)
Query: 650 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 709
L+ E A ++ +E+ + + K ++E I ++K+K E++++E T+L V Q
Sbjct: 1119 LMNMEIADYERLMKELNQKLANKNSKIEDLEQEIKIQKQKQETLQEE---MTSLQASVQQ 1175
Query: 710 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI--EFDAKIRELE-FNLKQHEKLA 766
+ N + + ++ K L + + + AS+ E +A +++E F ++ E A
Sbjct: 1176 YEEKNTKIKQLLVKTKKELADSKQAENDHLLLQ-ASLKGELEASQQQIEGFKIQLAEVTA 1234
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 826
+ H E K E ++ L +++ ++ + E + + E + + + +
Sbjct: 1235 EKHKAH-EHLKASAEQQQRTLGTYQQRVAALQEECRAAKAEQAAVTSEFESYKVRVHNVL 1293
Query: 827 SQAN--SIFFL-NQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 883
Q S+ N+ QE EH + I+ L K + + L+ ++E+ AL+ + L
Sbjct: 1294 KQQKNKSVSQTENEGAKQEREHLEMLIDQLKIKLQDTQNNLQVHVSELQALQSEHDALLE 1353
Query: 884 NLVAQINETFSR 895
+ ET S+
Sbjct: 1354 RNSRLLQETVSK 1365
Score = 91 (37.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 83/387 (21%), Positives = 164/387 (42%)
Query: 93 IKISLRGDTKEEHLTIMRKID-TRNKSEWFFNGKVVPKGEVLEITKRFN----IQVNNLT 147
++ SLR D ++E +T+ ++++ T +K E + + K E T+ N IQV ++
Sbjct: 789 LRSSLR-DHEQEKVTLRKELEETLSKKEALEHDLLEMKN-ANEQTRLENQNLLIQVEEVS 846
Query: 148 QFL------PQDRVCEFAK-LSPVK-LLEETEKAVGDPQLPVQHCA-LVEKSSKLKTIEC 198
Q L ++ F K L +K LLEE E + D + + +EKS +++ +
Sbjct: 847 QKLCSRNENHNEKEKSFIKELEHLKPLLEEKESELQDLRAELVSLKDSLEKSPSVESDQP 906
Query: 199 TVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK-VESMKKKLPWLKYDMK--KAEYIX 255
+VK + + L+ + E+E+ + +++ A +K ++S +K+ L+ +++ ++E
Sbjct: 907 SVKEFEEKIGYLEKESKEKEEKINKLKLVAVKAKKELDSSRKETQILREELESVRSEKDQ 966
Query: 256 XXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEK 315
N L E+ K E +EK + + L + EK
Sbjct: 967 LSTSMRDLIQGAESYKNLLLEYDKQSEQLDKEKERANNFEHHVEDLTRQLKNTTFQ-CEK 1025
Query: 316 VDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLG 375
++ + + IL+A + + KI++
Sbjct: 1026 LNSDNEDLLARIETLQSNTRLLEVQ---ILEAHKAKAVADRELEAEKLQK--EQKIKEHA 1080
Query: 376 SQI-----LELGVQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDMEDKNNKLLH 425
S I L+L +Q +K+LQK+ +E K Q L + +D + M++ N KL
Sbjct: 1081 SSICELEELQLQLQKEKKQLQKTMQELELVRKDAQQTTLMNMEIADYERLMKELNQKL-- 1138
Query: 426 ALRNSGAENIFEAYCWLQQHRHELNKE 452
A +NS E++ E +Q+ + E +E
Sbjct: 1139 ANKNSKIEDL-EQEIKIQKQKQETLQE 1164
>UNIPROTKB|E1BAT8 [details] [associations]
symbol:KIF20B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005874 "microtubule" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR001752 InterPro:IPR019821 Pfam:PF00225
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
GO:GO:0005524 GO:GO:0005875 GO:GO:0005874 GO:GO:0003777
GO:GO:0007018 Gene3D:3.40.850.10 GeneTree:ENSGT00530000063172
CTD:9585 OMA:KLGIKHQ EMBL:DAAA02058745 EMBL:DAAA02058746
IPI:IPI00699607 RefSeq:NP_001098728.1 UniGene:Bt.46840
ProteinModelPortal:E1BAT8 PRIDE:E1BAT8 Ensembl:ENSBTAT00000032984
GeneID:514679 KEGG:bta:514679 NextBio:20871459 Uniprot:E1BAT8
Length = 1788
Score = 142 (55.0 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 87/394 (22%), Positives = 166/394 (42%)
Query: 655 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADL- 713
+AKL++E E +I+ ++R E + NL+ +SI+ D++ KL ++ L
Sbjct: 1148 SAKLEQEIMEKESIILKQERNLNECQ--ANLK----DSIQNARDLSEREVKLKEEIMQLT 1201
Query: 714 -NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRE-LEFNLKQHEKLALQASL 771
N+Q K ++++K E W EK + + + L+ +L++ E+ +
Sbjct: 1202 KNLQDAKQSLQLKE---EEKERNWQETEKLKEELSASTTLTQNLKADLQRKEEDYAELKE 1258
Query: 772 HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANS 831
D KK++E +K +S + + + + ELEK+ + I+ + IQ Q N
Sbjct: 1259 KLADAKKQIEQVQKEISVMRDEEKLLRIKINELEKKKNQCSQEIDMKQRTIQQLKEQLN- 1317
Query: 832 IFFLNQNILQEYEHRQRQIEDLSTKQEADK------KELKRFLAEIDALKEKWLPTLRNL 885
NQ + + + +R +DLS K++ K +E ++ E D + E L L
Sbjct: 1318 ----NQKVEEAIQQYERVCKDLSVKEKIIKDMQMTLEEQEQTQVEQDQVLEAKLEETERL 1373
Query: 886 VAQINETFSRNFQEM-AVAGEVSLDEHESDFDKFGI-LIKVKFRQSGQLEVLSAHHQSGG 943
++ E + ++++ A + S E E + D L K++ + A +
Sbjct: 1374 ATELEE-WKEKYKDLEAKHNQSSNKEFEDNTDVLNTKLSKLQDELQESEQKHEAERKKWL 1432
Query: 944 ERSVSTILYLVSLQDLTNCPFRVVDEINQG-MDPINERKMFQ-QLVRAASQPNTPQCFLL 1001
E + I ++L N + E + + NE ++ + QL A N Q
Sbjct: 1433 EEKMMLITQAKEAENLRNKEMKKYAEDREHCLKQQNEMEILKGQL--AEKDGNLQQWREE 1490
Query: 1002 TPKLLPDLEYS-EACSILNIMNGPWIEQPSKVWS 1034
+L+ LE +A N+ IEQ K+ S
Sbjct: 1491 RDQLVAALEIQLKALISSNVQKDNEIEQLKKITS 1524
Score = 60 (26.2 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 20/72 (27%), Positives = 42/72 (58%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK---LLH 425
++++K S+ E+ + + + L+KS K KI+ QN+ +++ D++ ED NK L
Sbjct: 698 EELKKRESES-EINLNSLVQELEKSNK-KIIMQNQ-RIQELMDKIDQKEDTINKFQNLKF 754
Query: 426 ALRNS--GAENI 435
+ N+ G++N+
Sbjct: 755 HMENTCKGSDNV 766
Score = 56 (24.8 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 25/92 (27%), Positives = 47/92 (51%)
Query: 168 EETEKAVGDPQLPVQHC-ALVEKSSK--LKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
+ETE+A+ ++ A + K+ + +KT E KR ++ L +L E EK +++
Sbjct: 666 DETEEAIACLEIKFNQVKAELAKTKEELIKTREELKKRESESEINLNSLVQELEKSNKKI 725
Query: 225 ---RQRA-ELLEKVESMK---KKLPWLKYDMK 249
QR EL++K++ + K LK+ M+
Sbjct: 726 IMQNQRIQELMDKIDQKEDTINKFQNLKFHME 757
Score = 49 (22.3 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
K EE ++++ D + ++ L E + +LKT T++ N+LK N ++EK E
Sbjct: 828 KKSEEMQESISDEE-NIR--LLQENNEELKTRLLTIE------NELK--NEKEEK-TELN 875
Query: 225 RQRAELLEKVESMKKK 240
+Q L +++ S +KK
Sbjct: 876 KQIVSLQQELSSSEKK 891
Score = 48 (22.0 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 31/107 (28%), Positives = 49/107 (45%)
Query: 157 EFAKLSPVKL--LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL------- 207
E K S K +EE E+ + Q V+ ++++LK IE K+N D L
Sbjct: 1032 EIVKTSSKKTHQIEELEQQIEKLQAEVKD--YTNENNRLK-IEEREKKNQDDLLKEKDSL 1088
Query: 208 -NQLK--------ALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
QLK +L++E + VE R +EL++ V K K+ L+
Sbjct: 1089 IQQLKEEVQEKTISLDIEVQHVVEGKRALSELMQDVTCYKVKIKELE 1135
Score = 45 (20.9 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 12/55 (21%), Positives = 33/55 (60%)
Query: 365 EPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 419
E +IEKL +++ + + N+ ++++ EK+ NQ+ L L++ ++ ++++
Sbjct: 1045 EELEQQIEKLQAEVKDYTNENNRLKIEEREKK---NQDDL-LKEKDSLIQQLKEE 1095
Score = 45 (20.9 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 19/100 (19%), Positives = 47/100 (47%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL-LHA 426
H +E + + E+ V+ + K+ + E+ L Q + + +KD ++NN+L +
Sbjct: 1020 HSTVEAIWEECKEI-VKTSSKKTHQIEE---LEQQ---IEKLQAEVKDYTNENNRLKIEE 1072
Query: 427 LRNSGAENIF-EAYCWLQQHRHELNKEAYGPVLLEVNVSN 465
+++ E +QQ + E+ ++ + L++ V +
Sbjct: 1073 REKKNQDDLLKEKDSLIQQLKEEVQEKT---ISLDIEVQH 1109
Score = 44 (20.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 365 EPPHD-KIEKLGSQILELGVQANQKRLQKSEKEKI-----LNQNKLTLRQCSDRLKDMED 418
E PH ++ +L + +L R Q +E E++ +N + LTL +C LK+ E
Sbjct: 367 EIPHVIRVSELS--LCDLAGSERSMRTQ-NEGERLRETGNINTSLLTLGKCISVLKNSE- 422
Query: 419 KNNKLLHA-LRNSGAENIFEAY 439
K+ H R S + F+++
Sbjct: 423 KSKFQQHVPFRESKLTHYFQSF 444
Score = 43 (20.2 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 186 LVEKSSKLKTIE-CTVKRNGDT--LNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+VE ++ +E K+N +T +++ +E +K + +LL+ +E +KKKL
Sbjct: 531 VVEDEDLVEDLEKAEEKQNVETEFIDEDLHDTLEDDKAFSSHAGKRKLLDLIEDLKKKL 589
>MGI|MGI:2154049 [details] [associations]
symbol:Smc1b "structural maintenance of chromosomes 1B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IDA] [GO:0000795 "synaptonemal complex" evidence=IDA]
[GO:0000800 "lateral element" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IDA] [GO:0007126 "meiosis"
evidence=IPI] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0030893 "meiotic cohesin complex" evidence=ISO;IDA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IDA] [GO:0051276
"chromosome organization" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 MGI:MGI:2154049 GO:GO:0005524
GO:GO:0007126 GO:GO:0005654 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 Reactome:REACT_118161 Reactome:REACT_120463
Reactome:REACT_75800 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0034991
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636
GeneTree:ENSGT00580000081569 CTD:27127 OMA:QLYHNEK EMBL:AF303827
IPI:IPI00120490 RefSeq:NP_536718.1 UniGene:Mm.182737
ProteinModelPortal:Q920F6 SMR:Q920F6 STRING:Q920F6
PhosphoSite:Q920F6 PaxDb:Q920F6 PRIDE:Q920F6
Ensembl:ENSMUST00000023068 GeneID:140557 KEGG:mmu:140557
InParanoid:Q920F6 OrthoDB:EOG4RNB7M NextBio:369861 Bgee:Q920F6
CleanEx:MM_SMC1B Genevestigator:Q920F6
GermOnline:ENSMUSG00000022432 Uniprot:Q920F6
Length = 1248
Score = 101 (40.6 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 67/385 (17%), Positives = 166/385 (43%)
Query: 645 QTEQRLIEDEAAK--LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
Q +++L + K +QK +E+I N+ + E+ + +E + +++ +++ + N
Sbjct: 827 QLKKKLNNIDTLKTTIQKGKEDIDNLKKTEEECLKIVEE-LMVKQEQIKEVLATQSSN-- 883
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMA--SIEFDAKIRELEFNLK 760
+ K+ Q + + E+ L E+V + S +K + ++ D K+++++ +L
Sbjct: 884 IEKIHIQIEEERKKVLAVDREVGKLQKEVVIIQGSLEQKLLEKHNLLLDCKVQDIDISLV 943
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE-ELE 819
+L+ + E + E + + K + I + + + L+ +E L
Sbjct: 944 LG---SLEDIIEMELTETESTQATADIYE-KEASIQIDYSPLREDLKALQSDKEVEAHLT 999
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQR---QIEDLSTKQEADKKELKRFLAEIDALKE 876
+Q SQ N++ L+ E+ + + ++ + EA +KE + E + +K
Sbjct: 1000 LLLQQVASQENTLLKTTAPNLRAQENLKTVRDKFQESADVFEASRKEARICRQEFEQVKR 1059
Query: 877 KWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQSGQLEVL 935
+ I+ + + ++++ + E+ + + I G+ +
Sbjct: 1060 RRYDAFSQCFEHISVSIDQIYKKLCRNNSAQAFLSPENPEEPYLDGISYNCVAPGK-RFM 1118
Query: 936 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNT 995
+ SGGE+ V+ + L ++ PF V+DE++ +D N K+ ++ SQ
Sbjct: 1119 PMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKV-SSYIKEQSQEQF 1177
Query: 996 PQCFLLTPKLLPDLEYSEACSILNI 1020
Q +++ L + YS+A +++ +
Sbjct: 1178 -QMIIIS---LKEEFYSKADALIGV 1198
Score = 97 (39.2 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 59/240 (24%), Positives = 102/240 (42%)
Query: 21 GNIIEIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
G++ + + NF ++ + P R +IGPNGSGKS+++ A++ +G T L R +
Sbjct: 2 GHLELLLVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKTTNL-RVKN 60
Query: 80 I-----GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVL 133
I GA+ K S + I D+ EE T R I SE+ F K V + +
Sbjct: 61 IQELIHGAHTGKPVSSSASVTIIYIEDSGEEK-TFTRII-RGGCSEYHFGDKPVSRSVYV 118
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
+ I V + Q V + P + + E+ + ++ A +K K
Sbjct: 119 AQLENIGIIVKAQNCLVFQGTVESISMKKPKERTQFFEEISTSGEFIGEYEAKKKKLQKA 178
Query: 194 KT---IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKK 250
+ VK+N + K +E+E + E + E L K+ ++ L L Y+ +K
Sbjct: 179 EEDAQFHFNVKKN--VAAERKHAKIEKE-EAEHYQNLLEEL-KINKIQLMLFQLYYNEEK 234
Score = 43 (20.2 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 364 YEPPHDKIEKLGSQILELG-VQANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKN 420
+E +K E+L + G Q N K++++ E +K + + + + C D L+D + +
Sbjct: 398 WEQKAEK-ERLAFEKRRHGDTQGNLKQIKEQIEEHKKRIEKLEEYTKTCMDCLEDKKQQE 456
Query: 421 NKLLHALRNS 430
L + N+
Sbjct: 457 EALKKEIENT 466
Score = 41 (19.5 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 9/43 (20%), Positives = 24/43 (55%)
Query: 392 KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 434
K ++E+ L K + R+ ++ ++ + + + L+N+G +N
Sbjct: 452 KKQQEEAL---KKEIENTKSRMSEVNEELSLIRNELQNAGIDN 491
>ZFIN|ZDB-GENE-060503-506 [details] [associations]
symbol:si:ch211-250g4.3 "si:ch211-250g4.3"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
ZFIN:ZDB-GENE-060503-506 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG41JZBB GeneTree:ENSGT00700000104373 eggNOG:NOG255112
EMBL:CR385063 IPI:IPI01005290 UniGene:Dr.156482
Ensembl:ENSDART00000139999 OMA:LERTITH Uniprot:Q1L949
Length = 1041
Score = 132 (51.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 63/269 (23%), Positives = 125/269 (46%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLR-KRKLESIEKEDDINTALAKL 706
QR+ + E AK+ KE+EE I I + E R+ RE +N K + E + + + + +
Sbjct: 542 QRVNDVEKAKILKEKEESIRIRE-EARQERETTELVNAEIKAEKERLNQRQE---EMLRE 597
Query: 707 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 766
+ + + + EI+N ++ ++ EK A I+ +I ++E +++ +K
Sbjct: 598 RQEIERIKHETLRAKEEIENSQ-DVTIREYEKMEKMKAEIQ--GQIEDIEKKVEEIQKTK 654
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEK-EFL--EMPTTIEELEAAIQ 823
Q E+ K E+E R+ L + KR ++ E+E+ EFL E+ EE+E+ +
Sbjct: 655 EQM----EEAKVELEEEREDL-ERKRD-----LVSREIEQAEFLRNEILRVKEEMESRWR 704
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 883
+ ++ + Q+ L+ E + + E E K EL + +D LK +
Sbjct: 705 ETETEEVELRAKTQHELERLEKLREETERSQKNIEESKIELMLWKESLDKLKGEMEEDKH 764
Query: 884 NLVAQINETFSRNFQEMAVAGEVSLDEHE 912
++ Q+NE ++ Q V ++ ++ E
Sbjct: 765 VVIMQMNEAKAKEEQLTMVIEQLEIERGE 793
Score = 59 (25.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKG-EVLEITKRFNIQVNNLTQFLPQDRVC-EFA 159
KE+ L M+ R + E NG++V K E +E K +IQ + ++ D + E
Sbjct: 421 KEKDLEEMKHEIERGREELVMNGELVKKEWEKIEQAK-VDIQSHMISMEGRVDEIKRETE 479
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK---LKTIE----CTVKRNGDTLNQLKA 212
+L +K + +K + Q A E K + T E ++R D L ++A
Sbjct: 480 RLKHIKTEMQRDKDALEKQKDDTRKAKEEAERKRYEIVTEELEHRARLQRERDELENIRA 539
Query: 213 LNVEQEKDVERVRQRAELLEKVESMK 238
+++ DVE+ + L EK ES++
Sbjct: 540 -EMQRVNDVEKAKI---LKEKEESIR 561
>UNIPROTKB|F1N6C8 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9913 "Bos taurus" [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
GeneTree:ENSGT00580000081569 OMA:QLYHNEK EMBL:DAAA02014929
EMBL:DAAA02014930 IPI:IPI00697785 ProteinModelPortal:F1N6C8
PRIDE:F1N6C8 Ensembl:ENSBTAT00000014005 Uniprot:F1N6C8
Length = 1235
Score = 112 (44.5 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 66/293 (22%), Positives = 120/293 (40%)
Query: 28 LHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI-----G 81
+ NF ++ + P R +IGPNGSGKS+++ A++ +G L R +I G
Sbjct: 9 VENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKIANL-RVKNIQELIHG 67
Query: 82 AYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFN 140
A++ K S +KI ++ EE T R I SE+ FN + + + ++
Sbjct: 68 AHIGKPVSSSASVKIVYLEESGEEK-TFARTI-RGGCSEYSFNDNPMSRSAYITELEKIG 125
Query: 141 IQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTV 200
I V + Q V + P + + E+ +L ++ EK KL E
Sbjct: 126 IIVKARNCLVFQGTVESISMKKPKERTQFFEEISTSGELIGEY---EEKKRKLHKAEEDA 182
Query: 201 KRNGDTLNQLKALNVEQEKDVERVRQRAELLE--KVESMKKKLPWLKYDMKKAEYIXXXX 258
+ N + + A + + E + LLE K+ ++ +L L ++ KK ++
Sbjct: 183 QFNFNKKKNVAAERKHAKLEKEEADRYQNLLEELKINKIQLQLFRLYHNEKKINFLYTEL 242
Query: 259 XXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDG-------DCKKLSSLINE 304
+ HE ++ KK+E +L + K L +L+N+
Sbjct: 243 ERVNKNLSVTRESLSHHE--NIVKAKKKEHGMLSRQLQQTQKELKSLEALLNQ 293
Score = 81 (33.6 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 70/382 (18%), Positives = 160/382 (41%)
Query: 653 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAAD 712
++ L+K E + IV K++++++ + +E ++ + I K + A D
Sbjct: 847 EDTDHLKKVEENCLKIVDELMEKQQQLKDEFVTQNTNVEKVQAQ--IEEERKKFL--AID 902
Query: 713 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLH 772
+ +++ K +++ S + + EKH ++ D K++++E L +L +
Sbjct: 903 REVGKWQ-----KEVVILQSSLEQNRLEKH--NMLLDCKVQDIEIVLLLG---SLDDIIE 952
Query: 773 YEDCKKEVEHCRKHLSDAKRQA-ESIAFITPELE--KEFLEMPTTIEELEAAIQDNISQA 829
E+ K + A E A I + +E L+ + +E+EA ++ + Q
Sbjct: 953 VEEGGKASSGTEAEGTQATTDIYEKEAAIEVDYSSLREDLKALQSDKEIEAQLRLLLQQV 1012
Query: 830 NSIFFLNQNILQEYEHRQRQIEDLSTKQ----------EADKKELKRFLAEIDALKEKWL 879
S +L+ R +E+L T + EA +KE + E + +K++
Sbjct: 1013 AS---QEDILLKTAAPNLRAVENLKTVRDKFQESIDAFEASRKEARICRQEFEQVKKRRY 1069
Query: 880 PTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQSGQLEVLSAH 938
I+ + + ++++ + E+ + + I G+ +
Sbjct: 1070 DLFNQCFEHISISIDQIYKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGK-RFMPMD 1128
Query: 939 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQC 998
+ SGGE+ V+ + L ++ PF V+DE++ +D N K+ ++ +Q Q
Sbjct: 1129 NLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKV-SSYIKEQTQEQF-QM 1186
Query: 999 FLLTPKLLPDLEYSEACSILNI 1020
+++ L + YS+A +++ I
Sbjct: 1187 IIIS---LKEEFYSKADALIGI 1205
Score = 61 (26.5 bits), Expect = 0.00031, Sum P(4) = 0.00031
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDINTALAKLVDQ 709
IED +++K E K K+ + EN +N + K K E +++N ++L +
Sbjct: 428 IEDHKKRIEKLEEYTKTCTNCLKEKKEQEENLVNEIEKTKSRMSEVNEELNLIRSELQNA 487
Query: 710 AAD 712
D
Sbjct: 488 GID 490
Score = 61 (26.5 bits), Expect = 0.00031, Sum P(4) = 0.00031
Identities = 33/141 (23%), Positives = 62/141 (43%)
Query: 747 EFDAKIRELEFNLKQHE-KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELE 805
+ A I+ LK + +L + H +E + L + + Q ++ E +
Sbjct: 700 QIQALIQGTTTRLKYAQSELEIIKKKHLAAFYREQSQLQSELLNIESQCAMLSEGIKERQ 759
Query: 806 KEFLEMPTTIEELEAAI-Q---DNISQANSIFFLNQNILQEYEHRQRQIE------DLST 855
+ E I+++E I Q + I N F N++I Q+ E Q+++E L+
Sbjct: 760 QRIKEFQRKIDKVEDDIFQHFCEEIGVENIREFENKHIKQQQEADQKRLEFEKQKTRLNI 819
Query: 856 KQEADKKELKRFLAEIDALKE 876
+ E + LK+ L +I+ LKE
Sbjct: 820 QLEYSRNHLKKKLNKINTLKE 840
Score = 47 (21.6 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
+ I + ++ ++ +A+QKRL+ +++ LN + L + LK +K N L A+
Sbjct: 787 ENIREFENKHIKQQQEADQKRLEFEKQKTRLN---IQLEYSRNHLKKKLNKINTLKEAIE 843
Query: 429 NSGAEN 434
G E+
Sbjct: 844 K-GRED 848
Score = 42 (19.8 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 11/51 (21%), Positives = 29/51 (56%)
Query: 383 VQANQKRLQKS---EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNS 430
VQ N K++++ K++I + T + C++ LK+ +++ L++ + +
Sbjct: 417 VQENIKQIKEQIEDHKKRIEKLEEYT-KTCTNCLKEKKEQEENLVNEIEKT 466
Score = 38 (18.4 bits), Expect = 0.00031, Sum P(4) = 0.00031
Identities = 11/53 (20%), Positives = 25/53 (47%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
++++ ++ L NQKR Q + ++ + + L +KD E + +K
Sbjct: 276 QLQQTQKELKSLEALLNQKRPQYIKAKENTSHHLKKLDMAKKSIKDSEKQCSK 328
>SGD|S000004076 [details] [associations]
symbol:SMC4 "Subunit of the condensin complex" species:4932
"Saccharomyces cerevisiae" [GO:0007076 "mitotic chromosome
condensation" evidence=IMP;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IGI;IDA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0000799 "nuclear condensin complex" evidence=TAS;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0070058
"tRNA gene clustering" evidence=IMP] [GO:0032116 "SMC loading
complex" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
SGD:S000004076 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0051301 GO:GO:0006281 GO:GO:0003682 EMBL:BK006945
GO:GO:0016887 GO:GO:0006310 GO:GO:0007076 EMBL:U53880 GO:GO:0000799
GO:GO:0070058 EMBL:Z73259 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
HOGENOM:HOG000184777 OrthoDB:EOG4WM82V EMBL:Z73258 PIR:S64918
RefSeq:NP_013187.1 ProteinModelPortal:Q12267 SMR:Q12267
DIP:DIP-3007N IntAct:Q12267 MINT:MINT-436885 STRING:Q12267
PaxDb:Q12267 EnsemblFungi:YLR086W GeneID:850775 KEGG:sce:YLR086W
CYGD:YLR086w NextBio:966951 Genevestigator:Q12267
GermOnline:YLR086W Uniprot:Q12267
Length = 1418
Score = 106 (42.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 77/361 (21%), Positives = 153/361 (42%)
Query: 648 QRLIEDEAAKLQKEREEIINIV-QIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 706
Q+L+++ ++ +E+ I Q++ K EN N+ E++ + ++ +L
Sbjct: 1013 QKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMN----ETLNLKVELKEQSEQL 1068
Query: 707 VDQAADL--NIQQFK-YAIEIKNLLVEIVSCKWSYAEKHMASIEF---DAKIRELEFNL- 759
+Q D+ +I +FK IE+KN L ++ S +Y + + E + IR++ L
Sbjct: 1069 KEQMEDMEESINEFKSIEIEMKNKLEKLNSLL-TYIKSEITQQEKGLNELSIRDVTHTLG 1127
Query: 760 ----------KQHEKLALQASLHYEDCK-------KEVE-HCRK-HLSDAKRQAESIAFI 800
K+ K + Y C+ K+ E C H + ++ ++
Sbjct: 1128 MLDDNKMDSVKEDVKNNQELDQEYRSCETQDESEIKDAETSCDNYHPMNIDETSDEVSRG 1187
Query: 801 TPEL-EKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIE--DLSTKQ 857
P L E E E+ +E +E+ I + +S ++ +L+EY R + + L
Sbjct: 1188 IPRLSEDELRELD--VELIESKINE-LSYYVEETNVDIGVLEEYARRLAEFKRRKLDLNN 1244
Query: 858 EADKK-ELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFD 916
K+ E+K ++ LK+K I+ T +Q + + G L+ +S D
Sbjct: 1245 AVQKRDEVKE---QLGILKKKRFDEFMAGFNIISMTLKEMYQMITMGGNAELELVDS-LD 1300
Query: 917 KF--GILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGM 974
F G+ V + + + SGGE+++S++ + +L P V+DEI+ +
Sbjct: 1301 PFSEGVTFSVMPPKKSWRNITNL---SGGEKTLSSLALVFALHKYKPTPLYVMDEIDAAL 1357
Query: 975 D 975
D
Sbjct: 1358 D 1358
Score = 89 (36.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 63/297 (21%), Positives = 117/297 (39%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I E+ L NF ++ + P + + V+GPNGSGKS+++ ++ G + R +
Sbjct: 156 INELVLENFKSYAGKQVVGPFHTSFSAVVGPNGSGKSNVIDSMLFVFGFRANKM-RQDRL 214
Query: 81 GAYVKRGE-----ESGYIKISL-----------RGDTKEEHLTIMRKIDTRNKSEWFFNG 124
+ + E +S + + R D ++ L I RK N S+++ N
Sbjct: 215 SDLIHKSEAFPSLQSCSVAVHFQYVIDESSGTSRIDEEKPGLIITRKAFKNNSSKYYINE 274
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHC 184
K EV ++ K I +++ + Q V A++ P + EK D L
Sbjct: 275 KESSYTEVTKLLKNEGIDLDHKRFLILQGEVENIAQMKP-----KAEKESDDGLLEYLE- 328
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
++ ++ IE +R G N L + +E+E E V + LE + L +L
Sbjct: 329 DIIGTANYKPLIE---ERMGQIEN-LNEVCLEKENRFEIVDREKNSLES--GKETALEFL 382
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL 301
+ + K+ + +TL + S + + EK KK+ +
Sbjct: 383 EKE-KQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEI 438
Score = 80 (33.2 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 142 QVNNLTQFLPQDR-VCEFAKLSPVKLLEETEKAV--GDPQLPVQHCALVEKSSKLKTIEC 198
++ +LTQ L ++R + + KLS + + + +L L EK S+++ E
Sbjct: 518 EIKDLTQLLEKERSILDDIKLSLKDKTKNISAEIIRHEKELEPWDLQLQEKESQIQLAES 577
Query: 199 TVKRNGDTLNQLKALNVE--QEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ +T +LK NVE +EK + + + EL + + +KKKL LK + + E
Sbjct: 578 ELSLLEETQAKLKK-NVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGE 632
Score = 47 (21.6 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 390 LQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL--LHALRNSGAENIF 436
L+ E +K+LN ++ + L ++K+ L L L+ SG N F
Sbjct: 640 LKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSGRINGF 688
Score = 46 (21.3 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 373 KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 423
KLG+ + + + K E+E L++ + R SD + +ME++ KL
Sbjct: 834 KLGTNQSDKVDDYTPEEVDKIERE--LSERENNFRVASDTVHEMEEELKKL 882
>RGD|3138 [details] [associations]
symbol:Myh3 "myosin, heavy chain 3, skeletal muscle, embryonic"
species:10116 "Rattus norvegicus" [GO:0003774 "motor activity"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016459 "myosin complex" evidence=ISO] [GO:0030016
"myofibril" evidence=IEA] [GO:0032982 "myosin filament" evidence=IEA]
[GO:0043292 "contractile fiber" evidence=ISO] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063
Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 RGD:3138 GO:GO:0005524 GO:GO:0030016
GO:GO:0003774 eggNOG:COG5022 GO:GO:0032982 HOVERGEN:HBG004704
KO:K10352 InterPro:IPR015650 PANTHER:PTHR13140:SF22
HOGENOM:HOG000173959 OrthoDB:EOG43N7BR CTD:4621 EMBL:X04267
IPI:IPI00201578 PIR:A24922 RefSeq:NP_036736.1 UniGene:Rn.98847
ProteinModelPortal:P12847 SMR:P12847 STRING:P12847 PRIDE:P12847
GeneID:24583 KEGG:rno:24583 UCSC:RGD:3138 InParanoid:P12847
NextBio:603750 ArrayExpress:P12847 Genevestigator:P12847
GermOnline:ENSRNOG00000031497 Uniprot:P12847
Length = 1940
Score = 135 (52.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 72/296 (24%), Positives = 126/296 (42%)
Query: 654 EAAKLQKEREEI--INIVQIEKRKRREMENHINLRKRKLE--SIEKEDDINTALAKLVDQ 709
E +L + EE + QIE K+RE E + LR R LE +++ E + T K D
Sbjct: 1143 ELEELSERLEEAGGVTSTQIELNKKREAE-FLKLR-RDLEEATLQHEATVATLRKKHADS 1200
Query: 710 AADL-----NIQQFKYAIEIKN----LLVEIVSCKWSYAEKHMASIEFDAKI-RELEFNL 759
AA+L N+Q+ K +E + L ++ +S K A++E KI R LE L
Sbjct: 1201 AAELAEQIDNLQRVKQKLEKEKSEFKLEIDDLSSSVESVSKSKANLE---KICRTLEDQL 1257
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
+ + + + + + RQ E I +L + IEEL+
Sbjct: 1258 SEARGKNEETQRSLSELTTQKSRLQTEAGELSRQLEEKESIVSQLSRSKQAFTQQIEELK 1317
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 879
+++ N++ Q+ + + + Q E+ +QE K EL+R L++ ++ +W
Sbjct: 1318 RQLEEENKAKNALAHALQSSRHDCDLLREQYEE---EQEG-KAELQRALSKANSEVAQWR 1373
Query: 880 PTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL 935
Q E +++A + S ++ E+ K L K K R G++E L
Sbjct: 1374 TKYETDAIQRTEELEEAKKKLAQRLQDSEEQVEAVNAKCASLEKTKQRLQGEVEDL 1429
Score = 61 (26.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 47/254 (18%), Positives = 95/254 (37%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVE-QEKDVERVRQRAELLEKVESMKKKLPWLKY 246
E ++ T++ ++ D L + +A E +EK V V+++ +L +V++ + L L
Sbjct: 845 ETEKEMATMKEEFQKTKDELAKSEAKRKELEEKLVTLVQEKNDLQLQVQAESENL--LDA 902
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS 306
+ + + I E + + KK++ L+ +C +L I++
Sbjct: 903 EERCDQLIKAKFQLEAKIKEVTERAEDEEEINAELTAKKRK---LEDECSELKKDIDDLE 959
Query: 307 KRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEP 366
L KV+ K K + R QT+ +
Sbjct: 960 LT----LAKVEKEKHATENKVKNLTEELAGLDETIAKL--TREKKALQEAHQQTLDDLQA 1013
Query: 367 PHDKIEKLGS--QILELGVQANQKRLQKSEKEKI-LNQNKLTL----RQCSDRLKDMEDK 419
DK+ L LE V + L++ +K ++ L +NK L + + + D+E+
Sbjct: 1014 EEDKVNSLSKLKSKLEQQVDDLESSLEQEKKLRVDLERNKRKLEGDLKLAQESILDLEND 1073
Query: 420 NNKLLHALRNSGAE 433
+L L+ E
Sbjct: 1074 KQQLDERLKKKDFE 1087
Score = 51 (23.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD 415
KI++L ++I EL + +R +++ EK + L + S+RL++
Sbjct: 1108 KIKELQARIEELEEEIEAERATRAKTEKQRSDYARELEELSERLEE 1153
>UNIPROTKB|G3V6D8 [details] [associations]
symbol:Myh4 "Myosin-4" species:10116 "Rattus norvegicus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016459 "myosin complex" evidence=IEA] [GO:0043292 "contractile
fiber" evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 RGD:3139 GO:GO:0005524 EMBL:CH473948 GO:GO:0003774
GO:GO:0016459 InterPro:IPR015650 PANTHER:PTHR13140:SF22 OMA:NGYRGKK
Ensembl:ENSRNOT00000004147 Uniprot:G3V6D8
Length = 1940
Score = 135 (52.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 72/296 (24%), Positives = 126/296 (42%)
Query: 654 EAAKLQKEREEI--INIVQIEKRKRREMENHINLRKRKLE--SIEKEDDINTALAKLVDQ 709
E +L + EE + QIE K+RE E + LR R LE +++ E + T K D
Sbjct: 1143 ELEELSERLEEAGGVTSTQIELNKKREAE-FLKLR-RDLEEATLQHEATVATLRKKHADS 1200
Query: 710 AADL-----NIQQFKYAIEIKN----LLVEIVSCKWSYAEKHMASIEFDAKI-RELEFNL 759
AA+L N+Q+ K +E + L ++ +S K A++E KI R LE L
Sbjct: 1201 AAELAEQIDNLQRVKQKLEKEKSEFKLEIDDLSSSVESVSKSKANLE---KICRTLEDQL 1257
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
+ + + + + + RQ E I +L + IEEL+
Sbjct: 1258 SEARGKNEETQRSLSELTTQKSRLQTEAGELSRQLEEKESIVSQLSRSKQAFTQQIEELK 1317
Query: 820 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 879
+++ N++ Q+ + + + Q E+ +QE K EL+R L++ ++ +W
Sbjct: 1318 RQLEEENKAKNALAHALQSSRHDCDLLREQYEE---EQEG-KAELQRALSKANSEVAQWR 1373
Query: 880 PTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL 935
Q E +++A + S ++ E+ K L K K R G++E L
Sbjct: 1374 TKYETDAIQRTEELEEAKKKLAQRLQDSEEQVEAVNAKCASLEKTKQRLQGEVEDL 1429
Score = 61 (26.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 47/254 (18%), Positives = 95/254 (37%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVE-QEKDVERVRQRAELLEKVESMKKKLPWLKY 246
E ++ T++ ++ D L + +A E +EK V V+++ +L +V++ + L L
Sbjct: 845 ETEKEMATMKEEFQKTKDELAKSEAKRKELEEKLVTLVQEKNDLQLQVQAESENL--LDA 902
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS 306
+ + + I E + + KK++ L+ +C +L I++
Sbjct: 903 EERCDQLIKAKFQLEAKIKEVTERAEDEEEINAELTAKKRK---LEDECSELKKDIDDLE 959
Query: 307 KRRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEP 366
L KV+ K K + R QT+ +
Sbjct: 960 LT----LAKVEKEKHATENKVKNLTEELAGLDETIAKL--TREKKALQEAHQQTLDDLQA 1013
Query: 367 PHDKIEKLGS--QILELGVQANQKRLQKSEKEKI-LNQNKLTL----RQCSDRLKDMEDK 419
DK+ L LE V + L++ +K ++ L +NK L + + + D+E+
Sbjct: 1014 EEDKVNSLSKLKSKLEQQVDDLESSLEQEKKLRVDLERNKRKLEGDLKLAQESILDLEND 1073
Query: 420 NNKLLHALRNSGAE 433
+L L+ E
Sbjct: 1074 KQQLDERLKKKDFE 1087
Score = 51 (23.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD 415
KI++L ++I EL + +R +++ EK + L + S+RL++
Sbjct: 1108 KIKELQARIEELEEEIEAERATRAKTEKQRSDYARELEELSERLEE 1153
>MGI|MGI:109153 [details] [associations]
symbol:Ktn1 "kinectin 1" species:10090 "Mus musculus"
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0007018
"microtubule-based movement" evidence=TAS] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=TAS] InterPro:IPR024854
MGI:MGI:109153 GO:GO:0005783 GO:GO:0016021 GO:GO:0005789
GO:GO:0007018 GO:GO:0019894 CTD:3895 eggNOG:NOG149793
HOVERGEN:HBG007851 OrthoDB:EOG4Z62N5 PANTHER:PTHR18864 EMBL:L43326
EMBL:AK040200 EMBL:AJ517365 EMBL:AJ517366 EMBL:AJ517367
EMBL:AJ517368 EMBL:AJ517369 EMBL:AJ517370 EMBL:AJ517371
EMBL:AJ517372 EMBL:AJ517373 EMBL:AJ517374 EMBL:AJ517375
EMBL:AJ517376 EMBL:AJ517377 EMBL:AJ517378 EMBL:AJ517379
EMBL:AJ517380 EMBL:AJ517381 EMBL:AJ517382 EMBL:AJ517383
EMBL:AJ517384 IPI:IPI00122559 IPI:IPI00407517 IPI:IPI00473546
IPI:IPI00759851 IPI:IPI00759887 IPI:IPI00759913 IPI:IPI00759916
IPI:IPI00759936 IPI:IPI00759943 IPI:IPI00759952 IPI:IPI00759972
IPI:IPI00760003 IPI:IPI00760049 IPI:IPI00760053 IPI:IPI00760076
IPI:IPI00760078 RefSeq:NP_032503.2 UniGene:Mm.3110
ProteinModelPortal:Q61595 IntAct:Q61595 STRING:Q61595
PhosphoSite:Q61595 PaxDb:Q61595 PRIDE:Q61595 GeneID:16709
KEGG:mmu:16709 UCSC:uc007til.1 UCSC:uc007tim.1 InParanoid:Q61595
NextBio:290490 CleanEx:MM_KTN1 Genevestigator:Q61595
GermOnline:ENSMUSG00000021843 Uniprot:Q61595
Length = 1327
Score = 116 (45.9 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 69/326 (21%), Positives = 133/326 (40%)
Query: 659 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQ 717
+K E + + EK + + R++ +E+IE E D+ L V ++LN +
Sbjct: 1010 EKNWEAMEALASTEKMLQDRVNKTSKERRQHVEAIELESKDLLKRLFPTVSVPSNLNYSE 1069
Query: 718 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 777
+ E K +C ++ + + +++E + H L L+ Y+
Sbjct: 1070 WLRGFEKK-----AKACVAGTSDAEAVKV-LEHRLKEAS---EMHTLLQLECE-KYKSVL 1119
Query: 778 KEVEHCRKHLSDAKRQAESIAFI-TPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLN 836
E E + L + Q ES I E ++ +M ++ E ++ + Q N
Sbjct: 1120 AETEGILQKLQRSVEQEESKWKIKADESQRMIKQMQSSFTASERELE-RLRQENKDM--- 1175
Query: 837 QNILQEYEHRQRQIEDLSTKQEA---DKKELKRFLAEIDA-LKEKWLPTLR-----NLV- 886
+N+ +E EH + ++E ++ + +ELK L E+ L + + +R NL+
Sbjct: 1176 ENLRREREHLEMELEKAEMERSTYVMEVRELKDLLTELQKKLDDSYSEAVRQNEELNLLK 1235
Query: 887 AQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERS 946
Q+NET S+ E +V+ D H++ I K+ + +G V+ S S
Sbjct: 1236 TQLNETHSKLQNEQTERKKVADDLHKAQQSLNSIHSKISLKAAGDTVVIENSDISPEMES 1295
Query: 947 VSTILYLVSLQDLTNCPFRVVDEINQ 972
VSL +++ E+NQ
Sbjct: 1296 PEKETMSVSLNQTVTQLQQLLQEVNQ 1321
Score = 63 (27.2 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 391 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHE 448
Q E E +L + +++ +LKD E +K+ L+ EN F C L +H+
Sbjct: 907 QFEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKF-LKCQLSHQKHQ 963
Score = 61 (26.5 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 38/138 (27%), Positives = 67/138 (48%)
Query: 101 TKEEHLTIMRKIDTRNKSE---W--FFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRV 155
+KEE L ++ ++ K+E W N + EV ++ K +++ + + + L +
Sbjct: 635 SKEEELKDVQNMNFLLKAEVQKWQALANEQAATAHEVEKMQKSIHVKEDEI-RLLEEQLQ 693
Query: 156 CEFA-KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALN 214
E A K+ +K+L E KA+ Q V+ KL+T + + N D + Q++
Sbjct: 694 HEVASKMEELKILSEQNKAL---QSEVR---------KLQTA-VSQQPNKDVVEQME--K 738
Query: 215 VEQEKDVERVRQRAELLE 232
QEKD E++R ELLE
Sbjct: 739 CIQEKD-EKLRTVEELLE 755
Score = 53 (23.7 bits), Expect = 0.00077, Sum P(4) = 0.00077
Identities = 23/85 (27%), Positives = 35/85 (41%)
Query: 159 AKLSPVKLLEETEKAVG--DPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE 216
A+ S L EE K + D QL +L + L + E +K D N L E
Sbjct: 597 AQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELK---DVQNMNFLLKAE 653
Query: 217 QEKDVERVRQRAELLEKVESMKKKL 241
+K ++A +VE M+K +
Sbjct: 654 VQKWQALANEQAATAHEVEKMQKSI 678
Score = 37 (18.1 bits), Expect = 0.00077, Sum P(4) = 0.00077
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 88 EESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
E+SG IK +L+ K E ++ ++ + +
Sbjct: 313 EKSGVIKEALKKSNKGELSGLLHQLQEKER 342
>SGD|S000005194 [details] [associations]
symbol:RAD50 "Subunit of MRX complex with Mre11p and Xrs2p"
species:4932 "Saccharomyces cerevisiae" [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030870 "Mre11 complex"
evidence=IEA;IPI] [GO:0003691 "double-stranded telomeric DNA
binding" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006284 "base-excision repair" evidence=IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA;IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IDA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IMP] [GO:0032078 "negative regulation of
endodeoxyribonuclease activity" evidence=IDA] [GO:0051880
"G-quadruplex DNA binding" evidence=IDA] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IDA] [GO:0000706
"meiotic DNA double-strand break processing" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=ISS;IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA;IPI] [GO:0000722
"telomere maintenance via recombination" evidence=IMP] [GO:0042138
"meiotic DNA double-strand break formation" evidence=TAS]
[GO:0000727 "double-strand break repair via break-induced
replication" evidence=TAS] [GO:0000723 "telomere maintenance"
evidence=IMP] [GO:0004017 "adenylate kinase activity"
evidence=IMP;IDA] InterPro:IPR004584 InterPro:IPR007517
Pfam:PF04423 SGD:S000005194 GO:GO:0005739 GO:GO:0005524
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0008270
EMBL:BK006947 GO:GO:0016887 GO:GO:0004518 GO:GO:0000706
GO:GO:0006303 GO:GO:0000722 EMBL:X96722 GO:GO:0051880 GO:GO:0042138
GO:GO:0043047 GO:GO:0000727 Reactome:REACT_128851 GO:GO:0032078
GO:GO:0004017 eggNOG:COG0419 GO:GO:0030870 GO:GO:0003691 KO:K10866
InterPro:IPR013134 PANTHER:PTHR18867 TIGRFAMs:TIGR00606
PROSITE:PS51131 GeneTree:ENSGT00390000018781 HOGENOM:HOG000192269
OrthoDB:EOG4C2MJW EMBL:X14814 EMBL:Z71526 PIR:S05808
RefSeq:NP_014149.1 ProteinModelPortal:P12753 SMR:P12753
DIP:DIP-2419N IntAct:P12753 MINT:MINT-435300 STRING:P12753
PaxDb:P12753 PeptideAtlas:P12753 EnsemblFungi:YNL250W GeneID:855471
KEGG:sce:YNL250W CYGD:YNL250w OMA:ECFGANC NextBio:979418
Genevestigator:P12753 GermOnline:YNL250W Uniprot:P12753
Length = 1312
Score = 103 (41.3 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 53/245 (21%), Positives = 113/245 (46%)
Query: 674 RKRREMENHINLRKRKLE----SIE-KEDDINTALAKLVDQAADLNIQQFKYAIEIKNLL 728
R +RE N I+ R ++LE S++ K+D+ + L K+ ++ D+ ++ + + N L
Sbjct: 900 RSKRENINDIDSRVKELEARIISLKNKKDEAQSVLDKVKNER-DIQVRNKQKTVADINRL 958
Query: 729 VEIVSCKWSYAEKHMAS--IEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKH 786
++ ++ A E I+ELE N Q +L Q L + +E ++
Sbjct: 959 IDRFQTIYNEVVDFEAKGFDELQTTIKELELNKAQMLELKEQLDLKSNEVNEE----KRK 1014
Query: 787 LSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD-NISQANSIFFLNQNILQEYEH 845
L+D+ + +++ + E +E+ + ++ +E+ I ++ A + ++ QE
Sbjct: 1015 LADSNNEEKNL-----KQNLELIELKSQLQHIESEISRLDVQNAEA----ERDKYQEESL 1065
Query: 846 RQR-QIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAG 904
R R + E LS++ E+K+ +ID+L + LR I + + + + E+
Sbjct: 1066 RLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQ----LRTDYKDIEKNYHKEWVELQTRS 1121
Query: 905 EVSLD 909
V+ D
Sbjct: 1122 FVTDD 1126
Score = 67 (28.6 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 28 LHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGD 70
+ +F + D + G L L++G NGSGK++++ + A GD
Sbjct: 12 IRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGD 54
Score = 60 (26.2 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 369 DKIEKLGSQI--LELGVQANQKRLQKSEKEKILNQNKLT-LRQCSDRLKDMEDKNNKLLH 425
D++++L + I L+L Q L K + N+L L LKD + L +
Sbjct: 283 DQVKRLSNSIDILDLSKPDLQNLLANFSKVLMDKNNQLRDLETDISSLKDRQSSLQSLSN 342
Query: 426 AL-RNSGA-ENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYI--W 481
+L R G E E Y + H L KEA+ +SN +++ + V H + +
Sbjct: 343 SLIRRQGELEAGKETYEKNRNHLSSL-KEAFQHKFQ--GLSNIENSDMAQ--VNHEMSQF 397
Query: 482 KSFITQDAGDR-DFLAKNLK 500
K+FI+QD D D AK+++
Sbjct: 398 KAFISQDLTDTIDQFAKDIQ 417
Score = 54 (24.1 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 491 DRDFLAKNLKPFDV----PILNY-VSNESSRKEPFQISEEMRALGISARLDQVFDAPHAV 545
D + LA+ LK F LN+ + N + KE Q E I +L+Q + +
Sbjct: 450 DSEELAEKLKSFKSLSTQDSLNHELENLKTYKEKLQSWESEN---IIPKLNQKIEEKN-- 504
Query: 546 KEVLISQFGLDSSYIGSKETDQKADNVAKLGIL 578
E++I + ++ +T+Q+AD AKLG++
Sbjct: 505 NEMIILENQIEKFQDRIMKTNQQADLYAKLGLI 537
>UNIPROTKB|F5H0N7 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001878
SMART:SM00343 GO:GO:0005737 GO:GO:0008270 GO:GO:0003676
HGNC:HGNC:10461 ChiTaRS:CLIP1 EMBL:AC048338 EMBL:AC127002
EMBL:AC079406 EMBL:AC093016 IPI:IPI01013425 Ensembl:ENST00000545889
UCSC:uc001ucj.1 ArrayExpress:F5H0N7 Bgee:F5H0N7 Uniprot:F5H0N7
Length = 1013
Score = 118 (46.6 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 75/315 (23%), Positives = 143/315 (45%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRKRRE----MENHINLR-KRKLESIEKEDDINTA 702
QR +++ KL ++EE N++ + K RE ME + +R+ + I+ ++ +
Sbjct: 446 QRSMQETVNKLH-QKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEND 504
Query: 703 LAKLVDQAADLNIQQFKY--AIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
+A+++ + D + Q K + +K VE + K + A ++ + ++ I ++ +
Sbjct: 505 IAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQ--KSIEDMTVKAE 562
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPEL----EKEFLEMPTTIE 816
Q ++ A A H E+ KKE+E RK LSD +++ E+ EL E+ E T E
Sbjct: 563 QSQQEA--AKKHEEE-KKELE--RK-LSDLEKKMETSHNQCQELKARYERATSETKTKHE 616
Query: 817 E----LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK---------KE 863
E L+ + D + N +LQE E ++Q + Q A+ KE
Sbjct: 617 EILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKE 676
Query: 864 LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDK-FGI 920
LA ++ K+ L+N + + E +N +E+ + E+ E++ +F K
Sbjct: 677 KTETLASLEDTKQT-NAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIET 735
Query: 921 LIKVKFRQSGQLEVL 935
L + ++S QL L
Sbjct: 736 LKQAAAQKSQQLSAL 750
Score = 108 (43.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 71/304 (23%), Positives = 135/304 (44%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKR-REMENHINLRKRKLESI-EKEDDINTALAKLVD 708
IE Q E E + N E+ +EME LR + ++ I EKE+ + +KL D
Sbjct: 353 IEKMRLDYQHEIENLQNQQDSERAAHAKEMEA---LRAKLMKVIKEKENSLEAIRSKL-D 408
Query: 709 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDA-----KI--RELEFNLKQ 761
+A D ++ + + + K EI K++ A + S++ K+ +E +FN+
Sbjct: 409 KAEDQHLVEMEDTLN-KLQEAEIKKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLS 467
Query: 762 HEKLALQASLHYEDCK-KEVEHCRKHLSDAKRQAES-IAFI---TPELEKEFLEMPTTIE 816
+ L+ +L + K +E + + L AK + E+ IA I + + + +M +
Sbjct: 468 SDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELR 527
Query: 817 ELEAAIQD---NISQAN-SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 872
E +++ +++AN + FL ++I ++ ++ + K E +KKEL+R L+++
Sbjct: 528 LKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDL- 586
Query: 873 ALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDF-DKFGILIKVKFRQSGQ 931
EK + T N ++ + R E E L + D L + SG
Sbjct: 587 ---EKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGL 643
Query: 932 LEVL 935
L+ L
Sbjct: 644 LQEL 647
Score = 72 (30.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 40/161 (24%), Positives = 67/161 (41%)
Query: 86 RGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNN 145
R EE K L TK EH I ++++ +S F K LE T+ + +
Sbjct: 145 RVEEESITKGDLETQTKLEHARI-KELE---QSLLFEKTKADKLQRELEDTRVATVSEKS 200
Query: 146 LTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGD 205
L +D +++ ++ E+ K GD + + L E SS + +E T +
Sbjct: 201 RIMELEKDLALRVQEVAELRRRLESNKPAGDVDMSLS--LLQEISSLQEKLEVTRTDHQR 258
Query: 206 TLNQLK----ALNVEQEKDVERVRQRAELLEKV-ESMKKKL 241
+ LK A +K+++ + E L K ES+K KL
Sbjct: 259 EITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKL 299
>UNIPROTKB|F1NX73 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
GeneTree:ENSGT00580000081569 OMA:QLYHNEK EMBL:AADN02006734
IPI:IPI00572844 Ensembl:ENSGALT00000023005 Uniprot:F1NX73
Length = 1238
Score = 103 (41.3 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 72/352 (20%), Positives = 150/352 (42%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQA 710
E E A LQK+ E+ + V + + + +++ ++ +K ++ + E D++ L L +A
Sbjct: 846 ESEIAGLQKDEEKHLKRVNEIEEEEQHLKDRLSAQKSEIMKTQSEADELRKTLLTLNREA 905
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS 770
A L Q+ AIE S + +H +E K+++L+ L L S
Sbjct: 906 AKL--QKEAAAIE--------ASLEDKRLRRHNMLLE--CKVQDLKIRL-------LFGS 946
Query: 771 LHYEDCKKEVEHCRK---HLSDAK-----RQAESIAFITPELEKEFLEMPTTIEELEAAI 822
L D EVE RK D + + E+I L K+ ++ + +E+EA +
Sbjct: 947 L---DDISEVEGSRKLGTETEDTQTTGIYEREEAIKIDYSSLPKDLKDLESD-KEIEAHL 1002
Query: 823 ---QDNISQANSIFFL----NQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
Q I SI N +++ + + + ++ EA +KE + E + +K
Sbjct: 1003 NQMQQEIKSKESILMKTAVPNLRAVEKLQIARNKFQESMEAFEASRKEARISKQEFEEVK 1062
Query: 876 EK----WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDF-DKFGILIKVKFRQSG 930
++ + + I++ + + + + +S + E + + G ++
Sbjct: 1063 KRRYELFSQCFEHASIVIDQVYKKLCRNSSAQAFLSPENPEEPYLEGIGFNCVAPGKRFM 1122
Query: 931 QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
++ LS GGE++V+ + + ++ PF ++DEI+ +D N K+
Sbjct: 1123 PMDSLS-----GGEKTVAALALIFAVHSFRPAPFFILDEIDAALDNTNIDKV 1169
Score = 98 (39.6 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 49/207 (23%), Positives = 85/207 (41%)
Query: 41 PGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI-----GAYV-KRGEESGYIK 94
P R N +IGPNGSGKS+++ A++ L L R S+ GA+V K + +K
Sbjct: 23 PFMRFNCIIGPNGSGKSNIMDAVSFVLCEKISNL-RVKSVRELIHGAHVGKPVSSTASVK 81
Query: 95 ISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDR 154
I + EE T R I SE+ FN K + + + ++ I V + Q
Sbjct: 82 IVYCEEDGEEK-TFSRVIRD-GCSEYIFNDKSITRSAYISELEKIGILVKARNCLIFQGT 139
Query: 155 VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALN 214
V A P + + E+ Q ++ K K++ E N + + A
Sbjct: 140 VESIAMKKPKERTQLFEQISNSWQYAEEY---ERKKKKMQQAEEDAHFNYNKKKNIAAER 196
Query: 215 VEQEKDVERVRQRAELLEKVESMKKKL 241
+ + + E L+ ++ + + +L
Sbjct: 197 KQAKVEKEEAEHYQMLVRELNANRVQL 223
Score = 93 (37.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 64/280 (22%), Positives = 118/280 (42%)
Query: 644 MQTEQR-LIEDEAAKLQ-KEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKE-DDI 699
M+T Q LI+ +A ++ KE I V++ KR R+ E + + K+ ++ +E E D
Sbjct: 284 MKTLQASLIQQKALYIKAKENTSYQIKKVEMSKRSLRDKEKYCDKEKQNIKELEMELHDT 343
Query: 700 NTALAKLVDQAAD---LNIQQFKYA---IEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR 753
A + +A + L +++ + +E L EI K + + + + ++ K
Sbjct: 344 EKAWREFEKEAEEEILLRVERVELRERQLERYKELKEIARRKVATLTQQLGKLRWEQKAD 403
Query: 754 ELEFNLKQHEKLALQASL-----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF 808
E L Q +K ++ ++ E+ KK VE ++ K+ ES+ E +KE
Sbjct: 404 EERMKLYQRKKKEVKETIVQTVEQIEEYKKRVEKLEEY---TKKCTESLE---EEKKKEE 457
Query: 809 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE-LKRF 867
+ + IE I + + N I QN +Y +RQ + A+ E LKR
Sbjct: 458 M-LAKEIENSTTRIAEVNEELNKIVGELQNARIDYHEGKRQ------QMRAEIVESLKRL 510
Query: 868 LAE--IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGE 905
+ L + P + + + FS+ + VA E
Sbjct: 511 YPDSVFGRLLDLCHPIHKKYQLAVTKVFSKYMTAIVVATE 550
Score = 90 (36.7 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 49/199 (24%), Positives = 85/199 (42%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
QT + + E ++K+ + N+ + + E+ N + E + +
Sbjct: 709 QTRLKYSQSELDLIKKKH--LPNVYMEKSKLESELVNTESQHDMIKEGVVQRKLKIEEFQ 766
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 764
K +++A D Q+F I I+N+ V Y ++H+ E K R LEF Q +
Sbjct: 767 KQINEAEDAVFQEFCEEIGIENIRV--------YEQEHVRRQEEIDK-RRLEFE-NQKTR 816
Query: 765 LALQASLHYEDCKKEVEHCRKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQ 823
L++Q + E +K + K L D + ES IA + + EK L+ IEE E ++
Sbjct: 817 LSVQLEYNREHLQKLTDAVSK-LRDTIHKDESEIAGLQKDEEKH-LKRVNEIEEEEQHLK 874
Query: 824 DNISQANSIFFLNQNILQE 842
D +S S Q+ E
Sbjct: 875 DRLSAQKSEIMKTQSEADE 893
Score = 85 (35.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 64/279 (22%), Positives = 121/279 (43%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDDINTA 702
+R IE L ++ E +I+K E+ +K+ L + + E ++ T
Sbjct: 232 ERSIESLKESLDEKNME----ARIKKDSLSTAEDTFRAKKKVLGVLNRDQQQMEREMKTL 287
Query: 703 LAKLVDQAADLNI---QQFKYAIEIKNLLVEIVSCKWSYAEKHMASI-EFDAKIRELEFN 758
A L+ Q A L I + Y I+ + + K Y +K +I E + ++ + E
Sbjct: 288 QASLIQQKA-LYIKAKENTSYQIKKVEMSKRSLRDKEKYCDKEKQNIKELEMELHDTEKA 346
Query: 759 LKQHEKLALQASL----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT 814
++ EK A + L E ++++E K L + R+ +A +T +L K E
Sbjct: 347 WREFEKEAEEEILLRVERVELRERQLERY-KELKEIARR--KVATLTQQLGKLRWEQKAD 403
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK-QEADKKELKRFLAEIDA 873
E ++ Q + ++EY+ R ++E+ + K E+ ++E K+ E+ A
Sbjct: 404 EERMKL-YQRKKKEVKETIVQTVEQIEEYKKRVEKLEEYTKKCTESLEEEKKK--EEMLA 460
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHE 912
KE T R +A++NE ++ E+ A +D HE
Sbjct: 461 -KEIENSTTR--IAEVNEELNKIVGELQNA---RIDYHE 493
Score = 38 (18.4 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 395 KEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNS 430
K+++ + T ++C++ L++ + K L + NS
Sbjct: 432 KKRVEKLEEYT-KKCTESLEEEKKKEEMLAKEIENS 466
Score = 37 (18.1 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 383 VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME 417
V+ +++ L+ +KEK ++ K +++ L D E
Sbjct: 312 VEMSKRSLR--DKEKYCDKEKQNIKELEMELHDTE 344
>RGD|1310167 [details] [associations]
symbol:Eea1 "early endosome antigen 1" species:10116 "Rattus
norvegicus" [GO:0005545 "1-phosphatidylinositol binding"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
"endosome" evidence=ISO] [GO:0005769 "early endosome"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0005969
"serine-pyruvate aminotransferase complex" evidence=IEA;ISO]
[GO:0006897 "endocytosis" evidence=IEA;ISO] [GO:0006906 "vesicle
fusion" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
evidence=IEA;ISO] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0055037 "recycling endosome" evidence=IDA]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00064
SMART:SM00355 RGD:1310167 GO:GO:0005829 GO:GO:0046872 GO:GO:0005545
GO:GO:0008270 GO:GO:0006897 GO:GO:0019897 GO:GO:0055037
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0005769
GO:GO:0006906 OMA:LKEQCKT GO:GO:0005969
GeneTree:ENSGT00700000104373 IPI:IPI00768104 PRIDE:F1LUA1
Ensembl:ENSRNOT00000029764 ArrayExpress:F1LUA1 Uniprot:F1LUA1
Length = 1411
Score = 127 (49.8 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 74/310 (23%), Positives = 139/310 (44%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 710
++ + KE+ E+ +EK + + I L K E + ++ + + +Q
Sbjct: 901 LQQQTESALKEQSELKK--SLEKERETSQQLMIELNSVKGEVTQAQNTLKQKEKE--EQQ 956
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH---EKLAL 767
NI Q K A E K +E + + A +E +K+++ Q EK L
Sbjct: 957 LQGNINQLKQATEQKKKQMEALQGELKNVTSQKAQLE--SKLQQQAAQAAQELAVEKGKL 1014
Query: 768 QA-SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 826
A Y+ C+ +++ + L +++E +A T + ++ E+L A +D I
Sbjct: 1015 SALQSTYDKCQADLQQLQSDLYG--KESELLA--TRQ------DLKCVEEKLALAQEDLI 1064
Query: 827 SQANSIFFLNQNILQEYEHRQRQIE-DLSTKQEADKKELKRFL-AEID-ALKEKWLPTLR 883
S N I N++I QE + + +E DL+ K+E K++ K A+ + ++KEK L T +
Sbjct: 1065 SNRNQIGNQNKSI-QELQAAKAALEQDLAKKEEVLKEQSKALQDAQREKSVKEKELVTEK 1123
Query: 884 NLVAQINETFSRNFQEMAVAGEVSLDEHESDF--------DKFGILIKVKFRQSGQLEVL 935
+ +A++ E R +E+A E L H+ + D +LI+ K G+++ L
Sbjct: 1124 SKLAEMEEIKCRQEKEIAKLKE-ELKSHKQESIKEVTNLKDAKQLLIQQKLELQGKVDSL 1182
Query: 936 SAHHQSGGER 945
A + ER
Sbjct: 1183 KAALEQEKER 1192
Score = 120 (47.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 53/251 (21%), Positives = 108/251 (43%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMEN-HINLRKRKLESIEKEDDINTA 702
+Q QR + +L E+ ++ + +I+ R+ +E+ L+ K ESI++ ++ A
Sbjct: 1105 LQDAQREKSVKEKELVTEKSKLAEMEEIKCRQEKEIAKLKEELKSHKQESIKEVTNLKDA 1164
Query: 703 LAKLVDQAADLN--IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 760
L+ Q +L + K A+E + +++ + E+ EF K +L +K
Sbjct: 1165 KQLLIQQKLELQGKVDSLKAALEQEKERQQLMR-EQMRKEEEKRKEEFSEKEAKLHSEIK 1223
Query: 761 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
+ E + + +V ++L K++ +S ELEK+ ++ I LEA
Sbjct: 1224 EKEAGVKKHEENEAKLTMQVTTLNENLGTVKKEWQSSQRRVSELEKQTDDLRGEIAVLEA 1283
Query: 821 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 880
+Q+N + ++ E E Q ++ +L K + ++ E +L+ K
Sbjct: 1284 TVQNNQDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQELGRENQSLQIKHTQ 1343
Query: 881 TLRNLVAQINE 891
L A+ NE
Sbjct: 1344 ALNRKWAEDNE 1354
Score = 65 (27.9 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 45/211 (21%), Positives = 85/211 (40%)
Query: 100 DTKEEHLTIMRKIDTRNKSEWFFNGKVVP-KGEVLEITKRFNIQVNNLTQFLPQDRVCEF 158
D KE+HL++ +K + G++ + LE+ V +L Q E
Sbjct: 713 DYKEKHLSLEQKAED-------LEGQIKKLEANNLEVKASREQAVQSLQQQRQLSTDLEL 765
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
K L+E ++ V +L +Q+ KS L+ I+ T+ + + LK +
Sbjct: 766 RNAELRKQLQEQKEVVSHTKLDLQN-----KSEALENIKQTLTKKEEEKVVLKQEFEKLS 820
Query: 219 KDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFS 278
+D E Q EL +++++ +L + K A + EF
Sbjct: 821 QDSEA--QHKELSDRMQAAITEL-MVMTAQKDALLAELSTTKGKLSKVSDSLQTSRSEFE 877
Query: 279 KPIEGKKQEKAILDGD--CKKLSSLINENSK 307
K E +K + A+LD + CK+L + + ++
Sbjct: 878 K--ESQKGKAAVLDLEKACKELKHQLQQQTE 906
Score = 61 (26.5 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 56/278 (20%), Positives = 106/278 (38%)
Query: 167 LEETEKAVGDPQLPVQHC-ALVEKSSKLKTIECTVKRNGDTLNQLKA-------LNVEQE 218
LE+ + +GD +Q+ AL++KS + I K D +++A LN QE
Sbjct: 511 LEQVLRQIGDKDQKIQNLEALLQKSKE--NISLLEKEREDLYAKIQAGEGETAVLNQLQE 568
Query: 219 KDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFS 278
K+ +Q +L+EK+++ + + ++ + ++ E S
Sbjct: 569 KNHALQQQLTQLMEKLKNQSESHKQAEENLHD-QVQEQKAHLRAAQDRVLSLETSVSELS 627
Query: 279 KPIEGKKQEKAILDGDCKKLSSLI--NENSK--RRMDFLEKVDXXXXXXXXKYKXXXXXX 334
+ K++ + LD K + L+ E +K +R D +D K +
Sbjct: 628 SQLNESKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHLDTAQNALQDKQQELNKVS 687
Query: 335 XXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPH----DKIEKLGSQILELGVQANQKRL 390
K + + Y+ H K E L QI +L +AN +
Sbjct: 688 AQLDQVTA---KFQEKQEHCTQLESHLKDYKEKHLSLEQKAEDLEGQIKKL--EANNLEV 742
Query: 391 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
+ S ++ + Q+ RQ S D+E +N +L L+
Sbjct: 743 KASREQAV--QSLQQQRQLST---DLELRNAELRKQLQ 775
Score = 42 (19.8 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 383 VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED 418
++ K LQ +++EK + + +L + +L +ME+
Sbjct: 1098 LKEQSKALQDAQREKSVKEKELVTEK--SKLAEMEE 1131
Score = 41 (19.5 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 384 QANQKRLQKSEKEKILNQNKLTLRQCSD-RLKDMEDKNNKL 423
QA QK ++E+ L N L+Q ++ + K ME +L
Sbjct: 942 QAQNTLKQKEKEEQQLQGNINQLKQATEQKKKQMEALQGEL 982
>UNIPROTKB|F1RR74 [details] [associations]
symbol:LOC100515063 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005540 "hyaluronic acid binding" evidence=IEA]
InterPro:IPR026203 GO:GO:0005540 OMA:KPFQLQL PANTHER:PTHR18956
EMBL:CU694497 EMBL:CU571276 Ensembl:ENSSSCT00000018534
Uniprot:F1RR74
Length = 606
Score = 129 (50.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 70/314 (22%), Positives = 139/314 (44%)
Query: 650 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKR--KLESI-EKEDDINTALA-K 705
LI + + + EI N+ ++R E + H L+++ ++ES+ ++E ++++ L K
Sbjct: 288 LINRDRCRDENLNSEIQNL---KERSNLERQEHEELQQKVLQIESLLQQEKELSSNLQQK 344
Query: 706 LVDQAADLNIQQFKYAIEIKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
L ++ ++ + E+K L E+ + K AE + +E +A+ R E L + +
Sbjct: 345 LCSFQEEMIKERNLFEEELKQALDELDNLQQKEEQAETLVKQLEKEAESRAEELKLLEEK 404
Query: 764 KLALQASLHYEDC---------KKEVEHCRKHLSDAKRQAESIAFITP-ELEKEFLEMPT 813
+A L D ++ ++L D Q ES +T E+E LE
Sbjct: 405 LKGKEAELEKSDAAHTQATLLLQERYNSTVQNLGDVTAQFESYKTLTASEIEDLKLEN-A 463
Query: 814 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 873
+++E A + + +N QEY R + DL TK + E+K + +
Sbjct: 464 SLQEKVAKAEKSTEDVQHQILETENANQEYA---RMLLDLQTKSALKEAEIKEIT--VSS 518
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMA--VAGEVSLDEHESDFDKFGILIKVKFRQSG- 930
LK+ + L+N + Q E F + +E + E S+ E + +K+ +L + + ++
Sbjct: 519 LKK--ITDLQNQLKQQGEDFKKQLEEETRKIEKENSMAELTEEMNKWRLLYEELYNKTKP 576
Query: 931 ---QLEVLSAHHQS 941
QL+ A Q+
Sbjct: 577 FQLQLDAFEAEKQA 590
Score = 54 (24.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 29/156 (18%), Positives = 71/156 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVP-KGEVLEITKRF---NIQVNNLTQFLPQDRVCE 157
K+E + + ++ +N E GK+ +G+++ I K + L +++ ++ C
Sbjct: 172 KQEGMEVKLQVTQKNLEE--SQGKIAQLEGKLVSIEKEKMDEKSETEKLLEYI-EEISCA 228
Query: 158 FAKLSPVKL----LEETEKAVGDPQLPV-----QHCALVEKSSKLKTIECTV--KRNGDT 206
++ KL LEE K L + ++ A++ K +C K GD
Sbjct: 229 SDQVEKYKLDIAHLEENLKEKNHEILSLKQSIEENVAMLSKQVDDLNAKCQQLEKEKGDL 288
Query: 207 LNQLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL 241
+N+ + + +++ +++R+ L ++ E +++K+
Sbjct: 289 INRDRCRDENLNSEIQNLKERSNLERQEHEELQQKV 324
>UNIPROTKB|F1NX72 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00580000081569 EMBL:AADN02006734
IPI:IPI00577909 Ensembl:ENSGALT00000023006 Uniprot:F1NX72
Length = 1234
Score = 102 (41.0 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 61/337 (18%), Positives = 136/337 (40%)
Query: 652 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQA 710
E E A LQK+ E+ + V + + + +++ ++ +K ++ + E D++ L L +A
Sbjct: 846 ESEIAGLQKDEEKHLKRVNEIEEEEQHLKDRLSAQKSEIMKTQSEADELRKTLLTLNREA 905
Query: 711 ADLNIQQ--FKYAIEIKNLLVE--IVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 766
A L + + ++E K L ++ CK + + D I E+E + +
Sbjct: 906 AKLQKEAAAIEASLEDKRLRRHNMLLECKVQDLKIRLLFGSLD-DISEVELGTETEDTQT 964
Query: 767 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 826
E K + K L D + E A + ++++E + + ++ A+ N+
Sbjct: 965 TGIYEREEAIKIDYSSLPKDLKDLESDKEIEAHLN-QMQQEIKSKESIL--MKTAVP-NL 1020
Query: 827 SQANSIFFLNQNILQEYEHRQRQIEDLS-TKQEADKKELKRFLAEIDALKEKWLPTLRNL 885
+ + E + ++ +KQE ++ + +R+ L + +
Sbjct: 1021 RAVEKLQIARNKFQESMEAFEASRKEARISKQEFEEVKKRRY-----ELFSQCFEHASIV 1075
Query: 886 VAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGER 945
+ Q+ + RN A + +E + F + K + SGGE+
Sbjct: 1076 IDQVYKKLCRNSSAQAFLSPENPEEPYLEGIGFNCVAPGK-------RFMPMDSLSGGEK 1128
Query: 946 SVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 982
+V+ + + ++ PF ++DEI+ +D N K+
Sbjct: 1129 TVAALALIFAVHSFRPAPFFILDEIDAALDNTNIDKV 1165
Score = 98 (39.6 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 49/207 (23%), Positives = 85/207 (41%)
Query: 41 PGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI-----GAYV-KRGEESGYIK 94
P R N +IGPNGSGKS+++ A++ L L R S+ GA+V K + +K
Sbjct: 23 PFMRFNCIIGPNGSGKSNIMDAVSFVLCEKISNL-RVKSVRELIHGAHVGKPVSSTASVK 81
Query: 95 ISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDR 154
I + EE T R I SE+ FN K + + + ++ I V + Q
Sbjct: 82 IVYCEEDGEEK-TFSRVIRD-GCSEYIFNDKSITRSAYISELEKIGILVKARNCLIFQGT 139
Query: 155 VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALN 214
V A P + + E+ Q ++ K K++ E N + + A
Sbjct: 140 VESIAMKKPKERTQLFEQISNSWQYAEEY---ERKKKKMQQAEEDAHFNYNKKKNIAAER 196
Query: 215 VEQEKDVERVRQRAELLEKVESMKKKL 241
+ + + E L+ ++ + + +L
Sbjct: 197 KQAKVEKEEAEHYQMLVRELNANRVQL 223
Score = 93 (37.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 64/280 (22%), Positives = 118/280 (42%)
Query: 644 MQTEQR-LIEDEAAKLQ-KEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKE-DDI 699
M+T Q LI+ +A ++ KE I V++ KR R+ E + + K+ ++ +E E D
Sbjct: 284 MKTLQASLIQQKALYIKAKENTSYQIKKVEMSKRSLRDKEKYCDKEKQNIKELEMELHDT 343
Query: 700 NTALAKLVDQAAD---LNIQQFKYA---IEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR 753
A + +A + L +++ + +E L EI K + + + + ++ K
Sbjct: 344 EKAWREFEKEAEEEILLRVERVELRERQLERYKELKEIARRKVATLTQQLGKLRWEQKAD 403
Query: 754 ELEFNLKQHEKLALQASL-----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF 808
E L Q +K ++ ++ E+ KK VE ++ K+ ES+ E +KE
Sbjct: 404 EERMKLYQRKKKEVKETIVQTVEQIEEYKKRVEKLEEY---TKKCTESLE---EEKKKEE 457
Query: 809 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE-LKRF 867
+ + IE I + + N I QN +Y +RQ + A+ E LKR
Sbjct: 458 M-LAKEIENSTTRIAEVNEELNKIVGELQNARIDYHEGKRQ------QMRAEIVESLKRL 510
Query: 868 LAE--IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGE 905
+ L + P + + + FS+ + VA E
Sbjct: 511 YPDSVFGRLLDLCHPIHKKYQLAVTKVFSKYMTAIVVATE 550
Score = 90 (36.7 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 49/199 (24%), Positives = 85/199 (42%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
QT + + E ++K+ + N+ + + E+ N + E + +
Sbjct: 709 QTRLKYSQSELDLIKKKH--LPNVYMEKSKLESELVNTESQHDMIKEGVVQRKLKIEEFQ 766
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 764
K +++A D Q+F I I+N+ V Y ++H+ E K R LEF Q +
Sbjct: 767 KQINEAEDAVFQEFCEEIGIENIRV--------YEQEHVRRQEEIDK-RRLEFE-NQKTR 816
Query: 765 LALQASLHYEDCKKEVEHCRKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQ 823
L++Q + E +K + K L D + ES IA + + EK L+ IEE E ++
Sbjct: 817 LSVQLEYNREHLQKLTDAVSK-LRDTIHKDESEIAGLQKDEEKH-LKRVNEIEEEEQHLK 874
Query: 824 DNISQANSIFFLNQNILQE 842
D +S S Q+ E
Sbjct: 875 DRLSAQKSEIMKTQSEADE 893
Score = 85 (35.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 64/279 (22%), Positives = 121/279 (43%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDDINTA 702
+R IE L ++ E +I+K E+ +K+ L + + E ++ T
Sbjct: 232 ERSIESLKESLDEKNME----ARIKKDSLSTAEDTFRAKKKVLGVLNRDQQQMEREMKTL 287
Query: 703 LAKLVDQAADLNI---QQFKYAIEIKNLLVEIVSCKWSYAEKHMASI-EFDAKIRELEFN 758
A L+ Q A L I + Y I+ + + K Y +K +I E + ++ + E
Sbjct: 288 QASLIQQKA-LYIKAKENTSYQIKKVEMSKRSLRDKEKYCDKEKQNIKELEMELHDTEKA 346
Query: 759 LKQHEKLALQASL----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT 814
++ EK A + L E ++++E K L + R+ +A +T +L K E
Sbjct: 347 WREFEKEAEEEILLRVERVELRERQLERY-KELKEIARR--KVATLTQQLGKLRWEQKAD 403
Query: 815 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK-QEADKKELKRFLAEIDA 873
E ++ Q + ++EY+ R ++E+ + K E+ ++E K+ E+ A
Sbjct: 404 EERMKL-YQRKKKEVKETIVQTVEQIEEYKKRVEKLEEYTKKCTESLEEEKKK--EEMLA 460
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHE 912
KE T R +A++NE ++ E+ A +D HE
Sbjct: 461 -KEIENSTTR--IAEVNEELNKIVGELQNA---RIDYHE 493
Score = 38 (18.4 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 395 KEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNS 430
K+++ + T ++C++ L++ + K L + NS
Sbjct: 432 KKRVEKLEEYT-KKCTESLEEEKKKEEMLAKEIENS 466
Score = 37 (18.1 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 383 VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME 417
V+ +++ L+ +KEK ++ K +++ L D E
Sbjct: 312 VEMSKRSLR--DKEKYCDKEKQNIKELEMELHDTE 344
>UNIPROTKB|K7GMY0 [details] [associations]
symbol:LOC100515063 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005540 "hyaluronic acid binding" evidence=IEA]
InterPro:IPR026203 PANTHER:PTHR18956 GeneTree:ENSGT00390000007135
EMBL:CU694497 EMBL:CU571276 Ensembl:ENSSSCT00000034673
Uniprot:K7GMY0
Length = 626
Score = 129 (50.5 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 70/314 (22%), Positives = 139/314 (44%)
Query: 650 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKR--KLESI-EKEDDINTALA-K 705
LI + + + EI N+ ++R E + H L+++ ++ES+ ++E ++++ L K
Sbjct: 217 LINRDRCRDENLNSEIQNL---KERSNLERQEHEELQQKVLQIESLLQQEKELSSNLQQK 273
Query: 706 LVDQAADLNIQQFKYAIEIKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
L ++ ++ + E+K L E+ + K AE + +E +A+ R E L + +
Sbjct: 274 LCSFQEEMIKERNLFEEELKQALDELDNLQQKEEQAETLVKQLEKEAESRAEELKLLEEK 333
Query: 764 KLALQASLHYEDC---------KKEVEHCRKHLSDAKRQAESIAFITP-ELEKEFLEMPT 813
+A L D ++ ++L D Q ES +T E+E LE
Sbjct: 334 LKGKEAELEKSDAAHTQATLLLQERYNSTVQNLGDVTAQFESYKTLTASEIEDLKLEN-A 392
Query: 814 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 873
+++E A + + +N QEY R + DL TK + E+K + +
Sbjct: 393 SLQEKVAKAEKSTEDVQHQILETENANQEYA---RMLLDLQTKSALKEAEIKEIT--VSS 447
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMA--VAGEVSLDEHESDFDKFGILIKVKFRQSG- 930
LK+ + L+N + Q E F + +E + E S+ E + +K+ +L + + ++
Sbjct: 448 LKK--ITDLQNQLKQQGEDFKKQLEEETRKIEKENSMAELTEEMNKWRLLYEELYNKTKP 505
Query: 931 ---QLEVLSAHHQS 941
QL+ A Q+
Sbjct: 506 FQLQLDAFEAEKQA 519
Score = 54 (24.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 29/156 (18%), Positives = 71/156 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVP-KGEVLEITKRF---NIQVNNLTQFLPQDRVCE 157
K+E + + ++ +N E GK+ +G+++ I K + L +++ ++ C
Sbjct: 101 KQEGMEVKLQVTQKNLEE--SQGKIAQLEGKLVSIEKEKMDEKSETEKLLEYI-EEISCA 157
Query: 158 FAKLSPVKL----LEETEKAVGDPQLPV-----QHCALVEKSSKLKTIECTV--KRNGDT 206
++ KL LEE K L + ++ A++ K +C K GD
Sbjct: 158 SDQVEKYKLDIAHLEENLKEKNHEILSLKQSIEENVAMLSKQVDDLNAKCQQLEKEKGDL 217
Query: 207 LNQLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL 241
+N+ + + +++ +++R+ L ++ E +++K+
Sbjct: 218 INRDRCRDENLNSEIQNLKERSNLERQEHEELQQKV 253
>UNIPROTKB|H0YJ97 [details] [associations]
symbol:TRIP11 "Thyroid receptor-interacting protein 11"
species:9606 "Homo sapiens" [GO:0000042 "protein targeting to
Golgi" evidence=IEA] InterPro:IPR000237 PROSITE:PS50913
EMBL:AL049872 GO:GO:0000042 HGNC:HGNC:12305 PRIDE:H0YJ97
Ensembl:ENST00000554357 Bgee:H0YJ97 Uniprot:H0YJ97
Length = 1695
Score = 126 (49.4 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 50/259 (19%), Positives = 122/259 (47%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDINTALAKLVD- 708
++++ Q+ER++++ ++ ++ + ++N + LR ++ S ++ + + L + D
Sbjct: 1251 MQEKTVVFQQERDQVMLALKQKQMENTALQNEVQRLRDKEFRSNQELERLRNHLLESEDS 1310
Query: 709 ---QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE-KHMASIEFDAKIRELEFNLKQHEK 764
+A ++ K ++ L ++VS + H AS++ ++ +L KQ ++
Sbjct: 1311 YTREALAAEDREAKLRKKVTVLEEKLVSSSNAMENASHQASVQVESLQEQLNVVSKQRDE 1370
Query: 765 LALQASLHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEKE---FLEMPTTIEELEA 820
ALQ S+ E K+ + + Q E A + ELEK+ E E LE
Sbjct: 1371 TALQLSVSQEQVKQYALSLANLQMVLEHFQQEEKAMYSAELEKQKQLIAEWKKNAENLEG 1430
Query: 821 ---AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
++Q+ + +AN+ + ++ + ++ QIE+L + E ++E+ +D +++K
Sbjct: 1431 KVISLQECLDEANAALDSASRLTEQLDVKEEQIEELKRQNEL-RQEM------LDDVQKK 1483
Query: 878 WLPTLRNLVAQINETFSRN 896
+ + ++++ RN
Sbjct: 1484 LMSLANSSEGKVDKVLMRN 1502
Score = 67 (28.6 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 39/171 (22%), Positives = 79/171 (46%)
Query: 99 GDTKEEHLTIMRKIDTRNKSEWFFNGKVV-PK--GEVLEITKRFNIQVNNLTQFLPQD-- 153
G KEE+ + +++ R + E V PK V E+ + Q+N + + L ++
Sbjct: 572 GSMKEENNHLQEELE-RLREEQSRTAPVADPKTLDSVTELASEVS-QLNTIKEHLEEEIK 629
Query: 154 ---RVCEFAKLSPVKLLE---ETEKAVGD-----PQLPVQHCAL-VEKSSKLKTIECTVK 201
++ E S ++LL+ E +K + + Q+ H L +EK ++K+++ T++
Sbjct: 630 HHQKIIEDQNQSKMQLLQSLQEQKKEMDEFRYQHEQMNATHTQLFLEKDEEIKSLQKTIE 689
Query: 202 RNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
Q+K E+ +D++ KV+S+ + K+D+ KAE
Sbjct: 690 -------QIKTQLHEERQDIQTDNSDIFQETKVQSLNIENGSEKHDLSKAE 733
Score = 66 (28.3 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 25/110 (22%), Positives = 57/110 (51%)
Query: 142 QVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q+++ + PQ C A S V L E+ + + +L +L EK + ++T++
Sbjct: 1031 QLSSASLLTPQSAECLRASKSEV--LSESSELL-QQELEELRKSLQEKDATIRTLQENNH 1087
Query: 202 RNGDTL---NQLKALNVEQ-EKDVERVRQRAELLEKVESMKKKLPWLKYD 247
R D++ ++L+ EQ + ++++++++ ++L+K+ K L K D
Sbjct: 1088 RLSDSIAATSELERKEHEQTDSEIKQLKEKQDVLQKLLKEKDLLIKAKSD 1137
Score = 56 (24.8 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 32/132 (24%), Positives = 68/132 (51%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAY 439
EL VQ +K +Q E LN LT ++ D+++++ D+ NK + + EN+ E
Sbjct: 272 ELDVQ-KEKLIQS---EVALNDLHLTKQKLEDKVENLVDQLNKSQESNVSIQKENL-ELK 326
Query: 440 CWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWK-SFITQDAGDRDFLAKN 498
++Q+ EL++ L++ +++ +++N+ + + + + Q+ + + L +N
Sbjct: 327 EHIRQNEEELSR--IRNELMQ-SLNQDSNSNFKDTLLKEREAEVRNLKQNLSELEQLNEN 383
Query: 499 LKP--FDVPILN 508
LK FDV + N
Sbjct: 384 LKKVAFDVKMEN 395
Score = 48 (22.0 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 41/153 (26%), Positives = 65/153 (42%)
Query: 361 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN 420
+ +YE K++ G ++ + VQ + +L + K+ +L KL + S +L
Sbjct: 987 IQSYEQNETKLKNFGQELAQ--VQHSIGQLCNT-KDLLLG--KLDI--ISPQLSSASLLT 1039
Query: 421 NKLLHALRNSGAENIFEAYCWLQQHRHELNK-----EAYGPVLLEVN--VSNRAHANYLE 473
+ LR S +E + E+ LQQ EL K +A L E N +S+ A
Sbjct: 1040 PQSAECLRASKSEVLSESSELLQQELEELRKSLQEKDATIRTLQENNHRLSDSIAATSEL 1099
Query: 474 DHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ H S I Q +D L K LK D+ I
Sbjct: 1100 ERKEHEQTDSEIKQLKEKQDVLQKLLKEKDLLI 1132
Score = 48 (22.0 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 211 KALNVEQEKDVERVRQRAELLEKVESMKKKL 241
K + V Q + VE ++ +L +K++ + KKL
Sbjct: 37 KTIQVLQIEKVESTKKMEQLEDKIKDINKKL 67
>MGI|MGI:104667 [details] [associations]
symbol:Hmmr "hyaluronan mediated motility receptor (RHAMM)"
species:10090 "Mus musculus" [GO:0005540 "hyaluronic acid binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR026203 MGI:MGI:104667 GO:GO:0005737 GO:GO:0009986
GO:GO:0005540 EMBL:CH466609 CTD:3161 eggNOG:NOG146600
HOVERGEN:HBG044411 KO:K06267 PANTHER:PTHR18956 EMBL:AF031932
EMBL:AF079222 EMBL:AL646055 EMBL:AJ005919 EMBL:AJ005920
EMBL:AJ005921 EMBL:AJ005922 EMBL:AJ005923 EMBL:AJ005924 EMBL:X64550
IPI:IPI00120107 IPI:IPI00466219 PIR:JC4298 RefSeq:NP_038580.2
UniGene:Mm.116997 ProteinModelPortal:Q00547 DIP:DIP-46343N
STRING:Q00547 PhosphoSite:Q00547 PaxDb:Q00547 PRIDE:Q00547
Ensembl:ENSMUST00000020579 GeneID:15366 KEGG:mmu:15366
GeneTree:ENSGT00390000007135 HOGENOM:HOG000112920 OMA:QEKYNDT
OrthoDB:EOG4QFWD9 ChiTaRS:HMMR NextBio:287994 Bgee:Q00547
CleanEx:MM_HMMR Genevestigator:Q00547 GermOnline:ENSMUSG00000020330
Uniprot:Q00547
Length = 794
Score = 131 (51.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 65/309 (21%), Positives = 137/309 (44%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 704
+ +RL++ + + E++ + + + K E+E HI + + + ++ N
Sbjct: 393 EQSERLVKQLEEETKSTAEQLTRLDNLLREKEVELEKHIAAHAQAI--LIAQEKYNDTAQ 450
Query: 705 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 764
L D A L Q KY ++L ++ + S EK+ + + +R++ L+ ++
Sbjct: 451 SLRDVTAQLESVQEKYNDTAQSLR-DVTAQLESEQEKYNDTAQ---SLRDVTAQLESEQE 506
Query: 765 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA---A 821
+ D ++E ++ +D A+S+ +T +LE IE+L+
Sbjct: 507 KYNDTAQSLRDVTAQLESVQEKYNDT---AQSLRDVTAQLESYKSSTLKEIEDLKLENLT 563
Query: 822 IQDNISQAN-SIFFLNQNIL------QEYEHRQRQIEDLSTKQEADKKEL-KRFLAEIDA 873
+Q+ ++ A S+ + Q IL QEY + +++ ST +E + KE+ FL +I
Sbjct: 564 LQEKVAMAEKSVEDVQQQILTAESTNQEYARMVQDLQNRSTLKEEEIKEITSSFLEKITD 623
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQL 932
LK + + Q+ E R ++ V E++++ ++ + K K F+Q QL
Sbjct: 624 LKNQLRQQDEDFRKQLEEKGKRTAEKENVMTELTMEINKWRLLYEELYEKTKPFQQ--QL 681
Query: 933 EVLSAHHQS 941
+ A Q+
Sbjct: 682 DAFEAEKQA 690
Score = 54 (24.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 29/135 (21%), Positives = 69/135 (51%)
Query: 129 KGEVLEIT-KRFNIQVNNLTQFLPQDRVCEFAK-LSPVKLLEETEKAVGD-PQLPVQHCA 185
KG+++++ K +I+ + + +++ E+ + +S ++ EK D QL
Sbjct: 207 KGKIVQLEGKLVSIEKEKIDEKCETEKLLEYIQEISCAS--DQVEKCKVDIAQLEED--- 261
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNV-----EQEKD--VERVRQRAELLE-KVESM 237
L EK ++ +++ +++ N Q++ L V E E+D V + R+RAE L +++ +
Sbjct: 262 LKEKDREILSLKQSLEENITFSKQIEDLTVKCQLLETERDNLVSKDRERAETLSAEMQIL 321
Query: 238 KKKLPWLKYDMKKAE 252
++L + + +K +
Sbjct: 322 TERLALERQEYEKLQ 336
Score = 50 (22.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 39/165 (23%), Positives = 77/165 (46%)
Query: 95 ISLRGDTKEEHLTIMRKI-DTRNKSEWFFNGK--VVPKGEVLEITKRFNIQVNNLTQFLP 151
+SL+ + EE++T ++I D K + + +V K E + + ++ LT+ L
Sbjct: 270 LSLK-QSLEENITFSKQIEDLTVKCQLLETERDNLVSKDR--ERAETLSAEMQILTERLA 326
Query: 152 QDRVCEFAKLSPVKL----LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL 207
+R E+ KL +L L + EK + +L Q C+ E+ + K + K +
Sbjct: 327 LERQ-EYEKLQQKELQSQSLLQQEKELS-ARLQQQLCSFQEEMTSEKNV---FKE--ELK 379
Query: 208 NQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
L L+ Q+K+ + R +L E+ +S ++L L +++ E
Sbjct: 380 LALAELDAVQQKEEQSERLVKQLEEETKSTAEQLTRLDNLLREKE 424
Score = 43 (20.2 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 379 LELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 428
+EL +QA QK L +S+ + + + KL + +++ D + + KLL ++
Sbjct: 192 MELKLQATQKDLTESKGKIVQLEGKLVSIE-KEKI-DEKCETEKLLEYIQ 239
Score = 42 (19.8 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 152 QDRVCEFAK-LSPVKLLEETEKAVGDPQLP-VQHCALVEKSSKL-KTIECTVKRNGDTLN 208
Q ++C F + ++ K + + E + +L VQ E+S +L K +E K + L
Sbjct: 357 QQQLCSFQEEMTSEKNVFKEELKLALAELDAVQQKE--EQSERLVKQLEEETKSTAEQLT 414
Query: 209 QLKALNVEQEKDVE 222
+L N+ +EK+VE
Sbjct: 415 RLD--NLLREKEVE 426
>MGI|MGI:2442192 [details] [associations]
symbol:Eea1 "early endosome antigen 1" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005545
"1-phosphatidylinositol binding" evidence=ISO] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005769 "early endosome"
evidence=ISO;ISA;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005969 "serine-pyruvate aminotransferase complex"
evidence=IDA] [GO:0006897 "endocytosis" evidence=ISO] [GO:0006906
"vesicle fusion" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019897
"extrinsic to plasma membrane" evidence=ISO] [GO:0030742
"GTP-dependent protein binding" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055037 "recycling endosome"
evidence=ISO] InterPro:IPR000306 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00064 SMART:SM00355 MGI:MGI:2442192 GO:GO:0005829
GO:GO:0031901 GO:GO:0046872 GO:GO:0005545 GO:GO:0008270
GO:GO:0006897 GO:GO:0019897 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 eggNOG:NOG12793 GO:GO:0005769 GO:GO:0006906
CTD:8411 HOGENOM:HOG000112329 HOVERGEN:HBG039440 KO:K12478
OMA:LKEQCKT OrthoDB:EOG4MSCXG GO:GO:0005969 EMBL:BC075637
EMBL:AK046231 IPI:IPI00453776 RefSeq:NP_001001932.1
UniGene:Mm.210035 UniGene:Mm.490373 ProteinModelPortal:Q8BL66
SMR:Q8BL66 IntAct:Q8BL66 STRING:Q8BL66 PhosphoSite:Q8BL66
REPRODUCTION-2DPAGE:IPI00453776 PaxDb:Q8BL66 PRIDE:Q8BL66
Ensembl:ENSMUST00000053484 GeneID:216238 KEGG:mmu:216238
UCSC:uc007gwu.1 GeneTree:ENSGT00700000104373 InParanoid:Q8BL66
NextBio:375093 Bgee:Q8BL66 CleanEx:MM_EEA1 Genevestigator:Q8BL66
GermOnline:ENSMUSG00000036499 Uniprot:Q8BL66
Length = 1411
Score = 116 (45.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 57/259 (22%), Positives = 122/259 (47%)
Query: 644 MQTEQRLIED-EAAKLQKERE---EIINIVQIEKRK-RREME-NHIN--LRKRKLESIEK 695
++ + + +ED + K KE+E E + ++E+ K R+E E +N L+ K ESI++
Sbjct: 1098 LKEQSKALEDAQREKSVKEKELVAEKSKLAEMEEIKCRQEKEITKLNEELKSHKQESIKE 1157
Query: 696 EDDINTALAKLVDQAADLN--IQQFKYAIE----IKNLLVEIVSCKWSYAEKHMASIE-- 747
++ A L+ Q +L + K A+E + L+ E V + ++ + E
Sbjct: 1158 ITNLKDAKQLLIQQKLELQGRVDSLKAALEQEKESQQLMREQVKKEEEKRKEEFSEKEAK 1217
Query: 748 FDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE 807
++I+E E +K+HE+ + ++ +V ++L K++ +S ELEK+
Sbjct: 1218 LHSEIKEKEAGMKKHEENEAKLTM-------QVTTLNENLGTVKKEWQSSQRRVSELEKQ 1270
Query: 808 FLEMPTTIEELEAAIQDNISQANSIF---FLNQNILQEYEHR----QRQIEDLSTK-QEA 859
++ I LEA +Q+N + ++ + +++ + + QR++++ + QE
Sbjct: 1271 TDDLRGEIAVLEATVQNNQDERRALLERCLKGEGEIEKLQTKALELQRKLDNTTAAVQEL 1330
Query: 860 DKKELKRFLAEIDALKEKW 878
++ + AL KW
Sbjct: 1331 GRENQSLQIKHTQALNRKW 1349
Score = 75 (31.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 54/225 (24%), Positives = 99/225 (44%)
Query: 100 DTKEEHLTIMRKIDTRNKSEWFFNGKVVP-KGEVLEI--TKRFNIQVNNLTQFLPQDRVC 156
D KE+HL++ +K++ G + + + LE+ +K +Q + L D
Sbjct: 713 DHKEKHLSLEQKVED-------LEGHIKKLEADALEVKASKEQALQSLQQQRQLSTDLEL 765
Query: 157 EFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE 216
A+LS + L+E E+ V +L +Q+ KS L+ I+ T+ + + LK E
Sbjct: 766 RNAELS--RELQEQEEVVSCTKLDLQN-----KSEILENIKQTLTKKEEENVVLKQ---E 815
Query: 217 QEK-DVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLH 275
EK + Q EL +++++ +L +K K A N+
Sbjct: 816 FEKLSQDSKTQHKELGDRMQAAVTELTAVKAQ-KDALLAELSTTKEKLSKVSDSLKNSKS 874
Query: 276 EFSKPIEGKKQEKAILDGD--CKKLSSLIN---ENSKRRMDFLEK 315
EF K E +K + A+LD + CK+L + E++ + + L+K
Sbjct: 875 EFEK--ENQKGKAAVLDLEKACKELKHQLQVQAESALKEQEDLKK 917
Score = 58 (25.5 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E+S+ KT++ ++ + QL+A E ++R + EL EK E+ +K L+ +
Sbjct: 327 EESASRKTLQASLHQRDLDCQQLQARLTASESSLQRAQ--GELSEKAEAAQK----LREE 380
Query: 248 MKKAE 252
+++ E
Sbjct: 381 LREVE 385
Score = 53 (23.7 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 36/178 (20%), Positives = 71/178 (39%)
Query: 363 AYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK--N 420
A E HD++++ + + + SE LN++K + Q ++K + +
Sbjct: 594 AEENLHDQVQEQKAHLRAAQDRVLSLETSVSELSSQLNESKEKVSQLDIQIKAKTELLLS 653
Query: 421 NKLLHALRNSGAENIFE-AYCWLQQHRHELNKEAYGPVLLEVNVSNRA-HANYLEDHVGH 478
+ A + + +N + A LQ + ELNK + L + H LE H+
Sbjct: 654 AEAAKAAQRADLQNHLDTAQHALQDKQQELNKVSVQLDQLTAKFQEKQEHCIQLESHLKD 713
Query: 479 YIWKSF-ITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARL 535
+ K + Q D L ++K + L ++S+++ Q ++ R L L
Sbjct: 714 HKEKHLSLEQKVED---LEGHIKKLEADALEV---KASKEQALQSLQQQRQLSTDLEL 765
>UNIPROTKB|E1BUP9 [details] [associations]
symbol:CENPF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] InterPro:IPR019513
Pfam:PF10473 GeneTree:ENSGT00700000104127 InterPro:IPR018463
InterPro:IPR018302 Pfam:PF10481 Pfam:PF10490 EMBL:AADN02012085
EMBL:AADN02012086 IPI:IPI00820267 Ensembl:ENSGALT00000038507
ArrayExpress:E1BUP9 Uniprot:E1BUP9
Length = 2803
Score = 125 (49.1 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 58/240 (24%), Positives = 120/240 (50%)
Query: 652 EDEAAKLQK-EREEII--NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KL 706
ED A +++ ERE I N+++ K ++ + + L+S+EK D ++ L KL
Sbjct: 1992 EDSAKTIRRLEREVKIQTNLLETAKSDTDQLSGEKDHLLQNLQSLEK-DALSFRLEEEKL 2050
Query: 707 VDQAADLN-----IQQFKYAIEIKNLLVEIVSCKWS-YAEKHMASI-EFDAKIRELEFNL 759
+Q ADLN + + ++ K +EI + K S Y + + E A++ + +
Sbjct: 2051 QNQVADLNKEKEVLMRESEMMQSKLSALEIENSKLSRYLDGLITEKRELAARLNSAQKEV 2110
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
Q + + + E +++ H + L + +R+++++ LE+E LEM E LE
Sbjct: 2111 NQMREGMEKLKIKIESDERKKRHIAEKLKENERKSDALLDKVERLERE-LEMSE--ENLE 2167
Query: 820 -AAIQDNISQANSIFFLNQN--ILQEYEHRQRQIEDLSTKQEA---DKKELKRFLAEIDA 873
A +Q ++A + F+ + + ++ + Q QI+DL++++E D KE + + E+++
Sbjct: 2168 DAVVQLETAKAEAETFITEKEEMAEKLKCLQSQIDDLTSQKECLAKDSKEKQERILELES 2227
Score = 114 (45.2 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 67/269 (24%), Positives = 122/269 (45%)
Query: 661 EREEIINIVQIE-KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFK 719
+ E+ I+ +Q E +R+++ I L + E + + D++ +++ + L Q K
Sbjct: 2440 DAEQAISKLQEEFTMERKKLAEQIQLLQEHSE--QNKIDLHLVVSEKHELTKSLGAVQ-K 2496
Query: 720 YAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKE 779
E +N++ +S Y +K + E +E + LK+ + + + E C+++
Sbjct: 2497 ELQEKENIMKREIS---KYQDK-LLQTE-----KEHQNALKEANR---KNEIQIEACQEK 2544
Query: 780 VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI 839
V +S K + E + EL E T+ EL DNI N+I LN+
Sbjct: 2545 VNSLECFISSQKLEIEHLNSTKEELNNSLKEANQTLGELLKLKADNI---NTIVQLNKE- 2600
Query: 840 LQEYEHRQRQIEDLSTKQ-EADKKELKRFLAEIDAL-KEKWLPTLRNLVAQINETFSRNF 897
+E+ + Q+ S KQ E +K+ L++ LA+ + L K+K T N I E
Sbjct: 2601 -KEFVQSEVQLWIKSCKQMEQEKEVLQKQLADCEELLKKKDKGTDENA---ITEEIKLEL 2656
Query: 898 QEMAVAGEVSLDEHESDFDKFGILIKVKF 926
+E+ A EV E + +K+ LI VK+
Sbjct: 2657 EELQEAVEVKTREANENLEKYCSLI-VKY 2684
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 41/219 (18%), Positives = 93/219 (42%)
Query: 365 EPPHDKIEKLGSQILELGVQAN----QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN 420
E K E++ + L V+ N Q + Q+ E+++ +N + ++L + +
Sbjct: 1898 EQRQTKSEQVNMETHALFVEGNAEILQAKCQQLERDREINLQTIP-SSLQEQLVSVTAER 1956
Query: 421 NKL--LHALRNSGAENIFEAYCWLQQHRHEL--NKEAYGPVLLEVNVSNRAHANYLEDHV 476
N + ++ + + + + Y LQ+ EL NKE + + + N LE
Sbjct: 1957 NHIGQEQSVLSENKKELGQEYQKLQEKLKELETNKEDSAKTIRRLEREVKIQTNLLETA- 2015
Query: 477 GHYIWKSFITQDAGDRDFLAKNLKPFDVPILNY-VSNESSRKEPFQISEEMRALGISARL 535
KS Q +G++D L +NL+ + L++ + E + + +++E L + +
Sbjct: 2016 -----KSDTDQLSGEKDHLLQNLQSLEKDALSFRLEEEKLQNQVADLNKEKEVLMRESEM 2070
Query: 536 DQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK 574
Q + ++ +S++ LD +E + ++ K
Sbjct: 2071 MQSKLSALEIENSKLSRY-LDGLITEKRELAARLNSAQK 2108
Score = 62 (26.9 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 25/110 (22%), Positives = 45/110 (40%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSD-----RLKDMEDKNNKL-- 423
+ LG + ++ + N + S L+ +LT C D ++ + K+ ++
Sbjct: 1850 VVSLGKEPEKISAKHNVNKTVLSNTTDTLDDIELTKGNCHDLFLGAEIEQRQTKSEQVNM 1909
Query: 424 -LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYL 472
HAL G I +A C + E+N + L E VS A N++
Sbjct: 1910 ETHALFVEGNAEILQAKCQQLERDREINLQTIPSSLQEQLVSVTAERNHI 1959
Score = 61 (26.5 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 380 ELGVQANQKRLQKSEKEKILNQ--NKLT-----LRQCSDRLKDMEDKNNKLLHALRNSGA 432
E +Q ++ +L+ +EK+K+LN+ +KLT Q + +++ ME K +L L N
Sbjct: 308 ETELQLDRMKLELTEKDKVLNKTRDKLTQMKTQFDQATVQVQAMEQKMKRLSEEL-NCQR 366
Query: 433 ENIFEAYCWLQQHRHELNKE 452
+N A L+Q KE
Sbjct: 367 QNAESARQSLEQKIKAKEKE 386
Score = 60 (26.2 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
G +L+ K ++ + +++ P+ R+ E L ++ E+ K + + QL +Q E+
Sbjct: 1518 GHILDSVKE--LRSSTPSKYNPEGRIKELEMLC--QIYEKVIKVLQN-QLHIQENMKTEE 1572
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEK-DVERVRQRAELLEKVESMKKKLPWLKYDM 248
++K I + +R D L L Q+K + +L E E K L +D+
Sbjct: 1573 IQEMKNIMLSERREIDKLQNLSDKKEWQQKLNYLTTEMECKLAE--EGKTKNL---SFDL 1627
Query: 249 KKA 251
K A
Sbjct: 1628 KTA 1630
Score = 60 (26.2 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 32/156 (20%), Positives = 66/156 (42%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN 429
KI +L SQ+ +L + Q++ Q E L + K + + ++ +N L+
Sbjct: 19 KIHELESQVDKLKKERQQRQFQLESLEAALQKQKQKVENEKNETAILKRENQSLMEL--- 75
Query: 430 SGAENIFEAYCWLQQHRHELN-KEAYGPVLLEVNVSNRAHANYLEDHVGHY---IWKSFI 485
+++ +A Q++ H+L KE+ +L S++ LE + Y + +S
Sbjct: 76 --CDSLDKAK---QKNSHDLQVKESQVNILSGQLSSSKKEIERLEQELKRYKCELERSQQ 130
Query: 486 TQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQ 521
+ A + F K F P+ S+ ++ E +
Sbjct: 131 SLIAAELSFSGTPQKSFTAPLTPVQSHNDAKFEELE 166
Score = 51 (23.0 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 203 NGDTLNQLKALNVEQEKDVERVRQRAELLEK 233
N +NQL+A N E ++ + Q+ + LEK
Sbjct: 267 NSLLINQLRAQNQELNSTIKDLEQQLQALEK 297
>UNIPROTKB|E1C703 [details] [associations]
symbol:CENPF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000085 "G2 phase of mitotic cell cycle" evidence=IEA]
[GO:0000087 "M phase of mitotic cell cycle" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0000922 "spindle pole"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010389 "regulation of G2/M transition
of mitotic cell cycle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016202 "regulation of striated muscle
tissue development" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045120
"pronucleus" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0051310 "metaphase plate
congression" evidence=IEA] InterPro:IPR019513 Pfam:PF10473
GO:GO:0005737 GO:GO:0005635 GO:GO:0045892 GO:GO:0000776
GO:GO:0015031 GO:GO:0000085 GO:GO:0030496 GO:GO:0016363
GeneTree:ENSGT00700000104127 GO:GO:0000922 GO:GO:0010389
GO:GO:0045120 GO:GO:0000087 GO:GO:0051310 GO:GO:0016202
InterPro:IPR018463 InterPro:IPR018302 Pfam:PF10481 Pfam:PF10490
OMA:SRQQRSF EMBL:AADN02012085 EMBL:AADN02012086 IPI:IPI00593495
Ensembl:ENSGALT00000015897 ArrayExpress:E1C703 Uniprot:E1C703
Length = 2810
Score = 125 (49.1 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 58/240 (24%), Positives = 120/240 (50%)
Query: 652 EDEAAKLQK-EREEII--NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KL 706
ED A +++ ERE I N+++ K ++ + + L+S+EK D ++ L KL
Sbjct: 1999 EDSAKTIRRLEREVKIQTNLLETAKSDTDQLSGEKDHLLQNLQSLEK-DALSFRLEEEKL 2057
Query: 707 VDQAADLN-----IQQFKYAIEIKNLLVEIVSCKWS-YAEKHMASI-EFDAKIRELEFNL 759
+Q ADLN + + ++ K +EI + K S Y + + E A++ + +
Sbjct: 2058 QNQVADLNKEKEVLMRESEMMQSKLSALEIENSKLSRYLDGLITEKRELAARLNSAQKEV 2117
Query: 760 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 819
Q + + + E +++ H + L + +R+++++ LE+E LEM E LE
Sbjct: 2118 NQMREGMEKLKIKIESDERKKRHIAEKLKENERKSDALLDKVERLERE-LEMSE--ENLE 2174
Query: 820 -AAIQDNISQANSIFFLNQN--ILQEYEHRQRQIEDLSTKQEA---DKKELKRFLAEIDA 873
A +Q ++A + F+ + + ++ + Q QI+DL++++E D KE + + E+++
Sbjct: 2175 DAVVQLETAKAEAETFITEKEEMAEKLKCLQSQIDDLTSQKECLAKDSKEKQERILELES 2234
Score = 114 (45.2 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 67/269 (24%), Positives = 122/269 (45%)
Query: 661 EREEIINIVQIE-KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFK 719
+ E+ I+ +Q E +R+++ I L + E + + D++ +++ + L Q K
Sbjct: 2447 DAEQAISKLQEEFTMERKKLAEQIQLLQEHSE--QNKIDLHLVVSEKHELTKSLGAVQ-K 2503
Query: 720 YAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKE 779
E +N++ +S Y +K + E +E + LK+ + + + E C+++
Sbjct: 2504 ELQEKENIMKREIS---KYQDK-LLQTE-----KEHQNALKEANR---KNEIQIEACQEK 2551
Query: 780 VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI 839
V +S K + E + EL E T+ EL DNI N+I LN+
Sbjct: 2552 VNSLECFISSQKLEIEHLNSTKEELNNSLKEANQTLGELLKLKADNI---NTIVQLNKE- 2607
Query: 840 LQEYEHRQRQIEDLSTKQ-EADKKELKRFLAEIDAL-KEKWLPTLRNLVAQINETFSRNF 897
+E+ + Q+ S KQ E +K+ L++ LA+ + L K+K T N I E
Sbjct: 2608 -KEFVQSEVQLWIKSCKQMEQEKEVLQKQLADCEELLKKKDKGTDENA---ITEEIKLEL 2663
Query: 898 QEMAVAGEVSLDEHESDFDKFGILIKVKF 926
+E+ A EV E + +K+ LI VK+
Sbjct: 2664 EELQEAVEVKTREANENLEKYCSLI-VKY 2691
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 41/219 (18%), Positives = 93/219 (42%)
Query: 365 EPPHDKIEKLGSQILELGVQAN----QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN 420
E K E++ + L V+ N Q + Q+ E+++ +N + ++L + +
Sbjct: 1905 EQRQTKSEQVNMETHALFVEGNAEILQAKCQQLERDREINLQTIP-SSLQEQLVSVTAER 1963
Query: 421 NKL--LHALRNSGAENIFEAYCWLQQHRHEL--NKEAYGPVLLEVNVSNRAHANYLEDHV 476
N + ++ + + + + Y LQ+ EL NKE + + + N LE
Sbjct: 1964 NHIGQEQSVLSENKKELGQEYQKLQEKLKELETNKEDSAKTIRRLEREVKIQTNLLETA- 2022
Query: 477 GHYIWKSFITQDAGDRDFLAKNLKPFDVPILNY-VSNESSRKEPFQISEEMRALGISARL 535
KS Q +G++D L +NL+ + L++ + E + + +++E L + +
Sbjct: 2023 -----KSDTDQLSGEKDHLLQNLQSLEKDALSFRLEEEKLQNQVADLNKEKEVLMRESEM 2077
Query: 536 DQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK 574
Q + ++ +S++ LD +E + ++ K
Sbjct: 2078 MQSKLSALEIENSKLSRY-LDGLITEKRELAARLNSAQK 2115
Score = 62 (26.9 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 25/110 (22%), Positives = 45/110 (40%)
Query: 371 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSD-----RLKDMEDKNNKL-- 423
+ LG + ++ + N + S L+ +LT C D ++ + K+ ++
Sbjct: 1857 VVSLGKEPEKISAKHNVNKTVLSNTTDTLDDIELTKGNCHDLFLGAEIEQRQTKSEQVNM 1916
Query: 424 -LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYL 472
HAL G I +A C + E+N + L E VS A N++
Sbjct: 1917 ETHALFVEGNAEILQAKCQQLERDREINLQTIPSSLQEQLVSVTAERNHI 1966
Score = 61 (26.5 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 380 ELGVQANQKRLQKSEKEKILNQ--NKLT-----LRQCSDRLKDMEDKNNKLLHALRNSGA 432
E +Q ++ +L+ +EK+K+LN+ +KLT Q + +++ ME K +L L N
Sbjct: 308 ETELQLDRMKLELTEKDKVLNKTRDKLTQMKTQFDQATVQVQAMEQKMKRLSEEL-NCQR 366
Query: 433 ENIFEAYCWLQQHRHELNKE 452
+N A L+Q KE
Sbjct: 367 QNAESARQSLEQKIKAKEKE 386
Score = 60 (26.2 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
G +L+ K ++ + +++ P+ R+ E L ++ E+ K + + QL +Q E+
Sbjct: 1525 GHILDSVKE--LRSSTPSKYNPEGRIKELEMLC--QIYEKVIKVLQN-QLHIQENMKTEE 1579
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEK-DVERVRQRAELLEKVESMKKKLPWLKYDM 248
++K I + +R D L L Q+K + +L E E K L +D+
Sbjct: 1580 IQEMKNIMLSERREIDKLQNLSDKKEWQQKLNYLTTEMECKLAE--EGKTKNL---SFDL 1634
Query: 249 KKA 251
K A
Sbjct: 1635 KTA 1637
Score = 60 (26.2 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 32/156 (20%), Positives = 66/156 (42%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN 429
KI +L SQ+ +L + Q++ Q E L + K + + ++ +N L+
Sbjct: 19 KIHELESQVDKLKKERQQRQFQLESLEAALQKQKQKVENEKNETAILKRENQSLMEL--- 75
Query: 430 SGAENIFEAYCWLQQHRHELN-KEAYGPVLLEVNVSNRAHANYLEDHVGHY---IWKSFI 485
+++ +A Q++ H+L KE+ +L S++ LE + Y + +S
Sbjct: 76 --CDSLDKAK---QKNSHDLQVKESQVNILSGQLSSSKKEIERLEQELKRYKCELERSQQ 130
Query: 486 TQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQ 521
+ A + F K F P+ S+ ++ E +
Sbjct: 131 SLIAAELSFSGTPQKSFTAPLTPVQSHNDAKFEELE 166
Score = 51 (23.0 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 203 NGDTLNQLKALNVEQEKDVERVRQRAELLEK 233
N +NQL+A N E ++ + Q+ + LEK
Sbjct: 267 NSLLINQLRAQNQELNSTIKDLEQQLQALEK 297
>UNIPROTKB|I3LED2 [details] [associations]
symbol:LOC100515063 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005540 "hyaluronic acid binding" evidence=IEA]
InterPro:IPR026203 GO:GO:0005540 PANTHER:PTHR18956
GeneTree:ENSGT00390000007135 EMBL:CU694497 EMBL:CU571276
Ensembl:ENSSSCT00000030611 Uniprot:I3LED2
Length = 703
Score = 129 (50.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 70/314 (22%), Positives = 139/314 (44%)
Query: 650 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKR--KLESI-EKEDDINTALA-K 705
LI + + + EI N+ ++R E + H L+++ ++ES+ ++E ++++ L K
Sbjct: 283 LINRDRCRDENLNSEIQNL---KERSNLERQEHEELQQKVLQIESLLQQEKELSSNLQQK 339
Query: 706 LVDQAADLNIQQFKYAIEIKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
L ++ ++ + E+K L E+ + K AE + +E +A+ R E L + +
Sbjct: 340 LCSFQEEMIKERNLFEEELKQALDELDNLQQKEEQAETLVKQLEKEAESRAEELKLLEEK 399
Query: 764 KLALQASLHYEDC---------KKEVEHCRKHLSDAKRQAESIAFITP-ELEKEFLEMPT 813
+A L D ++ ++L D Q ES +T E+E LE
Sbjct: 400 LKGKEAELEKSDAAHTQATLLLQERYNSTVQNLGDVTAQFESYKTLTASEIEDLKLEN-A 458
Query: 814 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 873
+++E A + + +N QEY R + DL TK + E+K + +
Sbjct: 459 SLQEKVAKAEKSTEDVQHQILETENANQEYA---RMLLDLQTKSALKEAEIKEIT--VSS 513
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMA--VAGEVSLDEHESDFDKFGILIKVKFRQSG- 930
LK+ + L+N + Q E F + +E + E S+ E + +K+ +L + + ++
Sbjct: 514 LKK--ITDLQNQLKQQGEDFKKQLEEETRKIEKENSMAELTEEMNKWRLLYEELYNKTKP 571
Query: 931 ---QLEVLSAHHQS 941
QL+ A Q+
Sbjct: 572 FQLQLDAFEAEKQA 585
Score = 54 (24.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 29/156 (18%), Positives = 71/156 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVP-KGEVLEITKRF---NIQVNNLTQFLPQDRVCE 157
K+E + + ++ +N E GK+ +G+++ I K + L +++ ++ C
Sbjct: 167 KQEGMEVKLQVTQKNLEE--SQGKIAQLEGKLVSIEKEKMDEKSETEKLLEYI-EEISCA 223
Query: 158 FAKLSPVKL----LEETEKAVGDPQLPV-----QHCALVEKSSKLKTIECTV--KRNGDT 206
++ KL LEE K L + ++ A++ K +C K GD
Sbjct: 224 SDQVEKYKLDIAHLEENLKEKNHEILSLKQSIEENVAMLSKQVDDLNAKCQQLEKEKGDL 283
Query: 207 LNQLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL 241
+N+ + + +++ +++R+ L ++ E +++K+
Sbjct: 284 INRDRCRDENLNSEIQNLKERSNLERQEHEELQQKV 319
Score = 49 (22.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 368 HDK-IEKLGSQILELGVQ--ANQKRLQKSEKEKILNQNKLTLRQCSDRLKDM--EDKNNK 422
+DK ++ L +I L Q A KR+Q E L + + L + ++ LK ED N K
Sbjct: 82 NDKDLKTLEKEIRVLVQQRGAQDKRIQDLEGNASLEKQLIELTRTNELLKSKFSEDSNQK 141
Query: 423 LLHAL 427
+ L
Sbjct: 142 NMRIL 146
>UNIPROTKB|K7GSC4 [details] [associations]
symbol:LOC100515063 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005540 "hyaluronic acid binding" evidence=IEA]
InterPro:IPR026203 PANTHER:PTHR18956 GeneTree:ENSGT00390000007135
EMBL:CU694497 EMBL:CU571276 RefSeq:XP_003134130.2
Ensembl:ENSSSCT00000036191 GeneID:100515063 Uniprot:K7GSC4
Length = 713
Score = 129 (50.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 70/314 (22%), Positives = 139/314 (44%)
Query: 650 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKR--KLESI-EKEDDINTALA-K 705
LI + + + EI N+ ++R E + H L+++ ++ES+ ++E ++++ L K
Sbjct: 304 LINRDRCRDENLNSEIQNL---KERSNLERQEHEELQQKVLQIESLLQQEKELSSNLQQK 360
Query: 706 LVDQAADLNIQQFKYAIEIKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 763
L ++ ++ + E+K L E+ + K AE + +E +A+ R E L + +
Sbjct: 361 LCSFQEEMIKERNLFEEELKQALDELDNLQQKEEQAETLVKQLEKEAESRAEELKLLEEK 420
Query: 764 KLALQASLHYEDC---------KKEVEHCRKHLSDAKRQAESIAFITP-ELEKEFLEMPT 813
+A L D ++ ++L D Q ES +T E+E LE
Sbjct: 421 LKGKEAELEKSDAAHTQATLLLQERYNSTVQNLGDVTAQFESYKTLTASEIEDLKLEN-A 479
Query: 814 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 873
+++E A + + +N QEY R + DL TK + E+K + +
Sbjct: 480 SLQEKVAKAEKSTEDVQHQILETENANQEYA---RMLLDLQTKSALKEAEIKEIT--VSS 534
Query: 874 LKEKWLPTLRNLVAQINETFSRNFQEMA--VAGEVSLDEHESDFDKFGILIKVKFRQSG- 930
LK+ + L+N + Q E F + +E + E S+ E + +K+ +L + + ++
Sbjct: 535 LKK--ITDLQNQLKQQGEDFKKQLEEETRKIEKENSMAELTEEMNKWRLLYEELYNKTKP 592
Query: 931 ---QLEVLSAHHQS 941
QL+ A Q+
Sbjct: 593 FQLQLDAFEAEKQA 606
Score = 54 (24.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 29/156 (18%), Positives = 71/156 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVP-KGEVLEITKRF---NIQVNNLTQFLPQDRVCE 157
K+E + + ++ +N E GK+ +G+++ I K + L +++ ++ C
Sbjct: 188 KQEGMEVKLQVTQKNLEE--SQGKIAQLEGKLVSIEKEKMDEKSETEKLLEYI-EEISCA 244
Query: 158 FAKLSPVKL----LEETEKAVGDPQLPV-----QHCALVEKSSKLKTIECTV--KRNGDT 206
++ KL LEE K L + ++ A++ K +C K GD
Sbjct: 245 SDQVEKYKLDIAHLEENLKEKNHEILSLKQSIEENVAMLSKQVDDLNAKCQQLEKEKGDL 304
Query: 207 LNQLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL 241
+N+ + + +++ +++R+ L ++ E +++K+
Sbjct: 305 INRDRCRDENLNSEIQNLKERSNLERQEHEELQQKV 340
>UNIPROTKB|F1MN61 [details] [associations]
symbol:Bt.111284 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
evidence=IEA] [GO:0006906 "vesicle fusion" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005969
"serine-pyruvate aminotransferase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0005545 "1-phosphatidylinositol binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 GO:GO:0005829 GO:GO:0005545
GO:GO:0008270 GO:GO:0006897 GO:GO:0019897 GO:GO:0005769
GO:GO:0006906 GO:GO:0005969 GeneTree:ENSGT00700000104373
EMBL:DAAA02012765 EMBL:DAAA02012766 EMBL:DAAA02012767
IPI:IPI01002077 Ensembl:ENSBTAT00000047703 OMA:KQQXKLE
Uniprot:F1MN61
Length = 1188
Score = 124 (48.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 72/301 (23%), Positives = 141/301 (46%)
Query: 658 LQKEREEIINIVQIEKRKRREMENHI--NLRKRKLESIEKEDDINTALAKLVDQAADLNI 715
L+K +E+ + +Q++ + +N + +L K K S + + ++++ +++ QA D
Sbjct: 849 LEKTCKELKHQLQVQTESLHKEQNEMKKSLEKEKETSHQLKLELSSMQGQVI-QAQDSLK 907
Query: 716 QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-----ELEFNLKQHEKLALQAS 770
Q+ K ++++ + E+ +K + +++ + KI ELE L+Q A Q
Sbjct: 908 QKEKEEQQLQSNINELKQLT-EQKKKQIETLQGEVKIAVSQKTELENKLQQQSMQAAQ-E 965
Query: 771 LHYEDCKKEV-EHCRKHLSDAKRQAESIAF-ITPELEKEFLEMPTTIEELEAAIQDNISQ 828
L E K V ++ + + +Q +S + EL ++ + E+L A +D IS
Sbjct: 966 LAAEKQKISVLQNTYEKSQENLKQLQSDFYGKESELLATRQDLKSIEEKLSLAQEDLISN 1025
Query: 829 ANSIFFLNQN-ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID---ALKEKWLPTLRN 884
N I NQN ++QE + + +E K+E KE + L ++ +LKEK L ++
Sbjct: 1026 RNQIG--NQNKLIQELKTTKTTLEQDLAKKEQQLKEQNKALQDMQKEKSLKEKELVNEKS 1083
Query: 885 LVAQINETFSRNFQEMAVAGEVSLDEHESDF--------DKFGILIKVKFRQSGQLEVLS 936
+A+ E R +E+A E L H+ + D +LI+ K G+++ L
Sbjct: 1084 KLAETEEIKCRQEKEIAKLSE-ELKSHKQESIKEITNLKDAKQLLIQQKLELQGKVDSLK 1142
Query: 937 A 937
A
Sbjct: 1143 A 1143
Score = 64 (27.6 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 63/311 (20%), Positives = 125/311 (40%)
Query: 167 LEETEKAVGDPQLPVQHC-ALVEKSSKLKTIECTVKRNGDTLNQLKA-------LNVEQE 218
LE+ + +GD +Q+ AL++KS + I K D +++A LN QE
Sbjct: 470 LEQVLRQIGDKDQKIQNLEALLQKSKE--NISLLEKEREDLYAKIQAGEGETAVLNQLQE 527
Query: 219 KDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFS 278
K+ Q +L EK+++ + + ++ + ++++E +
Sbjct: 528 KNHTLQEQVTQLTEKLKNQSESHKQAQENLHD-QVQEQKAHLRAAQDRVLSLESSINELN 586
Query: 279 KPIEGKKQEKAILDGDCKKLSSLI--NENSK--RRMDFLEKVDXXXXXXXXKYKXXXXXX 334
+ K++ + LD K + L+ E +K +R D +D K +
Sbjct: 587 SQLNESKEKVSQLDIQVKAKTELLLSAEAAKTAQRADLQNHLDTAQNALQDKQQELNKIT 646
Query: 335 XXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPH----DKIEKLGSQI--LE---LGVQA 385
K + + Y+ H K E+L QI LE L V+A
Sbjct: 647 TQLDQVTT---KLQDKQEHCSQLESHLKEYKEKHLSLEQKTEELEGQIKKLEADMLEVKA 703
Query: 386 NQKR-LQKSEKEKILNQN-KLTLRQCSDRLK-DMEDKNNKLLHALRNSGA-ENIFEAYCW 441
++++ LQ ++++ LN + +L + S +L+ + E +N L + S A EN +
Sbjct: 704 SKEQALQGLQQQRQLNTDLELRATELSKQLEMEKETVSNTKLDLQKKSEALENTKQMLTK 763
Query: 442 LQQHRHELNKE 452
++ + L +E
Sbjct: 764 QEEEKTMLKQE 774
Score = 59 (25.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 36/169 (21%), Positives = 69/169 (40%)
Query: 369 DKIEKLGSQILELGVQANQKRLQKSEKE-KILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 427
D++ L S I EL Q N+ + + S+ + ++ + +L L + + D N L
Sbjct: 573 DRVLSLESSINELNSQLNESKEKVSQLDIQVKAKTELLLSAEAAKTAQRADLQNHL---- 628
Query: 428 RNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRA-HANYLEDHVGHYIWKSFIT 486
A+N LQ + ELNK + + ++ H + LE H+ Y K
Sbjct: 629 --DTAQNA------LQDKQQELNKITTQLDQVTTKLQDKQEHCSQLESHLKEYKEKHLSL 680
Query: 487 QDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARL 535
+ + L +K + +L ++S+++ Q ++ R L L
Sbjct: 681 EQKTEE--LEGQIKKLEADMLEV---KASKEQALQGLQQQRQLNTDLEL 724
Score = 48 (22.0 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 286 QEKAILDGDCKKLSSLINENSKRRMDFLEKV 316
QE A+ + +KL S +NE +++ + EK+
Sbjct: 241 QEVAVYVQELQKLKSSVNELTQKNQNLTEKL 271
>MGI|MGI:1339711 [details] [associations]
symbol:Myh1 "myosin, heavy polypeptide 1, skeletal muscle,
adult" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005859 "muscle myosin
complex" evidence=ISO] [GO:0006936 "muscle contraction"
evidence=ISO] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0014704 "intercalated disc" evidence=IDA] [GO:0016459 "myosin
complex" evidence=IEA] [GO:0031672 "A band" evidence=IDA]
[GO:0032982 "myosin filament" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 MGI:MGI:1339711
GO:GO:0005524 GO:GO:0014704 GO:GO:0003774 eggNOG:COG5022
GO:GO:0031672 GO:GO:0005859 GO:GO:0032982 HOVERGEN:HBG004704
KO:K10352 InterPro:IPR015650 PANTHER:PTHR13140:SF22
HOGENOM:HOG000173959 CTD:4619 GeneTree:ENSGT00680000099790
OMA:QPTEEIS EMBL:AL596129 EMBL:BC108329 IPI:IPI00380896
RefSeq:NP_109604.1 UniGene:Mm.477065 ProteinModelPortal:Q5SX40
SMR:Q5SX40 IntAct:Q5SX40 STRING:Q5SX40 PhosphoSite:Q5SX40
PaxDb:Q5SX40 PRIDE:Q5SX40 Ensembl:ENSMUST00000018637
Ensembl:ENSMUST00000075734 Ensembl:ENSMUST00000124516 GeneID:17879
KEGG:mmu:17879 UCSC:uc007jmd.2 InParanoid:Q32P18 NextBio:292673
Bgee:Q5SX40 Genevestigator:Q5SX40 GermOnline:ENSMUSG00000056328
Uniprot:Q5SX40
Length = 1942
Score = 146 (56.5 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 69/314 (21%), Positives = 147/314 (46%)
Query: 644 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
+ ++R +EDE ++L+K+ +++ + + ++EK K EN + ++ +++ T
Sbjct: 943 LTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHAT-ENKVKNLTEEMAGLDETIAKLTK 1001
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-ELEFNLKQ 761
K + +A + + + N L + + S+E + KIR +LE ++
Sbjct: 1002 EKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDDLEGSLEQEKKIRMDLERAKRK 1061
Query: 762 HE---KLALQASLHYEDCKKEV-EHCRK---HLSDAKRQAESIAFITPELEKEFLEMPTT 814
E KLA ++++ E+ K+++ E +K +S+ + + E + +L+K+ E+
Sbjct: 1062 LEGDLKLAQESTMDVENDKQQLDEKLKKKEFEMSNLQSKIEDEQALGMQLQKKIKELQAR 1121
Query: 815 IEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEADKKE 863
IEELE I+ + S+A + ++ +E E ++E+ ++ K+EA+ ++
Sbjct: 1122 IEELEEEIEAERASRAKAEK-QRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQK 1180
Query: 864 LKRFLAEIDALKEKWLPTLR----NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFG 919
++R L E E TLR + VA++ E N Q + E E + + D
Sbjct: 1181 MRRDLEEATLQHEATAATLRKKHADSVAELGEQID-NLQRVKQKLEKEKSEMKMEIDDLA 1239
Query: 920 ILIKVKFRQSGQLE 933
++V + G LE
Sbjct: 1240 SNMEVISKSKGNLE 1253
Score = 46 (21.3 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 10/14 (71%), Positives = 12/14 (85%)
Query: 390 LQKSEKEKILNQNK 403
L+KSEKE+I QNK
Sbjct: 17 LRKSEKERIEAQNK 30
>UNIPROTKB|F1LRV9 [details] [associations]
symbol:Myh4 "Myosin-4" species:10116 "Rattus norvegicus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005859 "muscle myosin
complex" evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0014704 "intercalated disc" evidence=IEA] [GO:0031672 "A band"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 RGD:3139 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
KO:K10352 InterPro:IPR015650 PANTHER:PTHR13140:SF22 CTD:4619
OMA:QPTEEIS IPI:IPI00780102 RefSeq:NP_001128630.1 UniGene:Rn.224800
ProteinModelPortal:F1LRV9 PRIDE:F1LRV9 Ensembl:ENSRNOT00000004295
GeneID:287408 KEGG:rno:287408 NextBio:626038 ArrayExpress:F1LRV9
Uniprot:F1LRV9
Length = 1942
Score = 146 (56.5 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 69/314 (21%), Positives = 147/314 (46%)
Query: 644 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
+ ++R +EDE ++L+K+ +++ + + ++EK K EN + ++ +++ T
Sbjct: 943 LTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHAT-ENKVKNLTEEMAGLDETIAKLTK 1001
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-ELEFNLKQ 761
K + +A + + + N L + + S+E + KIR +LE ++
Sbjct: 1002 EKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDDLEGSLEQEKKIRMDLERAKRK 1061
Query: 762 HE---KLALQASLHYEDCKKEV-EHCRK---HLSDAKRQAESIAFITPELEKEFLEMPTT 814
E KLA ++++ E+ K+++ E +K +S+ + + E + +L+K+ E+
Sbjct: 1062 LEGDLKLAQESTMDVENDKQQLDEKLKKKEFEMSNLQSKIEDEQALGMQLQKKIKELQAR 1121
Query: 815 IEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEADKKE 863
IEELE I+ + S+A + ++ +E E ++E+ ++ K+EA+ ++
Sbjct: 1122 IEELEEEIEAERASRAKAEK-QRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQK 1180
Query: 864 LKRFLAEIDALKEKWLPTLR----NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFG 919
++R L E E TLR + VA++ E N Q + E E + + D
Sbjct: 1181 MRRDLEEATLQHEATAATLRKKHADSVAELGEQID-NLQRVKQKLEKEKSEMKMEIDDLA 1239
Query: 920 ILIKVKFRQSGQLE 933
++V + G LE
Sbjct: 1240 SNMEVISKSKGNLE 1253
Score = 46 (21.3 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 10/14 (71%), Positives = 12/14 (85%)
Query: 390 LQKSEKEKILNQNK 403
L+KSEKE+I QNK
Sbjct: 17 LRKSEKERIEAQNK 30
>UNIPROTKB|Q6UWE0 [details] [associations]
symbol:LRSAM1 "E3 ubiquitin-protein ligase LRSAM1"
species:9606 "Homo sapiens" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0070086 "ubiquitin-dependent endocytosis" evidence=IDA]
[GO:0044425 "membrane part" evidence=IDA] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0045806 "negative regulation
of endocytosis" evidence=IMP] [GO:0046755 "non-lytic virus budding"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR001611 InterPro:IPR001660
InterPro:IPR011510 InterPro:IPR016179 Pfam:PF07647 PROSITE:PS50089
PROSITE:PS50105 PROSITE:PS51450 SMART:SM00078 SMART:SM00184
SMART:SM00454 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0005576 GO:GO:0046872 GO:GO:0015031
GO:GO:0008270 eggNOG:COG4886 GO:GO:0030163 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0070086 GO:GO:0000209
InterPro:IPR025875 Pfam:PF12799 GO:GO:0051865 EMBL:AL445222
GO:GO:0045806 EMBL:AY358830 EMBL:AK056203 EMBL:AK056305
EMBL:AK091589 EMBL:BC009239 IPI:IPI00289113 IPI:IPI00300805
IPI:IPI00550437 RefSeq:NP_001005373.1 RefSeq:NP_001005374.1
RefSeq:NP_001177652.1 RefSeq:NP_612370.3 UniGene:Hs.495188
ProteinModelPortal:Q6UWE0 SMR:Q6UWE0 IntAct:Q6UWE0
MINT:MINT-1377718 STRING:Q6UWE0 PhosphoSite:Q6UWE0 DMDM:62511890
PaxDb:Q6UWE0 PRIDE:Q6UWE0 Ensembl:ENST00000300417
Ensembl:ENST00000323301 Ensembl:ENST00000373322
Ensembl:ENST00000373324 GeneID:90678 KEGG:hsa:90678 UCSC:uc004brb.2
UCSC:uc004bre.2 UCSC:uc010mxk.2 CTD:90678 GeneCards:GC09P130215
HGNC:HGNC:25135 HPA:HPA021403 HPA:HPA021844 MIM:610933 MIM:614436
neXtProt:NX_Q6UWE0 Orphanet:300319 PharmGKB:PA134890010
HOGENOM:HOG000231972 HOVERGEN:HBG052363 InParanoid:Q6UWE0 KO:K10641
OMA:FGAFATC PhylomeDB:Q6UWE0 ChiTaRS:LRSAM1 GenomeRNAi:90678
NextBio:76927 Bgee:Q6UWE0 CleanEx:HS_LRSAM1 Genevestigator:Q6UWE0
GermOnline:ENSG00000148356 GO:GO:0044425 GO:GO:0046755
Uniprot:Q6UWE0
Length = 723
Score = 119 (46.9 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 68/301 (22%), Positives = 139/301 (46%)
Query: 648 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLV 707
Q+L++D + QK+ EI+ ++ E R ME +++ + + ES+ + D + +A+ +++
Sbjct: 340 QKLLQDN--QRQKKSSEILKSLENE---RIRMEQLMSITQEETESLRRRD-VASAMQQML 393
Query: 708 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLAL 767
++ + Q Y + +NL+ + S E+ + + + + E
Sbjct: 394 TESCKNRLIQMAYESQRQNLVQQACSSMAEMDERFQQILSWQQMDQNKAISQILQESAMQ 453
Query: 768 QASLHYEDCKKEVEHCRKHLSDAKR-QAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 826
+A+ KK++ H R+ S K + E + EL+++ L+ E L+ I +
Sbjct: 454 KAAFEALQVKKDLMH-RQIRSQIKLIETELLQLTQLELKRKSLDT----ESLQEMISE-- 506
Query: 827 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR---FLAEIDAL-KEKWLPTL 882
Q ++ L Q +L+E + R+ ++ ++ T+ EA K E ++ +L + L +K L
Sbjct: 507 -QRWALSSLLQQLLKEKQQREEELREILTELEA-KSETRQENYWLIQYQRLLNQKPLSLK 564
Query: 883 -------RNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSG-QLEV 934
R LVA + E + ++ + +SLD S G L KV ++G Q E+
Sbjct: 565 LQEEGMERQLVALLEELSAEHYLPIFAHHRLSLDLL-SQMSP-GDLAKVGVSEAGLQHEI 622
Query: 935 L 935
L
Sbjct: 623 L 623
Score = 61 (26.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/103 (27%), Positives = 50/103 (48%)
Query: 152 QDRVCEFAKLSPVKLLE--ETEKAVGDPQLPVQHCALVEKSSKLKT-IECTVKRNGDTLN 208
Q+R ++ K K+LE E E+ + Q +H L+++SS K I TVK L
Sbjct: 250 QNRFSDYEKRKEQKMLEKLEFERRLELGQR--EHTQLLQQSSSQKDEILQTVKEEQSRLE 307
Query: 209 QLKALNVEQEK-DVERVRQRAELLEKVESMKKKLPWLKYDMKK 250
Q L+ Q + ER R + +L + +++ ++ L D ++
Sbjct: 308 Q--GLSEHQRHLNAERQRLQEQLKQTEQNISSRIQKLLQDNQR 348
Score = 60 (26.2 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 23/84 (27%), Positives = 40/84 (47%)
Query: 141 IQVNNLTQFLPQDRVCEFAKLSPVKLLEETEK---AVGDP--QLPVQHCALVEKSSKLKT 195
+ N+LT LP+ C L+ +K+L+ + A+ D QL VE++ ++
Sbjct: 62 VHTNHLTSLLPKS--CSLLSLATIKVLDLHDNQLTALPDDLGQLTALQVLNVERNQLMQ- 118
Query: 196 IECTVKRNGDTLNQLKALNVEQEK 219
+ R+ L QL+ LNV+ K
Sbjct: 119 ----LPRSIGNLTQLQTLNVKDNK 138
Score = 48 (22.0 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 371 IEKLG-SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN 429
+EKL + LELG + + + LQ+S +K ++ T+++ RL+ ++ + L+A R
Sbjct: 265 LEKLEFERRLELGQREHTQLLQQSSSQK--DEILQTVKEEQSRLEQGLSEHQRHLNAERQ 322
Query: 430 SGAENI 435
E +
Sbjct: 323 RLQEQL 328
Score = 44 (20.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 372 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQ 408
+ + S+I +L +Q NQ++ + SE K L ++ + Q
Sbjct: 333 QNISSRIQKL-LQDNQRQKKSSEILKSLENERIRMEQ 368
>UNIPROTKB|Q15643 [details] [associations]
symbol:TRIP11 "Thyroid receptor-interacting protein 11"
species:9606 "Homo sapiens" [GO:0000042 "protein targeting to
Golgi" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR000237 PROSITE:PS50913 GO:GO:0005634
GO:GO:0005794 GO:GO:0016020 GO:GO:0005856 GO:GO:0003713
GO:GO:0006366 eggNOG:NOG12793 EMBL:AL049872 GO:GO:0000042
EMBL:AF007217 EMBL:Y12490 EMBL:AF011368 EMBL:L40380 IPI:IPI00003515
PIR:T03719 RefSeq:NP_004230.2 UniGene:Hs.632339 UniGene:Hs.741740
ProteinModelPortal:Q15643 DIP:DIP-40357N IntAct:Q15643
MINT:MINT-2866314 STRING:Q15643 PhosphoSite:Q15643 DMDM:292495059
PaxDb:Q15643 PRIDE:Q15643 Ensembl:ENST00000267622 GeneID:9321
KEGG:hsa:9321 UCSC:uc001xzy.3 CTD:9321 GeneCards:GC14M092435
H-InvDB:HIX0202079 HGNC:HGNC:12305 HPA:HPA002570 MIM:200600
MIM:604505 neXtProt:NX_Q15643 Orphanet:93299 PharmGKB:PA36984
HOGENOM:HOG000168282 HOVERGEN:HBG079281 InParanoid:Q15643
OMA:IEAELCW OrthoDB:EOG4229HV PhylomeDB:Q15643 GenomeRNAi:9321
NextBio:34917 ArrayExpress:Q15643 Bgee:Q15643 CleanEx:HS_TRIP11
Genevestigator:Q15643 GermOnline:ENSG00000100815 Uniprot:Q15643
Length = 1979
Score = 126 (49.4 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 50/259 (19%), Positives = 122/259 (47%)
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDINTALAKLVD- 708
++++ Q+ER++++ ++ ++ + ++N + LR ++ S ++ + + L + D
Sbjct: 1535 MQEKTVVFQQERDQVMLALKQKQMENTALQNEVQRLRDKEFRSNQELERLRNHLLESEDS 1594
Query: 709 ---QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE-KHMASIEFDAKIRELEFNLKQHEK 764
+A ++ K ++ L ++VS + H AS++ ++ +L KQ ++
Sbjct: 1595 YTREALAAEDREAKLRKKVTVLEEKLVSSSNAMENASHQASVQVESLQEQLNVVSKQRDE 1654
Query: 765 LALQASLHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEKE---FLEMPTTIEELEA 820
ALQ S+ E K+ + + Q E A + ELEK+ E E LE
Sbjct: 1655 TALQLSVSQEQVKQYALSLANLQMVLEHFQQEEKAMYSAELEKQKQLIAEWKKNAENLEG 1714
Query: 821 ---AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 877
++Q+ + +AN+ + ++ + ++ QIE+L + E ++E+ +D +++K
Sbjct: 1715 KVISLQECLDEANAALDSASRLTEQLDVKEEQIEELKRQNEL-RQEM------LDDVQKK 1767
Query: 878 WLPTLRNLVAQINETFSRN 896
+ + ++++ RN
Sbjct: 1768 LMSLANSSEGKVDKVLMRN 1786
Score = 67 (28.6 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 39/171 (22%), Positives = 79/171 (46%)
Query: 99 GDTKEEHLTIMRKIDTRNKSEWFFNGKVV-PK--GEVLEITKRFNIQVNNLTQFLPQD-- 153
G KEE+ + +++ R + E V PK V E+ + Q+N + + L ++
Sbjct: 856 GSMKEENNHLQEELE-RLREEQSRTAPVADPKTLDSVTELASEVS-QLNTIKEHLEEEIK 913
Query: 154 ---RVCEFAKLSPVKLLE---ETEKAVGD-----PQLPVQHCAL-VEKSSKLKTIECTVK 201
++ E S ++LL+ E +K + + Q+ H L +EK ++K+++ T++
Sbjct: 914 HHQKIIEDQNQSKMQLLQSLQEQKKEMDEFRYQHEQMNATHTQLFLEKDEEIKSLQKTIE 973
Query: 202 RNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
Q+K E+ +D++ KV+S+ + K+D+ KAE
Sbjct: 974 -------QIKTQLHEERQDIQTDNSDIFQETKVQSLNIENGSEKHDLSKAE 1017
Score = 66 (28.3 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 25/110 (22%), Positives = 57/110 (51%)
Query: 142 QVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q+++ + PQ C A S V L E+ + + +L +L EK + ++T++
Sbjct: 1315 QLSSASLLTPQSAECLRASKSEV--LSESSELL-QQELEELRKSLQEKDATIRTLQENNH 1371
Query: 202 RNGDTL---NQLKALNVEQ-EKDVERVRQRAELLEKVESMKKKLPWLKYD 247
R D++ ++L+ EQ + ++++++++ ++L+K+ K L K D
Sbjct: 1372 RLSDSIAATSELERKEHEQTDSEIKQLKEKQDVLQKLLKEKDLLIKAKSD 1421
Score = 64 (27.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 47/195 (24%), Positives = 83/195 (42%)
Query: 370 KIEKLGSQILELGVQANQKRLQKSEKEKIL---NQNKLT--LRQCSDRLKDMEDKNNKLL 424
+I KL + I EL +Q+ + +L +Q KLT R+ + L D E++ +L
Sbjct: 210 EICKLQNIIKELKQNRSQEIDDHQHEMSVLQNAHQQKLTEISRRHREELSDYEERIEELE 269
Query: 425 HALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSF 484
+ L+ G+ + E +E+ K VL V + LED + K
Sbjct: 270 NLLQQGGS-GVIETDL---SKIYEMQKTIQ--VLQIEKVESTKKMEQLEDKIKDINKK-- 321
Query: 485 ITQDAGDRDFLAKNLKPFDVP---ILNYVSN---ESSRKEPFQI------SEEMRALGIS 532
++ DRD L + + +V I+ N E S+ +P + +E+ R L S
Sbjct: 322 LSSAENDRDILRREQEQLNVEKRQIMEECENLKLECSKLQPSAVKQSDTMTEKERILAQS 381
Query: 533 ARLDQVFDAPHAVKE 547
A +++VF A+ +
Sbjct: 382 ASVEEVFRLQQALSD 396
Score = 56 (24.8 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 32/132 (24%), Positives = 68/132 (51%)
Query: 380 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAY 439
EL VQ +K +Q E LN LT ++ D+++++ D+ NK + + EN+ E
Sbjct: 556 ELDVQ-KEKLIQS---EVALNDLHLTKQKLEDKVENLVDQLNKSQESNVSIQKENL-ELK 610
Query: 440 CWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWK-SFITQDAGDRDFLAKN 498
++Q+ EL++ L++ +++ +++N+ + + + + Q+ + + L +N
Sbjct: 611 EHIRQNEEELSR--IRNELMQ-SLNQDSNSNFKDTLLKEREAEVRNLKQNLSELEQLNEN 667
Query: 499 LKP--FDVPILN 508
LK FDV + N
Sbjct: 668 LKKVAFDVKMEN 679
Score = 50 (22.7 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 39/192 (20%), Positives = 78/192 (40%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL 161
K E M +++ + K N K+ +I +R Q+N + + ++ CE KL
Sbjct: 301 KVESTKKMEQLEDKIKD---INKKLSSAENDRDILRREQEQLNVEKRQIMEE--CENLKL 355
Query: 162 SPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQ---LKALNVEQE 218
KL AV + ++ +S+ ++ + + D N+ L +LN +
Sbjct: 356 ECSKL---QPSAVKQSDTMTEKERILAQSASVEEVFRLQQALSDAENEIMRLSSLNQDNS 412
Query: 219 --KDVERVRQRAELLEKVESM-KKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLH 275
+D +++ R E+LEK +S+ ++ L+ + K + LH
Sbjct: 413 LAEDNLKLKMRIEVLEKEKSLLSQEKEELQMSLLKLN--NEYEVIKSTATRDISLDSELH 470
Query: 276 EFSKPIEGKKQE 287
+ +E K+QE
Sbjct: 471 DLRLNLEAKEQE 482
Score = 48 (22.0 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 41/153 (26%), Positives = 65/153 (42%)
Query: 361 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN 420
+ +YE K++ G ++ + VQ + +L + K+ +L KL + S +L
Sbjct: 1271 IQSYEQNETKLKNFGQELAQ--VQHSIGQLCNT-KDLLLG--KLDI--ISPQLSSASLLT 1323
Query: 421 NKLLHALRNSGAENIFEAYCWLQQHRHELNK-----EAYGPVLLEVN--VSNRAHANYLE 473
+ LR S +E + E+ LQQ EL K +A L E N +S+ A
Sbjct: 1324 PQSAECLRASKSEVLSESSELLQQELEELRKSLQEKDATIRTLQENNHRLSDSIAATSEL 1383
Query: 474 DHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 506
+ H S I Q +D L K LK D+ I
Sbjct: 1384 ERKEHEQTDSEIKQLKEKQDVLQKLLKEKDLLI 1416
Score = 48 (22.0 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 211 KALNVEQEKDVERVRQRAELLEKVESMKKKL 241
K + V Q + VE ++ +L +K++ + KKL
Sbjct: 292 KTIQVLQIEKVESTKKMEQLEDKIKDINKKL 322
>UNIPROTKB|E1C8N6 [details] [associations]
symbol:EVI5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164 GO:GO:0005622
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00700000104071 OMA:KNSEMLA EMBL:AADN02012867
IPI:IPI00588249 Ensembl:ENSGALT00000009552 Uniprot:E1C8N6
Length = 715
Score = 125 (49.1 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 77/319 (24%), Positives = 141/319 (44%)
Query: 645 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTAL 703
Q E + + E +L K+R E + Q+ + + E EN+ L KR+L +I+++ D+ NT L
Sbjct: 382 QVEIKRLRTEN-RLLKQRIETLEKGQVTRAQEAE-ENY--LIKRELATIKQQSDEANTKL 437
Query: 704 AKLVDQAADLNIQQ------FKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 756
+ +L QQ +Y+ + + L E+V + S AE H A E K+ E+E
Sbjct: 438 EQAESTIRELQQQQQWHKCSSRYSEDFVLQLEKELVQARLSEAESHCALKEMQDKVLEME 497
Query: 757 ---FNLKQHEKLA-LQ-----ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE 807
+L E +A LQ L + ++ R+ + D + + T K+
Sbjct: 498 KRNSSLPDEENVARLQEELIAVKLREAEALMGLKELRQQVKDLEEHWQRHLARTTGRWKD 557
Query: 808 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 867
T+ EL QD + Q L+E + R ++E T+ + + L+R
Sbjct: 558 -PPRKNTVNEL----QDELMTVRLREAETQAELKETKQRMMEME---TQSQINNNHLRRA 609
Query: 868 LAEIDALKEK--WLPTLRN--LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIK 923
E+ +L+EK +L T +N L+AQ+NE R + + E + + D + +
Sbjct: 610 ELEVTSLQEKVQYL-TAQNKGLLAQLNEAKRRQAEIECKSKEEVMAARLREADSIAAVAE 668
Query: 924 VKFRQSGQLEVLSAHHQSG 942
++ + +LE+ + G
Sbjct: 669 LQ-QHIAELEIQPKQKEEG 686
Score = 57 (25.1 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 19/91 (20%), Positives = 44/91 (48%)
Query: 150 LPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQ 209
L Q E +L +L+ +K + Q L++ S ++K +K+
Sbjct: 315 LLQTNQAELLQLDMEGMLQHFQKVIPH-QFDSGPDKLIQASYQVKYNAKKMKKLEKEYTT 373
Query: 210 LKALNVEQEKDVERVRQRAELL-EKVESMKK 239
+K +E++ +++R+R LL +++E+++K
Sbjct: 374 IKTKEMEEQVEIKRLRTENRLLKQRIETLEK 404
>MGI|MGI:1915589 [details] [associations]
symbol:Ccdc88c "coiled-coil domain containing 88C"
species:10090 "Mus musculus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] [GO:0001932 "regulation of protein
phosphorylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0031648 "protein destabilization" evidence=IMP]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0051260
"protein homooligomerization" evidence=IPI] InterPro:IPR008636
Pfam:PF05622 MGI:MGI:1915589 GO:GO:0005737 GO:GO:0000226
GO:GO:0016055 GO:GO:0051260 HSSP:P01096 eggNOG:NOG12793
GO:GO:0001932 GO:GO:0031648 GeneTree:ENSGT00690000101702 CTD:440193
HOGENOM:HOG000112146 HOVERGEN:HBG057867 OMA:KEQHQSM
OrthoDB:EOG47M1X2 EMBL:AY339881 EMBL:AK137260 IPI:IPI00417106
IPI:IPI00844630 RefSeq:NP_080957.2 UniGene:Mm.156217
ProteinModelPortal:Q6VGS5 SMR:Q6VGS5 MINT:MINT-1890259
STRING:Q6VGS5 PhosphoSite:Q6VGS5 PaxDb:Q6VGS5 PRIDE:Q6VGS5
Ensembl:ENSMUST00000068411 Ensembl:ENSMUST00000085096 GeneID:68339
KEGG:mmu:68339 UCSC:uc007ote.1 NextBio:327021 Bgee:Q6VGS5
CleanEx:MM_CCDC88C Genevestigator:Q6VGS5 Uniprot:Q6VGS5
Length = 2009
Score = 121 (47.7 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 50/242 (20%), Positives = 102/242 (42%)
Query: 644 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDD-INTA 702
+Q E++L++++ L+ + + + +++ ++ H + + ++ E+ +++
Sbjct: 1060 LQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQ 1119
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYA-----EKHMASIEFDAKIRELEF 757
A L Q L QQ E + L + Y KH+ ++ ++ + E E
Sbjct: 1120 NAALSAQYTVLQSQQAAKEAEHEGLQQQQEQLAAVYEALLQDHKHLGTL-YECQSSEYEA 1178
Query: 758 NLKQHEKL-ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 816
++QH L L +L E KE+ L K + E + + E+E LE
Sbjct: 1179 LIRQHSCLKTLHRNLELEH--KELGERHGDLQQRKAELEELEKVL-STEREALEREQKTN 1235
Query: 817 ELEAAIQDNI-SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 875
+ + + + + I FL+Q + EYE ++L T + EL R+ D LK
Sbjct: 1236 AIATSENQRLRGELDRISFLHQQLKGEYEELHAHTKELKTSLNNSQLELSRWQVRFDELK 1295
Query: 876 EK 877
E+
Sbjct: 1296 EQ 1297
Score = 64 (27.6 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 28/121 (23%), Positives = 52/121 (42%)
Query: 183 HCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLP 242
H A+ E SKL +E ++ L + K EQ + +E+ R E ++ E + K++
Sbjct: 593 HQAVTEAGSKLSQLELEKQQLHRDLEEAKEKG-EQAEALEKELHRLE--KENEQLTKEVT 649
Query: 243 WLKYDMKKAEYIXXXXXXXXXXXXXXXXX-NTLHEFSKPIEGKKQEKAILDGDCKKLSSL 301
LK +K E + +TL S +EG +++K L + +L +
Sbjct: 650 SLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKM 709
Query: 302 I 302
+
Sbjct: 710 V 710
Score = 56 (24.8 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 369 DKIEKLGSQILELG--VQA----NQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 422
DK ++LG + LEL V+A + K Q + + L + K LR+ + LK + K+ +
Sbjct: 695 DK-QQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSER 753
Query: 423 LLHALRNSGAENI 435
L + ++ AEN+
Sbjct: 754 LELSYQSVSAENL 766
>DICTYBASE|DDB_G0272112 [details] [associations]
symbol:myoJ "myosin-5b" species:44689 "Dictyostelium
discoideum" [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0043531 "ADP binding" evidence=IDA] [GO:0042641 "actomyosin"
evidence=IDA] [GO:0033275 "actin-myosin filament sliding"
evidence=IDA] [GO:0030898 "actin-dependent ATPase activity"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0000331 "contractile vacuole" evidence=IEA;IDA] [GO:0000146
"microfilament motor activity" evidence=IDA] [GO:0016459 "myosin
complex" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002710 InterPro:IPR004009
Pfam:PF00063 Pfam:PF00612 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 PROSITE:PS51126 SMART:SM00015 SMART:SM00242
dictyBase:DDB_G0272112 GO:GO:0005524 GO:GO:0051015
GenomeReviews:CM000151_GR GO:GO:0043531 EMBL:AAFI02000008
GO:GO:0000146 GO:GO:0033275 GO:GO:0000331 InterPro:IPR018444
Pfam:PF01843 eggNOG:COG5022 GO:GO:0016459 GO:GO:0042641
GO:GO:0030898 EMBL:U42409 EMBL:L35322 PIR:T18278 RefSeq:XP_645195.1
ProteinModelPortal:P54697 EnsemblProtists:DDB0185050 GeneID:8618367
KEGG:ddi:DDB_G0272112 BindingDB:P54697 ChEMBL:CHEMBL1781867
Uniprot:P54697
Length = 2245
Score = 121 (47.7 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 75/339 (22%), Positives = 151/339 (44%)
Query: 670 QIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLL 728
Q+++ + R +E + +K+ + I+ E D++ L +L Q + Q E++ L
Sbjct: 1474 QMQQNQSR-IERELEEKKQHITRIDDERDELKKQLTQLQQQHEQSSTQLLLAQNELERLR 1532
Query: 729 VEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEV-EHCRKHL 787
+ + K E +F+ +I+ L K +LQ YE KK++ +
Sbjct: 1533 KKELKYKERGHETSKQQDQFNMEIQSLRITNNDQLK-SLQ---DYEQEKKKLKDKLSSSK 1588
Query: 788 SDAKRQAESIAFITPELE--KEFLE-MPTTIEELEAAIQDNISQANSIFFLNQNILQE-- 842
+A++Q ESI + EL K+ + + + +++ Q+ I ++++++ Q +LQ+
Sbjct: 1589 QEAQQQRESIIKMDAELSAIKQHSQWVENSFTDMKQRNQELI-ESSALY--KQQLLQQTS 1645
Query: 843 -----YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNF 897
+ ++ +I L + E ++L + E++++K+ Q+N+ N
Sbjct: 1646 TIDSTIKEKENEISKLQQQLETSNQQLHQLKEELNSMKQSNQLESTEQSKQLNQLIQENQ 1705
Query: 898 QEMAVAGEVS--LDEHESDFDKFGILIKVKFRQSGQLEV-LSAHHQSGGERSV----STI 950
Q +V E+S LD+ + K IK + +S ++ V L H G ++ + STI
Sbjct: 1706 QLKSVTNEISKQLDDAVFENQKINNTIKEQEIKSKRMSVELQQHIDEGKQQEIQQLQSTI 1765
Query: 951 LYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRA 989
L Q R+ EI Q M ER+ +LV +
Sbjct: 1766 AQLKQQQQSETD--RLEKEIQQ-MK--RERETQMKLVES 1799
Score = 75 (31.5 bits), Expect = 0.00059, Sum P(3) = 0.00059
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 368 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTL---RQCSDRL---KDMEDKNN 421
HD IEKL SQ E Q Q + Q E L++ L +Q DRL +D ++ NN
Sbjct: 1082 HDSIEKLQSQFNETEQQLQQFKQQSEELSSKLSKTTQQLDFNKQEFDRLSQERDTDNTNN 1141
Query: 422 KL-LHALRNSGAENIFEAYCWLQQHRHELNKE 452
+L + L+ + + + E Y L R L ++
Sbjct: 1142 QLEIQQLKKANS-TLEEDYFSLSGIRDNLERQ 1172
Score = 72 (30.4 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 41/174 (23%), Positives = 77/174 (44%)
Query: 141 IQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKT-IECT 199
++ L Q L Q++ + KLS KL E E QL ++ L + SKL+ ++ T
Sbjct: 1203 LEKQQLEQ-LVQEQSEQLIKLSSEKLGSEEEAKKQINQLELE---LTDHKSKLQIQLQLT 1258
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK----VESMKKKLPWLKYDMKKAEYIX 255
+ N + + +LK E + + ++++Q E +++ VE K L + K E
Sbjct: 1259 EQSN-EKIKKLKGKLEEYQDEKKQLQQELERIKQSKQSVEDEKNSLI-TQLTTVKFESTQ 1316
Query: 256 XXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQ-EKAILDGDCKKLSSLINENSKR 308
+T+ E +K I GK Q E+ D + +K+ +N+ ++
Sbjct: 1317 VSTNVSHQKEKITTLKSTIEELNKSI-GKLQAEQKNKDDEIRKIQFELNDQKQQ 1369
Score = 64 (27.6 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 57/264 (21%), Positives = 105/264 (39%)
Query: 168 EETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDT--LNQLKALNVEQEKD----- 220
+ E + + QL Q +SS+L+ EC K T L+ LN + EKD
Sbjct: 1023 DHLELQLSEIQLKYQELDKSNQSSQLQLSECLSKLEEQTQQLDHSSKLNKKLEKDLSDQH 1082
Query: 221 --VERVR-QRAELLEKVESMKKKLPWLKYDMKKA-EYIXXXXXXXXXXXXXXXXXNTLHE 276
+E+++ Q E ++++ K++ L + K + + NT ++
Sbjct: 1083 DSIEKLQSQFNETEQQLQQFKQQSEELSSKLSKTTQQLDFNKQEFDRLSQERDTDNTNNQ 1142
Query: 277 FSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDXXXXXXXXKYKXXXXXXXX 336
I+ K+ + L+ D LS I +N +R++ LE D K +
Sbjct: 1143 LE--IQQLKKANSTLEEDYFSLSG-IRDNLERQV--LELRDENQLI---KERLDSLGQQS 1194
Query: 337 XXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSE-K 395
L+ + + + EKLGS+ E Q NQ L+ ++ K
Sbjct: 1195 SQFQSGAALEKQQLEQLVQEQSEQLIKLSS-----EKLGSEE-EAKKQINQLELELTDHK 1248
Query: 396 EKILNQNKLTLRQCSDRLKDMEDK 419
K+ Q +LT Q ++++K ++ K
Sbjct: 1249 SKLQIQLQLT-EQSNEKIKKLKGK 1271
Score = 38 (18.4 bits), Expect = 0.00059, Sum P(3) = 0.00059
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 213 LNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
+N EK + Q E+ E +K+K+ W D
Sbjct: 502 INYANEKLQQLFNQHVFKEEQQEYIKEKIDWSYID 536
>RGD|3140 [details] [associations]
symbol:Myh9 "myosin, heavy chain 9, non-muscle" species:10116
"Rattus norvegicus" [GO:0000146 "microfilament motor activity"
evidence=ISO;ISS] [GO:0000212 "meiotic spindle organization"
evidence=ISO] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=ISO] [GO:0000910 "cytokinesis"
evidence=ISO;ISS] [GO:0001525 "angiogenesis" evidence=ISO;ISS]
[GO:0001701 "in utero embryonic development" evidence=ISO]
[GO:0001725 "stress fiber" evidence=ISO;ISS] [GO:0001726 "ruffle"
evidence=ISO;ISS] [GO:0001768 "establishment of T cell polarity"
evidence=ISO] [GO:0001931 "uropod" evidence=ISO] [GO:0003779 "actin
binding" evidence=ISO] [GO:0005391 "sodium:potassium-exchanging
ATPase activity" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS;IDA]
[GO:0005826 "actomyosin contractile ring" evidence=ISO;ISS]
[GO:0005829 "cytosol" evidence=ISO;ISS] [GO:0005886 "plasma membrane"
evidence=ISO;ISS] [GO:0005913 "cell-cell adherens junction"
evidence=ISO] [GO:0005938 "cell cortex" evidence=ISO] [GO:0006200
"ATP catabolic process" evidence=ISO;ISS] [GO:0006509 "membrane
protein ectodomain proteolysis" evidence=ISO;ISS] [GO:0006928
"cellular component movement" evidence=ISO] [GO:0007132 "meiotic
metaphase I" evidence=ISO] [GO:0007155 "cell adhesion" evidence=ISO]
[GO:0007520 "myoblast fusion" evidence=ISO] [GO:0008305 "integrin
complex" evidence=ISO;ISS] [GO:0008360 "regulation of cell shape"
evidence=ISO;ISS] [GO:0010524 "positive regulation of calcium ion
transport into cytosol" evidence=IMP] [GO:0015031 "protein transport"
evidence=ISO;ISS] [GO:0015629 "actin cytoskeleton" evidence=ISO;ISS]
[GO:0016328 "lateral plasma membrane" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=ISO] [GO:0016459 "myosin complex"
evidence=IEA;ISO] [GO:0016460 "myosin II complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO;ISS] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0030048 "actin filament-based
movement" evidence=ISO;ISS] [GO:0030220 "platelet formation"
evidence=ISO;ISS] [GO:0030224 "monocyte differentiation"
evidence=ISO;ISS] [GO:0030863 "cortical cytoskeleton" evidence=ISO]
[GO:0030898 "actin-dependent ATPase activity" evidence=ISO]
[GO:0031252 "cell leading edge" evidence=ISO;ISS] [GO:0031532 "actin
cytoskeleton reorganization" evidence=ISO;ISS] [GO:0031762
"follicle-stimulating hormone receptor binding" evidence=IDA]
[GO:0032154 "cleavage furrow" evidence=ISO;ISS] [GO:0032796 "uropod
organization" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO;ISS] [GO:0043234 "protein complex"
evidence=ISO;ISS;IDA] [GO:0043495 "protein anchor" evidence=ISO;ISS]
[GO:0043531 "ADP binding" evidence=ISO] [GO:0043534 "blood vessel
endothelial cell migration" evidence=ISO;ISS] [GO:0045807 "positive
regulation of endocytosis" evidence=IMP] [GO:0050766 "positive
regulation of phagocytosis" evidence=IMP] [GO:0051015 "actin filament
binding" evidence=ISO;ISS] [GO:0051295 "establishment of meiotic
spindle localization" evidence=ISO] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] [GO:0005768 "endosome" evidence=IDA]
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0001772
"immunological synapse" evidence=ISO] [GO:0005819 "spindle"
evidence=ISO] [GO:0008180 "signalosome" evidence=ISO] [GO:0031594
"neuromuscular junction" evidence=ISO] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063
Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 RGD:3140 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0043234 GO:GO:0042803 GO:GO:0005819 GO:GO:0008360
GO:GO:0030863 GO:GO:0015031 GO:GO:0001701 GO:GO:0031594 GO:GO:0051015
GO:GO:0043531 GO:GO:0001525 GO:GO:0005913 GO:GO:0000910 GO:GO:0031532
GO:GO:0050766 GO:GO:0000146 GO:GO:0001725 GO:GO:0001726 GO:GO:0043495
GO:GO:0016337 GO:GO:0005826 GO:GO:0006509 GO:GO:0007520 GO:GO:0043534
GO:GO:0016328 GO:GO:0010524 GO:GO:0008180 GO:GO:0032154 GO:GO:0030048
eggNOG:COG5022 GO:GO:0051295 GO:GO:0005391 GO:GO:0001772
GO:GO:0030224 GO:GO:0001768 GO:GO:0007132 GO:GO:0032796 GO:GO:0001931
GO:GO:0000212 GO:GO:0030220 GO:GO:0008305 GO:GO:0016460 GO:GO:0030898
HOGENOM:HOG000173958 HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1
CTD:4627 EMBL:U31463 IPI:IPI00209113 RefSeq:NP_037326.1
UniGene:Rn.11385 ProteinModelPortal:Q62812 SMR:Q62812 IntAct:Q62812
MINT:MINT-2778870 STRING:Q62812 PhosphoSite:Q62812 PRIDE:Q62812
GeneID:25745 KEGG:rno:25745 UCSC:RGD:3140 InParanoid:Q62812
NextBio:607917 ArrayExpress:Q62812 Genevestigator:Q62812
GermOnline:ENSRNOG00000004860 GO:GO:0031762 Uniprot:Q62812
Length = 1961
Score = 107 (42.7 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 74/348 (21%), Positives = 153/348 (43%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-EDDINTALAK 705
EQ E+E AK E++ Q+ K++ ME+ + + E+ + + D+ +
Sbjct: 1343 EQLEEEEEEAKRNLEKQIATLHAQVTDMKKK-MEDGVGCLETAEEAKRRLQKDLEGLSQR 1401
Query: 706 LVDQAADLN-IQQFKYAI--EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE-FNLKQ 761
L ++ A + +++ K + E+ +LLV++ + S + +FD + E + + K
Sbjct: 1402 LEEKVAAYDKLEKTKTRLQQELDDLLVDLDHQRQSVSNLEKKQKKFDQLLAEEKTISAKY 1461
Query: 762 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 821
E+ + E +KE K LS A+ E++ ELE+ + T +E+L ++
Sbjct: 1462 AEE---RDRAEAEAREKET----KALSLARALEEAMEQ-KAELERLNKQFRTEMEDLMSS 1513
Query: 822 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 881
D + + N+ + Q+ E + Q+E+L + +A + R + A+K ++
Sbjct: 1514 KDDVGKSVHELEKSNRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFE-- 1571
Query: 882 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQS 941
R+L + ++ + Q + E+ E E + + I + + + L+ L AH +
Sbjct: 1572 -RDLQGRDEQSEEKKKQLVRQVREMEA-ELEDERKQRSIAMAARKKLEMDLKDLEAHIDT 1629
Query: 942 GGERSVSTILYLVSLQ-DLTNCPFRVVDEINQGMDPI------NERKM 982
+ I L LQ + +C R VD+ + I NE+K+
Sbjct: 1630 ANKNREEAIKQLRKLQAQMKDC-MRDVDDTRASREEILAQAKENEKKL 1676
Score = 85 (35.0 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 39/159 (24%), Positives = 73/159 (45%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
+RGE + +K L+G EH + + F G+ V + E+ + + ++++
Sbjct: 1225 ERGELANEVKALLQGKGDSEHKRKKVEAQLQELQVKFSEGERV-RTELADKVSKLQVELD 1283
Query: 145 NLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNG 204
++T L Q + +KL+ K E + D Q +Q E KL ++ +K+
Sbjct: 1284 SVTGLLNQSD-SKSSKLT--KDFSALESQLQDTQELLQE----ENRQKL-SLSTKLKQME 1335
Query: 205 DTLNQLKALNVEQEKDVER--VRQRAELLEKVESMKKKL 241
D N + E+E++ +R +Q A L +V MKKK+
Sbjct: 1336 DEKNSFREQLEEEEEEAKRNLEKQIATLHAQVTDMKKKM 1374
>UNIPROTKB|Q9TV61 [details] [associations]
symbol:MYH1 "Myosin-1" species:9823 "Sus scrofa"
[GO:0030016 "myofibril" evidence=IEA] [GO:0032982 "myosin filament"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0030016 GO:GO:0003774 eggNOG:COG5022
GO:GO:0032982 HOVERGEN:HBG004704 KO:K10352 InterPro:IPR015650
PANTHER:PTHR13140:SF22 HOGENOM:HOG000173959 HSSP:P13538 CTD:4619
EMBL:AB025262 RefSeq:NP_001098421.1 UniGene:Ssc.15909
UniGene:Ssc.27020 UniGene:Ssc.94413 ProteinModelPortal:Q9TV61
SMR:Q9TV61 PRIDE:Q9TV61 GeneID:100125538 KEGG:ssc:100125538
Uniprot:Q9TV61
Length = 1939
Score = 145 (56.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 67/314 (21%), Positives = 147/314 (46%)
Query: 644 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 702
+ ++R +EDE ++L+K+ +++ + + ++EK K EN + ++ +++ T
Sbjct: 940 LTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHAT-ENKVKNLTEEMAGLDETIAKLTK 998
Query: 703 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-ELEFNLKQ 761
K + +A + + + N L + + + S+E + K+R +LE ++
Sbjct: 999 EKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRK 1058
Query: 762 HE---KLALQASLHYEDCKKEV-EHCRK---HLSDAKRQAESIAFITPELEKEFLEMPTT 814
E KLA ++++ E+ K+++ E +K +S+ + + E + +L+K+ E+
Sbjct: 1059 LEGDLKLAQESTMDIENDKQQLDEKLKKKEFEMSNLQSKIEDEQALAMQLQKKIKELQAR 1118
Query: 815 IEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEADKKE 863
IEELE I+ + S+A + ++ +E E ++E+ ++ K+EA+ ++
Sbjct: 1119 IEELEEEIEAERASRAKAEK-QRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQK 1177
Query: 864 LKRFLAEIDALKEKWLPTLR----NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFG 919
++R L E E TLR + VA++ E N Q + E E + + D
Sbjct: 1178 MRRDLEEATLQHEATAATLRKKHADSVAELGEQID-NLQRVKQKLEKEKSEMKMEIDDLA 1236
Query: 920 ILIKVKFRQSGQLE 933
++ + G LE
Sbjct: 1237 SNMETVSKAKGNLE 1250
Score = 46 (21.3 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 10/14 (71%), Positives = 12/14 (85%)
Query: 390 LQKSEKEKILNQNK 403
L+KSEKE+I QNK
Sbjct: 17 LRKSEKERIEAQNK 30
>UNIPROTKB|F6XPP6 [details] [associations]
symbol:GOLGB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
InterPro:IPR026202 GO:GO:0005794 InterPro:IPR009053 SUPFAM:SSF46579
GeneTree:ENSGT00700000104188 PANTHER:PTHR18887
Ensembl:ENSCAFT00000018446 EMBL:AAEX03017021 OMA:LYHNSQN
Uniprot:F6XPP6
Length = 3254
Score = 117 (46.2 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 65/275 (23%), Positives = 124/275 (45%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAK 705
+ + ++ E AKL+ + +E E+ K + + L + K + + KE + +N ++++
Sbjct: 2554 QNKELKSECAKLEGKLKEA------EEAKEDLWRSSLALEEEK-QGLSKEIESLNVSVSQ 2606
Query: 706 LVDQAADLNIQQ----FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 761
L Q L + F+ +++K V+ +S S ++K +I ELE L
Sbjct: 2607 LKRQLTALQEEGTLGIFQTQLKVKEEEVQKLSTTLSSSQK---------RITELEEELVH 2657
Query: 762 HEKLALQASLHYED-CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
+K A + ED KKE++H + + E+ EL ++ +EM + +
Sbjct: 2658 VQKEAAKKVGEIEDKLKKELKHLHHDAGIMRNETETAEERVAELARDLVEMEQKLLSVTK 2717
Query: 821 AIQDNISQANSIFFLNQNILQEY-EHRQRQIEDLSTKQEADKKELKRFLAEIDALK-EKW 878
+D +Q S F + + LQ +H + ++++L K +A KEL + L E L EK
Sbjct: 2718 ENKDLTAQIQS-FGRSMSSLQNSRDHAKEELDELKRKYDASLKELAQ-LREQGLLSTEK- 2774
Query: 879 LPTLRNLVA-QINETFSRNFQEMAVAGEVSLDEHE 912
TL + VA +N T + + + L + E
Sbjct: 2775 -DTLVSKVALSVNSTEDNSLPHLEKLNQQLLSKDE 2808
Score = 69 (29.3 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 393 SEKEKILNQNKLTLRQCSD---RLKDM-EDKNNKLLHALRNSGAENIFEAYCWLQQHRHE 448
+E ++ L +N+ C L+D+ EDK N L+ + + I E+ W ++H+ E
Sbjct: 1545 TEVDRSLMENQSLNGSCESLKLALEDLTEDKEN-LVKEIESLKCSKIAESTEWQEKHK-E 1602
Query: 449 LNKEAYGPVLLEV--NVSNRA 467
L KE Y +LL+ NVSN A
Sbjct: 1603 LQKE-Y-EILLQSYENVSNEA 1621
Score = 61 (26.5 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 31/116 (26%), Positives = 58/116 (50%)
Query: 129 KGEVLEITKR---FNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+ EVLE +R + ++ L+Q L Q + E AK+ +LL E ++ V Q +
Sbjct: 846 ENEVLEGAERVKDISNKMEELSQALSQKEL-EIAKMD--QLLLEKKRDVETLQQTI---- 898
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLK-ALNVEQEKDVERVRQRAELLEKVESMKKK 240
+EK ++ I ++ LN+ K +L VE ++ ++++ LL + E KK+
Sbjct: 899 -LEKDQQVTEISFSMTEKMVQLNEEKFSLGVE----IKTLKEQLNLLSRAEEAKKE 949
Score = 60 (26.2 bits), Expect = 0.00095, Sum P(4) = 0.00095
Identities = 26/105 (24%), Positives = 53/105 (50%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
E+ EI ++ +IQ+ + L ++R K+ +KL KA +L + + E
Sbjct: 62 ELKEIIRQKDIQLQQKDEVLQEERKAADNKIKKLKL---HAKA----KLTSLNKHIEEMK 114
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVE 235
++ T+ T + + L++ + E+E +VE+++Q+ L EK E
Sbjct: 115 AQGGTVLPTESHSEEQLSKHDKSSTEEEMEVEKIKQK--LQEKEE 157
Score = 38 (18.4 bits), Expect = 0.00095, Sum P(4) = 0.00095
Identities = 7/23 (30%), Positives = 16/23 (69%)
Query: 232 EKVESMKKKLPWLKYDMKKAEYI 254
+++E +K+++ L+ +KAE I
Sbjct: 686 DELERLKRQISELEISFRKAEEI 708
>UNIPROTKB|E2R6J1 [details] [associations]
symbol:GOLGB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
InterPro:IPR026202 GO:GO:0005794 InterPro:IPR009053 SUPFAM:SSF46579
PANTHER:PTHR18887 Ensembl:ENSCAFT00000018446 Uniprot:E2R6J1
Length = 3261
Score = 117 (46.2 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 65/275 (23%), Positives = 124/275 (45%)
Query: 647 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAK 705
+ + ++ E AKL+ + +E E+ K + + L + K + + KE + +N ++++
Sbjct: 2561 QNKELKSECAKLEGKLKEA------EEAKEDLWRSSLALEEEK-QGLSKEIESLNVSVSQ 2613
Query: 706 LVDQAADLNIQQ----FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 761
L Q L + F+ +++K V+ +S S ++K +I ELE L
Sbjct: 2614 LKRQLTALQEEGTLGIFQTQLKVKEEEVQKLSTTLSSSQK---------RITELEEELVH 2664
Query: 762 HEKLALQASLHYED-CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 820
+K A + ED KKE++H + + E+ EL ++ +EM + +
Sbjct: 2665 VQKEAAKKVGEIEDKLKKELKHLHHDAGIMRNETETAEERVAELARDLVEMEQKLLSVTK 2724
Query: 821 AIQDNISQANSIFFLNQNILQEY-EHRQRQIEDLSTKQEADKKELKRFLAEIDALK-EKW 878
+D +Q S F + + LQ +H + ++++L K +A KEL + L E L EK
Sbjct: 2725 ENKDLTAQIQS-FGRSMSSLQNSRDHAKEELDELKRKYDASLKELAQ-LREQGLLSTEK- 2781
Query: 879 LPTLRNLVA-QINETFSRNFQEMAVAGEVSLDEHE 912
TL + VA +N T + + + L + E
Sbjct: 2782 -DTLVSKVALSVNSTEDNSLPHLEKLNQQLLSKDE 2815
Score = 69 (29.3 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 393 SEKEKILNQNKLTLRQCSD---RLKDM-EDKNNKLLHALRNSGAENIFEAYCWLQQHRHE 448
+E ++ L +N+ C L+D+ EDK N L+ + + I E+ W ++H+ E
Sbjct: 1552 TEVDRSLMENQSLNGSCESLKLALEDLTEDKEN-LVKEIESLKCSKIAESTEWQEKHK-E 1609
Query: 449 LNKEAYGPVLLEV--NVSNRA 467
L KE Y +LL+ NVSN A
Sbjct: 1610 LQKE-Y-EILLQSYENVSNEA 1628
Score = 61 (26.5 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 31/116 (26%), Positives = 58/116 (50%)
Query: 129 KGEVLEITKR---FNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+ EVLE +R + ++ L+Q L Q + E AK+ +LL E ++ V Q +
Sbjct: 849 ENEVLEGAERVKDISNKMEELSQALSQKEL-EIAKMD--QLLLEKKRDVETLQQTI---- 901
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLK-ALNVEQEKDVERVRQRAELLEKVESMKKK 240
+EK ++ I ++ LN+ K +L VE ++ ++++ LL + E KK+
Sbjct: 902 -LEKDQQVTEISFSMTEKMVQLNEEKFSLGVE----IKTLKEQLNLLSRAEEAKKE 952
Score = 60 (26.2 bits), Expect = 0.00096, Sum P(4) = 0.00096
Identities = 26/105 (24%), Positives = 53/105 (50%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
E+ EI ++ +IQ+ + L ++R K+ +KL KA +L + + E
Sbjct: 62 ELKEIIRQKDIQLQQKDEVLQEERKAADNKIKKLKL---HAKA----KLTSLNKHIEEMK 114
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVE 235
++ T+ T + + L++ + E+E +VE+++Q+ L EK E
Sbjct: 115 AQGGTVLPTESHSEEQLSKHDKSSTEEEMEVEKIKQK--LQEKEE 157
Score = 38 (18.4 bits), Expect = 0.00096, Sum P(4) = 0.00096
Identities = 7/23 (30%), Positives = 16/23 (69%)
Query: 232 EKVESMKKKLPWLKYDMKKAEYI 254
+++E +K+++ L+ +KAE I
Sbjct: 689 DELERLKRQISELEISFRKAEEI 711
>UNIPROTKB|Q02224 [details] [associations]
symbol:CENPE "Centromere-associated protein E" species:9606
"Homo sapiens" [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0000940 "condensed chromosome outer kinetochore"
evidence=TAS] [GO:0000776 "kinetochore" evidence=IDA] [GO:0045860
"positive regulation of protein kinase activity" evidence=IMP]
[GO:0000779 "condensed chromosome, centromeric region"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051382 "kinetochore assembly" evidence=NAS] [GO:0003777
"microtubule motor activity" evidence=IMP] [GO:0005874
"microtubule" evidence=IDA] [GO:0043515 "kinetochore binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IMP] [GO:0000775
"chromosome, centromeric region" evidence=IDA] [GO:0007080 "mitotic
metaphase plate congression" evidence=TAS] [GO:0000089 "mitotic
metaphase" evidence=TAS] [GO:0007079 "mitotic chromosome movement
towards spindle pole" evidence=TAS] [GO:0000087 "M phase of mitotic
cell cycle" evidence=TAS] [GO:0000236 "mitotic prometaphase"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007018 "microtubule-based
movement" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0015630 "microtubule
cytoskeleton" evidence=IDA] Reactome:REACT_604 InterPro:IPR001752
InterPro:IPR019821 Pfam:PF00225 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 Reactome:REACT_6900 GO:GO:0005875
Reactome:REACT_115566 Reactome:REACT_21300 GO:GO:0000776
GO:GO:0051301 GO:GO:0005819 GO:GO:0019886 GO:GO:0007596
eggNOG:COG5059 GO:GO:0045860 EMBL:CH471057 GO:GO:0005874
GO:GO:0003777 GO:GO:0051382 Gene3D:3.40.850.10 GO:GO:0000236
GO:GO:0000779 GO:GO:0000777 GO:GO:0000089 GO:GO:0007080
GO:GO:0007079 EMBL:Z15005 EMBL:AB209996 EMBL:AC079919 EMBL:AK290362
IPI:IPI00296365 IPI:IPI00619925 IPI:IPI00868715 PIR:S28261
RefSeq:NP_001804.2 UniGene:Hs.75573 PDB:1T5C PDBsum:1T5C
ProteinModelPortal:Q02224 SMR:Q02224 IntAct:Q02224
MINT:MINT-5002721 STRING:Q02224 PhosphoSite:Q02224 DMDM:160358869
PaxDb:Q02224 PRIDE:Q02224 Ensembl:ENST00000265148
Ensembl:ENST00000380026 GeneID:1062 KEGG:hsa:1062 UCSC:uc003hxb.1
UCSC:uc003hxc.1 CTD:1062 GeneCards:GC04M104027 H-InvDB:HIX0031416
HGNC:HGNC:1856 HPA:HPA042294 MIM:117143 neXtProt:NX_Q02224
PharmGKB:PA26400 HOGENOM:HOG000111540 HOVERGEN:HBG097734
InParanoid:Q02224 KO:K11498 OMA:VKTWKER BindingDB:Q02224
ChEMBL:CHEMBL5870 EvolutionaryTrace:Q02224 GenomeRNAi:1062
NextBio:4442 ArrayExpress:Q02224 Bgee:Q02224 CleanEx:HS_CENPE
Genevestigator:Q02224 GO:GO:0043515 Uniprot:Q02224
Length = 2701
Score = 118 (46.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 87/381 (22%), Positives = 172/381 (45%)
Query: 653 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAAD 712
+E + KER+++ ++ + K +R +++ NLR+ +EK++++ K+V
Sbjct: 1679 EEMRSVTKERDDLRSVEETLKVERDQLKE--NLRETITRDLEKQEEL-----KIVH---- 1727
Query: 713 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLH 772
+++++ + I+ L IVS K + +E + + +LK E+L + A +H
Sbjct: 1728 MHLKEHQETID---KLRGIVSEKTNEISNMQKDLEHSNDALKAQ-DLKIQEELRI-AHMH 1782
Query: 773 YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI 832
++ ++ ++ R +S+ + + ++ + +LE ++ I+EL+A I+ +
Sbjct: 1783 LKEQQETIDKLRGIVSE---KTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDV 1839
Query: 833 FFLNQNILQEYEHRQRQIEDLS---TKQE------ADK-----KELKRFLAEIDALK--E 876
+ + E E ++QI+D S +K E A K +E+K + E D L+ E
Sbjct: 1840 NETQKKV-SEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVE 1898
Query: 877 KWLPTLRN-LVAQINETFSRNF---QEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQL 932
+ L R+ L + ET +R+ QE+ A +S EH+ DK I K Q +
Sbjct: 1899 ETLKLERDQLKESLQETKARDLEIQQELKTARMLS-KEHKETVDKLREKISEKTIQISDI 1957
Query: 933 EVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS- 991
+ + ++ + L LQ L RV +++N INE + ++ A +
Sbjct: 1958 QKDLDKSKDELQKKIQE-LQKKELQLL-----RVKEDVNMSHKKINEMEQLKKQFEAQNL 2011
Query: 992 --QPNTPQCFLLTPKLLPDLE 1010
Q F LT KL LE
Sbjct: 2012 SMQSVRMDNFQLTKKLHESLE 2032
Score = 76 (31.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 98/497 (19%), Positives = 193/497 (38%)
Query: 99 GDTKEEHLTIMRKIDTRNKSEWFFNGKV---VPKGEVLEITKR-FN-IQVNNLTQFLPQD 153
G+TK+E M ID + E + V E++E ++ F+ IQ N Q + +
Sbjct: 1002 GETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLES 1061
Query: 154 RVCEFAKLSP-----VKL-LEETE--KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGD 205
+ E +L +++ +E E + +GD Q EK+ +K E + R D
Sbjct: 1062 VIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKK-EGELSRTCD 1120
Query: 206 TLNQLKALNVEQEKDV-ERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXX 264
L +++ E+ + + E+ +Q + E++ M+KK+ ++ ++K E
Sbjct: 1121 RLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIE-NLKN-ELKNKELTLEHME 1178
Query: 265 XXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDXXXXXXX 324
L+E + ++ +E+ +L K+L ++ +++
Sbjct: 1179 TERLELAQKLNENYEEVKSITKERKVL----KELQKSFETERDHLRGYIREIEATGLQTK 1234
Query: 325 XKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKI-EKLGSQILELGV 383
+ K + ++ Q + E H K+ E++ E +
Sbjct: 1235 EELKIAHIHLKEHQETIDELRRSVSEKTAQIINTQDL---EKSHTKLQEEIPVLHEEQEL 1291
Query: 384 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR-NSGAENIFEAYCWL 442
N K + SE ++ +N+ +L Q + KD + LR N + E L
Sbjct: 1292 LPNVKEV--SETQETMNELELLTEQSTT--KDSTTLARIEMERLRLNEKFQESQEEIKSL 1347
Query: 443 QQHRHELN--KEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLK 500
+ R L KEA LEV H + L++H+ + K Q++ + + N+K
Sbjct: 1348 TKERDNLKTIKEA-----LEVK-----H-DQLKEHIRETLAK---IQESQSKQEQSLNMK 1393
Query: 501 PFDVPILNYVSN--ESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSS 558
D VS + K+ + E+ LG+S RL + D +V + L
Sbjct: 1394 EKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQE- 1452
Query: 559 YIGSKETDQKADNVAKL 575
+ E+DQ +N+ ++
Sbjct: 1453 -VLQSESDQLKENIKEI 1468
>RGD|1586166 [details] [associations]
symbol:Trip11 "thyroid hormone receptor interactor 11"
species:10116 "Rattus norvegicus" [GO:0000042 "protein targeting to
Golgi" evidence=IEA] [GO:0003281 "ventricular septum development"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] InterPro:IPR000237
PROSITE:PS50913 RGD:1586166 RGD:2594 GO:GO:0000042 IPI:IPI00563168
Ensembl:ENSRNOT00000048536 ArrayExpress:F1M6T4 Uniprot:F1M6T4
Length = 461
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 81/364 (22%), Positives = 150/364 (41%)
Query: 653 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES--IEKEDDINTALAKLVDQA 710
D+ K+++ + +Q E ++ R+ E +N ++L +E ED D+
Sbjct: 29 DQVMLALKQKQMETSTLQNEVQRLRDKEARLNQELQRLRDHLLESEDSHTREALAAEDRE 88
Query: 711 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS 770
A L K ++ LV S H AS++ ++ +L KQ ++ ALQ S
Sbjct: 89 AKLR----KKVSVLEEKLVS--SSNAMENASHQASVQVESLQEQLNMVSKQRDETALQLS 142
Query: 771 LHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEKE---FLEMPTTIEELEA---AIQ 823
+ E K+ + + Q E A + ELEK+ E E LE ++Q
Sbjct: 143 VSQEQVKQYAMSLTNLQMVLEHFQQEEKAMYSAELEKQNQLLTEWKKKAESLEGKVLSLQ 202
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 883
+ + +AN+ + ++ + ++ QIE+L + E ++ L DA K K + +
Sbjct: 203 ERLDEANAALDSASRLTEQLDLKEEQIEELKKQNELHQEMLD------DAQK-KLMSLVN 255
Query: 884 NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGG 943
+ ++++ RN + HE G ++ VK R+ ++E L A Q G
Sbjct: 256 STEGKVDKVLMRNLF-IGHFHTPKNQRHEV-LRLMGSILGVK-RE--EMEQLFAEDQGGV 310
Query: 944 ERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTP 1003
R ++ L S + + N P R Q + + ++F + + S P+ P L
Sbjct: 311 TRWMAGWLGGGS-KSVPNTPLR---PNQQSVFNSSFSELFVKFLETESHPSVPPPKLSVH 366
Query: 1004 KLLP 1007
L P
Sbjct: 367 DLKP 370
>RGD|71000 [details] [associations]
symbol:Myh10 "myosin, heavy chain 10, non-muscle" species:10116
"Rattus norvegicus" [GO:0000146 "microfilament motor activity"
evidence=ISO] [GO:0000281 "cytokinesis after mitosis" evidence=ISO]
[GO:0001701 "in utero embryonic development" evidence=ISO]
[GO:0001725 "stress fiber" evidence=ISO] [GO:0001764 "neuron
migration" evidence=ISO] [GO:0001778 "plasma membrane repair"
evidence=ISO] [GO:0003774 "motor activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005938 "cell cortex"
evidence=ISO] [GO:0006887 "exocytosis" evidence=ISO] [GO:0006928
"cellular component movement" evidence=NAS] [GO:0006930
"substrate-dependent cell migration, cell extension" evidence=ISO]
[GO:0007097 "nuclear migration" evidence=ISO] [GO:0007409
"axonogenesis" evidence=ISO] [GO:0007411 "axon guidance"
evidence=ISO] [GO:0007420 "brain development" evidence=ISO]
[GO:0007512 "adult heart development" evidence=ISO] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0008360 "regulation of cell
shape" evidence=IEA;ISO] [GO:0016459 "myosin complex"
evidence=IEA;ISO] [GO:0016460 "myosin II complex" evidence=ISO]
[GO:0021592 "fourth ventricle development" evidence=ISO] [GO:0021670
"lateral ventricle development" evidence=ISO] [GO:0021678 "third
ventricle development" evidence=ISO] [GO:0021680 "cerebellar
Purkinje cell layer development" evidence=ISO] [GO:0030036 "actin
cytoskeleton organization" evidence=ISO] [GO:0030048 "actin
filament-based movement" evidence=ISO] [GO:0030239 "myofibril
assembly" evidence=ISO] [GO:0030424 "axon" evidence=ISO] [GO:0030426
"growth cone" evidence=ISO] [GO:0030496 "midbody" evidence=ISO]
[GO:0030898 "actin-dependent ATPase activity" evidence=ISO]
[GO:0031175 "neuron projection development" evidence=ISO]
[GO:0032154 "cleavage furrow" evidence=ISO] [GO:0043005 "neuron
projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043531 "ADP binding" evidence=ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=ISO] [GO:0051015 "actin
filament binding" evidence=IEA;ISO] [GO:0055003 "cardiac myofibril
assembly" evidence=ISO] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=ISO] [GO:0060041 "retina development in
camera-type eye" evidence=ISO] [GO:0005819 "spindle" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0031594
"neuromuscular junction" evidence=ISO] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 RGD:71000 GO:GO:0005886 GO:GO:0005524 GO:GO:0005938
GO:GO:0007411 GO:GO:0001764 GO:GO:0005819 GO:GO:0008360
GO:GO:0008283 GO:GO:0030424 GO:GO:0043025 GO:GO:0001701
GO:GO:0043197 GO:GO:0031594 GO:GO:0050885 GO:GO:0043531
GO:GO:0006928 GO:GO:0030426 GO:GO:0060041 GO:GO:0000281
GO:GO:0000146 GO:GO:0001725 GO:GO:0055003 GO:GO:0006887
GO:GO:0007512 GO:GO:0030496 GO:GO:0032154 GO:GO:0030048
GO:GO:0021670 GO:GO:0007097 eggNOG:COG5022 GO:GO:0055015
GO:GO:0021680 GO:GO:0001778 GO:GO:0006930 GO:GO:0021678
GO:GO:0021592 GO:GO:0016460 GO:GO:0030898 CTD:4628
HOGENOM:HOG000173958 HOVERGEN:HBG004704 KO:K10352 SUPFAM:SSF50084
EMBL:AF139055 IPI:IPI00949586 RefSeq:NP_113708.1 UniGene:Rn.98166
ProteinModelPortal:Q9JLT0 SMR:Q9JLT0 STRING:Q9JLT0
PhosphoSite:Q9JLT0 PRIDE:Q9JLT0 GeneID:79433 KEGG:rno:79433
UCSC:RGD:71000 InParanoid:Q9JLT0 NextBio:614799 ArrayExpress:Q9JLT0
Genevestigator:Q9JLT0 GermOnline:ENSRNOG00000002886 Uniprot:Q9JLT0
Length = 1976
Score = 138 (53.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 145/747 (19%), Positives = 283/747 (37%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
EK+S+ K K+ D +L+AL E E ++ + EL K E +L
Sbjct: 1130 EKASRNKA----EKQKRDLSEELEALKTELEDTLDTTAAQQELRTKREQEVAEL------ 1179
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
KKA L E S+ +E K+ KA L+ K L +N +
Sbjct: 1180 -KKALEDETKNHEAQIQDMRQRHATALEELSEQLEQAKRFKANLE---KNKQGLETDNKE 1235
Query: 308 RRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQT-VPAYEP 366
+ ++ + K K + R Q +
Sbjct: 1236 LACE-VKVLQQVKAESEHKRKKLDAQVQELHAKVSEGDRLRVELAEKANKLQNELDNVST 1294
Query: 367 PHDKIEKLGSQILE--LGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
++ EK G + + G+++ + Q+ +E+ + KL L S R++ +E++ N L
Sbjct: 1295 LLEEAEKKGMKFAKDAAGLESQLQDTQELLQEE--TRQKLNL---SSRIRQLEEEKNSLQ 1349
Query: 425 HALRNS--GAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLED--HVGHYI 480
+N+ + LQ + K+ L + A L+D + +
Sbjct: 1350 EQQEEEEEARKNLEKQVLALQSQLADTKKKVDDD-LGTIEGLEEAKKKLLKDVEALSQRL 1408
Query: 481 WKSFITQDAGDR--DFLAKNLKPFDVPI---LNYVSNESSRKEPF-QISEEMRALGISAR 534
+ + D ++ + L + L V + VSN +++ F Q+ E + GISAR
Sbjct: 1409 EEKVLAYDKLEKTKNRLQQELDDLTVDLDHQRQIVSNLEKKQKKFDQLLAEEK--GISAR 1466
Query: 535 LDQVFDAPHA-VKEVLISQFGLDSSY---IGSKETDQKADNVAKLGILDFWTPENHYRWS 590
+ D A +E L + + +KE ++ + + + D + ++ +
Sbjct: 1467 YAEERDRAEAEAREKETKALSLARALEEALEAKEEFERQNKQLRADMEDLMSSKDDVGKN 1526
Query: 591 ISRYGGHVSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRL 650
+ A + V + R L ++ +QT
Sbjct: 1527 VHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQ 1586
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQ 709
E++ L K+ E+ ++ E+++R + L+ +E + + N A +++ Q
Sbjct: 1587 NEEKKRLLLKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQ 1646
Query: 710 AADLNIQQFKYAIEIKNLLV--EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLAL 767
L Q Y E++ + + + +EK + S+E A+I +L+ L E+
Sbjct: 1647 LRKLQAQMKDYQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSERARR 1704
Query: 768 QASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQ 823
A ++ E+ + + L D KR+ E+ IA + ELE+E + +E L +
Sbjct: 1705 HAEQERDELADEIANSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLNDRFR 1760
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKWLPTL 882
Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+ T+
Sbjct: 1761 KTTLQVDT---LNTELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKFKATI 1816
Query: 883 RNL---VAQINETFSRNFQEMAVAGEV 906
L + Q+ E + +E A A ++
Sbjct: 1817 SALEAKIGQLEEQLEQEAKERAAANKL 1843
Score = 115 (45.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 52/216 (24%), Positives = 96/216 (44%)
Query: 654 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 711
++A L ++R I Q+E+ E N L R ++ + D +NT LA + Q +
Sbjct: 1724 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNTELAAERSAAQKS 1783
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 770
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1784 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1841
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 830
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1842 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1897
Query: 831 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
+ + + +E + E LS + K L+R
Sbjct: 1898 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1930
Score = 76 (31.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 42/153 (27%), Positives = 60/153 (39%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + E LE KRF +
Sbjct: 1171 KREQEVAELKKALEDETKNHEAQIQ---DMRQRHATALE----ELSEQLEQAKRFKANLE 1223
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1224 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1281
Query: 202 RNG--DTLNQLKALNVEQEKDVERVRQRAELLE 232
N + L+ + L E EK + + A LE
Sbjct: 1282 ANKLQNELDNVSTLLEEAEKKGMKFAKDAAGLE 1314
Score = 47 (21.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 31/150 (20%), Positives = 69/150 (46%)
Query: 102 KEEHLTIMRKIDTR-----NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
K+E I+ +++R +++ N K + + ++ ++ + + Q L ++V
Sbjct: 917 KQELEEILHDLESRVEGEEERNQILQNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVT 975
Query: 157 EFAKLSPVK----LLEE-TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
AK+ ++ LLE+ K + + +L A E SS+L E K N+ +
Sbjct: 976 AEAKIKKMEEEVLLLEDQNSKFIKEKKLMEDRIA--ECSSQLAEEEEKAKNLAKIRNKQE 1033
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + E ER+++ + +++E K+KL
Sbjct: 1034 VMISDLE---ERLKKEEKTRQELEKAKRKL 1060
>UNIPROTKB|G3V9Y1 [details] [associations]
symbol:Myh10 "Myosin-10" species:10116 "Rattus norvegicus"
[GO:0000146 "microfilament motor activity" evidence=IEA]
[GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001725 "stress
fiber" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001778 "plasma membrane repair" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA]
[GO:0006930 "substrate-dependent cell migration, cell extension"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007512 "adult heart
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0016460 "myosin II complex" evidence=IEA] [GO:0021592 "fourth
ventricle development" evidence=IEA] [GO:0021670 "lateral ventricle
development" evidence=IEA] [GO:0021678 "third ventricle
development" evidence=IEA] [GO:0021680 "cerebellar Purkinje cell
layer development" evidence=IEA] [GO:0030048 "actin filament-based
movement" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] [GO:0030898 "actin-dependent ATPase activity"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0032154 "cleavage furrow" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0043197 "dendritic spine"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0055003
"cardiac myofibril assembly" evidence=IEA] [GO:0055015 "ventricular
cardiac muscle cell development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 RGD:71000 GO:GO:0005524 EMBL:CH473948 GO:GO:0003774
GO:GO:0016459 GeneTree:ENSGT00650000092896 SUPFAM:SSF50084
UniGene:Rn.98166 ProteinModelPortal:G3V9Y1
Ensembl:ENSRNOT00000065895 Uniprot:G3V9Y1
Length = 1976
Score = 138 (53.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 145/747 (19%), Positives = 283/747 (37%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
EK+S+ K K+ D +L+AL E E ++ + EL K E +L
Sbjct: 1130 EKASRNKA----EKQKRDLSEELEALKTELEDTLDTTAAQQELRTKREQEVAEL------ 1179
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
KKA L E S+ +E K+ KA L+ K L +N +
Sbjct: 1180 -KKALEDETKNHEAQIQDMRQRHATALEELSEQLEQAKRFKANLE---KNKQGLETDNKE 1235
Query: 308 RRMDFLEKVDXXXXXXXXKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQT-VPAYEP 366
+ ++ + K K + R Q +
Sbjct: 1236 LACE-VKVLQQVKAESEHKRKKLDAQVQELHAKVSEGDRLRVELAEKANKLQNELDNVST 1294
Query: 367 PHDKIEKLGSQILE--LGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 424
++ EK G + + G+++ + Q+ +E+ + KL L S R++ +E++ N L
Sbjct: 1295 LLEEAEKKGMKFAKDAAGLESQLQDTQELLQEE--TRQKLNL---SSRIRQLEEEKNSLQ 1349
Query: 425 HALRNS--GAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLED--HVGHYI 480
+N+ + LQ + K+ L + A L+D + +
Sbjct: 1350 EQQEEEEEARKNLEKQVLALQSQLADTKKKVDDD-LGTIEGLEEAKKKLLKDVEALSQRL 1408
Query: 481 WKSFITQDAGDR--DFLAKNLKPFDVPI---LNYVSNESSRKEPF-QISEEMRALGISAR 534
+ + D ++ + L + L V + VSN +++ F Q+ E + GISAR
Sbjct: 1409 EEKVLAYDKLEKTKNRLQQELDDLTVDLDHQRQIVSNLEKKQKKFDQLLAEEK--GISAR 1466
Query: 535 LDQVFDAPHA-VKEVLISQFGLDSSY---IGSKETDQKADNVAKLGILDFWTPENHYRWS 590
+ D A +E L + + +KE ++ + + + D + ++ +
Sbjct: 1467 YAEERDRAEAEAREKETKALSLARALEEALEAKEEFERQNKQLRADMEDLMSSKDDVGKN 1526
Query: 591 ISRYGGHVSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRL 650
+ A + V + R L ++ +QT
Sbjct: 1527 VHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQ 1586
Query: 651 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQ 709
E++ L K+ E+ ++ E+++R + L+ +E + + N A +++ Q
Sbjct: 1587 NEEKKRLLLKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQ 1646
Query: 710 AADLNIQQFKYAIEIKNLLV--EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLAL 767
L Q Y E++ + + + +EK + S+E A+I +L+ L E+
Sbjct: 1647 LRKLQAQMKDYQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSERARR 1704
Query: 768 QASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQ 823
A ++ E+ + + L D KR+ E+ IA + ELE+E + +E L +
Sbjct: 1705 HAEQERDELADEIANSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLNDRFR 1760
Query: 824 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKWLPTL 882
Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+ T+
Sbjct: 1761 KTTLQVDT---LNTELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKFKATI 1816
Query: 883 RNL---VAQINETFSRNFQEMAVAGEV 906
L + Q+ E + +E A A ++
Sbjct: 1817 SALEAKIGQLEEQLEQEAKERAAANKL 1843
Score = 115 (45.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 52/216 (24%), Positives = 96/216 (44%)
Query: 654 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 711
++A L ++R I Q+E+ E N L R ++ + D +NT LA + Q +
Sbjct: 1724 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNTELAAERSAAQKS 1783
Query: 712 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 770
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1784 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1841
Query: 771 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 830
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1842 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1897
Query: 831 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 866
+ + + +E + E LS + K L+R
Sbjct: 1898 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1930
Score = 76 (31.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 42/153 (27%), Positives = 60/153 (39%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + E LE KRF +
Sbjct: 1171 KREQEVAELKKALEDETKNHEAQIQ---DMRQRHATALE----ELSEQLEQAKRFKANLE 1223
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1224 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1281
Query: 202 RNG--DTLNQLKALNVEQEKDVERVRQRAELLE 232
N + L+ + L E EK + + A LE
Sbjct: 1282 ANKLQNELDNVSTLLEEAEKKGMKFAKDAAGLE 1314
Score = 47 (21.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 31/150 (20%), Positives = 69/150 (46%)
Query: 102 KEEHLTIMRKIDTR-----NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
K+E I+ +++R +++ N K + + ++ ++ + + Q L ++V
Sbjct: 917 KQELEEILHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVT 975
Query: 157 EFAKLSPVK----LLEE-TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
AK+ ++ LLE+ K + + +L A E SS+L E K N+ +
Sbjct: 976 AEAKIKKMEEEVLLLEDQNSKFIKEKKLMEDRIA--ECSSQLAEEEEKAKNLAKIRNKQE 1033
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + E ER+++ + +++E K+KL
Sbjct: 1034 VMISDLE---ERLKKEEKTRQELEKAKRKL 1060
>UNIPROTKB|F1PDF4 [details] [associations]
symbol:MYH7 "Myosin-7" species:9615 "Canis lupus
familiaris" [GO:0016459 "myosin complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003774 "motor activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF01576 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00680000099788
EMBL:AAEX03005612 Ensembl:ENSCAFT00000018439 Uniprot:F1PDF4
Length = 1659
Score = 130 (50.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 80/375 (21%), Positives = 166/375 (44%)
Query: 644 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHI-NLRKRKL---ESIEKEDD 698
+ ++R +EDE ++L+++ +++ + + ++EK K EN + NL + E I K
Sbjct: 659 LTAKKRKLEDECSELKRDIDDLELTLAKVEKEKHAT-ENKVKNLTEEMAGLDEIIAKLTK 717
Query: 699 INTALAKLVDQAAD-LNIQQFKYAIEIK---NLLVEIVSCKWSYAEKHMASIEFDAKIRE 754
AL + QA D L ++ K K L ++ + S ++ ++ + R+
Sbjct: 718 EKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRK 777
Query: 755 LEFNLKQHEKLALQASLHYEDCKKEV-EHCRK---HLSDAKRQAESIAFITPELEKEFLE 810
LE +LK L ++ + E+ K+++ E +K L+ + E + +L+K+ E
Sbjct: 778 LEGDLK----LTQESIMDLENDKQQLDERLKKKDFELNALNARIEDEQALGSQLQKKLKE 833
Query: 811 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEAD 860
+ IEELE ++ + + L ++ +E E ++E+ ++ K+EA+
Sbjct: 834 LQARIEELEEELEAERTARAKVEKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREAE 893
Query: 861 KKELKRFLAEIDALKEKWLPTLR----NLVAQINETFSRNFQEMAVAGEVSLDEHESDFD 916
++++R L E E LR + VA++ E N Q + E E + + D
Sbjct: 894 FQKMRRDLEEATLQHEATAAALRKKHADSVAELGEQID-NLQRVKQKLEKEKSEFKLELD 952
Query: 917 KFGILIKVKFRQSGQLEVL--SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGM 974
++ + LE + + Q RS + S+ DLT+ ++ E +
Sbjct: 953 DVTSNMEQIIKAKANLEKMCRTLEDQMNEHRSKAEETQR-SVNDLTSQRAKLQTENGELS 1011
Query: 975 DPINERK-MFQQLVR 988
++E++ + QL R
Sbjct: 1012 RQLDEKEALISQLTR 1026
Score = 59 (25.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 379 LELGVQANQKRLQKSEKE-KILNQNKLTL----RQCSDRLKDMEDKNNKL 423
L+L VQA Q L +E+ L +NK+ L ++ ++RL+D E+ N +L
Sbjct: 610 LQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMTERLEDEEEMNAEL 659
WARNING: HSPs involving 144 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1051 976 0.00097 122 3 11 22 0.42 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 394
No. of states in DFA: 626 (67 KB)
Total size of DFA: 455 KB (2215 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 116.03u 0.11s 116.14t Elapsed: 00:00:10
Total cpu time: 116.25u 0.11s 116.36t Elapsed: 00:00:13
Start: Tue May 21 04:46:16 2013 End: Tue May 21 04:46:29 2013
WARNINGS ISSUED: 2